RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BTRC (Homo sapiens)

Ensembl gene IDs: ENSG00000166167

Ensembl transcript IDs: ENST00000370183.2, ENST00000370187.8, ENST00000393441.8, ENST00000408038.6, ENST00000465182.1, ENST00000475200.5, ENST00000493877.1

Found 787 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGTGTGGAGGAAGACCAGGGAGGCTGCACCCTAAGCCTCCGGGCTaGACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGT +
Preference number: 1 (lower is better)
Translates to: LCGGRPGRLHPKPPG*TNLGWTALLQTGGC
Trigger: ACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGGAGGCTTAGGGTGCAGCCTCCCTGGTCTTCCTCCACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 90 bp CCAGGGAGGCTGCACCCTAAGCCTCCGGGCTGCACTAATCTGGGTTaGACTGCTCTGCTACAGACTGGAGGGTGTTGCCATCTAAGGCAA +
Preference number: 1 (lower is better)
Translates to: PGRLHPKPPGCTNLG*TALLQTGGCCHLRQ
Trigger: TTGCCTTAGATGGCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGGAGGCTTAGGGTGCAGCCTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 90 bp GCACTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTaGAGACCAACTGTGTCCCAACAGGAGTCTCAAAGCCCTGCTCCT +
Preference number: 1 (lower is better)
Translates to: ALKQSVVLSRPSWAD*RPTVSQQESQSPAP
Trigger: AGGAGCAGGGCTTTGAGACTCCTGTTGGGACACAGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 90 bp TCTGGTCTGTTGGTGAACAACTGTGTGGAGGAAGACCAGGGAGGCTaGACCCTAAGCCTCCGGGCTGCACTAATCTGGGTTGGACTGCTC +
Preference number: 1 (lower is better)
Translates to: SGLLVNNCVEEDQGG*TLSLRAALIWVGLL
Trigger: GAGCAGTCCAACCCAGATTAGTGCAGCCCGGAGGCTTAGGGTGCAGCCTCCCTGGTCTTCCTCCACACAGTTGTTCACCAACAGACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 90 bp GGCCGACTGCAGACCAACTGTGTCCCAACAGGAGTCTCAAAGCCCTaGTCCTCGGCTAGTCCAGGGAAACTGGGCAGTAGTTTGATTGTT +
Preference number: 1 (lower is better)
Translates to: GRLQTNCVPTGVSKP*SSASPGKLGSSLIV
Trigger: AACAATCAAACTACTGCCCAGTTTCCCTGGACTAGCCGAGGAGCAGGGCTTTGAGACTCCTGTTGGGACACAGTTGGTCTGCAGTCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 90 bp CTGATAGCAGCACTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTaGGCCGACTGCAGACCAACTGTGTCCCAACAGGAGTCTCAAAGC +
Preference number: 1 (lower is better)
Translates to: LIAALKQSVVLSRPS*ADCRPTVSQQESQS
Trigger: GCTTTGAGACTCCTGTTGGGACACAGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAGTGCTGCTATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 90 bp AGCTCTCGGGGAAGCTTACATGTGTTGTTAGGCCTGTCCCATCATTaGAGTGCACTGGCCATCCCTCAGATTTGTCTGGGCTGGCCTGAG +
Preference number: 1 (lower is better)
Translates to: SSRGSLHVLLGLSHH*SALAIPQICLGWPE
Trigger: CTCAGGCCAGCCCAGACAAATCTGAGGGATGGCCAGTGCACTCCAATGATGGGACAGGCCTAACAACACATGTAAGCTTCCCCGAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 90 bp TCATTGGAGTGCACTGGCCATCCCTCAGATTTGTCTGGGCTGGCCTaGGTGGTCACCGCTTTGAGAAAGCTGTTAGTTTCCTTGGTGCCC +
Preference number: 1 (lower is better)
Translates to: SLECTGHPSDLSGLA*VVTALRKLLVSLVP
Trigger: GGGCACCAAGGAAACTAACAGCTTTCTCAAAGCGGTGACCACTCAGGCCAGCCCAGACAAATCTGAGGGATGGCCAGTGCACTCCAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 90 bp GCCTGTCCCATCATTGGAGTGCACTGGCCATCCCTCAGATTTGTCTaGGCTGGCCTGAGTGGTCACCGCTTTGAGAAAGCTGTTAGTTTC +
Preference number: 1 (lower is better)
Translates to: ACPIIGVHWPSLRFV*AGLSGHRFEKAVSF
Trigger: GAAACTAACAGCTTTCTCAAAGCGGTGACCACTCAGGCCAGCCCAGACAAATCTGAGGGATGGCCAGTGCACTCCAATGATGGGACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 90 bp ACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTaGACCAAAAGGTCACGTGTCTGTACCTCCTCATCTGCCTTTGAA +
Preference number: 1 (lower is better)
Translates to: TRAARHAGLVQVAPV*TKRSRVCTSSSAFE
Trigger: TTCAAAGGCAGATGAGGAGGTACAGACACGTGACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 90 bp TGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTaGCATCTAAGGCAAAAGGGAGATGCTGAGAAGGTCAACAGTACC +
Preference number: 1 (lower is better)
Translates to: CTNLGWTALLQTGGC*HLRQKGDAEKVNST
Trigger: GGTACTGTTGACCTTCTCAGCATCTCCCTTTTGCCTTAGATGGCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTaGTCTGTTGGTGAACAACTGTGTGGAGGAAGACCAGGGAGGCTG +
Preference number: 1 (lower is better)
Translates to: GSLSDTMLTLWLKEV*SVGEQLCGGRPGRL
Trigger: CAGCCTCCCTGGTCTTCCTCCACACAGTTGTTCACCAACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 90 bp GGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTaGCTGGGGAGAGTGAAGAGCAAAATAAGGTCAGGAGGAGGAAGA +
Preference number: 1 (lower is better)
Translates to: GPAVYAVHQSPQTLY*LGRVKSKIRSGGGR
Trigger: TCTTCCTCCTCCTGACCTTATTTTGCTCTTCACTCTCCCCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 90 bp CAAAGCCCTGCTCCTCGGCTAGTCCAGGGAAACTGGGCAGTAGTTTaGTTGTTACTGTTGTTGCTCATCCTGGTATTGGCAGATACGTTA +
Preference number: 1 (lower is better)
Translates to: QSPAPRLVQGNWAVV*LLLLLLILVLADTL
Trigger: TAACGTATCTGCCAATACCAGGATGAGCAACAACAGTAACAATCAAACTACTGCCCAGTTTCCCTGGACTAGCCGAGGAGCAGGGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 90 bp AGTGTGCACCAAAAGGTCACGTGTCTGTACCTCCTCATCTGCCTTTaGAGGGGTTTCAGCCTGTCTTTAAGAAAGGTTTCCTTTAGGCCC +
Preference number: 1 (lower is better)
Translates to: SVHQKVTCLYLLICL*RGFSLSLRKVSFRP
Trigger: GGGCCTAAAGGAAACCTTTCTTAAAGACAGGCTGAAACCCCTTCAAAGGCAGATGAGGAGGTACAGACACGTGACCTTTTGGTGCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 90 bp ACAGGCCCTGATGAGGAAATCGGAGATGGAAACCATTACGCAGAATaGACCAAGCGATTGGCTCTGGCCATTTCAAATCTTTCTGTAGGC +
Preference number: 1 (lower is better)
Translates to: TGPDEEIGDGNHYAE*TKRLALAISNLSVG
Trigger: GCCTACAGAAAGATTTGAAATGGCCAGAGCCAATCGCTTGGTGCATTCTGCGTAATGGTTTCCATCTCCGATTTCCTCATCAGGGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 90 bp CTCTTAAGCTACCTTGATCACGGTCTTGGCAAAGATACAGGCACCTaGGTATTCACAGGCCCTGATGAGGAAATCGGAGATGGAAACCAT +
Preference number: 1 (lower is better)
Translates to: LLSYLDHGLGKDTGT*VFTGPDEEIGDGNH
Trigger: ATGGTTTCCATCTCCGATTTCCTCATCAGGGCCTGTGAATACCCAGGTGCCTGTATCTTTGCCAAGACCGTGATCAAGGTAGCTTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 90 bp CACTTAACTTCATTCCCATTTCCATCAGCAGGAGAGAGGACAACTTaGAGAATATCCTCAACTGGGCTAATGGCTCCACATCTGCAGGGG +
Preference number: 1 (lower is better)
Translates to: HLTSFPFPSAGERTT*RISSTGLMAPHLQG
Trigger: CCCCTGCAGATGTGGAGCCATTAGCCCAGTTGAGGATATTCTCCAAGTTGTCCTCTCTCCTGCTGATGGAAATGGGAATGAAGTTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 90 bp AGTAACAACATTCAGTGGGTACACCTTGGGAAGAGGATACCTTCTTaGCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTG +
Preference number: 1 (lower is better)
Translates to: SNNIQWVHLGKRIPS*LGRPAGCTLIVFCV
Trigger: CACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATCCTCTTCCCAAGGTGTACCCACTGAATGTTGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 90 bp AGCGCCAGCTGTGCTGGTTGGAAAGCACATATTTTAGATGTCATCTaGCTCCAGGACATTTTAGATCACAGGTACTCAACTTCCAACAGA +
Preference number: 1 (lower is better)
Translates to: SASCAGWKAHILDVI*LQDILDHRYSTSNR
Trigger: TCTGTTGGAAGTTGAGTACCTGTGATCTAAAATGTCCTGGAGGCAGATGACATCTAAAATATGTGCTTTCCAACCAGCACAGCTGGCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 90 bp ATTCCCCTAAGAAATGGCTCTCTTTCCGATACTATGTTGACACTGTaGTTAAAGGAGGTCTGGTCTGTTGGTGAACAACTGTGTGGAGGA +
Preference number: 1 (lower is better)
Translates to: IPLRNGSLSDTMLTL*LKEVWSVGEQLCGG
Trigger: TCCTCCACACAGTTGTTCACCAACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCCATTTCTTAGGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 90 bp TTCACTGAACAGCATTTAACTCTTCCAAGTGTTGCATTTTCTGGCTaGTCTGGCTCATGTGAGAGGAGGACACTCTCTTCGTACACTTTC +
Preference number: 1 (lower is better)
Translates to: FTEQHLTLPSVAFSG*SGSCERRTLSSYTF
Trigger: GAAAGTGTACGAAGAGAGTGTCCTCCTCTCACATGAGCCAGATCAGCCAGAAAATGCAACACTTGGAAGAGTTAAATGCTGTTCAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 90 bp AAACAAAAACAGTGTTTTCTCCTGACCATCTCTCTTAAGCTACCTTaGTCACGGTCTTGGCAAAGATACAGGCACCTGGGTATTCACAGG +
Preference number: 1 (lower is better)
Translates to: KQKQCFLLTISLKLP*SRSWQRYRHLGIHR
Trigger: CCTGTGAATACCCAGGTGCCTGTATCTTTGCCAAGACCGTGATCAAGGTAGCTTAAGAGAGATGGTCAGGAGAAAACACTGTTTTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 90 bp ACATCCTTTCAAATTGCACACCAAGTTAAAGGATGTTCTCAGCAGTaGAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGT +
Preference number: 1 (lower is better)
Translates to: TSFQIAHQVKGCSQQ*NTHTCSKACWSCPS
Trigger: ACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACTGCTGAGAACATCCTTTAACTTGGTGTGCAATTTGAAAGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 90 bp CTAGCCCAGTTGGGGATTAGTGATAATCAATTCCCACTGAAATCATaGAGAGATGGTAAGTGGGGTTTACCTTCTCTGGAAATGAACTTT +
Preference number: 1 (lower is better)
Translates to: LAQLGISDNQFPLKS*RDGKWGLPSLEMNF
Trigger: AAAGTTCATTTCCAGAGAAGGTAAACCCCACTTACCATCTCTGCATGATTTCAGTGGGAATTGATTATCACTAATCCCCAACTGGGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 90 bp GAAACAATATTCCTTCAACTGAACCTAGATTGGAGAGCAAAACCCTaGGCACCAATAAACATTCAACAGCTTCCACTTTGTAATAGCAGC +
Preference number: 1 (lower is better)
Translates to: ETIFLQLNLDWRAKP*APINIQQLPLCNSS
Trigger: GCTGCTATTACAAAGTGGAAGCTGTTGAATGTTTATTGGTGCCCAGGGTTTTGCTCTCCAATCTAGGTTCAGTTGAAGGAATATTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 90 bp CTCAAAACAGTCTTAGAAACAATATTCCTTCAACTGAACCTAGATTaGAGAGCAAAACCCTGGGCACCAATAAACATTCAACAGCTTCCA +
Preference number: 1 (lower is better)
Translates to: LKTVLETIFLQLNLD*RAKPWAPINIQQLP
Trigger: TGGAAGCTGTTGAATGTTTATTGGTGCCCAGGGTTTTGCTCTCCAATCTAGGTTCAGTTGAAGGAATATTGTTTCTAAGACTGTTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 90 bp AGTACAATGCTTTTTATTACACACCCAATTGTTAATGAGAGGAAATaGAATCAGCAACTCCTTTCCACACTCTACATGGAATCAAGGAGA +
Preference number: 1 (lower is better)
Translates to: STMLFITHPIVNERK*NQQLLSTLYMESRR
Trigger: TCTCCTTGATTCCATGTAGAGTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAGCATTGTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 90 bp CATTTCAAATCTTTCTGTAGGCTGAGCCTTACCAGTGATTTAAGATaGAGTACAATGCTTTTTATTACACACCCAATTGTTAATGAGAGG +
Preference number: 1 (lower is better)
Translates to: HFKSFCRLSLTSDLR*STMLFITHPIVNER
Trigger: CCTCTCATTAACAATTGGGTGTGTAATAAAAAGCATTGTACTTCATCTTAAATCACTGGTAAGGCTCAGCCTACAGAAAGATTTGAAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCGTGACTGGGTTTGCCTaGCCCTTGCTGAGGTCCAGC +
Preference number: 2 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCVTGFA*PLLRSS
Trigger: GCTGGACCTCAGCAAGGGTCAGGCAAACCCAGTCAC...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCCCGTCCTGGGCCGACTaGAGACCAACTGTGTCCCAA +
Preference number: 2 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCPSWAD*RPTVSQ
Trigger: TTGGGACACAGTTGGTCTGCAGTCGGCCCAGGACGG...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCGCTGCTCTGGCCAGGTaGTTGGCATTCCTGCAGTTA +
Preference number: 2 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCAALAR*LAFLQL
Trigger: TAACTGCAGGAATGCCAAGCACCTGGCCAGAGCAGC...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCTGCCTTCCGAGTGACTaGGTTTGCCTGACCCTTGCT +
Preference number: 2 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCCLPSD*VCLTLA
Trigger: AGCAAGGGTCAGGCAAACCCAGTCACTCGGAAGGCA...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 90 bp GTCCCAGAGGCTATACAGAGGGAACTCTGTCTCCTCCTAAGCATATaGGGGCTGGGCTGCTCTGGCCAGGTGCTTGGCATTCCTGCAGTT +
Preference number: 2 (lower is better)
Translates to: VPEAIQRELCLLLSI*GLGCSGQVLGIPAV
Trigger: AACTGCAGGAATGCCAAGCACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTCTGTATAGCCTCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCGGAGTCTCAAAGCCCTaGTCCTCGGCTAGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVGVSKP*SSASPG
Trigger: CCCTGGACTAGCCGAGGAGCAGGGCTTTGAGACTCC...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCCCGTCCTGGGCCGACTaGAGACCAACTGTGTCCCAA +
Preference number: 2 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVPSWAD*RPTVSQ
Trigger: TTGGGACACAGTTGGTCTGCAGTCGGCCCAGGACGG...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCTGCCACAGGGTCACTTaGAGCAAAGGCCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVCHRVT*SKGLGL
Trigger: CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCA...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCACGTGCAGCAAGGCATaGTGGTCTTGTCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCTCSKA*WSCPSS
Trigger: GCTACTTGGACAAGACCAGCATGCCTTGCTGCACGT...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGGGGCTGGGCTGCTCTaGCCAGGTGCTTGGCATTCC +
Preference number: 2 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPGAGLL*PGAWHS
Trigger: GGAATGCCAAGCACCTGGCCAGAGCAGCCCAGCCCC...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGACTGGGCACTGGGCTTaGAGCTGCATCCCCCATACC +
Preference number: 2 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWTGHWA*SCIPHT
Trigger: GGTATGGGGGATGCAGCTTCAAGCCCAGTGCCCAGT...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCAGGAAGGTTGTGCAGTaGAAGGTTGACACGGTGAGA +
Preference number: 2 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCRKVVQ*KVDTVR
Trigger: TCTCACCGTGTCAACCTTGCACTGCACAACCTTCCT...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGTTAACAGGGAGACACTaGGCACTGGGCTTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLLTGRH*ALGLKL
Trigger: CAGCTTCAAGCCCAGTGCCCAGTGTCTCCCTGTTAA...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGCTCCCAGGTTGGTGTaGCACAGGTACCCTTGCACC +
Preference number: 2 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPAPRLV*HRYPCT
Trigger: GGTGCAAGGGTACCTGTGCCACACCAACCTGGGAGC...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 90 bp CAAAGAGGTGAACCAGCTGAAAGCTCTCGGGGAAGCTTACATGTGTaGTTAGGCCTGTCCCATCATTGGAGTGCACTGGCCATCCCTCAG +
Preference number: 2 (lower is better)
Translates to: QRGEPAESSRGSLHV*LGLSHHWSALAIPQ
Trigger: CTGAGGGATGGCCAGTGCACTCCAATGATGGGACAGGCCTAACAACACATGTAAGCTTCCCCGAGAGCTTTCAGCTGGTTCACCTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCAGCAGTCAGTTGTGCTaGGTAGACCGTCCTGGGCCG +
Preference number: 2 (lower is better)
Translates to: FHTLHGIKETAESRKDAASSQLC*VDRPGP
Trigger: CGGCCCAGGACGGTCTACTCAGCACAACTGACTGCT...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCATATTGGGGCTGGGCTaGTCTGGCCAGGTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: FHTLHGIKETAESRKDAAILGLG*SGQVLG
Trigger: GCCAAGCACCTGGCCAGAGCAGCCCAGCCCCAATAT...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTAACTTTAATGGGTCCTaGGCAAGTATGAGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGNFNGS*ASMRSV
Trigger: CACTGACCTCATACTTGCCCAGGACCCATTAAAGTT...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTAGCAGTCAGTTGTGCTaGGTAGACCGTCCTGGGCCG +
Preference number: 2 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLSSQLC*VDRPGP
Trigger: CGGCCCAGGACGGTCTACTCAGCACAACTGACTGCT...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTACTGGGCACTGGGCTTaGAGCTGCATCCCCCATACC +
Preference number: 2 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSTGHWA*SCIPHT
Trigger: GGTATGGGGGATGCAGCTTCAAGCCCAGTGCCCAGT...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCGTTGCATTTTCTGGCTaGTCTGGCTCATGTGAGAGG +
Preference number: 2 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVVAFSG*SGSCER
Trigger: CCTCTCACATGAGCCAGATCAGCCAGAAAATGCAAC...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCGATTGTTACTGTTGTTaGTCATCCTGGTATTGGCAG +
Preference number: 2 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCDCYCC*SSWYWQ
Trigger: CTGCCAATACCAGGATGAGCAACAACAGTAACAATC...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTATATTGGGGCTGGGCTaGTCTGGCCAGGTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVILGLG*SGQVLG
Trigger: GCCAAGCACCTGGCCAGAGCAGCCCAGCCCCAATAT...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTTGCCACAGGGTCACTTaGAGCAAAGGCCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: NLQWGHLQLCFYHSLECACHRVT*SKGLGL
Trigger: CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCA...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGCCGAGTGACTGGGTTTaGCTGACCCTTGCTGAGGTC +
Preference number: 2 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLPSDWV*LTLAEV
Trigger: GACCTCAGCAAGGGTCAGGCAAACCCAGTCACTCGG...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGCTGAGTAGACCGTCCTaGGCCGACTGCAGACCAACT +
Preference number: 2 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLLSRPS*ADCRPT
Trigger: AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAG...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTCTGAGTAGACCGTCCTaGGCCGACTGCAGACCAACT +
Preference number: 2 (lower is better)
Translates to: DTFLPGETSWVHINSILCLSRPS*ADCRPT
Trigger: AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAG...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCGCTCCCAGGTTGGTGTaGCACAGGTACCCTTGCACC +
Preference number: 2 (lower is better)
Translates to: FHLKPGSHHHALLISLFSAPRLV*HRYPCT
Trigger: GGTGCAAGGGTACCTGTGCCACACCAACCTGGGAGC...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCAGGGACATGTACAAATaGCCTTCCATCCATGATTCA +
Preference number: 2 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCRDMYK*PSIHDS
Trigger: TGAATCATGGATGGAAGGCCATTTGTACATGTCCCT...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGGTTGCATTTTCTGGCTaGTCTGGCTCATGTGAGAGG +
Preference number: 2 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWVAFSG*SGSCER
Trigger: CCTCTCACATGAGCCAGATCAGCCAGAAAATGCAAC...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTAGGTACCCTTGCACCTaGAGCCCACTAGCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVRYPCT*SPLAWQ
Trigger: CTGCCAAGCTAGTGGGCTTCAGGTGCAAGGGTACCT...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCAGTCAACACAATAGATaGCGAACCCTGATAGTGGCC +
Preference number: 2 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVSQHNR*RTLIVA
Trigger: GGCCACTATCAGGGTTCGTCATCTATTGTGTTGACT...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCGTTAATGAGAGGAAATaGAATCAGCAACTCCTTTCC +
Preference number: 2 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCVNERK*NQQLLS
Trigger: GGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAAC...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAACCGAGTGACTGGGTTTaGCTGACCCTTGCTGAGGTC +
Preference number: 2 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKPSDWV*LTLAEV
Trigger: GACCTCAGCAAGGGTCAGGCAAACCCAGTCACTCGG...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGAAGAGGATACCTTCTTaGCTGGGGAGACCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLKRIPS*LGRPAG
Trigger: CCCAGCTGGTCTCCCCAGGCAAGAAGGTATCCTCTT...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGCCCTTCTGCAAATACTaGGTGTGGGAGAAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWPFCKY*VWEKQK
Trigger: CTTCTGCTTCTCCCACACCCAGTATTTGCAGAAGGG...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCACCACAGACGCTTTATTaGCTGGGGAGAGTGAAGAGC +
Preference number: 2 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPPQTLY*LGRVKS
Trigger: GCTCTTCACTCTCCCCAGCCAATAAAGCGTCTGTGG...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCCCTGGGGAGACCAGCTaGGTGCACATTAATAGTATT +
Preference number: 2 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVPGETS*VHINSI
Trigger: AATACTATTAATGTGCACCCAGCTGGTCTCCCCAGG...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAAGGATACCTTCTTGCCTaGGGAGACCAGCTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKGYLLA*GDQLGA
Trigger: TGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATCC...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCGGATACCTTCTTGCCTaGGGAGACCAGCTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: FHLKPGSHHHALLISLFSGYLLA*GDQLGA
Trigger: TGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATCC...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCTCCTTTGTGATGTACTaGACATGTCTCAAAACAGTC +
Preference number: 2 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCSFVMY*TCLKTV
Trigger: GACTGTTTTGAGACATGTCCAGTACATCACAAAGGA...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 90 bp AGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATaGGCTGGGGAGAGTGAAGAGCAAAATAAGGTCAGGAGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: RSSCLCCSPIATDAL*AGESEEQNKVRRRK
Trigger: CTTCCTCCTCCTGACCTTATTTTGCTCTTCACTCTCCCCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGCTGATCTGGCTCATGTaGGAGGAGGACACTCTCTTC +
Preference number: 2 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLLIWLM*EEDTLF
Trigger: GAAGAGAGTGTCCTCCTCTCACATGAGCCAGATCAG...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTCTGATCTGGCTCATGTaGGAGGAGGACACTCTCTTC +
Preference number: 2 (lower is better)
Translates to: DTFLPGETSWVHINSILCLIWLM*EEDTLF
Trigger: GAAGAGAGTGTCCTCCTCTCACATGAGCCAGATCAG...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGGAGTCTCAAAGCCCTaGTCCTCGGCTAGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRGVSKP*SSASPG
Trigger: CCCTGGACTAGCCGAGGAGCAGGGCTTTGAGACTCC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCGCTGCTCTGGCCAGGTaGTTGGCATTCCTGCAGTTA +
Preference number: 2 (lower is better)
Translates to: FHLKPGSHHHALLISLFSAALAR*LAFLQL
Trigger: TAACTGCAGGAATGCCAAGCACCTGGCCAGAGCAGC...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTGCTGCTCTGGCCAGGTaGTTGGCATTCCTGCAGTTA +
Preference number: 2 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLAALAR*LAFLQL
Trigger: TAACTGCAGGAATGCCAAGCACCTGGCCAGAGCAGC...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTGCAGCTTTGCCCTTCTaGAAATACTGGGTGTGGGAG +
Preference number: 2 (lower is better)
Translates to: DTFLPGETSWVHINSILCAALPF*KYWVWE
Trigger: CTCCCACACCCAGTATTTGCAGAAGGGCAAAGCTGC...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCGGGAGACCAGCTGGGTaGACATTAATAGTATTCTGT +
Preference number: 2 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVGRPAG*TLIVFC
Trigger: ACAGAATACTATTAATGTGCACCCAGCTGGTCTCCC...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCTTCCCACTGAAATCATaGAGAGATGGTAAGTGGGGT +
Preference number: 2 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVFPLKS*RDGKWG
Trigger: ACCCCACTTACCATCTCTGCATGATTTCAGTGGGAA...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGAAAGATACAGGCACCTaGGTATTCACAGGCCCTGAT +
Preference number: 2 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWKDTGT*VFTGPD
Trigger: ATCAGGGCCTGTGAATACCCAGGTGCCTGTATCTTT...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAATGCCTTCCGAGTGACTaGGTTTGCCTGACCCTTGCT +
Preference number: 2 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKCLPSD*VCLTLA
Trigger: AGCAAGGGTCAGGCAAACCCAGTCACTCGGAAGGCA...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCGAGAATATCCTCAACTaGGCTAATGGCTCCACATCT +
Preference number: 2 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVENILN*ANGSTS
Trigger: AGATGTGGAGCCATTAGCCCAGTTGAGGATATTCTC...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCCGGGCTGCACTAATCTaGGTTGGACTGCTCTGCTAC +
Preference number: 2 (lower is better)
Translates to: FHLKPGSHHHALLISLFSRAALI*VGLLCY
Trigger: GTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCG...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 90 bp TCAAAGCCCTGCTCCTCGGCTAGTCCAGGGAAACTGGGCAGTAGTTaGATTGTTACTGTTGTTGCTCATCCTGGTATTGGCAGATACGTT +
Preference number: 2 (lower is better)
Translates to: SKPCSSASPGKLGSS*IVTVVAHPGIGRYV
Trigger: AACGTATCTGCCAATACCAGGATGAGCAACAACAGTAACAATCAAACTACTGCCCAGTTTCCCTGGACTAGCCGAGGAGCAGGGCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCGTTGCATTTTCTGGCTaGTCTGGCTCATGTGAGAGG +
Preference number: 2 (lower is better)
Translates to: FHTLHGIKETAESRKDAAVAFSG*SGSCER
Trigger: CCTCTCACATGAGCCAGATCAGCCAGAAAATGCAAC...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAAGGTCCAGCTGTTTATaGTGTTCACCAATCGCCACA +
