Pregenerated sensors for BUB1B (Homo sapiens)
Ensembl gene IDs: ENSG00000156970Ensembl transcript IDs: ENST00000287598.11, ENST00000412359.7, ENST00000557848.1, ENST00000558151.1, ENST00000558715.5, ENST00000559414.5, ENST00000559461.1, ENST00000559733.5, ENST00000559772.1, ENST00000560120.5
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTTGGATTTCTTTTAGCTTCTTCTCCATCTCTTCAATCTGTTTCTaGATTTCTGCTCTCTTCTCTGCACTGGTCAATAGCTCGGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: VWISFSFFSISSICF*ISALFSALVNSSAS Trigger: GGAAGCCGAGCTATTGACCAGTGCAGAGAAGAGAGCAGAAATGCAGAAACAGATTGAAGAGATGGAGAAGAAGCTAAAAGAAATCCAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| 3UTR CCA 90 bp | CAAGTGAAGTTTCTCTGGCACAACAGTTTACTTGACAAACAGAACTaGATAGAGTCATTCCTGGTATTTTCTGAGACTCGGAAGCAATTT | + |
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Preference number: 1 (lower is better) Translates to: QVKFLWHNSLLDKQN*IESFLVFSETRKQF Trigger: AAATTGCTTCCGAGTCTCAGAAAATACCAGGAATGACTCTATCCAGTTCTGTTTGTCAAGTAAACTGTTGTGCCAGAGAAACTTCACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| 3UTR-3UTR CCA 90 bp | CTCATCAAAAATGGAGAAAGGTACACTGGGACCTTTAGAATGAGGTTGTTCCTGCTTGACAAACAGAACTaGATAGAGTCATTCCTGGTA | + |
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Preference number: 2 (lower is better) Translates to: LIKNGERYTGTFRMRLFLLDKQN*IESFLV Trigger: TACCAGGAATGACTCTATCCAGTTCTGTTTGTCAAG...CAGGAACAACCTCATTCTAAAGGTCCCAGTGTACCTTTCTCCATTTTTGATGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| 3UTR-3UTR CCA 90 bp | AAACTCATCAAAAATGGAGAAAGGTACACTGGGACCTTTAGAATGAGGTTGTTCCAAGTGAAGTTTCTCTaGCACAACAGTTTACTTGAC | + |
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Preference number: 2 (lower is better) Translates to: KLIKNGERYTGTFRMRLFQVKFL*HNSLLD Trigger: GTCAAGTAAACTGTTGTGCCAGAGAAACTTCACTTG...GAACAACCTCATTCTAAAGGTCCCAGTGTACCTTTCTCCATTTTTGATGAGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| 3UTR-3UTR CAA 90 bp | GCTCTTTTAATTTCTTCCGGAAAACTTCAGCCCGAATTTCTTCAAAGGAGAATTCTTCTCCTCAGACGCTaGCTGATGGCTCTGAACCCT | + |
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Preference number: 3 (lower is better) Translates to: ALLISSGKLQPEFLQRRILLLRR*LMALNP Trigger: AGGGTTCAGAGCCATCAGCAAGCGTCTGAGGAGAAG...AATTCTCCTTTGAAGAAATTCGGGCTGAAGTTTTCCGGAAGAAATTAAAAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| 3UTR TCA 72 bp | CAAACAGAACTGGATAGAGTCATTCCTGGTATTTTCTaGGACTCGGAAGCAATTTGCAGTTTAGTTGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: QTELDRVIPGIF*DSEAICSLVVS Trigger: GGAGACAACTAAACTGCAAATTGCTTCCGAGTCTCAGAAAATACCAGGAATGACTCTATCCAGTTCTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| 3UTR TCA 72 bp | TCCGCAAGTGAAGTTTCTCTGGCACAACAGTTTACTTaGCAAACAGAACTGGATAGAGTCATTCCTGGTATT | + |
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Preference number: 3 (lower is better) Translates to: SASEVSLAQQFT*QTELDRVIPGI Trigger: AATACCAGGAATGACTCTATCCAGTTCTGTTTGTCAAGTAAACTGTTGTGCCAGAGAAACTTCACTTGCGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| 3UTR CCA 72 bp | TTTCTCTGGCACAACAGTTTACTTGACAAACAGAACTaGATAGAGTCATTCCTGGTATTTTCTGAGACTCGG | + |
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Preference number: 3 (lower is better) Translates to: FLWHNSLLDKQN*IESFLVFSETR Trigger: CCGAGTCTCAGAAAATACCAGGAATGACTCTATCCAGTTCTGTTTGTCAAGTAAACTGTTGTGCCAGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| 3UTR-3UTR CAA 90 bp | GTGAAGTTTCTCTGGCACAACAGTTTACTTGACAAACAGAACTGGATAGAGTCAATCACCTGTTCTTTCTaGCTGAGTAGTTTGGATTTC | + |
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Preference number: 3 (lower is better) Translates to: VKFLWHNSLLDKQNWIESITCSF*LSSLDF Trigger: GAAATCCAAACTACTCAGCAAGAAAGAACAGGTGAT...TGACTCTATCCAGTTCTGTTTGTCAAGTAAACTGTTGTGCCAGAGAAACTTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR GCA 90 bp | TTGAGGATAGTTCTGCTCTGTCCAGCTGATATACCTATCCCAAACATCCAGAGGAGGTCCTCGTCCTGCTaGAGGCCTTTCCTCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LRIVLLCPADIPIPNIQRRSSSC*RPFLWA Trigger: GGCCCAGAGGAAAGGCCTGCAGCAGGACGAGGACCT...CCTCTGGATGTTTGGGATAGGTATATCAGCTGGACAGAGCAGAACTATCCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR TCA 90 bp | TGCTCTGTCCAGCTGATATACCTATCCCAAACATCCAGAGGGTCATTTCCAGTGAGGCAGAGCTTCCAGTaGGCCAAGATCGTGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: CSVQLIYLSQTSRGSFPVRQSFQ*AKIVPL Trigger: CAGTGGCACGATCTTGGCTCACTGGAAGCTCTGCCT...CACTGGAAATGACCCTCTGGATGTTTGGGATAGGTATATCAGCTGGACAGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR CCA 90 bp | CTCTGTCCAGCTGATATACCTATCCCAAACATCCAGAGGGTCATTTCCAGTGTACTCCCTCCAGGGACATaGCTTCACTCAGAGCACCCC | + |
