Pregenerated sensors for BTN3A1 (Homo sapiens)
Ensembl gene IDs: ENSG00000026950Ensembl transcript IDs: ENST00000082468.11, ENST00000289361.11, ENST00000414912.2, ENST00000425234.6, ENST00000427334.5, ENST00000476549.6, ENST00000502361.1, ENST00000513047.5
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGGTGGCGTGCACCTATATTCCCAGTACTCGGGAGGCTGAGGCAGGAGAATTGTTGTGATTGGTTGCTGTaGAGGGGGAGGCCCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: WWRAPIFPVLGRLRQENCCDWLL*RGRPSA Trigger: AGCTGAGGGCCTCCCCCTCCACAGCAACCAATCACA...ACAATTCTCCTGCCTCAGCCTCCCGAGTACTGGGAATATAGGTGCACGCCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| 3UTR-3UTR GCA 90 bp | CGGGGACTGAAGCTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTATGGTTGTGATTGGTTaGTGTGGAGGGGGAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: RGLKLNISQLQKLLHELCMVVIG*CGGGGP Trigger: AGGGCCTCCCCCTCCACAGCAACCAATCACAACCAT...ACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAGCTTCAGTCCCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| 3UTR-3UTR CCA 90 bp | CGGGGACTGAAGCTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTCTTTATGGTTGTGATTaGTTGCTGTGGAGGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: RGLKLNISQLQKLLHELCLYGCD*LLWRGR Trigger: CCTCCCCCTCCACAGCAACCAATCACAACCATAAAG...ACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAGCTTCAGTCCCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| 3UTR-3UTR CCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGTGTGATTGGTTGCTGTaGAGGGGGAGGCCCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LLCSQFTFLHPSFLICIRCDWLL*RGRPSA Trigger: AGCTGAGGGCCTCCCCCTCCACAGCAACCAATCACA...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
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| 3UTR-3UTR GCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGATGGTTGTGATTGGTTaGTGTGGAGGGGGAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LLCSQFTFLHPSFLICIRMVVIG*CGGGGP Trigger: AGGGCCTCCCCCTCCACAGCAACCAATCACAACCAT...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
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| 3UTR CAA 90 bp | GAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACTaGCTAAATGAGACTACCCGACAGGGTGTTGCGAGGATTAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: ELCKLLNVALPQLPY*LNETTRQGVARIKG Trigger: TCCTTTAATCCTCGCAACACCCTGTCGGGTAGTCTCATTTAGCAAGTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| 3UTR-3UTR TCA 90 bp | TGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACTTGCTAAATGAGACTGGTGTCTCTAGGGAATaGTCAGCACTCGGTCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: CKLLNVALPQLPYLLNETGVSRE*SALGQN Trigger: ATTCTGACCGAGTGCTGATCATTCCCTAGAGACACC...AGTCTCATTTAGCAAGTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| 3UTR-3UTR TCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGGGTGTCTCTAGGGAATaGTCAGCACTCGGTCAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: LLCSQFTFLHPSFLICIRGVSRE*SALGQN Trigger: ATTCTGACCGAGTGCTGATCATTCCCTAGAGACACC...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
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| 3UTR-3UTR CCA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACGCACTCGGTCAGAATTaGAGGAACTCTCTTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LLHELCKLLNVALPQLPYALGQN*RNSLLL Trigger: AAGAAGAAGAGAGTTCCTCCAATTCTGACCGAGTGC...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| 3UTR CAA 90 bp | CTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTAAGTaGCTTAATGTTGCCCTGCCTCAACTTCCATACTTGCTAAATGAG | + |
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Preference number: 2 (lower is better) Translates to: LNISQLQKLLHELCK*LNVALPQLPYLLNE Trigger: CTCATTTAGCAAGTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| 3UTR-3UTR CCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGGCACTCGGTCAGAATTaGAGGAACTCTCTTCTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LLCSQFTFLHPSFLICIRALGQN*RNSLLL Trigger: AAGAAGAAGAGAGTTCCTCCAATTCTGACCGAGTGC...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
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| 3UTR-3UTR CCA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACAAGGGGAAAATAAGATaGTACCAAACTCAAACAACT | + |
|
Preference number: 2 (lower is better) Translates to: LLHELCKLLNVALPQLPYKGKIR*YQTQTT Trigger: AGTTGTTTGAGTTTGGTACCATCTTATTTTCCCCTT...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| 3UTR-3UTR CAA 90 bp | TGGTGGCGTGCACCTATATTCCCAGTACTCGGGAGGCTGAGGCAGGAGAATTGTGTAAGTTGCTTAATGTaGCCCTGCCTCAACTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: WWRAPIFPVLGRLRQENCVSCLM*PCLNFH Trigger: ATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTAC...ACAATTCTCCTGCCTCAGCCTCCCGAGTACTGGGAATATAGGTGCACGCCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| 3UTR-3UTR CAA 90 bp | TGGTGGCGTGCACCTATATTCCCAGTACTCGGGAGGCTGAGGCAGGAGAATTGTCATGAGTTATGTAAGTaGCTTAATGTTGCCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: WWRAPIFPVLGRLRQENCHELCK*LNVALP Trigger: AGGCAGGGCAACATTAAGCAACTTACATAACTCATG...ACAATTCTCCTGCCTCAGCCTCCCGAGTACTGGGAATATAGGTGCACGCCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| 3UTR-3UTR CAA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACTATGGTTGTGATTGGTaGCTGTGGAGGGGGAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLHELCKLLNVALPQLPYYGCDW*LWRGRP Trigger: GGGCCTCCCCCTCCACAGCAACCAATCACAACCATA...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| 3UTR-3UTR CAA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGTATGGTTGTGATTGGTaGCTGTGGAGGGGGAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLCSQFTFLHPSFLICIRYGCDW*LWRGRP Trigger: GGGCCTCCCCCTCCACAGCAACCAATCACAACCATA...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