Preference number: 2 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPRSSCL*CSPIAT
Trigger: TGTGGCGATTGGTGAACAGCATAAACAGCTGGACCT...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAACGTGCAGCAAGGCATaGTGGTCTTGTCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQTCSKA*WSCPSS
Trigger: GCTACTTGGACAAGACCAGCATGCCTTGCTGCACGT...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAATTAACAGGGAGACACTaGGCACTGGGCTTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQLTGRH*ALGLKL
Trigger: CAGCTTCAAGCCCAGTGCCCAGTGTCTCCCTGTTAA...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAATTAACAGGGAGACACTaGGCACTGGGCTTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKLTGRH*ALGLKL
Trigger: CAGCTTCAAGCCCAGTGCCCAGTGTCTCCCTGTTAA...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGAATGCACCAAGCGATTaGCTCTGGCCATTTCAAATC +
Preference number: 2 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWNAPSD*LWPFQI
Trigger: GATTTGAAATGGCCAGAGCCAATCGCTTGGTGCATT...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGCCCTTCTGCAAATACTaGGTGTGGGAGAAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLPFCKY*VWEKQK
Trigger: CTTCTGCTTCTCCCACACCCAGTATTTGCAGAAGGG...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCACCTGGGGAGACCAGCTaGGTGCACATTAATAGTATT +
Preference number: 2 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPPGETS*VHINSI
Trigger: AATACTATTAATGTGCACCCAGCTGGTCTCCCCAGG...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAATGCAGCAAGGCATGCTaGTCTTGTCCAAGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQCSKAC*SCPSSS
Trigger: GGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 90 bp GATGAGAGTATCATGTCTGAGAATCCACTGTTGCCACAGGGTCACTaGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTA +
Preference number: 2 (lower is better)
Translates to: DESIMSENPLLPQGH*QQRPGAEIFTEQHL
Trigger: TAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACATGATACTCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTGTGTTTTTCAGGGCTaGCAGCCCTCTACCTTCATC +
Preference number: 2 (lower is better)
Translates to: FHLKPGSHHHALLISLFSCVFQG*QPSTFI
Trigger: GATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACA...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAACCCCGATCTCCTTTGTaGTGTACTGGACATGTCTCA +
Preference number: 2 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQPRSPL*CTGHVS
Trigger: TGAGACATGTCCAGTACATCACAAAGGAGATCGGGG...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCACAACAAACTGGTAAATaGCCCCCAGAGCTGAGAAAT +
Preference number: 2 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPQQTGK*PPELRN
Trigger: ATTTCTCAGCTCTGGGGGTCATTTACCAGTTTGTTG...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTCCGTCCTGGGCCGACTaGAGACCAACTGTGTCCCAA +
Preference number: 2 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVPSWAD*RPTVSQ
Trigger: TTGGGACACAGTTGGTCTGCAGTCGGCCCAGGACGG...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAAGGAAGGTTGTGCAGTaGAAGGTTGACACGGTGAGA +
Preference number: 2 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQRKVVQ*KVDTVR
Trigger: TCTCACCGTGTCAACCTTGCACTGCACAACCTTCCT...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTCAAGTAGCTCCAGTGTaGACCAAAAGGTCACGTGTC +
Preference number: 2 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVQVAPV*TKRSRV
Trigger: GACACGTGACCTTTTGGTGCACACTGGAGCTACTTG...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCCAAGTAGCTCCAGTGTaGACCAAAAGGTCACGTGTC +
Preference number: 2 (lower is better)
Translates to: FHLKPGSHHHALLISLFSQVAPV*TKRSRV
Trigger: GACACGTGACCTTTTGGTGCACACTGGAGCTACTTG...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCACCAAGCGATTGGCTCTaGCCATTTCAAATCTTTCTG +
Preference number: 2 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPPSDWL*PFQIFL
Trigger: CAGAAAGATTTGAAATGGCCAGAGCCAATCGCTTGG...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGTCAGTGGGTACACCTTaGGAAGAGGATACCTTCTTG +
Preference number: 2 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLSVGTP*EEDTFL
Trigger: CAAGAAGGTATCCTCTTCCCAAGGTGTACCCACTGA...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAAGTAACAACATTCAGTaGGTACACCTTGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPSNNIQ*VHLGKR
Trigger: CCTCTTCCCAAGGTGTACCCACTGAATGTTGTTACT...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGAGAATATCCTCAACTaGGCTAATGGCTCCACATCT +
Preference number: 2 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPENILN*ANGSTS
Trigger: AGATGTGGAGCCATTAGCCCAGTTGAGGATATTCTC...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 90 bp AAGAGTTGCAAATATGATGAGAGTATCATGTCTGAGAATCCACTGTaGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGAAATCTTC +
Preference number: 2 (lower is better)
Translates to: KSCKYDESIMSENPL*PQGHLQQRPGAEIF
Trigger: GAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACATGATACTCTCATCATATTTGCAACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTTCTCTTAAGCTACCTTaGTCACGGTCTTGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: DTFLPGETSWVHINSILCSLKLP*SRSWQR
Trigger: TCTTTGCCAAGACCGTGATCAAGGTAGCTTAAGAGA...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTTGTGCAGTGCAAGGTTaGCACGGTGAGATCAATATT +
Preference number: 2 (lower is better)
Translates to: DTFLPGETSWVHINSILCCAVQG*HGEINI
Trigger: AATATTGATCTCACCGTGTCAACCTTGCACTGCACA...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTAGTCAACACAATAGATaGCGAACCCTGATAGTGGCC +
Preference number: 2 (lower is better)
Translates to: NLQWGHLQLCFYHSLECASQHNR*RTLIVA
Trigger: GGCCACTATCAGGGTTCGTCATCTATTGTGTTGACT...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAAAACCATTACGCAGAATaGACCAAGCGATTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKNHYAE*TKRLAL
Trigger: CAGAGCCAATCGCTTGGTGCATTCTGCGTAATGGTT...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTAACTTTAATGGGTCCTaGGCAAGTATGAGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: DTFLPGETSWVHINSILCNFNGS*ASMRSV
Trigger: CACTGACCTCATACTTGCCCAGGACCCATTAAAGTT...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGAGTAACAACATTCAGTaGGTACACCTTGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLSNNIQ*VHLGKR
Trigger: CCTCTTCCCAAGGTGTACCCACTGAATGTTGTTACT...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGGAGAATATCCTCAACTaGGCTAATGGCTCCACATCT +
Preference number: 2 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLENILN*ANGSTS
Trigger: AGATGTGGAGCCATTAGCCCAGTTGAGGATATTCTC...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCGGAGAGAGGACAACTTaGAGAATATCCTCAACTGGG +
Preference number: 2 (lower is better)
Translates to: FHLKPGSHHHALLISLFSGERTT*RISSTG
Trigger: CCCAGTTGAGGATATTCTCCAAGTTGTCCTCTCTCC...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTGCACTAATCTGGGTTaGACTGCTCTGCTACAGACT +
Preference number: 2 (lower is better)
Translates to: FHLKPGSHHHALLISLFSCTNLG*TALLQT
Trigger: AGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCA...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCAGCAGTCAGTTGTGCTaGGTAGACCGTCCTGGGCCG +
Preference number: 2 (lower is better)
Translates to: KCERFKFFRPLNFIPISISSQLC*VDRPGP
Trigger: CGGCCCAGGACGGTCTACTCAGCACAACTGACTGCT...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAATCTCTTAAGCTACCTTaGTCACGGTCTTGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKSLKLP*SRSWQR
Trigger: TCTTTGCCAAGACCGTGATCAAGGTAGCTTAAGAGA...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGTGCCAAACTTCACCCTaGTCCTCTCTCTTAAGCAGC +
Preference number: 2 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRCQTSP*SSLLSS
Trigger: GCTGCTTAAGAGAGAGGATCAGGGTGAAGTTTGGCA...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGTGTGTTTTTCAGGGCTaGCAGCCCTCTACCTTCATC +
Preference number: 2 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRCVFQG*QPSTFI
Trigger: GATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACA...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTATATTGGGGCTGGGCTaGTCTGGCCAGGTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: LFITHPIVNERKCNQQLLILGLG*SGQVLG
Trigger: GCCAAGCACCTGGCCAGAGCAGCCCAGCCCCAATAT...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTAACTCTTCCAAGTGTTaGATTTTCTGGCTGATCTGG +
Preference number: 2 (lower is better)
Translates to: DTFLPGETSWVHINSILCNSSKC*IFWLIW
Trigger: CCAGATCAGCCAGAAAATGCAACACTTGGAAGAGTT...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTTCCCACTGAAATCATaGAGAGATGGTAAGTGGGGT +
Preference number: 2 (lower is better)
Translates to: FHLKPGSHHHALLISLFSFPLKS*RDGKWG
Trigger: ACCCCACTTACCATCTCTGCATGATTTCAGTGGGAA...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAAAACTTTAATGGGTCCTaGGCAAGTATGAGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKNFNGS*ASMRSV
Trigger: CACTGACCTCATACTTGCCCAGGACCCATTAAAGTT...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCCCAAGCGATTGGCTCTaGCCATTTCAAATCTTTCTG +
Preference number: 2 (lower is better)
Translates to: FHLKPGSHHHALLISLFSPSDWL*PFQIFL
Trigger: CAGAAAGATTTGAAATGGCCAGAGCCAATCGCTTGG...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGTGGAGAGCAAAACCCTaGGCACCAATAAACATTCAA +
Preference number: 2 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLWRAKP*APINIQ
Trigger: TTGAATGTTTATTGGTGCCCAGGGTTTTGCTCTCCA...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTGCAGAGATGGTAAGTaGGGTTTACCTTCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: FHLKPGSHHHALLISLFSCRDGK*GLPSLE
Trigger: TTCCAGAGAAGGTAAACCCCACTTACCATCTCTGCA...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTGAGACTAATCTACAATaGGGACACCTTCAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVETNLQ*GHLQLC
Trigger: ACAGAGCTGAAGGTGTCCCCATTGTAGATTAGTCTC...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAGAGACTAATCTACAATaGGGACACCTTCAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQETNLQ*GHLQLC
Trigger: ACAGAGCTGAAGGTGTCCCCATTGTAGATTAGTCTC...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAGCAAGGTTGACACGGTaGGATCAATATTTGAGAGAT +
Preference number: 2 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQARLTR*DQYLRD
Trigger: ATCTCTCAAATATTGATCTCACCGTGTCAACCTTGC...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGAGTCAACACAATAGATaGCGAACCCTGATAGTGGCC +
Preference number: 2 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRSQHNR*RTLIVA
Trigger: GGCCACTATCAGGGTTCGTCATCTATTGTGTTGACT...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTTGCCTTTTAAATGTCTaGCCTGTGTGTTTTTCAGGG +
Preference number: 2 (lower is better)
Translates to: NLQWGHLQLCFYHSLECACLLNV*PVCFSG
Trigger: CCCTGAAAAACACACAGGTCAGACATTTAAAAGGCA...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTGATTGTTACTGTTGTTaGTCATCCTGGTATTGGCAG +
Preference number: 2 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSDCYCC*SSWYWQ
Trigger: CTGCCAATACCAGGATGAGCAACAACAGTAACAATC...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCCCGAGTGACTGGGTTTaGCTGACCCTTGCTGAGGTC +
Preference number: 2 (lower is better)
Translates to: KCERFKFFRPLNFIPISIPSDWV*LTLAEV
Trigger: GACCTCAGCAAGGGTCAGGCAAACCCAGTCACTCGG...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCGGATACCTTCTTGCCTaGGGAGACCAGCTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: KCERFKFFRPLNFIPISIGYLLA*GDQLGA
Trigger: TGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATCC...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTAGGGACATGTACAAATaGCCTTCCATCCATGATTCA +
Preference number: 2 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVRDMYK*PSIHDS
Trigger: TGAATCATGGATGGAAGGCCATTTGTACATGTCCCT...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGTGTGCAGTGCAAGGTTaGCACGGTGAGATCAATATT +
Preference number: 2 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRCAVQG*HGEINI
Trigger: AATATTGATCTCACCGTGTCAACCTTGCACTGCACA...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCGTTAATGAGAGGAAATaGAATCAGCAACTCCTTTCC +
Preference number: 2 (lower is better)
Translates to: FHLKPGSHHHALLISLFSVNERK*NQQLLS
Trigger: GGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAAC...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 90 bp AACTGTTTTATTCCCCTAAGAAATGGCTCTCTTTCCGATACTATGTaGACACTGTGGTTAAAGGAGGTCTGGTCTGTTGGTGAACAACTG +
Preference number: 2 (lower is better)
Translates to: NCFIPLRNGSLSDTM*TLWLKEVWSVGEQL
Trigger: CAGTTGTTCACCAACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCCATTTCTTAGGGGAATAAAACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTATAATCAATTCCCACTaGAATCATGCAGAGATGGTA +
Preference number: 2 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAIINSH*NHAEMV
Trigger: TACCATCTCTGCATGATTTCAGTGGGAATTGATTAT...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTAGAAAAGGCAGTTTTTaGCCCATTAATAAACCCTGT +
Preference number: 2 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVRKGSF*PINKPC
Trigger: ACAGGGTTTATTAATGGGGCAAAAACTGCCTTTTCT...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTAGAAAAGGCAGTTTTTaGCCCATTAATAAACCCTGT +
Preference number: 2 (lower is better)
Translates to: NLQWGHLQLCFYHSLECARKGSF*PINKPC
Trigger: ACAGGGTTTATTAATGGGGCAAAAACTGCCTTTTCT...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAATATTCCCCTAAGAAATaGCTCTCTTTCCGATACTAT +
Preference number: 2 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQYSPKK*LSFRYY
Trigger: ATAGTATCGGAAAGAGAGCCATTTCTTAGGGGAATA...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCTGCCAAACTTCACCCTaGTCCTCTCTCTTAAGCAGC +
Preference number: 2 (lower is better)
Translates to: KCERFKFFRPLNFIPISICQTSP*SSLLSS
Trigger: GCTGCTTAAGAGAGAGGATCAGGGTGAAGTTTGGCA...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCCCCCGATCTCCTTTGTaGTGTACTGGACATGTCTCA +
Preference number: 2 (lower is better)
Translates to: KCERFKFFRPLNFIPISIPRSPL*CTGHVS
Trigger: TGAGACATGTCCAGTACATCACAAAGGAGATCGGGG...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACAACTCTTCCAAGTGTTaGATTTTCTGGCTGATCTGG +
Preference number: 2 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHNSSKC*IFWLIW
Trigger: CCAGATCAGCCAGAAAATGCAACACTTGGAAGAGTT...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGTTAATGAGAGGAAATaGAATCAGCAACTCCTTTCC +
Preference number: 2 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRVNERK*NQQLLS
Trigger: GGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAAC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCAGGCTGGTAAAATTATaGCTATTGGGCAATATTTTG +
Preference number: 2 (lower is better)
Translates to: FHLKPGSHHHALLISLFSRLVKL*LLGNIL
Trigger: CAAAATATTGCCCAATAGCCATAATTTTACCAGCCT...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAAGGCTGGTAAAATTATaGCTATTGGGCAATATTTTG +
Preference number: 2 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQRLVKL*LLGNIL
Trigger: CAAAATATTGCCCAATAGCCATAATTTTACCAGCCT...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 90 bp TCTCAAAACAGTCTTAGAAACAATATTCCTTCAACTGAACCTAGATaGGAGAGCAAAACCCTGGGCACCAATAAACATTCAACAGCTTCC +
Preference number: 2 (lower is better)
Translates to: SQNSLRNNIPSTEPR*ESKTLGTNKHSTAS
Trigger: GGAAGCTGTTGAATGTTTATTGGTGCCCAGGGTTTTGCTCTCCAATCTAGGTTCAGTTGAAGGAATATTGTTTCTAAGACTGTTTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTAAAAGATGCAGCCATTaGTGGAGCCCAGGAAACTTC +
Preference number: 2 (lower is better)
Translates to: LFITHPIVNERKCNQQLLKRCSH*WSPGNF
Trigger: GAAGTTTCCTGGGCTCCATCAATGGCTGCATCTTTT...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCAAAAGATGCAGCCATTaGTGGAGCCCAGGAAACTTC +
Preference number: 2 (lower is better)
Translates to: KCERFKFFRPLNFIPISIKRCSH*WSPGNF
Trigger: GAAGTTTCCTGGGCTCCATCAATGGCTGCATCTTTT...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGCACCAGAAAGAATTTTaGCAAGGGACATGTACAAAT +
Preference number: 2 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRHQKEF*QGTCTN
Trigger: ATTTGTACATGTCCCTTGGCAAAATTCTTTCTGGTG...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCCCTGGGGAGACCAGCTaGGTGCACATTAATAGTATT +
Preference number: 2 (lower is better)
Translates to: KCERFKFFRPLNFIPISIPGETS*VHINSI
Trigger: AATACTATTAATGTGCACCCAGCTGGTCTCCCCAGG...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR TCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCTGTGCAGTGCAAGGTTaGCACGGTGAGATCAATATT +
Preference number: 2 (lower is better)
Translates to: KCERFKFFRPLNFIPISICAVQG*HGEINI
Trigger: AATATTGATCTCACCGTGTCAACCTTGCACTGCACA...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCAATGCACCAAGCGATTaGCTCTGGCCATTTCAAATC +
Preference number: 2 (lower is better)
Translates to: KCERFKFFRPLNFIPISINAPSD*LWPFQI
Trigger: GATTTGAAATGGCCAGAGCCAATCGCTTGGTGCATT...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR GCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTGATTGTTACTGTTGTTaGTCATCCTGGTATTGGCAG +
Preference number: 2 (lower is better)
Translates to: LFITHPIVNERKCNQQLLDCYCC*SSWYWQ
Trigger: CTGCCAATACCAGGATGAGCAACAACAGTAACAATC...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 90 bp AAAACATTTCTCTGTAGCATTTGGGTAGCTGGGAAGGGAATTACATaGAGAAAATATTTCTTAGGCTACGATGTATCATTATACTGGGAA +
Preference number: 2 (lower is better)
Translates to: KTFLCSIWVAGKGIT*RKYFLGYDVSLYWE
Trigger: TTCCCAGTATAATGATACATCGTAGCCTAAGAAATATTTTCTCAATGTAATTCCCTTCCCAGCTACCCAAATGCTACAGAGAAATGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 72 bp GCTCCCAGGTTGGTGTGGCACAGGTACCCTTGCACCTaGAGCCCACTAGCTTGGCAGCTCACACAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: APRLVWHRYPCT*SPLAWQLTQLP
Trigger: AGGCAGCTGTGTGAGCTGCCAAGCTAGTGGGCTTCAGGTGCAAGGGTACCTGTGCCACACCAACCTGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 72 bp GGAAGACCAGGGAGGCTGCACCCTAAGCCTCCGGGCTaGACTAATCTGGGTTGGACTGCTCTGCTACAGACT +
Preference number: 3 (lower is better)
Translates to: GRPGRLHPKPPG*TNLGWTALLQT
Trigger: AGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGGAGGCTTAGGGTGCAGCCTCCCTGGTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 72 bp GGAGGCTGCACCCTAAGCCTCCGGGCTGCACTAATCTaGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTT +
Preference number: 3 (lower is better)
Translates to: GGCTLSLRAALI*VGLLCYRLEGV
Trigger: AACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGGAGGCTTAGGGTGCAGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 72 bp GGCAGCTCACACAGCTGCCTTCCGAGTGACTGGGTTTaGCTGACCCTTGCTGAGGTCCAGCTGTTTATGCTG +
Preference number: 3 (lower is better)
Translates to: GSSHSCLPSDWV*LTLAEVQLFML
Trigger: CAGCATAAACAGCTGGACCTCAGCAAGGGTCAGGCAAACCCAGTCACTCGGAAGGCAGCTGTGTGAGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 72 bp GCACTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTaGGCCGACTGCAGACCAACTGTGTCCCAACAGGAG +
Preference number: 3 (lower is better)
Translates to: ALKQSVVLSRPS*ADCRPTVSQQE
Trigger: CTCCTGTTGGGACACAGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 72 bp CTGCACCCTAAGCCTCCGGGCTGCACTAATCTGGGTTaGACTGCTCTGCTACAGACTGGAGGGTGTTGCCAT +
Preference number: 3 (lower is better)
Translates to: LHPKPPGCTNLG*TALLQTGGCCH
Trigger: ATGGCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGGAGGCTTAGGGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 72 bp CAGACCAACTGTGTCCCAACAGGAGTCTCAAAGCCCTaGTCCTCGGCTAGTCCAGGGAAACTGGGCAGTAGT +
Preference number: 3 (lower is better)
Translates to: QTNCVPTGVSKP*SSASPGKLGSS
Trigger: ACTACTGCCCAGTTTCCCTGGACTAGCCGAGGAGCAGGGCTTTGAGACTCCTGTTGGGACACAGTTGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 72 bp CAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTaGAGACCAACTGTGTCCCAACAGGAGTCTCAAAGC +
Preference number: 3 (lower is better)
Translates to: QSVVLSRPSWAD*RPTVSQQESQS
Trigger: GCTTTGAGACTCCTGTTGGGACACAGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 72 bp TTGGTGAACAACTGTGTGGAGGAAGACCAGGGAGGCTaGACCCTAAGCCTCCGGGCTGCACTAATCTGGGTT +
Preference number: 3 (lower is better)
Translates to: LVNNCVEEDQGG*TLSLRAALIWV
Trigger: AACCCAGATTAGTGCAGCCCGGAGGCTTAGGGTGCAGCCTCCCTGGTCTTCCTCCACACAGTTGTTCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCGAAGAGGATACCTTCTaGCCTGGGGAGACCAGCTGG +
Preference number: 3 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVEEDTF*PGETSW
Trigger: CCAGCTGGTCTCCCCAGGCAAGAAGGTATCCTCTTC...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCTCAACTGAACCTAGATaGGAGAGCAAAACCCTGGGC +
Preference number: 3 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCSTEPR*ESKTLG
Trigger: GCCCAGGGTTTTGCTCTCCAATCTAGGTTCAGTTGA...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 72 bp GAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTaGTCTGGCCAGGTGCTTGGCATTCCTGCAGTTAAC +
Preference number: 3 (lower is better)
Translates to: ELCLLLSILGLG*SGQVLGIPAVN
Trigger: GTTAACTGCAGGAATGCCAAGCACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCTTCAGTGGGTACACCTaGGGAAGAGGATACCTTCTT +
Preference number: 3 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCFSGYT*GRGYLL
Trigger: AAGAAGGTATCCTCTTCCCAAGGTGTACCCACTGAA...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 72 bp TGCACTGGCCATCCCTCAGATTTGTCTGGGCTGGCCTaGGTGGTCACCGCTTTGAGAAAGCTGTTAGTTTCC +
Preference number: 3 (lower is better)
Translates to: CTGHPSDLSGLA*VVTALRKLLVS
Trigger: GGAAACTAACAGCTTTCTCAAAGCGGTGACCACTCAGGCCAGCCCAGACAAATCTGAGGGATGGCCAGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 72 bp CTTACATGTGTTGTTAGGCCTGTCCCATCATTGGAGTaGACTGGCCATCCCTCAGATTTGTCTGGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: LTCVVRPVPSLE*TGHPSDLSGLA
Trigger: GGCCAGCCCAGACAAATCTGAGGGATGGCCAGTGCACTCCAATGATGGGACAGGCCTAACAACACATGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 72 bp GGGTGCACATTAATAGTATTCTGTGTGCTCCCAGGTTaGTGTGGCACAGGTACCCTTGCACCTGAAGCCCAC +
Preference number: 3 (lower is better)
Translates to: GCTLIVFCVLPG*CGTGTLAPEAH
Trigger: GTGGGCTTCAGGTGCAAGGGTACCTGTGCCACACCAACCTGGGAGCACACAGAATACTATTAATGTGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 72 bp ATCATTGGAGTGCACTGGCCATCCCTCAGATTTGTCTaGGCTGGCCTGAGTGGTCACCGCTTTGAGAAAGCT +
Preference number: 3 (lower is better)
Translates to: IIGVHWPSLRFV*AGLSGHRFEKA
Trigger: AGCTTTCTCAAAGCGGTGACCACTCAGGCCAGCCCAGACAAATCTGAGGGATGGCCAGTGCACTCCAATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCCACTGGGCACTGGGCTaGAAGCTGCATCCCCCATAC +
Preference number: 3 (lower is better)
Translates to: FHTLHGIKETAESRKDAAHWALG*KLHPPY
Trigger: GTATGGGGGATGCAGCTTCAAGCCCAGTGCCCAGTG...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 72 bp GTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTGGTaGACAACTGTGTGGAGGAAGACCAGGGAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: VDTVVKGGLVCW*TTVWRKTREAA
Trigger: TGCAGCCTCCCTGGTCTTCCTCCACACAGTTGTTCACCAACAGACCAGACCTCCTTTAACCACAGTGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 72 bp GCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTaGACCAAAAGGTCACGTGTCTGTACCTCCTCATCT +
Preference number: 3 (lower is better)
Translates to: ARHAGLVQVAPV*TKRSRVCTSSS
Trigger: AGATGAGGAGGTACAGACACGTGACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 72 bp GGAAGCTTACATGTGTTGTTAGGCCTGTCCCATCATTaGAGTGCACTGGCCATCCCTCAGATTTGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: GSLHVLLGLSHH*SALAIPQICLG
Trigger: GCCCAGACAAATCTGAGGGATGGCCAGTGCACTCCAATGATGGGACAGGCCTAACAACACATGTAAGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCTTGCTCATCCTGGTATaGGCAGATACGTTAAATACC +
Preference number: 3 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCLLILV*ADTLNT
Trigger: GGTATTTAACGTATCTGCCAATACCAGGATGAGCAA...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCCACTGGGCACTGGGCTaGAAGCTGCATCCCCCATAC +
