RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BTN3A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000186470

Ensembl transcript IDs: ENST00000356386.6, ENST00000377708.7, ENST00000396934.7, ENST00000396948.5, ENST00000508906.6, ENST00000527422.5, ENST00000532294.1, ENST00000604202.1

Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTaGTGCTGTGTTTGGCCAATGGGAGGCCCAGGCTTGAAGAGGGCC +
Preference number: 1 (lower is better)
Translates to: LSSMDSATGLPCPLV*CCVWPMGGPGLKRA
Trigger: GGCCCTCTTCAAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR GCA 90 bp TCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTaGTGTGTTTGGCCAATGGGAGGCCCAGGCTTGAAGAGGGCCATT +
Preference number: 1 (lower is better)
Translates to: SSMDSATGLPCPLVC*CVWPMGGPGLKRAI
Trigger: AATGGCCCTCTTCAAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR GCA 90 bp TCTCCACCCTCTTCTGGACCCCAGGAATCTGTCCTCTATGGACAGTaGCACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTGGCC +
Preference number: 1 (lower is better)
Translates to: SPPSSGPQESVLYGQ*HWAPLSSGLLLCLA
Trigger: GGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAGAGGGTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR CCA 90 bp CCCTCTTCTGGACCCCAGGAATCTGTCCTCTATGGACAGTGCCACTaGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTGGCCAATGGG +
Preference number: 1 (lower is better)
Translates to: PSSGPQESVLYGQCH*APLSSGLLLCLANG
Trigger: CCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR CCA 90 bp TGCCCTAGATTCACTCTCCAGCCTTCAGCTTTCTCCACCCTCTTCTaGACCCCAGGAATCTGTCCTCTATGGACAGTGCCACTGGGCTCC +
Preference number: 1 (lower is better)
Translates to: CPRFTLQPSAFSTLF*TPGICPLWTVPLGS
Trigger: GGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAGAGGGTGGAGAAAGCTGAAGGCTGGAGAGTGAATCTAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR CAA 90 bp GGACCCCAGGAATCTGTCCTCTATGGACAGTGCCACTGGGCTCCCTaGTCCTCTGGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: GPQESVLYGQCHWAP*SSGLLLCLANGRPR
Trigger: CCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCCTGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR CAA 90 bp TCTGTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTaGCTGCTGTGTTTGGCCAATGGGAGGCCCAGGCTTGAAGAGGGC +
Preference number: 2 (lower is better)
Translates to: SVLYGQCHWAPLSSG*LLCLANGRPRLEEG
Trigger: GCCCTCTTCAAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR-3UTR CCA 90 bp CAGCTTTCTCCACCCTCTTCTGGACCCCAGGAATCTGTCCTCTATGGACAGTGCGGCTCCCTTGTCCTCTaGTTTGCTGCTGTGTTTGGC +
Preference number: 2 (lower is better)
Translates to: QLSPPSSGPQESVLYGQCGSLVL*FAAVFG
Trigger: GCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCC...GCACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAGAGGGTGGAGAAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR-3UTR TCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGCTAGGATTACAGGCATaGGCTGCTGTGCTGGCCCTC +
Preference number: 2 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTLGLQA*AAVLAL
Trigger: GAGGGCCAGCACAGCAGCTCATGCCTGTAATCCTAG...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR GCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGTGCCTTCCGGGTTCATaGCATTCTCCTGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTCLPGS*HSPASA
Trigger: GGCTGAGGCAGGAGAATGGCATGAACCCGGAAGGCA...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR GCA 90 bp TCAGCTTTCTCCACCCTCTTCTGGACCCCAGGAATCTGTCCTCTATGGACAGTGTGTCCTCTGGTTTGCTaGTGTGTTTGGCCAATGGGA +
Preference number: 2 (lower is better)
Translates to: SAFSTLFWTPGICPLWTVCPLVC*CVWPMG
Trigger: TCCCATTGGCCAAACACAGCAGCAAACCAGAGGACA...CACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAGAGGGTGGAGAAAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR-3UTR CCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGTTGTCTGGTAGGTCATaGGGCTCCTCAGCACGCTGT +
Preference number: 2 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTLSGRS*GSSARC
Trigger: ACAGCGTGCTGAGGAGCCCCATGACCTACCAGACAA...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR GCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTCTCCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNSPRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGGAGA...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR GCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGTCTCCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMSPRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGGAGA...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR GCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACTCTCCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHSPRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGGAGA...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGTCTGACTGGCTGTTGTaGAGGGTGAGACCCTTAGCT +
Preference number: 2 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTSDWLL*RVRPLA
Trigger: AGCTAAGGGTCTCACCCTCCACAACAGCCAGTCAGA...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGGATCTCCTGACCTTGTaGTCCGCCCTCCTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMDLLTL*SALLSL
Trigger: AAGGCTGAGGAGGGCGGATCACAAGGTCAGGAGATC...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACGATCTCCTGACCTTGTaGTCCGCCCTCCTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNDLLTL*SALLSL
Trigger: AAGGCTGAGGAGGGCGGATCACAAGGTCAGGAGATC...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR GCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGTGCCTTCCGGGTTCATaGCATTCTCCTGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMCLPGS*HSPASA
Trigger: GGCTGAGGCAGGAGAATGGCATGAACCCGGAAGGCA...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGAGGTGGAGCCTCATCTaGAGCATTTCCTCACCAGGC +
Preference number: 2 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMRWSLI*SISSPG
Trigger: GCCTGGTGAGGAAATGCTTCAGATGAGGCTCCACCT...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACAGGTGGAGCCTCATCTaGAGCATTTCCTCACCAGGC +
Preference number: 2 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNRWSLI*SISSPG
Trigger: GCCTGGTGAGGAAATGCTTCAGATGAGGCTCCACCT...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGATGGTCTTGATCTCCTaGCCTTGTGATCCGCCCTCC +
Preference number: 2 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMMVLIS*PCDPPS
Trigger: GGAGGGCGGATCACAAGGTCAGGAGATCAAGACCAT...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACATGGTCTTGATCTCCTaGCCTTGTGATCCGCCCTCC +
Preference number: 2 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHMVLIS*PCDPPS
Trigger: GGAGGGCGGATCACAAGGTCAGGAGATCAAGACCAT...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR GCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGCCCGTGTCCCTAGCCTaGCCTGAATGTGATTCTCTC +
