RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BTNL9 (Homo sapiens)

Ensembl gene IDs: ENSG00000165810

Ensembl transcript IDs: ENST00000327705.14, ENST00000376841.6, ENST00000491209.5, ENST00000506782.1, ENST00000509395.1, ENST00000511056.1, ENST00000511589.1, ENST00000512570.1, ENST00000513424.1, ENST00000515271.1

Found 402 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTCACGTAACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTaGCCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCG +
Preference number: 1 (lower is better)
Translates to: PHVTGLFSRCLTAAS*PCAEMLRIRPTPCA
Trigger: CGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTTACGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR CCA 90 bp GCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTaGCGCTGGCAGCAGAGACCCTGGTCACCGCTCCCTCTGTACAGT +
Preference number: 1 (lower is better)
Translates to: AHPPDSLCAMKTWTR*RWQQRPWSPLPLYS
Trigger: ACTGTACAGAGGGAGCGGTGACCAGGGTCTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR GCA 90 bp TTCCTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTaGGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGAGACCC +
Preference number: 1 (lower is better)
Translates to: FLTLCGDVAHPPDSL*AMKTWTRWRWQQRP
Trigger: GGGTCTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR CCA 90 bp CCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTaGCAGCAGAGACCCTGGTCACCGCTCCCTCTGTACAGTGTGATG +
Preference number: 1 (lower is better)
Translates to: PPDSLCAMKTWTRWR*QQRPWSPLPLYSVM
Trigger: CATCACACTGTACAGAGGGAGCGGTGACCAGGGTCTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR CCA 90 bp CTACGTAGGCAAAGGTCCCTCTCTTTGTCCCCCTCGCTGACATTTTaGCTGGTGCACCTGCTCCCTTCAGACGGAGCAGGAGAGCAAAGC +
Preference number: 1 (lower is better)
Translates to: LRRQRSLSLSPSLTF*LVHLLPSDGAGEQS
Trigger: GCTTTGCTCTCCTGCTCCGTCTGAAGGGAGCAGGTGCACCAGCCAAAATGTCAGCGAGGGGGACAAAGAGAGGGACCTTTGCCTACGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR TCA 90 bp ATACACATCTACGTAGGCAAAGGTCCCTCTCTTTGTCCCCCTCGCTaGCATTTTGGCTGGTGCACCTGCTCCCTTCAGACGGAGCAGGAG +
Preference number: 1 (lower is better)
Translates to: IHIYVGKGPSLCPPR*HFGWCTCSLQTEQE
Trigger: CTCCTGCTCCGTCTGAAGGGAGCAGGTGCACCAGCCAAAATGTCAGCGAGGGGGACAAAGAGAGGGACCTTTGCCTACGTAGATGTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR CCA 90 bp TCTCTCCTGTCATTATTCATCCTGATGTTCAAATTGTCCCACAATTaGTCAGTGAGGCCCCTTCGGCCTGGCTCCCTACCCTTTTGCCGG +
Preference number: 1 (lower is better)
Translates to: SLLSLFILMFKLSHN*SVRPLRPGSLPFCR
Trigger: CCGGCAAAAGGGTAGGGAGCCAGGCCGAAGGGGCCTCACTGACCAATTGTGGGACAATTTGAACATCAGGATGAATAATGACAGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR TCA 90 bp ATGGCAGATGGCACAACAGAAGAAGGAATTCACGATGTTTACCCATaGGGGATTAATCTCACACACACACACACACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: MADGTTEEGIHDVYP*GINLTHTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGATTAATCCCTCATGGGTAAACATCGTGAATTCCTTCTTCTGTTGTGCCATCTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
3UTR CCA 90 bp ATATTTGTACTCCTTCGCTCAGTCCCACAATCCACAAACGAGCTTTaGACTTGTCTCCTTTCCTTGAAGAAAATCGCACTACACATACAC +
Preference number: 1 (lower is better)
Translates to: IFVLLRSVPQSTNEL*TCLLSLKKIALHIH
Trigger: GTGTATGTGTAGTGCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGAGCGAAGGAGTACAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR GCA 90 bp GTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCAGCCTCCGTGGAAAATaGAGCCGTTCCGCACCTCCG +
Preference number: 2 (lower is better)
Translates to: VAHPPDSLCAMKTWTRWRSLRGK*SRSAPP
Trigger: CGGAGGTGCGGAACGGCTGCATTTTCCACGGAGGCT...GCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR-3UTR TCA 90 bp GCCTCACGTAACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTCCCTCTGTACAGTGTaGTGTGAAGCTCCGAGGGCG +
Preference number: 2 (lower is better)
Translates to: ASRNWAVFSVPDRRFLTLSLCTV*CEAPRA
Trigger: CGCCCTCGGAGCTTCACATCACACTGTACAGAGGGA...CAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTTACGTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR CAA 90 bp GGCAGTCACCAAAGTTTTCTCCCTTCTTTCTTCCATGCTGGCTTCTaGCCCACCGCCCACCGTGAGCACCCCAGCTCTGAGCGACGTGGA +
Preference number: 2 (lower is better)
Translates to: GSHQSFLPSFFHAGF*PTAHREHPSSERRG
Trigger: TCCACGTCGCTCAGAGCTGGGGTGCTCACGGTGGGCGGTGGGCAAGAAGCCAGCATGGAAGAAAGAAGGGAGAAAACTTTGGTGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR TCA 90 bp CTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGCTGTACAGTGTGATGTaGAGCTCCGAGGGCGTAACG +
Preference number: 2 (lower is better)
Translates to: LCGDVAHPPDSLCAMKTWLYSVM*SSEGVT
Trigger: CGTTACGCCCTCGGAGCTTCACATCACACTGTACAG...CCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR-3UTR GCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTTTTGGCTGGTGCACCTaGTCCCTTCAGACGGAGCAG +
Preference number: 2 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCFGWCT*SLQTEQ
Trigger: CTGCTCCGTCTGAAGGGAGCAGGTGCACCAGCCAAA...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR CCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTCCCTCGCTGACATTTTaGCTGGTGCACCTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCPSLTF*LVHLLP
Trigger: AGGGAGCAGGTGCACCAGCCAAAATGTCAGCGAGGG...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR CCA 90 bp AGCGCCCTCCCTCCTGCTAGTGTGAAAATCAGGGTCGGAGCCTCCCAAATCTATTGGACGAGGTGGCGCTaGCAGCAGAGACCCTGGTCA +
Preference number: 2 (lower is better)
Translates to: SALPPASVKIRVGASQIYWTRWR*QQRPWS
Trigger: TGACCAGGGTCTCTGCTGCCAGCGCCACCTCGTCCA...ATAGATTTGGGAGGCTCCGACCCTGATTTTCACACTAGCAGGAGGGAGGGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491209.5
3UTR-3UTR TCA 90 bp CTCGGCGGAAACGTTAAGCCCCGGACACTGCCTCACGTAACTGGGCTGTTTTCTACTCCCTGTGCGCTATaGAAACCTGGACGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: LGGNVKPRTLPHVTGLFSTPCAL*KPGRGG
Trigger: GCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGT...AGAAAACAGCCCAGTTACGTGAGGCAGTGTCCGGGGCTTAACGTTTCCGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR-3UTR CCA 90 bp CTCGGCGGAAACGTTAAGCCCCGGACACTGCCTCACGTAACTGGGCTGTTTTCTTGCGCTATGAAAACCTaGACGAGGTGGCGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: LGGNVKPRTLPHVTGLFSCAMKT*TRWRWQ
Trigger: CTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCA...AGAAAACAGCCCAGTTACGTGAGGCAGTGTCCGGGGCTTAACGTTTCCGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR-3UTR TCA 90 bp CTCGGCGGAAACGTTAAGCCCCGGACACTGCCTCACGTAACTGGGCTGTTTTCTCCGCTTTTGTCCATATaGACGATCTTCCCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: LGGNVKPRTLPHVTGLFSPLLSI*TIFPLP
Trigger: GGGAAGGGGGAAGATCGTTCATATGGACAAAAGCGG...AGAAAACAGCCCAGTTACGTGAGGCAGTGTCCGGGGCTTAACGTTTCCGCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR CAA 90 bp CCTTCGGCCTGGCTCCCTACCCTTTTGCCGGGTTGCCGTCACGTTTaGAGCCTTTATTTTACTTCACCACACACAATGCTCCAGGCTCAC +
Preference number: 2 (lower is better)
Translates to: PSAWLPTLLPGCRHV*SLYFTSPHTMLQAH
Trigger: GTGAGCCTGGAGCATTGTGTGTGGTGAAGTAAAATAAAGGCTCAAAACGTGACGGCAACCCGGCAAAAGGGTAGGGAGCCAGGCCGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR CCA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCAGGAGAGCAAAGCGCTaGCCTGGGATCCAGGGGGCC +
Preference number: 2 (lower is better)
Translates to: PTIHKRALDLSPFLEENRRRAKR*PGIQGA
Trigger: GGCCCCCTGGATCCCAGGCCAGCGCTTTGCTCTCCT...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR CAA 90 bp AATCGCACTACACATACACATCTACGTAGGCAAAGGTCCCTCTCTTaGTCCCCCTCGCTGACATTTTGGCTGGTGCACCTGCTCCCTTCA +
Preference number: 2 (lower is better)
Translates to: NRTTHTHLRRQRSLS*SPSLTFWLVHLLPS
Trigger: TGAAGGGAGCAGGTGCACCAGCCAAAATGTCAGCGAGGGGGACAAAGAGAGGGACCTTTGCCTACGTAGATGTGTATGTGTAGTGCGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR GCA 90 bp CTGATGTTCAAATTGTCCCACAATTGGTCAGTGAGGCCCCTTCGGCCTGGCTCCCTTCACCACACACAATaGTCCAGGCTCACCTTGAAA +
Preference number: 2 (lower is better)
Translates to: LMFKLSHNWSVRPLRPGSLHHTQ*SRLTLK
Trigger: TTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTGAAG...GGAGCCAGGCCGAAGGGGCCTCACTGACCAATTGTGGGACAATTTGAACATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR CAA 90 bp ATCTCTCCTGTCATTATTCATCCTGATGTTCAAATTGTCCCACAATaGGTCAGTGAGGCCCCTTCGGCCTGGCTCCCTACCCTTTTGCCG +
Preference number: 2 (lower is better)
Translates to: ISPVIIHPDVQIVPQ*VSEAPSAWLPTLLP
Trigger: CGGCAAAAGGGTAGGGAGCCAGGCCGAAGGGGCCTCACTGACCAATTGTGGGACAATTTGAACATCAGGATGAATAATGACAGGAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR GCA 90 bp CCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTAATGGGAAATGGTTTCCCTTCTTTCTTCCATaGTGGCTTCTTGCCCACCGC +
Preference number: 2 (lower is better)
Translates to: PRLQKQLFLQLHFNGKWFPFFLP*WLLAHR
Trigger: GCGGTGGGCAAGAAGCCAGCATGGAAGAAAGAAGGG...AAACCATTTCCCATTAAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR CCA 90 bp CTGATGTTCAAATTGTCCCACAATTGGTCAGTGAGGCCCCTTCGGCCTGGCTCCTCCACAAACGAGCTTTaGACTTGTCTCCTTTCCTTG +
Preference number: 2 (lower is better)
Translates to: LMFKLSHNWSVRPLRPGSSTNEL*TCLLSL
Trigger: CAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGA...GGAGCCAGGCCGAAGGGGCCTCACTGACCAATTGTGGGACAATTTGAACATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR TCA 90 bp TTTATTTTACTTCACCACACACAATGCTCCAGGCTCACCTTGAAATTTTTGCCCCTTTGTCCCCCTCGCTaGCATTTTGGCTGGTGCACC +
Preference number: 2 (lower is better)
Translates to: FILLHHTQCSRLTLKFLPLCPPR*HFGWCT
Trigger: GGTGCACCAGCCAAAATGTCAGCGAGGGGGACAAAG...GGGCAAAAATTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTGAAGTAAAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR CAA 90 bp TCAGTCCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTaGAAGAAAATCGCACTACACATACACATCTACGTAGGCAAAGGT +
Preference number: 2 (lower is better)
Translates to: SVPQSTNELWTCLLS*KKIALHIHIYVGKG
Trigger: ACCTTTGCCTACGTAGATGTGTATGTGTAGTGCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR TCA 90 bp ACCTTGAAATTTTTGCCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTCTTGTCTCCTTTCCTTaGAGAAAATCGCACTACACA +
Preference number: 2 (lower is better)
Translates to: TLKFLPRLQKQLFLQLHFLVSFP*RKSHYT
Trigger: TGTGTAGTGCGATTTTCTTCAAGGAAAGGAGACAAG...AAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR GCA 90 bp CAGATGGCACAACAGAAGAAGGAATTCACGATGTTTACCCATGAGGGATTAATCTCAGCATTCAGAGGTTaGAAACCCCAGAGAAATCTC +
Preference number: 2 (lower is better)
Translates to: QMAQQKKEFTMFTHEGLISAFRG*KPQRNL
Trigger: GAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGA...GATTAATCCCTCATGGGTAAACATCGTGAATTCCTTCTTCTGTTGTGCCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
3UTR-3UTR CCA 90 bp TTCACGATGTTTACCCATGAGGGATTAATCTCACACACACACACACACACACACGTCAGTGATGTGAGCTaGCAATTTTCAGTAGAGGAA +
Preference number: 2 (lower is better)
Translates to: FTMFTHEGLISHTHTHTHVSDVS*QFSVEE
Trigger: TTCCTCTACTGAAAATTGCCAGCTCACATCACTGAC...GTGTGTGTGTGTGTGTGTGTGTGAGATTAATCCCTCATGGGTAAACATCGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
3UTR-3UTR CAA 90 bp ATGCTGGCTTCTTGCCCACCGCCCACCGTGAGCACCCCAGCTCTGAGCGACGTGCCCCTCGCTGACATTTaGGCTGGTGCACCTGCTCCC +
Preference number: 3 (lower is better)
Translates to: MLASCPPPTVSTPALSDVPLADI*AGAPAP
Trigger: GGGAGCAGGTGCACCAGCCAAAATGTCAGCGAGGGG...CACGTCGCTCAGAGCTGGGGTGCTCACGGTGGGCGGTGGGCAAGAAGCCAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR CCA 72 bp CCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTaGCGCTGGCAGCAGAGACCCTGGTCACCGCTCCCT +
Preference number: 3 (lower is better)
Translates to: PDSLCAMKTWTR*RWQQRPWSPLP
Trigger: AGGGAGCGGTGACCAGGGTCTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR TCA 72 bp ACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTaGCCCTGTGCGGAGATGTTGCGCATCCGCCCGACT +
Preference number: 3 (lower is better)
Translates to: TGLFSRCLTAAS*PCAEMLRIRPT
Trigger: AGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR GCA 72 bp CTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTaGGCTATGAAAACCTGGACGAGGTGGCGCTGGCAG +
Preference number: 3 (lower is better)
Translates to: LCGDVAHPPDSL*AMKTWTRWRWQ
Trigger: CTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR-3UTR CAA 90 bp CTCGGCGGAAACGTTAAGCCCCGGACACTGCCTCACGTAACTGGGCTGTTTTCTCCCTGTGCGGAGATGTaGCGCATCCGCCCGACTCCC +
Preference number: 3 (lower is better)
Translates to: LGGNVKPRTLPHVTGLFSPCAEM*RIRPTP
Trigger: GGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGG...AGAAAACAGCCCAGTTACGTGAGGCAGTGTCCGGGGCTTAACGTTTCCGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR TCA 72 bp GAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATaGAAACCTGGACGAGGTGGCGCTGGCAGCAGAGAC +
Preference number: 3 (lower is better)
Translates to: EMLRIRPTPCAL*KPGRGGAGSRD
Trigger: GTCTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR CCA 72 bp TCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTaGCAGCAGAGACCCTGGTCACCGCTCCCTCTGTAC +
Preference number: 3 (lower is better)
Translates to: SLCAMKTWTRWR*QQRPWSPLPLY
Trigger: GTACAGAGGGAGCGGTGACCAGGGTCTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR TCA 72 bp AGCTCCGAGGGCGTAACGACAGCAGCCGGTCAACCCTaGCATCTGTGCACTAGCCTCCGTGGAAAATGCAGC +
Preference number: 3 (lower is better)
Translates to: SSEGVTTAAGQP*HLCTSLRGKCS
Trigger: GCTGCATTTTCCACGGAGGCTAGTGCACAGATGTCAGGGTTGACCGGCTGCTGTCGTTACGCCCTCGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR TCA 72 bp AGACCCTGGTCACCGCTCCCTCTGTACAGTGTGATGTaGAGCTCCGAGGGCGTAACGACAGCAGCCGGTCAA +
Preference number: 3 (lower is better)
Translates to: RPWSPLPLYSVM*SSEGVTTAAGQ
Trigger: TTGACCGGCTGCTGTCGTTACGCCCTCGGAGCTTCACATCACACTGTACAGAGGGAGCGGTGACCAGGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR CCA 72 bp CAAAGGTCCCTCTCTTTGTCCCCCTCGCTGACATTTTaGCTGGTGCACCTGCTCCCTTCAGACGGAGCAGGA +
Preference number: 3 (lower is better)
Translates to: QRSLSLSPSLTF*LVHLLPSDGAG
Trigger: TCCTGCTCCGTCTGAAGGGAGCAGGTGCACCAGCCAAAATGTCAGCGAGGGGGACAAAGAGAGGGACCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR CAA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTCAAAGGTCCCTCTCTTaGTCCCCCTCGCTGACATTT +
Preference number: 3 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCQRSLS*SPSLTF
Trigger: AAATGTCAGCGAGGGGGACAAAGAGAGGGACCTTTG...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR CAA 90 bp CTGATGTTCAAATTGTCCCACAATTGGTCAGTGAGGCCCCTTCGGCCTGGCTCCCTCACCTTGAAATTTTaGCCCCGGCTCCAGAAGCAG +
Preference number: 3 (lower is better)
Translates to: LMFKLSHNWSVRPLRPGSLTLKF*PRLQKQ
Trigger: CTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGTGAG...GGAGCCAGGCCGAAGGGGCCTCACTGACCAATTGTGGGACAATTTGAACATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR CCA 72 bp TCATTATTCATCCTGATGTTCAAATTGTCCCACAATTaGTCAGTGAGGCCCCTTCGGCCTGGCTCCCTACCC +
Preference number: 3 (lower is better)
Translates to: SLFILMFKLSHN*SVRPLRPGSLP
Trigger: GGGTAGGGAGCCAGGCCGAAGGGGCCTCACTGACCAATTGTGGGACAATTTGAACATCAGGATGAATAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR CAA 90 bp CTGATGTTCAAATTGTCCCACAATTGGTCAGTGAGGCCCCTTCGGCCTGGCTCCGGTTGCCGTCACGTTTaGAGCCTTTATTTTACTTCA +
Preference number: 3 (lower is better)
Translates to: LMFKLSHNWSVRPLRPGSGCRHV*SLYFTS
Trigger: TGAAGTAAAATAAAGGCTCAAAACGTGACGGCAACC...GGAGCCAGGCCGAAGGGGCCTCACTGACCAATTGTGGGACAATTTGAACATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR CCA 72 bp CTCCTTCGCTCAGTCCCACAATCCACAAACGAGCTTTaGACTTGTCTCCTTTCCTTGAAGAAAATCGCACTA +
Preference number: 3 (lower is better)
Translates to: LLRSVPQSTNEL*TCLLSLKKIAL
Trigger: TAGTGCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGAGCGAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR CAA 90 bp CCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTAATGGGAAATGGTTTACTTGTCTCCTTTCCTaGAAGAAAATCGCACTACAC +
Preference number: 3 (lower is better)
Translates to: PRLQKQLFLQLHFNGKWFTCLLS*KKIALH
Trigger: GTGTAGTGCGATTTTCTTCAAGGAAAGGAGACAAGT...AAACCATTTCCCATTAAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR CAA 90 bp ACCTTGAAATTTTTGCCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTATCCACAAACGAGCTTaGGACTTGTCTCCTTTCCTT +