Preference number: 3 (lower is better)
Translates to: FHLKPGSHHHALLISLFSHWALG*KLHPPY
Trigger: GTATGGGGGATGCAGCTTCAAGCCCAGTGCCCAGTG...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAATTGCCACAGGGTCACTaGCAGCAAAGGCCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKLPQGH*QQRPGA
Trigger: AGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAA...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTGTGGCACAGGTACCCTaGCACCTGAAGCCCACTAGC +
Preference number: 3 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVVAQVP*HLKPTS
Trigger: GCTAGTGGGCTTCAGGTGCAAGGGTACCTGTGCCAC...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCGTGGCACAGGTACCCTaGCACCTGAAGCCCACTAGC +
Preference number: 3 (lower is better)
Translates to: FHLKPGSHHHALLISLFSVAQVP*HLKPTS
Trigger: GCTAGTGGGCTTCAGGTGCAAGGGTACCTGTGCCAC...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 72 bp TCATGTCTGAGAATCCACTGTTGCCACAGGGTCACTTaGAGCAAAGGCCTGGGGCTGAAATCTTCACTGAAC +
Preference number: 3 (lower is better)
Translates to: SCLRIHCCHRVT*SKGLGLKSSLN
Trigger: GTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGTTGCCACAGGGTCACTaGCAGCAAAGGCCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRLPQGH*QQRPGA
Trigger: AGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAA...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGTCTGAGAATCCACTGTaGCCACAGGGTCACTTGCAG +
Preference number: 3 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLSENPL*PQGHLQ
Trigger: CTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGA...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAACCACCAATCCTCCTCTaGGGTGTGGGGAAGAAAGAG +
Preference number: 3 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQPPILL*GVGKKE
Trigger: CTCTTTCTTCCCCACACCCAAGAGGAGGATTGGTGG...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAACCACCAATCCTCCTCTaGGGTGTGGGGAAGAAAGAG +
Preference number: 3 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKPPILL*GVGKKE
Trigger: CTCTTTCTTCCCCACACCCAAGAGGAGGATTGGTGG...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAACCTCCTCATCTGCCTTaGAAGGGGTTTCAGCCTGTC +
Preference number: 3 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQPPHLP*KGFQPV
Trigger: GACAGGCTGAAACCCCTTCAAAGGCAGATGAGGAGG...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTCCACCCCTCCCACCTTaGTTTCCCCACACAATCAAG +
Preference number: 3 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVPPLPP*FPHTIK
Trigger: CTTGATTGTGTGGGGAAACAAAGGTGGGAGGGGTGG...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 72 bp GCTCCTCGGCTAGTCCAGGGAAACTGGGCAGTAGTTTaGTTGTTACTGTTGTTGCTCATCCTGGTATTGGCA +
Preference number: 3 (lower is better)
Translates to: APRLVQGNWAVV*LLLLLLILVLA
Trigger: TGCCAATACCAGGATGAGCAACAACAGTAACAATCAAACTACTGCCCAGTTTCCCTGGACTAGCCGAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 72 bp TACCTTGATCACGGTCTTGGCAAAGATACAGGCACCTaGGTATTCACAGGCCCTGATGAGGAAATCGGAGAT +
Preference number: 3 (lower is better)
Translates to: YLDHGLGKDTGT*VFTGPDEEIGD
Trigger: ATCTCCGATTTCCTCATCAGGGCCTGTGAATACCCAGGTGCCTGTATCTTTGCCAAGACCGTGATCAAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACCACTGGGCACTGGGCTaGAAGCTGCATCCCCCATAC +
Preference number: 3 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHHWALG*KLHPPY
Trigger: GTATGGGGGATGCAGCTTCAAGCCCAGTGCCCAGTG...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCTGAGAATCCACTGTaGCCACAGGGTCACTTGCAG +
Preference number: 3 (lower is better)
Translates to: FHLKPGSHHHALLISLFSSENPL*PQGHLQ
Trigger: CTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGA...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAATCTGAGAATCCACTGTaGCCACAGGGTCACTTGCAG +
Preference number: 3 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKSENPL*PQGHLQ
Trigger: CTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGA...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGACCTTGATCACGGTCTaGGCAAAGATACAGGCACCT +
Preference number: 3 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLTLITV*AKIQAP
Trigger: AGGTGCCTGTATCTTTGCCAAGACCGTGATCAAGGT...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGGAAGCAGAAGGAAGGTaGTGCAGTGCAAGGTTGACA +
Preference number: 3 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLEAEGR*CSARLT
Trigger: TGTCAACCTTGCACTGCACAACCTTCCTTCTGCTTC...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGAAGAGGATACCTTCTaGCCTGGGGAGACCAGCTGG +
Preference number: 3 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMREEDTF*PGETSW
Trigger: CCAGCTGGTCTCCCCAGGCAAGAAGGTATCCTCTTC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAAGGAGGTCTGGTCTGTaGGTGAACAACTGTGTGGAG +
Preference number: 3 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQRRSGL*VNNCVE
Trigger: CTCCACACAGTTGTTCACCAACAGACCAGACCTCCT...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 72 bp CAGTGTTTTCTCCTGACCATCTCTCTTAAGCTACCTTaGTCACGGTCTTGGCAAAGATACAGGCACCTGGGT +
Preference number: 3 (lower is better)
Translates to: QCFLLTISLKLP*SRSWQRYRHLG
Trigger: ACCCAGGTGCCTGTATCTTTGCCAAGACCGTGATCAAGGTAGCTTAAGAGAGATGGTCAGGAGAAAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCAAACTGGGCAGTAGTTaGATTGTTACTGTTGTTGCT +
Preference number: 3 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVKLGSS*IVTVVA
Trigger: AGCAACAACAGTAACAATCAAACTACTGCCCAGTTT...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAACCTTGATCACGGTCTaGGCAAAGATACAGGCACCT +
Preference number: 3 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQTLITV*AKIQAP
Trigger: AGGTGCCTGTATCTTTGCCAAGACCGTGATCAAGGT...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCGAAGCAGAAGGAAGGTaGTGCAGTGCAAGGTTGACA +
Preference number: 3 (lower is better)
Translates to: FHLKPGSHHHALLISLFSEAEGR*CSARLT
Trigger: TGTCAACCTTGCACTGCACAACCTTCCTTCTGCTTC...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGTGTGTTTTCTTTTTCTaGTCCCAGAGGCTATACAGA +
Preference number: 3 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWCVFFF*SQRLYR
Trigger: TCTGTATAGCCTCTGGGACAAGAAAAAGAAAACACA...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTGAATGCACCAAGCGATaGGCTCTGGCCATTTCAAAT +
Preference number: 3 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVECTKR*ALAISN
Trigger: ATTTGAAATGGCCAGAGCCAATCGCTTGGTGCATTC...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAGAATGCACCAAGCGATaGGCTCTGGCCATTTCAAAT +
Preference number: 3 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQECTKR*ALAISN
Trigger: ATTTGAAATGGCCAGAGCCAATCGCTTGGTGCATTC...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCACTATTGGGCAATATTTaGAGACAGCTCGAAACCCAT +
Preference number: 3 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPLLGNI*RQLETH
Trigger: ATGGGTTTCGAGCTGTCTCAAAATATTGCCCAATAG...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 72 bp TTTGAGACAGCTCGAAACCCATGCCTTTTAAATGTCTaGCCTGTGTGTTTTTCAGGGCTGACAGCCCTCTAC +
Preference number: 3 (lower is better)
Translates to: FETARNPCLLNV*PVCFSGLTALY
Trigger: GTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAGACATTTAAAAGGCATGGGTTTCGAGCTGTCTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 72 bp CAAAAGGTCACGTGTCTGTACCTCCTCATCTGCCTTTaGAGGGGTTTCAGCCTGTCTTTAAGAAAGGTTTCC +
Preference number: 3 (lower is better)
Translates to: QKVTCLYLLICL*RGFSLSLRKVS
Trigger: GGAAACCTTTCTTAAAGACAGGCTGAAACCCCTTCAAAGGCAGATGAGGAGGTACAGACACGTGACCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 72 bp TCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTaGTCTGTTGGTGAACAACTGTGTGGAGGAAGACCA +
Preference number: 3 (lower is better)
Translates to: SDTMLTLWLKEV*SVGEQLCGGRP
Trigger: TGGTCTTCCTCCACACAGTTGTTCACCAACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGTTGCTCATCCTGGTATaGGCAGATACGTTAAATACC +
Preference number: 3 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLLLILV*ADTLNT
Trigger: GGTATTTAACGTATCTGCCAATACCAGGATGAGCAA...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 72 bp CAAATTGCACACCAAGTTAAAGGATGTTCTCAGCAGTaGAATACACACACGTGCAGCAAGGCATGCTGGTCT +
Preference number: 3 (lower is better)
Translates to: QIAHQVKGCSQQ*NTHTCSKACWS
Trigger: AGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACTGCTGAGAACATCCTTTAACTTGGTGTGCAATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 72 bp GATGAGGAAATCGGAGATGGAAACCATTACGCAGAATaGACCAAGCGATTGGCTCTGGCCATTTCAAATCTT +
Preference number: 3 (lower is better)
Translates to: DEEIGDGNHYAE*TKRLALAISNL
Trigger: AAGATTTGAAATGGCCAGAGCCAATCGCTTGGTGCATTCTGCGTAATGGTTTCCATCTCCGATTTCCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTTTGCTCATCCTGGTATaGGCAGATACGTTAAATACC +
Preference number: 3 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLLLILV*ADTLNT
Trigger: GGTATTTAACGTATCTGCCAATACCAGGATGAGCAA...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 72 bp AATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTaGAATGTGCTGAGACTTTGTCTCTCTTTTCGTTTT +
Preference number: 3 (lower is better)
Translates to: NGDTFSSVSTTP*NVLRLCLSFRF
Trigger: AAAACGAAAAGAGAGACAAAGTCTCAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 72 bp AGAAATGGCTCTCTTTCCGATACTATGTTGACACTGTaGTTAAAGGAGGTCTGGTCTGTTGGTGAACAACTG +
Preference number: 3 (lower is better)
Translates to: RNGSLSDTMLTL*LKEVWSVGEQL
Trigger: CAGTTGTTCACCAACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCCATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTTGTGTTTTCTTTTTCTaGTCCCAGAGGCTATACAGA +
Preference number: 3 (lower is better)
Translates to: NLQWGHLQLCFYHSLECACVFFF*SQRLYR
Trigger: TCTGTATAGCCTCTGGGACAAGAAAAAGAAAACACA...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 72 bp TTCCTTCAACTGAACCTAGATTGGAGAGCAAAACCCTaGGCACCAATAAACATTCAACAGCTTCCACTTTGT +
Preference number: 3 (lower is better)
Translates to: FLQLNLDWRAKP*APINIQQLPLC
Trigger: ACAAAGTGGAAGCTGTTGAATGTTTATTGGTGCCCAGGGTTTTGCTCTCCAATCTAGGTTCAGTTGAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTATTTATAAGTCACCTTaGTCTGGAACCAATGGGAAA +
Preference number: 3 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLIYKSP*SGTNGK
Trigger: TTTCCCATTGGTTCCAGACAAAGGTGACTTATAAAT...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR GCA 72 bp TTGGGGATTAGTGATAATCAATTCCCACTGAAATCATaGAGAGATGGTAAGTGGGGTTTACCTTCTCTGGAA +
Preference number: 3 (lower is better)
Translates to: LGISDNQFPLKS*RDGKWGLPSLE
Trigger: TTCCAGAGAAGGTAAACCCCACTTACCATCTCTGCATGATTTCAGTGGGAATTGATTATCACTAATCCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR-3UTR CAA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTAAACTGGGCAGTAGTTaGATTGTTACTGTTGTTGCT +
Preference number: 3 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVKLGSS*IVTVVA
Trigger: AGCAACAACAGTAACAATCAAACTACTGCCCAGTTT...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CCA 72 bp GTCTTAGAAACAATATTCCTTCAACTGAACCTAGATTaGAGAGCAAAACCCTGGGCACCAATAAACATTCAA +
Preference number: 3 (lower is better)
Translates to: VLETIFLQLNLD*RAKPWAPINIQ
Trigger: TTGAATGTTTATTGGTGCCCAGGGTTTTGCTCTCCAATCTAGGTTCAGTTGAAGGAATATTGTTTCTAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR TCA 72 bp GCAGAGATGGTAAGTGGGGTTTACCTTCTCTGGAAATaGACTTTTAACTTACCTGATTATTTCTTCTACAAC +
Preference number: 3 (lower is better)
Translates to: AEMVSGVYLLWK*TFNLPDYFFYN
Trigger: GTTGTAGAAGAAATAATCAGGTAAGTTAAAAGTTCATTTCCAGAGAAGGTAAACCCCACTTACCATCTCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCGAAGACCAGGGAGGCTaGACCCTAAGCCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCEDQGG*TLSLRA
Trigger: AGCCCGGAGGCTTAGGGTGCAGCCTCCCTGGTCTTC...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 72 bp GTGGCACAGGTACCCTTGCACCTGAAGCCCACTAGCTaGGCAGCTCACACAGCTGCCTTCCGAGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: VAQVPLHLKPTS*AAHTAAFRVTG
Trigger: CCCAGTCACTCGGAAGGCAGCTGTGTGAGCTGCCAAGCTAGTGGGCTTCAGGTGCAAGGGTACCTGTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTGTGACTGGGTTTGCCTaGCCCTTGCTGAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGVTGFA*PLLRSS
Trigger: GCTGGACCTCAGCAAGGGTCAGGCAAACCCAGTCAC...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTACTGGGCACTGGGCTTaGAGCTGCATCCCCCATACC +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTTGHWA*SCIPHT
Trigger: GGTATGGGGGATGCAGCTTCAAGCCCAGTGCCCAGT...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTTGCCACAGGGTCACTTaGAGCAAAGGCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTCHRVT*SKGLGL
Trigger: CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCA...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTCCGAGTGACTGGGTTTaGCTGACCCTTGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGPSDWV*LTLAEV
Trigger: GACCTCAGCAAGGGTCAGGCAAACCCAGTCACTCGG...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCGGCCTGTCCCATCATTaGAGTGCACTGGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCGLSHH*SALAIP
Trigger: AGGGATGGCCAGTGCACTCCAATGATGGGACAGGCC...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGTTGTCTGGGCTGGCCTaGGTGGTCACCGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLLSGLA*VVTALR
Trigger: TCTCAAAGCGGTGACCACTCAGGCCAGCCCAGACAA...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTCCATCCTCTTCGTTCTaGCAGGCCTCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGPSSSF*QASPQR
Trigger: TCTCTGTGGAGAGGCCTGGCAGAACGAAGAGGATGG...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTGCTGCTCTGGCCAGGTaGTTGGCATTCCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGAALAR*LAFLQL
Trigger: TAACTGCAGGAATGCCAAGCACCTGGCCAGAGCAGC...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTGGCAGCTCACACAGCTaGCTTCCGAGTGACTGGGTT +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTGSSHS*LPSDWV
Trigger: AACCCAGTCACTCGGAAGGCAGCTGTGTGAGCTGCC...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCCCTAAGCCTCCGGGCTaGACTAATCTGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCPKPPG*TNLGWT
Trigger: AGTCCAACCCAGATTAGTGCAGCCCGGAGGCTTAGG...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGTGCTGTCCGCCAGGCTaGAGCAGCCCAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWCCPPG*SSPATE
Trigger: CTCTGTGGCTGGGCTGCTCCAGCCTGGCGGACAGCA...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370187.8
ENST00000393441.8
CDS-3UTR CCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTTGCCTTCCGAGTGACTaGGTTTGCCTGACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGCLPSD*VCLTLA
Trigger: AGCAAGGGTCAGGCAAACCCAGTCACTCGGAAGGCA...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTCCGGGGCCGCCCCTTTaGTGCCAGGCCGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSPGPPL*CQAAAN
Trigger: GTTGGCTGCGGCCTGGCACCAAAGGGGCGGCCCCGG...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393441.8
ENST00000408038.6
3UTR CAA 72 bp TCTGTGTGCTCCCAGGTTGGTGTGGCACAGGTACCCTaGCACCTGAAGCCCACTAGCTTGGCAGCTCACACA +
Preference number: 4 (lower is better)
Translates to: SVCSQVGVAQVP*HLKPTSLAAHT
Trigger: TGTGTGAGCTGCCAAGCTAGTGGGCTTCAGGTGCAAGGGTACCTGTGCCACACCAACCTGGGAGCACACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTCTGATCTGGCTCATGTaGGAGGAGGACACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGLIWLM*EEDTLF
Trigger: GAAGAGAGTGTCCTCCTCTCACATGAGCCAGATCAG...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCCTCCTCATCTGCCTTTaGAGGGGTTTCAGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCLLICL*RGFSLS
Trigger: AGACAGGCTGAAACCCCTTCAAAGGCAGATGAGGAG...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCGGTCTGGTCTGTTGGTaGACAACTGTGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCGLVCW*TTVWRK
Trigger: CTTCCTCCACACAGTTGTTCACCAACAGACCAGACC...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCGCTTCTTCCACAGCATaGCATCAGAGGTCACTCGGT +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCASSTA*HQRSLG
Trigger: ACCGAGTGACCTCTGATGGCATGCTGTGGAAGAAGC...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTGCTTCTTCCACAGCATaGCATCAGAGGTCACTCGGT +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGASSTA*HQRSLG
Trigger: ACCGAGTGACCTCTGATGGCATGCTGTGGAAGAAGC...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCTGGGTTGGACTGCTCTaGTACAGACTGGAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCWVGLL*YRLEGV
Trigger: AACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCA...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGCCTAAGCCTCCGGGCTaGACTAATCTGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLPKPPG*TNLGWT
Trigger: AGTCCAACCCAGATTAGTGCAGCCCGGAGGCTTAGG...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCGGGCCGCCCCTTTGGTaGCAGGCCGCAGCCAACGCA +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSGPPLW*QAAANA
Trigger: TGCGTTGGCTGCGGCCTGGCACCAAAGGGGCGGCCC...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCTTAACAGGGAGACACTaGGCACTGGGCTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCLTGRH*ALGLKL
Trigger: CAGCTTCAAGCCCAGTGCCCAGTGTCTCCCTGTTAA...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCGCTCCCAGGTTGGTGTaGCACAGGTACCCTTGCACC +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVAPRLV*HRYPCT
Trigger: GGTGCAAGGGTACCTGTGCCACACCAACCTGGGAGC...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTTGTGTTTTTCAGGGCTaGCAGCCCTCTACCTTCATC +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGCVFQG*QPSTFI
Trigger: GATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACA...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGGGTCTGGTCTGTTGGTaGACAACTGTGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLGLVCW*TTVWRK
Trigger: CTTCCTCCACACAGTTGTTCACCAACAGACCAGACC...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTGCATTAAGTTCCACCTaGAACCAGGCAGCCATCATC +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGALSST*NQAAII
Trigger: GATGATGGCTGCCTGGTTTCAGGTGGAACTTAATGC...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCATGTCTGGAAAGCTGTaGGTGCGCCAGTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVMSGKL*VRQSLG
Trigger: ACCCAGGGACTGGCGCACTCACAGCTTTCCAGACAT...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393441.8
CDS-3UTR GCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTCTGGAAAGCTGTGAGTaGGCCAGTCCCTGGGTTATA +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTLESCE*ASPWVI
Trigger: TATAACCCAGGGACTGGCGCACTCACAGCTTTCCAG...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370187.8
ENST00000393441.8
CDS-3UTR GCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCCTCGGTACCATTCCTTaGACACAAGTTCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCLGTIP*TQVQQH
Trigger: GTGCTGCTGAACTTGTGTGCAAGGAATGGTACCGAG...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCCTGAGTAGACCGTCCTaGGCCGACTGCAGACCAACT +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVLSRPS*ADCRPT
Trigger: AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAG...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGGGGGCTGGGCTGCTCTaGCCAGGTGCTTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLGAGLL*PGAWHS
Trigger: GGAATGCCAAGCACCTGGCCAGAGCAGCCCAGCCCC...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTTGCAGCAAGGCATGCTaGTCTTGTCCAAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTCSKAC*SCPSSS
Trigger: GGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGTGCAGCAAGGCATGCTaGTCTTGTCCAAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLCSKAC*SCPSSS
Trigger: GGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCTGCTCTGCTACAGACTaGAGGGTGTTGCCATCTAAG +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCCSATD*RVLPSK
Trigger: CTTAGATGGCAACACCCTCCAGTCTGTAGCAGAGCA...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 72 bp GCTATACAGAGGGAACTCTGTCTCCTCCTAAGCATATaGGGGCTGGGCTGCTCTGGCCAGGTGCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: AIQRELCLLLSI*GLGCSGQVLGI
Trigger: AATGCCAAGCACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTCTGTATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTATGTTCTCAGCAATATaGTCCAATCCCCGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTMFSAI*SNPRAG
Trigger: GCCAGCTCGGGGATTGGATCATATTGCTGAGAACAT...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTTTACATCCCACACTCTaGCCGTGGAATCCGATGATC +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTLHPTL*PWNPMI
Trigger: GATCATCGGATTCCACGGTCAGAGTGTGGGATGTAA...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGTGCCAAACTTCACCCTaGTCCTCTCTCTTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLCQTSP*SSLLSS
Trigger: GCTGCTTAAGAGAGAGGATCAGGGTGAAGTTTGGCA...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGACTGGGTTTGCCTaGCCCTTGCTGAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPVTGFA*PLLRSS
Trigger: GCTGGACCTCAGCAAGGGTCAGGCAAACCCAGTCAC...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCAGTCAACACAATAGATaGCGAACCCTGATAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCSQHNR*RTLIVA
Trigger: GGCCACTATCAGGGTTCGTCATCTATTGTGTTGACT...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGGAGTCTCAAAGCCCTaGTCCTCGGCTAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPGVSKP*SSASPG
Trigger: CCCTGGACTAGCCGAGGAGCAGGGCTTTGAGACTCC...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGAGGAAGGTTGTGCAGTaGAAGGTTGACACGGTGAGA +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLRKVVQ*KVDTVR
Trigger: TCTCACCGTGTCAACCTTGCACTGCACAACCTTCCT...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTGAAGACCAGGGAGGCTaGACCCTAAGCCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: DTFLPGETSWVHINSILCEDQGG*TLSLRA
Trigger: AGCCCGGAGGCTTAGGGTGCAGCCTCCCTGGTCTTC...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTGCTGTCCGCCAGGCTaGAGCAGCCCAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSCCPPG*SSPATE
Trigger: CTCTGTGGCTGGGCTGCTCCAGCCTGGCGGACAGCA...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370187.8
ENST00000393441.8
CDS-3UTR CCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTGGGGCTGGGCTGCTCTaGCCAGGTGCTTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSGAGLL*PGAWHS
Trigger: GGAATGCCAAGCACCTGGCCAGAGCAGCCCAGCCCC...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCTGTGTGCTCCCAGGTTaGTGTGGCACAGGTACCCTT +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVCVLPG*CGTGTL
Trigger: AAGGGTACCTGTGCCACACCAACCTGGGAGCACACA...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTGAGCGCCAGCTGTGCTaGTTGGAAAGCACATATTTT +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGERQLC*LESTYF
Trigger: AAAATATGTGCTTTCCAACCAGCACAGCTGGCGCTC...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACCCGGGGCCGCCCCTTTaGTGCCAGGCCGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHPGPPL*CQAAAN
Trigger: GTTGGCTGCGGCCTGGCACCAAAGGGGCGGCCCCGG...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393441.8
ENST00000408038.6
3UTR CAA 72 bp GAACCAGCTGAAAGCTCTCGGGGAAGCTTACATGTGTaGTTAGGCCTGTCCCATCATTGGAGTGCACTGGCC +
Preference number: 4 (lower is better)
Translates to: EPAESSRGSLHV*LGLSHHWSALA
Trigger: GGCCAGTGCACTCCAATGATGGGACAGGCCTAACAACACATGTAAGCTTCCCCGAGAGCTTTCAGCTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTTTAGGAAGTCCCAGATaGGGATTGTGTCATCATGTG +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGLGSPR*GLCHHV
Trigger: CACATGATGACACAATCCTCATCTGGGACTTCCTAA...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGAGCAGTCAGTTGTGCTaGGTAGACCGTCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLSSQLC*VDRPGP
Trigger: CGGCCCAGGACGGTCTACTCAGCACAACTGACTGCT...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCACTGGGCACTGGGCTTaGAGCTGCATCCCCCATACC +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAATGHWA*SCIPHT
