Pregenerated sensors for BTNL3 (Homo sapiens)
Ensembl gene IDs: ENSG00000168903Ensembl transcript IDs: ENST00000342868.7
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTaGGCCTCACAAAGCAGGTGTTCAATAACTATTCCATGGGTGATT | + |
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Preference number: 1 (lower is better) Translates to: WAYRISEKSYLLFIL*ASQSRCSITIPWVI Trigger: AATCACCCATGGAATAGTTATTGAACACCTGCTTTGTGAGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR CAA 90 bp | GGCTCCGGAGAGGAAGCTGGGGCCACCTGTCGGGAGCACTCTCCCTaGGCTGTGTCTGGGTCTGTGGTGTGGGGCCCTTTAAGCAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: GSGEEAGATCREHSP*AVSGSVVWGPLSRV Trigger: GACCCTGCTTAAAGGGCCCCACACCACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCGACAGGTGGCCCCAGCTTCCTCTCCGGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTGGCAGCCATGGCTTCTaGCTCCCACAGGGTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: AGLIESVKNPTSSLFFEPGSHGF*LPQGQA Trigger: GGCCTGACCCTGTGGGAGTCAGAAGCCATGGCTGCC...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR-3UTR GCA 90 bp | TGGATGGAGTTTTCACAAACTAAACCTAATGTGAGTCTATTCCGTCCCCACTTCAGCTGTGACTGCCGCTaGTGCAGGGCTCAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: WMEFSQTKPNVSLFRPHFSCDCR*CRAQGR Trigger: TCTGCCCTGAGCCCTGCAGCAGCGGCAGTCACAGCT...GAAGTGGGGACGGAATAGACTCACATTAGGTTTAGTTTGTGAAAACTCCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR-3UTR GCA 90 bp | TGGATGGAGTTTTCACAAACTAAACCTAATGTGAGTCTATTCCGTCCCCACTTCTCTGGAAGCTGTGACTaGCGCTGCTGCAGGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: WMEFSQTKPNVSLFRPHFSGSCD*RCCRAQ Trigger: CTGAGCCCTGCAGCAGCGGCAGTCACAGCTTCCAGA...GAAGTGGGGACGGAATAGACTCACATTAGGTTTAGTTTGTGAAAACTCCATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR-3UTR CCA 90 bp | TGGATGGAGTTTTCACAAACTAAACCTAATGTGAGTCTATTCCGTCCCCACTTCTCTGGGTCTGTGGTGTaGGGCCCTTTAAGCAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: WMEFSQTKPNVSLFRPHFSGSVV*GPLSRV Trigger: GACCCTGCTTAAAGGGCCCCACACCACAGACCCAGA...GAAGTGGGGACGGAATAGACTCACATTAGGTTTAGTTTGTGAAAACTCCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTGGGAGCACTCTCCCTTaGCTGTGTCTGGGTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: AGLIESVKNPTSSLFFEPGSTLP*LCLGLW Trigger: CCACAGACCCAGACACAGCCAAGGGAGAGTGCTCCC...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR-3UTR TCA 90 bp | GGTAATGCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTCTCATCTGGAAGCTGTaGCTGCCGCTGCTGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: GNAGLIESVKNPTSSLFFLIWKL*LPLLQG Trigger: GCCCTGCAGCAGCGGCAGTCACAGCTTCCAGATGAG...AAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGCATTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR-3UTR GCA 90 bp | AATTTTTGTGTCTGTGTTAATGAGGGATATGGACCTGTAGTTTTCCTTCCTCTTGGGCGTGACTCTCTGTaGGCAGGCTCCGGAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: NFCVCVNEGYGPVVFLPLGRDSL*AGSGEE Trigger: TTCCTCTCCGGAGCCTGCGCACAGAGAGTCACGCCC...AAGAGGAAGGAAAACTACAGGTCCATATCCCTCATTAACACAGACACAAAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR-3UTR TCA 90 bp | ATCATTAGCAAACACTGTGCCCTCAAACCTGCAAGCATGATTCACATTCGTTGTGAGCCTGGGAGGTTGTaGCTTGTTCAAGATCGCTTA | + |
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Preference number: 2 (lower is better) Translates to: IISKHCALKPASMIHIRCEPGRL*LVQDRL Trigger: TAAGCGATCTTGAACAAGTCACAACCTCCCAGGCTC...ACAACGAATGTGAATCATGCTTGCAGGTTTGAGGGCACAGTGTTTGCTAATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTAAACTAAACCTAATGTaGGTCTATTCCGTCCCCACT | + |