Preference number: 2 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMPVSLA*PECDSL
Trigger: GAGAGAATCACATTCAGGGCAGGCTAGGGACACGGG...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR GCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACCCCGTGTCCCTAGCCTaGCCTGAATGTGATTCTCTC +
Preference number: 2 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNPVSLA*PECDSL
Trigger: GAGAGAATCACATTCAGGGCAGGCTAGGGACACGGG...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGTTGTCTGGTAGGTCATaGGGCTCCTCAGCACGCTGT +
Preference number: 2 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMLSGRS*GSSARC
Trigger: ACAGCGTGCTGAGGAGCCCCATGACCTACCAGACAA...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTTGTCTGGTAGGTCATaGGGCTCCTCAGCACGCTGT +
Preference number: 2 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNLSGRS*GSSARC
Trigger: ACAGCGTGCTGAGGAGCCCCATGACCTACCAGACAA...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGCTTTATGGTTCTGACTaGCTGTTGTGGAGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTLYGSD*LLWRVR
Trigger: TCTCACCCTCCACAACAGCCAGTCAGAACCATAAAG...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACCACAACCACTCACAGTaGTCTCGATCCTGGAGCTGT +
Preference number: 2 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHHNHSQ*SRSWSC
Trigger: ACAGCTCCAGGATCGAGATCACTGTGAGTGGTTGTG...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR GCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGAGGCATGAGCTGCTGTaGTGGCCCTCAGAGGTTAAT +
Preference number: 2 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMRHELL*WPSEVN
Trigger: ATTAACCTCTGAGGGCCAGCACAGCAGCTCATGCCT...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR GCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACAGGCATGAGCTGCTGTaGTGGCCCTCAGAGGTTAAT +
Preference number: 2 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHRHELL*WPSEVN
Trigger: ATTAACCTCTGAGGGCCAGCACAGCAGCTCATGCCT...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACTCTGACTGGCTGTTGTaGAGGGTGAGACCCTTAGCT +
Preference number: 2 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHSDWLL*RVRPLA
Trigger: AGCTAAGGGTCTCACCCTCCACAACAGCCAGTCAGA...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTCTGACTGGCTGTTGTaGAGGGTGAGACCCTTAGCT +
Preference number: 2 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNSDWLL*RVRPLA
Trigger: AGCTAAGGGTCTCACCCTCCACAACAGCCAGTCAGA...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGCCAGTAGTGTCTCTCTaGCATGAAGCTTTCACAGCC +
Preference number: 2 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMPVVSL*HEAFTA
Trigger: GGCTGTGAAAGCTTCATGTCAGAGAGACACTACTGG...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACCCAGTAGTGTCTCTCTaGCATGAAGCTTTCACAGCC +
Preference number: 2 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNPVVSL*HEAFTA
Trigger: GGCTGTGAAAGCTTCATGTCAGAGAGACACTACTGG...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACCATCAATGTCATTGGTaGAAGCCCCAGGGGTCTAGT +
Preference number: 2 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNHQCHW*KPQGSS
Trigger: ACTAGACCCCTGGGGCTTTCACCAATGACATTGATG...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACCATCAATGTCATTGGTaGAAGCCCCAGGGGTCTAGT +
Preference number: 2 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHHQCHW*KPQGSS
Trigger: ACTAGACCCCTGGGGCTTTCACCAATGACATTGATG...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGGGCATTTGCCATGTCTaGATACAGAATTACATCTGC +
Preference number: 2 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTGICHV*IQNYIC
Trigger: GCAGATGTAATTCTGTATCCAGACATGGCAAATGCC...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACGCTCTGATAATCAGCTaGGAAGGAGTCCATAGGGGT +
Preference number: 2 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHALIIS*EGVHRG
Trigger: ACCCCTATGGACTCCTTCCCAGCTGATTATCAGAGC...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACAGTGTCTCTCTGACATaGAGCTTTCACAGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHSVSLT*SFHSQA
Trigger: TGCTTGGCTGTGAAAGCTTCATGTCAGAGAGACACT...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACAGTGTCTCTCTGACATaGAGCTTTCACAGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNSVSLT*SFHSQA
Trigger: TGCTTGGCTGTGAAAGCTTCATGTCAGAGAGACACT...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGAGTGTCTCTCTGACATaGAGCTTTCACAGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMSVSLT*SFHSQA
Trigger: TGCTTGGCTGTGAAAGCTTCATGTCAGAGAGACACT...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACCCAAATGAGACTACCTaGCAGGGTGTTGTGAGGATT +
Preference number: 2 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHPNETT*QGVVRI
Trigger: AATCCTCACAACACCCTGTCAGGTAGTCTCATTTGG...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR TCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACTCCATACTTGCCAAATaGGACTACCTGACAGGGTGT +
Preference number: 2 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHSILAK*DYLTGC
Trigger: ACACCCTGTCAGGTAGTCTCATTTGGCAAGTATGGA...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR GCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACATGTTGCCCTGCCTCTaGTTCCATACTTGCCAAATG +
Preference number: 2 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHMLPCL*FHTCQM
Trigger: CATTTGGCAAGTATGGAAGCAGAGGCAGGGCAACAT...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR GCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACTCTTTCAAAGTCACATaGCCTGTGGGAACTGCAACG +
Preference number: 2 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHSFKVT*PVGTAT
Trigger: CGTTGCAGTTCCCACAGGGCATGTGACTTTGAAAGA...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACCTTTATGGTTCTGACTaGCTGTTGTGGAGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNLYGSD*LLWRVR
Trigger: TCTCACCCTCCACAACAGCCAGTCAGAACCATAAAG...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACCTTTATGGTTCTGACTaGCTGTTGTGGAGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHLYGSD*LLWRVR
Trigger: TCTCACCCTCCACAACAGCCAGTCAGAACCATAAAG...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACAAGGGGCCAATAAGGTaGCACCAAACTCAAACAACT +
Preference number: 2 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHKGPIR*HQTQTT
Trigger: AGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTT...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR GCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGTTCACTATTCCTGTCTaGTTTGTAAAGTCAATACAC +
Preference number: 2 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTFTIPV*FVKSIH
Trigger: GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAA...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGGGCATTTGCCATGTCTaGATACAGAATTACATCTGC +