Trigger: GGTATGGGGGATGCAGCTTCAAGCCCAGTGCCCAGT...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCCTGATCTGGCTCATGTaGGAGGAGGACACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVLIWLM*EEDTLF
Trigger: GAAGAGAGTGTCCTCCTCTCACATGAGCCAGATCAG...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTAAAAGATGCAGCCATTaGTGGAGCCCAGGAAACTTC +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTKRCSH*WSPGNF
Trigger: GAAGTTTCCTGGGCTCCATCAATGGCTGCATCTTTT...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTGCAAAAGGGAGATGCTaGGAAGGTCAACAGTACCAA +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTAKGRC*EGQQYQ
Trigger: TTGGTACTGTTGACCTTCTCAGCATCTCCCTTTTGC...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTTTGAGTGCCTTCTCTTaGAGCACCGCCTCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSLSAFS*STASAG
Trigger: CCCGGCCGAGGCGGTGCTGCAAGAGAAGGCACTCAA...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTGGAGTCTCAAAGCCCTaGTCCTCGGCTAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DTFLPGETSWVHINSILCGVSKP*SSASPG
Trigger: CCCTGGACTAGCCGAGGAGCAGGGCTTTGAGACTCC...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGAGTGCGCCAGTCCCTaGGTTATACAGGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPECASP*VIQASQ
Trigger: CTGCGATGCCTGTATAACCCAGGGACTGGCGCACTC...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370187.8
ENST00000393441.8
CDS-3UTR CCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCAGAGTTTCCGTTGCTTaGGCACAATCATACTGGAAG +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCRVSVA*AQSYWK
Trigger: CTTCCAGTATGATTGTGCCCAAGCAACGGAAACTCT...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCTTAACAGGGAGACACTaGGCACTGGGCTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVLTGRH*ALGLKL
Trigger: CAGCTTCAAGCCCAGTGCCCAGTGTCTCCCTGTTAA...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCCCACAGACGCTTTATTaGCTGGGGAGAGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVPQTLY*LGRVKS
Trigger: GCTCTTCACTCTCCCCAGCCAATAAAGCGTCTGTGG...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTCCTGGGGAGACCAGCTaGGTGCACATTAATAGTATT +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTPGETS*VHINSI
Trigger: AATACTATTAATGTGCACCCAGCTGGTCTCCCCAGG...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTGAGACTAATCTACAATaGGGACACCTTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGETNLQ*GHLQLC
Trigger: ACAGAGCTGAAGGTGTCCCCATTGTAGATTAGTCTC...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGTCCCTCAGATTTGTCTaGGCTGGCCTGAGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWSLRFV*AGLSGH
Trigger: GTGACCACTCAGGCCAGCCCAGACAAATCTGAGGGA...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 72 bp GGGAAGCTTACATGTGTTGTTAGGCCTGTCCCATCATaGGAGTGCACTGGCCATCCCTCAGATTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GKLTCVVRPVPS*ECTGHPSDLSG
Trigger: CCCAGACAAATCTGAGGGATGGCCAGTGCACTCCAATGATGGGACAGGCCTAACAACACATGTAAGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTTTAGGAAGTCCCAGATaGGGATTGTGTCATCATGTG +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTLGSPR*GLCHHV
Trigger: CACATGATGACACAATCCTCATCTGGGACTTCCTAA...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTTGTGCAGTGCAAGGTTaGCACGGTGAGATCAATATT +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTCAVQG*HGEINI
Trigger: AATATTGATCTCACCGTGTCAACCTTGCACTGCACA...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGAGGTACCCTTGCACCTaGAGCCCACTAGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLRYPCT*SPLAWQ
Trigger: CTGCCAAGCTAGTGGGCTTCAGGTGCAAGGGTACCT...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCAGGTACCCTTGCACCTaGAGCCCACTAGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAARYPCT*SPLAWQ
Trigger: CTGCCAAGCTAGTGGGCTTCAGGTGCAAGGGTACCT...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCTGCCTTTTAAATGTCTaGCCTGTGTGTTTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCCLLNV*PVCFSG
Trigger: CCCTGAAAAACACACAGGTCAGACATTTAAAAGGCA...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCTATTGGGCAATATTTTaGGACAGCTCGAAACCCATG +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCYWAIF*DSSKPM
Trigger: CATGGGTTTCGAGCTGTCTCAAAATATTGCCCAATA...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTCAACAAACTGGTAAATaGCCCCCAGAGCTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTQQTGK*PPELRN
Trigger: ATTTCTCAGCTCTGGGGGTCATTTACCAGTTTGTTG...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGCTCCTTGGAATGTGCTaGGACTTTGTCTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLLLGMC*DFVSLF
Trigger: GAAAAGAGAGACAAAGTCTCAGCACATTCCAAGGAG...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCACGCAAGTGCAGAACTaGTTCACAATGGTGAATCAA +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCTQVQN*FTMVNQ
Trigger: TTGATTCACCATTGTGAAGCAGTTCTGCACTTGCGT...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTACTGCAAACAGGCAATaGCTCGTTTGTGTCCATTTA +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGTANRQ*LVCVHL
Trigger: TAAATGGACACAAACGAGGCATTGCCTGTTTGCAGT...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTCCGTCCTGGGCCGACTaGAGACCAACTGTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAPSWAD*RPTVSQ
Trigger: TTGGGACACAGTTGGTCTGCAGTCGGCCCAGGACGG...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTATATTGGGGCTGGGCTaGTCTGGCCAGGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSILGLG*SGQVLG
Trigger: GCCAAGCACCTGGCCAGAGCAGCCCAGCCCCAATAT...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTATATTGGGGCTGGGCTaGTCTGGCCAGGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAILGLG*SGQVLG
Trigger: GCCAAGCACCTGGCCAGAGCAGCCCAGCCCCAATAT...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAATGCCACAGGGTCACTTaGAGCAAAGGCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKCHRVT*SKGLGL
Trigger: CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCA...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTGGGAGACCAGCTGGGTaGACATTAATAGTATTCTGT +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTGRPAG*TLIVFC
Trigger: ACAGAATACTATTAATGTGCACCCAGCTGGTCTCCC...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGTTCCCACTGAAATCATaGAGAGATGGTAAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLFPLKS*RDGKWG
Trigger: ACCCCACTTACCATCTCTGCATGATTTCAGTGGGAA...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCGAGTGCGCCAGTCCCTaGGTTATACAGGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAAECASP*VIQASQ
Trigger: CTGCGATGCCTGTATAACCCAGGGACTGGCGCACTC...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370187.8
ENST00000393441.8
CDS-3UTR CCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCCAGCACATAGTGATTTaGCATCCAGGTATGACAGAA +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCQHIVI*HPGMTE
Trigger: TTCTGTCATACCTGGATGCCAAATCACTATGTGCTG...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGCTCTATAAAAAGAGTTaGGAGGAGCATTCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLLYKKS*EEHSRQ
Trigger: CTGACGGGAATGCTCCTCCCAACTCTTTTTATAGAG...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGTATCCCATACAGCAATaGAACGATCTTTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLYPIQQ*NDLWSR
Trigger: CCTGCTCCAAAGATCGTTCCATTGCTGTATGGGATA...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTAATGCACCAAGCGATTaGCTCTGGCCATTTCAAATC +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTNAPSD*LWPFQI
Trigger: GATTTGAAATGGCCAGAGCCAATCGCTTGGTGCATT...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCCAGGAGGTTTGTTTTTaGATAAATACTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCQEVCF*INTVPI
Trigger: GATGGGGACAGTATTTATTCAAAAACAAACCTCCTG...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGGATAGTGTTGTCAGATaGGCCACTCACTACCAGCCT +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWDSVVR*ATHYQP
Trigger: AGGCTGGTAGTGAGTGGCTCATCTGACAACACTATC...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTAGGTACCCTTGCACCTaGAGCCCACTAGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSRYPCT*SPLAWQ
Trigger: CTGCCAAGCTAGTGGGCTTCAGGTGCAAGGGTACCT...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGCCCCGATCTCCTTTGTaGTGTACTGGACATGTCTCA +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWPRSPL*CTGHVS
Trigger: TGAGACATGTCCAGTACATCACAAAGGAGATCGGGG...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCTTCGGAAACAAGTTATaGGGGCCAGACTTTTATTAC +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCFGNKL*GPDFYY
Trigger: GTAATAAAAGTCTGGCCCTCATAACTTGTTTCCGAA...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGGCATTAAGTTCCACCTaGAACCAGGCAGCCATCATC +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWALSST*NQAAII
Trigger: GATGATGGCTGCCTGGTTTCAGGTGGAACTTAATGC...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTTTGTCTGGGCTGGCCTaGGTGGTCACCGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECALSGLA*VVTALR
Trigger: TCTCAAAGCGGTGACCACTCAGGCCAGCCCAGACAA...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGTTGAGTGCCTTCTCTTaGAGCACCGCCTCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRLSAFS*STASAG
Trigger: CCCGGCCGAGGCGGTGCTGCAAGAGAAGGCACTCAA...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGGCACATAAACTTGAGTaGCTTCTCTTGCAGCACCGC +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWAHKLE*LLLQHR
Trigger: GCGGTGCTGCAAGAGAAGGCACTCAAGTTTATGTGC...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370187.8
ENST00000393441.8
CDS-3UTR GCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTGTTAATGAGAGGAAATaGAATCAGCAACTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGVNERK*NQQLLS
Trigger: GGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAAC...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGAGGAAGGTTGTGCAGTaGAAGGTTGACACGGTGAGA +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWRKVVQ*KVDTVR
Trigger: TCTCACCGTGTCAACCTTGCACTGCACAACCTTCCT...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGCAGACTGGAGGGTGTTaGCATCTAAGGCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWQTGGC*HLRQKG
Trigger: TCCCTTTTGCCTTAGATGGCAACACCCTCCAGTCTG...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGCCTAAGCCTCCGGGCTaGACTAATCTGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLPKPPG*TNLGWT
Trigger: AGTCCAACCCAGATTAGTGCAGCCCGGAGGCTTAGG...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTAGGCAGCCATCATCATaGTCTTTTGATTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGRQPSS*SFDFSL
Trigger: AAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCT...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCTGGCAAGTTTTGTTTTaGCCACACAATTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCWQVLF*PHNSQS
Trigger: AGACTGAGAATTGTGTGGCCAAAACAAAACTTGCCA...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCAGGACTGAACCTGTATaGCCTGTGAGAATTCGCTTG +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVRTEPV*PVRIRL
Trigger: CAAGCGAATTCTCACAGGCCATACAGGTTCAGTCCT...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTCTGAGTAGACCGTCCTaGGCCGACTGCAGACCAACT +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECALSRPS*ADCRPT
Trigger: AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAG...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGTGTGTGCTCCCAGGTTaGTGTGGCACAGGTACCCTT +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLCVLPG*CGTGTL
Trigger: AAGGGTACCTGTGCCACACCAACCTGGGAGCACACA...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTGGATACCTTCTTGCCTaGGGAGACCAGCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVGYLLA*GDQLGA
Trigger: TGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATCC...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCAGCTGTTCAGACCAATaGTACCAGGAGCCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAASCSDQ*YQEPAR
Trigger: CCTTGCCGGCTCCTGGTACCATTGGTCTGAACAGCT...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGACTATGTTGACACTGTaGTTAAAGGAGGTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLTMLTL*LKEVWS
Trigger: AGACCAGACCTCCTTTAACCACAGTGTCAACATAGT...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGCAGATTTGTCTGGGCTaGCCTGAGTGGTCACCGCTT +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLQICLG*PEWSPL
Trigger: AAGCGGTGACCACTCAGGCCAGCCCAGACAAATCTG...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCATCATTGGAGTGCACTaGCCATCCCTCAGATTTGTC +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVIIGVH*PSLRFV
Trigger: GACAAATCTGAGGGATGGCCAGTGCACTCCAATGAT...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAGGCCTGTCCCATCATTaGAGTGCACTGGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQGLSHH*SALAIP
Trigger: AGGGATGGCCAGTGCACTCCAATGATGGGACAGGCC...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 72 bp CATTCAGTGGGTACACCTTGGGAAGAGGATACCTTCTaGCCTGGGGAGACCAGCTGGGTGCACATTAATAGT +
Preference number: 4 (lower is better)
Translates to: HSVGTPWEEDTF*PGETSWVHINS
Trigger: ACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATCCTCTTCCCAAGGTGTACCCACTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGGTTTCACTTCGGCAGTaGATTCTCTGTAAACTATGT +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLVSLRQ*ILCKLC
Trigger: ACATAGTTTACAGAGAATTCACTGCCGAAGTGAAAC...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTCTGGAGACAGAGGACTaGACCTGTATGGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECALETED*TCMACE
Trigger: CTCACAGGCCATACAGGTTCAGTCCTCTGTCTCCAG...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAACTGGAGACAGAGGACTaGACCTGTATGGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKLETED*TCMACE
Trigger: CTCACAGGCCATACAGGTTCAGTCCTCTGTCTCCAG...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTACTGCTTCACAATGGTaGATCAACGTGTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTTASQW*INVFSI
Trigger: AATGCTAAACACGTTGATTCACCATTGTGAAGCAGT...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGAGCAGTCAGTTGTGCTaGGTAGACCGTCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRSSQLC*VDRPGP
Trigger: CGGCCCAGGACGGTCTACTCAGCACAACTGACTGCT...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCCTCCTTGGAATGTGCTaGGACTTTGTCTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVLLGMC*DFVSLF
Trigger: GAAAAGAGAGACAAAGTCTCAGCACATTCCAAGGAG...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGGATGTTCTCAGCAGTaGAATACACACACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPGCSQQ*NTHTCS
Trigger: GCTGCACGTGTGTGTATTTCACTGCTGAGAACATCC...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGCATTAAGTTCCACCTaGAACCAGGCAGCCATCATC +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPALSST*NQAAII
Trigger: GATGATGGCTGCCTGGTTTCAGGTGGAACTTAATGC...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCCTGGAAAGCTGTGAGTaGGCCAGTCCCTGGGTTATA +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAALESCE*ASPWVI
Trigger: TATAACCCAGGGACTGGCGCACTCACAGCTTTCCAG...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370187.8
ENST00000393441.8
CDS-3UTR GCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCCAATCATACTGGAAGTaGCATTGGCAAGTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCQSYWK*HWQVLF
Trigger: AAACAAAACTTGCCAATGGCACTTCCAGTATGATTG...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTCAATCATACTGGAAGTaGCATTGGCAAGTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGQSYWK*HWQVLF
Trigger: AAACAAAACTTGCCAATGGCACTTCCAGTATGATTG...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCATCCTCTTCGTTCTaGCAGGCCTCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLPSSSF*QASPQR
Trigger: TCTCTGTGGAGAGGCCTGGCAGAACGAAGAGGATGG...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTAACAGTAAACTCCTTTaGTTGTTTCACTTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTNSKLL*LFHFGS
Trigger: ACTGCCGAAGTGAAACAAGCAAAGGAGTTTACTGTT...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTGTTAATGAGAGGAAATaGAATCAGCAACTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTVNERK*NQQLLS
Trigger: GGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAAC...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCAGAAAAGGCAGTTTTTaGCCCATTAATAAACCCTGT +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCRKGSF*PINKPC
Trigger: ACAGGGTTTATTAATGGGGCAAAAACTGCCTTTTCT...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTTGGGTTGGACTGCTCTaGTACAGACTGGAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: DTFLPGETSWVHINSILCWVGLL*YRLEGV
Trigger: AACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCA...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTAGGCAGCCATCATCATaGTCTTTTGATTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTRQPSS*SFDFSL
Trigger: AAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCT...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTGTCCCATCATTGGAGTaGACTGGCCATCCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: DTFLPGETSWVHINSILCVPSLE*TGHPSD
Trigger: ATCTGAGGGATGGCCAGTGCACTCCAATGATGGGAC...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGGTCCCATCATTGGAGTaGACTGGCCATCCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLVPSLE*TGHPSD
Trigger: ATCTGAGGGATGGCCAGTGCACTCCAATGATGGGAC...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTGGGCCGCCCCTTTGGTaGCAGGCCGCAGCCAACGCA +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLGPPLW*QAAANA
Trigger: TGCGTTGGCTGCGGCCTGGCACCAAAGGGGCGGCCC...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCACTCTCTGAGGAATTCTaGAAAGCTGTGAGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPLSEEF*KAVSAP
Trigger: TGGCGCACTCACAGCTTTCCAGAATTCCTCAGAGAG...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370187.8
CDS-3UTR CCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCAACTTTAATGGGTCCTaGGCAAGTATGAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVNFNGS*ASMRSV
Trigger: CACTGACCTCATACTTGCCCAGGACCCATTAAAGTT...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCTTAACAGGGAGACACTaGGCACTGGGCTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAALTGRH*ALGLKL
Trigger: CAGCTTCAAGCCCAGTGCCCAGTGTCTCCCTGTTAA...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCCCACAGACGCTTTATTaGCTGGGGAGAGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAAPQTLY*LGRVKS
Trigger: GCTCTTCACTCTCCCCAGCCAATAAAGCGTCTGTGG...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAATGCCTTCCGAGTGACTaGGTTTGCCTGACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQCLPSD*VCLTLA
Trigger: AGCAAGGGTCAGGCAAACCCAGTCACTCGGAAGGCA...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTTGCCTTCCGAGTGACTaGGTTTGCCTGACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVCLPSD*VCLTLA
Trigger: AGCAAGGGTCAGGCAAACCCAGTCACTCGGAAGGCA...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGCCTGGGGAGACCAGCTaGGTGCACATTAATAGTATT +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWPGETS*VHINSI
Trigger: AATACTATTAATGTGCACCCAGCTGGTCTCCCCAGG...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGTCCTTTGTGATGTACTaGACATGTCTCAAAACAGTC +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLSFVMY*TCLKTV
Trigger: GACTGTTTTGAGACATGTCCAGTACATCACAAAGGA...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAAAGCTGTTCAGACCAATaGTACCAGGAGCCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKSCSDQ*YQEPAR
Trigger: CCTTGCCGGCTCCTGGTACCATTGGTCTGAACAGCT...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCGGGCTGCACTAATCTaGGTTGGACTGCTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLRAALI*VGLLCY
Trigger: GTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCG...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAACAGATTTGTCTGGGCTaGCCTGAGTGGTCACCGCTT +
Preference number: 4 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQQICLG*PEWSPL
Trigger: AAGCGGTGACCACTCAGGCCAGCCCAGACAAATCTG...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCAGATTTGTCTGGGCTaGCCTGAGTGGTCACCGCTT +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLQICLG*PEWSPL
Trigger: AAGCGGTGACCACTCAGGCCAGCCCAGACAAATCTG...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTTCCCTCAGATTTGTCTaGGCTGGCCTGAGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSSLRFV*AGLSGH
Trigger: GTGACCACTCAGGCCAGCCCAGACAAATCTGAGGGA...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 72 bp TGCTCCTCGGCTAGTCCAGGGAAACTGGGCAGTAGTTaGATTGTTACTGTTGTTGCTCATCCTGGTATTGGC +
Preference number: 4 (lower is better)
Translates to: CSSASPGKLGSS*IVTVVAHPGIG
Trigger: GCCAATACCAGGATGAGCAACAACAGTAACAATCAAACTACTGCCCAGTTTCCCTGGACTAGCCGAGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCACTTTTCATAGCTTGCTaGGAGTTTCCGTTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPLFIAC*EFPLLG
Trigger: CCCAAGCAACGGAAACTCTCAGCAAGCTATGAAAAG...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCTTTGGCATCCAGGTATaGCAGAATGTTCTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVFGIQV*QNVLSN
Trigger: ATTGCTGAGAACATTCTGTCATACCTGGATGCCAAA...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCTTTTATCCCAGATCTTaGTTGTGTTGTCTCGAAGGC +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVFYPRS*LCCLEG
Trigger: GCCTTCGAGACAACACAATCAAGATCTGGGATAAAA...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGCAAAGTCTACAACATTaGCAGCAGCTCGGTGTCCGA +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLQSLQH*QQLGVR
Trigger: TCGGACACCGAGCTGCTGTCAATGTTGTAGACTTTG...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTCTGATCTGGCTCATGTaGGAGGAGGACACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECALIWLM*EEDTLF
Trigger: GAAGAGAGTGTCCTCCTCTCACATGAGCCAGATCAG...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTGTTGCATTTTCTGGCTaGTCTGGCTCATGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: DTFLPGETSWVHINSILCVAFSG*SGSCER
Trigger: CCTCTCACATGAGCCAGATCAGCCAGAAAATGCAAC...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGTCTCTTAAGCTACCTTaGTCACGGTCTTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWSLKLP*SRSWQR
Trigger: TCTTTGCCAAGACCGTGATCAAGGTAGCTTAAGAGA...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCTGTGTTTTTCAGGGCTaGCAGCCCTCTACCTTCATC +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAACVFQG*QPSTFI
Trigger: GATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACA...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGCTCCTTGGAATGTGCTaGGACTTTGTCTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWLLGMC*DFVSLF
Trigger: GAAAAGAGAGACAAAGTCTCAGCACATTCCAAGGAG...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAACTCCTCATCTGCCTTTaGAGGGGTTTCAGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKLLICL*RGFSLS
Trigger: AGACAGGCTGAAACCCCTTCAAAGGCAGATGAGGAG...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCGGATGTTCTCAGCAGTaGAATACACACACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAAGCSQQ*NTHTCS
Trigger: GCTGCACGTGTGTGTATTTCACTGCTGAGAACATCC...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGCTCGGTACCATTCCTTaGACACAAGTTCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLLGTIP*TQVQQH
Trigger: GTGCTGCTGAACTTGTGTGCAAGGAATGGTACCGAG...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAAGCTTCTTCCACAGCATaGCATCAGAGGTCACTCGGT +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKASSTA*HQRSLG
Trigger: ACCGAGTGACCTCTGATGGCATGCTGTGGAAGAAGC...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCAGGAAGGTTGTGCAGTaGAAGGTTGACACGGTGAGA +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAARKVVQ*KVDTVR
Trigger: TCTCACCGTGTCAACCTTGCACTGCACAACCTTCCT...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTGCAGCTTTGCCCTTCTaGAAATACTGGGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLAALPF*KYWVWE
Trigger: CTCCCACACCCAGTATTTGCAGAAGGGCAAAGCTGC...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGCAAGTAGCTCCAGTGTaGACCAAAAGGTCACGTGTC +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLQVAPV*TKRSRV