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Preference number: 4 (lower is better) Translates to: LCPADIPIPNIQRVISSVLPPGT*LHSEHP Trigger: GGGGTGCTCTGAGTGAAGCCATGTCCCTGGAGGGAG...TACACTGGAAATGACCCTCTGGATGTTTGGGATAGGTATATCAGCTGGACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR TCA 90 bp | TGCATTTCTGCTCTCTTCTCTGCACTGGTCAATAGCTCGGCTTCCCTTTGCTCTCACCTCCTACACGGATaGTTGGAGCTCTTGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: CISALFSALVNSSASLCSHLLHG*LELLLS Trigger: AGACAGCAAGAGCTCCAATCATCCGTGTAGGAGGTG...AGAGCAAAGGGAAGCCGAGCTATTGACCAGTGCAGAGAAGAGAGCAGAAATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR TCA 90 bp | TGTCCAGCTGATATACCTATCCCAAACATCCAGAGGGTCATTTCCAGTGTAAAATGTGCCAGTGCTCCCTaGAGCGTGGACATGATCCGC | + |
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Preference number: 4 (lower is better) Translates to: CPADIPIPNIQRVISSVKCASAP*SVDMIR Trigger: GCGGATCATGTCCACGCTTCAGGGAGCACTGGCACA...TTTTACACTGGAAATGACCCTCTGGATGTTTGGGATAGGTATATCAGCTGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR CCA 90 bp | TATACCTATCCCAAACATCCAGAGGGTCATTTCCAGTGTAAAATCGAATTTCATTGCAGGCCTTTCCTCTaGGCCACAGACCGCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: YTYPKHPEGHFQCKIEFHCRPFL*ATDRLG Trigger: GCCCAGGCGGTCTGTGGCCCAGAGGAAAGGCCTGCA...ATGAAATTCGATTTTACACTGGAAATGACCCTCTGGATGTTTGGGATAGGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR GCA 90 bp | CTCTGTCCAGCTGATATACCTATCCCAAACATCCAGAGGGTCATTTCCAGTGTAAGATTCTTGTGCCAGTaGTCCCTGAAGCGTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: LCPADIPIPNIQRVISSVRFLCQ*SLKRGH Trigger: ATGTCCACGCTTCAGGGAGCACTGGCACAAGAATCT...TACACTGGAAATGACCCTCTGGATGTTTGGGATAGGTATATCAGCTGGACAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR GCA 90 bp | TGCATTTCTGCTCTCTTCTCTGCACTGGTCAATAGCTCGGCTTCCCTTTGCTCTAGCTCGGCTTCCCTTTaGTCTTTTAATTTCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: CISALFSALVNSSASLCSSSASL*SFNFFR Trigger: CCGGAAGAAATTAAAAGAGCAAAGGGAAGCCGAGCT...AGAGCAAAGGGAAGCCGAGCTATTGACCAGTGCAGAGAAGAGAGCAGAAATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR CCA 90 bp | TATACCTATCCCAAACATCCAGAGGGTCATTTCCAGTGTAAAATCGAATTTCATGGGCCACAGACCGCCTaGGCTTTCTTCCGCAACCTG | + |
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Preference number: 4 (lower is better) Translates to: YTYPKHPEGHFQCKIEFHGPQTA*AFFRNL Trigger: CAGGTTGCGGAAGAAAGCCCAGGCGGTCTGTGGCCC...ATGAAATTCGATTTTACACTGGAAATGACCCTCTGGATGTTTGGGATAGGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR TCA 90 bp | ACGTTGACATATTACTCTCCTTCCCACCTTGAGGATAGTTCTGCTCTGTCCAGCTCTCGTTTCTGCTGCTaGAGAGTATTGTTACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: TLTYYSPSHLEDSSALSSSRFCC*RVLLQA Trigger: TGCCTGTAACAATACTCTTCAGCAGCAGAAACGAGA...GCTGGACAGAGCAGAACTATCCTCAAGGTGGGAAGGAGAGTAATATGTCAACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR GCA 90 bp | TGCATTTCTGCTCTCTTCTCTGCACTGGTCAATAGCTCGGCTTCCCTTTGCTCTTTCTTCTTTCTCAAGTaGCAACAGAGTTTGCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: CISALFSALVNSSASLCSFFFLK*QQSLPR Trigger: TCTCGGCAAACTCTGTTGGCACTTGAGAAAGAAGAA...AGAGCAAAGGGAAGCCGAGCTATTGACCAGTGCAGAGAAGAGAGCAGAAATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR GCA 90 bp | CAGACGCTTGCTGATGGCTCTGAACCCTTTGTAGAGGATCTCCTTCTTCCTTTCTTCCAGGCTTTCTGGTaGTTAGGATGTGGTTTATAC | + |
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Preference number: 4 (lower is better) Translates to: QTLADGSEPFVEDLLLPFFQAFW*LGCGLY Trigger: GTATAAACCACATCCTAAGCACCAGAAAGCCTGGAA...GAAAGGAAGAAGGAGATCCTCTACAAAGGGTTCAGAGCCATCAGCAAGCGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR CCA 90 bp | TATACCTATCCCAAACATCCAGAGGGTCATTTCCAGTGTAAAATCGAATTTCATGCCATCCTGCATTCCTaGCTCAGGTCCTCGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: YTYPKHPEGHFQCKIEFHAILHS*LRSSSC Trigger: GCAGGACGAGGACCTGAGCCAGGAATGCAGGATGGC...ATGAAATTCGATTTTACACTGGAAATGACCCTCTGGATGTTTGGGATAGGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR CCA 90 bp | CTCATCAAAAATGGAGAAAGGTACACTGGGACCTTTAGAATGAGGTTGTTCCTGCTCTCTTCTCTGCACTaGTCAATAGCTCGGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LIKNGERYTGTFRMRLFLLSSLH*SIARLP Trigger: GGGAAGCCGAGCTATTGACCAGTGCAGAGAAGAGAG...CAGGAACAACCTCATTCTAAAGGTCCCAGTGTACCTTTCTCCATTTTTGATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR CCA 90 bp | TCTGCATTTCTGCTCTCTTCTCTGCACTGGTCAATAGCTCGGCTTCCCTTTGCTAGGTTCAATTTTACATaGTGTCCCTTGAGAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: SAFLLSSLHWSIARLPFARFNFT*CPLRAP Trigger: AGGTGCTCTCAAGGGACACCATGTAAAATTGAACCT...AGCAAAGGGAAGCCGAGCTATTGACCAGTGCAGAGAAGAGAGCAGAAATGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR TCA 90 bp | TTGAGGATAGTTCTGCTCTGTCCAGCTGATATACCTATCCCAAACATCCAGAGGTCTGCTCTGTCCAGCTaGTATACCTATCCCAAACAT | + |