Preference number: 2 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMGICHV*IQNYIC
Trigger: GCAGATGTAATTCTGTATCCAGACATGGCAAATGCC...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR CAA 90 bp AATTCTCCATTAATGTTAGTCATTGTTGTTCAGATCCCAGCTCTGTaGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACTTTTCT +
Preference number: 2 (lower is better)
Translates to: NSPLMLVIVVQIPAL*FTIPVCFVKSIHFS
Trigger: AGAAAAGTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTGAACAACAATGACTAACATTAATGGAGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR GCA 72 bp GACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTaGTGTGTTTGGCCAATGGGAGGCCCAGGCTTGAAG +
Preference number: 3 (lower is better)
Translates to: DSATGLPCPLVC*CVWPMGGPGLK
Trigger: CTTCAAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR CCA 72 bp CCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTaGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: PLWTVPLGSLVL*FAAVFGQWEAQ
Trigger: CTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR CCA 72 bp ACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTaGCCAATGGGAGGCCCAGGCTTGAAGAGGGCCATT +
Preference number: 3 (lower is better)
Translates to: TGLPCPLVCCCV*PMGGPGLKRAI
Trigger: AATGGCCCTCTTCAAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR GCA 72 bp TCTTCTGGACCCCAGGAATCTGTCCTCTATGGACAGTaGCACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: SSGPQESVLYGQ*HWAPLSSGLLL
Trigger: CAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR CCA 72 bp GGACCCCAGGAATCTGTCCTCTATGGACAGTGCCACTaGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTG +
Preference number: 3 (lower is better)
Translates to: GPQESVLYGQCH*APLSSGLLLCL
Trigger: CAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCCTGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR CCA 72 bp TCCACCCTCTTCTGGACCCCAGGAATCTGTCCTCTATaGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTT +
Preference number: 3 (lower is better)
Translates to: STLFWTPGICPL*TVPLGSLVLWF
Trigger: AAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAGAGGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR-3UTR CAA 90 bp TGGGCTCTGTGTGGGGCCTTATATGCCCTAGATTCACTCTCCAGCCTTCAGCTTATGGGAGGCCCAGGCTaGAAGAGGGCCATTTTTCCA +
Preference number: 3 (lower is better)
Translates to: WALCGALYALDSLSSLQLMGGPG*KRAIFP
Trigger: TGGAAAAATGGCCCTCTTCAAGCCTGGGCCTCCCAT...AAGCTGAAGGCTGGAGAGTGAATCTAGGGCATATAAGGCCCCACACAGAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR TCA 72 bp CTGCCTCTGCTTCCATACTTGCCAAATGAGACTACCTaGCAGGGTGTTGTGAGGATTAAAGGAGTGACACCC +
Preference number: 3 (lower is better)
Translates to: LPLLPYLPNETT*QGVVRIKGVTP
Trigger: GGGTGTCACTCCTTTAATCCTCACAACACCCTGTCAGGTAGTCTCATTTGGCAAGTATGGAAGCAGAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CAA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACGGTTCTGACTGGCTGTaGTGGAGGGTGAGACCCTTA +
Preference number: 3 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHGSDWL*WRVRPL
Trigger: TAAGGGTCTCACCCTCCACAACAGCCAGTCAGAACC...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CAA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGGGTTCTGACTGGCTGTaGTGGAGGGTGAGACCCTTA +
Preference number: 3 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMGSDWL*WRVRPL
Trigger: TAAGGGTCTCACCCTCCACAACAGCCAGTCAGAACC...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR GCA 72 bp GTGAGTTATGTAAGCTACTTAATGTTGCCCTGCCTCTaGTTCCATACTTGCCAAATGAGACTACCTGACAGG +
Preference number: 3 (lower is better)
Translates to: VSYVSYLMLPCL*FHTCQMRLPDR
Trigger: CCTGTCAGGTAGTCTCATTTGGCAAGTATGGAAGCAGAGGCAGGGCAACATTAAGTAGCTTACATAACTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR-3UTR CAA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACGCCATTTTTCCAGGCTaGAAGAGGGCCATTTTTCCA +
Preference number: 3 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNAIFPG*KRAIFP
Trigger: TGGAAAAATGGCCCTCTTCAAGCCTGGAAAAATGGC...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356386.6
3UTR-3UTR CAA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACGTAAGCTACTTAATGTaGCCCTGCCTCTGCTTCCAT +
Preference number: 3 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHVSYLM*PCLCFH
Trigger: ATGGAAGCAGAGGCAGGGCAACATTAAGTAGCTTAC...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp ACCCCAGGAATCTGTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGGTTTGCTGCTGTGTTTaGCCAATGGGAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TPGICPLWTVPLGSLVLWVCCCV*PMGGPG
Trigger: GCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAAC...CCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp TGTCCTCTGGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCAGGCTTGAAGAGGGTTTGCTGCTGTGTTTaGCCAATGGGAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CPLVCCCVWPMGGPGLKRVCCCV*PMGGPG
Trigger: GCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAAC...CCTCTTCAAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp ACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCAGGCTCCCTTGTCCTCTaGTTTGCTGCTGTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: TGLPCPLVCCCVWPMGGPGSLVL*FAAVFG
Trigger: GCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCC...TGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp GCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCAGGCTTTATGGACAGTGCCACTaGGCTCCCTTGTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: APLSSGLLLCLANGRPRLYGQCH*APLSSG
Trigger: ACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATA...AAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR CAA 72 bp TATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTaGCTGCTGTGTTTGGCCAATGGGAGGCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: YGQCHWAPLSSG*LLCLANGRPRL
Trigger: AAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp CCCAGGAATCTGTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTATGGACAGTGCCACTaGGCTCCCTTGTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PRNLSSMDSATGLPCPLVYGQCH*APLSSG
Trigger: ACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATA...AACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp TCTGTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGGGAATCTGTCCTCTATaGACAGTGCCACTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SVLYGQCHWAPLSSGLLLGICPL*TVPLGS
Trigger: GGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCC...CAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp CTTCTGGACCCCAGGAATCTGTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTGGAATCTGTCCTCTATaGACAGTGCCACTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LLDPRNLSSMDSATGLPCGICPL*TVPLGS