Preference number: 3 (lower is better)
Translates to: TLKFLPRLQKQLFLQLHFIHKRA*DLSPFL
Trigger: AAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGAT...AAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR CAA 90 bp ACCTTGAAATTTTTGCCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTAAACGAGCTTTGGACTaGTCTCCTTTCCTTGAAGAA +
Preference number: 3 (lower is better)
Translates to: TLKFLPRLQKQLFLQLHFKRALD*SPFLEE
Trigger: TTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTT...AAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR-3UTR CAA 90 bp CAGATGGCACAACAGAAGAAGGAATTCACGATGTTTACCCATGAGGGATTAATCCTCAGCATTCAGAGGTaGCAAACCCCAGAGAAATCT +
Preference number: 3 (lower is better)
Translates to: QMAQQKKEFTMFTHEGLILSIQR*QTPEKS
Trigger: AGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAG...GATTAATCCCTCATGGGTAAACATCGTGAATTCCTTCTTCTGTTGTGCCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
3UTR TCA 72 bp GGCACAACAGAAGAAGGAATTCACGATGTTTACCCATaGGGGATTAATCTCACACACACACACACACACACA +
Preference number: 3 (lower is better)
Translates to: GTTEEGIHDVYP*GINLTHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTGAGATTAATCCCTCATGGGTAAACATCGTGAATTCCTTCTTCTGTTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
3UTR CCA 72 bp TCAATAAGGGGAACTATGGACAAAGCTAATGGCAGATaGCACAACAGAAGAAGGAATTCACGATGTTTACCC +
Preference number: 3 (lower is better)
Translates to: SIRGTMDKANGR*HNRRRNSRCLP
Trigger: GGGTAAACATCGTGAATTCCTTCTTCTGTTGTGCCATCTGCCATTAGCTTTGTCCATAGTTCCCCTTATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR GCA 90 bp ATGCTGGCTTCTTGCCCACCGCCCACCGTGAGCACCCCAGCTCTGAGCGACGTGCGGAACGCCGGCATCTaGCTGCCAGGGAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: MLASCPPPTVSTPALSDVRNAGI*LPGSSC
Trigger: GCAGGAGCTCCCTGGCAGGCAGATGCCGGCGTTCCG...CACGTCGCTCAGAGCTGGGGTGCTCACGGTGGGCGGTGGGCAAGAAGCCAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp CCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGCGGAACGCCGGCATCTaGCTGCCAGGGAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PPDSLCAMKTWTRWRWQQRNAGI*LPGSSC
Trigger: GCAGGAGCTCCCTGGCAGGCAGATGCCGGCGTTCCG...CTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp TCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCCTTCTCCTGCCTCAGCCAGGCCTCACCTCCGATaGGGCACTCCCACCCGCGGT +
Preference number: 4 (lower is better)
Translates to: SAHCKLRFPGSRPSPASARPHLR*GTPTRG
Trigger: ACCGCGGGTGGGAGTGCCGCATCGGAGGTGAGGCCT...GGCTGAGGCAGGAGAAGGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR TCA 90 bp ACCGATCCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCTACGTGGACTGGCAGCTaGGCTCCAGAGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TDPRSPVAALTPRAGINPTWTGS*APEARA
Trigger: TGCCCTGGCCTCTGGAGCTCAGCTGCCAGTCCACGT...AGGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGGATCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp ATGCTGGCTTCTTGCCCACCGCCCACCGTGAGCACCCCAGCTCTGAGCGACGTGCAGGGCCTAGCACCTTaGCCTCTGAGCTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: MLASCPPPTVSTPALSDVQGLAP*PLSSAP
Trigger: GGGAGCCGAGCTCAGAGGTCAAGGTGCTAGGCCCTG...CACGTCGCTCAGAGCTGGGGTGCTCACGGTGGGCGGTGGGCAAGAAGCCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCTCGTAACCCCTCAAGGGAGAGGTaGGGGTCTGAGCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PRSPVAALTPRAGINPRNPSRER*GSEPSP
Trigger: AGGGCTGGGCTCAGACCCTCACCTCTCCCTTGAGGG...GTTACGAGGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CACCGATCCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCCAGGGCCTAGCACCTTaGCCTCTGGCAGGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: HRSPFPGGRPDTSRWNKPQGLAP*PLAGSS
Trigger: GCTGCTACCTGCCAGAGGTCAAGGTGCTAGGCCCTG...GGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGGATCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515271.1
CDS-3UTR CCA 90 bp ATGCTGGCTTCTTGCCCACCGCCCACCGTGAGCACCCCAGCTCTGAGCGACGTGAGGAGAGCAAAGCGCTaGCCTGGGATCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: MLASCPPPTVSTPALSDVRRAKR*PGIQGA
Trigger: GGCCCCCTGGATCCCAGGCCAGCGCTTTGCTCTCCT...CACGTCGCTCAGAGCTGGGGTGCTCACGGTGGGCGGTGGGCAAGAAGCCAGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp GTGCCTGACCGCCGCTTCCTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACGCTGCAGGACCACGCTaGCATAGGCGATGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: VPDRRFLTLCGDVAHPPDAAGPR*HRRCRP
Trigger: AGGACGACATCGCCTATGGCAGCGTGGTCCTGCAGC...GTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAAGCGGCGGTCAGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp ATGCTGGCTTCTTGCCCACCGCCCACCGTGAGCACCCCAGCTCTGAGCGACGTGCCGGCAGCGGGCAGATaGTCAGGGGATCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: MLASCPPPTVSTPALSDVPAAGR*SGDPDV
Trigger: AACATCCGGATCCCCTGACCATCTGCCCGCTGCCGG...CACGTCGCTCAGAGCTGGGGTGCTCACGGTGGGCGGTGGGCAAGAAGCCAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp GTACAGTGTGATGTGAAGCTCCGAGGGCGTAACGACAGCAGCCGGTCAACCCTGCACTCCCACCCGCGGTaGTCTGCGGGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VQCDVKLRGRNDSSRSTLHSHPR*SAGPGW
Trigger: CCAGCCTGGGCCCGCAGACCACCGCGGGTGGGAGTG...CAGGGTTGACCGGCTGCTGTCGTTACGCCCTCGGAGCTTCACATCACACTGTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR TCA 90 bp GCCTCACGTAACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGCTCGGCTCCCCAGGCTaGAGGAGGAGGAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: ASRNWAVFSVPDRRFLTLLGSPG*RRRRCM
Trigger: CATGCACCTCCTCCTCCTTCAGCCTGGGGAGCCGAG...CAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTTACGTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR TCA 90 bp TTCCTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGCAGGGCCTAGCACCTTaGCCTCTGAGCTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FLTLCGDVAHPPDSLCAMQGLAP*PLSSAP
Trigger: GGGAGCCGAGCTCAGAGGTCAAGGTGCTAGGCCCTG...CATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR TCA 90 bp ATGCTGGCTTCTTGCCCACCGCCCACCGTGAGCACCCCAGCTCTGAGCGACGTGAGACGGACACATTGCTaGGGGCTCCCGCTCGGACAA +
Preference number: 4 (lower is better)
Translates to: MLASCPPPTVSTPALSDVRRTHC*GLPLGQ
Trigger: TTGTCCGAGCGGGAGCCCTCAGCAATGTGTCCGTCT...CACGTCGCTCAGAGCTGGGGTGCTCACGGTGGGCGGTGGGCAAGAAGCCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CGCTTCCTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTAGACGGACACATTGCTaGGGGCTCCCGCTCGGACAA +
Preference number: 4 (lower is better)
Translates to: RFLTLCGDVAHPPDSLCARRTHC*GLPLGQ
Trigger: TTGTCCGAGCGGGAGCCCTCAGCAATGTGTCCGTCT...AGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CACCGATCCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCACTCCCTGTGCGCTATaGAAACCTGGACGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: HRSPFPGGRPDTSRWNKPTPCAL*KPGRGG
Trigger: GCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGT...GGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGGATCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CGCTTCCTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTTGTTTTCTCGGTGCCTaGCCGCCGCTTCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: RFLTLCGDVAHPPDSLCACFLGA*PPLPDP
Trigger: AGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACA...AGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp CCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGCCAGGGAGCTCCTGCTaGTCCTGGTACAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: PPDSLCAMKTWTRWRWQQPGSSC*SWYRCT
Trigger: GGTACACCTGTACCAGGAGCAGCAGGAGCTCCCTGG...CTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp TGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGAGATGTTCGGAACGCCGGCATCTaGCTGCCAGGGAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WAVFSVPDRRFLTLCGDVRNAGI*LPGSSC
Trigger: GCAGGAGCTCCCTGGCAGGCAGATGCCGGCGTTCCG...AACATCTCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp GCCTCACGTAACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTCTCGGCTTCTCCGCTaGTTCCGGAGGACGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ASRNWAVFSVPDRRFLTLSRLLR*FRRTPS
Trigger: GCTGGGCGTCCTCCGGAAGCAGCGGAGAAGCCGAGA...CAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTTACGTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp CGCTTCCTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTCCGCCCGACTCCCTGTaGGCTATGAAAACCTGGACG +
Preference number: 4 (lower is better)
Translates to: RFLTLCGDVAHPPDSLCAPPDSL*AMKTWT
Trigger: CGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGG...AGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CGCTTCCTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTTCCCTAGACGTGGACTaGCAGCTGAGCTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RFLTLCGDVAHPPDSLCASLDVD*QLSSRG
Trigger: GCCTCTGGAGCTCAGCTGCCAGTCCACGTCTAGGGA...AGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp ACCGATCCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCTAAAACCTGGACGAGGTaGCGCTGGCAGCAGAGACCC +
Preference number: 4 (lower is better)
Translates to: TDPRSPVAALTPRAGINPKTWTR*RWQQRP
Trigger: GGGTCTCTGCTGCCAGCGCCACCTCGTCCAGGTTTT...AGGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGGATCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp TTCCTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGGCTCCAGGCAGGGGATaGGGAAGTGCGCACCCTTGG +
Preference number: 4 (lower is better)
Translates to: FLTLCGDVAHPPDSLCAMAPGRG*GSAHPW
Trigger: CCAAGGGTGCGCACTTCCCCATCCCCTGCCTGGAGC...CATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR TCA 90 bp CACCGATCCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCACCACATTGAAGGTCTaGCTCCGGAACCAGCGGATC +
Preference number: 4 (lower is better)
Translates to: HRSPFPGGRPDTSRWNKPTTLKV*LRNQRI
Trigger: GATCCGCTGGTTCCGGAGTCAGACCTTCAATGTGGT...GGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGGATCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp AACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGAGATCCCTCAAGGGAGAGGTaGGGGTCTGAGCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: NWAVFSVPDRRFLTLCGDPSRER*GSEPSP
Trigger: AGGGCTGGGCTCAGACCCTCACCTCTCCCTTGAGGG...ATCTCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CACCGATCCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCTGGTGGTCTCTCCACTaGACCTTAGGCTTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: HRSPFPGGRPDTSRWNKPWWSLH*TLGLGY
Trigger: GTACCCCAAGCCTAAGGTTCAGTGGAGAGACCACCA...GGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGGATCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CACCGATCCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCTCCCTCCTGCTAGTGTaGAAATCAGGGTCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HRSPFPGGRPDTSRWNKPSLLLV*KSGSEP
Trigger: AGGCTCCGACCCTGATTTTCACACTAGCAGGAGGGA...GGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGGATCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR GCA 90 bp CTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAATCTCGGCTTCTCCGCTaGTTCCGGAGGACGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LTLCGDVAHPPDSLCAMKSRLLR*FRRTPS
Trigger: GCTGGGCGTCCTCCGGAAGCAGCGGAGAAGCCGAGA...TTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp GCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGAGAGCCTCCGTGGAAAATaGAGCCGTTCCGCACCTCCG +
Preference number: 4 (lower is better)
Translates to: ARLPVRYENLDEVALAAESLRGK*SRSAPP
Trigger: CGGAGGTGCGGAACGGCTGCATTTTCCACGGAGGCT...CTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp GTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCCCGCCCGACTCCCTGTaGGCTATGAAAACCTGGACG +
Preference number: 4 (lower is better)
Translates to: VAHPPDSLCAMKTWTRWRPPDSL*AMKTWT
Trigger: CGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGG...GCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp CGTAACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGACCTGTGCGGAGATGTTaGGCATCCGCCCGACTCCCT +
Preference number: 4 (lower is better)
Translates to: RNWAVFSVPDRRFLTLCGPVRRC*ASARLP
Trigger: AGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGG...TCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp AGGCAGGGGATGGGGAAGTGCGCACCCTTGGCTGCCCTTCTGCATAGGAGGGTGGCAGTGGGGGCCACCTaGCAGGTAGCAGCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: RQGMGKCAPLAALLHRRVAVGAT*QVAAKG
Trigger: ACCTTTTGCTGCTACCTGCCAGGTGGCCCCCACTGC...CACCCTCCTATGCAGAAGGGCAGCCAAGGGTGCGCACTTCCCCATCCCCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR CCA 90 bp GCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGAGAGCTGTGGCCATAGGTaGCACGGGAACTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ARLPVRYENLDEVALAAESCGHR*HGNSTS
Trigger: GGAGGTGGAGTTCCCGTGCCACCTATGGCCACAGCT...CTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGAGACCCTGTGGACGAGGTGGCGCTaGCAGCAGAGACCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LPVRYENLDEVALAAETLWTRWR*QQRPWS
Trigger: TGACCAGGGTCTCTGCTGCCAGCGCCACCTCGTCCA...CAGGGTCTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp TCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCCTTCTCCTGCCTCAGCCTGCGCTATGAAAACCTaGACGAGGTGGCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SAHCKLRFPGSRPSPASACAMKT*TRWRWQ
Trigger: CTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCA...GGCTGAGGCAGGAGAAGGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR CCA 90 bp CGCTTCCTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTTGCGCTATGAAAACCTaGACGAGGTGGCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RFLTLCGDVAHPPDSLCACAMKT*TRWRWQ
Trigger: CTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCA...AGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTACGTGGACTGGCAGCTaGGCTCCAGAGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCTWTGS*APEARA
Trigger: TGCCCTGGCCTCTGGAGCTCAGCTGCCAGTCCACGT...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CGCTTCCTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTACCACATTGAAGGTCTaGCTCCGGAACCAGCGGATC +
Preference number: 4 (lower is better)
Translates to: RFLTLCGDVAHPPDSLCATTLKV*LRNQRI
Trigger: GATCCGCTGGTTCCGGAGTCAGACCTTCAATGTGGT...AGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp ACCGATCCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCTAGGCGATGTCGTCCTTaGCCAACTTGGTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TDPRSPVAALTPRAGINPRRCRP*PTWSCS
Trigger: GGAACAGGACCAAGTTGGTCAAGGACGACATCGCCT...AGGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGGATCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGCCTTGTCAGAGGGGATaGTGCTGTGAAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PPDSLCAMKTWTRWRWQQPCQRG*CCEAAG
Trigger: TCCTGCAGCTTCACAGCATCATCCCCTCTGACAAGG...CTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp ACCGATCCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCTTGGTGGTCTCTCCACTaGACCTTAGGCTTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: TDPRSPVAALTPRAGINPWWSLH*TLGLGY
Trigger: GTACCCCAAGCCTAAGGTTCAGTGGAGAGACCACCA...AGGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGGATCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CGTAACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGAAGACGGACACATTGCTaGGGGCTCCCGCTCGGACAA +
Preference number: 4 (lower is better)
Translates to: RNWAVFSVPDRRFLTLCGRRTHC*GLPLGQ
Trigger: TTGTCCGAGCGGGAGCCCTCAGCAATGTGTCCGTCT...TCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp GCCTCACGTAACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGGCAGCCGGTCAACCCTaGCATCTGTGCACTAGCCTC +
Preference number: 4 (lower is better)
Translates to: ASRNWAVFSVPDRRFLTLAAGQP*HLCTSL
Trigger: GAGGCTAGTGCACAGATGTCAGGGTTGACCGGCTGC...CAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTTACGTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp GTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTCCCTCTGTACAGTGTaGTGTGAAGCTCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: VAHPPDSLCAMKTWTRWRSLCTV*CEAPRA