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Preference number: 2 (lower is better) Translates to: AGLIESVKNPTSSLFFEPKLNLM*VYSVPT Trigger: AGTGGGGACGGAATAGACTCACATTAGGTTTAGTTT...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR-3UTR GCA 90 bp | GGTAATGCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTCTGTGCCCTCAAACCTaGAAGCATGATTCACATTCG | + |
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Preference number: 2 (lower is better) Translates to: GNAGLIESVKNPTSSLFFLCPQT*KHDSHS Trigger: CGAATGTGAATCATGCTTGCAGGTTTGAGGGCACAG...AAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGCATTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR-3UTR CCA 90 bp | GGTAATGCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGATCGCTTAGCTGGATaGAGTTTTCACAAACTAAAC | + |
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Preference number: 2 (lower is better) Translates to: GNAGLIESVKNPTSSLFFDRLAG*SFHKLN Trigger: GTTTAGTTTGTGAAAACTCCATCCAGCTAAGCGATC...AAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGCATTACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR CCA 72 bp | GGCCACCTGTCGGGAGCACTCTCCCTTGGCTGTGTCTaGGTCTGTGGTGTGGGGCCCTTTAAGCAGGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: GHLSGALSLGCV*VCGVGPFKQGL Trigger: AAGACCCTGCTTAAAGGGCCCCACACCACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCGACAGGTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR-3UTR CAA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTCGGGAGCACTCTCCCTaGGCTGTGTCTGGGTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: AGLIESVKNPTSSLFFEPREHSP*AVSGSV Trigger: CACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCG...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR CCA 72 bp | GCCTGGGAGGTTGTGACTTGTTCAAGATCGCTTAGCTaGATGGAGTTTTCACAAACTAAACCTAATGTGAGT | + |
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Preference number: 3 (lower is better) Translates to: AWEVVTCSRSLS*MEFSQTKPNVS Trigger: ACTCACATTAGGTTTAGTTTGTGAAAACTCCATCCAGCTAAGCGATCTTGAACAAGTCACAACCTCCCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| 3UTR TCA 72 bp | AGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTaGGCCTCACAAAGCAGGTGTTCAATAACTATTCCA | + |
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Preference number: 3 (lower is better) Translates to: RISEKSYLLFIL*ASQSRCSITIP Trigger: TGGAATAGTTATTGAACACCTGCTTTGTGAGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | GGAAGCTGGGGCCACCTGTCGGGAGCACTCTCCCTTGGCTGTGTCTGGGTCTGTGGTGGATGGATGATTTaGAGGTCAGGCCAGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GSWGHLSGALSLGCVWVCGGWMI*RSGQLS Trigger: AGACAGCTGGCCTGACCTCCAAATCATCCATCCACC...ACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCGACAGGTGGCCCCAGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | GGAAGCTGGGGCCACCTGTCGGGAGCACTCTCCCTTGGCTGTGTCTGGGTCTGTACCACAGCATGGAACTaGTTCCTGAAGAACCGCACT | + |
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Preference number: 4 (lower is better) Translates to: GSWGHLSGALSLGCVWVCTTAWN*FLKNRT Trigger: AGTGCGGTTCTTCAGGAATCAGTTCCATGCTGTGGT...ACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCGACAGGTGGCCCCAGCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | GGAAGCTGGGGCCACCTGTCGGGAGCACTCTCCCTTGGCTGTGTCTGGGTCTGTGAGCCTGGGAGGTTGTaGCTTGTTCAAGATCGCTTA | + |