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Preference number: 4 (lower is better) Translates to: LRIVLLCPADIPIPNIQRSALSS*YTYPKH Trigger: ATGTTTGGGATAGGTATATCAGCTGGACAGAGCAGA...CCTCTGGATGTTTGGGATAGGTATATCAGCTGGACAGAGCAGAACTATCCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR GCA 90 bp | TATCCCAAACATCCAGAGGGTCATTTCCAGTGTAAAATCGAATTTCATATTCAATCACCGCCGCCATCCTaGATTCCTGGCTCAGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: YPKHPEGHFQCKIEFHIQSPPPS*IPGSGP Trigger: AGGACCTGAGCCAGGAATGCAGGATGGCGGCGGTGA...TTGAATATGAAATTCGATTTTACACTGGAAATGACCCTCTGGATGTTTGGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR GCA 90 bp | ACGTTGACATATTACTCTCCTTCCCACCTTGAGGATAGTTCTGCTCTGTCCAGCGACATGATCCGCCCTTaGCTTAAAGGTTGTACATTT | + |
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Preference number: 4 (lower is better) Translates to: TLTYYSPSHLEDSSALSSDMIRP*LKGCTF Trigger: AAATGTACAACCTTTAAGGCAAGGGCGGATCATGTC...GCTGGACAGAGCAGAACTATCCTCAAGGTGGGAAGGAGAGTAATATGTCAACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR GCA 90 bp | TATACCTATCCCAAACATCCAGAGGGTCATTTCCAGTGTAAAATCGAATTTCATCCAAGATCGTGCCACTaGACTCCAGCCTGGCCGAAA | + |
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Preference number: 4 (lower is better) Translates to: YTYPKHPEGHFQCKIEFHPRSCH*TPAWPK Trigger: TTTCGGCCAGGCTGGAGTGCAGTGGCACGATCTTGG...ATGAAATTCGATTTTACACTGGAAATGACCCTCTGGATGTTTGGGATAGGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR CCA 90 bp | CAGACGCTTGCTGATGGCTCTGAACCCTTTGTAGAGGATCTCCTTCTTCCTTTCCAAGTGAAGTTTCTCTaGCACAACAGTTTACTTGAC | + |
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Preference number: 4 (lower is better) Translates to: QTLADGSEPFVEDLLLPFQVKFL*HNSLLD Trigger: GTCAAGTAAACTGTTGTGCCAGAGAAACTTCACTTG...GAAAGGAAGAAGGAGATCCTCTACAAAGGGTTCAGAGCCATCAGCAAGCGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR TCA 90 bp | TATACCTATCCCAAACATCCAGAGGGTCATTTCCAGTGTAAAATCGAATTTCATCCTGAAGCGTGGACATaGTCCGCCCTTGCCTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: YTYPKHPEGHFQCKIEFHPEAWT*SALALK Trigger: CTTTAAGGCAAGGGCGGATCATGTCCACGCTTCAGG...ATGAAATTCGATTTTACACTGGAAATGACCCTCTGGATGTTTGGGATAGGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR GCA 90 bp | TATACCTATCCCAAACATCCAGAGGGTCATTTCCAGTGTAAAATCGAATTTCATCTTTCTTCCGCAACCTaGCCTCGGAGCTACAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: YTYPKHPEGHFQCKIEFHLSSAT*PRSYRS Trigger: GCTTCTGTAGCTCCGAGGGCAGGTTGCGGAAGAAAG...ATGAAATTCGATTTTACACTGGAAATGACCCTCTGGATGTTTGGGATAGGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR TCA 90 bp | CTCTGGCACAACAGTTTACTTGACAAACAGAACTGGATAGAGTCATTCCTGGTAAATGTTCTCCGCAAGTaGAGTTTCTCTGGCACAACA | + |
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Preference number: 4 (lower is better) Translates to: LWHNSLLDKQNWIESFLVNVLRK*SFSGTT Trigger: TGTTGTGCCAGAGAAACTTCACTTGCGGAGAACATT...TACCAGGAATGACTCTATCCAGTTCTGTTTGTCAAGTAAACTGTTGTGCCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR TCA 90 bp | AGTTTACTTGACAAACAGAACTGGATAGAGTCATTCCTGGTATTTTCTGAGACTTTACATGGTGTCCCTTaGGAGCACCTCCTACACGGA | + |
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Preference number: 4 (lower is better) Translates to: SLLDKQNWIESFLVFSETLHGVP*EHLLHG Trigger: TCCGTGTAGGAGGTGCTCTCAAGGGACACCATGTAA...AGTCTCAGAAAATACCAGGAATGACTCTATCCAGTTCTGTTTGTCAAGTAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR GCA 90 bp | CACAACAGTTTACTTGACAAACAGAACTGGATAGAGTCATTCCTGGTATTTTCTAGTGCCAACAGAGTTTaGCGAGACACTCGAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: HNSLLDKQNWIESFLVFSSANRV*RDTRAW Trigger: CCAAGCTCGAGTGTCTCGGCAAACTCTGTTGGCACT...AGAAAATACCAGGAATGACTCTATCCAGTTCTGTTTGTCAAGTAAACTGTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR GCA 90 bp | TATCCCAAACATCCAGAGGGTCATTTCCAGTGTAAAATCGAATTTCATATTCAAACAGGCAGATTCTTGTaGCAGTGCTCCCTGAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: YPKHPEGHFQCKIEFHIQTGRFL*QCSLKR Trigger: ACGCTTCAGGGAGCACTGGCACAAGAATCTGCCTGT...TTGAATATGAAATTCGATTTTACACTGGAAATGACCCTCTGGATGTTTGGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR TCA 90 bp | CACAACAGTTTACTTGACAAACAGAACTGGATAGAGTCATTCCTGGTATTTTCTCTGGGACCTTTAGAATaGGGTTGTTCCTGCCAAATG | + |
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Preference number: 4 (lower is better) Translates to: HNSLLDKQNWIESFLVFSLGPLE*GCSCQM Trigger: CATTTGGCAGGAACAACCTCATTCTAAAGGTCCCAG...AGAAAATACCAGGAATGACTCTATCCAGTTCTGTTTGTCAAGTAAACTGTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR GCA 90 bp | CTCATCAAAAATGGAGAAAGGTACACTGGGACCTTTAGAATGAGGTTGTTCCTGGAATTCCCCTACTCCTaGATAAATCTTCTCCTTACA | + |
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Preference number: 4 (lower is better) Translates to: LIKNGERYTGTFRMRLFLEFPYS*INLLLT Trigger: TGTAAGGAGAAGATTTATGCAGGAGTAGGGGAATTC...CAGGAACAACCTCATTCTAAAGGTCCCAGTGTACCTTTCTCCATTTTTGATGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR TCA 90 bp | GCTCTTTTAATTTCTTCCGGAAAACTTCAGCCCGAATTTCTTCAAAGGAGAATTATCGTCTCTTCTTGCTaGTCACCTGTTCTTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: ALLISSGKLQPEFLQRRIIVSSC*SPVLSC Trigger: GCAAGAAAGAACAGGTGATCAGCAAGAAGAGACGAT...AATTCTCCTTTGAAGAAATTCGGGCTGAAGTTTTCCGGAAGAAATTAAAAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR TCA 90 bp | AAACTCATCAAAAATGGAGAAAGGTACACTGGGACCTTTAGAATGAGGTTGTTCATTCCTGGTATTTTCTaGGACTCGGAAGCAATTTGC | + |