Trigger: CGCCCTCGGAGCTTCACATCACACTGTACAGAGGGA...GCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAACTGGTCTCGATCTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: LTLCGDVAHPPDSLCAMKLVSIS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGATCGAGACCAG...TTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR GCA 90 bp TTCCTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAGCCTCCGTGGAAAATaGAGCCGTTCCGCACCTCCG +
Preference number: 4 (lower is better)
Translates to: FLTLCGDVAHPPDSLCAMSLRGK*SRSAPP
Trigger: CGGAGGTGCGGAACGGCTGCATTTTCCACGGAGGCT...CATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp CTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGCCTGTGCGGAGATGTTaGGCATCCGCCCGACTCCCT +
Preference number: 4 (lower is better)
Translates to: LCGDVAHPPDSLCAMKTWPVRRC*ASARLP
Trigger: AGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGG...CCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp AACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGAGATCAGGGGATGGGGAAGTaGGCACCCTTGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: NWAVFSVPDRRFLTLCGDQGMGK*APLAAL
Trigger: AAGGGCAGCCAAGGGTGCGCACTTCCCCATCCCCTG...ATCTCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR CCA 90 bp ATGCTGGCTTCTTGCCCACCGCCCACCGTGAGCACCCCAGCTCTGAGCGACGTGGATGGCTTCAAACTCTaGAGGCAGGCACTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: MLASCPPPTVSTPALSDVDGFKL*RQALSL
Trigger: CAGGGACAGTGCCTGCCTCCAGAGTTTGAAGCCATC...CACGTCGCTCAGAGCTGGGGTGCTCACGGTGGGCGGTGGGCAAGAAGCCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp CCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGGGGCATCCCAGACGATaGCTTCAAACTCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PPDSLCAMKTWTRWRWQQGHPRR*LQTLEA
Trigger: TGCCTCCAGAGTTTGAAGCCATCGTCTGGGATGCCC...CTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp ATGCTGGCTTCTTGCCCACCGCCCACCGTGAGCACCCCAGCTCTGAGCGACGTGCCCGAGAAGGTGTCGTaGAAGGTGAAGATGTGGGAG +
Preference number: 4 (lower is better)
Translates to: MLASCPPPTVSTPALSDVPEKVS*KVKMWE
Trigger: CTCCCACATCTTCACCTTCCACGACACCTTCTCGGG...CACGTCGCTCAGAGCTGGGGTGCTCACGGTGGGCGGTGGGCAAGAAGCCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp TTCCTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGGCGGGTTTTGGCACTTaGGCAGGTGCGTGCAGAACG +
Preference number: 4 (lower is better)
Translates to: FLTLCGDVAHPPDSLCAMAGFGT*AGACRT
Trigger: CGTTCTGCACGCACCTGCCCAAGTGCCAAAACCCGC...CATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp TGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGAGATGTTTGGACGAGGTGGCGCTaGCAGCAGAGACCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: WAVFSVPDRRFLTLCGDVWTRWR*QQRPWS
Trigger: TGACCAGGGTCTCTGCTGCCAGCGCCACCTCGTCCA...AACATCTCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CACCGATCCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCACTGCCTCACGTAACTaGGCTGTTTTCTCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: HRSPFPGGRPDTSRWNKPTASRN*AVFSVP
Trigger: AGGCACCGAGAAAACAGCCCAGTTACGTGAGGCAGT...GGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGGATCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp TGTGATGTGAAGCTCCGAGGGCGTAACGACAGCAGCCGGTCAACCCTGACATCTACGTGGACTGGCAGCTaGGCTCCAGAGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CDVKLRGRNDSSRSTLTSTWTGS*APEARA
Trigger: TGCCCTGGCCTCTGGAGCTCAGCTGCCAGTCCACGT...AGATGTCAGGGTTGACCGGCTGCTGTCGTTACGCCCTCGGAGCTTCACATCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp GAGACCCTGGTCACCGCTCCCTCTGTACAGTGTGATGTGAAGCTCCGAGGGCGTGGAGTCTGGGGAGACTaGGAGGTCCACCATCTCTCG +
Preference number: 4 (lower is better)
Translates to: ETLVTAPSVQCDVKLRGRGVWGD*EVHHLS
Trigger: CGAGAGATGGTGGACCTCTCAGTCTCCCCAGACTCC...ACGCCCTCGGAGCTTCACATCACACTGTACAGAGGGAGCGGTGACCAGGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR TCA 90 bp CTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAGAGGGGATGATGCTGTaGAGCTGCAGGACCACGCTG +
Preference number: 4 (lower is better)
Translates to: LTLCGDVAHPPDSLCAMKEGMML*SCRTTL
Trigger: CAGCGTGGTCCTGCAGCTTCACAGCATCATCCCCTC...TTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp GCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGAGGAATGCCTCCTTCCTTaGAGCCCTCAAGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ARLPVRYENLDEVALAAEECLLP*SPQGRG
Trigger: ACCTCTCCCTTGAGGGCTTCAAGGAAGGAGGCATTC...CTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp GCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGAGCAGATGTTTCCAGACTaGACAGGTCCTGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: ARLPVRYENLDEVALAAEQMFPD*TGPGHP
Trigger: GGGATGCCCAGGACCTGTTCAGTCTGGAAACATCTG...CTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp GCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGAGCCCACAGCCTTTAGATaGCGGCGGGTTTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: ARLPVRYENLDEVALAAEPTAFR*RRVLAL
Trigger: AAGTGCCAAAACCCGCCGTCATCTAAAGGCTGTGGG...CTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp ACCCTGGTCACCGCTCCCTCTGTACAGTGTGATGTGAAGCTCCGAGGGCGTAACCTGACCGCCGCTTCCTaGCCCTGTGCGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: TLVTAPSVQCDVKLRGRNLTAAS*PCAEML
Trigger: CAACATCTCCGCACAGGGTCAGGAAGCGGCGGTCAG...GTTACGCCCTCGGAGCTTCACATCACACTGTACAGAGGGAGCGGTGACCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp CCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCTCGTAACTGTCTCTTCTCCGCCTaGTTCCTCAGCTTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: PRSPVAALTPRAGINPRNCLFSA*FLSFSR
Trigger: CCGAGAAAAGCTGAGGAAGCAGGCGGAGAAGAGACA...GTTACGAGGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp ATGCTGGCTTCTTGCCCACCGCCCACCGTGAGCACCCCAGCTCTGAGCGACGTGTGCATATTTTTGGGCTaGTCTCCACTCAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: MLASCPPPTVSTPALSDVCIFLG*SPLSLA
Trigger: GGCCAGGCTGAGTGGAGAGCAGCCCAAAAATATGCA...CACGTCGCTCAGAGCTGGGGTGCTCACGGTGGGCGGTGGGCAAGAAGCCAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTTCCATGCTGGCTTCTTaGCCACCGCCCACCGTGAGC +
Preference number: 4 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCSMLAS*PPPTVS
Trigger: GCTCACGGTGGGCGGTGGGCAAGAAGCCAGCATGGA...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp CGACAGCAGCCGGTCAACCCTGACATCTGTGCACTAGCCTCCGTGGAAAATGCAACTTGGGCAGGTGCGTaGAGAACGCCCTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: RQQPVNPDICALASVENATWAGA*RTPCPR
Trigger: GCGGGGACAGGGCGTTCTGCACGCACCTGCCCAAGT...TGCATTTTCCACGGAGGCTAGTGCACAGATGTCAGGGTTGACCGGCTGCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp AACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGAGATGCGGGTTTTGGCACTTaGGCAGGTGCGTGCAGAACG +
Preference number: 4 (lower is better)
Translates to: NWAVFSVPDRRFLTLCGDAGFGT*AGACRT
Trigger: CGTTCTGCACGCACCTGCCCAAGTGCCAAAACCCGC...ATCTCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTGGAGTCTGGGGAGACTaGGAGGTCCACCATCTCTCG +
Preference number: 4 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCGVWGD*EVHHLS
Trigger: CGAGAGATGGTGGACCTCTCAGTCTCCCCAGACTCC...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CTGATGTTCAAATTGTCCCACAATTGGTCAGTGAGGCCCCTTCGGCCTGGCTCCCCCTCAAGGGAGAGGTaGGGGTCTGAGCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LMFKLSHNWSVRPLRPGSPSRER*GSEPSP
Trigger: AGGGCTGGGCTCAGACCCTCACCTCTCCCTTGAGGG...GGAGCCAGGCCGAAGGGGCCTCACTGACCAATTGTGGGACAATTTGAACATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp GCCTCACGTAACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGGAATGCCTCCTTCCTTaGAGCCCTCAAGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ASRNWAVFSVPDRRFLTLECLLP*SPQGRG
Trigger: ACCTCTCCCTTGAGGGCTTCAAGGAAGGAGGCATTC...CAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTTACGTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CGTAACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGACAGATGTTTCCAGACTaGACAGGTCCTGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: RNWAVFSVPDRRFLTLCGQMFPD*TGPGHP
Trigger: GGGATGCCCAGGACCTGTTCAGTCTGGAAACATCTG...TCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGACTCCCTGTGCGCTATaGAAACCTGGACGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RRCCASARLPVRYENLDETPCAL*KPGRGG
Trigger: GCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGT...CTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp TCTGTACAGTGTGATGTGAAGCTCCGAGGGCGTAACGACAGCAGCCGGTCAACCCTGACCGCCGCTTCCTaGCCCTGTGCGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: SVQCDVKLRGRNDSSRSTLTAAS*PCAEML
Trigger: CAACATCTCCGCACAGGGTCAGGAAGCGGCGGTCAG...GGTTGACCGGCTGCTGTCGTTACGCCCTCGGAGCTTCACATCACACTGTACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTCCAGGGAGCTCCTGCTaGTCCTGGTACAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCPGSSC*SWYRCT
Trigger: GGTACACCTGTACCAGGAGCAGCAGGAGCTCCCTGG...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp ACCCTGGTCACCGCTCCCTCTGTACAGTGTGATGTGAAGCTCCGAGGGCGTAACTCCCTAGACGTGGACTaGCAGCTGAGCTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TLVTAPSVQCDVKLRGRNSLDVD*QLSSRG
Trigger: GCCTCTGGAGCTCAGCTGCCAGTCCACGTCTAGGGA...GTTACGCCCTCGGAGCTTCACATCACACTGTACAGAGGGAGCGGTGACCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp TTCCTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGGCTGGTCAGCGATACTaGCTTCAAGGAGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FLTLCGDVAHPPDSLCAMAGQRY*LQGVWG
Trigger: TCCCCAGACTCCTTGAAGCCAGTATCGCTGACCAGC...CATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR CCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTAGCTGTGGCCATAGGTaGCACGGGAACTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCSCGHR*HGNSTS
Trigger: GGAGGTGGAGTTCCCGTGCCACCTATGGCCACAGCT...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp ACCCTGGTCACCGCTCCCTCTGTACAGTGTGATGTGAAGCTCCGAGGGCGTAACAGCTGTGGCCATAGGTaGCACGGGAACTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TLVTAPSVQCDVKLRGRNSCGHR*HGNSTS
Trigger: GGAGGTGGAGTTCCCGTGCCACCTATGGCCACAGCT...GTTACGCCCTCGGAGCTTCACATCACACTGTACAGAGGGAGCGGTGACCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CGTAACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGACGGATCTCCATTTGCTaGGCATCCAGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RNWAVFSVPDRRFLTLCGRISIC*ASSCGH
Trigger: ATGGCCACAGCTGGATGCCCAGCAAATGGAGATCCG...TCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CGTAACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGAGGGCATCCCAGACGATaGCTTCAAACTCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RNWAVFSVPDRRFLTLCGGHPRR*LQTLEA
Trigger: TGCCTCCAGAGTTTGAAGCCATCGTCTGGGATGCCC...TCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGGAAGTGCGCACCCTTaGCTGCCCTTCTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: RRCCASARLPVRYENLDEGSAHP*LPFCIG
Trigger: TCCTATGCAGAAGGGCAGCCAAGGGTGCGCACTTCC...CTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR CCA 90 bp AACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGAGATAGCCTCCCATGTAGCTaGGACTACAGGCACATGCCG +
Preference number: 4 (lower is better)
Translates to: NWAVFSVPDRRFLTLCGDSLPCS*DYRHMP
Trigger: CGGCATGTGCCTGTAGTCCCAGCTACATGGGAGGCT...ATCTCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491209.5
3UTR CAA 72 bp GCAAAGGTCCCTCTCTTTGTCCCCCTCGCTGACATTTaGGCTGGTGCACCTGCTCCCTTCAGACGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: AKVPLFVPLADI*AGAPAPFRRSR
Trigger: CCTGCTCCGTCTGAAGGGAGCAGGTGCACCAGCCAAAATGTCAGCGAGGGGGACAAAGAGAGGGACCTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGAGACCCTGACAGGTGTACCACATTaGAGGTCTGACTCCGGAACC +
Preference number: 4 (lower is better)
Translates to: LPVRYENLDEVALAAETLTGVPH*RSDSGT
Trigger: GGTTCCGGAGTCAGACCTTCAATGTGGTACACCTGT...CAGGGTCTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp AACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGAGATCCTTGTCAGAGGGGATaGTGCTGTGAAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: NWAVFSVPDRRFLTLCGDPCQRG*CCEAAG
Trigger: TCCTGCAGCTTCACAGCATCATCCCCTCTGACAAGG...ATCTCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CTGATGTTCAAATTGTCCCACAATTGGTCAGTGAGGCCCCTTCGGCCTGGCTCCTTGGACCCAGGAGGTTaGGGCTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LMFKLSHNWSVRPLRPGSLDPGG*GCTPAW
Trigger: CCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAA...GGAGCCAGGCCGAAGGGGCCTCACTGACCAATTGTGGGACAATTTGAACATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CGTAACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGACCGCTTTTGTCCATATaGACGATCTTCCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RNWAVFSVPDRRFLTLCGPLLSI*TIFPLP
Trigger: GGGAAGGGGGAAGATCGTTCATATGGACAAAAGCGG...TCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTTACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAACTGTACAGTGTGATGTaGAGCTCCGAGGGCGTAACG +
Preference number: 4 (lower is better)
Translates to: LTLCGDVAHPPDSLCAMKLYSVM*SSEGVT
Trigger: CGTTACGCCCTCGGAGCTTCACATCACACTGTACAG...TTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAGACAGAACAGATGGGTaGACACTGAGGCCTCACCTC +
Preference number: 4 (lower is better)
Translates to: LTLCGDVAHPPDSLCAMKDRTDG*TLRPHL
Trigger: GAGGTGAGGCCTCAGTGTTCACCCATCTGTTCTGTC...TTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR GCA 90 bp TGTGATGTGAAGCTCCGAGGGCGTAACGACAGCAGCCGGTCAACCCTGACATCTGCTGCAGGACCACGCTaGCATAGGCGATGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: CDVKLRGRNDSSRSTLTSAAGPR*HRRCRP
Trigger: AGGACGACATCGCCTATGGCAGCGTGGTCCTGCAGC...AGATGTCAGGGTTGACCGGCTGCTGTCGTTACGCCCTCGGAGCTTCACATCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp ATGCTGGCTTCTTGCCCACCGCCCACCGTGAGCACCCCAGCTCTGAGCGACGTGCTTCACCACACACAATaGTCCAGGCTCACCTTGAAA +
Preference number: 4 (lower is better)
Translates to: MLASCPPPTVSTPALSDVLHHTQ*SRLTLK
Trigger: TTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTGAAG...CACGTCGCTCAGAGCTGGGGTGCTCACGGTGGGCGGTGGGCAAGAAGCCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp CCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCTCGTAACGCAAAAGGTCTGAAATaGCAGATGAGTCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PRSPVAALTPRAGINPRNAKGLK*QMSPGE
Trigger: CTCACCAGGACTCATCTGCCATTTCAGACCTTTTGC...GTTACGAGGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp GCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGAGGGAAGACAAGACTGCTaGTCAGCGATACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ARLPVRYENLDEVALAAEGRQDC*SAILAS
Trigger: TGAAGCCAGTATCGCTGACCAGCAGTCTTGTCTTCC...CTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR CCA 90 bp TGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGAGATGTTCGGATCTCCATTTGCTaGGCATCCAGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: WAVFSVPDRRFLTLCGDVRISIC*ASSCGH
Trigger: ATGGCCACAGCTGGATGCCCAGCAAATGGAGATCCG...AACATCTCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGATGGCTTCAAACTCTaGAGGCAGGCACTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RRCCASARLPVRYENLDEDGFKL*RQALSL
Trigger: CAGGGACAGTGCCTGCCTCCAGAGTTTGAAGCCATC...CTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp GAGACCCTGGTCACCGCTCCCTCTGTACAGTGTGATGTGAAGCTCCGAGGGCGTAGACTGAACAGGTCCTaGGCATCCCAGACGATGGCT +
Preference number: 4 (lower is better)
Translates to: ETLVTAPSVQCDVKLRGRRLNRS*ASQTMA
Trigger: AGCCATCGTCTGGGATGCCCAGGACCTGTTCAGTCT...ACGCCCTCGGAGCTTCACATCACACTGTACAGAGGGAGCGGTGACCAGGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTAATGGGAAATGGTTTCCGACACCTCCAGGCTaGGGTGCGCCGAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: PRLQKQLFLQLHFNGKWFPTPPG*GAPRPG
Trigger: ACCCGGCCTCGGCGCACCCCAGCCTGGAGGTGTCGG...AAACCATTTCCCATTAAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp CTCGGCGGAAACGTTAAGCCCCGGACACTGCCTCACGTAACTGGGCTGTTTTCTGATGACGGCGGGTTTTaGCACTTGGGCAGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: LGGNVKPRTLPHVTGLFSDDGGF*HLGRCV
Trigger: CACGCACCTGCCCAAGTGCCAAAACCCGCCGTCATC...AGAAAACAGCCCAGTTACGTGAGGCAGTGTCCGGGGCTTAACGTTTCCGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp TGTGATGTGAAGCTCCGAGGGCGTAACGACAGCAGCCGGTCAACCCTGACATCTTGGCAGCAGAGACCCTaGTCACCGCTCCCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: CDVKLRGRNDSSRSTLTSWQQRP*SPLPLY