Trigger: GACACGTGACCTTTTGGTGCACACTGGAGCTACTTG...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAAACGTGCAGCAAGGCATaGTGGTCTTGTCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKTCSKA*WSCPSS
Trigger: GCTACTTGGACAAGACCAGCATGCCTTGCTGCACGT...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGCACCAGAAAGAATTTTaGCAAGGGACATGTACAAAT +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLHQKEF*QGTCTN
Trigger: ATTTGTACATGTCCCTTGGCAAAATTCTTTCTGGTG...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTGAAGACCAGGGAGGCTaGACCCTAAGCCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVEDQGG*TLSLRA
Trigger: AGCCCGGAGGCTTAGGGTGCAGCCTCCCTGGTCTTC...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGTCCCATCATTGGAGTaGACTGGCCATCCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAVPSLE*TGHPSD
Trigger: ATCTGAGGGATGGCCAGTGCACTCCAATGATGGGAC...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCGAGGGTAATGTCAGTTaGGGAGGCCATATCCCATAC +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAAEGNVS*GGHIPY
Trigger: GTATGGGATATGGCCTCCCCAACTGACATTACCCTC...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCAGGCTGGTAAAATTATaGCTATTGGGCAATATTTTG +
Preference number: 4 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCRLVKL*LLGNIL
Trigger: CAAAATATTGCCCAATAGCCATAATTTTACCAGCCT...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCTGCTCTGCTACAGACTaGAGGGTGTTGCCATCTAAG +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAACSATD*RVLPSK
Trigger: CTTAGATGGCAACACCCTCCAGTCTGTAGCAGAGCA...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGGCCTGTCCCATCATTaGAGTGCACTGGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRGLSHH*SALAIP
Trigger: AGGGATGGCCAGTGCACTCCAATGATGGGACAGGCC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 72 bp AAATATGATGAGAGTATCATGTCTGAGAATCCACTGTaGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KYDESIMSENPL*PQGHLQQRPGA
Trigger: AGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACATGATACTCTCATCATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCATGTTCTCAGCAATATaGTCCAATCCCCGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSMFSAI*SNPRAG
Trigger: GCCAGCTCGGGGATTGGATCATATTGCTGAGAACAT...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGCCGATGATCCTGTTATaGTCACTCTCTCATCATACT +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWPMILL*SLSHHT
Trigger: AGTATGATGAGAGAGTGATCATAACAGGATCATCGG...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTTTACATCCCACACTCTaGCCGTGGAATCCGATGATC +
Preference number: 4 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVLHPTL*PWNPMI
Trigger: GATCATCGGATTCCACGGTCAGAGTGTGGGATGTAA...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAATTACATCCCACACTCTaGCCGTGGAATCCGATGATC +
Preference number: 4 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQLHPTL*PWNPMI
Trigger: GATCATCGGATTCCACGGTCAGAGTGTGGGATGTAA...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCACTGCTTCACAATGGTaGATCAACGTGTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVTASQW*INVFSI
Trigger: AATGCTAAACACGTTGATTCACCATTGTGAAGCAGT...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTCAAAGTCTACAACATTaGCAGCAGCTCGGTGTCCGA +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAQSLQH*QQLGVR
Trigger: TCGGACACCGAGCTGCTGTCAATGTTGTAGACTTTG...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTAGCAGTCAGTTGTGCTaGGTAGACCGTCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVSSQLC*VDRPGP
Trigger: CGGCCCAGGACGGTCTACTCAGCACAACTGACTGCT...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTACTGGGCACTGGGCTTaGAGCTGCATCCCCCATACC +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVTGHWA*SCIPHT
Trigger: GGTATGGGGGATGCAGCTTCAAGCCCAGTGCCCAGT...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCGTTGCATTTTCTGGCTaGTCTGGCTCATGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSVAFSG*SGSCER
Trigger: CCTCTCACATGAGCCAGATCAGCCAGAAAATGCAAC...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTTGCCAAACTTCACCCTaGTCCTCTCTCTTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVCQTSP*SSLLSS
Trigger: GCTGCTTAAGAGAGAGGATCAGGGTGAAGTTTGGCA...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTTGCCAAACTTCACCCTaGTCCTCTCTCTTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECACQTSP*SSLLSS
Trigger: GCTGCTTAAGAGAGAGGATCAGGGTGAAGTTTGGCA...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAATGTGTTTTTCAGGGCTaGCAGCCCTCTACCTTCATC +
Preference number: 4 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQCVFQG*QPSTFI
Trigger: GATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACA...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCCCCCGATCTCCTTTGTaGTGTACTGGACATGTCTCA +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSPRSPL*CTGHVS
Trigger: TGAGACATGTCCAGTACATCACAAAGGAGATCGGGG...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAGGATGTTCTCAGCAGTaGAATACACACACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQGCSQQ*NTHTCS
Trigger: GCTGCACGTGTGTGTATTTCACTGCTGAGAACATCC...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCATCATCATGCTCTTTTaGTTTCTCTCTTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVIIMLF*FLSSAP
Trigger: TGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGAT...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACTTGTCTGGGCTGGCCTaGGTGGTCACCGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHLSGLA*VVTALR
Trigger: TCTCAAAGCGGTGACCACTCAGGCCAGCCCAGACAA...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCGCTGAGAGTTTCCGTTaGTTGGGCACAATCATACTG +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAAAESFR*LGTIIL
Trigger: CAGTATGATTGTGCCCAAGCAACGGAAACTCTCAGC...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAAGCACATAAACTTGAGTaGCTTCTCTTGCAGCACCGC +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKAHKLE*LLLQHR
Trigger: GCGGTGCTGCAAGAGAAGGCACTCAAGTTTATGTGC...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370187.8
ENST00000393441.8
CDS-3UTR GCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGGATTGTTACTGTTGTTaGTCATCCTGGTATTGGCAG +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWDCYCC*SSWYWQ
Trigger: CTGCCAATACCAGGATGAGCAACAACAGTAACAATC...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTAACCATTACGCAGAATaGACCAAGCGATTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DTFLPGETSWVHINSILCNHYAE*TKRLAL
Trigger: CAGAGCCAATCGCTTGGTGCATTCTGCGTAATGGTT...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGAGGTCCAGCTGTTTATaGTGTTCACCAATCGCCACA +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLRSSCL*CSPIAT
Trigger: TGTGGCGATTGGTGAACAGCATAAACAGCTGGACCT...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGAAGAGGATACCTTCTTaGCTGGGGAGACCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRKRIPS*LGRPAG
Trigger: CCCAGCTGGTCTCCCCAGGCAAGAAGGTATCCTCTT...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAACAGACTGGAGGGTGTTaGCATCTAAGGCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKQTGGC*HLRQKG
Trigger: TCCCTTTTGCCTTAGATGGCAACACCCTCCAGTCTG...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCAGGCAGCCATCATCATaGTCTTTTGATTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVRQPSS*SFDFSL
Trigger: AAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCT...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGATTTTAGATGTCATCTaGCTCCAGGACATTTTAGAT +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLILDVI*LQDILD
Trigger: ATCTAAAATGTCCTGGAGGCAGATGACATCTAAAAT...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAATTCATAAACTTGAGTaGCTTCTCTTGCAGCACCGC +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPIHKLE*LLLQHR
Trigger: GCGGTGCTGCAAGAGAAGGCACTCAAGTTTATGAAT...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408038.6
CDS-3UTR CCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCTGGCAAGTTTTGTTTTaGCCACACAATTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVWQVLF*PHNSQS
Trigger: AGACTGAGAATTGTGTGGCCAAAACAAAACTTGCCA...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGATCCAATCCCCGAGCTaGCAGAGCAGTTATGAAATC +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLIQSPS*QSSYEI
Trigger: GATTTCATAACTGCTCTGCCAGCTCGGGGATTGGAT...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAAGAGGGTAATGTCAGTTaGGGAGGCCATATCCCATAC +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKEGNVS*GGHIPY
Trigger: GTATGGGATATGGCCTCCCCAACTGACATTACCCTC...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGAGGGTAATGTCAGTTaGGGAGGCCATATCCCATAC +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAEGNVS*GGHIPY
Trigger: GTATGGGATATGGCCTCCCCAACTGACATTACCCTC...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTGGGGCTGGGCTGCTCTaGCCAGGTGCTTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLGAGLL*PGAWHS
Trigger: GGAATGCCAAGCACCTGGCCAGAGCAGCCCAGCCCC...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCAAAGATACAGGCACCTaGGTATTCACAGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAAKDTGT*VFTGPD
Trigger: ATCAGGGCCTGTGAATACCCAGGTGCCTGTATCTTT...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCCCCTTCTGCAAATACTaGGTGTGGGAGAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSPFCKY*VWEKQK
Trigger: CTTCTGCTTCTCCCACACCCAGTATTTGCAGAAGGG...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAACCCTTCTGCAAATACTaGGTGTGGGAGAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKPFCKY*VWEKQK
Trigger: CTTCTGCTTCTCCCACACCCAGTATTTGCAGAAGGG...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGAGGCTGGTAAAATTATaGCTATTGGGCAATATTTTG +
Preference number: 4 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLRLVKL*LLGNIL
Trigger: CAAAATATTGCCCAATAGCCATAATTTTACCAGCCT...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGTGGAGAGCAAAACCCTaGGCACCAATAAACATTCAA +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWWRAKP*APINIQ
Trigger: TTGAATGTTTATTGGTGCCCAGGGTTTTGCTCTCCA...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGAGGGACATGTACAAATaGCCTTCCATCCATGATTCA +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWRDMYK*PSIHDS
Trigger: TGAATCATGGATGGAAGGCCATTTGTACATGTCCCT...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAATGCTCTGCTACAGACTaGAGGGTGTTGCCATCTAAG +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKCSATD*RVLPSK
Trigger: CTTAGATGGCAACACCCTCCAGTCTGTAGCAGAGCA...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGTGCACTAATCTGGGTTaGACTGCTCTGCTACAGACT +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLCTNLG*TALLQT
Trigger: AGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCA...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGATCATTGGAGTGCACTaGCCATCCCTCAGATTTGTC +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLIIGVH*PSLRFV
Trigger: GACAAATCTGAGGGATGGCCAGTGCACTCCAATGAT...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAACTTTTCATAGCTTGCTaGGAGTTTCCGTTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKLFIAC*EFPLLG
Trigger: CCCAAGCAACGGAAACTCTCAGCAAGCTATGAAAAG...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTGACCGTGGAATCCGATaGTCCTGTTATGATCACTCT +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLDRGIR*SCYDHS
Trigger: AGAGTGATCATAACAGGATCATCGGATTCCACGGTC...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTAGTCAACACAATAGATaGCGAACCCTGATAGTGGCC +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSSQHNR*RTLIVA
Trigger: GGCCACTATCAGGGTTCGTCATCTATTGTGTTGACT...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCATGCCTTTTAAATGTCTaGCCTGTGTGTTTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPCLLNV*PVCFSG
Trigger: CCCTGAAAAACACACAGGTCAGACATTTAAAAGGCA...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCATATTGGGCAATATTTTaGGACAGCTCGAAACCCATG +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPYWAIF*DSSKPM
Trigger: CATGGGTTTCGAGCTGTCTCAAAATATTGCCCAATA...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCGCAAAAGGGAGATGCTaGGAAGGTCAACAGTACCAA +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSAKGRC*EGQQYQ
Trigger: TTGGTACTGTTGACCTTCTCAGCATCTCCCTTTTGC...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAGCTGAGAGTTTCCGTTaGTTGGGCACAATCATACTG +
Preference number: 4 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQAESFR*LGTIIL
Trigger: CAGTATGATTGTGCCCAAGCAACGGAAACTCTCAGC...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGCTGAGAGTTTCCGTTaGTTGGGCACAATCATACTG +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAAESFR*LGTIIL
Trigger: CAGTATGATTGTGCCCAAGCAACGGAAACTCTCAGC...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCTTGAGTGCCTTCTCTTaGAGCACCGCCTCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISILSAFS*STASAG
Trigger: CCCGGCCGAGGCGGTGCTGCAAGAGAAGGCACTCAA...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACCCATCCTCTTCGTTCTaGCAGGCCTCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHPSSSF*QASPQR
Trigger: TCTCTGTGGAGAGGCCTGGCAGAACGAAGAGGATGG...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGAACAGTAAACTCCTTTaGTTGTTTCACTTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWNSKLL*LFHFGS
Trigger: ACTGCCGAAGTGAAACAAGCAAAGGAGTTTACTGTT...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTAACCATTACGCAGAATaGACCAAGCGATTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVNHYAE*TKRLAL
Trigger: CAGAGCCAATCGCTTGGTGCATTCTGCGTAATGGTT...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTAGGTCCAGCTGTTTATaGTGTTCACCAATCGCCACA +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLRSSCL*CSPIAT
Trigger: TGTGGCGATTGGTGAACAGCATAAACAGCTGGACCT...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTGGCAGCTCACACAGCTaGCTTCCGAGTGACTGGGTT +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVGSSHS*LPSDWV
Trigger: AACCCAGTCACTCGGAAGGCAGCTGTGTGAGCTGCC...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCGGTTTAAGCAGAGTCTaGCACAGCTGTTGTATGTCT +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAAGLSRV*HSCCMS
Trigger: AGACATACAACAGCTGTGCCAGACTCTGCTTAAACC...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCATACTGGAAGTGCCATTaGCAAGTTTTGTTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPYWKCH*QVLFWP
Trigger: TGGCCAAAACAAAACTTGCCAATGGCACTTCCAGTA...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTATCCAATCCCCGAGCTaGCAGAGCAGTTATGAAATC +
Preference number: 4 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVIQSPS*QSSYEI
Trigger: GATTTCATAACTGCTCTGCCAGCTCGGGGATTGGAT...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGCTCTATAAAAAGAGTTaGGAGGAGCATTCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLLYKKS*EEHSRQ
Trigger: CTGACGGGAATGCTCCTCCCAACTCTTTTTATAGAG...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTAGGACTGAACCTGTATaGCCTGTGAGAATTCGCTTG +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLRTEPV*PVRIRL
Trigger: CAAGCGAATTCTCACAGGCCATACAGGTTCAGTCCT...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCTATCCCATACAGCAATaGAACGATCTTTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAAYPIQQ*NDLWSR
Trigger: CCTGCTCCAAAGATCGTTCCATTGCTGTATGGGATA...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGTATCCCATACAGCAATaGAACGATCTTTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLYPIQQ*NDLWSR
Trigger: CCTGCTCCAAAGATCGTTCCATTGCTGTATGGGATA...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTCTGAGTAGACCGTCCTaGGCCGACTGCAGACCAACT +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVLSRPS*ADCRPT
Trigger: AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAG...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGAATGCACCAAGCGATTaGCTCTGGCCATTTCAAATC +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLNAPSD*LWPFQI
Trigger: GATTTGAAATGGCCAGAGCCAATCGCTTGGTGCATT...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTAAAGATACAGGCACCTaGGTATTCACAGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSKDTGT*VFTGPD
Trigger: ATCAGGGCCTGTGAATACCCAGGTGCCTGTATCTTT...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTAAAGATACAGGCACCTaGGTATTCACAGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAKDTGT*VFTGPD
Trigger: ATCAGGGCCTGTGAATACCCAGGTGCCTGTATCTTT...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACTGTGTGCTCCCAGGTTaGTGTGGCACAGGTACCCTT +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHCVLPG*CGTGTL
Trigger: AAGGGTACCTGTGCCACACCAACCTGGGAGCACACA...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAACCTGGGGAGACCAGCTaGGTGCACATTAATAGTATT +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKPGETS*VHINSI
Trigger: AATACTATTAATGTGCACCCAGCTGGTCTCCCCAGG...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCAGTGGGTACACCTTaGGAAGAGGATACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSSVGTP*EEDTFL
Trigger: CAAGAAGGTATCCTCTTCCCAAGGTGTACCCACTGA...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCATGGAGAGCAAAACCCTaGGCACCAATAAACATTCAA +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPWRAKP*APINIQ
Trigger: TTGAATGTTTATTGGTGCCCAGGGTTTTGCTCTCCA...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCCAACTGAACCTAGATTaGAGAGCAAAACCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSQLNLD*RAKPWA
Trigger: TGCCCAGGGTTTTGCTCTCCAATCTAGGTTCAGTTG...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCAACTGAACCTAGATTaGAGAGCAAAACCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLQLNLD*RAKPWA
Trigger: TGCCCAGGGTTTTGCTCTCCAATCTAGGTTCAGTTG...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAACAACTGAACCTAGATTaGAGAGCAAAACCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKQLNLD*RAKPWA
Trigger: TGCCCAGGGTTTTGCTCTCCAATCTAGGTTCAGTTG...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTGGAGAGAGGACAACTTaGAGAATATCCTCAACTGGG +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLGERTT*RISSTG
Trigger: CCCAGTTGAGGATATTCTCCAAGTTGTCCTCTCTCC...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCTGCAGAGATGGTAAGTaGGGTTTACCTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAACRDGK*GLPSLE
Trigger: TTCCAGAGAAGGTAAACCCCACTTACCATCTCTGCA...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGTGCAGCAAGGCATGCTaGTCTTGTCCAAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRCSKAC*SCPSSS
Trigger: GGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAAGGGACATGTACAAATaGCCTTCCATCCATGATTCA +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPRDMYK*PSIHDS
Trigger: TGAATCATGGATGGAAGGCCATTTGTACATGTCCCT...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTTGCACTAATCTGGGTTaGACTGCTCTGCTACAGACT +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLCTNLG*TALLQT
Trigger: AGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCA...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACCGGGCTGCACTAATCTaGGTTGGACTGCTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHRAALI*VGLLCY
Trigger: GTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCG...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTTGGTTAAAGGAGGTCTaGTCTGTTGGTGAACAACTG +
Preference number: 4 (lower is better)
Translates to: DTFLPGETSWVHINSILCWLKEV*SVGEQL
Trigger: CAGTTGTTCACCAACAGACCAGACCTCCTTTAACCA...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCTATTCCCCTAAGAAATaGCTCTCTTTCCGATACTAT +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVYSPKK*LSFRYY
Trigger: ATAGTATCGGAAAGAGAGCCATTTCTTAGGGGAATA...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTGAGCGCCAGCTGTGCTaGTTGGAAAGCACATATTTT +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLERQLC*LESTYF
Trigger: AAAATATGTGCTTTCCAACCAGCACAGCTGGCGCTC...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 72 bp CCAAAAGGTCACGTGTCTGTACCTCCTCATCTGCCTTaGAAGGGGTTTCAGCCTGTCTTTAAGAAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: PKGHVSVPPHLP*KGFQPVFKKGF
Trigger: GAAACCTTTCTTAAAGACAGGCTGAAACCCCTTCAAAGGCAGATGAGGAGGTACAGACACGTGACCTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTAATTCTGGAAAGCTGTaGGTGCGCCAGTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVNSGKL*VRQSLG
Trigger: ACCCAGGGACTGGCGCACTCACAGCTTTCCAGAATT...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370187.8
CDS-3UTR TCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAACAGTCTTCTCTCTCTaGGGAATTCTGGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQTVFSL*GILESC
Trigger: ACAGCTTTCCAGAATTCCTCAGAGAGAGAAGACTGT...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370187.8
CDS-3UTR TCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTTTTGGCATCCAGGTATaGCAGAATGTTCTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: DTFLPGETSWVHINSILCFGIQV*QNVLSN
Trigger: ATTGCTGAGAACATTCTGTCATACCTGGATGCCAAA...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGTTTGGCATCCAGGTATaGCAGAATGTTCTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLFGIQV*QNVLSN
Trigger: ATTGCTGAGAACATTCTGTCATACCTGGATGCCAAA...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCTTTTATCCCAGATCTTaGTTGTGTTGTCTCGAAGGC +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAAFYPRS*LCCLEG
Trigger: GCCTTCGAGACAACACAATCAAGATCTGGGATAAAA...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTTAGGAAGTCCCAGATaGGGATTGTGTCATCATGTG +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSLGSPR*GLCHHV
Trigger: CACATGATGACACAATCCTCATCTGGGACTTCCTAA...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGCCCCGATCTCCTTTGTaGTGTACTGGACATGTCTCA +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRPRSPL*CTGHVS
Trigger: TGAGACATGTCCAGTACATCACAAAGGAGATCGGGG...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTCAACAAACTGGTAAATaGCCCCCAGAGCTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSQQTGK*PPELRN
Trigger: ATTTCTCAGCTCTGGGGGTCATTTACCAGTTTGTTG...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTCAACAAACTGGTAAATaGCCCCCAGAGCTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAQQTGK*PPELRN
Trigger: ATTTCTCAGCTCTGGGGGTCATTTACCAGTTTGTTG...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCCATGATCCTAGGTTGTaGACATATTGGTACACTGAC +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAAHDPRL*TYWYTD
Trigger: GTCAGTGTACCAATATGTTCACAACCTAGGATCATG...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCGGAGTCTCAAAGCCCTaGTCCTCGGCTAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISIGVSKP*SSASPG
Trigger: CCCTGGACTAGCCGAGGAGCAGGGCTTTGAGACTCC...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTCCGTCCTGGGCCGACTaGAGACCAACTGTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLPSWAD*RPTVSQ
Trigger: TTGGGACACAGTTGGTCTGCAGTCGGCCCAGGACGG...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTGCTGCTCTGGCCAGGTaGTTGGCATTCCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVAALAR*LAFLQL
Trigger: TAACTGCAGGAATGCCAAGCACCTGGCCAGAGCAGC...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACGCAGCTTTGCCCTTCTaGAAATACTGGGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHAALPF*KYWVWE
Trigger: CTCCCACACCCAGTATTTGCAGAAGGGCAAAGCTGC...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGGGAGACCAGCTGGGTaGACATTAATAGTATTCTGT +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAGRPAG*TLIVFC
Trigger: ACAGAATACTATTAATGTGCACCCAGCTGGTCTCCC...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTAAGAGGATACCTTCTTaGCTGGGGAGACCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVKRIPS*LGRPAG
Trigger: CCCAGCTGGTCTCCCCAGGCAAGAAGGTATCCTCTT...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACACGTGCAGCAAGGCATaGTGGTCTTGTCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHTCSKA*WSCPSS
Trigger: GCTACTTGGACAAGACCAGCATGCCTTGCTGCACGT...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACTGGGTTGGACTGCTCTaGTACAGACTGGAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHWVGLL*YRLEGV