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Preference number: 4 (lower is better) Translates to: KLIKNGERYTGTFRMRLFIPGIF*DSEAIC Trigger: GCAAATTGCTTCCGAGTCTCAGAAAATACCAGGAAT...GAACAACCTCATTCTAAAGGTCCCAGTGTACCTTTCTCCATTTTTGATGAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR GCA 90 bp | GTGAAGTTTCTCTGGCACAACAGTTTACTTGACAAACAGAACTGGATAGAGTCAGACTCGGAAGCAATTTaGAGTTTAGTTGTCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: VKFLWHNSLLDKQNWIESDSEAI*SLVVSF Trigger: AAAGGAGACAACTAAACTGCAAATTGCTTCCGAGTC...TGACTCTATCCAGTTCTGTTTGTCAAGTAAACTGTTGTGCCAGAGAAACTTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR CCA 90 bp | GCTCTTTTAATTTCTTCCGGAAAACTTCAGCCCGAATTTCTTCAAAGGAGAATTCCTTTCCAGGCTTTCTaGTGCTTAGGATGTGGTTTA | + |
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Preference number: 4 (lower is better) Translates to: ALLISSGKLQPEFLQRRIPFQAF*CLGCGL Trigger: TAAACCACATCCTAAGCACCAGAAAGCCTGGAAAGG...AATTCTCCTTTGAAGAAATTCGGGCTGAAGTTTTCCGGAAGAAATTAAAAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR CCA 90 bp | AATTTCTTCCGGAAAACTTCAGCCCGAATTTCTTCAAAGGAGAATTCCCCTACTCTTGACAAACAGAACTaGATAGAGTCATTCCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: NFFRKTSARISSKENSPTLDKQN*IESFLV Trigger: TACCAGGAATGACTCTATCCAGTTCTGTTTGTCAAG...AGTAGGGGAATTCTCCTTTGAAGAAATTCGGGCTGAAGTTTTCCGGAAGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR GCA 90 bp | GAATTTCTTCAAAGGAGAATTCCCCTACTCCTGCATAAATCTTCTCCTTACAATTTAGTTCAGCTAGTGTaGTTCGTTGTGGTACAGAAG | + |
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Preference number: 4 (lower is better) Translates to: EFLQRRIPLLLHKSSPYNLVQLV*FVVVQK Trigger: CTTCTGTACCACAACGAAGCACACTAGCTGAACTAA...ATTGTAAGGAGAAGATTTATGCAGGAGTAGGGGAATTCTCCTTTGAAGAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR TCA 90 bp | AGTTTACTTGACAAACAGAACTGGATAGAGTCATTCCTGGTATTTTCTGAGACTGCACAACAGTTTACTTaGCAAACAGAACTGGATAGA | + |
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Preference number: 4 (lower is better) Translates to: SLLDKQNWIESFLVFSETAQQFT*QTELDR Trigger: TCTATCCAGTTCTGTTTGTCAAGTAAACTGTTGTGC...AGTCTCAGAAAATACCAGGAATGACTCTATCCAGTTCTGTTTGTCAAGTAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR CCA 90 bp | AAACTCATCAAAAATGGAGAAAGGTACACTGGGACCTTTAGAATGAGGTTGTTCCTGGTGCTTAGGATGTaGTTTATACTAGGTTCAATT | + |
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Preference number: 4 (lower is better) Translates to: KLIKNGERYTGTFRMRLFLVLRM*FILGSI Trigger: AATTGAACCTAGTATAAACCACATCCTAAGCACCAG...GAACAACCTCATTCTAAAGGTCCCAGTGTACCTTTCTCCATTTTTGATGAGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR GCA 90 bp | TATACCTATCCCAAACATCCAGAGGGTCATTTCCAGTGTAAAATCGAATTTCATAATTTCATATTCAAATaGCCTGTAGTCCCAGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: YTYPKHPEGHFQCKIEFHNFIFK*PVVPAT Trigger: AGTAGCTGGGACTACAGGGCATTTGAATATGAAATT...ATGAAATTCGATTTTACACTGGAAATGACCCTCTGGATGTTTGGGATAGGTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS GCA 90 bp | TTTATACTAGGTTCAATTTTACATGGTGTCCTTGGCCTCCCAAAGTaGTGGGATGGCAAACGTGGGCTGCCATGCCCGTTGAACCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FILGSILHGVLGLPK*WDGKRGLPCPLNQE Trigger: CTCCTGGTTCAACGGGCATGGCAGCCCACGTTTGCCATCCCAGCACTTTGGGAGGCCAAGGACACCATGTAAAATTGAACCTAGTATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557848.1 |
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| CDS-3UTR CAA 90 bp | TTGAGGATAGTTCTGCTCTGTCCAGCTGATATACCTATCCCAAACATCCAGAGGGTTACAGGCAGATTCTaGTGCCAGTGCTCCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRIVLLCPADIPIPNIQRVTGRF*CQCSLK Trigger: CTTCAGGGAGCACTGGCACAAGAATCTGCCTGTAAC...CCTCTGGATGTTTGGGATAGGTATATCAGCTGGACAGAGCAGAACTATCCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS-3UTR CAA 90 bp | CAGACGCTTGCTGATGGCTCTGAACCCTTTGTAGAGGATCTCCTTCTTCCTTTCAGGCATCGTCTCTTCTaGCTGATCACCTGTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QTLADGSEPFVEDLLLPFRHRLF*LITCSF Trigger: GAAAGAACAGGTGATCAGCAAGAAGAGACGATGCCT...GAAAGGAAGAAGGAGATCCTCTACAAAGGGTTCAGAGCCATCAGCAAGCGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS GCA 90 bp | TCAAAAACTTCCTCCTCTTCTTCTTTCTCAAGTGCCAACAGAGTTTaGCGAGACACTCGAGCTTGGAATTGTCGGTGCTGGGACTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SKTSSSSSFSSANRV*RDTRAWNCRCWDCS Trigger: ACTACAGTCCCAGCACCGACAATTCCAAGCTCGAGTGTCTCGGCAAACTCTGTTGGCACTTGAGAAAGAAGAAGAGGAGGAAGTTTTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