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Preference number: 4 (lower is better) Translates to: GSWGHLSGALSLGCVWVCEPGRL*LVQDRL Trigger: TAAGCGATCTTGAACAAGTCACAACCTCCCAGGCTC...ACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCGACAGGTGGCCCCAGCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR GCA 90 bp | GGAAGCTGGGGCCACCTGTCGGGAGCACTCTCCCTTGGCTGTGTCTGGGTCTGTCGATACTGTGGCATCTaGTTAGATTCCCAGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GSWGHLSGALSLGCVWVCRYCGI*LDSQSS Trigger: GGAAGACTGGGAATCTAAGCAGATGCCACAGTATCG...ACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCGACAGGTGGCCCCAGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR GCA 90 bp | GGAAGCTGGGGCCACCTGTCGGGAGCACTCTCCCTTGGCTGTGTCTGGGTCTGTCTGTGCCCTCAAACCTaGAAGCATGATTCACATTCG | + |
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Preference number: 4 (lower is better) Translates to: GSWGHLSGALSLGCVWVCLCPQT*KHDSHS Trigger: CGAATGTGAATCATGCTTGCAGGTTTGAGGGCACAG...ACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCGACAGGTGGCCCCAGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | GGAAGCTGGGGCCACCTGTCGGGAGCACTCTCCCTTGGCTGTGTCTGGGTCTGTCTCTGCTCAGCAAGGTaGATGGAACACAATATGCTC | + |
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Preference number: 4 (lower is better) Translates to: GSWGHLSGALSLGCVWVCLCSAR*MEHNML Trigger: GAGCATATTGTGTTCCATCCACCTTGCTGAGCAGAG...ACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCGACAGGTGGCCCCAGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | GGAAGCTGGGGCCACCTGTCGGGAGCACTCTCCCTTGGCTGTGTCTGGGTCTGTGACAGGCAGAGTAACTaGATACCTCCGTCAACATAT | + |
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Preference number: 4 (lower is better) Translates to: GSWGHLSGALSLGCVWVCDRQSN*IPPSTY Trigger: ATATGTTGACGGAGGTATCCAGTTACTCTGCCTGTC...ACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCGACAGGTGGCCCCAGCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | GGAAGCTGGGGCCACCTGTCGGGAGCACTCTCCCTTGGCTGTGTCTGGGTCTGTGATCGCTTAGCTGGATaGAGTTTTCACAAACTAAAC | + |
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Preference number: 4 (lower is better) Translates to: GSWGHLSGALSLGCVWVCDRLAG*SFHKLN Trigger: GTTTAGTTTGTGAAAACTCCATCCAGCTAAGCGATC...ACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCGACAGGTGGCCCCAGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | TGGATGGAGTTTTCACAAACTAAACCTAATGTGAGTCTATTCCGTCCCCACTTCCTCATCTGGAAGCTGTaGCTGCCGCTGCTGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: WMEFSQTKPNVSLFRPHFLIWKL*LPLLQG Trigger: GCCCTGCAGCAGCGGCAGTCACAGCTTCCAGATGAG...GAAGTGGGGACGGAATAGACTCACATTAGGTTTAGTTTGTGAAAACTCCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTCTCCGGAGAGGAAGCTaGGGCCACCTGTCGGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: AGLIESVKNPTSSLFFEPLRRGS*GHLSGA Trigger: TGCTCCCGACAGGTGGCCCCAGCTTCCTCTCCGGAG...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | TGGATGGAGTTTTCACAAACTAAACCTAATGTGAGTCTATTCCGTCCCCACTTCGCAGGGGTGGATGGATaGTTTGGAGGTCAGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: WMEFSQTKPNVSLFRPHFAGVDG*FGGQAS Trigger: GCTGGCCTGACCTCCAAATCATCCATCCACCCCTGC...GAAGTGGGGACGGAATAGACTCACATTAGGTTTAGTTTGTGAAAACTCCATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR GCA 90 bp | ATCATTAGCAAACACTGTGCCCTCAAACCTGCAAGCATGATTCACATTCGTTGTCCCGGTCCAGTGACTTaGCACTGTCCTGACACCAGC | + |