Trigger: GGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCC...ACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp GCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCAGGCTTTTCTCCACCCTCTTCTaGACCCCAGGAATCTGTCCT +
Preference number: 4 (lower is better)
Translates to: APLSSGLLLCLANGRPRLFSTLF*TPGICP
Trigger: AGGACAGATTCCTGGGGTCCAGAAGAGGGTGGAGAA...AAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
3UTR CAA 72 bp GAATCTGTCCTCTATGGACAGTGCCACTGGGCTCCCTaGTCCTCTGGTTTGCTGCTGTGTTTGGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: ESVLYGQCHWAP*SSGLLLCLANG
Trigger: CCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR GCA 90 bp CAGCTTTCTCCACCCTCTTCTGGACCCCAGGAATCTGTCCTCTATGGACAGTGCCCTGAAGAAGGGGTCTaGGATGGAAATGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QLSPPSSGPQESVLYGQCPEEGV*DGNAGC
Trigger: ACAGCCAGCATTTCCATCGCAGACCCCTTCTTCAGG...GCACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAGAGGGTGGAGAAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR GCA 90 bp CCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTCCTGAAGAAGGGGTCTaGGATGGAAATGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PLWTVPLGSLVLWFAAVFPEEGV*DGNAGC
Trigger: ACAGCCAGCATTTCCATCGCAGACCCCTTCTTCAGG...AAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR GCA 90 bp TGTCCTCTGGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCAGGCTTGAAGAGGTGTCCTCTGGTTTGCTaGTGTGTTTGGCCAATGGGA +
Preference number: 4 (lower is better)
Translates to: CPLVCCCVWPMGGPGLKRCPLVC*CVWPMG
Trigger: TCCCATTGGCCAAACACAGCAGCAAACCAGAGGACA...CCTCTTCAAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR GCA 90 bp GTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTGTCCTCTGGTTTGCTaGTGTGTTTGGCCAATGGGA +
Preference number: 4 (lower is better)
Translates to: VLYGQCHWAPLSSGLLLCCPLVC*CVWPMG
Trigger: TCCCATTGGCCAAACACAGCAGCAAACCAGAGGACA...ACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR GCA 90 bp TGTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGCCTTGTCCTCTGGTTTaGTGCTGTGTTTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: CPLWTVPLGSLVLWFAAVPCPLV*CCVWPM
Trigger: CATTGGCCAAACACAGCAGCAAACCAGAGGACAAGG...CACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp GTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTCTCTTGAGTTCCTCCTaGAGGCTCTCTCTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: VLYGQCHWAPLSSGLLLCLLSSS*RLSLRL
Trigger: AAGCCTAAGAGAGAGCCTCCAGGAGGAACTCAAGAG...ACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp TCAGCTTTCTCCACCCTCTTCTGGACCCCAGGAATCTGTCCTCTATGGACAGTGGGCTCCCTTGTCCTCTaGTTTGCTGCTGTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: SAFSTLFWTPGICPLWTVGSLVL*FAAVFG
Trigger: GCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCC...CACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAGAGGGTGGAGAAAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR TCA 90 bp GCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCAGGCTTATTAGAGCATCAGGCTaGCTTATTGGTATCGGACGA +
Preference number: 4 (lower is better)
Translates to: APLSSGLLLCLANGRPRLIRASG*LIGIGR
Trigger: TCGTCCGATACCAATAAGTCAGCCTGATGCTCTAAT...AAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR GCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGTCTCCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTSPRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGGAGA...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR GCA 90 bp TTGTCCTCTGGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCAGGCTTGAAGAGCCTTGTCCTCTGGTTTaGTGCTGTGTTTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: LSSGLLLCLANGRPRLEEPCPLV*CCVWPM
Trigger: CATTGGCCAAACACAGCAGCAAACCAGAGGACAAGG...CTCTTCAAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp CCAGGAATCTGTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTCTCTTGAGTTCCTCCTaGAGGCTCTCTCTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: PGICPLWTVPLGSLVLWFLLSSS*RLSLRL
Trigger: AAGCCTAAGAGAGAGCCTCCAGGAGGAACTCAAGAG...AAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp TGGGCTCTGTGTGGGGCCTTATATGCCCTAGATTCACTCTCCAGCCTTCAGCTTTTCTCCACCCTCTTCTaGACCCCAGGAATCTGTCCT +
Preference number: 4 (lower is better)
Translates to: WALCGALYALDSLSSLQLFSTLF*TPGICP
Trigger: AGGACAGATTCCTGGGGTCCAGAAGAGGGTGGAGAA...AAGCTGAAGGCTGGAGAGTGAATCTAGGGCATATAAGGCCCCACACAGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR TCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGGATCTCCTGACCTTGTaGTCCGCCCTCCTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTDLLTL*SALLSL
Trigger: AAGGCTGAGGAGGGCGGATCACAAGGTCAGGAGATC...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp TTGTCCTCTGGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCAGGCTTGAAGAGCCTTGGTATTCCCATTaGAGAATCAGAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: LSSGLLLCLANGRPRLEEPWYSH*RIRAHR
Trigger: TCTGTGGGCTCTGATTCTCCAATGGGAATACCAAGG...CTCTTCAAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp TGGGCTCTGTGTGGGGCCTTATATGCCCTAGATTCACTCTCCAGCCTTCAGCTTCCTTGGTATTCCCATTaGAGAATCAGAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: WALCGALYALDSLSSLQLPWYSH*RIRAHR
Trigger: TCTGTGGGCTCTGATTCTCCAATGGGAATACCAAGG...AAGCTGAAGGCTGGAGAGTGAATCTAGGGCATATAAGGCCCCACACAGAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp TGTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTGGAAAACCATCCCTTaGTATTCCCATTGGAGAATC +
Preference number: 4 (lower is better)
Translates to: CPLWTVPLGSLVLWFAAVWKTIP*YSHWRI
Trigger: GATTCTCCAATGGGAATACCAAGGGATGGTTTTCCA...CACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396948.5
CDS-3UTR CCA 90 bp ACCCCAGGAATCTGTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGCACTTTCTATCTCACTaGACAGAGCAGTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: TPGICPLWTVPLGSLVLWHFLSH*TEQLFP
Trigger: AGGAAATAACTGCTCTGTCCAGTGAGATAGAAAGTG...CCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp TCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTGGATCAGGCTGACTTATTaGTATCGGACGAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: SMDSATGLPCPLVCCCVWIRLTY*YRTKTP
Trigger: AGGAGTCTTCGTCCGATACCAATAAGTCAGCCTGAT...CCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp CAGCTTTCTCCACCCTCTTCTGGACCCCAGGAATCTGTCCTCTATGGACAGTGCATCAGGCTGACTTATTaGTATCGGACGAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: QLSPPSSGPQESVLYGQCIRLTY*YRTKTP
Trigger: AGGAGTCTTCGTCCGATACCAATAAGTCAGCCTGAT...GCACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAGAGGGTGGAGAAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR GCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGCCTGAAGAAGGGGTCTaGGATGGAAATGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTPEEGV*DGNAGC