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| CDS-3UTR CAA 90 bp | CTCTGTCCAGCTGATATACCTATCCCAAACATCCAGAGGGTCATTTCCAGTGTAACTCTCCTTCCCACCTaGAGGATAGTTCTGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LCPADIPIPNIQRVISSVTLLPT*RIVLLC Trigger: ACAGAGCAGAACTATCCTCAAGGTGGGAAGGAGAGT...TACACTGGAAATGACCCTCTGGATGTTTGGGATAGGTATATCAGCTGGACAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS TCA 90 bp | TGTTACAGGCAGATTCTTGTGCCAGTGCTCCCTGAAGCGTGGACATaGTCCGCCCTTGCCTTAAAGGTTGTACATTTTCTTTACTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CYRQILVPVLPEAWT*SALALKVVHFLYSV Trigger: AACTGAGTAAAGAAAATGTACAACCTTTAAGGCAAGGGCGGATCATGTCCACGCTTCAGGGAGCACTGGCACAAGAATCTGCCTGTAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000558715.5 ENST00000559414.5 |
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| CDS TCA 90 bp | CACATATGGAGTGAAACTGGGAAGCACAGCGGGTACAGCTATCAGTaGAGCTGTATTGCCACGAGGCTGGAGATGAAGAAGAAAACTAAA | + |
|
Preference number: 5 (lower is better) Translates to: HIWSETGKHSGYSYQ*SCIATRLEMKKKTK Trigger: TTTAGTTTTCTTCTTCATCTCCAGCCTCGTGGCAATACAGCTTCACTGATAGCTGTACCCGCTGTGCTTCCCAGTTTCACTCCATATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557848.1 ENST00000559772.1 |
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| CDS GCA 90 bp | TGGTACAGAAGACTCAAAAACTTCCTCCTCTTCTTCTTTCTCAAGTaGCAACAGAGTTTGCCGAGACACTCGAGCTTGGAATTGTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WYRRLKNFLLFFFLK*QQSLPRHSSLELSV Trigger: CACCGACAATTCCAAGCTCGAGTGTCTCGGCAAACTCTGTTGGCACTTGAGAAAGAAGAAGAGGAGGAAGTTTTTGAGTCTTCTGTACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
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| CDS-3UTR CAA 90 bp | CAGACGCTTGCTGATGGCTCTGAACCCTTTGTAGAGGATCTCCTTCTTCCTTTCGCTGTCTTTTTCCCTTaGCTCTTTAGTTCAGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: QTLADGSEPFVEDLLLPFAVFFP*LFSSAS Trigger: ACTAGCTGAACTAAAGAGCAAAGGGAAAAAGACAGC...GAAAGGAAGAAGGAGATCCTCTACAAAGGGTTCAGAGCCATCAGCAAGCGTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559733.5 |
||
| CDS CCA 90 bp | AAACCCCATTCATTTCTGCTGCAAGCTCCCCAAGAACAGACACTGTaGCCTCATCATTGGCATTCAGAATCCGCACAAAGAATTTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: KPHSFLLQAPQEQTL*PHHWHSESAQRIYS Trigger: GGAATAAATTCTTTGTGCGGATTCTGAATGCCAATGATGAGGCCACAGTGTCTGTTCTTGGGGAGCTTGCAGCAGAAATGAATGGGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
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| CDS TCA 90 bp | AGTCTCTCAGGATCAGAAGGGAGATCCTTCAAGGACATTATCTCATaGAAAGGAGTGGATACAAAACGAGCTGCTCTGGCAAAGTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: SLSGSEGRSFKDIIS*KGVDTKRAALAKSQ Trigger: TTGTGACTTTGCCAGAGCAGCTCGTTTTGTATCCACTCCTTTTCATGAGATAATGTCCTTGAAGGATCTCCCTTCTGATCCTGAGAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
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| CDS-3UTR CAA 90 bp | GAATTTCTTCAAAGGAGAATTCCCCTACTCCTGCATAAATCTTCTCCTTACAATCTTCTCCTCAGACGCTaGCTGATGGCTCTGAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: EFLQRRIPLLLHKSSPYNLLLRR*LMALNP Trigger: AGGGTTCAGAGCCATCAGCAAGCGTCTGAGGAGAAG...ATTGTAAGGAGAAGATTTATGCAGGAGTAGGGGAATTCTCCTTTGAAGAAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559733.5 |
||
| CDS GCA 90 bp | GAGCTCTTGCTGTCTTTTTCCCTTTGCTCTTTAGTTCAGCTAGTGTaGTTCGTTGTGGTACAGAAGACTCAAAAACTTCCTCCTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ELLLSFSLCSLVQLV*FVVVQKTQKLPPLL Trigger: AAGAAGAGGAGGAAGTTTTTGAGTCTTCTGTACCACAACGAAGCACACTAGCTGAACTAAAGAGCAAAGGGAAAAAGACAGCAAGAGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000559461.1 ENST00000559733.5 |
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| CDS CCA 90 bp | AGTGGATACAAAACGAGCTGCTCTGGCAAAGTCACAAGTGTCTTCTaGGTTAGGACAAATTGTTACATTTCTGAAGCCTGTGATAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SGYKTSCSGKVTSVF*VRTNCYISEACDNG Trigger: GCCATTATCACAGGCTTCAGAAATGTAACAATTTGTCCTAACCCAGAAGACACTTGTGACTTTGCCAGAGCAGCTCGTTTTGTATCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
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| CDS-3UTR CAA 90 bp | GCTCTTTTAATTTCTTCCGGAAAACTTCAGCCCGAATTTCTTCAAAGGAGAATTAAGTGCCAACAGAGTTaGCCGAGACACTCGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALLISSGKLQPEFLQRRIKCQQS*PRHSSL Trigger: CAAGCTCGAGTGTCTCGGCAAACTCTGTTGGCACTT...AATTCTCCTTTGAAGAAATTCGGGCTGAAGTTTTCCGGAAGAAATTAAAAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR CAA 90 bp | TTTCTTCCGGAAAACTTCAGCCCGAATTTCTTCAAAGGAGAATTCCCCTACTCCACCTTTAGAATGAGGTaGTTCCTGCCAAATGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLPENFSPNFFKGEFPYSTFRMR*FLPNVL Trigger: GAGAACATTTGGCAGGAACAACCTCATTCTAAAGGT...GGAGTAGGGGAATTCTCCTTTGAAGAAATTCGGGCTGAAGTTTTCCGGAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS-3UTR CAA 90 bp | GAATTTCTTCAAAGGAGAATTCCCCTACTCCTGCATAAATCTTCTCCTTACAATTTTACATGGTGTCCCTaGAGAGCACCTCCTACACGG | + |
|