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Preference number: 4 (lower is better) Translates to: IISKHCALKPASMIHIRCPGPVT*HCPDTS Trigger: GCTGGTGTCAGGACAGTGGCAAGTCACTGGACCGGG...ACAACGAATGTGAATCATGCTTGCAGGTTTGAGGGCACAGTGTTTGCTAATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR GCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTAGCTGTGACTGCCGCTaGTGCAGGGCTCAGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: AGLIESVKNPTSSLFFEPSCDCR*CRAQGR Trigger: TCTGCCCTGAGCCCTGCAGCAGCGGCAGTCACAGCT...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTTCCCTTGGCTGTGTCTaGGTCTGTGGTGTGGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: AGLIESVKNPTSSLFFEPSLGCV*VCGVGP Trigger: GGGCCCCACACCACAGACCCAGACACAGCCAAGGGA...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | AATTTTTGTGTCTGTGTTAATGAGGGATATGGACCTGTAGTTTTCCTTCCTCTTGGCAGCCATGGCTTCTaGCTCCCACAGGGTCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: NFCVCVNEGYGPVVFLPLGSHGF*LPQGQA Trigger: GGCCTGACCCTGTGGGAGTCAGAAGCCATGGCTGCC...AAGAGGAAGGAAAACTACAGGTCCATATCCCTCATTAACACAGACACAAAAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR GCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTTCTGGAAGCTGTGACTaGCGCTGCTGCAGGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: AGLIESVKNPTSSLFFEPSGSCD*RCCRAQ Trigger: CTGAGCCCTGCAGCAGCGGCAGTCACAGCTTCCAGA...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR GCA 90 bp | GGTAATGCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGGGCGTGACTCTCTGTaGGCAGGCTCCGGAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GNAGLIESVKNPTSSLFFGRDSL*AGSGEE Trigger: TTCCTCTCCGGAGCCTGCGCACAGAGAGTCACGCCC...AAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGCATTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | TGGATGGAGTTTTCACAAACTAAACCTAATGTGAGTCTATTCCGTCCCCACTTCGACAGCAGGGGTGGATaGATGATTTGGAGGTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: WMEFSQTKPNVSLFRPHFDSRGG*MIWRSG Trigger: GCCTGACCTCCAAATCATCCATCCACCCCTGCTGTC...GAAGTGGGGACGGAATAGACTCACATTAGGTTTAGTTTGTGAAAACTCCATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTACTTCAGGGCAGCCATaGCTTCTGACTCCCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: AGLIESVKNPTSSLFFEPTSGQP*LLTPTG Trigger: CCCTGTGGGAGTCAGAAGCCATGGCTGCCCTGAAGT...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | ATCATTAGCAAACACTGTGCCCTCAAACCTGCAAGCATGATTCACATTCGTTGTCGCCAAGGTGAGGGCTaGAAAAACGTCTCTCCTATC | + |
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Preference number: 4 (lower is better) Translates to: IISKHCALKPASMIHIRCRQGEG*KNVSPI Trigger: GATAGGAGAGACGTTTTTCCAGCCCTCACCTTGGCG...ACAACGAATGTGAATCATGCTTGCAGGTTTGAGGGCACAGTGTTTGCTAATGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | AATTTTTGTGTCTGTGTTAATGAGGGATATGGACCTGTAGTTTTCCTTCCTCTTGGGAGCACTCTCCCTTaGCTGTGTCTGGGTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: NFCVCVNEGYGPVVFLPLGSTLP*LCLGLW Trigger: CCACAGACCCAGACACAGCCAAGGGAGAGTGCTCCC...AAGAGGAAGGAAAACTACAGGTCCATATCCCTCATTAACACAGACACAAAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | AATTTTTGTGTCTGTGTTAATGAGGGATATGGACCTGTAGTTTTCCTTCCTCTTACTTGCCCGGTCCAGTaGCTTGCCACTGTCCTGACA | + |
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Preference number: 4 (lower is better) Translates to: NFCVCVNEGYGPVVFLPLTCPVQ*LATVLT Trigger: TGTCAGGACAGTGGCAAGTCACTGGACCGGGCAAGT...AAGAGGAAGGAAAACTACAGGTCCATATCCCTCATTAACACAGACACAAAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | AATTTTTGTGTCTGTGTTAATGAGGGATATGGACCTGTAGTTTTCCTTCCTCTTTCTGGGTCTGTGGTGTaGGGCCCTTTAAGCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: NFCVCVNEGYGPVVFLPLSGSVV*GPLSRV Trigger: