Pregenerated sensors for BTN3A3 (Homo sapiens)
Ensembl gene IDs: ENSG00000111801Ensembl transcript IDs: ENST00000244519.7, ENST00000361232.7, ENST00000480110.5, ENST00000483179.5
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCATACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGGTTAATTCACCTTTCTaGACCCCAGTTTCCTTATCT | + |
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Preference number: 2 (lower is better) Translates to: PYLQNMTTRQGVVRIKGVVNSPF*TPVSLS Trigger: AGATAAGGAAACTGGGGTGCAGAAAGGTGAATTAAC...CACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| 3UTR-3UTR CCA 90 bp | CCATACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGAAGGGGACAATAAGGTaGTACGAAACTCAAAACAAC | + |
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Preference number: 2 (lower is better) Translates to: PYLQNMTTRQGVVRIKGVKGTIR*YETQNN Trigger: GTTGTTTTGAGTTTCGTACCACCTTATTGTCCCCTT...CACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| 3UTR-3UTR GCA 90 bp | AACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCCTCTTTAGATCCCAGCTCTaGTGTTCACTTGTCATGTCT | + |
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Preference number: 2 (lower is better) Translates to: NCTNYCMSYVSYFMLPCLFRSQL*CSLVMS Trigger: AGACATGACAAGTGAACAGCAGAGCTGGGATCTAAA...GAGGCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| 3UTR-3UTR CCA 90 bp | CCCAACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCAAGGGGACAATAAGGTaGTACGAAACTCAAAACAAC | + |
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Preference number: 2 (lower is better) Translates to: PNCTNYCMSYVSYFMLPCKGTIR*YETQNN Trigger: GTTGTTTTGAGTTTCGTACCACCTTATTGTCCCCTT...GCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| 3UTR-3UTR GCA 90 bp | AACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCCTCGTTAATTCACCTTTCTaGACCCCAGTTTCCTTATCT | + |
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Preference number: 2 (lower is better) Translates to: NCTNYCMSYVSYFMLPCLVNSPF*TPVSLS Trigger: AGATAAGGAAACTGGGGTGCAGAAAGGTGAATTAAC...GAGGCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| 3UTR-3UTR GCA 90 bp | TACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGACAGTTAATGTTAGTTATTaGTGTTTAGATCCCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: YLQNMTTRQGVVRIKGVTVNVSY*CLDPSS Trigger: AGAGCTGGGATCTAAACAGCAATAACTAACATTAAC...TGTCACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| 3UTR-3UTR GCA 90 bp | CCCAACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCGTTAATGTTAGTTATTaGTGTTTAGATCCCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: PNCTNYCMSYVSYFMLPCVNVSY*CLDPSS Trigger: AGAGCTGGGATCTAAACAGCAATAACTAACATTAAC...GCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTTGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR GCA 90 bp | CCATACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGCCTGAAGAAGGGGTCTaGGATGGATATGCTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PYLQNMTTRQGVVRIKGVPEEGV*DGYAGC Trigger: ACAGCCAGCATATCCATCGCAGACCCCTTCTTCAGG...CACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR TCA 90 bp | TACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGACACCAAGCACAGAAAACTaGGCTGAGCAAGGAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: YLQNMTTRQGVVRIKGVTPSTEN*AEQGVS Trigger: GCTCACTCCTTGCTCAGCTCAGTTTTCTGTGCTTGG...TGTCACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR GCA 90 bp | TACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGACACCTGAAGAAGGGGTCTaGGATGGATATGCTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: YLQNMTTRQGVVRIKGVTPEEGV*DGYAGC Trigger: ACAGCCAGCATATCCATCGCAGACCCCTTCTTCAGG...TGTCACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR GCA 90 bp | CCATACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGGTTCTGATTGGTTGTTaGAGAAGGGGAGACCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PYLQNMTTRQGVVRIKGVVLIGC*RRGDLS Trigger: GCTGAGGTCTCCCCTTCTGCAACAACCAATCAGAAC...CACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR TCA 90 bp | CCCAACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCCCAAGCACAGAAAACTaGGCTGAGCAAGGAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: PNCTNYCMSYVSYFMLPCPSTEN*AEQGVS Trigger: GCTCACTCCTTGCTCAGCTCAGTTTTCTGTGCTTGG...GCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR TCA 90 bp | AACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCCTCCACAGAAAACTGAGCTaGGCAAGGAGTGAGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: NCTNYCMSYVSYFMLPCLHRKLS*ARSEQL Trigger: CAGCTGCTCACTCCTTGCTCAGCTCAGTTTTCTGTG...GAGGCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244519.7 |