Preference number: 5 (lower is better) Translates to: EFLQRRIPLLLHKSSPYNFTWCP*RAPPTR Trigger: CCGTGTAGGAGGTGCTCTCAAGGGACACCATGTAAA...ATTGTAAGGAGAAGATTTATGCAGGAGTAGGGGAATTCTCCTTTGAAGAAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS TCA 90 bp | GGGTTTTCTGAAGTCTCATTAGTAAGTTCTAGTTTCTCAGGAATTTaGAGACATTTGATGGAGGAGGTGCTTGCAACCGAGGCAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GFSEVSLVSSSFSGI*RHLMEEVLATEAEE Trigger: TTCTTCTGCCTCGGTTGCAAGCACCTCCTCCATCAAATGTCTTCAAATTCCTGAGAAACTAGAACTTACTAATGAGACTTCAGAAAACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
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| CDS CCA 90 bp | TGGATTCTGTTTCTGAGAATCAGACACCTTGGACTCAAGTCACCATaGACTATTTCTGCTTTGTGTAGCATCTCCACTATTGTCAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WILFLRIRHLGLKSP*TISALCSISTIVKR Trigger: CCTTTTGACAATAGTGGAGATGCTACACAAAGCAGAAATAGTCCATGGTGACTTGAGTCCAAGGTGTCTGATTCTCAGAAACAGAATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
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| CDS-3UTR CAA 90 bp | CTCTGGCACAACAGTTTACTTGACAAACAGAACTGGATAGAGTCATTCCTGGTAAGACTCGGAAGCAATTaGCAGTTTAGTTGTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LWHNSLLDKQNWIESFLVRLGSN*QFSCLL Trigger: AAGGAGACAACTAAACTGCAAATTGCTTCCGAGTCT...TACCAGGAATGACTCTATCCAGTTCTGTTTGTCAAGTAAACTGTTGTGCCAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS TCA 90 bp | TGCTCTGTCCAGCTGATATACCTGTTAATGTTTCTATTGTCCTTGTaGAATAAAAAGACCCACCTATCCCAAACATCCAGAGGGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: CSVQLIYLLMFLLSL*NKKTHLSQTSRGSF Trigger: AAATGACCCTCTGGATGTTTGGGATAGGTGGGTCTTTTTATTTCACAAGGACAATAGAAACATTAACAGGTATATCAGCTGGACAGAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412359.7 |
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| CDS-3UTR CAA 90 bp | AAACTCATCAAAAATGGAGAAAGGTACACTGGGACCTTTAGAATGAGGTTGTTCATCACCTGTTCTTTCTaGCTGAGTAGTTTGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLIKNGERYTGTFRMRLFITCSF*LSSLDF Trigger: GAAATCCAAACTACTCAGCAAGAAAGAACAGGTGAT...GAACAACCTCATTCTAAAGGTCCCAGTGTACCTTTCTCCATTTTTGATGAGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559733.5 |
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| CDS GCA 72 bp | CTGGGCCACAGACCGCCTGGGCTTTCTTCCGCAACCTaGCCTCGGAGCTACAGAAGCGACCAAGGCACGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LGHRPPGLSSAT*PRSYRSDQGTY Trigger: GTACGTGCCTTGGTCGCTTCTGTAGCTCCGAGGGCAGGTTGCGGAAGAAAGCCCAGGCGGTCTGTGGCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000558715.5 ENST00000559414.5 ENST00000560120.5 |
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| CDS GCA 72 bp | CTCCCAAAGTGCTGGGATGGCAAACGTGGGCTGCCATaGCCGTTGAACCAGGAGGTCGAGGTTGCGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LPKCWDGKRGLP*PLNQEVEVAVS Trigger: GCTCACCGCAACCTCGACCTCCTGGTTCAACGGGCATGGCAGCCCACGTTTGCCATCCCAGCACTTTGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557848.1 |
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| CDS GCA 72 bp | CCTGTGTTCCAAGGACCTGCCTGTGTTCCAAGGGCCTaGTTGCAGCTCATTCTCTTTGGCCCTGGGCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: PVFQGPACVPRA*LQLILFGPGHG Trigger: CCCATGCCCAGGGCCAAAGAGAATGAGCTGCAAGCAGGCCCTTGGAACACAGGCAGGTCCTTGGAACACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000559461.1 |
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| CDS GCA 72 bp | CTGCTGCTGAAGAGTATTGTTACAGGCAGATTCTTGTaGCAGTGCTCCCTGAAGCGTGGACATGATCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LLLKSIVTGRFL*QCSLKRGHDPP Trigger: GGGCGGATCATGTCCACGCTTCAGGGAGCACTGGCACAAGAATCTGCCTGTAACAATACTCTTCAGCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000558715.5 ENST00000559414.5 |
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| CDS GCA 72 bp | CTGAAGAGTATTGTTACAGGCAGATTCTTGTGCCAGTaGTCCCTGAAGCGTGGACATGATCCGCCCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LKSIVTGRFLCQ*SLKRGHDPPLP Trigger: AGGCAAGGGCGGATCATGTCCACGCTTCAGGGAGCACTGGCACAAGAATCTGCCTGTAACAATACTCTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000558715.5 ENST00000559414.5 |
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| CDS TCA 72 bp | GTATTGTTACAGGCAGATTCTTGTGCCAGTGCTCCCTaGAGCGTGGACATGATCCGCCCTTGCCTTAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VLLQADSCASAP*SVDMIRPCLKG Trigger: ACCTTTAAGGCAAGGGCGGATCATGTCCACGCTTCAGGGAGCACTGGCACAAGAATCTGCCTGTAACAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000558715.5 ENST00000559414.5 |
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| CDS TCA 72 bp | AGTGAAACTGGGAAGCACAGCGGGTACAGCTATCAGTaGAGCTGTATTGCCACGAGGCTGGAGATGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SETGKHSGYSYQ*SCIATRLEMKK Trigger: CTTCTTCATCTCCAGCCTCGTGGCAATACAGCTTCACTGATAGCTGTACCCGCTGTGCTTCCCAGTTTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557848.1 ENST00000559772.1 |