GACCCTGCTTAAAGGGCCCCACACCACAGACCCAGA...AAGAGGAAGGAAAACTACAGGTCCATATCCCTCATTAACACAGACACAAAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | ATCATTAGCAAACACTGTGCCCTCAAACCTGCAAGCATGATTCACATTCGTTGTTGGAGAGGCTCTTCATaGACGATGTCAAACTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: IISKHCALKPASMIHIRCWRGSS*TMSNCA Trigger: TGCACAGTTTGACATCGTTCATGAAGAGCCTCTCCA...ACAACGAATGTGAATCATGCTTGCAGGTTTGAGGGCACAGTGTTTGCTAATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR GCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTCACTTCCATAGCCTCTaGACTGGTCTCAGGAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: AGLIESVKNPTSSLFFEPHFHSL*TGLRKE Trigger: CTCTTTCCTGAGACCAGTGCAGAGGCTATGGAAGTG...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | ATCATTAGCAAACACTGTGCCCTCAAACCTGCAAGCATGATTCACATTCGTTGTTCTCCCTCGATACTGTaGCATCTGCTTAGATTCCCA | + |
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Preference number: 4 (lower is better) Translates to: IISKHCALKPASMIHIRCSPSIL*HLLRFP Trigger: TGGGAATCTAAGCAGATGCCACAGTATCGAGGGAGA...ACAACGAATGTGAATCATGCTTGCAGGTTTGAGGGCACAGTGTTTGCTAATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTGCTCAGCAAGGTGGATaGAACACAATATGCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: AGLIESVKNPTSSLFFEPAQQGG*NTICSQ Trigger: CTGGGAGCATATTGTGTTCCATCCACCTTGCTGAGC...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTCACTATGAAAACAGATaGCAGCAGGGGTGGATGGAT | + |
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Preference number: 4 (lower is better) Translates to: AGLIESVKNPTSSLFFEPHYENR*QQGWMD Trigger: ATCCATCCACCCCTGCTGTCATCTGTTTTCATAGTG...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | ATCATTAGCAAACACTGTGCCCTCAAACCTGCAAGCATGATTCACATTCGTTGTGTTGATCTCACACTATaGAAACAGATGACAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: IISKHCALKPASMIHIRCVDLTL*KQMTAG Trigger: CCCTGCTGTCATCTGTTTTCATAGTGTGAGATCAAC...ACAACGAATGTGAATCATGCTTGCAGGTTTGAGGGCACAGTGTTTGCTAATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | GGTAATGCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTCGTAAATCTGGGAACTaGACCAGCACCCATACAGGC | + |
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Preference number: 4 (lower is better) Translates to: GNAGLIESVKNPTSSLFFRKSGN*TSTHTG Trigger: GCCTGTATGGGTGCTGGTTCAGTTCCCAGATTTACG...AAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGCATTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTGTTCTGTTGTCAGTCTaGGGACCCAATACCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: AGLIESVKNPTSSLFFEPVLLSV*GPNTHC Trigger: ACAATGGGTATTGGGTCCTCAGACTGACAACAGAAC...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTTTTAATCTTCACCTGTaGGGCAGGAATCACTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: AGLIESVKNPTSSLFFEPFNLHL*GRNHCP Trigger: CGGACAGTGATTCCTGCCTCACAGGTGAAGATTAAA...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | TGGATGGAGTTTTCACAAACTAAACCTAATGTGAGTCTATTCCGTCCCCACTTCCTCCCAGCATTTTCCTaGACTATAATGGAGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: WMEFSQTKPNVSLFRPHFLPAFS*TIMEIS Trigger: GGAGATCTCCATTATAGTCCAGGAAAATGCTGGGAG...GAAGTGGGGACGGAATAGACTCACATTAGGTTTAGTTTGTGAAAACTCCATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTCAGTCCAGTTCCGCCTaGATTTTCCCTTTGGATTTG | + |