Trigger: AACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCA...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCGCTTCTAAAGATCAATaGATTAAGTTCCACCTGAAA +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVASKDQ*IKFHLK
Trigger: TTTCAGGTGGAACTTAATGCATTGATCTTTAGAAGC...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCATTTTAGATGTCATCTaGCTCCAGGACATTTTAGAT +
Preference number: 4 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVILDVI*LQDILD
Trigger: ATCTAAAATGTCCTGGAGGCAGATGACATCTAAAAT...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGTACTGGAAGTGCCATTaGCAAGTTTTGTTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLYWKCH*QVLFWP
Trigger: TGGCCAAAACAAAACTTGCCAATGGCACTTCCAGTA...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCTACTGGAAGTGCCATTaGCAAGTTTTGTTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAAYWKCH*QVLFWP
Trigger: TGGCCAAAACAAAACTTGCCAATGGCACTTCCAGTA...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTTGGGCACAATCATACTaGAAGTGCCATTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAWAQSY*KCHWQV
Trigger: AACTTGCCAATGGCACTTCCAGTATGATTGTGCCCA...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAATGGGCACAATCATACTaGAAGTGCCATTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKWAQSY*KCHWQV
Trigger: AACTTGCCAATGGCACTTCCAGTATGATTGTGCCCA...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTCTCTATAAAAAGAGTTaGGAGGAGCATTCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSLYKKS*EEHSRQ
Trigger: CTGACGGGAATGCTCCTCCCAACTCTTTTTATAGAG...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTCGCACCAATTCCTCATaGCCTTCTAACACTCGTAAA +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECARTNSS*PSNTRK
Trigger: TTTACGAGTGTTAGAAGGCCATGAGGAATTGGTGCG...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAACGCACCAATTCCTCATaGCCTTCTAACACTCGTAAA +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKRTNSS*PSNTRK
Trigger: TTTACGAGTGTTAGAAGGCCATGAGGAATTGGTGCG...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTAACTTTAATGGGTCCTaGGCAAGTATGAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECANFNGS*ASMRSV
Trigger: CACTGACCTCATACTTGCCCAGGACCCATTAAAGTT...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTCCAAGCGATTGGCTCTaGCCATTTCAAATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVPSDWL*PFQIFL
Trigger: CAGAAAGATTTGAAATGGCCAGAGCCAATCGCTTGG...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTCCAAGCGATTGGCTCTaGCCATTTCAAATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSPSDWL*PFQIFL
Trigger: CAGAAAGATTTGAAATGGCCAGAGCCAATCGCTTGG...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTAGTAACAACATTCAGTaGGTACACCTTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSSNNIQ*VHLGKR
Trigger: CCTCTTCCCAAGGTGTACCCACTGAATGTTGTTACT...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCTTTCTCTGTAGCATTTaGGTAGCTGGGAAGGGAATT +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAAFLCSI*VAGKGI
Trigger: AATTCCCTTCCCAGCTACCCAAATGCTACAGAGAAA...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGAGAATATCCTCAACTaGGCTAATGGCTCCACATCT +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAENILN*ANGSTS
Trigger: AGATGTGGAGCCATTAGCCCAGTTGAGGATATTCTC...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAAGAGAATATCCTCAACTaGGCTAATGGCTCCACATCT +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKENILN*ANGSTS
Trigger: AGATGTGGAGCCATTAGCCCAGTTGAGGATATTCTC...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTTGCAGAGATGGTAAGTaGGGTTTACCTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVCRDGK*GLPSLE
Trigger: TTCCAGAGAAGGTAAACCCCACTTACCATCTCTGCA...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCGAGACTAATCTACAATaGGGACACCTTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSETNLQ*GHLQLC
Trigger: ACAGAGCTGAAGGTGTCCCCATTGTAGATTAGTCTC...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTAGGGACATGTACAAATaGCCTTCCATCCATGATTCA +
Preference number: 4 (lower is better)
Translates to: DTFLPGETSWVHINSILCRDMYK*PSIHDS
Trigger: TGAATCATGGATGGAAGGCCATTTGTACATGTCCCT...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTAGCTGTTCAGACCAATaGTACCAGGAGCCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVSCSDQ*YQEPAR
Trigger: CCTTGCCGGCTCCTGGTACCATTGGTCTGAACAGCT...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTTGGTTAAAGGAGGTCTaGTCTGTTGGTGAACAACTG +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLWLKEV*SVGEQL
Trigger: CAGTTGTTCACCAACAGACCAGACCTCCTTTAACCA...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGACTATGTTGACACTGTaGTTAAAGGAGGTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLTMLTL*LKEVWS
Trigger: AGACCAGACCTCCTTTAACCACAGTGTCAACATAGT...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 72 bp CAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTaGGAATGTGCTGAGACTTTGTCTCTCTTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: QWGHLQLCFYHS*ECAETLSLFSF
Trigger: AAACGAAAAGAGAGACAAAGTCTCAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAATTTTATCCCAGATCTTaGTTGTGTTGTCTCGAAGGC +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKFYPRS*LCCLEG
Trigger: GCCTTCGAGACAACACAATCAAGATCTGGGATAAAA...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTCCGATGATCCTGTTATaGTCACTCTCTCATCATACT +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAPMILL*SLSHHT
Trigger: AGTATGATGAGAGAGTGATCATAACAGGATCATCGG...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACGATAGTGTTGTCAGATaGGCCACTCACTACCAGCCT +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHDSVVR*ATHYQP
Trigger: AGGCTGGTAGTGAGTGGCTCATCTGACAACACTATC...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCACATCATGTGAACTACTaGCAATCTGGAATTCATCAA +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPHHVNY*QSGIHQ
Trigger: TTGATGAATTCCAGATTGTCAGTAGTTCACATGATG...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCGATTGTGTCATCATGTaGACTACTGACAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAADCVIM*TTDNLE
Trigger: TTCCAGATTGTCAGTAGTTCACATGATGACACAATC...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGGTCCTGGGCAAGTATaGGGTCAGTGTATGGTTATT +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRGPGQV*GQCMVI
Trigger: AATAACCATACACTGACCTCATACTTGCCCAGGACC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGAAAAGATGCAGCCATTaGTGGAGCCCAGGAAACTTC +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRKRCSH*WSPGNF
Trigger: GAAGTTTCCTGGGCTCCATCAATGGCTGCATCTTTT...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTTATTGGGCAATATTTTaGGACAGCTCGAAACCCATG +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAYWAIF*DSSKPM
Trigger: CATGGGTTTCGAGCTGTCTCAAAATATTGCCCAATA...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTTTCGGAAACAAGTTATaGGGGCCAGACTTTTATTAC +
Preference number: 4 (lower is better)
Translates to: DTFLPGETSWVHINSILCFGNKL*GPDFYY
Trigger: GTAATAAAAGTCTGGCCCTCATAACTTGTTTCCGAA...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGCAAAAGGGAGATGCTaGGAAGGTCAACAGTACCAA +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRAKGRC*EGQQYQ
Trigger: TTGGTACTGTTGACCTTCTCAGCATCTCCCTTTTGC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAAACATATTGGTACACTaGCTACACATCACCATAACA +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPNILVH*LHITIT
Trigger: TGTTATGGTGATGTGTAGTCAGTGTACCAATATGTT...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTCATGATCCTAGGTTGTaGACATATTGGTACACTGAC +
Preference number: 4 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVHDPRL*TYWYTD
Trigger: GTCAGTGTACCAATATGTTCACAACCTAGGATCATG...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACCTCGGTACCATTCCTTaGACACAAGTTCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHLGTIP*TQVQQH
Trigger: GTGCTGCTGAACTTGTGTGCAAGGAATGGTACCGAG...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAAACTGCAAACAGGCAATaGCTCGTTTGTGTCCATTTA +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKTANRQ*LVCVHL
Trigger: TAAATGGACACAAACGAGGCATTGCCTGTTTGCAGT...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCGATTGTTACTGTTGTTaGTCATCCTGGTATTGGCAG +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSDCYCC*SSWYWQ
Trigger: CTGCCAATACCAGGATGAGCAACAACAGTAACAATC...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCAACTCTTCCAAGTGTTaGATTTTCTGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSNSSKC*IFWLIW
Trigger: CCAGATCAGCCAGAAAATGCAACACTTGGAAGAGTT...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAAACTCTTCCAAGTGTTaGATTTTCTGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQNSSKC*IFWLIW
Trigger: CCAGATCAGCCAGAAAATGCAACACTTGGAAGAGTT...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTCCGAGTGACTGGGTTTaGCTGACCCTTGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLPSDWV*LTLAEV
Trigger: GACCTCAGCAAGGGTCAGGCAAACCCAGTCACTCGG...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCGGCAGCTCACACAGCTaGCTTCCGAGTGACTGGGTT +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISIGSSHS*LPSDWV
Trigger: AACCCAGTCACTCGGAAGGCAGCTGTGTGAGCTGCC...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTACGTGCAGCAAGGCATaGTGGTCTTGTCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVTCSKA*WSCPSS
Trigger: GCTACTTGGACAAGACCAGCATGCCTTGCTGCACGT...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCACACCAGAAAGAATTTTaGCAAGGGACATGTACAAAT +
Preference number: 4 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPHQKEF*QGTCTN
Trigger: ATTTGTACATGTCCCTTGGCAAAATTCTTTCTGGTG...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACCAGACTGGAGGGTGTTaGCATCTAAGGCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHQTGGC*HLRQKG
Trigger: TCCCTTTTGCCTTAGATGGCAACACCCTCCAGTCTG...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTCAGCACATAGTGATTTaGCATCCAGGTATGACAGAA +
Preference number: 4 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVQHIVI*HPGMTE
Trigger: TTCTGTCATACCTGGATGCCAAATCACTATGTGCTG...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCAGCACATAGTGATTTaGCATCCAGGTATGACAGAA +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLQHIVI*HPGMTE
Trigger: TTCTGTCATACCTGGATGCCAAATCACTATGTGCTG...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGGAGAGAGGACAACTTaGAGAATATCCTCAACTGGG +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRGERTT*RISSTG
Trigger: CCCAGTTGAGGATATTCTCCAAGTTGTCCTCTCTCC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGTGCACTAATCTGGGTTaGACTGCTCTGCTACAGACT +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRCTNLG*TALLQT
Trigger: AGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCA...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCGCCAGCTGTGCTGGTTaGAAAGCACATATTTTAGAT +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSASCAG*KAHILD
Trigger: ATCTAAAATATGTGCTTTCCAACCAGCACAGCTGGC...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGAGCGCCAGCTGTGCTaGTTGGAAAGCACATATTTT +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRERQLC*LESTYF
Trigger: AAAATATGTGCTTTCCAACCAGCACAGCTGGCGCTC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGATCATTGGAGTGCACTaGCCATCCCTCAGATTTGTC +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRIIGVH*PSLRFV
Trigger: GACAAATCTGAGGGATGGCCAGTGCACTCCAATGAT...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 72 bp ATTCCCCTAAGAAATGGCTCTCTTTCCGATACTATGTaGACACTGTGGTTAAAGGAGGTCTGGTCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: IPLRNGSLSDTM*TLWLKEVWSVG
Trigger: ACCAACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCCATTTCTTAGGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACCTTTTCATAGCTTGCTaGGAGTTTCCGTTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHLFIAC*EFPLLG
Trigger: CCCAAGCAACGGAAACTCTCAGCAAGCTATGAAAAG...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTCAGGAGGTTTGTTTTTaGATAAATACTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSQEVCF*INTVPI
Trigger: GATGGGGACAGTATTTATTCAAAAACAAACCTCCTG...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTGTTTCACTTCGGCAGTaGATTCTCTGTAAACTATGT +
Preference number: 4 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVVSLRQ*ILCKLC
Trigger: ACATAGTTTACAGAGAATTCACTGCCGAAGTGAAAC...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTGTTTCACTTCGGCAGTaGATTCTCTGTAAACTATGT +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLVSLRQ*ILCKLC
Trigger: ACATAGTTTACAGAGAATTCACTGCCGAAGTGAAAC...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTCTGGAGACAGAGGACTaGACCTGTATGGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLLETED*TCMACE
Trigger: CTCACAGGCCATACAGGTTCAGTCCTCTGTCTCCAG...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTACTGCTTCACAATGGTaGATCAACGTGTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSTASQW*INVFSI
Trigger: AATGCTAAACACGTTGATTCACCATTGTGAAGCAGT...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTGATAGTGTTGTCAGATaGGCCACTCACTACCAGCCT +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVDSVVR*ATHYQP
Trigger: AGGCTGGTAGTGAGTGGCTCATCTGACAACACTATC...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCCATCATGTGAACTACTaGCAATCTGGAATTCATCAA +
Preference number: 4 (lower is better)
Translates to: FHTLHGIKETAESRKDAAHHVNY*QSGIHQ
Trigger: TTGATGAATTCCAGATTGTCAGTAGTTCACATGATG...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGATTGTGTCATCATGTaGACTACTGACAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECADCVIM*TTDNLE
Trigger: TTCCAGATTGTCAGTAGTTCACATGATGACACAATC...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTGATTGTGTCATCATGTaGACTACTGACAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLDCVIM*TTDNLE
Trigger: TTCCAGATTGTCAGTAGTTCACATGATGACACAATC...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTATCATCATGCTCTTTTaGTTTCTCTCTTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLIIMLF*FLSSAP
Trigger: TGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGAT...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTACAGTCTTCTCTCTCTaGGGAATTCATAAACTTGAG +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLTVFSL*GIHKLE
Trigger: CTCAAGTTTATGAATTCCTCAGAGAGAGAAGACTGT...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408038.6
CDS-3UTR GCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTTTATTGAAACGCAAGTaGAGAACTGCTTCACAATGG +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSLLKRK*RTASQW
Trigger: CCATTGTGAAGCAGTTCTGCACTTGCGTTTCAATAA...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTAGTTCTATCCCCAGATaGAGAAACAATGTACTTGTC +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECASSIPR*RNNVLV
Trigger: GACAAGTACATTGTTTCTGCATCTGGGGATAGAACT...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTAGTTCTATCCCCAGATaGAGAAACAATGTACTTGTC +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSSSIPR*RNNVLV
Trigger: GACAAGTACATTGTTTCTGCATCTGGGGATAGAACT...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTGTTAATGAGAGGAAATaGAATCAGCAACTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSVNERK*NQQLLS
Trigger: GGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAAC...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCAAGAGGATACCTTCTTaGCTGGGGAGACCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISIKRIPS*LGRPAG
Trigger: CCCAGCTGGTCTCCCCAGGCAAGAAGGTATCCTCTT...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGGTTTAAGCAGAGTCTaGCACAGCTGTTGTATGTCT +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRGLSRV*HSCCMS
Trigger: AGACATACAACAGCTGTGCCAGACTCTGCTTAAACC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACATCCAATCCCCGAGCTaGCAGAGCAGTTATGAAATC +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHIQSPS*QSSYEI
Trigger: GATTTCATAACTGCTCTGCCAGCTCGGGGATTGGAT...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGCCAAGCGATTGGCTCTaGCCATTTCAAATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRPSDWL*PFQIFL
Trigger: CAGAAAGATTTGAAATGGCCAGAGCCAATCGCTTGG...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGAATGCACCAAGCGATTaGCTCTGGCCATTTCAAATC +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRNAPSD*LWPFQI
Trigger: GATTTGAAATGGCCAGAGCCAATCGCTTGGTGCATT...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAATCCTTTGTGATGTACTaGACATGTCTCAAAACAGTC +
Preference number: 4 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQSFVMY*TCLKTV
Trigger: GACTGTTTTGAGACATGTCCAGTACATCACAAAGGA...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGAGACTAATCTACAATaGGGACACCTTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRETNLQ*GHLQLC
Trigger: ACAGAGCTGAAGGTGTCCCCATTGTAGATTAGTCTC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCCTCAGATTTGTCTaGGCTGGCCTGAGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLSLRFV*AGLSGH
Trigger: GTGACCACTCAGGCCAGCCCAGACAAATCTGAGGGA...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCGCTTACTATTTTCTaGTCATCATACTGTAAACAG +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLPLTIF*SSYCKQ
Trigger: CTGTTTACAGTATGATGATCAGAAAATAGTAAGCGG...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAACCGCTTACTATTTTCTaGTCATCATACTGTAAACAG +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKPLTIF*SSYCKQ
Trigger: CTGTTTACAGTATGATGATCAGAAAATAGTAAGCGG...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTGACCGTGGAATCCGATaGTCCTGTTATGATCACTCT +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVDRGIR*SCYDHS
Trigger: AGAGTGATCATAACAGGATCATCGGATTCCACGGTC...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCCATCATGTGAACTACTaGCAATCTGGAATTCATCAA +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSHHVNY*QSGIHQ
Trigger: TTGATGAATTCCAGATTGTCAGTAGTTCACATGATG...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGCAAGGTTGACACGGTaGGATCAATATTTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRARLTR*DQYLRD
Trigger: ATCTCTCAAATATTGATCTCACCGTGTCAACCTTGC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGTGCCTTTTAAATGTCTaGCCTGTGTGTTTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRCLLNV*PVCFSG
Trigger: CCCTGAAAAACACACAGGTCAGACATTTAAAAGGCA...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCATAATCAATTCCCACTaGAATCATGCAGAGATGGTA +
Preference number: 4 (lower is better)
Translates to: FHLKPGSHHHALLISLFSIINSH*NHAEMV
Trigger: TACCATCTCTGCATGATTTCAGTGGGAATTGATTAT...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCGGTCTGGTCTGTTGGTaGACAACTGTGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISIGLVCW*TTVWRK
Trigger: CTTCCTCCACACAGTTGTTCACCAACAGACCAGACC...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTAACATATTGGTACACTaGCTACACATCACCATAACA +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLNILVH*LHITIT
Trigger: TGTTATGGTGATGTGTAGTCAGTGTACCAATATGTT...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTAACATATTGGTACACTaGCTACACATCACCATAACA +
Preference number: 4 (lower is better)
Translates to: NLQWGHLQLCFYHSLECANILVH*LHITIT
Trigger: TGTTATGGTGATGTGTAGTCAGTGTACCAATATGTT...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGCATGATCCTAGGTTGTaGACATATTGGTACACTGAC +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRHDPRL*TYWYTD
Trigger: GTCAGTGTACCAATATGTTCACAACCTAGGATCATG...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGACGCAAGTGCAGAACTaGTTCACAATGGTGAATCAA +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRTQVQN*FTMVNQ
Trigger: TTGATTCACCATTGTGAAGCAGTTCTGCACTTGCGT...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACTTCCCACTGAAATCATaGAGAGATGGTAAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHFPLKS*RDGKWG
Trigger: ACCCCACTTACCATCTCTGCATGATTTCAGTGGGAA...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTCACCAGAAAGAATTTTaGCAAGGGACATGTACAAAT +
Preference number: 4 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVHQKEF*QGTCTN
Trigger: ATTTGTACATGTCCCTTGGCAAAATTCTTTCTGGTG...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTAGGACTGAACCTGTATaGCCTGTGAGAATTCGCTTG +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVRTEPV*PVRIRL
Trigger: CAAGCGAATTCTCACAGGCCATACAGGTTCAGTCCT...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACAGTAACAACATTCAGTaGGTACACCTTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHSNNIQ*VHLGKR
Trigger: CCTCTTCCCAAGGTGTACCCACTGAATGTTGTTACT...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTATGTTCTCAGCAATATaGTCCAATCCCCGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLMFSAI*SNPRAG
Trigger: GCCAGCTCGGGGATTGGATCATATTGCTGAGAACAT...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGCAGGAGGTTTGTTTTTaGATAAATACTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRQEVCF*INTVPI
Trigger: GATGGGGACAGTATTTATTCAAAAACAAACCTCCTG...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTTCTCTTAAGCTACCTTaGTCACGGTCTTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVSLKLP*SRSWQR
Trigger: TCTTTGCCAAGACCGTGATCAAGGTAGCTTAAGAGA...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGAGTTCTATCCCCAGATaGAGAAACAATGTACTTGTC +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRSSIPR*RNNVLV
Trigger: GACAAGTACATTGTTTCTGCATCTGGGGATAGAACT...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCCAAGTAGCTCCAGTGTaGACCAAAAGGTCACGTGTC +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISIQVAPV*TKRSRV
Trigger: GACACGTGACCTTTTGGTGCACACTGGAGCTACTTG...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTGCTTCTAAAGATCAATaGATTAAGTTCCACCTGAAA +
Preference number: 4 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLASKDQ*IKFHLK
Trigger: TTTCAGGTGGAACTTAATGCATTGATCTTTAGAAGC...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTGCTTCTAAAGATCAATaGATTAAGTTCCACCTGAAA +
Preference number: 4 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVASKDQ*IKFHLK
Trigger: TTTCAGGTGGAACTTAATGCATTGATCTTTAGAAGC...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAAATTTTAGATGTCATCTaGCTCCAGGACATTTTAGAT +
Preference number: 4 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKILDVI*LQDILD
Trigger: ATCTAAAATGTCCTGGAGGCAGATGACATCTAAAAT...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTAGAGTTTCCGTTGCTTaGGCACAATCATACTGGAAG +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVRVSVA*AQSYWK
Trigger: CTTCCAGTATGATTGTGCCCAAGCAACGGAAACTCT...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTCGCACCAATTCCTCATaGCCTTCTAACACTCGTAAA +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVRTNSS*PSNTRK
Trigger: TTTACGAGTGTTAGAAGGCCATGAGGAATTGGTGCG...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACTGGAGAGCAAAACCCTaGGCACCAATAAACATTCAA +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHWRAKP*APINIQ
Trigger: TTGAATGTTTATTGGTGCCCAGGGTTTTGCTCTCCA...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTTGCAGAGATGGTAAGTaGGGTTTACCTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVCRDGK*GLPSLE
Trigger: TTCCAGAGAAGGTAAACCCCACTTACCATCTCTGCA...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACGCCAGCTGTGCTGGTTaGAAAGCACATATTTTAGAT +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHASCAG*KAHILD
Trigger: ATCTAAAATATGTGCTTTCCAACCAGCACAGCTGGC...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTCAGCTGTTGTATGTCTaGAAAGCTGTGAGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLQLLYV*KAVSAP
Trigger: TGGCGCACTCACAGCTTTCCAGACATACAACAGCTG...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393441.8
CDS-3UTR TCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCGGTCCTGGGCAAGTATaGGGTCAGTGTATGGTTATT +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISIGPGQV*GQCMVI