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| CDS-3UTR TCA 90 bp | CCCAACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCGGATTTTCCTCCACTTaGGTTCCTCCTGGAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PNCTNYCMSYVSYFMLPCGFSST*VPPGAS Trigger: AGAAGCTCCAGGAGGAACTCAAGTGGAGGAAAATCC...GCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244519.7 |
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| CDS-3UTR TCA 90 bp | TACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGACATCACATCCGCAGGTTTaGAGAGGGCCATTTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: YLQNMTTRQGVVRIKGVTSHPQV*RGPFSI Trigger: AATGGAAAATGGCCCTCTTCAAACCTGCGGATGTGA...TGTCACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR TCA 90 bp | AACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCCTCCACAGAAAACTGAGCTaGGCAAGGAGTGAGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NCTNYCMSYVSYFMLPCLHRKLS*ARSEQL Trigger: GAGCTGCTCACTCCTTGCTCAGCTCAGTTTTCTGTG...GAGGCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361232.7 |
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| CDS-3UTR GCA 90 bp | CCCAACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCGTTCTGATTGGTTGTTaGAGAAGGGGAGACCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PNCTNYCMSYVSYFMLPCVLIGC*RRGDLS Trigger: GCTGAGGTCTCCCCTTCTGCAACAACCAATCAGAAC...GCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR GCA 90 bp | TACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGACATACTTCATGTTGCCCTaGCTCAGCTTCCATACTTGC | + |
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Preference number: 4 (lower is better) Translates to: YLQNMTTRQGVVRIKGVTYFMLP*LSFHTC Trigger: GCAAGTATGGAAGCTGAGGCAGGGCAACATGAAGTA...TGTCACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR GCA 90 bp | TACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGACAAGGAGTGAGCAGCTCTaGCAAAAATGTCTGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: YLQNMTTRQGVVRIKGVTRSEQL*QKCLSL Trigger: CAAGGACAGACATTTTTGGCAGAGCTGCTCACTCCT...TGTCACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000361232.7 |
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| CDS-3UTR CCA 90 bp | TACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGACACCACGAGCCATGTACTaGATTTTCCTCCACTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YLQNMTTRQGVVRIKGVTPRAMY*IFLHLS Trigger: ACTCAAGTGGAGGAAAATCCAGTACATGGCTCGTGG...TGTCACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244519.7 |
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| CDS-3UTR CCA 90 bp | CCATACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGGCTTATGGTTCTGATTaGTTGTTGCAGAAGGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PYLQNMTTRQGVVRIKGVAYGSD*LLQKGR Trigger: TCTCCCCTTCTGCAACAACCAATCAGAACCATAAGC...CACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR CCA 90 bp | TACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGACACCACGAGCCATGTACTaGATTTTCCTCCACTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: YLQNMTTRQGVVRIKGVTPRAMY*IFLHSL Trigger: AAGAGAGTGGAGGAAAATCCAGTACATGGCTCGTGG...TGTCACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361232.7 |
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| CDS-3UTR TCA 90 bp | TACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGACATGTAGCTTATGGTTCTaGTTGGTTGTTGCAGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: YLQNMTTRQGVVRIKGVTCSLWF*LVVAEG Trigger: CCCTTCTGCAACAACCAATCAGAACCATAAGCTACA...TGTCACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR TCA 90 bp | TACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGACACACAAGCACTTAAAATaGTCTCTACCCTGCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: YLQNMTTRQGVVRIKGVTHKHLK*SLPCSC Trigger: ACAGCTGCAGGGTAGAGATCATTTTAAGTGCTTGTG...TGTCACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244519.7 |
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| CDS-3UTR CCA 90 bp | CCCAACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCCACTTGAGTTCCTCCTaGAGCTTCTCTCTTAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: PNCTNYCMSYVSYFMLPCHLSSS*SFSLRL Trigger: AAGCCTAAGAGAGAAGCTCCAGGAGGAACTCAAGTG...GCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244519.7 |