Trigger: GTACAGAGGGAGCGGTGACCAGGGTCTCTGCTGCCA...AGATGTCAGGGTTGACCGGCTGCTGTCGTTACGCCCTCGGAGCTTCACATCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCTCGTAACGAAAGACTCTCAGGTTaGGGAATGAGGCAGACAGAA +
Preference number: 4 (lower is better)
Translates to: PRSPVAALTPRAGINPRNERLSG*GMRQTE
Trigger: TTCTGTCTGCCTCATTCCCCAACCTGAGAGTCTTTC...GTTACGAGGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR TCA 90 bp GAGACCCTGGTCACCGCTCCCTCTGTACAGTGTGATGTGAAGCTCCGAGGGCGTACAGGTGTACCACATTaGAGGTCTGACTCCGGAACC +
Preference number: 4 (lower is better)
Translates to: ETLVTAPSVQCDVKLRGRTGVPH*RSDSGT
Trigger: GGTTCCGGAGTCAGACCTTCAATGTGGTACACCTGT...ACGCCCTCGGAGCTTCACATCACACTGTACAGAGGGAGCGGTGACCAGGGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp ACCCTGGTCACCGCTCCCTCTGTACAGTGTGATGTGAAGCTCCGAGGGCGTAACAGGCGATGTCGTCCTTaGCCAACTTGGTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TLVTAPSVQCDVKLRGRNRRCRP*PTWSCS
Trigger: GGAACAGGACCAAGTTGGTCAAGGACGACATCGCCT...GTTACGCCCTCGGAGCTTCACATCACACTGTACAGAGGGAGCGGTGACCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp TGCACTAGCCTCCGTGGAAAATGCAGCCGTTCCGCACCTCCGCTTTTGTCCATAGAGGGGATGATGCTGTaGAGCTGCAGGACCACGCTG +
Preference number: 4 (lower is better)
Translates to: CTSLRGKCSRSAPPLLSIEGMML*SCRTTL
Trigger: CAGCGTGGTCCTGCAGCTTCACAGCATCATCCCCTC...TATGGACAAAAGCGGAGGTGCGGAACGGCTGCATTTTCCACGGAGGCTAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGATCTGAGCCTCAGCTaGATGCCTCCTTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RRCCASARLPVRYENLDEDLSLS*MPPSLK
Trigger: CTTCAAGGAAGGAGGCATTCAGCTGAGGCTCAGATC...CTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTCAGATGTTTCCAGACTaGACAGGTCCTGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCQMFPD*TGPGHP
Trigger: GGGATGCCCAGGACCTGTTCAGTCTGGAAACATCTG...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp GCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGAGAGGCCAGGGCACGTGTaGCAGAATTATTTATCCATC +
Preference number: 4 (lower is better)
Translates to: ARLPVRYENLDEVALAAERPGHV*QNYLSI
Trigger: GATGGATAAATAATTCTGTCACACGTGCCCTGGCCT...CTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR TCA 90 bp CTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGCCGCTTTTGTCCATATaGACGATCTTCCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LCGDVAHPPDSLCAMKTWPLLSI*TIFPLP
Trigger: GGGAAGGGGGAAGATCGTTCATATGGACAAAAGCGG...CCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp CCCCGTTCCCCGGTGGCCGCCCTGACACCTCGCGCTGGAATAAACCCTCGTAACGCAAAGGGTGATGATTaGTGTAAAGTGTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: PRSPVAALTPRAGINPRNAKGDD*CKVSWS
Trigger: GGACCAAGACACTTTACAGCAATCATCACCCTTTGC...GTTACGAGGGTTTATTCCAGCGCGAGGTGTCAGGGCGGCCACCGGGGAACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp GCCTCCGTGGAAAATGCAGCCGTTCCGCACCTCCGCTTTTGTCCATATGAACGACCAGGGAGCTCCTGCTaGTCCTGGTACAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: ASVENAAVPHLRFCPYERPGSSC*SWYRCT
Trigger: GGTACACCTGTACCAGGAGCAGCAGGAGCTCCCTGG...TCGTTCATATGGACAAAAGCGGAGGTGCGGAACGGCTGCATTTTCCACGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp CAATCTTCTCAGCATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCCGGAACGCCGGCATCTaGCTGCCAGGGAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QSSQHSEVANPREISTQRRNAGI*LPGSSC
Trigger: GCAGGAGCTCCCTGGCAGGCAGATGCCGGCGTTCCG...GCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAGAAGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR GCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTCCCTTCTTTCTTCCATaGTGGCTTCTTGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCPFFLP*WLLAHR
Trigger: GCGGTGGGCAAGAAGCCAGCATGGAAGAAAGAAGGG...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp TGGAAAATGCAGCCGTTCCGCACCTCCGCTTTTGTCCATATGAACGATCTTCCCACTTGGGCAGGTGCGTaGAGAACGCCCTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: WKMQPFRTSAFVHMNDLPTWAGA*RTPCPR
Trigger: GCGGGGACAGGGCGTTCTGCACGCACCTGCCCAAGT...GGGAAGATCGTTCATATGGACAAAAGCGGAGGTGCGGAACGGCTGCATTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTCGGATCTCCATTTGCTaGGCATCCAGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCRISIC*ASSCGH
Trigger: ATGGCCACAGCTGGATGCCCAGCAAATGGAGATCCG...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTGGGCATCCCAGACGATaGCTTCAAACTCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCGHPRR*LQTLEA
Trigger: TGCCTCCAGAGTTTGAAGCCATCGTCTGGGATGCCC...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp ATGCTGGCTTCTTGCCCACCGCCCACCGTGAGCACCCCAGCTCTGAGCGACGTGAACACGTCTGCTATCTaGACCACCAACTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: MLASCPPPTVSTPALSDVNTSAI*TTNSFF
Trigger: GAAGAAAGAGTTGGTGGTCCAGATAGCAGACGTGTT...CACGTCGCTCAGAGCTGGGGTGCTCACGGTGGGCGGTGGGCAAGAAGCCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTTGGAAGGTGAAGATGTaGGAGCCGTCGGACACGTTG +
Preference number: 4 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCWKVKM*EPSDTL
Trigger: CAACGTGTCCGACGGCTCCCACATCTTCACCTTCCA...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCCGTGGGCCCTGGGCCTaGAGTACGCACAGAGCGCGC +
Preference number: 4 (lower is better)
Translates to: PTIHKRALDLSPFLEENRRGPWA*STHRAR
Trigger: GCGCGCTCTGTGCGTACTTCAGGCCCAGGGCCCACG...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp TCAGTCCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAATGCTCCGAGAACCGCTaGGGGTGGCCAGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: SVPQSTNELWTCLLSLKKCSENR*GWPGAG
Trigger: CCCGGCGCCTGGCCACCCGCAGCGGTTCTCGGAGCA...TTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTAGGCACAGCGGCTCATaGCTGTACACCCAGCATTTT +
Preference number: 4 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCRHSGS*LYTQHF
Trigger: AAAATGCTGGGTGTACAGGCATGAGCCGCTGTGCCT...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp GTACAGTGTGATGTGAAGCTCCGAGGGCGTAACGACAGCAGCCGGTCAACCCTGAGCTCCTGCTGCTCCTaGTACAGGTGTACCACATTG +
Preference number: 4 (lower is better)
Translates to: VQCDVKLRGRNDSSRSTLSSCCS*YRCTTL
Trigger: CAATGTGGTACACCTGTACCAGGAGCAGCAGGAGCT...CAGGGTTGACCGGCTGCTGTCGTTACGCCCTCGGAGCTTCACATCACACTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CTCGGCGGAAACGTTAAGCCCCGGACACTGCCTCACGTAACTGGGCTGTTTTCTAGACTGAACAGGTCCTaGGCATCCCAGACGATGGCT +
Preference number: 4 (lower is better)
Translates to: LGGNVKPRTLPHVTGLFSRLNRS*ASQTMA
Trigger: AGCCATCGTCTGGGATGCCCAGGACCTGTTCAGTCT...AGAAAACAGCCCAGTTACGTGAGGCAGTGTCCGGGGCTTAACGTTTCCGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CTCAGCATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCCGTAAGGACGAAGCACTCAGCCTaGCCTTCAGCCCGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSIQRLQTPEKSPHSAVRTKHSA*PSARLQ
Trigger: CTGGAGACGGGCTGAAGGCCAGGCTGAGTGCTTCGT...CCTTACGGCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
3UTR CAA 72 bp GTCAGTGAGGCCCCTTCGGCCTGGCTCCCTACCCTTTaGCCGGGTTGCCGTCACGTTTTGAGCCTTTATTTT +
Preference number: 4 (lower is better)
Translates to: VSEAPSAWLPTL*PGCRHVLSLYF
Trigger: AAAATAAAGGCTCAAAACGTGACGGCAACCCGGCAAAAGGGTAGGGAGCCAGGCCGAAGGGGCCTCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CCCCAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGGCAGGGCCTAGCACCTTaGCCTCTGAGCTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PQSQLAYTEMLNLLSIQRQGLAP*PLSSAP
Trigger: GGGAGCCGAGCTCAGAGGTCAAGGTGCTAGGCCCTG...CCTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp CTGATGTTCAAATTGTCCCACAATTGGTCAGTGAGGCCCCTTCGGCCTGGCTCCAGGCGATGTCGTCCTTaGCCAACTTGGTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LMFKLSHNWSVRPLRPGSRRCRP*PTWSCS
Trigger: GGAACAGGACCAAGTTGGTCAAGGACGACATCGCCT...GGAGCCAGGCCGAAGGGGCCTCACTGACCAATTGTGGGACAATTTGAACATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp GAGCTGGCAATTTTCAGTAGAGGAAGTCCCCAGAGCCAACTAGCATATACAGAGCCCTCAAGGGAGAGGTaGGGGTCTGAGCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ELAIFSRGSPQSQLAYTEPSRER*GSEPSP
Trigger: AGGGCTGGGCTCAGACCCTCACCTCTCCCTTGAGGG...CTCTGTATATGCTAGTTGGCTCTGGGGACTTCCTCTACTGAAAATTGCCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp TCTGTACAGTGTGATGTGAAGCTCCGAGGGCGTAACGACAGCAGCCGGTCAACCGATCTGAGCCTCAGCTaGATGCCTCCTTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: SVQCDVKLRGRNDSSRSTDLSLS*MPPSLK
Trigger: CTTCAAGGAAGGAGGCATTCAGCTGAGGCTCAGATC...GGTTGACCGGCTGCTGTCGTTACGCCCTCGGAGCTTCACATCACACTGTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp TGCACTAGCCTCCGTGGAAAATGCAGCCGTTCCGCACCTCCGCTTTTGTCCATACCCACAGCCTTTAGATaGCGGCGGGTTTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: CTSLRGKCSRSAPPLLSIPTAFR*RRVLAL
Trigger: AAGTGCCAAAACCCGCCGTCATCTAAAGGCTGTGGG...TATGGACAAAAGCGGAGGTGCGGAACGGCTGCATTTTCCACGGAGGCTAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp AACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGAGATTTACCAAGCTCTGTCTaGAGCTTTTCCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NWAVFSVPDRRFLTLCGDLPSSV*SFSSSA
Trigger: TGCAGAGCTGGAAAAGCTTCAGACAGAGCTTGGTAA...ATCTCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR GCA 90 bp CGACAGCAGCCGGTCAACCCTGACATCTGTGCACTAGCCTCCGTGGAAAATGCATGTCTCTTCTCCGCCTaGTTCCTCAGCTTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: RQQPVNPDICALASVENACLFSA*FLSFSR
Trigger: CCGAGAAAAGCTGAGGAAGCAGGCGGAGAAGAGACA...TGCATTTTCCACGGAGGCTAGTGCACAGATGTCAGGGTTGACCGGCTGCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCCTCAGCGCGCACGTCTaGTCCGAGAACCGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: PTIHKRALDLSPFLEENRLSAHV*SENRCG
Trigger: CCCGCAGCGGTTCTCGGAGCAGACGTGCGCGCTGAG...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp CGACAGCAGCCGGTCAACCCTGACATCTGTGCACTAGCCTCCGTGGAAAATGCAAGCTCCTGCTGCTCCTaGTACAGGTGTACCACATTG +
Preference number: 4 (lower is better)
Translates to: RQQPVNPDICALASVENASSCCS*YRCTTL
Trigger: CAATGTGGTACACCTGTACCAGGAGCAGCAGGAGCT...TGCATTTTCCACGGAGGCTAGTGCACAGATGTCAGGGTTGACCGGCTGCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp TGTGATGTGAAGCTCCGAGGGCGTAACGACAGCAGCCGGTCAACCCTGACATCTGAGAAGTTGTCGGAGTaGAAGCGGCAGCCATATGTG +
Preference number: 4 (lower is better)
Translates to: CDVKLRGRNDSSRSTLTSEKLSE*KRQPYV
Trigger: CACATATGGCTGCCGCTTCCACTCCGACAACTTCTC...AGATGTCAGGGTTGACCGGCTGCTGTCGTTACGCCCTCGGAGCTTCACATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGAGACCCTGAACACGTCTGCTATCTaGACCACCAACTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LPVRYENLDEVALAAETLNTSAI*TTNSFF
Trigger: GAAGAAAGAGTTGGTGGTCCAGATAGCAGACGTGTT...CAGGGTCTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp TGGAAAATGCAGCCGTTCCGCACCTCCGCTTTTGTCCATATGAACGATCTTCCCGATGACGGCGGGTTTTaGCACTTGGGCAGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: WKMQPFRTSAFVHMNDLPDDGGF*HLGRCV
Trigger: CACGCACCTGCCCAAGTGCCAAAACCCGCCGTCATC...GGGAAGATCGTTCATATGGACAAAAGCGGAGGTGCGGAACGGCTGCATTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp TGGAAAATGCAGCCGTTCCGCACCTCCGCTTTTGTCCATATGAACGATCTTCCCTGGCAGCAGAGACCCTaGTCACCGCTCCCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: WKMQPFRTSAFVHMNDLPWQQRP*SPLPLY
Trigger: GTACAGAGGGAGCGGTGACCAGGGTCTCTGCTGCCA...GGGAAGATCGTTCATATGGACAAAAGCGGAGGTGCGGAACGGCTGCATTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp TGGAAAATGCAGCCGTTCCGCACCTCCGCTTTTGTCCATATGAACGATCTTCCCAAAACCTGGACGAGGTaGCGCTGGCAGCAGAGACCC +
Preference number: 4 (lower is better)
Translates to: WKMQPFRTSAFVHMNDLPKTWTR*RWQQRP
Trigger: GGGTCTCTGCTGCCAGCGCCACCTCGTCCAGGTTTT...GGGAAGATCGTTCATATGGACAAAAGCGGAGGTGCGGAACGGCTGCATTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CGACAGCAGCCGGTCAACCCTGACATCTGTGCACTAGCCTCCGTGGAAAATGCAACTGCCTCACGTAACTaGGCTGTTTTCTCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: RQQPVNPDICALASVENATASRN*AVFSVP
Trigger: AGGCACCGAGAAAACAGCCCAGTTACGTGAGGCAGT...TGCATTTTCCACGGAGGCTAGTGCACAGATGTCAGGGTTGACCGGCTGCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CTCAGCATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCCGTAAGGACCACATTGAAGGTCTaGCTCCGGAACCAGCGGATC +
Preference number: 4 (lower is better)
Translates to: LSIQRLQTPEKSPHSAVRTTLKV*LRNQRI
Trigger: GATCCGCTGGTTCCGGAGTCAGACCTTCAATGTGGT...CCTTACGGCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp CTCAGCATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCCGTAAGGCCTTGTCAGAGGGGATaGTGCTGTGAAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSIQRLQTPEKSPHSAVRPCQRG*CCEAAG
Trigger: TCCTGCAGCTTCACAGCATCATCCCCTCTGACAAGG...CCTTACGGCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp CTGATGTTCAAATTGTCCCACAATTGGTCAGTGAGGCCCCTTCGGCCTGGCTCCGATCTGAGCCTCAGCTaGATGCCTCCTTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LMFKLSHNWSVRPLRPGSDLSLS*MPPSLK
Trigger: CTTCAAGGAAGGAGGCATTCAGCTGAGGCTCAGATC...GGAGCCAGGCCGAAGGGGCCTCACTGACCAATTGTGGGACAATTTGAACATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTAATGGGAAATGGTTTCCCACAATTGGTCAGTaGGGCCCCTTCGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PRLQKQLFLQLHFNGKWFPTIGQ*GPFGLA
Trigger: AGCCAGGCCGAAGGGGCCTCACTGACCAATTGTGGG...AAACCATTTCCCATTAAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCTCTCGGCTTCTCCGCTaGTTCCGGAGGACGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PTIHKRALDLSPFLEENRSRLLR*FRRTPS
Trigger: GCTGGGCGTCCTCCGGAAGCAGCGGAGAAGCCGAGA...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp TCAGTCCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAGTGAGCGCGACGCGGTaGGGGGCCAGGACGAAGTAC +
Preference number: 4 (lower is better)
Translates to: SVPQSTNELWTCLLSLKKVSATR*GARTKY
Trigger: GTACTTCGTCCTGGCCCCGCACCGCGTCGCGCTCAC...TTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTGCAAAAGGTCTGAAATaGCAGATGAGTCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCAKGLK*QMSPGE
Trigger: CTCACCAGGACTCATCTGCCATTTCAGACCTTTTGC...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp CTCAGCATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCCGTAAGGAGACTGAACAGGTCCTaGGCATCCCAGACGATGGCT +
Preference number: 4 (lower is better)
Translates to: LSIQRLQTPEKSPHSAVRRLNRS*ASQTMA
Trigger: AGCCATCGTCTGGGATGCCCAGGACCTGTTCAGTCT...CCTTACGGCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp AACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGAGATACCAACTCTTTCTTCTaGCTCAAGAGGAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: NWAVFSVPDRRFLTLCGDTNSFF*LKRRFW
Trigger: CCAGAATCTCCTCTTGAGCCAGAAGAAAGAGTTGGT...ATCTCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CTGACCCTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCAACTCTTTCTTCTaGCTCAAGAGGAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: LTLCGDVAHPPDSLCAMKTNSFF*LKRRFW
Trigger: CCAGAATCTCCTCTTGAGCCAGAAGAAAGAGTTGGT...TTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp CGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGAACACGTCTGCTATCTaGACCACCAACTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RRCCASARLPVRYENLDENTSAI*TTNSFF
Trigger: GAAGAAAGAGTTGGTGGTCCAGATAGCAGACGTGTT...CTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR TCA 90 bp CAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGGTTGACGTGGACTGGCAGCTaGGCTCCAGAGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QSQLAYTEMLNLLSIQRLTWTGS*APEARA
Trigger: TGCCCTGGCCTCTGGAGCTCAGCTGCCAGTCCACGT...CAACCTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp ATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCCGTAAGGCAACACAGGCGATGTCGTCCTTaGCCAACTTGGTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: IQRLQTPEKSPHSAVRQHRRCRP*PTWSCS
Trigger: GGAACAGGACCAAGTTGGTCAAGGACGACATCGCCT...GTGTTGCCTTACGGCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp ATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCCGTAAGGCAACACTGGTGGTCTCTCCACTaGACCTTAGGCTTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: IQRLQTPEKSPHSAVRQHWWSLH*TLGLGY
Trigger: GTACCCCAAGCCTAAGGTTCAGTGGAGAGACCACCA...GTGTTGCCTTACGGCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR GCA 90 bp CCCCAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGGGCTGCAGGACCACGCTaGCATAGGCGATGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: PQSQLAYTEMLNLLSIQRAAGPR*HRRCRP