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| CDS TCA 72 bp | GGCCGAAAGAGCGAGACTCCGTCTCGTTTCTGCTGCTaGAGAGTATTGTTACAGGCAGATTCTTGTGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GRKSETPSRFCC*RVLLQADSCAS Trigger: ACTGGCACAAGAATCTGCCTGTAACAATACTCTTCAGCAGCAGAAACGAGACGGAGTCTCGCTCTTTCGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558715.5 |
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| CDS GCA 72 bp | TCCTCCTCTTCTTCTTTCTCAAGTGCCAACAGAGTTTaGCGAGACACTCGAGCTTGGAATTGTCGGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSFSSANRV*RDTRAWNCRCW Trigger: CCAGCACCGACAATTCCAAGCTCGAGTGTCTCGGCAAACTCTGTTGGCACTTGAGAAAGAAGAAGAGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
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| CDS GCA 72 bp | TGCTGGGCAACAGAGCAAGACTATAACTGGCTGTCGTaGAGTCTCTTCCACATATGGAGTGAAACTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CWATEQDYNWLS*SLFHIWSETGK Trigger: CTTCCCAGTTTCACTCCATATGTGGAAGAGACTGCACGACAGCCAGTTATAGTCTTGCTCTGTTGCCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557848.1 |
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| CDS CAA 72 bp | TTCCTCCTCTTCTTCTTTCTCAAGTGCCAACAGAGTTaGCCGAGACACTCGAGCTTGGAATTGTCGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FLLFFFLKCQQS*PRHSSLELSVL Trigger: CAGCACCGACAATTCCAAGCTCGAGTGTCTCGGCAAACTCTGTTGGCACTTGAGAAAGAAGAAGAGGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
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| CDS CAA 72 bp | TACCTGGTAGGGAGAAGAACAGTTAGCCAGGATCTTTaGTCCTTCCAGGATCTGTACAGTCCGAAAGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: YLVGRRTVSQDL*SFQDLYSPKAA Trigger: AGCGGCTTTCGGACTGTACAGATCCTGGAAGGACAAAAGATCCTGGCTAACTGTTCTTCTCCCTACCAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000558151.1 |
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| CDS TCA 72 bp | CAGATTCTTGTGCCAGTGCTCCCTGAAGCGTGGACATaGTCCGCCCTTGCCTTAAAGGTTGTACATTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QILVPVLPEAWT*SALALKVVHFL Trigger: AAGAAAATGTACAACCTTTAAGGCAAGGGCGGATCATGTCCACGCTTCAGGGAGCACTGGCACAAGAATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000558715.5 ENST00000559414.5 |
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| CDS CAA 90 bp | GCACCTCCTACACGGATGATTGGAGCTCTTGCTGTCTTTTTCCCTTaGCTCTTTAGTTCAGCTAGTGTGCTTCGTTGTGGTACAGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: APPTRMIGALAVFFP*LFSSASVLRCGTED Trigger: GTCTTCTGTACCACAACGAAGCACACTAGCTGAACTAAAGAGCAAAGGGAAAAAGACAGCAAGAGCTCCAATCATCCGTGTAGGAGGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000559461.1 ENST00000559733.5 |
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| CDS TCA 72 bp | GGATCAGAAGGGAGATCCTTCAAGGACATTATCTCATaGAAAGGAGTGGATACAAAACGAGCTGCTCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSEGRSFKDIIS*KGVDTKRAALA Trigger: TGCCAGAGCAGCTCGTTTTGTATCCACTCCTTTTCATGAGATAATGTCCTTGAAGGATCTCCCTTCTGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
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| CDS GCA 72 bp | AGACTCAAAAACTTCCTCCTCTTCTTCTTTCTCAAGTaGCAACAGAGTTTGCCGAGACACTCGAGCTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RLKNFLLFFFLK*QQSLPRHSSLE Trigger: TTCCAAGCTCGAGTGTCTCGGCAAACTCTGTTGGCACTTGAGAAAGAAGAAGAGGAGGAAGTTTTTGAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000559733.5 |
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| CDS CCA 72 bp | GGGATCGTGGATTCTGTTTCTGAGAATCAGACACCTTaGACTCAAGTCACCATGGACTATTTCTGCTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GIVDSVSENQTP*TQVTMDYFCFV Trigger: CACAAAGCAGAAATAGTCCATGGTGACTTGAGTCCAAGGTGTCTGATTCTCAGAAACAGAATCCACGATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
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| CDS CCA 72 bp | CAAGCTCCCCAAGAACAGACACTGTGGCCTCATCATTaGCATTCAGAATCCGCACAAAGAATTTATTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: QAPQEQTLWPHH*HSESAQRIYST Trigger: TGTGGAATAAATTCTTTGTGCGGATTCTGAATGCCAATGATGAGGCCACAGTGTCTGTTCTTGGGGAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
||
| CDS CAA 72 bp | ACACGGATGATTGGAGCTCTTGCTGTCTTTTTCCCTTaGCTCTTTAGTTCAGCTAGTGTGCTTCGTTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TRMIGALAVFFP*LFSSASVLRCG Trigger: ACCACAACGAAGCACACTAGCTGAACTAAAGAGCAAAGGGAAAAAGACAGCAAGAGCTCCAATCATCCGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000559461.1 ENST00000559733.5 |
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| CDS CCA 72 bp | AAAACGAGCTGCTCTGGCAAAGTCACAAGTGTCTTCTaGGTTAGGACAAATTGTTACATTTCTGAAGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: KTSCSGKVTSVF*VRTNCYISEAC Trigger: ACAGGCTTCAGAAATGTAACAATTTGTCCTAACCCAGAAGACACTTGTGACTTTGCCAGAGCAGCTCGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
||