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| CDS-3UTR CCA 90 bp | CCATACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGGTCTCTGATATCAGCTaGGAAAGAGTCAATAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: PYLQNMTTRQGVVRIKGVVSDIS*ERVNRD Trigger: ATCCCTATTGACTCTTTCCCAGCTGATATCAGAGAC...CACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244519.7 |
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| CDS-3UTR TCA 90 bp | AACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCCTCTGTAGCTTATGGTTCTaGTTGGTTGTTGCAGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: NCTNYCMSYVSYFMLPCLCSLWF*LVVAEG Trigger: CCCTTCTGCAACAACCAATCAGAACCATAAGCTACA...GAGGCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR GCA 90 bp | CCCAACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCTTTAGATCCCAGCTCTaGTGTTCACTTGTCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: PNCTNYCMSYVSYFMLPCFRSQL*CSLVMS Trigger: AGACATGACAAGTGAACAGCAGAGCTGGGATCTAAA...GCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTTGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR CCA 90 bp | TACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGACAAAGGGGACAATAAGGTaGTACGAAACTCAAAACAAC | + |
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Preference number: 4 (lower is better) Translates to: YLQNMTTRQGVVRIKGVTKGTIR*YETQNN Trigger: GTTGTTTTGAGTTTCGTACCACCTTATTGTCCCCTT...TGTCACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR GCA 90 bp | CCCAACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCGTTAATTCACCTTTCTaGACCCCAGTTTCCTTATCT | + |
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Preference number: 4 (lower is better) Translates to: PNCTNYCMSYVSYFMLPCVNSPF*TPVSLS Trigger: AGATAAGGAAACTGGGGTGCAGAAAGGTGAATTAAC...GCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR GCA 90 bp | AACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCCTCGTTAATGTTAGTTATTaGTGTTTAGATCCCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NCTNYCMSYVSYFMLPCLVNVSY*CLDPSS Trigger: AGAGCTGGGATCTAAACAGCAATAACTAACATTAAC...GAGGCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS TCA 90 bp | CCAAAGACTTCTCTCCACGAGCCATGTACTGGATTTTCCTCCACTTaGGTTCCTCCTGGAGCTTCTCTCTTAGGCTTATTTCTTGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: PKTSLHEPCTGFSST*VPPGASLLGLFLAL Trigger: CAGAGCAAGAAATAAGCCTAAGAGAGAAGCTCCAGGAGGAACTCAAGTGGAGGAAAATCCAGTACATGGCTCGTGGAGAGAAGTCTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000483179.5 |
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| CDS-3UTR CAA 90 bp | TACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGACAGGTTCTGATTGGTTGTaGCAGAAGGGGAGACCTCAG | + |
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Preference number: 5 (lower is better) Translates to: YLQNMTTRQGVVRIKGVTGSDWL*QKGRPQ Trigger: CTGAGGTCTCCCCTTCTGCAACAACCAATCAGAACC...TGTCACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS CCA 90 bp | ATTATACTACAAAAATGTTTCTGGGAGTCACTGATTGGAAAACACTaGCAGCAGATACAGTCACCATTCCACCTCCCAGGACCCACGGTA | + |
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Preference number: 5 (lower is better) Translates to: IILQKCFWESLIGKH*QQIQSPFHLPGPTV Trigger: TACCGTGGGTCCTGGGAGGTGGAATGGTGACTGTATCTGCTGCCAGTGTTTTCCAATCAGTGACTCCCAGAAACATTTTTGTAGTATAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000480110.5 |
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| CDS-3UTR CAA 90 bp | TACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGACATGGATTTTCCTCCACTaGAGTTCCTCCTGGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: YLQNMTTRQGVVRIKGVTWIFLH*SSSWSF Trigger: GAAGCTCCAGGAGGAACTCAAGTGGAGGAAAATCCA...TGTCACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244519.7 |
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| CDS GCA 90 bp | ACCACAACAATAACCAAACATCCCCCATCAGCAATGAGGAATTGCTaGCTCTTCATCATTTACAGCTTTAGTCTCACCCTAGTCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: TTTITKHPPSAMRNC*LFIIYSFSLTLVSF Trigger: GAAGGAGACTAGGGTGAGACTAAAGCTGTAAATGATGAAGAGGCAGCAATTCCTCATTGCTGATGGGGGATGTTTGGTTATTGTTGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000480110.5 |
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| CDS GCA 90 bp | CAAACCACAACAATAACCAAACATCCCCCATCAGCAATGAGGAATTaGTGCCTCTTCATCATTTACAGCTTTAGTCTCACCCTAGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: QTTTITKHPPSAMRN*CLFIIYSFSLTLVS Trigger: GGAGACTAGGGTGAGACTAAAGCTGTAAATGATGAAGAGGCAGCAATTCCTCATTGCTGATGGGGGATGTTTGGTTATTGTTGTGGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000480110.5 |