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Preference number: 4 (lower is better) Translates to: AGLIESVKNPTSSLFFEPQSSSA*IFPLDL Trigger: CAAATCCAAAGGGAAAATCCAGGCGGAACTGGACTG...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | AATTTTTGTGTCTGTGTTAATGAGGGATATGGACCTGTAGTTTTCCTTCCTCTTCAATTATCATCCCCATaGCAACACCACACAGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: NFCVCVNEGYGPVVFLPLQLSSP*QHHTGH Trigger: GTGCCCTGTGTGGTGTTGTCATGGGGATGATAATTG...AAGAGGAAGGAAAACTACAGGTCCATATCCCTCATTAACACAGACACAAAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTAGGACACTGGACATATaGATATGGGAGTCCCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: AGLIESVKNPTSSLFFEPRTLDI*IWESPF Trigger: AAAAGGGGACTCCCATATTCATATGTCCAGTGTCCT...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | ATCATTAGCAAACACTGTGCCCTCAAACCTGCAAGCATGATTCACATTCGTTGTAAACTAAACCTAATGTaGGTCTATTCCGTCCCCACT | + |
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Preference number: 4 (lower is better) Translates to: IISKHCALKPASMIHIRCKLNLM*VYSVPT Trigger: AGTGGGGACGGAATAGACTCACATTAGGTTTAGTTT...ACAACGAATGTGAATCATGCTTGCAGGTTTGAGGGCACAGTGTTTGCTAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR GCA 90 bp | GGTAATGCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGGCGTCTCTCAATTCTaGCTGTCCGTGCTTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GNAGLIESVKNPTSSLFFGVSQF*LSVLSS Trigger: AGAAGAAAGCACGGACAGGCAGAATTGAGAGACGCC...AAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGCATTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | ATCATTAGCAAACACTGTGCCCTCAAACCTGCAAGCATGATTCACATTCGTTGTCATCTGCATTTGCTCTaGAGTCTGAAGACAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: IISKHCALKPASMIHIRCHLHLL*SLKTNP Trigger: AGGATTTGTCTTCAGACTCCAGAGCAAATGCAGATG...ACAACGAATGTGAATCATGCTTGCAGGTTTGAGGGCACAGTGTTTGCTAATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | ATCATTAGCAAACACTGTGCCCTCAAACCTGCAAGCATGATTCACATTCGTTGTCTCCTATCAATACCTTaGATTCCACCTCATGACTCT | + |
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Preference number: 4 (lower is better) Translates to: IISKHCALKPASMIHIRCLLSIP*IPPHDS Trigger: AGAGTCATGAGGTGGAATCCAAGGTATTGATAGGAG...ACAACGAATGTGAATCATGCTTGCAGGTTTGAGGGCACAGTGTTTGCTAATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR TCA 90 bp | GGTAATGCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTCTCCTCTTTATTCTTTaGGCCTCACAAAGCAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GNAGLIESVKNPTSSLFFLLFIL*ASQSRC Trigger: ACACCTGCTTTGTGAGGCTCAAAGAATAAAGAGGAG...AAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGCATTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | AATTTTTGTGTCTGTGTTAATGAGGGATATGGACCTGTAGTTTTCCTTCCTCTTTTCTTTGCCTGGTTTTaGTATCAGGTAATGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: NFCVCVNEGYGPVVFLPLFFAWF*YQVMLG Trigger: GCCCAGCATTACCTGATACCAAAACCAGGCAAAGAA...AAGAGGAAGGAAAACTACAGGTCCATATCCCTCATTAACACAGACACAAAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CCA 90 bp | GGTAATGCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTTCAAGATCGCTTAGCTaGATGGAGTTTTCACAAACT | + |
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Preference number: 4 (lower is better) Translates to: GNAGLIESVKNPTSSLFFSRSLS*MEFSQT Trigger: AGTTTGTGAAAACTCCATCCAGCTAAGCGATCTTGA...AAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGCATTACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR GCA 90 bp | AATTTTTGTGTCTGTGTTAATGAGGGATATGGACCTGTAGTTTTCCTTCCTCTTTTCTTCTGTTTTCTTTaGCTGGTTTTGGTATCAGGT | + |