| CDS CAA 72 bp | TCTACTATTATTTTGCATCTGTTGAGGAAATGGATTTaGGAGTCCTCTGTTCTGGCTTGGAGCCTTGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: STIILHLLRKWI*ESSVLAWSLES Trigger: GCTCTCAAGGCTCCAAGCCAGAACAGAGGACTCCAAAATCCATTTCCTCAACAGATGCAAAATAATAGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000559461.1 |
||
| CDS CAA 72 bp | CAGAAGGACCCATCCCAGAAGACCTGTAGGTGTTCCTaGAACAATAGTAAATGTGCTAAATCTGCTATACCA | + |
|
Preference number: 6 (lower is better) Translates to: QKDPSQKTCRCS*NNSKCAKSAIP Trigger: TGGTATAGCAGATTTAGCACATTTACTATTGTTCAAGGAACACCTACAGGTCTTCTGGGATGGGTCCTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000558151.1 |
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| CDS CAA 90 bp | AACAGTAATTCTACTATTATTTTGCATCTGTTGAGGAAATGGATTTaGGAGTCCTCTGTTCTGGCTTGGAGCCTTGAGAGCACCTCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: NSNSTIILHLLRKWI*ESSVLAWSLESTSY Trigger: GTAGGAGGTGCTCTCAAGGCTCCAAGCCAGAACAGAGGACTCCAAAATCCATTTCCTCAACAGATGCAAAATAATAGTAGAATTACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000559461.1 |
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| CDS CAA 90 bp | CTAAGTTTCCAGAAGGACCCATCCCAGAAGACCTGTAGGTGTTCCTaGAACAATAGTAAATGTGCTAAATCTGCTATACCAAACAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSFQKDPSQKTCRCS*NNSKCAKSAIPNRS Trigger: AGACCTGTTTGGTATAGCAGATTTAGCACATTTACTATTGTTCAAGGAACACCTACAGGTCTTCTGGGATGGGTCCTTCTGGAAACTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000558151.1 |
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| CDS TCA 72 bp | AGAAGGACCCATCCCAGAAGACCTGTAGGTGTTCCTTaGACAATAGTAAATGTGCTAAATCTGCTATACCAA | + |
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Preference number: 6 (lower is better) Translates to: RRTHPRRPVGVP*TIVNVLNLLYQ Trigger: TTGGTATAGCAGATTTAGCACATTTACTATTGTTCAAGGAACACCTACAGGTCTTCTGGGATGGGTCCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000558151.1 |
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| CDS GCA 72 bp | CTGTCTTTTTCCCTTTGCTCTTTAGTTCAGCTAGTGTaGTTCGTTGTGGTACAGAAGACTCAAAAACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LSFSLCSLVQLV*FVVVQKTQKLP Trigger: AGGAAGTTTTTGAGTCTTCTGTACCACAACGAAGCACACTAGCTGAACTAAAGAGCAAAGGGAAAAAGACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000559461.1 ENST00000559733.5 |
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| CDS CCA 72 bp | TTTCTGAGAATCAGACACCTTGGACTCAAGTCACCATaGACTATTTCTGCTTTGTGTAGCATCTCCACTATT | + |
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Preference number: 6 (lower is better) Translates to: FLRIRHLGLKSP*TISALCSISTI Trigger: AATAGTGGAGATGCTACACAAAGCAGAAATAGTCCATGGTGACTTGAGTCCAAGGTGTCTGATTCTCAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
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| CDS CAA 72 bp | CTCCTTGTAGTGCTTCTACAGCTCTTTCTAATAACGTaGACATATTACTCTCCTTCCCACCTTGAGGATAGT | + |
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Preference number: 6 (lower is better) Translates to: LLVVLLQLFLIT*TYYSPSHLEDS Trigger: ACTATCCTCAAGGTGGGAAGGAGAGTAATATGTCAACGTTATTAGAAAGAGCTGTAGAAGCACTACAAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000560120.5 |
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| CDS CAA 90 bp | ATCGTTTTTCTCCTTGTAGTGCTTCTACAGCTCTTTCTAATAACGTaGACATATTACTCTCCTTCCCACCTTGAGGATAGTTCTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: IVFLLVVLLQLFLIT*TYYSPSHLEDSSAL Trigger: CAGAGCAGAACTATCCTCAAGGTGGGAAGGAGAGTAATATGTCAACGTTATTAGAAAGAGCTGTAGAAGCACTACAAGGAGAAAAACGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000560120.5 |
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| CDS CAA 90 bp | CACCCTAAGGTCAACACTGTAGGAAAAGTCCACTATCTTCAAAGCTaGATTGTTCTTGTTACAATCATAGGGATCGTGGATTCTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: HPKVNTVGKVHYLQS*IVLVTIIGIVDSVS Trigger: AGAAACAGAATCCACGATCCCTATGATTGTAACAAGAACAATCAAGCTTTGAAGATAGTGGACTTTTCCTACAGTGTTGACCTTAGGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
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| CDS CAA 72 bp | GTCAACACTGTAGGAAAAGTCCACTATCTTCAAAGCTaGATTGTTCTTGTTACAATCATAGGGATCGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: VNTVGKVHYLQS*IVLVTIIGIVD Trigger: ATCCACGATCCCTATGATTGTAACAAGAACAATCAAGCTTTGAAGATAGTGGACTTTTCCTACAGTGTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000287598.11 ENST00000412359.7 ENST00000558151.1 |
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| CDS CAA 72 bp | AAGATACCTTTATTACTGTTAATTCTGCAGAGTTTCTaGGCGCCACCCAGAATAACTTGTAATCTTCACATA | + |
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Preference number: 6 (lower is better) Translates to: KIPLLLLILQSF*APPRITCNLHI Trigger: TATGTGAAGATTACAAGTTATTCTGGGTGGCGCCAAGAAACTCTGCAGAATTAACAGTAATAAAGGTATCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287598.11 ENST00000412359.7 |
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