Trigger: ACAGCCAGCATTTCCATCGCAGACCCCTTCTTCAGG...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR GCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGAGGCATGAGCTGCTGTaGTGGCCCTCAGAGGTTAAT +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTRHELL*WPSEVN
Trigger: ATTAACCTCTGAGGGCCAGCACAGCAGCTCATGCCT...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp GGCCTTATATGCCCTAGATTCACTCTCCAGCCTTCAGCTTTCTCCACCCTCTTCATTAGAGCATCAGGCTaGCTTATTGGTATCGGACGA +
Preference number: 4 (lower is better)
Translates to: GLICPRFTLQPSAFSTLFIRASG*LIGIGR
Trigger: TCGTCCGATACCAATAAGTCAGCCTGATGCTCTAAT...GAAGAGGGTGGAGAAAGCTGAAGGCTGGAGAGTGAATCTAGGGCATATAAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR TCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGCCAGTAGTGTCTCTCTaGCATGAAGCTTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTPVVSL*HEAFTA
Trigger: GGCTGTGAAAGCTTCATGTCAGAGAGACACTACTGG...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACCTAGGATTACAGGCATaGGCTGCTGTGCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHLGLQA*AAVLAL
Trigger: GAGGGCCAGCACAGCAGCTCATGCCTGTAATCCTAG...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGCTAGGATTACAGGCATaGGCTGCTGTGCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMLGLQA*AAVLAL
Trigger: GAGGGCCAGCACAGCAGCTCATGCCTGTAATCCTAG...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACGATCTCCTGACCTTGTaGTCCGCCCTCCTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHDLLTL*SALLSL
Trigger: AAGGCTGAGGAGGGCGGATCACAAGGTCAGGAGATC...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGCATCAATGTCATTGGTaGAAGCCCCAGGGGTCTAGT +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTHQCHW*KPQGSS
Trigger: ACTAGACCCCTGGGGCTTTCACCAATGACATTGATG...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR GCA 90 bp TCTGTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTTTTCATCTATGCTCTaGCAAAAATGTCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SVLYGQCHWAPLSSGLLLFSSML*QKCLSL
Trigger: CAAGGACAGACATTTTTGGCAGAGCATAGATGAAAA...CAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396948.5
CDS-3UTR GCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACTGCCTTCCGGGTTCATaGCATTCTCCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHCLPGS*HSPASA
Trigger: GGCTGAGGCAGGAGAATGGCATGAACCCGGAAGGCA...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGCTCTTGAGTTCCTCCTaGAGGCTCTCTCTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTLLSSS*RLSLRL
Trigger: AAGCCTAAGAGAGAGCCTCCAGGAGGAACTCAAGAG...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGGCTCTGATAATCAGCTaGGAAGGAGTCCATAGGGGT +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTALIIS*EGVHRG
Trigger: ACCCCTATGGACTCCTTCCCAGCTGATTATCAGAGC...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGAGTGTCTCTCTGACATaGAGCTTTCACAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTSVSLT*SFHSQA
Trigger: TGCTTGGCTGTGAAAGCTTCATGTCAGAGAGACACT...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACAGGTGGAGCCTCATCTaGAGCATTTCCTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHRWSLI*SISSPG
Trigger: GCCTGGTGAGGAAATGCTTCAGATGAGGCTCCACCT...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp CCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTAAGCATTTCCTCACCTaGAAAATGGGGATAAACATA +
Preference number: 4 (lower is better)
Translates to: PLWTVPLGSLVLWFAAVFKHFLT*KMGINI
Trigger: TATGTTTATCCCCATTTTTCAGGTGAGGAAATGCTT...AAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396948.5
CDS-3UTR GCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGTCTTTCAAAGTCACATaGCCTGTGGGAACTGCAACG +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTSFKVT*PVGTAT
Trigger: CGTTGCAGTTCCCACAGGGCATGTGACTTTGAAAGA...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp TCAGCTTTCTCCACCCTCTTCTGGACCCCAGGAATCTGTCCTCTATGGACAGTGCACTTTCTATCTCACTaGACAGAGCAGTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: SAFSTLFWTPGICPLWTVHFLSH*TEQLFP
Trigger: AGGAAATAACTGCTCTGTCCAGTGAGATAGAAAGTG...CACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAGAGGGTGGAGAAAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACTTGTCTGGTAGGTCATaGGGCTCCTCAGCACGCTGT +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHLSGRS*GSSARC
Trigger: ACAGCGTGCTGAGGAGCCCCATGACCTACCAGACAA...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGATTAGAGCATCAGGCTaGCTTATTGGTATCGGACGA +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTIRASG*LIGIGR
Trigger: TCGTCCGATACCAATAAGTCAGCCTGATGCTCTAAT...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACCACAACCACTCACAGTaGTCTCGATCCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNHNHSQ*SRSWSC
Trigger: ACAGCTCCAGGATCGAGATCACTGTGAGTGGTTGTG...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR GCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACCCTGAAGAAGGGGTCTaGGATGGAAATGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHPEEGV*DGNAGC
Trigger: ACAGCCAGCATTTCCATCGCAGACCCCTTCTTCAGG...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR GCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGCCTGAAGAAGGGGTCTaGGATGGAAATGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMPEEGV*DGNAGC
Trigger: ACAGCCAGCATTTCCATCGCAGACCCCTTCTTCAGG...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR GCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACAGGCATGAGCTGCTGTaGTGGCCCTCAGAGGTTAAT +
Preference number: 4 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNRHELL*WPSEVN
Trigger: ATTAACCTCTGAGGGCCAGCACAGCAGCTCATGCCT...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGATCAGGCTGACTTATTaGTATCGGACGAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTIRLTY*YRTKTP
Trigger: AGGAGTCTTCGTCCGATACCAATAAGTCAGCCTGAT...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGTCTGACTGGCTGTTGTaGAGGGTGAGACCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMSDWLL*RVRPLA
Trigger: AGCTAAGGGTCTCACCCTCCACAACAGCCAGTCAGA...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGAAGGGGCCAATAAGGTaGCACCAAACTCAAACAACT +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTKGPIR*HQTQTT
Trigger: AGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTT...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGAAGTCACATGCCCTGTaGGAACTGCAACGTTATTCT +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTKSHAL*ELQRYS
Trigger: AGAATAACGTTGCAGTTCCCACAGGGCATGTGACTT...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACCCAGTAGTGTCTCTCTaGCATGAAGCTTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHPVVSL*HEAFTA
Trigger: GGCTGTGAAAGCTTCATGTCAGAGAGACACTACTGG...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGATTGTCTTCTCACCATaGGAAACAGTAAGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTIVFSP*ETVRVA