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Preference number: 4 (lower is better) Translates to: NFCVCVNEGYGPVVFLPLFFCFL*LVLVSG Trigger: ACCTGATACCAAAACCAGGCAAAGAAAACAGAAGAA...AAGAGGAAGGAAAACTACAGGTCCATATCCCTCATTAACACAGACACAAAAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS CCA 90 bp | GGAAGCTGGGGCCACCTGTCGGGAGCACTCTCCCTTGGCTGTGTCTaGGTCTGTGGTGTGGGGCCCTTTAAGCAGGGTCTTCTCTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: GSWGHLSGALSLGCV*VCGVGPFKQGLLCL Trigger: GAGACAGAGAAGACCCTGCTTAAAGGGCCCCACACCACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCGACAGGTGGCCCCAGCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CAA 90 bp | GGAAGCTGGGGCCACCTGTCGGGAGCACTCTCCCTTGGCTGTGTCTGGGTCTGTAAGGCCTGGACAAACTaGCCCGGTCCAGTGACTTGC | + |
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Preference number: 5 (lower is better) Translates to: GSWGHLSGALSLGCVWVCKAWTN*PGPVTC Trigger: GCAAGTCACTGGACCGGGCAAGTTTGTCCAGGCCTT...ACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCGACAGGTGGCCCCAGCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS CCA 90 bp | ACCTGTCGGGAGCACTCTCCCTTGGCTGTGTCTGGGTCTGTGGTGTaGGGCCCTTTAAGCAGGGTCTTCTCTGTCTCATCCCCAGGACAC | + |
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Preference number: 5 (lower is better) Translates to: TCREHSPLAVSGSVV*GPLSRVFSVSSPGH Trigger: GTGTCCTGGGGATGAGACAGAGAAGACCCTGCTTAAAGGGCCCCACACCACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCGACAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS CCA 90 bp | TCTCACACTATGAAAACAGATGACAGCAGGGGTGGATGGATGATTTaGAGGTCAGGCCAGCTGTCTCAGGCGCAGGAGCCGTGGAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: SHTMKTDDSRGGWMI*RSGQLSQAQEPWRG Trigger: GCCTCTCCACGGCTCCTGCGCCTGAGACAGCTGGCCTGACCTCCAAATCATCCATCCACCCCTGCTGTCATCTGTTTTCATAGTGTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS TCA 90 bp | TCAGGCCAGCTGTCTCAGGCGCAGGAGCCGTGGAGAGGCTCTTCATaGACGATGTCAAACTGTGCATTTCTCCCTAGAGCCTCCCTAAAC | + |
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Preference number: 5 (lower is better) Translates to: SGQLSQAQEPWRGSS*TMSNCAFLPRASLN Trigger: GTTTAGGGAGGCTCTAGGGAGAAATGCACAGTTTGACATCGTTCATGAAGAGCCTCTCCACGGCTCCTGCGCCTGAGACAGCTGGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS TCA 90 bp | AGCCATGGATATTCCTGTGGGTTGATCTCACACTATGAAAACAGATaGCAGCAGGGGTGGATGGATGATTTGGAGGTCAGGCCAGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: SHGYSCGLISHYENR*QQGWMDDLEVRPAV Trigger: GACAGCTGGCCTGACCTCCAAATCATCCATCCACCCCTGCTGTCATCTGTTTTCATAGTGTGAGATCAACCCACAGGAATATCCATGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CAA 90 bp | GGTAATGCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTCGGGAGCACTCTCCCTaGGCTGTGTCTGGGTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GNAGLIESVKNPTSSLFFREHSP*AVSGSV Trigger: CACAGACCCAGACACAGCCAAGGGAGAGTGCTCCCG...AAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGCATTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CAA 90 bp | ATCATTAGCAAACACTGTGCCCTCAAACCTGCAAGCATGATTCACATTCGTTGTATACCACCCTACATTTaGTCCCACGTCCACCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: IISKHCALKPASMIHIRCIPPYI*SHVHLP Trigger: TGGGAGGTGGACGTGGGACAAAATGTAGGGTGGTAT...ACAACGAATGTGAATCATGCTTGCAGGTTTGAGGGCACAGTGTTTGCTAATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CAA 90 bp | TGGATGGAGTTTTCACAAACTAAACCTAATGTGAGTCTATTCCGTCCCCACTTCTGTACCCATCTGCATTaGCTCTGGAGTCTGAAGACA | + |