Trigger: AGGACGACATCGCCTATGGCAGCGTGGTCCTGCAGC...CCTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp CCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTAATGGGAAATGGTTTTCCCTAGACGTGGACTaGCAGCTGAGCTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PRLQKQLFLQLHFNGKWFSLDVD*QLSSRG
Trigger: GCCTCTGGAGCTCAGCTGCCAGTCCACGTCTAGGGA...AAACCATTTCCCATTAAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp TGGAAAATGCAGCCGTTCCGCACCTCCGCTTTTGTCCATATGAACGATCTTCCCGATGGCTTCAAACTCTaGAGGCAGGCACTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: WKMQPFRTSAFVHMNDLPDGFKL*RQALSL
Trigger: CAGGGACAGTGCCTGCCTCCAGAGTTTGAAGCCATC...GGGAAGATCGTTCATATGGACAAAAGCGGAGGTGCGGAACGGCTGCATTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
3UTR CAA 72 bp ACACATACACATCTACGTAGGCAAAGGTCCCTCTCTTaGTCCCCCTCGCTGACATTTTGGCTGGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: THTHLRRQRSLS*SPSLTFWLVHL
Trigger: CAGGTGCACCAGCCAAAATGTCAGCGAGGGGGACAAAGAGAGGGACCTTTGCCTACGTAGATGTGTATGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR CAA 72 bp CACCACACACAATGCTCCAGGCTCACCTTGAAATTTTaGCCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTT +
Preference number: 4 (lower is better)
Translates to: HHTQCSRLTLKF*PRLQKQLFLQL
Trigger: AAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR CAA 72 bp CCCGTCTCTATAACGCACTTAAAATTGGGCATGGTGTaGTGTGCTGAGGTGGGAGGATCACTTGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: PVSITHLKLGMV*CAEVGGSLGPR
Trigger: CCTGGGTCCAAGTGATCCTCCCACCTCAGCACACAACACCATGCCCAATTTTAAGTGCGTTATAGAGACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CAGATGGCACAACAGAAGAAGGAATTCACGATGTTTACCCATGAGGGATTAATCCTCGGCTCCCCAGGCTaGAGGAGGAGGAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: QMAQQKKEFTMFTHEGLILGSPG*RRRRCM
Trigger: CATGCACCTCCTCCTCCTTCAGCCTGGGGAGCCGAG...GATTAATCCCTCATGGGTAAACATCGTGAATTCCTTCTTCTGTTGTGCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp CAATCTTCTCAGCATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCCAGATGTTTCCAGACTaGACAGGTCCTGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: QSSQHSEVANPREISTQRQMFPD*TGPGHP
Trigger: GGGATGCCCAGGACCTGTTCAGTCTGGAAACATCTG...GCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAGAAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR GCA 90 bp CTCGGCGGAAACGTTAAGCCCCGGACACTGCCTCACGTAACTGGGCTGTTTTCTGCAAAGGGTGATGATTaGTGTAAAGTGTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LGGNVKPRTLPHVTGLFSAKGDD*CKVSWS
Trigger: GGACCAAGACACTTTACAGCAATCATCACCCTTTGC...AGAAAACAGCCCAGTTACGTGAGGCAGTGTCCGGGGCTTAACGTTTCCGCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR GCA 90 bp ATTTTCAGTAGAGGAAGTCCCCAGAGCCAACTAGCATATACAGAGATGCTCAATTCTCGGCTTCTCCGCTaGTTCCGGAGGACGCCCAGC +
Preference number: 4 (lower is better)
Translates to: IFSRGSPQSQLAYTEMLNSRLLR*FRRTPS
Trigger: GCTGGGCGTCCTCCGGAAGCAGCGGAGAAGCCGAGA...ATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGGACTTCCTCTACTGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR GCA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTAAGCTTTTCCAGCTCTaGAGTGAGTTTCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCKLFQL*SEFLLS
Trigger: AGACAAGAGAAACTCACTGCAGAGCTGGAAAAGCTT...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp CCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTAATGGGAAATGGTTTGGGAAGACACGCTCTTaGCATCCTCCGACACCTCCA +
Preference number: 4 (lower is better)
Translates to: PRLQKQLFLQLHFNGKWFGKTRS*HPPTPP
Trigger: TGGAGGTGTCGGAGGATGGCAAGAGCGTGTCTTCCC...AAACCATTTCCCATTAAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp GCCTCCGTGGAAAATGCAGCCGTTCCGCACCTCCGCTTTTGTCCATATGAACGAGCAAAAGGTCTGAAATaGCAGATGAGTCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: ASVENAAVPHLRFCPYERAKGLK*QMSPGE
Trigger: CTCACCAGGACTCATCTGCCATTTCAGACCTTTTGC...TCGTTCATATGGACAAAAGCGGAGGTGCGGAACGGCTGCATTTTCCACGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp ACCTTGAAATTTTTGCCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTGCAGTGGGGGCCACCTaGCAGGTAGCAGCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: TLKFLPRLQKQLFLQLHFAVGAT*QVAAKG
Trigger: ACCTTTTGCTGCTACCTGCCAGGTGGCCCCCACTGC...AAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp TCCCCAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGGCAGTGGGGGCCACCTaGCAGGTAGCAGCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: SPEPTSIYRDAQSSQHSEAVGAT*QVAAKG
Trigger: ACCTTTTGCTGCTACCTGCCAGGTGGCCCCCACTGC...CTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp TGGAAAATGCAGCCGTTCCGCACCTCCGCTTTTGTCCATATGAACGATCTTCCCGAGAAGTTGTCGGAGTaGAAGCGGCAGCCATATGTG +
Preference number: 4 (lower is better)
Translates to: WKMQPFRTSAFVHMNDLPEKLSE*KRQPYV
Trigger: CACATATGGCTGCCGCTTCCACTCCGACAACTTCTC...GGGAAGATCGTTCATATGGACAAAAGCGGAGGTGCGGAACGGCTGCATTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp TGCACTAGCCTCCGTGGAAAATGCAGCCGTTCCGCACCTCCGCTTTTGTCCATACTCAAGAGGAGATTCTaGATGGAGACGGACACATTG +
Preference number: 4 (lower is better)
Translates to: CTSLRGKCSRSAPPLLSILKRRF*METDTL
Trigger: CAATGTGTCCGTCTCCATCCAGAATCTCCTCTTGAG...TATGGACAAAAGCGGAGGTGCGGAACGGCTGCATTTTCCACGGAGGCTAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp GCCTCCGTGGAAAATGCAGCCGTTCCGCACCTCCGCTTTTGTCCATATGAACGACTCAAGAGGAGATTCTaGATGGAGACGGACACATTG +
Preference number: 4 (lower is better)
Translates to: ASVENAAVPHLRFCPYERLKRRF*METDTL
Trigger: CAATGTGTCCGTCTCCATCCAGAATCTCCTCTTGAG...TCGTTCATATGGACAAAAGCGGAGGTGCGGAACGGCTGCATTTTCCACGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CCA 90 bp TTGAAGAAAATCGCACTACACATACACATCTACGTAGGCAAAGGTCCCTCTCTTTGTTCGCCGCCGTCGTaGGCCCTGGGCCTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LKKIALHIHIYVGKGPSLCSPPS*ALGLKY
Trigger: GTACTTCAGGCCCAGGGCCCACGACGGCGGCGAACA...AAGAGAGGGACCTTTGCCTACGTAGATGTGTATGTGTAGTGCGATTTTCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGGTTGGGAGTCTGGGGAGACTaGGAGGTCCACCATCTCTCG +
Preference number: 4 (lower is better)
Translates to: QSQLAYTEMLNLLSIQRLGVWGD*EVHHLS
Trigger: CGAGAGATGGTGGACCTCTCAGTCTCCCCAGACTCC...CAACCTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp TTTATTTTACTTCACCACACACAATGCTCCAGGCTCACCTTGAAATTTTTGCCCCTCGGCTCCCCAGGCTaGAGGAGGAGGAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: FILLHHTQCSRLTLKFLPLGSPG*RRRRCM
Trigger: CATGCACCTCCTCCTCCTTCAGCCTGGGGAGCCGAG...GGGCAAAAATTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTGAAGTAAAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp TCAGTCCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAGAGGGGATGATGCTGTaGAGCTGCAGGACCACGCTG +
Preference number: 4 (lower is better)
Translates to: SVPQSTNELWTCLLSLKKEGMML*SCRTTL
Trigger: CAGCGTGGTCCTGCAGCTTCACAGCATCATCCCCTC...TTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTAATGGGAAATGGTTTTGGTGGTCTCTCCACTaGACCTTAGGCTTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: PRLQKQLFLQLHFNGKWFWWSLH*TLGLGY
Trigger: GTACCCCAAGCCTAAGGTTCAGTGGAGAGACCACCA...AAACCATTTCCCATTAAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp TTCACGATGTTTACCCATGAGGGATTAATCTCACACACACACACACACACACACAGACGGACACATTGCTaGGGGCTCCCGCTCGGACAA +
Preference number: 4 (lower is better)
Translates to: FTMFTHEGLISHTHTHTHRRTHC*GLPLGQ
Trigger: TTGTCCGAGCGGGAGCCCTCAGCAATGTGTCCGTCT...GTGTGTGTGTGTGTGTGTGTGTGAGATTAATCCCTCATGGGTAAACATCGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCCTTTGTCCCCCTCGCTaGCATTTTGGCTGGTGCACC +
Preference number: 4 (lower is better)
Translates to: PTIHKRALDLSPFLEENRLCPPR*HFGWCT
Trigger: GGTGCACCAGCCAAAATGTCAGCGAGGGGGACAAAG...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp ACCTTGAAATTTTTGCCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTCAGCGGATCTCCATTTaGTGGGCATCCAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TLKFLPRLQKQLFLQLHFQRISI*WASSCG
Trigger: GCCACAGCTGGATGCCCAGCAAATGGAGATCCGCTG...AAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp TTCACGATGTTTACCCATGAGGGATTAATCTCACACACACACACACACACACACCCAGGGAGCTCCTGCTaGTCCTGGTACAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: FTMFTHEGLISHTHTHTHPGSSC*SWYRCT
Trigger: GGTACACCTGTACCAGGAGCAGCAGGAGCTCCCTGG...GTGTGTGTGTGTGTGTGTGTGTGAGATTAATCCCTCATGGGTAAACATCGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp GAGCTGGCAATTTTCAGTAGAGGAAGTCCCCAGAGCCAACTAGCATATACAGAGGCTGGTCAGCGATACTaGCTTCAAGGAGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ELAIFSRGSPQSQLAYTEAGQRY*LQGVWG
Trigger: TCCCCAGACTCCTTGAAGCCAGTATCGCTGACCAGC...CTCTGTATATGCTAGTTGGCTCTGGGGACTTCCTCTACTGAAAATTGCCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp CAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGGTTGAGCTGTGGCCATAGGTaGCACGGGAACTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: QSQLAYTEMLNLLSIQRLSCGHR*HGNSTS
Trigger: GGAGGTGGAGTTCCCGTGCCACCTATGGCCACAGCT...CAACCTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp AATCTTCTCAGCATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCCAGCTCCTGCTGCTCCTaGTACAGGTGTACCACATTG +
Preference number: 4 (lower is better)
Translates to: NLLSIQRLQTPEKSPHSASSCCS*YRCTTL
Trigger: CAATGTGGTACACCTGTACCAGGAGCAGCAGGAGCT...GGCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAGAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp CCCCAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGGGATGGCTTCAAACTCTaGAGGCAGGCACTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PQSQLAYTEMLNLLSIQRDGFKL*RQALSL
Trigger: CAGGGACAGTGCCTGCCTCCAGAGTTTGAAGCCATC...CCTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCGGCTGCACTCCAGCCTaGCCGACAGAGACAATGTCT +
Preference number: 4 (lower is better)
Translates to: PTIHKRALDLSPFLEENRGCTPA*PTETMS
Trigger: AGACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCC...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp ACCTTGAAATTTTTGCCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTGCAGATGAGTCCTGGTaGGCTCACCTCCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TLKFLPRLQKQLFLQLHFADESW*AHLLCK
Trigger: TTTGCAGAGGAGGTGAGCTCACCAGGACTCATCTGC...AAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CAGATGGCACAACAGAAGAAGGAATTCACGATGTTTACCCATGAGGGATTAATCGAGGGGATGATGCTGTaGAGCTGCAGGACCACGCTG +
Preference number: 4 (lower is better)
Translates to: QMAQQKKEFTMFTHEGLIEGMML*SCRTTL
Trigger: CAGCGTGGTCCTGCAGCTTCACAGCATCATCCCCTC...GATTAATCCCTCATGGGTAAACATCGTGAATTCCTTCTTCTGTTGTGCCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp TTGAAGAAAATCGCACTACACATACACATCTACGTAGGCAAAGGTCCCTCTCTTAGCCGTCGGACACGTTaGAGAAGGACAGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LKKIALHIHIYVGKGPSLSRRTR*RRTALR
Trigger: CCGGAGAGCTGTCCTTCTTCAACGTGTCCGACGGCT...AAGAGAGGGACCTTTGCCTACGTAGATGTGTATGTGTAGTGCGATTTTCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp TCAGTCCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAATTTGGCTGGTGCACCTaGTCCCTTCAGACGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SVPQSTNELWTCLLSLKKFGWCT*SLQTEQ
Trigger: CTGCTCCGTCTGAAGGGAGCAGGTGCACCAGCCAAA...TTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp ATTTTCAGTAGAGGAAGTCCCCAGAGCCAACTAGCATATACAGAGATGCTCAATTCCCTAGACGTGGACTaGCAGCTGAGCTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: IFSRGSPQSQLAYTEMLNSLDVD*QLSSRG
Trigger: GCCTCTGGAGCTCAGCTGCCAGTCCACGTCTAGGGA...ATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGGACTTCCTCTACTGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp ACCTTGAAATTTTTGCCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTGCTGGTCAGCGATACTaGCTTCAAGGAGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TLKFLPRLQKQLFLQLHFAGQRY*LQGVWG
Trigger: TCCCCAGACTCCTTGAAGCCAGTATCGCTGACCAGC...AAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp CCCCAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGGGAGAAGTTGTCGGAGTaGAAGCGGCAGCCATATGTG +
Preference number: 4 (lower is better)
Translates to: PQSQLAYTEMLNLLSIQREKLSE*KRQPYV
Trigger: CACATATGGCTGCCGCTTCCACTCCGACAACTTCTC...CCTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp ATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCCGTAAGGCAACACCTCAAGAGGAGATTCTaGATGGAGACGGACACATTG +
Preference number: 4 (lower is better)
Translates to: IQRLQTPEKSPHSAVRQHLKRRF*METDTL
Trigger: CAATGTGTCCGTCTCCATCCAGAATCTCCTCTTGAG...GTGTTGCCTTACGGCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp TTTATTTTACTTCACCACACACAATGCTCCAGGCTCACCTTGAAATTTTTGCCCGCTCTCCACTCAGCCTaGCCTTCAGCCCGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: FILLHHTQCSRLTLKFLPALHSA*PSARLQ
Trigger: CTGGAGACGGGCTGAAGGCCAGGCTGAGTGGAGAGC...GGGCAAAAATTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTGAAGTAAAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp TCAGTCCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAGTACACCCAGCATTTTaGGAGGCCCAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SVPQSTNELWTCLLSLKKVHPAF*EAQVGG
Trigger: TCCTCCCACCTGGGCCTCCCAAAATGCTGGGTGTAC...TTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp TCCCCAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGCTCCAGGAGGGTGGCTaGCTAAAACGAAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: SPEPTSIYRDAQSSQHSELQEGG*LKRSTQ
Trigger: CTGAGTGCTTCGTTTTAGCCAGCCACCCTCCTGGAG...CTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376841.6
3UTR CAA 72 bp TGGCTCCCTACCCTTTTGCCGGGTTGCCGTCACGTTTaGAGCCTTTATTTTACTTCACCACACACAATGCTC +
Preference number: 4 (lower is better)
Translates to: WLPTLLPGCRHV*SLYFTSPHTML
Trigger: GAGCATTGTGTGTGGTGAAGTAAAATAAAGGCTCAAAACGTGACGGCAACCCGGCAAAAGGGTAGGGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR CAA 72 bp CAAAGTGAGACCCCCGTCTCTATAACGCACTTAAAATaGGGCATGGTGTTGTGTGCTGAGGTGGGAGGATCA +
Preference number: 4 (lower is better)
Translates to: QSETPVSITHLK*GMVLCAEVGGS
Trigger: TGATCCTCCCACCTCAGCACACAACACCATGCCCAATTTTAAGTGCGTTATAGAGACGGGGGTCTCACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp TCAGTCCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAACCTTGTCAGAGGGGATaGTGCTGTGAAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SVPQSTNELWTCLLSLKKPCQRG*CCEAAG
Trigger: TCCTGCAGCTTCACAGCATCATCCCCTCTGACAAGG...TTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp TCAGTCCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAGAATGCCTCCTTCCTTaGAGCCCTCAAGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SVPQSTNELWTCLLSLKKECLLP*SPQGRG
Trigger: ACCTCTCCCTTGAGGGCTTCAAGGAAGGAGGCATTC...TTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGGTTGGAATGCCTCCTTCCTTaGAGCCCTCAAGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QSQLAYTEMLNLLSIQRLECLLP*SPQGRG
Trigger: ACCTCTCCCTTGAGGGCTTCAAGGAAGGAGGCATTC...CAACCTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp CCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTAATGGGAAATGGTTTCAGTCAAGCTCTGTCTaGAGCTTTTCCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PRLQKQLFLQLHFNGKWFQSSSV*SFSSSA
Trigger: TGCAGAGCTGGAAAAGCTTCAGACAGAGCTTGACTG...AAACCATTTCCCATTAAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CTGATGTTCAAATTGTCCCACAATTGGTCAGTGAGGCCCCTTCGGCCTGGCTCCACATTGATAGTACAATaGACATCTGTCGACCAGTCA +
Preference number: 4 (lower is better)
Translates to: LMFKLSHNWSVRPLRPGSTLIVQ*TSVDQS
Trigger: TGACTGGTCGACAGATGTTCATTGTACTATCAATGT...GGAGCCAGGCCGAAGGGGCCTCACTGACCAATTGTGGGACAATTTGAACATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CAATCTTCTCAGCATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCAGGCCAGGGCACGTGTaGCAGAATTATTTATCCATC +
Preference number: 4 (lower is better)
Translates to: QSSQHSEVANPREISTQRRPGHV*QNYLSI
Trigger: GATGGATAAATAATTCTGTCACACGTGCCCTGGCCT...GCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAGAAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR GCA 90 bp TTTATTTTACTTCACCACACACAATGCTCCAGGCTCACCTTGAAATTTTTGCCCGCTGCAGGACCACGCTaGCATAGGCGATGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: FILLHHTQCSRLTLKFLPAAGPR*HRRCRP