Trigger: AGCGACTCTTACTGTTTCTCATGGTGAGAAGACAAT...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGTGGAAAACCATCCCTTaGTATTCCCATTGGAGAATC +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTWKTIP*YSHWRI
Trigger: GATTCTCCAATGGGAATACCAAGGGATGGTTTTCCA...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000508906.6
CDS-3UTR CCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACCTCTTGAGTTCCTCCTaGAGGCTCTCTCTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNLLSSS*RLSLRL
Trigger: AAGCCTAAGAGAGAGCCTCCAGGAGGAACTCAAGAG...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACCTCTTGAGTTCCTCCTaGAGGCTCTCTCTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHLLSSS*RLSLRL
Trigger: AAGCCTAAGAGAGAGCCTCCAGGAGGAACTCAAGAG...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGGCTCTGATAATCAGCTaGGAAGGAGTCCATAGGGGT +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMALIIS*EGVHRG
Trigger: ACCCCTATGGACTCCTTCCCAGCTGATTATCAGAGC...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACGCTCTGATAATCAGCTaGGAAGGAGTCCATAGGGGT +
Preference number: 4 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNALIIS*EGVHRG
Trigger: ACCCCTATGGACTCCTTCCCAGCTGATTATCAGAGC...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACCCAAATGAGACTACCTaGCAGGGTGTTGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNPNETT*QGVVRI
Trigger: AATCCTCACAACACCCTGTCAGGTAGTCTCATTTGG...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTCCATACTTGCCAAATaGGACTACCTGACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNSILAK*DYLTGC
Trigger: ACACCCTGTCAGGTAGTCTCATTTGGCAAGTATGGA...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR GCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGATGTTGCCCTGCCTCTaGTTCCATACTTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMMLPCL*FHTCQM
Trigger: CATTTGGCAAGTATGGAAGCAGAGGCAGGGCAACAT...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR GCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACATGCCCTGTGGGAACTaGAACGTTATTCTCTCAACC +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHMPCGN*NVILST
Trigger: GGTTGAGAGAATAACGTTGCAGTTCCCACAGGGCAT...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR GCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGATGCCCTGTGGGAACTaGAACGTTATTCTCTCAACC +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMMPCGN*NVILST
Trigger: GGTTGAGAGAATAACGTTGCAGTTCCCACAGGGCAT...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR GCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTCTTTCAAAGTCACATaGCCTGTGGGAACTGCAACG +
Preference number: 4 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNSFKVT*PVGTAT
Trigger: CGTTGCAGTTCCCACAGGGCATGTGACTTTGAAAGA...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGCCTTGGTATTCCCATTaGAGAATCAGAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMPWYSH*RIRAHR
Trigger: TCTGTGGGCTCTGATTCTCCAATGGGAATACCAAGG...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACCCTTGGTATTCCCATTaGAGAATCAGAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNPWYSH*RIRAHR
Trigger: TCTGTGGGCTCTGATTCTCCAATGGGAATACCAAGG...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACCCTTGGTATTCCCATTaGAGAATCAGAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHPWYSH*RIRAHR
Trigger: TCTGTGGGCTCTGATTCTCCAATGGGAATACCAAGG...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGCACTTTCTATCTCACTaGACAGAGCAGTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTHFLSH*TEQLFP
Trigger: AGGAAATAACTGCTCTGTCCAGTGAGATAGAAAGTG...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGATTAGAGCATCAGGCTaGCTTATTGGTATCGGACGA +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMIRASG*LIGIGR
Trigger: TCGTCCGATACCAATAAGTCAGCCTGATGCTCTAAT...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACATTAGAGCATCAGGCTaGCTTATTGGTATCGGACGA +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHIRASG*LIGIGR
Trigger: TCGTCCGATACCAATAAGTCAGCCTGATGCTCTAAT...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR GCA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGTGCCATTTTCATCTATaGTCTGCCAAAAATGTCTGT +
Preference number: 4 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTCHFHL*SAKNVC
Trigger: ACAGACATTTTTGGCAGAGCATAGATGAAAATGGCA...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356386.6
ENST00000377708.7
CDS-3UTR CCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACATCAGGCTGACTTATTaGTATCGGACGAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHIRLTY*YRTKTP
Trigger: AGGAGTCTTCGTCCGATACCAATAAGTCAGCCTGAT...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACATCAGGCTGACTTATTaGTATCGGACGAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNIRLTY*YRTKTP
Trigger: AGGAGTCTTCGTCCGATACCAATAAGTCAGCCTGAT...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGAAGGGGCCAATAAGGTaGCACCAAACTCAAACAACT +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMKGPIR*HQTQTT
Trigger: AGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTT...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGAAGTCACATGCCCTGTaGGAACTGCAACGTTATTCT +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMKSHAL*ELQRYS
Trigger: AGAATAACGTTGCAGTTCCCACAGGGCATGTGACTT...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACAAGTCACATGCCCTGTaGGAACTGCAACGTTATTCT +
Preference number: 4 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNKSHAL*ELQRYS
Trigger: AGAATAACGTTGCAGTTCCCACAGGGCATGTGACTT...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACAAGTCACATGCCCTGTaGGAACTGCAACGTTATTCT +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHKSHAL*ELQRYS
Trigger: AGAATAACGTTGCAGTTCCCACAGGGCATGTGACTT...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR TCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGATTGTCTTCTCACCATaGGAAACAGTAAGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMIVFSP*ETVRVA
Trigger: AGCGACTCTTACTGTTTCTCATGGTGAGAAGACAAT...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396934.7
ENST00000508906.6
CDS-3UTR GCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGCAGAAAACTGAGCTCTaGCAAAAATGTCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMQKTEL*QKCLSL
Trigger: CAAGGACAGACATTTTTGGCAGAGCTCAGTTTTCTG...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508906.6
CDS-3UTR CCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGGAAAACCATCCCTTaGTATTCCCATTGGAGAATC +
Preference number: 4 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNWKTIP*YSHWRI
Trigger: GATTCTCCAATGGGAATACCAAGGGATGGTTTTCCA...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000508906.6