Trigger: AATAACCATACACTGACCTCATACTTGCCCAGGACC...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACAACAGTAAACTCCTTTaGTTGTTTCACTTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHNSKLL*LFHFGS
Trigger: ACTGCCGAAGTGAAACAAGCAAAGGAGTTTACTGTT...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACTTATTGAAACGCAAGTaGAGAACTGCTTCACAATGG +
Preference number: 4 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHLLKRK*RTASQW
Trigger: CCATTGTGAAGCAGTTCTGCACTTGCGTTTCAATAA...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTAACCATTACGCAGAATaGACCAAGCGATTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLNHYAE*TKRLAL
Trigger: CAGAGCCAATCGCTTGGTGCATTCTGCGTAATGGTT...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCTCAGTGGGTACACCTTaGGAAGAGGATACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISISVGTP*EEDTFL
Trigger: CAAGAAGGTATCCTCTTCCCAAGGTGTACCCACTGA...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCGGAGAGAGGACAACTTaGAGAATATCCTCAACTGGG +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISIGERTT*RISSTG
Trigger: CCCAGTTGAGGATATTCTCCAAGTTGTCCTCTCTCC...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTGCCAGCTGTGCTGGTTaGAAAGCACATATTTTAGAT +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVASCAG*KAHILD
Trigger: ATCTAAAATATGTGCTTTCCAACCAGCACAGCTGGC...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCTCTTAAGCTACCTTaGTCACGGTCTTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLSLKLP*SRSWQR
Trigger: TCTTTGCCAAGACCGTGATCAAGGTAGCTTAAGAGA...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTGGGAGACCAGCTGGGTaGACATTAATAGTATTCTGT +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLGRPAG*TLIVFC
Trigger: ACAGAATACTATTAATGTGCACCCAGCTGGTCTCCC...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTTGGCAAGTTTTGTTTTaGCCACACAATTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVWQVLF*PHNSQS
Trigger: AGACTGAGAATTGTGTGGCCAAAACAAAACTTGCCA...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCTGGGCACAATCATACTaGAAGTGCCATTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISIWAQSY*KCHWQV
Trigger: AACTTGCCAATGGCACTTCCAGTATGATTGTGCCCA...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGAACTACTGACAATCTaGAATTCATCAAACTGTAGT +
Preference number: 4 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRELLTI*NSSNCS
Trigger: ACTACAGTTTGATGAATTCCAGATTGTCAGTAGTTC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTGGTTAAAGGAGGTCTaGTCTGTTGGTGAACAACTG +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLWLKEV*SVGEQL
Trigger: CAGTTGTTCACCAACAGACCAGACCTCCTTTAACCA...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTCCGATGATCCTGTTATaGTCACTCTCTCATCATACT +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLPMILL*SLSHHT
Trigger: AGTATGATGAGAGAGTGATCATAACAGGATCATCGG...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTGCAAGGTTGACACGGTaGGATCAATATTTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLARLTR*DQYLRD
Trigger: ATCTCTCAAATATTGATCTCACCGTGTCAACCTTGC...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCGCAAGGTTGACACGGTaGGATCAATATTTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISIARLTR*DQYLRD
Trigger: ATCTCTCAAATATTGATCTCACCGTGTCAACCTTGC...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCACGCAAGTGCAGAACTaGTTCACAATGGTGAATCAA +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISITQVQN*FTMVNQ
Trigger: TTGATTCACCATTGTGAAGCAGTTCTGCACTTGCGT...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTACTGCAAACAGGCAATaGCTCGTTTGTGTCCATTTA +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLTANRQ*LVCVHL
Trigger: TAAATGGACACAAACGAGGCATTGCCTGTTTGCAGT...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTAGAAAAGGCAGTTTTTaGCCCATTAATAAACCCTGT +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVRKGSF*PINKPC
Trigger: ACAGGGTTTATTAATGGGGCAAAAACTGCCTTTTCT...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCTTTCTCTGTAGCATTTaGGTAGCTGGGAAGGGAATT +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISIFLCSI*VAGKGI
Trigger: AATTCCCTTCCCAGCTACCCAAATGCTACAGAGAAA...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTTTCTCTGTAGCATTTaGGTAGCTGGGAAGGGAATT +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLFLCSI*VAGKGI
Trigger: AATTCCCTTCCCAGCTACCCAAATGCTACAGAGAAA...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCACTATGTTGACACTGTaGTTAAAGGAGGTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISITMLTL*LKEVWS
Trigger: AGACCAGACCTCCTTTAACCACAGTGTCAACATAGT...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
3UTR CAA 72 bp CTCTGTAGCATTTGGGTAGCTGGGAAGGGAATTACATaGAGAAAATATTTCTTAGGCTACGATGTATCATTA +
Preference number: 4 (lower is better)
Translates to: LCSIWVAGKGIT*RKYFLGYDVSL
Trigger: TAATGATACATCGTAGCCTAAGAAATATTTTCTCAATGTAATTCCCTTCCCAGCTACCCAAATGCTACAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCTTCGGAAACAAGTTATaGGGGCCAGACTTTTATTAC +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISIFGNKL*GPDFYY
Trigger: GTAATAAAAGTCTGGCCCTCATAACTTGTTTCCGAA...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTATCATCATGCTCTTTTaGTTTCTCTCTTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LFITHPIVNERKCNQQLLIIMLF*FLSSAP
Trigger: TGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGAT...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCTTATTGAAACGCAAGTaGAGAACTGCTTCACAATGG +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISILLKRK*RTASQW
Trigger: CCATTGTGAAGCAGTTCTGCACTTGCGTTTCAATAA...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTGAACTACTGACAATCTaGAATTCATCAAACTGTAGT +
Preference number: 4 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVELLTI*NSSNCS
Trigger: ACTACAGTTTGATGAATTCCAGATTGTCAGTAGTTC...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR TCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCATAATCAATTCCCACTaGAATCATGCAGAGATGGTA +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISIIINSH*NHAEMV
Trigger: TACCATCTCTGCATGATTTCAGTGGGAATTGATTAT...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR GCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCCAATCATACTGGAAGTaGCATTGGCAAGTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISIQSYWK*HWQVLF
Trigger: AAACAAAACTTGCCAATGGCACTTCCAGTATGATTG...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CCA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCGAACTACTGACAATCTaGAATTCATCAAACTGTAGT +
Preference number: 4 (lower is better)
Translates to: KCERFKFFRPLNFIPISIELLTI*NSSNCS
Trigger: ACTACAGTTTGATGAATTCCAGATTGTCAGTAGTTC...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS GCA 90 bp CGCCGAGGCCACTGGGTCCGCTCTCCGCCGGGGCCGCCCCTTTGGTaGCAGGCCGCAGCCAACGCAGCGCCCGGATCCCGCCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: RRGHWVRSPPGPPLW*QAAANAAPGSRLLF
Trigger: GAAGAGGAGGCGGGATCCGGGCGCTGCGTTGGCTGCGGCCTGGCACCAAAGGGGCGGCCCCGGCGGAGAGCGGACCCAGTGGCCTCGGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393441.8
ENST00000475200.5
CDS CCA 90 bp AATCGCCGAGGCCACTGGGTCCGCTCTCCGCCGGGGCCGCCCCTTTaGTGCCAGGCCGCAGCCAACGCAGCGCCCGGATCCCGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: NRRGHWVRSPPGPPL*CQAAANAAPGSRLL
Trigger: GAGGAGGCGGGATCCGGGCGCTGCGTTGGCTGCGGCCTGGCACCAAAGGGGCGGCCCCGGCGGAGAGCGGACCCAGTGGCCTCGGCGATT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393441.8
ENST00000475200.5
CDS CCA 90 bp CTCTTGCAGCACCGCCTCGGCCGGGTCCATAATCGCCGAGGCCACTaGGTCCGCTCTCCGCCGGGGCCGCCCCTTTGGTGCCAGGCCGCA +
Preference number: 5 (lower is better)
Translates to: LLQHRLGRVHNRRGH*VRSPPGPPLWCQAA
Trigger: TGCGGCCTGGCACCAAAGGGGCGGCCCCGGCGGAGAGCGGACCCAGTGGCCTCGGCGATTATGGACCCGGCCGAGGCGGTGCTGCAAGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393441.8
ENST00000408038.6
ENST00000475200.5
CDS-3UTR CAA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGGCCGGGGCCGCCCCTTaGGTGCCAGGCCGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLAGAAP*VPGRSQ
Trigger: TTGGCTGCGGCCTGGCACCAAAGGGGCGGCCCCGGC...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393441.8
ENST00000408038.6
CDS GCA 90 bp CACAGAGACCTGGGCATAGAGCACATAAACTTGAGTGCCTTCTCTTaGAGCACCGCCTCGGCCGGGTCCATAATCGCCGAGGCCACTGGG +
Preference number: 5 (lower is better)
Translates to: HRDLGIEHINLSAFS*STASAGSIIAEATG
Trigger: CCCAGTGGCCTCGGCGATTATGGACCCGGCCGAGGCGGTGCTGCAAGAGAAGGCACTCAAGTTTATGTGCTCTATGCCCAGGTCTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393441.8
ENST00000475200.5
CDS-3UTR CAA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCAGGCCTGTCCCATCATaGGAGTGCACTGGCCATCCC +
Preference number: 5 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCRPVPS*ECTGHP
Trigger: GGGATGGCCAGTGCACTCCAATGATGGGACAGGCCT...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTAGGCCTGTCCCATCATaGGAGTGCACTGGCCATCCC +
Preference number: 5 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGRPVPS*ECTGHP
Trigger: GGGATGGCCAGTGCACTCCAATGATGGGACAGGCCT...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTTTGCCACAGGGTCACTaGCAGCAAAGGCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTLPQGH*QQRPGA
Trigger: AGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAA...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGCTGTGTGCTCCCAGGTaGGTGTGGCACAGGTACCCT +
Preference number: 5 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLLCAPR*VWHRYP
Trigger: AGGGTACCTGTGCCACACCAACCTGGGAGCACACAG...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAGCCGGGGCCGCCCCTTaGGTGCCAGGCCGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQAGAAP*VPGRSQ
Trigger: TTGGCTGCGGCCTGGCACCAAAGGGGCGGCCCCGGC...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGCTTGAGTGCCTTCTCTaGCAGCACCGCCTCGGCCGG +
Preference number: 5 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWLECLL*QHRLGR
Trigger: CCGGCCGAGGCGGTGCTGCAAGAGAAGGCACTCAAG...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS GCA 90 bp CAGTCTTCTCTCTCTGAGGAATTCATAAACTTGAGTGCCTTCTCTTaGAGCACCGCCTCGGCCGGGTCCATAATCGCCGAGGCCACTGGG +
Preference number: 5 (lower is better)
Translates to: QSSLSEEFINLSAFS*STASAGSIIAEATG
Trigger: CCCAGTGGCCTCGGCGATTATGGACCCGGCCGAGGCGGTGCTGCAAGAGAAGGCACTCAAGTTTATGAATTCCTCAGAGAGAGAAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408038.6
CDS GCA 90 bp GGCACTGTCCACACTGTGGCAGCTTCAGCCCTGTCTCACATTGTCTaGTTCCTCGGCTTTACAGGAGTTGGTGACCCAAACGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: GTVHTVAASALSHIV*FLGFTGVGDPNGRR
Trigger: TCTCCTGCCGTTTGGGTCACCAACTCCTGTAAAGCCGAGGAAGCAGACAATGTGAGACAGGGCTGAAGCTGCCACAGTGTGGACAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493877.1
CDS-3UTR CAA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTCCTCCTCATCTGCCTTaGAAGGGGTTTCAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTPPHLP*KGFQPV
Trigger: GACAGGCTGAAACCCCTTCAAAGGCAGATGAGGAGG...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGCCACCCCTCCCACCTTaGTTTCCCCACACAATCAAG +
Preference number: 5 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLPPLPP*FPHTIK
Trigger: CTTGATTGTGTGGGGAAACAAAGGTGGGAGGGGTGG...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCACAGACTGGAGGGTGTaGCCATCTAAGGCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCTDWRV*PSKAKG
Trigger: CCCTTTTGCCTTAGATGGCAACACCCTCCAGTCTGT...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS CCA 90 bp TCTGTGAAAGAAAGTAAGCTGGAAAGCTGTGAGTGCGCCAGTCCCTaGGTTATACAGGCATCGCAGCGAAGGCATGCTGTCCGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SVKESKLESCECASP*VIQASQRRHAVRQA
Trigger: AGCCTGGCGGACAGCATGCCTTCGCTGCGATGCCTGTATAACCCAGGGACTGGCGCACTCACAGCTTTCCAGCTTACTTTCTTTCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475200.5
CDS-3UTR CAA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGTCTGAGAATCCACTGTaGCCACAGGGTCACTTGCAG +
Preference number: 5 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLSENPL*PQGHLQ
Trigger: CTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGA...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTCTTGAGTGCCTTCTCTaGCAGCACCGCCTCGGCCGG +
Preference number: 5 (lower is better)
Translates to: NLQWGHLQLCFYHSLECALECLL*QHRLGR
Trigger: CCGGCCGAGGCGGTGCTGCAAGAGAAGGCACTCAAG...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAACTTGAGTGCCTTCTCTaGCAGCACCGCCTCGGCCGG +
Preference number: 5 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKLECLL*QHRLGR
Trigger: CCGGCCGAGGCGGTGCTGCAAGAGAAGGCACTCAAG...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCCAGATCTTGATTGTGTaGTCTCGAAGGCCGCTTACT +
Preference number: 5 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCQILIV*SRRPLT
Trigger: AGTAAGCGGCCTTCGAGACAACACAATCAAGATCTG...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCCAGGCAATGCCTCGTTaGTGTCCATTTAAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCQAMPR*CPFKVL
Trigger: AAGGACCTTAAATGGACACAAACGAGGCATTGCCTG...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTAGTCTGGCACAGCTGTaGTATGTCTGTCTAAGTGAA +
Preference number: 5 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGSLAQL*YVCLSE
Trigger: TTCACTTAGACAGACATACAACAGCTGTGCCAGACT...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370187.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGGCAGCACATAGTGATTaGGCATCCAGGTATGACAGA +
Preference number: 5 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLAAHSD*ASRYDR
Trigger: TCTGTCATACCTGGATGCCAAATCACTATGTGCTGC...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTATAGAGCACATAAACTaGAGTGCCTTCTCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGIEHIN*SAFSCS
Trigger: GCTGCAAGAGAAGGCACTCAAGTTTATGTGCTCTAT...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370187.8
ENST00000393441.8
CDS-3UTR CAA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCATAGAGCACATAAACTaGAGTGCCTTCTCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCIEHIN*SAFSCS
Trigger: GCTGCAAGAGAAGGCACTCAAGTTTATGTGCTCTAT...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370187.8
ENST00000393441.8
CDS-3UTR CAA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTCTGAAGCCCACTAGCTaGGCAGCTCACACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: DTFLPGETSWVHINSILCLKPTS*AAHTAA
Trigger: GGCAGCTGTGTGAGCTGCCAAGCTAGTGGGCTTCAG...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTCTGTGTGCTCCCAGGTaGGTGTGGCACAGGTACCCT +
Preference number: 5 (lower is better)
Translates to: DTFLPGETSWVHINSILCLCAPR*VWHRYP
Trigger: AGGGTACCTGTGCCACACCAACCTGGGAGCACACAG...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCAGGAGGTCTGGTCTGTaGGTGAACAACTGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVRRSGL*VNNCVE
Trigger: CTCCACACAGTTGTTCACCAACAGACCAGACCTCCT...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGGGAAGCTTACATGTGTaGTTAGGCCTGTCCCATCAT +
Preference number: 5 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLGSLHV*LGLSHH
Trigger: ATGATGGGACAGGCCTAACAACACATGTAAGCTTCC...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCTGCCATTGGCAAGTTTaGTTTTGGCCACACAATTCT +
Preference number: 5 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCCHWQV*FWPHNS
Trigger: AGAATTGTGTGGCCAAAACAAAACTTGCCAATGGCA...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCCACTGCTCAAAGTATTaGACACACAGTTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCHCSKY*THSSFS
Trigger: GGAAAAGGAACTGTGTGTCAAATACTTTGAGCAGTG...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTACCATCATGCCATTATaGAAACGCAAGTGCAGAACT +
Preference number: 5 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGTIMPL*KRKCRT
Trigger: AGTTCTGCACTTGCGTTTCAATAATGGCATGATGGT...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTCACTGGGCACTGGGCTaGAAGCTGCATCCCCCATAC +
Preference number: 5 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAHWALG*KLHPPY
Trigger: GTATGGGGGATGCAGCTTCAAGCCCAGTGCCCAGTG...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTTGCCACAGGGTCACTaGCAGCAAAGGCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: FHLKPGSHHHALLISLFSLPQGH*QQRPGA
Trigger: AGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAA...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCGAAGCAGAAGGAAGGTaGTGCAGTGCAAGGTTGACA +
Preference number: 5 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVEAEGR*CSARLT
Trigger: TGTCAACCTTGCACTGCACAACCTTCCTTCTGCTTC...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAACTGAAGCCCACTAGCTaGGCAGCTCACACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQLKPTS*AAHTAA
Trigger: GGCAGCTGTGTGAGCTGCCAAGCTAGTGGGCTTCAG...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAGTGGCACAGGTACCCTaGCACCTGAAGCCCACTAGC +
Preference number: 5 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQVAQVP*HLKPTS
Trigger: GCTAGTGGGCTTCAGGTGCAAGGGTACCTGTGCCAC...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTCTGTGTGCTCCCAGGTaGGTGTGGCACAGGTACCCT +
Preference number: 5 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVLCAPR*VWHRYP
Trigger: AGGGTACCTGTGCCACACCAACCTGGGAGCACACAG...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTGAAGAGGATACCTTCTaGCCTGGGGAGACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: DTFLPGETSWVHINSILCEEDTF*PGETSW
Trigger: CCAGCTGGTCTCCCCAGGCAAGAAGGTATCCTCTTC...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTCTATTGGGCAATATTTaGAGACAGCTCGAAACCCAT +
Preference number: 5 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGLLGNI*RQLETH
Trigger: ATGGGTTTCGAGCTGTCTCAAAATATTGCCCAATAG...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCCTTTCCGATACTATGTaGACACTGTGGTTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCLSDTM*TLWLKE
Trigger: CTCCTTTAACCACAGTGTCAACATAGTATCGGAAAG...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCAAGCTGTTAGTTTCCTaGGTGCCCAGAGGGCTAACA +
Preference number: 5 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVKLLVS*VPRGLT
Trigger: TGTTAGCCCTCTGGGCACCAAGGAAACTAACAGCTT...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTGTTTATGTGCCCATGTaGGTAATGACACATTTGGGA +
Preference number: 5 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTVYVPM*VMTHLG
Trigger: TCCCAAATGTGTCATTACCAACATGGGCACATAAAC...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGCATCATCATGCTCTTTaGATTTCTCTCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLHHHAL*ISLFSS
Trigger: GGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATG...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCGGGCTGCACTAATCTGGGTTGGACTGCTCTGCTACAGACTGGAGGGTGTTGCCCACTGACTATCCTCTaGTTATCAAATCGAATACAA +
Preference number: 5 (lower is better)
Translates to: PGCTNLGWTALLQTGGCCPLTIL*LSNRIQ
Trigger: TTGTATTCGATTTGATAACAAGAGGATAGTCAGTGG...GCAACACCCTCCAGTCTGTAGCAGAGCAGTCCAACCCAGATTAGTGCAGCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTTGTGTTTTCTTTTTCTaGTCCCAGAGGCTATACAGA +
Preference number: 5 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTCVFFF*SQRLYR
Trigger: TCTGTATAGCCTCTGGGACAAGAAAAAGAAAACACA...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGTGGCACAGGTACCCTaGCACCTGAAGCCCACTAGC +
Preference number: 5 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRVAQVP*HLKPTS
Trigger: GCTAGTGGGCTTCAGGTGCAAGGGTACCTGTGCCAC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGAGGAGAGAGGACAACTaGGAGAATATCCTCAACTGG +
Preference number: 5 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWRREDN*ENILNW
Trigger: CCAGTTGAGGATATTCTCCAAGTTGTCCTCTCTCCT...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GAGGGAACTCTGTCTCCTCCTAAGCATATTGGGGCTGGGCTGCTCTGGCCAGGTTTTATTCTAGCCCAGTaGGGGATTAGTGATAATCAA +
Preference number: 5 (lower is better)
Translates to: EGTLSPPKHIGAGLLWPGFILAQ*GISDNQ
Trigger: TTGATTATCACTAATCCCCAACTGGGCTAGAATAAA...ACCTGGCCAGAGCAGCCCAGCCCCAATATGCTTAGGAGGAGACAGAGTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTCCTCCTCATCTGCCTTaGAAGGGGTTTCAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVPPHLP*KGFQPV
Trigger: GACAGGCTGAAACCCCTTCAAAGGCAGATGAGGAGG...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCACAGACTGGAGGGTGTaGCCATCTAAGGCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: FHTLHGIKETAESRKDAATDWRV*PSKAKG
Trigger: CCCTTTTGCCTTAGATGGCAACACCCTCCAGTCTGT...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGGGAAGCTTACATGTGTaGTTAGGCCTGTCCCATCAT +
Preference number: 5 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWGSLHV*LGLSHH
Trigger: ATGATGGGACAGGCCTAACAACACATGTAAGCTTCC...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCACAGATCTTGATTGTGTaGTCTCGAAGGCCGCTTACT +
Preference number: 5 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPQILIV*SRRPLT
Trigger: AGTAAGCGGCCTTCGAGACAACACAATCAAGATCTG...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTCCACTGACTATCCTCTaGTTATCAAATCGAATACAA +
Preference number: 5 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTPLTIL*LSNRIQ
Trigger: TTGTATTCGATTTGATAACAAGAGGATAGTCAGTGG...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TGTCTGAGAATCCACTGTTGCCACAGGGTCACTTGCAGCAAAGGCCTGGGGCTGATTTATAAGTCACCTTaGTCTGGAACCAATGGGAAA +
Preference number: 5 (lower is better)
Translates to: CLRIHCCHRVTCSKGLGLIYKSP*SGTNGK
Trigger: TTTCCCATTGGTTCCAGACAAAGGTGACTTATAAAT...CAGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGAATGCACCAAGCGATaGGCTCTGGCCATTTCAAAT +
Preference number: 5 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPECTKR*ALAISN
Trigger: ATTTGAAATGGCCAGAGCCAATCGCTTGGTGCATTC...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACCTGAAGCCCACTAGCTaGGCAGCTCACACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHLKPTS*AAHTAA
Trigger: GGCAGCTGTGTGAGCTGCCAAGCTAGTGGGCTTCAG...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTGAAGCAGTCAGTTGTGCTGAGTAGACCGTCCTGGGCCGACTGCAGACCAACTTTTATTCTAGCCCAGTaGGGGATTAGTGATAATCAA +
Preference number: 5 (lower is better)
Translates to: LKQSVVLSRPSWADCRPTFILAQ*GISDNQ
Trigger: TTGATTATCACTAATCCCCAACTGGGCTAGAATAAA...AGTTGGTCTGCAGTCGGCCCAGGACGGTCTACTCAGCACAACTGACTGCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTACAGACTGGAGGGTGTaGCCATCTAAGGCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVTDWRV*PSKAKG
Trigger: CCCTTTTGCCTTAGATGGCAACACCCTCCAGTCTGT...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGGAAGCTTACATGTGTaGTTAGGCCTGTCCCATCAT +
Preference number: 5 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPGSLHV*LGLSHH
Trigger: ATGATGGGACAGGCCTAACAACACATGTAAGCTTCC...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGTTTCCTTTTCATAGCTaGCTGAGAGTTTCCGTTGCT +
Preference number: 5 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWFPFHS*LRVSVA
Trigger: AGCAACGGAAACTCTCAGCAAGCTATGAAAAGGAAA...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCAGTGTGCACCAAAAGGTCTTTTTATCCCAGATCTaGATTGTGTTGTCTCGAAGG +
Preference number: 5 (lower is better)
Translates to: CSKACWSCPSSSSVHQKVFLSQI*IVLSRR
Trigger: CCTTCGAGACAACACAATCAAGATCTGGGATAAAAA...GACCTTTTGGTGCACACTGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GAGGTCCAGCTGTTTATGCTGTTCACCAATCGCCACAGACGCTTTATTGGCTGGACCATCATGCCATTATaGAAACGCAAGTGCAGAACT +
Preference number: 5 (lower is better)
Translates to: EVQLFMLFTNRHRRFIGWTIMPL*KRKCRT
Trigger: AGTTCTGCACTTGCGTTTCAATAATGGCATGATGGT...CCAGCCAATAAAGCGTCTGTGGCGATTGGTGAACAGCATAAACAGCTGGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCCAGGCAATGCCTCGTTaGTGTCCATTTAAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: FHTLHGIKETAESRKDAAQAMPR*CPFKVL
Trigger: AAGGACCTTAAATGGACACAAACGAGGCATTGCCTG...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTACCTTGATCACGGTCTaGGCAAAGATACAGGCACCT +
Preference number: 5 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLTLITV*AKIQAP