Trigger: AGGACGACATCGCCTATGGCAGCGTGGTCCTGCAGC...GGGCAAAAATTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTGAAGTAAAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp TCCCCAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGTGTCTCTTCTCCGCCTaGTTCCTCAGCTTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: SPEPTSIYRDAQSSQHSECLFSA*FLSFSR
Trigger: CCGAGAAAAGCTGAGGAAGCAGGCGGAGAAGAGACA...CTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCAGCTCCTGCTGCTCCTaGTACAGGTGTACCACATTG +
Preference number: 4 (lower is better)
Translates to: PTIHKRALDLSPFLEENRSSCCS*YRCTTL
Trigger: CAATGTGGTACACCTGTACCAGGAGCAGCAGGAGCT...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp ACCTTGAAATTTTTGCCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTGAGAAGTTGTCGGAGTaGAAGCGGCAGCCATATGTG +
Preference number: 4 (lower is better)
Translates to: TLKFLPRLQKQLFLQLHFEKLSE*KRQPYV
Trigger: CACATATGGCTGCCGCTTCCACTCCGACAACTTCTC...AAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp ATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCCGTAAGGCAACACACCAACTCTTTCTTCTaGCTCAAGAGGAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: IQRLQTPEKSPHSAVRQHTNSFF*LKRRFW
Trigger: CCAGAATCTCCTCTTGAGCCAGAAGAAAGAGTTGGT...GTGTTGCCTTACGGCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp TTGAAGAAAATCGCACTACACATACACATCTACGTAGGCAAAGGTCCCTCTCTTCCCTCGCTGACATTTTaGCTGGTGCACCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LKKIALHIHIYVGKGPSLPSLTF*LVHLLP
Trigger: AGGGAGCAGGTGCACCAGCCAAAATGTCAGCGAGGG...AAGAGAGGGACCTTTGCCTACGTAGATGTGTATGTGTAGTGCGATTTTCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp TTGAAGAAAATCGCACTACACATACACATCTACGTAGGCAAAGGTCCCTCTCTTACCACATTGAAGGTCTaGCTCCGGAACCAGCGGATC +
Preference number: 4 (lower is better)
Translates to: LKKIALHIHIYVGKGPSLTTLKV*LRNQRI
Trigger: GATCCGCTGGTTCCGGAGTCAGACCTTCAATGTGGT...AAGAGAGGGACCTTTGCCTACGTAGATGTGTATGTGTAGTGCGATTTTCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp TCAGTCCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAACAGGTGTACCACATTaGAGGTCTGACTCCGGAACC +
Preference number: 4 (lower is better)
Translates to: SVPQSTNELWTCLLSLKKTGVPH*RSDSGT
Trigger: GGTTCCGGAGTCAGACCTTCAATGTGGTACACCTGT...TTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp TTTATTTTACTTCACCACACACAATGCTCCAGGCTCACCTTGAAATTTTTGCCCGCTCCAGGCTCACCTTaGAATTTTTGCCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: FILLHHTQCSRLTLKFLPAPGSP*NFCPGS
Trigger: GGAGCCGGGGCAAAAATTTCAAGGTGAGCCTGGAGC...GGGCAAAAATTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTGAAGTAAAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp CAATCTTCTCAGCATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCGCAAAGGGTGATGATTaGTGTAAAGTGTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: QSSQHSEVANPREISTQRAKGDD*CKVSWS
Trigger: GGACCAAGACACTTTACAGCAATCATCACCCTTTGC...GCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAGAAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp ACCTTGAAATTTTTGCCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTGGAAGACAAGACTGCTaGTCAGCGATACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TLKFLPRLQKQLFLQLHFGRQDC*SAILAS
Trigger: TGAAGCCAGTATCGCTGACCAGCAGTCTTGTCTTCC...AAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp ATTTTCAGTAGAGGAAGTCCCCAGAGCCAACTAGCATATACAGAGATGCTCAATCGGATCTCCATTTGCTaGGCATCCAGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: IFSRGSPQSQLAYTEMLNRISIC*ASSCGH
Trigger: ATGGCCACAGCTGGATGCCCAGCAAATGGAGATCCG...ATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGGACTTCCTCTACTGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp CAGATGGCACAACAGAAGAAGGAATTCACGATGTTTACCCATGAGGGATTAATCGGGCATCCCAGACGATaGCTTCAAACTCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: QMAQQKKEFTMFTHEGLIGHPRR*LQTLEA
Trigger: TGCCTCCAGAGTTTGAAGCCATCGTCTGGGATGCCC...GATTAATCCCTCATGGGTAAACATCGTGAATTCCTTCTTCTGTTGTGCCATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCTCCACTGCATATTTTTaGGCTGCTCTCCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: PTIHKRALDLSPFLEENRSTAYF*AALHSA
Trigger: GGCTGAGTGGAGAGCAGCCCAAAAATATGCAGTGGA...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp CTCAGCATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCCGTAAGGAAAGCTAATGGCAGATaGCACAACAGAAGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LSIQRLQTPEKSPHSAVRKANGR*HNRRRN
Trigger: ATTCCTTCTTCTGTTGTGCCATCTGCCATTAGCTTT...CCTTACGGCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp ATTTTCAGTAGAGGAAGTCCCCAGAGCCAACTAGCATATACAGAGATGCTCAATACAGGTGTACCACATTaGAGGTCTGACTCCGGAACC +
Preference number: 4 (lower is better)
Translates to: IFSRGSPQSQLAYTEMLNTGVPH*RSDSGT
Trigger: GGTTCCGGAGTCAGACCTTCAATGTGGTACACCTGT...ATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGGACTTCCTCTACTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp CAGATGGCACAACAGAAGAAGGAATTCACGATGTTTACCCATGAGGGATTAATCGATCTGAGCCTCAGCTaGATGCCTCCTTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: QMAQQKKEFTMFTHEGLIDLSLS*MPPSLK
Trigger: CTTCAAGGAAGGAGGCATTCAGCTGAGGCTCAGATC...GATTAATCCCTCATGGGTAAACATCGTGAATTCCTTCTTCTGTTGTGCCATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp CAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGGTTGCAGTCAAGCTCTGTCTaGAGCTTTTCCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QSQLAYTEMLNLLSIQRLQSSSV*SFSSSA
Trigger: TGCAGAGCTGGAAAAGCTTCAGACAGAGCTTGACTG...CAACCTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp TTCACGATGTTTACCCATGAGGGATTAATCTCACACACACACACACACACACACGGAAGACAAGACTGCTaGTCAGCGATACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: FTMFTHEGLISHTHTHTHGRQDC*SAILAS
Trigger: TGAAGCCAGTATCGCTGACCAGCAGTCTTGTCTTCC...GTGTGTGTGTGTGTGTGTGTGTGAGATTAATCCCTCATGGGTAAACATCGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp TTTATTTTACTTCACCACACACAATGCTCCAGGCTCACCTTGAAATTTTTGCCCAGACTGAACAGGTCCTaGGCATCCCAGACGATGGCT +
Preference number: 4 (lower is better)
Translates to: FILLHHTQCSRLTLKFLPRLNRS*ASQTMA
Trigger: AGCCATCGTCTGGGATGCCCAGGACCTGTTCAGTCT...GGGCAAAAATTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTGAAGTAAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp CAATCTTCTCAGCATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCGTCAGTGATGTGAGCTaGCAATTTTCAGTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: QSSQHSEVANPREISTQRVSDVS*QFSVEE
Trigger: TTCCTCTACTGAAAATTGCCAGCTCACATCACTGAC...GCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAGAAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376841.6
3UTR CAA 72 bp TATACAGAGATGCTCAATCTTCTCAGCATTCAGAGGTaGCAAACCCCAGAGAAATCTCCACACAGCGCCGTA +
Preference number: 4 (lower is better)
Translates to: YTEMLNLLSIQR*QTPEKSPHSAV
Trigger: TACGGCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAGAAGATTGAGCATCTCTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp TCCCCAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGTTTCCAGCTCTGCAGTaGGTTTCTCTTGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SPEPTSIYRDAQSSQHSEFPALQ*VSLVSS
Trigger: AGAAGAGACAAGAGAAACTCACTGCAGAGCTGGAAA...CTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR GCA 90 bp TTTATTTTACTTCACCACACACAATGCTCCAGGCTCACCTTGAAATTTTTGCCCTGTCTCTTCTCCGCCTaGTTCCTCAGCTTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: FILLHHTQCSRLTLKFLPCLFSA*FLSFSR
Trigger: CCGAGAAAAGCTGAGGAAGCAGGCGGAGAAGAGACA...GGGCAAAAATTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTGAAGTAAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp CCCCAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGGAAGCTTTTCCAGCTCTaGAGTGAGTTTCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: PQSQLAYTEMLNLLSIQRKLFQL*SEFLLS
Trigger: AGACAAGAGAAACTCACTGCAGAGCTGGAAAAGCTT...CCTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR GCA 90 bp TCAGTCCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAACAGCGTCACATCCACTaGATATTTTTGGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SVPQSTNELWTCLLSLKKQRHIH*IFLGCS
Trigger: AGAGCAGCCCAAAAATATGCAGTGGATGTGACGCTG...TTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp CCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTAATGGGAAATGGTTTTGCTGTAAAGTGTCTTaGTCCCAGATGCTAAGATTC +
Preference number: 4 (lower is better)
Translates to: PRLQKQLFLQLHFNGKWFCCKVS*SQMLRF
Trigger: GAATCTTAGCATCTGGGACCAAGACACTTTACAGCA...AAACCATTTCCCATTAAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp TTCACGATGTTTACCCATGAGGGATTAATCTCACACACACACACACACACACACGCAAAAGGTCTGAAATaGCAGATGAGTCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: FTMFTHEGLISHTHTHTHAKGLK*QMSPGE
Trigger: CTCACCAGGACTCATCTGCCATTTCAGACCTTTTGC...GTGTGTGTGTGTGTGTGTGTGTGAGATTAATCCCTCATGGGTAAACATCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCTCCACAAACGAGCTTTaGACTTGTCTCCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: PTIHKRALDLSPFLEENRSTNEL*TCLLSL
Trigger: CAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGA...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR CAA 72 bp TCGCTCAGTCCCACAATCCACAAACGAGCTTTGGACTaGTCTCCTTTCCTTGAAGAAAATCGCACTACACAT +
Preference number: 4 (lower is better)
Translates to: SLSPTIHKRALD*SPFLEENRTTH
Trigger: ATGTGTAGTGCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp ACCTTGAAATTTTTGCCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTGTTGCCGTCACGTTTTaGGCCTTTATTTTACTTCAC +
Preference number: 4 (lower is better)
Translates to: TLKFLPRLQKQLFLQLHFVAVTF*AFILLH
Trigger: GTGAAGTAAAATAAAGGCTCAAAACGTGACGGCAAC...AAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp GAGCTGGCAATTTTCAGTAGAGGAAGTCCCCAGAGCCAACTAGCATATACAGAGACACGTTTGAGACTATaGATTCAGTGTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: ELAIFSRGSPQSQLAYTETRLRL*IQCCCG
Trigger: TCCACAACAACACTGAATGCATAGTCTCAAACGTGT...CTCTGTATATGCTAGTTGGCTCTGGGGACTTCCTCTACTGAAAATTGCCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR GCA 90 bp GAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGGTTGCATCAGCATTCAGAGGTTaGAAACCCCAGAGAAATCTC +
Preference number: 4 (lower is better)
Translates to: EPTSIYRDAQSSQHSEVASAFRG*KPQRNL
Trigger: GAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGA...TGCAACCTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CCA 90 bp TTGAAGAAAATCGCACTACACATACACATCTACGTAGGCAAAGGTCCCTCTCTTCTCAAGAGGAGATTCTaGATGGAGACGGACACATTG +
Preference number: 4 (lower is better)
Translates to: LKKIALHIHIYVGKGPSLLKRRF*METDTL
Trigger: CAATGTGTCCGTCTCCATCCAGAATCTCCTCTTGAG...AAGAGAGGGACCTTTGCCTACGTAGATGTGTATGTGTAGTGCGATTTTCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp TTCACGATGTTTACCCATGAGGGATTAATCTCACACACACACACACACACACACAACACGTCTGCTATCTaGACCACCAACTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: FTMFTHEGLISHTHTHTHNTSAI*TTNSFF
Trigger: GAAGAAAGAGTTGGTGGTCCAGATAGCAGACGTGTT...GTGTGTGTGTGTGTGTGTGTGTGAGATTAATCCCTCATGGGTAAACATCGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR TCA 90 bp TTGAAGAAAATCGCACTACACATACACATCTACGTAGGCAAAGGTCCCTCTCTTTTTCCAGCTCTGCAGTaGGTTTCTCTTGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LKKIALHIHIYVGKGPSLFPALQ*VSLVSS
Trigger: AGAAGAGACAAGAGAAACTCACTGCAGAGCTGGAAA...AAGAGAGGGACCTTTGCCTACGTAGATGTGTATGTGTAGTGCGATTTTCTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp TTGAAGAAAATCGCACTACACATACACATCTACGTAGGCAAAGGTCCCTCTCTTACCAACTCTTTCTTCTaGCTCAAGAGGAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: LKKIALHIHIYVGKGPSLTNSFF*LKRRFW
Trigger: CCAGAATCTCCTCTTGAGCCAGAAGAAAGAGTTGGT...AAGAGAGGGACCTTTGCCTACGTAGATGTGTATGTGTAGTGCGATTTTCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CCA 90 bp TCAGTCCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAATTTCCACTTAGTCACTaGAAATTCAGTGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: SVPQSTNELWTCLLSLKKFPLSH*KFSGRH
Trigger: GTGTCTGCCACTGAATTTCCAGTGACTAAGTGGAAA...TTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp TTGAAGAAAATCGCACTACACATACACATCTACGTAGGCAAAGGTCCCTCTCTTCTTGTCTCCTTTCCTTaGAGAAAATCGCACTACACA +
Preference number: 4 (lower is better)
Translates to: LKKIALHIHIYVGKGPSLLVSFP*RKSHYT
Trigger: TGTGTAGTGCGATTTTCTTCAAGGAAAGGAGACAAG...AAGAGAGGGACCTTTGCCTACGTAGATGTGTATGTGTAGTGCGATTTTCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCTGTCATTATTCATCCTaGTGTTCAAATTGTCCCACA +
Preference number: 4 (lower is better)
Translates to: PTIHKRALDLSPFLEENRCHYSS*CSNCPT
Trigger: TGTGGGACAATTTGAACATCAGGATGAATAATGACA...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR TCA 90 bp CAGATGGCACAACAGAAGAAGGAATTCACGATGTTTACCCATGAGGGATTAATCGTAAGGCAACACGTTTaGGACTATGCATTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: QMAQQKKEFTMFTHEGLIVRQHV*DYAFSV
Trigger: AACACTGAATGCATAGTCTCAAACGTGTTGCCTTAC...GATTAATCCCTCATGGGTAAACATCGTGAATTCCTTCTTCTGTTGTGCCATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR GCA 90 bp TTTATTTTACTTCACCACACACAATGCTCCAGGCTCACCTTGAAATTTTTGCCCGCAAAGGGTGATGATTaGTGTAAAGTGTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: FILLHHTQCSRLTLKFLPAKGDD*CKVSWS
Trigger: GGACCAAGACACTTTACAGCAATCATCACCCTTTGC...GGGCAAAAATTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTGAAGTAAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR CAA 72 bp CAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTaGAAGAAAATCGCACTACACATACACATCTACGTA +
Preference number: 4 (lower is better)
Translates to: QSTNELWTCLLS*KKIALHIHIYV
Trigger: TACGTAGATGTGTATGTGTAGTGCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR GCA 90 bp TCAGTCCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAACCCAACTCTTAGTTTaGAAAATTTCAAACCCACAG +
Preference number: 4 (lower is better)
Translates to: SVPQSTNELWTCLLSLKKTQLLV*KISNPQ
Trigger: CTGTGGGTTTGAAATTTTGCAAACTAAGAGTTGGGT...TTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR CAA 72 bp CCAGTTGTCAAACTAATAATGTCCTTGGTCCCATCATaGATGATGTTAAATTTAATCACTTGGATGATCTGG +
Preference number: 4 (lower is better)
Translates to: PVVKLIMSLVPS*MMLNLITWMIW
Trigger: CCAGATCATCCAAGTGATTAAATTTAACATCATCAATGATGGGACCAAGGACATTATTAGTTTGACAACTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
3UTR CAA 72 bp ACACTTCTTTCCCCAGTTGTCAAACTAATAATGTCCTaGGTCCCATCATTGATGATGTTAAATTTAATCACT +
Preference number: 4 (lower is better)
Translates to: TLLSPVVKLIMS*VPSLMMLNLIT
Trigger: AGTGATTAAATTTAACATCATCAATGATGGGACCAAGGACATTATTAGTTTGACAACTGGGGAAAGAAGTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS GCA 90 bp CGTGTCGGTCCAGGCGCCGCTGAGCACCGAGAGGCGAGACCGGCCTaGCCGCCGCGTGCCGGGAAACCTCCCGCGGGACCTTCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: RVGPGAAEHREARPA*PPRAGKPPAGPSPG
Trigger: GCCCGGAGAAGGTCCCGCGGGAGGTTTCCCGGCACGCGGCGGGCAGGCCGGTCTCGCCTCTCGGTGCTCAGCGGCGCCTGGACCGACACG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509395.1
CDS TCA 90 bp CGTAGTCCAGGAAGACGCCCAGGCGCCGCGGGGGCACGCGCAGGGTaGGCGCGACGCGGTGCGGGGCCAGGACGAAGTACTCGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: RSPGRRPGAAGARAG*ARRGAGPGRSTRSR
Trigger: ACGGCTGCGAGTACTTCGTCCTGGCCCCGCACCGCGTCGCGCTCACCCTGCGCGTGCCCCCGCGGCGCCTGGGCGTCTTCCTGGACTACG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS CCA 90 bp GCACGTCTGCTCCGAGAACCGCTGCGGGTGGCCAGGCGCCGGGCCTaGCGGCGCCCCGCGGGAAGACACGCTCTTGCCATCCTCCGACAC +
Preference number: 5 (lower is better)
Translates to: ARLLREPLRVARRRA*RRPAGRHALAILRH
Trigger: GTGTCGGAGGATGGCAAGAGCGTGTCTTCCCGCGGGGCGCCGCCAGGCCCGGCGCCTGGCCACCCGCAGCGGTTCTCGGAGCAGACGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS CCA 90 bp GGCAGCGGGCAGATGGTCAGGGGATCCGGATGTTCGCCGCCGTCGTaGGCCCTGGGCCTGAAGTACGCACAGAGCGCGCCCGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GSGQMVRGSGCSPPS*ALGLKYAQSAPEKV
Trigger: CACCTTCTCGGGCGCGCTCTGTGCGTACTTCAGGCCCAGGGCCCACGACGGCGGCGAACATCCGGATCCCCTGACCATCTGCCCGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS CCA 90 bp GACGAACGCGCTCTTCCACGCAGAGGCTCCGGGTACGAACACGTCTaGAAAACACCCGCGGGGGCCGTGTCGGTCCAGGCGCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: DERALPRRGSGYEHV*KTPAGAVSVQAPLS
Trigger: GCTCAGCGGCGCCTGGACCGACACGGCCCCCGCGGGTGTTTTCCAGACGTGTTCGTACCCGGAGCCTCTGCGTGGAAGAGCGCGTTCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509395.1