CDS-3UTR CCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACGGCATTTGCCATGTCTaGATACAGAATTACATCTGC +
Preference number: 4 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNGICHV*IQNYIC
Trigger: GCAGATGTAATTCTGTATCCAGACATGGCAAATGCC...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACAGAAAACTGAGCCCTTaGTATTCCCATTGGAGAATC +
Preference number: 4 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNRKLSP*YSHWRI
Trigger: GATTCTCCAATGGGAATACCAAGGGCTCAGTTTTCT...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396934.7
CDS-3UTR CCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACCACTTTCTATCTCACTaGACAGAGCAGTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHHFLSH*TEQLFP
Trigger: AGGAAATAACTGCTCTGTCCAGTGAGATAGAAAGTG...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGCACTTTCTATCTCACTaGACAGAGCAGTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMHFLSH*TEQLFP
Trigger: AGGAAATAACTGCTCTGTCCAGTGAGATAGAAAGTG...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR GCA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACTTTTCATCTATGCTCTaGCAAAAATGTCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHFSSML*QKCLSL
Trigger: CAAGGACAGACATTTTTGGCAGAGCATAGATGAAAA...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356386.6
ENST00000377708.7
CDS-3UTR GCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGTTTTCATCTATGCTCTaGCAAAAATGTCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMFSSML*QKCLSL
Trigger: CAAGGACAGACATTTTTGGCAGAGCATAGATGAAAA...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356386.6
ENST00000377708.7
CDS-3UTR GCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGTGCCATTTTCATCTATaGTCTGCCAAAAATGTCTGT +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMCHFHL*SAKNVC
Trigger: ACAGACATTTTTGGCAGAGCATAGATGAAAATGGCA...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356386.6
ENST00000377708.7
CDS-3UTR GCA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGTTCACTATTCCTGTCTaGTTTGTAAAGTCAATACAC +
Preference number: 4 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMFTIPV*FVKSIH
Trigger: GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAA...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR GCA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTTCACTATTCCTGTCTaGTTTGTAAAGTCAATACAC +
Preference number: 4 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNFTIPV*FVKSIH
Trigger: GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAA...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
3UTR CAA 72 bp TTAATGTTAGTCATTGTTGTTCAGATCCCAGCTCTGTaGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATA +
Preference number: 4 (lower is better)
Translates to: LMLVIVVQIPAL*FTIPVCFVKSI
Trigger: TATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTGAACAACAATGACTAACATTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CAA 90 bp ACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCATGCCACTGGGCTCCCTaGTCCTCTGGTTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: TGLPCPLVCCCVWPMGGPCHWAP*SSGLLL
Trigger: CAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCA...TGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CAA 90 bp CAGCTTTCTCCACCCTCTTCTGGACCCCAGGAATCTGTCCTCTATGGACAGTGCTGCCACTGGGCTCCCTaGTCCTCTGGTTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QLSPPSSGPQESVLYGQCCHWAP*SSGLLL
Trigger: CAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCA...GCACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAGAGGGTGGAGAAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CAA 90 bp GCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCAGGCTTCCCTTGGTATTCCCATaGGAGAATCAGAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: APLSSGLLLCLANGRPRLPLVFP*ENQSPQ
Trigger: CTGTGGGCTCTGATTCTCCAATGGGAATACCAAGGG...AAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CAA 90 bp CTCCACCCTCTTCTGGACCCCAGGAATCTGTCCTCTATGGACAGTGCCACTGGGCATCAGGCTGACTTATaGGTATCGGACGAAGACTCC +
Preference number: 5 (lower is better)
Translates to: LHPLLDPRNLSSMDSATGHQADL*VSDEDS
Trigger: GGAGTCTTCGTCCGATACCAATAAGTCAGCCTGATG...CCCAGTGGCACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAGAGGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS CCA 90 bp GGAATCTGTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTaGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCTGATAGAAGAT +
Preference number: 5 (lower is better)
Translates to: GICPLWTVPLGSLVL*FAAVFGQWEALIED
Trigger: ATCTTCTATCAGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAGATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604202.1
CDS-3UTR CAA 90 bp CTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTGCCCTTGGTATTCCCATaGGAGAATCAGAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: LYGQCHWAPLSSGLLLCLPLVFP*ENQSPQ
Trigger: CTGTGGGCTCTGATTCTCCAATGGGAATACCAAGGG...CAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CAA 90 bp TCAGCTTTCTCCACCCTCTTCTGGACCCCAGGAATCTGTCCTCTATGGACAGTGATGGGAGGCCCAGGCTaGAAGAGGGCCATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: SAFSTLFWTPGICPLWTVMGGPG*KRAIFP
Trigger: TGGAAAAATGGCCCTCTTCAAGCCTGGGCCTCCCAT...CACTGTCCATAGAGGACAGATTCCTGGGGTCCAGAAGAGGGTGGAGAAAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS GCA 90 bp TCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTaGTGTGTTTGGCCAATGGGAGGCCCTGATAGAAGATTAGAAGGA +
Preference number: 5 (lower is better)
Translates to: SSMDSATGLPCPLVC*CVWPMGGPDRRLEG
Trigger: TCCTTCTAATCTTCTATCAGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604202.1
CDS GCA 90 bp CTGTCCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTaGTGCTGTGTTTGGCCAATGGGAGGCCCTGATAGAAGATTAGAA +
Preference number: 5 (lower is better)
Translates to: LSSMDSATGLPCPLV*CCVWPMGGPDRRLE
Trigger: TTCTAATCTTCTATCAGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604202.1
CDS-3UTR CAA 90 bp CCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTCATCAGGCTGACTTATaGGTATCGGACGAAGACTCC +
Preference number: 5 (lower is better)
Translates to: PLWTVPLGSLVLWFAAVFHQADL*VSDEDS
Trigger: GGAGTCTTCGTCCGATACCAATAAGTCAGCCTGATG...AAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CAA 90 bp GGCCTTATATGCCCTAGATTCACTCTCCAGCCTTCAGCTTTCTCCACCCTCTTCATGGGAGGCCCAGGCTaGAAGAGGGCCATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: GLICPRFTLQPSAFSTLFMGGPG*KRAIFP
Trigger: TGGAAAAATGGCCCTCTTCAAGCCTGGGCCTCCCAT...GAAGAGGGTGGAGAAAGCTGAAGGCTGGAGAGTGAATCTAGGGCATATAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS-3UTR CAA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGCCCTTGGTATTCCCATaGGAGAATCAGAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTPLVFP*ENQSPQ