Trigger: AGGTGCCTGTATCTTTGCCAAGACCGTGATCAAGGT...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCACCTTGATCACGGTCTaGGCAAAGATACAGGCACCT +
Preference number: 5 (lower is better)
Translates to: FHLKPGSHHHALLISLFSTLITV*AKIQAP
Trigger: AGGTGCCTGTATCTTTGCCAAGACCGTGATCAAGGT...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCAACTGAACCTAGATaGGAGAGCAAAACCCTGGGC +
Preference number: 5 (lower is better)
Translates to: FHLKPGSHHHALLISLFSSTEPR*ESKTLG
Trigger: GCCCAGGGTTTTGCTCTCCAATCTAGGTTCAGTTGA...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAATCAACTGAACCTAGATaGGAGAGCAAAACCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKSTEPR*ESKTLG
Trigger: GCCCAGGGTTTTGCTCTCCAATCTAGGTTCAGTTGA...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCAGGAGAGAGGACAACTaGGAGAATATCCTCAACTGG +
Preference number: 5 (lower is better)
Translates to: FHTLHGIKETAESRKDAARREDN*ENILNW
Trigger: CCAGTTGAGGATATTCTCCAAGTTGTCCTCTCTCCT...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGCGCCAGCTGTGCTGGTaGGAAAGCACATATTTTAGA +
Preference number: 5 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLRQLCW*ESTYFR
Trigger: TCTAAAATATGTGCTTTCCAACCAGCACAGCTGGCG...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTCGCCAGCTGTGCTGGTaGGAAAGCACATATTTTAGA +
Preference number: 5 (lower is better)
Translates to: DTFLPGETSWVHINSILCRQLCW*ESTYFR
Trigger: TCTAAAATATGTGCTTTCCAACCAGCACAGCTGGCG...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTAAGCTGTTAGTTTCCTaGGTGCCCAGAGGGCTAACA +
Preference number: 5 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVKLLVS*VPRGLT
Trigger: TGTTAGCCCTCTGGGCACCAAGGAAACTAACAGCTT...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCCAGATCTTGATTGTGTaGTCTCGAAGGCCGCTTACT +
Preference number: 5 (lower is better)
Translates to: FHLKPGSHHHALLISLFSQILIV*SRRPLT
Trigger: AGTAAGCGGCCTTCGAGACAACACAATCAAGATCTG...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAACAGGCAATGCCTCGTTaGTGTCCATTTAAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQQAMPR*CPFKVL
Trigger: AAGGACCTTAAATGGACACAAACGAGGCATTGCCTG...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTGAATGCACCAAGCGATaGGCTCTGGCCATTTCAAAT +
Preference number: 5 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLECTKR*ALAISN
Trigger: ATTTGAAATGGCCAGAGCCAATCGCTTGGTGCATTC...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGAATGCACCAAGCGATaGGCTCTGGCCATTTCAAAT +
Preference number: 5 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAECTKR*ALAISN
Trigger: ATTTGAAATGGCCAGAGCCAATCGCTTGGTGCATTC...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTTTCAGTGGGTACACCTaGGGAAGAGGATACCTTCTT +
Preference number: 5 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSFSGYT*GRGYLL
Trigger: AAGAAGGTATCCTCTTCCCAAGGTGTACCCACTGAA...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGAGGAGGTCTGGTCTGTaGGTGAACAACTGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRRRSGL*VNNCVE
Trigger: CTCCACACAGTTGTTCACCAACAGACCAGACCTCCT...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAACGCCAGCTGTGCTGGTaGGAAAGCACATATTTTAGA +
Preference number: 5 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQRQLCW*ESTYFR
Trigger: TCTAAAATATGTGCTTTCCAACCAGCACAGCTGGCG...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTAGTCTGGCACAGCTGTaGTATGTCTGTCTAAGTGAA +
Preference number: 5 (lower is better)
Translates to: NLQWGHLQLCFYHSLECASLAQL*YVCLSE
Trigger: TTCACTTAGACAGACATACAACAGCTGTGCCAGACT...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370187.8
ENST00000408038.6
CDS-3UTR CAA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGTTGGCAAGTTTTGTTTaGGCCACACAATTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLLASFV*ATQFSV
Trigger: GACTGAGAATTGTGTGGCCAAAACAAAACTTGCCAA...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGAGTAAACTCCTTTGCTaGTTTCACTTCGGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLSKLLC*FHFGSE
Trigger: TTCACTGCCGAAGTGAAACAAGCAAAGGAGTTTACT...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AGTGAAATACACACACGTGCAGCAAGGCATGCTGGTCTTGTCCAAGTAGCTCCATTTTTATCCCAGATCTaGATTGTGTTGTCTCGAAGG +
Preference number: 5 (lower is better)
Translates to: SEIHTRAARHAGLVQVAPFLSQI*IVLSRR
Trigger: CCTTCGAGACAACACAATCAAGATCTGGGATAAAAA...TGGAGCTACTTGGACAAGACCAGCATGCCTTGCTGCACGTGTGTGTATTTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTTGCCACAGGGTCACTaGCAGCAAAGGCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: LFITHPIVNERKCNQQLLLPQGH*QQRPGA
Trigger: AGCCCCAGGCCTTTGCTGCAAGTGACCCTGTGGCAA...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTCCACCAATCCTCCTCTaGGGTGTGGGGAAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVPPILL*GVGKKE
Trigger: CTCTTTCTTCCCCACACCCAAGAGGAGGATTGGTGG...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGAAGCAGAAGGAAGGTaGTGCAGTGCAAGGTTGACA +
Preference number: 5 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMREAEGR*CSARLT
Trigger: TGTCAACCTTGCACTGCACAACCTTCCTTCTGCTTC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCGTGGCACAGGTACCCTaGCACCTGAAGCCCACTAGC +
Preference number: 5 (lower is better)
Translates to: KCERFKFFRPLNFIPISIVAQVP*HLKPTS
Trigger: GCTAGTGGGCTTCAGGTGCAAGGGTACCTGTGCCAC...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTCCACCCCTCCCACCTTaGTTTCCCCACACAATCAAG +
Preference number: 5 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVPPLPP*FPHTIK
Trigger: CTTGATTGTGTGGGGAAACAAAGGTGGGAGGGGTGG...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCCTTTCCGATACTATGTaGACACTGTGGTTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: FHTLHGIKETAESRKDAALSDTM*TLWLKE
Trigger: CTCCTTTAACCACAGTGTCAACATAGTATCGGAAAG...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCGAGGAATTCATAAACTaGAGTGCCTTCTCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: FHLKPGSHHHALLISLFSEEFIN*SAFSCS
Trigger: GCTGCAAGAGAAGGCACTCAAGTTTATGAATTCCTC...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408038.6
CDS-3UTR CAA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTTTGGCAAGTTTTGTTTaGGCCACACAATTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSLASFV*ATQFSV
Trigger: GACTGAGAATTGTGTGGCCAAAACAAAACTTGCCAA...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTTGGCAAGTTTTGTTTaGGCCACACAATTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: FHLKPGSHHHALLISLFSLASFV*ATQFSV
Trigger: GACTGAGAATTGTGTGGCCAAAACAAAACTTGCCAA...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTTGCCATTGGCAAGTTTaGTTTTGGCCACACAATTCT +
Preference number: 5 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVCHWQV*FWPHNS
Trigger: AGAATTGTGTGGCCAAAACAAAACTTGCCAATGGCA...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTTTTCCTTTTCATAGCTaGCTGAGAGTTTCCGTTGCT +
Preference number: 5 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSFPFHS*LRVSVA
Trigger: AGCAACGGAAACTCTCAGCAAGCTATGAAAAGGAAA...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTCACTGCTCAAAGTATTaGACACACAGTTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAHCSKY*THSSFS
Trigger: GGAAAAGGAACTGTGTGTCAAATACTTTGAGCAGTG...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTGTTTATGTGCCCATGTaGGTAATGACACATTTGGGA +
Preference number: 5 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSVYVPM*VMTHLG
Trigger: TCCCAAATGTGTCATTACCAACATGGGCACATAAAC...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAAAGTAAACTCCTTTGCTaGTTTCACTTCGGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKSKLLC*FHFGSE
Trigger: TTCACTGCCGAAGTGAAACAAGCAAAGGAGTTTACT...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTCCACACTCTACATGGAATCAAGGAGACTGCTGAGTCCAGAAAAGATGCAGCCCCTGTGAGAATTCGCTaGCATTCCAATGTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: FHTLHGIKETAESRKDAAPVRIR*HSNVFL
Trigger: TAAAAACACATTGGAATGCAAGCGAATTCTCACAGG...GGCTGCATCTTTTCTGGACTCAGCAGTCTCCTTGATTCCATGTAGAGTGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GATACCTTCTTGCCTGGGGAGACCAGCTGGGTGCACATTAATAGTATTCTGTGTCCTGTGAGAATTCGCTaGCATTCCAATGTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: DTFLPGETSWVHINSILCPVRIR*HSNVFL
Trigger: TAAAAACACATTGGAATGCAAGCGAATTCTCACAGG...ACACAGAATACTATTAATGTGCACCCAGCTGGTCTCCCCAGGCAAGAAGGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAACCATCATGCCATTATaGAAACGCAAGTGCAGAACT +
Preference number: 5 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQTIMPL*KRKCRT
Trigger: AGTTCTGCACTTGCGTTTCAATAATGGCATGATGGT...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGTGTGTTTTCTTTTTCTaGTCCCAGAGGCTATACAGA +
Preference number: 5 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLCVFFF*SQRLYR
Trigger: TCTGTATAGCCTCTGGGACAAGAAAAAGAAAACACA...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAACTATTGGGCAATATTTaGAGACAGCTCGAAACCCAT +
Preference number: 5 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKLLGNI*RQLETH
Trigger: ATGGGTTTCGAGCTGTCTCAAAATATTGCCCAATAG...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACTCAACTGAACCTAGATaGGAGAGCAAAACCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHSTEPR*ESKTLG
Trigger: GCCCAGGGTTTTGCTCTCCAATCTAGGTTCAGTTGA...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCTTTCCGATACTATGTaGACACTGTGGTTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLLSDTM*TLWLKE
Trigger: CTCCTTTAACCACAGTGTCAACATAGTATCGGAAAG...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCATCATCATGCTCTTTaGATTTCTCTCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLHHHAL*ISLFSS
Trigger: GGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATG...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACAGTCTGGCACAGCTGTaGTATGTCTGGAAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHSLAQL*YVWKAV
Trigger: CACAGCTTTCCAGACATACAACAGCTGTGCCAGACT...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393441.8
CDS-3UTR CAA 90 bp CACTTGCAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCTGTGAGAATTCGCTaGCATTCCAATGTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: HLQQRPGAEIFTEQHLTLPVRIR*HSNVFL
Trigger: TAAAAACACATTGGAATGCAAGCGAATTCTCACAGG...AAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTGCAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTGACCTGTGTGTTTTTCAGGGCTGACAGCCCTCTACCTTCATCTATAGCAAAAAAACTGGGCAGTAGTTaGATTGTTACTGTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: LTCVFFRADSPLPSSIAKKLGSS*IVTVVA
Trigger: AGCAACAACAGTAACAATCAAACTACTGCCCAGTTT...TTTTGCTATAGATGAAGGTAGAGGGCTGTCAGCCCTGAAAAACACACAGGTCAG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAAAAACTGGGCAGTAGTTaGATTGTTACTGTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQKLGSS*IVTVVA
Trigger: AGCAACAACAGTAACAATCAAACTACTGCCCAGTTT...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTAAACTGGGCAGTAGTTaGATTGTTACTGTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAKLGSS*IVTVVA
Trigger: AGCAACAACAGTAACAATCAAACTACTGCCCAGTTT...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACTTCAGTGGGTACACCTaGGGAAGAGGATACCTTCTT +
Preference number: 5 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHFSGYT*GRGYLL
Trigger: AAGAAGGTATCCTCTTCCCAAGGTGTACCCACTGAA...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACAGGAGAGAGGACAACTaGGAGAATATCCTCAACTGG +
Preference number: 5 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHRREDN*ENILNW
Trigger: CCAGTTGAGGATATTCTCCAAGTTGTCCTCTCTCCT...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCCCTCCTCATCTGCCTTaGAAGGGGTTTCAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: KCERFKFFRPLNFIPISIPPHLP*KGFQPV
Trigger: GACAGGCTGAAACCCCTTCAAAGGCAGATGAGGAGG...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp ATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTGTCACATCCTTTCAAATaGCACACCAAGTTAAAGGAT +
Preference number: 5 (lower is better)
Translates to: IYNGDTFSSVSTTPWNVLSHPFK*HTKLKD
Trigger: ATCCTTTAACTTGGTGTGCAATTTGAAAGGATGTGA...CAGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTAAGCTGTTAGTTTCCTaGGTGCCCAGAGGGCTAACA +
Preference number: 5 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVKLLVS*VPRGLT
Trigger: TGTTAGCCCTCTGGGCACCAAGGAAACTAACAGCTT...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS CCA 90 bp CCGTCTCCTACCCACAGTGTTATGTACATAATCGATTTCGATACCTaGGCAAGTATGAGGTCAGTGTATGGTTATTTATCTGGAGATGTA +
Preference number: 5 (lower is better)
Translates to: PSPTHSVMYIIDFDT*ASMRSVYGYLSGDV
Trigger: TACATCTCCAGATAAATAACCATACACTGACCTCATACTTGCCCAGGTATCGAAATCGATTATGTACATAACACTGTGGGTAGGAGACGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493877.1
CDS-3UTR CAA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGGTTTATGTGCCCATGTaGGTAATGACACATTTGGGA +
Preference number: 5 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRVYVPM*VMTHLG
Trigger: TCCCAAATGTGTCATTACCAACATGGGCACATAAAC...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTGCAGCACATAGTGATTaGGCATCCAGGTATGACAGA +
Preference number: 5 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVAAHSD*ASRYDR
Trigger: TCTGTCATACCTGGATGCCAAATCACTATGTGCTGC...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCCAATTCCCGTCAGGAGGTTaGTTTTTGAATAAATACTGT +
Preference number: 5 (lower is better)
Translates to: PETRQPSSCSFDFSLQLQFPSGG*FLNKYC
Trigger: ACAGTATTTATTCAAAAACAAACCTCCTGACGGGAA...TTGGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTTTCCCGTCAGGAGGTTaGTTTTTGAATAAATACTGT +
Preference number: 5 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSFPSGG*FLNKYC
Trigger: ACAGTATTTATTCAAAAACAAACCTCCTGACGGGAA...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCCCACTGACTATCCTCTaGTTATCAAATCGAATACAA +
Preference number: 5 (lower is better)
Translates to: FHLKPGSHHHALLISLFSPLTIL*LSNRIQ
Trigger: TTGTATTCGATTTGATAACAAGAGGATAGTCAGTGG...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp GGCTCTCTTTCCGATACTATGTTGACACTGTGGTTAAAGGAGGTCTGGTCTGTTATTTATAAGTCACCTTaGTCTGGAACCAATGGGAAA +
Preference number: 5 (lower is better)
Translates to: GSLSDTMLTLWLKEVWSVIYKSP*SGTNGK
Trigger: TTTCCCATTGGTTCCAGACAAAGGTGACTTATAAAT...AACAGACCAGACCTCCTTTAACCACAGTGTCAACATAGTATCGGAAAGAGAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AATCTACAATGGGGACACCTTCAGCTCTGTTTCTACCACTCCTTGGAATGTGCTATTTATAAGTCACCTTaGTCTGGAACCAATGGGAAA +
Preference number: 5 (lower is better)
Translates to: NLQWGHLQLCFYHSLECAIYKSP*SGTNGK
Trigger: TTTCCCATTGGTTCCAGACAAAGGTGACTTATAAAT...AGCACATTCCAAGGAGTGGTAGAAACAGAGCTGAAGGTGTCCCCATTGTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCTGAGAATCCACTGTaGCCACAGGGTCACTTGCAG +
Preference number: 5 (lower is better)
Translates to: LFITHPIVNERKCNQQLLSENPL*PQGHLQ
Trigger: CTGCAAGTGACCCTGTGGCAACAGTGGATTCTCAGA...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CAGCAAAGGCCTGGGGCTGAAATCTTCACTGAACAGCATTTAACTCTTCCAAGTTTTATTCTAGCCCAGTaGGGGATTAGTGATAATCAA +
Preference number: 5 (lower is better)
Translates to: QQRPGAEIFTEQHLTLPSFILAQ*GISDNQ
Trigger: TTGATTATCACTAATCCCCAACTGGGCTAGAATAAA...ACTTGGAAGAGTTAAATGCTGTTCAGTGAAGATTTCAGCCCCAGGCCTTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTCCACCTGAAACCAGGCAGCCATCATCATGCTCTTTTGATTTCTCTCTTCAGCTCACATCCTTTCAAATaGCACACCAAGTTAAAGGAT +
Preference number: 5 (lower is better)
Translates to: FHLKPGSHHHALLISLFSSHPFK*HTKLKD
Trigger: ATCCTTTAACTTGGTGTGCAATTTGAAAGGATGTGA...GCTGAAGAGAGAAATCAAAAGAGCATGATGATGGCTGCCTGGTTTCAGGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCGAAGCAGAAGGAAGGTaGTGCAGTGCAAGGTTGACA +
Preference number: 5 (lower is better)
Translates to: KCERFKFFRPLNFIPISIEAEGR*CSARLT
Trigger: TGTCAACCTTGCACTGCACAACCTTCCTTCTGCTTC...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGACACCAGAAAGAATTTaGCCAAGGGACATGTACAAA +
Preference number: 5 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRTPERI*PRDMYK
Trigger: TTTGTACATGTCCCTTGGCAAAATTCTTTCTGGTGT...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTCCACACCATCATCATGCTCTTTaGATTTCTCTCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LHTQLLMRGNAISNSFPHHHHAL*ISLFSS
Trigger: GGAGCTGAAGAGAGAAATCAAAAGAGCATGATGATG...GTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTTGCCATTGGCAAGTTTaGTTTTGGCCACACAATTCT +
Preference number: 5 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVCHWQV*FWPHNS
Trigger: AGAATTGTGTGGCCAAAACAAAACTTGCCAATGGCA...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTCACTGCTCAAAGTATTaGACACACAGTTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVHCSKY*THSSFS
Trigger: GGAAAAGGAACTGTGTGTCAAATACTTTGAGCAGTG...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTCTATTGGGCAATATTTaGAGACAGCTCGAAACCCAT +
Preference number: 5 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVLLGNI*RQLETH
Trigger: ATGGGTTTCGAGCTGTCTCAAAATATTGCCCAATAG...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CAGAATGATGTAGGGGTCTCACAGACTTTTCTAGTTCGGAAACAAGTTATGAGGTCACATCCTTTCAAATaGCACACCAAGTTAAAGGAT +
Preference number: 5 (lower is better)
Translates to: QNDVGVSQTFLVRKQVMRSHPFK*HTKLKD
Trigger: ATCCTTTAACTTGGTGTGCAATTTGAAAGGATGTGA...CCTCATAACTTGTTTCCGAACTAGAAAAGTCTGTGAGACCCCTACATCATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp TCATTCACAAAAGATAGAAGACATCTTCTGATAGCAGCACTGAAGCAGTCAGTTTTCCCGTCAGGAGGTTaGTTTTTGAATAAATACTGT +
Preference number: 5 (lower is better)
Translates to: SFTKDRRHLLIAALKQSVFPSGG*FLNKYC
Trigger: ACAGTATTTATTCAAAAACAAACCTCCTGACGGGAA...AACTGACTGCTTCAGTGCTGCTATCAGAAGATGTCTTCTATCTTTTGTGAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTAGTAAACTCCTTTGCTaGTTTCACTTCGGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: LFITHPIVNERKCNQQLLSKLLC*FHFGSE
Trigger: TTCACTGCCGAAGTGAAACAAGCAAAGGAGTTTACT...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTTGCTCATCCTGGTATaGGCAGATACGTTAAATACC +
Preference number: 5 (lower is better)
Translates to: LFITHPIVNERKCNQQLLLLILV*ADTLNT
Trigger: GGTATTTAACGTATCTGCCAATACCAGGATGAGCAA...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp CTTTTTATTACACACCCAATTGTTAATGAGAGGAAATGCAATCAGCAACTCCTTTTTTTATCCCAGATCTaGATTGTGTTGTCTCGAAGG +
Preference number: 5 (lower is better)
Translates to: LFITHPIVNERKCNQQLLFLSQI*IVLSRR
Trigger: CCTTCGAGACAACACAATCAAGATCTGGGATAAAAA...AAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTGGGTGTGTAATAAAAAG
37% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS-3UTR CAA 90 bp AAATGTGAACGATTCAAGTTTTTCAGACCACTTAACTTCATTCCCATTTCCATCTGTGTTTTCTTTTTCTaGTCCCAGAGGCTATACAGA +
Preference number: 5 (lower is better)
Translates to: KCERFKFFRPLNFIPISICVFFF*SQRLYR
Trigger: TCTGTATAGCCTCTGGGACAAGAAAAAGAAAACACA...GATGGAAATGGGAATGAAGTTAAGTGGTCTGAAAAACTTGAATCGTTCACATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS GCA 72 bp CACTGGGTCCGCTCTCCGCCGGGGCCGCCCCTTTGGTaGCAGGCCGCAGCCAACGCAGCGCCCGGATCCCGC +
Preference number: 6 (lower is better)
Translates to: HWVRSPPGPPLW*QAAANAAPGSR
Trigger: GCGGGATCCGGGCGCTGCGTTGGCTGCGGCCTGGCACCAAAGGGGCGGCCCCGGCGGAGAGCGGACCCAGTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393441.8
ENST00000475200.5
CDS CCA 72 bp GGCCACTGGGTCCGCTCTCCGCCGGGGCCGCCCCTTTaGTGCCAGGCCGCAGCCAACGCAGCGCCCGGATCC +
Preference number: 6 (lower is better)
Translates to: GHWVRSPPGPPL*CQAAANAAPGS
Trigger: GGATCCGGGCGCTGCGTTGGCTGCGGCCTGGCACCAAAGGGGCGGCCCCGGCGGAGAGCGGACCCAGTGGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393441.8
ENST00000475200.5
CDS CAA 72 bp AGGCCACTGGGTCCGCTCTCCGCCGGGGCCGCCCCTTaGGTGCCAGGCCGCAGCCAACGCAGCGCCCGGATC +
Preference number: 6 (lower is better)
Translates to: RPLGPLSAGAAP*VPGRSQRSARI
Trigger: GATCCGGGCGCTGCGTTGGCTGCGGCCTGGCACCAAAGGGGCGGCCCCGGCGGAGAGCGGACCCAGTGGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393441.8
ENST00000475200.5
CDS CCA 72 bp CACCGCCTCGGCCGGGTCCATAATCGCCGAGGCCACTaGGTCCGCTCTCCGCCGGGGCCGCCCCTTTGGTGC +
Preference number: 6 (lower is better)
Translates to: HRLGRVHNRRGH*VRSPPGPPLWC
Trigger: GCACCAAAGGGGCGGCCCCGGCGGAGAGCGGACCCAGTGGCCTCGGCGATTATGGACCCGGCCGAGGCGGTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393441.8
ENST00000408038.6
ENST00000475200.5
CDS GCA 72 bp CTGGGCATAGAGCACATAAACTTGAGTGCCTTCTCTTaGAGCACCGCCTCGGCCGGGTCCATAATCGCCGAG +
Preference number: 6 (lower is better)
Translates to: LGIEHINLSAFS*STASAGSIIAE
Trigger: CTCGGCGATTATGGACCCGGCCGAGGCGGTGCTGCAAGAGAAGGCACTCAAGTTTATGTGCTCTATGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000475200.5
CDS GCA 72 bp CTCTCTGAGGAATTCATAAACTTGAGTGCCTTCTCTTaGAGCACCGCCTCGGCCGGGTCCATAATCGCCGAG +
Preference number: 6 (lower is better)
Translates to: LSEEFINLSAFS*STASAGSIIAE
Trigger: CTCGGCGATTATGGACCCGGCCGAGGCGGTGCTGCAAGAGAAGGCACTCAAGTTTATGAATTCCTCAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408038.6
CDS CCA 72 bp GTTGTATGTCTGGAAAGCTGTGAGTGCGCCAGTCCCTaGGTTATACAGGCATCGCAGCGAAGGCATGCTGTC +
Preference number: 6 (lower is better)
Translates to: VVCLESCECASP*VIQASQRRHAV
Trigger: GACAGCATGCCTTCGCTGCGATGCCTGTATAACCCAGGGACTGGCGCACTCACAGCTTTCCAGACATACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393441.8
CDS CCA 72 bp GAAAGTAAGCTGGAAAGCTGTGAGTGCGCCAGTCCCTaGGTTATACAGGCATCGCAGCGAAGGCATGCTGTC +
Preference number: 6 (lower is better)
Translates to: ESKLESCECASP*VIQASQRRHAV
Trigger: GACAGCATGCCTTCGCTGCGATGCCTGTATAACCCAGGGACTGGCGCACTCACAGCTTTCCAGCTTACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475200.5
CDS CAA 72 bp CTGTCCACACTGTGGCAGCTTCAGCCCTGTCTCACATaGTCTGCTTCCTCGGCTTTACAGGAGTTGGTGACC +
Preference number: 6 (lower is better)
Translates to: LSTLWQLQPCLT*SASSALQELVT
Trigger: GGTCACCAACTCCTGTAAAGCCGAGGAAGCAGACAATGTGAGACAGGGCTGAAGCTGCCACAGTGTGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493877.1
CDS CAA 72 bp TGTCTCACATTGTCTGCTTCCTCGGCTTTACAGGAGTaGGTGACCCAAACGGCAGGAGAAAGTTCCATGAAC +
Preference number: 6 (lower is better)
Translates to: CLTLSASSALQE*VTQTAGESSMN
Trigger: GTTCATGGAACTTTCTCCTGCCGTTTGGGTCACCAACTCCTGTAAAGCCGAGGAAGCAGACAATGTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493877.1
CDS GCA 72 bp ACAGCATGCCATCAGAGGTCACTCGGTACCATTCCTTaGACACAAGTTCAGCAGCACATAGTGATTTGGCAT +
Preference number: 6 (lower is better)
Translates to: TACHQRSLGTIP*TQVQQHIVIWH
Trigger: ATGCCAAATCACTATGTGCTGCTGAACTTGTGTGCAAGGAATGGTACCGAGTGACCTCTGATGGCATGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
ENST00000465182.1
CDS GCA 72 bp AATCCCCGAGCTGGCAGAGCAGTTATGAAATCTCTCTaGAACATAGGTTTAAGATACGAGTTTATGTGCCCA +
Preference number: 6 (lower is better)
Translates to: NPRAGRAVMKSL*NIGLRYEFMCP
Trigger: TGGGCACATAAACTCGTATCTTAAACCTATGTTGCAGAGAGATTTCATAACTGCTCTGCCAGCTCGGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370183.2
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
ENST00000465182.1
CDS CAA 72 bp CAGAGGACTGAACCTGTATGGCCTGTGAGAATTCGCTaGCATTCCAATGTGTTTTTATCCCAGATCTTGATT +
Preference number: 6 (lower is better)
Translates to: QRTEPVWPVRIR*HSNVFLSQILI
Trigger: AATCAAGATCTGGGATAAAAACACATTGGAATGCAAGCGAATTCTCACAGGCCATACAGGTTCAGTCCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6
CDS CCA 72 bp ACCCACAGTGTTATGTACATAATCGATTTCGATACCTaGGCAAGTATGAGGTCAGTGTATGGTTATTTATCT +
Preference number: 6 (lower is better)
Translates to: THSVMYIIDFDT*ASMRSVYGYLS
Trigger: AGATAAATAACCATACACTGACCTCATACTTGCCCAGGTATCGAAATCGATTATGTACATAACACTGTGGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493877.1
CDS TCA 72 bp TTATTGAAACGCAAGTGCAGAACTGCTTCACAATGGTaGATCAACGTGTTTAGCATTTCACCTGTATTTACA +
Preference number: 6 (lower is better)
Translates to: LLKRKCRTASQW*INVFSISPVFT
Trigger: TGTAAATACAGGTGAAATGCTAAACACGTTGATTCACCATTGTGAAGCAGTTCTGCACTTGCGTTTCAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370187.8
ENST00000393441.8
ENST00000408038.6