ENST00000511056.1
CDS-3UTR CAA 90 bp GTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTCAGGGCCTAGCACCTaGACCTCTGAGCTCGGCTCC +
Preference number: 5 (lower is better)
Translates to: VAHPPDSLCAMKTWTRWRSGPST*TSELGS
Trigger: GGAGCCGAGCTCAGAGGTCAAGGTGCTAGGCCCTGA...GCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR CAA 90 bp CGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGCCCTGTGCGGAGATGTaGCGCATCCGCCCGACTCCC +
Preference number: 5 (lower is better)
Translates to: RRCCASARLPVRYENLDEPCAEM*RIRPTP
Trigger: GGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGG...CTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CAA 90 bp CTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGAGACCCTGGGCGGGTTTTGGCACTaGGGCAGGTGCGTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: LPVRYENLDEVALAAETLGGFWH*GRCVQN
Trigger: GTTCTGCACGCACCTGCCCAAGTGCCAAAACCCGCC...CAGGGTCTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS GCA 90 bp GACCCACAGCCTTTAGATGACGGCGGGTTTTGGCACTTGGGCAGGTaGGTGCAGAACGCCCTGTCCCCGCTCACCTTGTCTCTTCTCCGC +
Preference number: 5 (lower is better)
Translates to: DPQPLDDGGFWHLGR*VQNALSPLTLSLLR
Trigger: GCGGAGAAGAGACAAGGTGAGCGGGGACAGGGCGTTCTGCACGCACCTGCCCAAGTGCCAAAACCCGCCGTCATCTAAAGGCTGTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491209.5
ENST00000509395.1
ENST00000511589.1
ENST00000515271.1
CDS CCA 90 bp TACGCACAGAGCGCGCCCGAGAAGGTGTCGTGGAAGGTGAAGATGTaGGAGCCGTCGGACACGTTGAAGAAGGACAGCTCTCCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: YAQSAPEKVSWKVKM*EPSDTLKKDSSPAS
Trigger: CGAGGCCGGAGAGCTGTCCTTCTTCAACGTGTCCGACGGCTCCCACATCTTCACCTTCCACGACACCTTCTCGGGCGCGCTCTGTGCGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp CTCCCTGTGCGCTATGAAAACCTGGACGAGGTGGCGCTGGCAGCAGAGACCCTGGCTTCGCCAGAGAAGTaGTCGGAGTGGAAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: LPVRYENLDEVALAAETLASPEK*SEWKRQ
Trigger: CTGCCGCTTCCACTCCGACAACTTCTCTGGCGAAGC...CAGGGTCTCTGCTGCCAGCGCCACCTCGTCCAGGTTTTCATAGCGCACAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CAA 90 bp CTGTGCGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGATGGAGACGGACACATaGCTGAGGGCTCCCGCTCGG +
Preference number: 5 (lower is better)
Translates to: LCGDVAHPPDSLCAMKTWMETDT*LRAPAR
Trigger: CCGAGCGGGAGCCCTCAGCAATGTGTCCGTCTCCAT...CCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CAA 90 bp GAGACCCTGGTCACCGCTCCCTCTGTACAGTGTGATGTGAAGCTCCGAGGGCGTGGCGGGTTTTGGCACTaGGGCAGGTGCGTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: ETLVTAPSVQCDVKLRGRGGFWH*GRCVQN
Trigger: GTTCTGCACGCACCTGCCCAAGTGCCAAAACCCGCC...ACGCCCTCGGAGCTTCACATCACACTGTACAGAGGGAGCGGTGACCAGGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CAA 90 bp TCTGTACAGTGTGATGTGAAGCTCCGAGGGCGTAACGACAGCAGCCGGTCAACCCCCTGTGCGGAGATGTaGCGCATCCGCCCGACTCCC +
Preference number: 5 (lower is better)
Translates to: SVQCDVKLRGRNDSSRSTPCAEM*RIRPTP
Trigger: GGGAGTCGGGCGGATGCGCAACATCTCCGCACAGGG...GGTTGACCGGCTGCTGTCGTTACGCCCTCGGAGCTTCACATCACACTGTACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CAA 90 bp ATGCTGGCTTCTTGCCCACCGCCCACCGTGAGCACCCCAGCTCTGAGCGACGTGCAAATTGTCCCACAATaGGTCAGTGAGGCCCCTTCG +
Preference number: 5 (lower is better)
Translates to: MLASCPPPTVSTPALSDVQIVPQ*VSEAPS
Trigger: CGAAGGGGCCTCACTGACCAATTGTGGGACAATTTG...CACGTCGCTCAGAGCTGGGGTGCTCACGGTGGGCGGTGGGCAAGAAGCCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp CGGAGATGTTGCGCATCCGCCCGACTCCCTGTGCGCTATGAAAACCTGGACGAGCTGTCCCCGCTCACCTaGTCTCTTCTCCGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: RRCCASARLPVRYENLDELSPLT*SLLRLL
Trigger: AAGCAGGCGGAGAAGAGACAAGGTGAGCGGGGACAG...CTCGTCCAGGTTTTCATAGCGCACAGGGAGTCGGGCGGATGCGCAACATCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CAA 90 bp GTACAGTGTGATGTGAAGCTCCGAGGGCGTAACGACAGCAGCCGGTCAACCCTGGGGAAGTGCGCACCCTaGGCTGCCCTTCTGCATAGG +
Preference number: 5 (lower is better)
Translates to: VQCDVKLRGRNDSSRSTLGKCAP*AALLHR
Trigger: CCTATGCAGAAGGGCAGCCAAGGGTGCGCACTTCCC...CAGGGTTGACCGGCTGCTGTCGTTACGCCCTCGGAGCTTCACATCACACTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS TCA 90 bp AAGACTGCTGGTCAGCGATACTGGCTTCAAGGAGTCTGGGGAGACTaGGAGGTCCACCATCTCTCGTCAGCAGTGGGGGCCACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: KTAGQRYWLQGVWGD*EVHHLSSAVGATWQ
Trigger: CTGCCAGGTGGCCCCCACTGCTGACGAGAGATGGTGGACCTCTCAGTCTCCCCAGACTCCTTGAAGCCAGTATCGCTGACCAGCAGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000513424.1
CDS GCA 90 bp ATGTCGTCCTTGACCAACTTGGTCCTGTTCCGGAACGCCGGCATCTaGCTGCCAGGGAGCTCCTGCTGCTCCTGGTACAGGTGTACCACA +
Preference number: 5 (lower is better)
Translates to: MSSLTNLVLFRNAGI*LPGSSCCSWYRCTT
Trigger: TGTGGTACACCTGTACCAGGAGCAGCAGGAGCTCCCTGGCAGGCAGATGCCGGCGTTCCGGAACAGGACCAAGTTGGTCAAGGACGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CAA 90 bp GAGACCCTGGTCACCGCTCCCTCTGTACAGTGTGATGTGAAGCTCCGAGGGCGTTCGTCCTTGACCAACTaGGTCCTGTTCCGGAACGCC +
Preference number: 5 (lower is better)
Translates to: ETLVTAPSVQCDVKLRGRSSLTN*VLFRNA
Trigger: GGCGTTCCGGAACAGGACCAAGTTGGTCAAGGACGA...ACGCCCTCGGAGCTTCACATCACACTGTACAGAGGGAGCGGTGACCAGGGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CAA 90 bp AACTGGGCTGTTTTCTCGGTGCCTGACCGCCGCTTCCTGACCCTGTGCGGAGATTCGTCCTTGACCAACTaGGTCCTGTTCCGGAACGCC +
Preference number: 5 (lower is better)
Translates to: NWAVFSVPDRRFLTLCGDSSLTN*VLFRNA
Trigger: GGCGTTCCGGAACAGGACCAAGTTGGTCAAGGACGA...ATCTCCGCACAGGGTCAGGAAGCGGCGGTCAGGCACCGAGAAAACAGCCCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CAA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTGAGCCGTCGGACACGTaGAAGAAGGACAGCTCTCCG +
Preference number: 5 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCEPSDT*KKDSSP
Trigger: CGGAGAGCTGTCCTTCTTCAACGTGTCCGACGGCTC...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS TCA 90 bp GCCTGCCAGGGAGCTCCTGCTGCTCCTGGTACAGGTGTACCACATTaGAGGTCTGACTCCGGAACCAGCGGATCTCCATTTGCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: ACQGAPAAPGTGVPH*RSDSGTSGSPFAGH
Trigger: ATGCCCAGCAAATGGAGATCCGCTGGTTCCGGAGTCAGACCTTCAATGTGGTACACCTGTACCAGGAGCAGCAGGAGCTCCCTGGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000513424.1
ENST00000515271.1
CDS TCA 90 bp TGTCGGAGTGGAAGCGGCAGCCATATGTGCCCTTGTCAGAGGGGATaGTGCTGTGAAGCTGCAGGACCACGCTGCCATAGGCGATGTCGT +
Preference number: 5 (lower is better)
Translates to: CRSGSGSHMCPCQRG*CCEAAGPRCHRRCR
Trigger: ACGACATCGCCTATGGCAGCGTGGTCCTGCAGCTTCACAGCATCATCCCCTCTGACAAGGGCACATATGGCTGCCGCTTCCACTCCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000515271.1
CDS TCA 90 bp GCTTCAAACTCTGGAGGCAGGCACTGTCCCTGGTGGTCTCTCCACTaGACCTTAGGCTTGGGGTACCAGCCACTGGATCTGAGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: ASNSGGRHCPWWSLH*TLGLGYQPLDLSLS
Trigger: GCTGAGGCTCAGATCCAGTGGCTGGTACCCCAAGCCTAAGGTTCAGTGGAGAGACCACCAGGGACAGTGCCTGCCTCCAGAGTTTGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000515271.1
CDS-3UTR CAA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTTCGTCCTTGACCAACTaGGTCCTGTTCCGGAACGCC +
Preference number: 5 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCSSLTN*VLFRNA
Trigger: GGCGTTCCGGAACAGGACCAAGTTGGTCAAGGACGA...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp AGCGCCCTCCCTCCTGCTAGTGTGAAAATCAGGGTCGGAGCCTCCCAAATCTATATGGAGACGGACACATaGCTGAGGGCTCCCGCTCGG +
Preference number: 5 (lower is better)
Translates to: SALPPASVKIRVGASQIYMETDT*LRAPAR
Trigger: CCGAGCGGGAGCCCTCAGCAATGTGTCCGTCTCCAT...ATAGATTTGGGAGGCTCCGACCCTGATTTTCACACTAGCAGGAGGGAGGGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS TCA 90 bp GGGAGCTCCTGCTGCTCCTGGTACAGGTGTACCACATTGAAGGTCTaGCTCCGGAACCAGCGGATCTCCATTTGCTGGGCATCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: GSSCCSWYRCTTLKV*LRNQRISICWASSC
Trigger: ACAGCTGGATGCCCAGCAAATGGAGATCCGCTGGTTCCGGAGTCAGACCTTCAATGTGGTACACCTGTACCAGGAGCAGCAGGAGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000513424.1
ENST00000515271.1
CDS CCA 90 bp GCTACCTCCAGTTCCCAGAGAGCTTCGCCAGAGAAGTTGTCGGAGTaGAAGCGGCAGCCATATGTGCCCTTGTCAGAGGGGATGATGCTG +
Preference number: 5 (lower is better)
Translates to: ATSSSQRASPEKLSE*KRQPYVPLSEGMML
Trigger: CAGCATCATCCCCTCTGACAAGGGCACATATGGCTGCCGCTTCCACTCCGACAACTTCTCTGGCGAAGCTCTCTGGGAACTGGAGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000515271.1
CDS CCA 90 bp CAGACTGAACAGGTCCTGGGCATCCCAGACGATGGCTTCAAACTCTaGAGGCAGGCACTGTCCCTGGTGGTCTCTCCACTGAACCTTAGG +
Preference number: 5 (lower is better)
Translates to: QTEQVLGIPDDGFKL*RQALSLVVSPLNLR
Trigger: CCTAAGGTTCAGTGGAGAGACCACCAGGGACAGTGCCTGCCTCCAGAGTTTGAAGCCATCGTCTGGGATGCCCAGGACCTGTTCAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000515271.1
CDS CCA 90 bp GTTGTTGTGGAGTTAGAGGCAGCCTGGATACCTTCTCCAGGAGGGTaGCTGGCTAAAACGAAGCACTCAGCCTGGCCTTCAGCCCGTCTC +
Preference number: 5 (lower is better)
Translates to: VVVELEAAWIPSPGG*LAKTKHSAWPSARL
Trigger: GAGACGGGCTGAAGGCCAGGCTGAGTGCTTCGTTTTAGCCAGCCACCCTCCTGGAGAAGGTATCCAGGCTGCCTCTAACTCCACAACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CAA 90 bp AGCGCCCTCCCTCCTGCTAGTGTGAAAATCAGGGTCGGAGCCTCCCAAATCTATGCTTCGCCAGAGAAGTaGTCGGAGTGGAAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: SALPPASVKIRVGASQIYASPEK*SEWKRQ
Trigger: CTGCCGCTTCCACTCCGACAACTTCTCTGGCGAAGC...ATAGATTTGGGAGGCTCCGACCCTGATTTTCACACTAGCAGGAGGGAGGGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491209.5
CDS-3UTR CAA 90 bp GCCTCCGTGGAAAATGCAGCCGTTCCGCACCTCCGCTTTTGTCCATATGAACGACTGTCCCCGCTCACCTaGTCTCTTCTCCGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: ASVENAAVPHLRFCPYERLSPLT*SLLRLL
Trigger: AAGCAGGCGGAGAAGAGACAAGGTGAGCGGGGACAG...TCGTTCATATGGACAAAAGCGGAGGTGCGGAACGGCTGCATTTTCCACGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491209.5
ENST00000515271.1
CDS CCA 90 bp TCAGCAGTGGGGGCCACCTGGCAGGTAGCAGCAAAAGGTCTGAAATaGCAGATGAGTCCTGGTGAGCTCACCTCCTCTGCAAAGGGTGAT +
Preference number: 5 (lower is better)
Translates to: SAVGATWQVAAKGLK*QMSPGELTSSAKGD
Trigger: ATCACCCTTTGCAGAGGAGGTGAGCTCACCAGGACTCATCTGCCATTTCAGACCTTTTGCTGCTACCTGCCAGGTGGCCCCCACTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000513424.1
CDS-3UTR CAA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTGACAGAGACAATGTCTaGGGGGTAGGGGGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCDRDNV*GVGGEE
Trigger: TTCTTCACCCCCTACCCCCAAGACATTGTCTCTGTC...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp CCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTAATGGGAAATGGTTTTCAGGGCCTAGCACCTaGACCTCTGAGCTCGGCTCC +
Preference number: 5 (lower is better)
Translates to: PRLQKQLFLQLHFNGKWFSGPST*TSELGS
Trigger: GGAGCCGAGCTCAGAGGTCAAGGTGCTAGGCCCTGA...AAACCATTTCCCATTAAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp ACCTTGAAATTTTTGCCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTATGGAGACGGACACATaGCTGAGGGCTCCCGCTCGG +
Preference number: 5 (lower is better)
Translates to: TLKFLPRLQKQLFLQLHFMETDT*LRAPAR
Trigger: CCGAGCGGGAGCCCTCAGCAATGTGTCCGTCTCCAT...AAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCCCCCTCGCTGACATTTaGGCTGGTGCACCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: PTIHKRALDLSPFLEENRPLADI*AGAPAP
Trigger: GGGAGCAGGTGCACCAGCCAAAATGTCAGCGAGGGG...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTATCCACAAACGAGCTTaGGACTTGTCTCCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCIHKRA*DLSPFL
Trigger: AAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGAT...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp CCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTAATGGGAAATGGTTTTGTACACCCAGCATTTaGGGAGGCCCAGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: PRLQKQLFLQLHFNGKWFCTPSI*GGPGGR
Trigger: CCTCCCACCTGGGCCTCCCAAAATGCTGGGTGTACA...AAACCATTTCCCATTAAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS GCA 90 bp TTCAGCCCGTCTCCAGTCAAGCTCTGTCTGAAGCTTTTCCAGCTCTaGAGTGAGTTTCTCTTGTCTCTTCTCCGCCTGCTTCCTCAGCTT +
Preference number: 5 (lower is better)
Translates to: FSPSPVKLCLKLFQL*SEFLLSLLRLLPQL
Trigger: AAGCTGAGGAAGCAGGCGGAGAAGAGACAAGAGAAACTCACTGCAGAGCTGGAAAAGCTTCAGACAGAGCTTGACTGGAGACGGGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327705.14
ENST00000376841.6
CDS GCA 90 bp CAGGACTCTTATGCCTCATCCTATCTTAGCTCAAAGGTGGAAATCTaGACACAGCCCAGCTCTGCAGTGAGTTTCTCTCCGATGCGGCAC +
Preference number: 5 (lower is better)
Translates to: QDSYASSYLSSKVEI*TQPSSAVSFSPMRH
Trigger: GTGCCGCATCGGAGAGAAACTCACTGCAGAGCTGGGCTGTGTGCAGATTTCCACCTTTGAGCTAAGATAGGATGAGGCATAAGAGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506782.1
CDS CCA 90 bp GAGCTCACCTCCTCTGCAAAGGGTGATGATTGCTGTAAAGTGTCTTaGTCCCAGATGCTAAGATTCCCTAGACGTGGACTGGCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: ELTSSAKGDDCCKVS*SQMLRFPRRGLAAE
Trigger: CTCAGCTGCCAGTCCACGTCTAGGGAATCTTAGCATCTGGGACCAAGACACTTTACAGCAATCATCACCCTTTGCAGAGGAGGTGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000513424.1
ENST00000515271.1
CDS-3UTR CAA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCGCTTCGCCAGAGAAGTaGTCGGAGTGGAAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: PTIHKRALDLSPFLEENRASPEK*SEWKRQ
Trigger: CTGCCGCTTCCACTCCGACAACTTCTCTGGCGAAGC...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp ACTTGGACCCAGGAGGTTGAGGCTGCACTCCAGCCTGGCCGACAGAGACAATGTACTTGTCTCCTTTCCTaGAAGAAAATCGCACTACAC +
Preference number: 5 (lower is better)
Translates to: TWTQEVEAALQPGRQRQCTCLLS*KKIALH
Trigger: GTGTAGTGCGATTTTCTTCAAGGAAAGGAGACAAGT...ACATTGTCTCTGTCGGCCAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp ATTTTCAGTAGAGGAAGTCCCCAGAGCCAACTAGCATATACAGAGATGCTCAATTCAGGGCCTAGCACCTaGACCTCTGAGCTCGGCTCC +
Preference number: 5 (lower is better)
Translates to: IFSRGSPQSQLAYTEMLNSGPST*TSELGS
Trigger: GGAGCCGAGCTCAGAGGTCAAGGTGCTAGGCCCTGA...ATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGGACTTCCTCTACTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CAA 90 bp TTCACGATGTTTACCCATGAGGGATTAATCTCACACACACACACACACACACACCCAGCGGATCTCCATTaGCTGGGCATCCAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: FTMFTHEGLISHTHTHTHPADLH*LGIQLW
Trigger: CCACAGCTGGATGCCCAGCAAATGGAGATCCGCTGG...GTGTGTGTGTGTGTGTGTGTGTGAGATTAATCCCTCATGGGTAAACATCGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CAA 90 bp TCCCCAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGTCGTCCTTGACCAACTaGGTCCTGTTCCGGAACGCC +
Preference number: 5 (lower is better)
Translates to: SPEPTSIYRDAQSSQHSESSLTN*VLFRNA
Trigger: GGCGTTCCGGAACAGGACCAAGTTGGTCAAGGACGA...CTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CAA 90 bp CAGATGGCACAACAGAAGAAGGAATTCACGATGTTTACCCATGAGGGATTAATCATGGAGACGGACACATaGCTGAGGGCTCCCGCTCGG +
Preference number: 5 (lower is better)
Translates to: QMAQQKKEFTMFTHEGLIMETDT*LRAPAR
Trigger: CCGAGCGGGAGCCCTCAGCAATGTGTCCGTCTCCAT...GATTAATCCCTCATGGGTAAACATCGTGAATTCCTTCTTCTGTTGTGCCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS GCA 90 bp CAGATGAGTCCTGGTGAGCTCACCTCCTCTGCAAAGGGTGATGATTaGTGTAAAGTGTCTTGGTCCCAGATGCTAAGATTCCCTAGACGT +
Preference number: 5 (lower is better)
Translates to: QMSPGELTSSAKGDD*CKVSWSQMLRFPRR
Trigger: ACGTCTAGGGAATCTTAGCATCTGGGACCAAGACACTTTACAGCAATCATCACCCTTTGCAGAGGAGGTGAGCTCACCAGGACTCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000513424.1
ENST00000515271.1
CDS-3UTR CAA 90 bp TTGAAGAAAATCGCACTACACATACACATCTACGTAGGCAAAGGTCCCTCTCTTCCAGCGGATCTCCATTaGCTGGGCATCCAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: LKKIALHIHIYVGKGPSLPADLH*LGIQLW
Trigger: CCACAGCTGGATGCCCAGCAAATGGAGATCCGCTGG...AAGAGAGGGACCTTTGCCTACGTAGATGTGTATGTGTAGTGCGATTTTCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp CAGATGGCACAACAGAAGAAGGAATTCACGATGTTTACCCATGAGGGATTAATCGCTTCGCCAGAGAAGTaGTCGGAGTGGAAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: QMAQQKKEFTMFTHEGLIASPEK*SEWKRQ
Trigger: CTGCCGCTTCCACTCCGACAACTTCTCTGGCGAAGC...GATTAATCCCTCATGGGTAAACATCGTGAATTCCTTCTTCTGTTGTGCCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CAA 90 bp AATCTTCTCAGCATTCAGAGGTTGCAAACCCCAGAGAAATCTCCACACAGCGCCTGCAGTGAGTTTCTCTaGTCTCTTCTCCGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: NLLSIQRLQTPEKSPHSACSEFL*SLLRLL