Trigger: CTGTGGGCTCTGATTCTCCAATGGGAATACCAAGGG...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CAA 90 bp TGGGCTCTGTGTGGGGCCTTATATGCCCTAGATTCACTCTCCAGCCTTCAGCTTATGGAAAACCATCCCTaGGTATTCCCATTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: WALCGALYALDSLSSLQLMENHP*VFPLEN
Trigger: ATTCTCCAATGGGAATACCAAGGGATGGTTTTCCAT...AAGCTGAAGGCTGGAGAGTGAATCTAGGGCATATAAGGCCCCACACAGAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396948.5
CDS-3UTR CAA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACGGTTCTGACTGGCTGTaGTGGAGGGTGAGACCCTTA +
Preference number: 5 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNGSDWL*WRVRPL
Trigger: TAAGGGTCTCACCCTCCACAACAGCCAGTCAGAACC...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CAA 90 bp GTGAGGATTAAAGGAGTGACACCCACCAAAGCTCATAACACAGCACTCAGAACGGTAAGCTACTTAATGTaGCCCTGCCTCTGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: VRIKGVTPTKAHNTALRTVSYLM*PCLCFH
Trigger: ATGGAAGCAGAGGCAGGGCAACATTAAGTAGCTTAC...CGTTCTGAGTGCTGTGTTATGAGCTTTGGTGGGTGTCACTCCTTTAATCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CAA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACCCCTTGGTATTCCCATaGGAGAATCAGAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHPLVFP*ENQSPQ
Trigger: CTGTGGGCTCTGATTCTCCAATGGGAATACCAAGGG...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CAA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACCCCTTGGTATTCCCATaGGAGAATCAGAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNPLVFP*ENQSPQ
Trigger: CTGTGGGCTCTGATTCTCCAATGGGAATACCAAGGG...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CAA 90 bp CAGATCCCAGCTCTGTTGTTCACTATTCCTGTCTGCTTTGTAAAGTCAATACACCATCAGGCTGACTTATaGGTATCGGACGAAGACTCC +
Preference number: 5 (lower is better)
Translates to: QIPALLFTIPVCFVKSIHHQADL*VSDEDS
Trigger: GGAGTCTTCGTCCGATACCAATAAGTCAGCCTGATG...GTGTATTGACTTTACAAAGCAGACAGGAATAGTGAACAACAGAGCTGGGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CAA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGCATCAGGCTGACTTATaGGTATCGGACGAAGACTCC +
Preference number: 5 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMHQADL*VSDEDS
Trigger: GGAGTCTTCGTCCGATACCAATAAGTCAGCCTGATG...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CAA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACCATCAGGCTGACTTATaGGTATCGGACGAAGACTCC +
Preference number: 5 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNHQADL*VSDEDS
Trigger: GGAGTCTTCGTCCGATACCAATAAGTCAGCCTGATG...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CAA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACGTAAGCTACTTAATGTaGCCCTGCCTCTGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNVSYLM*PCLCFH
Trigger: ATGGAAGCAGAGGCAGGGCAACATTAAGTAGCTTAC...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000508906.6
CDS-3UTR CAA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGCAGAAAACTGAGCCCTaGGTATTCCCATTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMQKTEP*VFPLEN
Trigger: ATTCTCCAATGGGAATACCAAGGGCTCAGTTTTCTG...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396934.7
CDS-3UTR CAA 90 bp TATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACTGTCCTATGATGGAAAACCATCCCTaGGTATTCCCATTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: YLYKGANKVAPNSNNCPMMENHP*VFPLEN
Trigger: ATTCTCCAATGGGAATACCAAGGGATGGTTTTCCAT...CATAGGACAGTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000508906.6
CDS-3UTR CAA 90 bp CAGTTTCCTTATCTGTATAAAGGGGCCAATAAGGTGGCACCAAACTCAAACAACATGGAAAACCATCCCTaGGTATTCCCATTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: QFPYLYKGANKVAPNSNNMENHP*VFPLEN
Trigger: ATTCTCCAATGGGAATACCAAGGGATGGTTTTCCAT...GTTGTTTGAGTTTGGTGCCACCTTATTGGCCCCTTTATACAGATAAGGAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000508906.6
CDS CCA 72 bp CCTCTATGGACAGTGCCACTGGGCTCCCTTGTCCTCTaGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: PLWTVPLGSLVL*FAAVFGQWEAL
Trigger: CAGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCCATAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604202.1
CDS GCA 72 bp GACAGTGCCACTGGGCTCCCTTGTCCTCTGGTTTGCTaGTGTGTTTGGCCAATGGGAGGCCCTGATAGAAGA +
Preference number: 6 (lower is better)
Translates to: DSATGLPCPLVC*CVWPMGGPDRR
Trigger: TCTTCTATCAGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604202.1
CDS CCA 72 bp ACTGGGCTCCCTTGTCCTCTGGTTTGCTGCTGTGTTTaGCCAATGGGAGGCCCTGATAGAAGATTAGAAGGA +
Preference number: 6 (lower is better)
Translates to: TGLPCPLVCCCV*PMGGPDRRLEG
Trigger: TCCTTCTAATCTTCTATCAGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACAAGGGAGCCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604202.1
CDS CAA 72 bp GTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCAGGCTaGAAGAGGGCCATTTTTCCATTAGAGCATCAGGCT +
Preference number: 6 (lower is better)
Translates to: VCCCVWPMGGPG*KRAIFPLEHQA
Trigger: AGCCTGATGCTCTAATGGAAAAATGGCCCTCTTCAAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS CAA 90 bp TGTCCTCTGGTTTGCTGCTGTGTTTGGCCAATGGGAGGCCCAGGCTaGAAGAGGGCCATTTTTCCATTAGAGCATCAGGCTGACTTATTG +
Preference number: 6 (lower is better)
Translates to: CPLVCCCVWPMGGPG*KRAIFPLEHQADLL
Trigger: CAATAAGTCAGCCTGATGCTCTAATGGAAAAATGGCCCTCTTCAAGCCTGGGCCTCCCATTGGCCAAACACAGCAGCAAACCAGAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396948.5
ENST00000527422.5
CDS CAA 72 bp CCACTGTTGGGAACCATGGGGGCACTGCACTTTTCCTaGTTGCTTTCCCTTAACCCTTCTTTCTGGAAACCT +
Preference number: 6 (lower is better)
Translates to: PLLGTMGALHFS*LLSLNPSFWKP
Trigger: AGGTTTCCAGAAAGAAGGGTTAAGGGAAAGCAACAAGGAAAAGTGCAGTGCCCCCATGGTTCCCAACAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604202.1
CDS TCA 72 bp CTTGAAGAGGGCCATTTTTCCATTAGAGCATCAGGCTaGCTTATTGGTATCGGACGAAGACTCCTCTCCACG +
Preference number: 6 (lower is better)
Translates to: LEEGHFSIRASG*LIGIGRRLLST
Trigger: CGTGGAGAGGAGTCTTCGTCCGATACCAATAAGTCAGCCTGATGCTCTAATGGAAAAATGGCCCTCTTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356386.6
ENST00000377708.7
ENST00000396934.7
ENST00000396948.5
ENST00000508906.6
ENST00000527422.5
ENST00000532294.1
CDS GCA 72 bp TGTTGGGAACCATGGGGGCACTGCACTTTTCCTTGTTaGTTTCCCTTAACCCTTCTTTCTGGAAACCTTGTC +
Preference number: 6 (lower is better)
Translates to: CWEPWGHCTFPC*FPLTLLSGNLV
Trigger: GACAAGGTTTCCAGAAAGAAGGGTTAAGGGAAAGCAACAAGGAAAAGTGCAGTGCCCCCATGGTTCCCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604202.1
CDS TCA 72 bp CAGAAAAGCGGAGGTGAACCCCCACCACACAGAAATTaGGTCTTTAGATTAGATCTAATTAATCCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: QKSGGEPPPHRN*VFRLDLINPAE
Trigger: CTCAGCTGGATTAATTAGATCTAATCTAAAGACTCAATTTCTGTGTGGTGGGGGTTCACCTCCGCTTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604202.1