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Preference number: 5 (lower is better) Translates to: WMEFSQTKPNVSLFRPHFCTHLH*LWSLKT Trigger: TGTCTTCAGACTCCAGAGCAAATGCAGATGGGTACA...GAAGTGGGGACGGAATAGACTCACATTAGGTTTAGTTTGTGAAAACTCCATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CAA 90 bp | GCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTGAGCCTCCTCCTCTTTATTCTTaGAGCCTCACAAAGCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: AGLIESVKNPTSSLFFEPPPLYS*SLTKQV Trigger: CACCTGCTTTGTGAGGCTCAAAGAATAAAGAGGAGG...AGGCTCAAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CAA 90 bp | TGGATGGAGTTTTCACAAACTAAACCTAATGTGAGTCTATTCCGTCCCCACTTCGGATATTCCTGTGGGTaGATCTCACACTATGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: WMEFSQTKPNVSLFRPHFGYSCG*ISHYEN Trigger: GTTTTCATAGTGTGAGATCAACCCACAGGAATATCC...GAAGTGGGGACGGAATAGACTCACATTAGGTTTAGTTTGTGAAAACTCCATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS-3UTR CAA 90 bp | GGTAATGCTGGGCTTATAGAATCAGTGAAAAATCCTACCTCCTCTTTATTCTTTCTTCTTCTGTTTTCTTaGCCTGGTTTTGGTATCAGG | + |
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Preference number: 5 (lower is better) Translates to: GNAGLIESVKNPTSSLFFLLLFS*PGFGIR Trigger: CCTGATACCAAAACCAGGCAAAGAAAACAGAAGAAG...AAAGAATAAAGAGGAGGTAGGATTTTTCACTGATTCTATAAGCCCAGCATTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS TCA 72 bp | GCTCCCAGGTGGCCTCCTCATCGTAAATCTGGGAACTaGACCAGCACCCATACAGGCCGATGTCCGAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: APRWPPHRKSGN*TSTHTGRCPRE Trigger: CTCCCTCGGACATCGGCCTGTATGGGTGCTGGTTCAGTTCCCAGATTTACGATGAGGAGGCCACCTGGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS CCA 72 bp | GAGCACTCTCCCTTGGCTGTGTCTGGGTCTGTGGTGTaGGGCCCTTTAAGCAGGGTCTTCTCTGTCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: EHSPLAVSGSVV*GPLSRVFSVSS Trigger: GGATGAGACAGAGAAGACCCTGCTTAAAGGGCCCCACACCACAGACCCAGACACAGCCAAGGGAGAGTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS CCA 72 bp | ATGAAAACAGATGACAGCAGGGGTGGATGGATGATTTaGAGGTCAGGCCAGCTGTCTCAGGCGCAGGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: MKTDDSRGGWMI*RSGQLSQAQEP Trigger: CGGCTCCTGCGCCTGAGACAGCTGGCCTGACCTCCAAATCATCCATCCACCCCTGCTGTCATCTGTTTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS TCA 72 bp | CTGTCTCAGGCGCAGGAGCCGTGGAGAGGCTCTTCATaGACGATGTCAAACTGTGCATTTCTCCCTAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: LSQAQEPWRGSS*TMSNCAFLPRA Trigger: GGCTCTAGGGAGAAATGCACAGTTTGACATCGTTCATGAAGAGCCTCTCCACGGCTCCTGCGCCTGAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS CCA 72 bp | GGAGTCCTTCACAAACTCAGTTCTCCCTCGATACTGTaGCATCTGCTTAGATTCCCAGTCTTCCCCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: GVLHKLSSPSIL*HLLRFPVFPIS Trigger: AGAGATGGGGAAGACTGGGAATCTAAGCAGATGCCACAGTATCGAGGGAGAACTGAGTTTGTGAAGGACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS CCA 72 bp | GTGAGGGCTGGAAAAACGTCTCTCCTATCAATACCTTaGATTCCACCTCATGACTCTGCTCAGCAAGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: VRAGKTSLLSIP*IPPHDSAQQGG Trigger: TCCACCTTGCTGAGCAGAGTCATGAGGTGGAATCCAAGGTATTGATAGGAGAGACGTTTTTCCAGCCCTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS CCA 72 bp | CCGAGTAAAATAGAAGCCAGGCGCCAAGGTGAGGGCTaGAAAAACGTCTCTCCTATCAATACCTTGGATTCC | + |
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Preference number: 6 (lower is better) Translates to: PSKIEARRQGEG*KNVSPINTLDS Trigger: GGAATCCAAGGTATTGATAGGAGAGACGTTTTTCCAGCCCTCACCTTGGCGCCTGGCTTCTATTTTACTCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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| CDS TCA 72 bp | TATTCCTGTGGGTTGATCTCACACTATGAAAACAGATaGCAGCAGGGGTGGATGGATGATTTGGAGGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: YSCGLISHYENR*QQGWMDDLEVR Trigger: CCTGACCTCCAAATCATCCATCCACCCCTGCTGTCATCTGTTTTCATAGTGTGAGATCAACCCACAGGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342868.7 |
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