Trigger: AAGCAGGCGGAGAAGAGACAAGAGAAACTCACTGCA...GGCGCTGTGTGGAGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CAA 90 bp TTTATTTTACTTCACCACACACAATGCTCCAGGCTCACCTTGAAATTTTTGCCCCGGGAAGACACGCTCTaGCCATCCTCCGACACCTCC +
Preference number: 5 (lower is better)
Translates to: FILLHHTQCSRLTLKFLPREDTL*PSSDTS
Trigger: GGAGGTGTCGGAGGATGGCAAGAGCGTGTCTTCCCG...GGGCAAAAATTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTGAAGTAAAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp TTTATTTTACTTCACCACACACAATGCTCCAGGCTCACCTTGAAATTTTTGCCCCTTGGACCCAGGAGGTaGAGGCTGCACTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: FILLHHTQCSRLTLKFLPLGPRR*RLHSSL
Trigger: CAGGCTGGAGTGCAGCCTCAACCTCCTGGGTCCAAG...GGGCAAAAATTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTGAAGTAAAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS GCA 90 bp CAGCTTCCTCTTTGCCCCTTCATTGCCCTCAAAAAGAGGCCCATCTaGAGGACTCTTATGCCTCATCCTATCTTAGCTCAAAGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: QLPLCPFIALKKRPI*RTLMPHPILAQRWK
Trigger: TTTCCACCTTTGAGCTAAGATAGGATGAGGCATAAGAGTCCTGCAGATGGGCCTCTTTTTGAGGGCAATGAAGGGGCAAAGAGGAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506782.1
ENST00000511056.1
CDS-3UTR CAA 90 bp CCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTAATGGGAAATGGTTTATCCACTGCATATTTTaGGGCTGCTCTCCACTCAGC +
Preference number: 5 (lower is better)
Translates to: PRLQKQLFLQLHFNGKWFIHCIF*GCSPLS
Trigger: GCTGAGTGGAGAGCAGCCCAAAAATATGCAGTGGAT...AAACCATTTCCCATTAAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp ACCTTGAAATTTTTGCCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTTGCAGTGAGTTTCTCTaGTCTCTTCTCCGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: TLKFLPRLQKQLFLQLHFCSEFL*SLLRLL
Trigger: AAGCAGGCGGAGAAGAGACAAGAGAAACTCACTGCA...AAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp TCAGTCCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAACAAAGGTCCCTCTCTTaGTCCCCCTCGCTGACATTT +
Preference number: 5 (lower is better)
Translates to: SVPQSTNELWTCLLSLKKQRSLS*SPSLTF
Trigger: AAATGTCAGCGAGGGGGACAAAGAGAGGGACCTTTG...TTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGGACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp TTGAAGAAAATCGCACTACACATACACATCTACGTAGGCAAAGGTCCCTCTCTTCTTGAGCGCAGGAGTTaGAGACCAGCCTGGGTAACA +
Preference number: 5 (lower is better)
Translates to: LKKIALHIHIYVGKGPSLLERRS*RPAWVT
Trigger: TGTTACCCAGGCTGGTCTCAAACTCCTGCGCTCAAG...AAGAGAGGGACCTTTGCCTACGTAGATGTGTATGTGTAGTGCGATTTTCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp TTGAAGAAAATCGCACTACACATACACATCTACGTAGGCAAAGGTCCCTCTCTTCTCACCTTGAAATTTTaGCCCCGGCTCCAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: LKKIALHIHIYVGKGPSLLTLKF*PRLQKQ
Trigger: CTGCTTCTGGAGCCGGGGCAAAAATTTCAAGGTGAG...AAGAGAGGGACCTTTGCCTACGTAGATGTGTATGTGTAGTGCGATTTTCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp CCCCGGCTCCAGAAGCAGCTGTTCCTCCAACTTCATTTTAATGGGAAATGGTTTGGTTGCCGTCACGTTTaGAGCCTTTATTTTACTTCA +
Preference number: 5 (lower is better)
Translates to: PRLQKQLFLQLHFNGKWFGCRHV*SLYFTS
Trigger: TGAAGTAAAATAAAGGCTCAAAACGTGACGGCAACC...AAACCATTTCCCATTAAAATGAAGTTGGAGGAACAGCTGCTTCTGGAGCCGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp TTTATTTTACTTCACCACACACAATGCTCCAGGCTCACCTTGAAATTTTTGCCCAAATTGGGCATGGTGTaGTGTGCTGAGGTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: FILLHHTQCSRLTLKFLPKLGMV*CAEVGG
Trigger: TCCTCCCACCTCAGCACACAACACCATGCCCAATTT...GGGCAAAAATTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTGAAGTAAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp CAGAGCCAACTAGCATATACAGAGATGCTCAATCTTCTCAGCATTCAGAGGTTGCTCAGCATTCAGAGGTaGCAAACCCCAGAGAAATCT +
Preference number: 5 (lower is better)
Translates to: QSQLAYTEMLNLLSIQRLLSIQR*QTPEKS
Trigger: AGATTTCTCTGGGGTTTGCAACCTCTGAATGCTGAG...CAACCTCTGAATGCTGAGAAGATTGAGCATCTCTGTATATGCTAGTTGGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS-3UTR CAA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCAAACGAGCTTTGGACTaGTCTCCTTTCCTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: PTIHKRALDLSPFLEENRKRALD*SPFLEE
Trigger: TTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTT...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCATAACGCACTTAAAATaGGGCATGGTGTTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: PTIHKRALDLSPFLEENRITHLK*GMVLCA
Trigger: AGCACACAACACCATGCCCAATTTTAAGTGCGTTAT...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp TTGAAGAAAATCGCACTACACATACACATCTACGTAGGCAAAGGTCCCTCTCTTATCCTGATGTTCAAATaGTCCCACAATTGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: LKKIALHIHIYVGKGPSLILMFK*SHNWSV
Trigger: CACTGACCAATTGTGGGACAATTTGAACATCAGGAT...AAGAGAGGGACCTTTGCCTACGTAGATGTGTATGTGTAGTGCGATTTTCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp CCCACAATCCACAAACGAGCTTTGGACTTGTCTCCTTTCCTTGAAGAAAATCGCAAACTAATAATGTCCTaGGTCCCATCATTGATGATG +
Preference number: 5 (lower is better)
Translates to: PTIHKRALDLSPFLEENRKLIMS*VPSLMM
Trigger: CATCATCAATGATGGGACCAAGGACATTATTAGTTT...GCGATTTTCTTCAAGGAAAGGAGACAAGTCCAAAGCTCGTTTGTGGATTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS-3UTR CAA 90 bp TTTATTTTACTTCACCACACACAATGCTCCAGGCTCACCTTGAAATTTTTGCCCCACCCAACTCTTAGTTaGCAAAATTTCAAACCCACA +
Preference number: 5 (lower is better)
Translates to: FILLHHTQCSRLTLKFLPHPTLS*QNFKPT
Trigger: TGTGGGTTTGAAATTTTGCAAACTAAGAGTTGGGTG...GGGCAAAAATTTCAAGGTGAGCCTGGAGCATTGTGTGTGGTGAAGTAAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS CAA 90 bp TGGCCAGGCGCCGGGCCTGGCGGCGCCCCGCGGGAAGACACGCTCTaGCCATCCTCCGACACCTCCAGGCTGGGGTGCGCCGAGGCCGGG +
Preference number: 6 (lower is better)
Translates to: WPGAGPGGAPREDTL*PSSDTSRLGCAEAG
Trigger: CCCGGCCTCGGCGCACCCCAGCCTGGAGGTGTCGGAGGATGGCAAGAGCGTGTCTTCCCGCGGGGCGCCGCCAGGCCCGGCGCCTGGCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS GCA 72 bp CCAGGCGCCGCTGAGCACCGAGAGGCGAGACCGGCCTaGCCGCCGCGTGCCGGGAAACCTCCCGCGGGACCT +
Preference number: 6 (lower is better)
Translates to: PGAAEHREARPA*PPRAGKPPAGP
Trigger: AGGTCCCGCGGGAGGTTTCCCGGCACGCGGCGGGCAGGCCGGTCTCGCCTCTCGGTGCTCAGCGGCGCCTGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509395.1
CDS TCA 72 bp GGAAGACGCCCAGGCGCCGCGGGGGCACGCGCAGGGTaGGCGCGACGCGGTGCGGGGCCAGGACGAAGTACT +
Preference number: 6 (lower is better)
Translates to: GRRPGAAGARAG*ARRGAGPGRST
Trigger: AGTACTTCGTCCTGGCCCCGCACCGCGTCGCGCTCACCCTGCGCGTGCCCCCGCGGCGCCTGGGCGTCTTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS GCA 72 bp CGCCGCGGGGGCACGCGCAGGGTGAGCGCGACGCGGTaGGGGGCCAGGACGAAGTACTCGCAGCCGTTCCAC +
Preference number: 6 (lower is better)
Translates to: RRGGTRRVSATR*GARTKYSQPFH
Trigger: GTGGAACGGCTGCGAGTACTTCGTCCTGGCCCCGCACCGCGTCGCGCTCACCCTGCGCGTGCCCCCGCGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS CCA 72 bp CTCCGAGAACCGCTGCGGGTGGCCAGGCGCCGGGCCTaGCGGCGCCCCGCGGGAAGACACGCTCTTGCCATC +
Preference number: 6 (lower is better)
Translates to: LREPLRVARRRA*RRPAGRHALAI
Trigger: GATGGCAAGAGCGTGTCTTCCCGCGGGGCGCCGCCAGGCCCGGCGCCTGGCCACCCGCAGCGGTTCTCGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS GCA 72 bp TCCGCCTGCTTCCTCAGCTTTTCTCGGCTTCTCCGCTaGTTCCGGAGGACGCCCAGCGCCAGCGCCGCGAGG +
Preference number: 6 (lower is better)
Translates to: SACFLSFSRLLR*FRRTPSASAAR
Trigger: CCTCGCGGCGCTGGCGCTGGGCGTCCTCCGGAAGCAGCGGAGAAGCCGAGAAAAGCTGAGGAAGCAGGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000509395.1
ENST00000511056.1
ENST00000511589.1
ENST00000515271.1
CDS CCA 72 bp CAGATGGTCAGGGGATCCGGATGTTCGCCGCCGTCGTaGGCCCTGGGCCTGAAGTACGCACAGAGCGCGCCC +
Preference number: 6 (lower is better)
Translates to: QMVRGSGCSPPS*ALGLKYAQSAP
Trigger: GGGCGCGCTCTGTGCGTACTTCAGGCCCAGGGCCCACGACGGCGGCGAACATCCGGATCCCCTGACCATCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS TCA 72 bp GATCCGGATGTTCGCCGCCGTCGTGGGCCCTGGGCCTaGAGTACGCACAGAGCGCGCCCGAGAAGGTGTCGT +
Preference number: 6 (lower is better)
Translates to: DPDVRRRRGPWA*STHRARPRRCR
Trigger: ACGACACCTTCTCGGGCGCGCTCTGTGCGTACTTCAGGCCCAGGGCCCACGACGGCGGCGAACATCCGGATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS CCA 72 bp GCTCTTCCACGCAGAGGCTCCGGGTACGAACACGTCTaGAAAACACCCGCGGGGGCCGTGTCGGTCCAGGCG +
Preference number: 6 (lower is better)
Translates to: ALPRRGSGYEHV*KTPAGAVSVQA
Trigger: CGCCTGGACCGACACGGCCCCCGCGGGTGTTTTCCAGACGTGTTCGTACCCGGAGCCTCTGCGTGGAAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509395.1
ENST00000511056.1
CDS CAA 72 bp GACCCACAGCCTTTAGATGACGGCGGGTTTTGGCACTaGGGCAGGTGCGTGCAGAACGCCCTGTCCCCGCTC +
Preference number: 6 (lower is better)
Translates to: DPQPLDDGGFWH*GRCVQNALSPL
Trigger: GAGCGGGGACAGGGCGTTCTGCACGCACCTGCCCAAGTGCCAAAACCCGCCGTCATCTAAAGGCTGTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491209.5
ENST00000509395.1
ENST00000511589.1
ENST00000515271.1
CDS CAA 90 bp CCCAGCCCTGCTACCTCCAGTTCCCAGAGAGCTTCGCCAGAGAAGTaGTCGGAGTGGAAGCGGCAGCCATATGTGCCCTTGTCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: PSPATSSSQRASPEK*SEWKRQPYVPLSEG
Trigger: CCCCTCTGACAAGGGCACATATGGCTGCCGCTTCCACTCCGACAACTTCTCTGGCGAAGCTCTCTGGGAACTGGAGGTAGCAGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000515271.1
CDS TCA 72 bp GGTCAGCGATACTGGCTTCAAGGAGTCTGGGGAGACTaGGAGGTCCACCATCTCTCGTCAGCAGTGGGGGCC +
Preference number: 6 (lower is better)
Translates to: GQRYWLQGVWGD*EVHHLSSAVGA
Trigger: GGCCCCCACTGCTGACGAGAGATGGTGGACCTCTCAGTCTCCCCAGACTCCTTGAAGCCAGTATCGCTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000513424.1
CDS CCA 72 bp CAGGTCCTGGGCATCCCAGACGATGGCTTCAAACTCTaGAGGCAGGCACTGTCCCTGGTGGTCTCTCCACTG +
Preference number: 6 (lower is better)
Translates to: QVLGIPDDGFKL*RQALSLVVSPL
Trigger: CAGTGGAGAGACCACCAGGGACAGTGCCTGCCTCCAGAGTTTGAAGCCATCGTCTGGGATGCCCAGGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000515271.1
CDS CCA 72 bp CTGAAGTACGCACAGAGCGCGCCCGAGAAGGTGTCGTaGAAGGTGAAGATGTGGGAGCCGTCGGACACGTTG +
Preference number: 6 (lower is better)
Translates to: LKYAQSAPEKVS*KVKMWEPSDTL
Trigger: CAACGTGTCCGACGGCTCCCACATCTTCACCTTCCACGACACCTTCTCGGGCGCGCTCTGTGCGTACTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS TCA 72 bp GGAAGCGGCAGCCATATGTGCCCTTGTCAGAGGGGATaGTGCTGTGAAGCTGCAGGACCACGCTGCCATAGG +
Preference number: 6 (lower is better)
Translates to: GSGSHMCPCQRG*CCEAAGPRCHR
Trigger: CCTATGGCAGCGTGGTCCTGCAGCTTCACAGCATCATCCCCTCTGACAAGGGCACATATGGCTGCCGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000515271.1
CDS CCA 72 bp AGCGCGCCCGAGAAGGTGTCGTGGAAGGTGAAGATGTaGGAGCCGTCGGACACGTTGAAGAAGGACAGCTCT +
Preference number: 6 (lower is better)
Translates to: SAPEKVSWKVKM*EPSDTLKKDSS
Trigger: AGAGCTGTCCTTCTTCAACGTGTCCGACGGCTCCCACATCTTCACCTTCCACGACACCTTCTCGGGCGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327705.14
CDS CCA 72 bp GGGGCCACCTGGCAGGTAGCAGCAAAAGGTCTGAAATaGCAGATGAGTCCTGGTGAGCTCACCTCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: GATWQVAAKGLK*QMSPGELTSSA
Trigger: TGCAGAGGAGGTGAGCTCACCAGGACTCATCTGCCATTTCAGACCTTTTGCTGCTACCTGCCAGGTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000513424.1
CDS CCA 72 bp AGTTCCCAGAGAGCTTCGCCAGAGAAGTTGTCGGAGTaGAAGCGGCAGCCATATGTGCCCTTGTCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: SSQRASPEKLSE*KRQPYVPLSEG
Trigger: CCCCTCTGACAAGGGCACATATGGCTGCCGCTTCCACTCCGACAACTTCTCTGGCGAAGCTCTCTGGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000515271.1
CDS CAA 72 bp GCTACCTCCAGTTCCCAGAGAGCTTCGCCAGAGAAGTaGTCGGAGTGGAAGCGGCAGCCATATGTGCCCTTG +
Preference number: 6 (lower is better)
Translates to: ATSSSQRASPEK*SEWKRQPYVPL
Trigger: CAAGGGCACATATGGCTGCCGCTTCCACTCCGACAACTTCTCTGGCGAAGCTCTCTGGGAACTGGAGGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000515271.1
CDS TCA 72 bp TGCTGCTCCTGGTACAGGTGTACCACATTGAAGGTCTaGCTCCGGAACCAGCGGATCTCCATTTGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: CCSWYRCTTLKV*LRNQRISICWA
Trigger: TGCCCAGCAAATGGAGATCCGCTGGTTCCGGAGTCAGACCTTCAATGTGGTACACCTGTACCAGGAGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000513424.1
ENST00000515271.1
CDS GCA 72 bp GTGGAAATCTGCACACAGCCTTGTCTCTTCTCCGCCTaGTTCCTCAGCTTTTCTCGGCTTCTCCGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: VEICTQPCLFSA*FLSFSRLLRCF
Trigger: GAAGCAGCGGAGAAGCCGAGAAAAGCTGAGGAAGCAGGCGGAGAAGAGACAAGGCTGTGTGCAGATTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511056.1
CDS GCA 72 bp AGCTCTGCAGTGAGTTTCTCTTGTCTCTTCTCCGCCTaGTTCCTCAGCTTTTCTCGGCTTCTCCGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SSAVSFSCLFSA*FLSFSRLLRCF
Trigger: GAAGCAGCGGAGAAGCCGAGAAAAGCTGAGGAAGCAGGCGGAGAAGAGACAAGAGAAACTCACTGCAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327705.14
ENST00000376841.6
CDS GCA 72 bp AACAGGAAATTAGCACATCAGGACCCCAAGCTTCCCTaGTCACACATCACATCTTGCACCCACCCTGTCCCG +
Preference number: 6 (lower is better)
Translates to: NRKLAHQDPKLP*SHITSCTHPVP
Trigger: CGGGACAGGGTGGGTGCAAGATGTGATGTGTGAGCAGGGAAGCTTGGGGTCCTGATGTGCTAATTTCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512570.1
CDS CCA 72 bp CTTGACCTCTGGCAGGTAGCAGCAAAAGGTCTGAAATaGCAGATGAGTCCTGGTGAGCTCACCTCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: LDLWQVAAKGLK*QMSPGELTSSA
Trigger: TGCAGAGGAGGTGAGCTCACCAGGACTCATCTGCCATTTCAGACCTTTTGCTGCTACCTGCCAGAGGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515271.1
CDS CAA 72 bp ACGAGGGCCAGGATGGGATACTCAGGGCCTAGCACCTaGACCTCTGAAAGGAGACATCAAATTGCTGATGGT +
Preference number: 6 (lower is better)
Translates to: TRARMGYSGPST*TSERRHQIADG
Trigger: ACCATCAGCAATTTGATGTCTCCTTTCAGAGGTCAAGGTGCTAGGCCCTGAGTATCCCATCCTGGCCCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513424.1
CDS CCA 72 bp TATGCATTCAGTGTTGTTGTGGAGTTAGAGGCAGCCTaGATACCTTCTCCAGGAGGGTGGCTGGCTAAAACG +
Preference number: 6 (lower is better)
Translates to: YAFSVVVELEAA*IPSPGGWLAKT
Trigger: CGTTTTAGCCAGCCACCCTCCTGGAGAAGGTATCCAGGCTGCCTCTAACTCCACAACAACACTGAATGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376841.6
CDS GCA 72 bp CCTGGTGAGCTCACCTCCTCTGCAAAGGGTGATGATTaGTGTAAAGTGTCTTGGTCCCAGATGCTAAGATTC +
Preference number: 6 (lower is better)
Translates to: PGELTSSAKGDD*CKVSWSQMLRF
Trigger: GAATCTTAGCATCTGGGACCAAGACACTTTACAGCAATCATCACCCTTTGCAGAGGAGGTGAGCTCACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000513424.1
ENST00000515271.1
CDS GCA 72 bp TCTCCAGTCAAGCTCTGTCTGAAGCTTTTCCAGCTCTaGAGTGAGTTTCTCTTGTCTCTTCTCCGCCTGCTT +
Preference number: 6 (lower is better)
Translates to: SPVKLCLKLFQL*SEFLLSLLRLL
Trigger: AAGCAGGCGGAGAAGAGACAAGAGAAACTCACTGCAGAGCTGGAAAAGCTTCAGACAGAGCTTGACTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327705.14
ENST00000376841.6
CDS GCA 72 bp TATGCCTCATCCTATCTTAGCTCAAAGGTGGAAATCTaGACACAGCCCAGCTCTGCAGTGAGTTTCTCTCCG +
Preference number: 6 (lower is better)
Translates to: YASSYLSSKVEI*TQPSSAVSFSP
Trigger: CGGAGAGAAACTCACTGCAGAGCTGGGCTGTGTGCAGATTTCCACCTTTGAGCTAAGATAGGATGAGGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506782.1
CDS GCA 72 bp CTTTGCCCCTTCATTGCCCTCAAAAAGAGGCCCATCTaGAGGACTCTTATGCCTCATCCTATCTTAGCTCAA +
Preference number: 6 (lower is better)
Translates to: LCPFIALKKRPI*RTLMPHPILAQ
Trigger: TTGAGCTAAGATAGGATGAGGCATAAGAGTCCTGCAGATGGGCCTCTTTTTGAGGGCAATGAAGGGGCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506782.1
ENST00000511056.1
CDS CCA 72 bp TCCTCTGCAAAGGGTGATGATTGCTGTAAAGTGTCTTaGTCCCAGATGCTAAGATTCCCTAGACGTGGACTG +
Preference number: 6 (lower is better)
Translates to: SSAKGDDCCKVS*SQMLRFPRRGL
Trigger: CAGTCCACGTCTAGGGAATCTTAGCATCTGGGACCAAGACACTTTACAGCAATCATCACCCTTTGCAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327705.14
ENST00000376841.6
ENST00000491209.5
ENST00000513424.1
ENST00000515271.1
CDS CCA 72 bp AGGACTCTTATGCCTCATCCTATCTTAGCTCAAAGGTaGAAATCTGCACACAGCCTTGTCTCTTCTCCGCCT +
Preference number: 6 (lower is better)
Translates to: RTLMPHPILAQR*KSAHSLVSSPP
Trigger: AGGCGGAGAAGAGACAAGGCTGTGTGCAGATTTCCACCTTTGAGCTAAGATAGGATGAGGCATAAGAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511056.1