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| CDS CCA 90 bp | AACATGCCTCATTATACTACAAAAATGTTTCTGGGAGTCACTGATTaGAAAACACTGGCAGCAGATACAGTCACCATTCCACCTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: NMPHYTTKMFLGVTD*KTLAADTVTIPPPR Trigger: CCTGGGAGGTGGAATGGTGACTGTATCTGCTGCCAGTGTTTTCCAATCAGTGACTCCCAGAAACATTTTTGTAGTATAATGAGGCATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000480110.5 |
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| CDS-3UTR CAA 90 bp | AACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCCTCGGTTCTGATTGGTTGTaGCAGAAGGGGAGACCTCAG | + |
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Preference number: 5 (lower is better) Translates to: NCTNYCMSYVSYFMLPCLGSDWL*QKGRPQ Trigger: CTGAGGTCTCCCCTTCTGCAACAACCAATCAGAACC...GAGGCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS-3UTR CAA 90 bp | TACTTGCAAAATATGACTACCCGACAGGGTGTTGTGAGGATTAAAGGAGTGACAGTAAGTTACTTCATGTaGCCCTGCCTCAGCTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: YLQNMTTRQGVVRIKGVTVSYFM*PCLSFH Trigger: ATGGAAGCTGAGGCAGGGCAACATGAAGTAACTTAC...TGTCACTCCTTTAATCCTCACAACACCCTGTCGGGTAGTCATATTTTGCAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS TCA 90 bp | AAGAAACATGCCTCATTATACTACAAAAATGTTTCTGGGAGTCACTaGTTGGAAAACACTGGCAGCAGATACAGTCACCATTCCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: KKHASLYYKNVSGSH*LENTGSRYSHHSTS Trigger: GGAGGTGGAATGGTGACTGTATCTGCTGCCAGTGTTTTCCAATCAGTGACTCCCAGAAACATTTTTGTAGTATAATGAGGCATGTTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000480110.5 |
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| CDS-3UTR CAA 90 bp | AACTGCACAAATTACTGTATGAGTTATGTAAGTTACTTCATGTTGCCCTGCCTCATCACATCCGCAGGTTaGAAGAGGGCCATTTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: NCTNYCMSYVSYFMLPCLITSAG*KRAIFH Trigger: ATGGAAAATGGCCCTCTTCAAACCTGCGGATGTGAT...GAGGCAGGGCAACATGAAGTAACTTACATAACTCATACAGTAATTTGTGCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000361232.7 |
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| CDS TCA 72 bp | GCTCCCACTCTCAGAATTCATCTCCCCACACCTTCCTaGCAGTATCTCATCCAGAGAAGAGAGCTAAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: APTLRIHLPTPS*QYLIQRRELSL Trigger: TAGACTTAGCTCTCTTCTCTGGATGAGATACTGTCAGGAAGGTGTGGGGAGATGAATTCTGAGAGTGGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480110.5 |
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| CDS CAA 90 bp | GCCAAAGACTTCTCTCCACGAGCCATGTACTGGATTTTCCTCCACTaGAGTTCCTCCTGGAGCTTCTCTCTTAGGCTTATTTCTTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: AKDFSPRAMYWIFLH*SSSWSFSLRLISCS Trigger: AGAGCAAGAAATAAGCCTAAGAGAGAAGCTCCAGGAGGAACTCAAGTGGAGGAAAATCCAGTACATGGCTCGTGGAGAGAAGTCTTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000483179.5 |
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| CDS CAA 72 bp | TTCTCTCCACGAGCCATGTACTGGATTTTCCTCCACTaGAGTTCCTCCTGGAGCTTCTCTCTTAGGCTTATT | + |
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Preference number: 6 (lower is better) Translates to: FSPRAMYWIFLH*SSSWSFSLRLI Trigger: AATAAGCCTAAGAGAGAAGCTCCAGGAGGAACTCAAGTGGAGGAAAATCCAGTACATGGCTCGTGGAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244519.7 ENST00000483179.5 |
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| CDS TCA 72 bp | TCTAAAACCTTACTGAGACCTCGCCACAGCTCCCCATaGTGTGTGTTCTTCCTCAAAGCAACAAGTAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SKTLLRPRHSSP*CVFFLKATSKK Trigger: TTTCTTACTTGTTGCTTTGAGGAAGAACACACATCATGGGGAGCTGTGGCGAGGTCTCAGTAAGGTTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480110.5 |
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| CDS GCA 72 bp | ATAACCAAACATCCCCCATCAGCAATGAGGAATTGCTaGCTCTTCATCATTTACAGCTTTAGTCTCACCCTA | + |
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Preference number: 6 (lower is better) Translates to: ITKHPPSAMRNC*LFIIYSFSLTL Trigger: TAGGGTGAGACTAAAGCTGTAAATGATGAAGAGGCAGCAATTCCTCATTGCTGATGGGGGATGTTTGGTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000480110.5 |
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| CDS CAA 90 bp | CTGTATCAGGGAGGGTCTCAATGGGAATCAATGGCAGACTCACATTaGATAATCCAAGGAAGATTTCATTCAGGAGCTATTTACACAAGT | + |
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Preference number: 6 (lower is better) Translates to: LYQGGSQWESMADSH*IIQGRFHSGAIYTS Trigger: ACTTGTGTAAATAGCTCCTGAATGAAATCTTCCTTGGATTATCAAATGTGAGTCTGCCATTGATTCCCATTGAGACCCTCCCTGATACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000480110.5 ENST00000483179.5 |
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