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| 3UTR GCA 72 bp | CCCAACTGCAGAAATTACTGCATGAGTTATGTAAGTTaGTTAATGTTGCCCTGCCTCAACTTCCATACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PNCRNYCMSYVS*LMLPCLNFHTC Trigger: GCAAGTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAATTTCTGCAGTTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR TCA 90 bp | GAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTGAAAGGCCTGGGCCATGCTaGGGAGGTCTGAGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EKAPGIRYLVSRGEEEGERPGPC*GGLSPK Trigger: CTTTGGACTCAGACCTCCTCAGCATGGCCCAGGCCT...TTCACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476549.6 |
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| CDS-3UTR TCA 90 bp | GAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTGAAAGGGGAAGAGGAGGGTaGAATGAGGGTTGCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: EKAPGIRYLVSRGEEEGERGRGG*NEGCLS Trigger: GCTGAGGCAACCCTCATTTCACCCTCCTCTTCCCCT...TTCACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000476549.6 |
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| CDS-3UTR TCA 90 bp | GAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTGAACATGCTGAGGAGGTCTaGGTCCAAAGCCTGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: EKAPGIRYLVSRGEEEGEHAEEV*VQSLVS Trigger: GGACACCAGGCTTTGGACTCAGACCTCCTCAGCATG...TTCACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476549.6 |
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| CDS-3UTR CCA 90 bp | TGGTGGCGTGCACCTATATTCCCAGTACTCGGGAGGCTGAGGCAGGAGAATTGTACCAATGAGCAGGGGTaGATAGACCCCTCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WWRAPIFPVLGRLRQENCTNEQG*IDPSPG Trigger: TCCAGGAGAGGGGTCTATCCACCCCTGCTCATTGGT...ACAATTCTCCTGCCTCAGCCTCCCGAGTACTGGGAATATAGGTGCACGCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR TCA 90 bp | GGAGAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTAAGTGGAGCCTCATCTaGAGCATTTCCTCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GEKAPGIRYLVSRGEEEGKWSLI*SISSPG Trigger: GCCTGGTGAGGAAATGCTTCAGATGAGGCTCCACTT...ACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476549.6 |
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| CDS-3UTR GCA 90 bp | TGGTGGCGTGCACCTATATTCCCAGTACTCGGGAGGCTGAGGCAGGAGAATTGTCTGCACACCCCTATATaGCACTCTTTCCTGTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: WWRAPIFPVLGRLRQENCLHTPI*HSFLSP Trigger: AGGGGACAGGAAAGAGTGGCATATAGGGGTGTGCAG...ACAATTCTCCTGCCTCAGCCTCCCGAGTACTGGGAATATAGGTGCACGCCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR TCA 90 bp | GAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTGAAGAGCTGAGTGAGGCATaGGCAGCTGAAGCAAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: EKAPGIRYLVSRGEEEGEELSEA*AAEAKG Trigger: TCCTTTTGCTTCAGCTGCTCATGCCTCACTCAGCTC...TTCACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000476549.6 |
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| CDS-3UTR GCA 90 bp | GGAGAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTCTGGTGTCCCTAGTCTaGCCTAAATGTGACTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: GEKAPGIRYLVSRGEEEGLVSLV*PKCDSL Trigger: GAGAGAGTCACATTTAGGGCAGACTAGGGACACCAG...ACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476549.6 |
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| CDS-3UTR TCA 90 bp | GAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTGAAGGATACTTCTCCATCTaGGTTCCTCCAGGAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: EKAPGIRYLVSRGEEEGEGYFSI*VPPGAS Trigger: TGAAGCTCCTGGAGGAACTCAGATGGAGAAGTATCC...TTCACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476549.6 |
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| CDS-3UTR GCA 90 bp | GGAGAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTTCTCTCTCCCCGAGATaGATACTGGATACTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GEKAPGIRYLVSRGEEEGSLSPR*ILDTSP Trigger: TGGAGAAGTATCCAGTATGCATCTCGGGGAGAGAGA...ACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000476549.6 |
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| CDS-3UTR TCA 90 bp | GAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTGAACCATTCATTATAGGCTaGATGTCTCTCTCCCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: EKAPGIRYLVSRGEEEGEPFIIG*MSLSPR Trigger: TCTCGGGGAGAGAGACATTCAGCCTATAATGAATGG...TTCACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000476549.6 |
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| CDS-3UTR GCA 90 bp | GGAGAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTCTTGTGCTTTGTTCTTaGTTCATTGTGCTCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: GEKAPGIRYLVSRGEEEGLVLCS*FIVLHA Trigger: GGCATGGAGCACAATGAAGCAAGAACAAAGCACAAG...ACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476549.6 |
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| CDS-3UTR CCA 90 bp | CGGGGACTGAAGCTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTAAGCCGGTCACCCGGTaGCTCAAGCCTGTAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: RGLKLNISQLQKLLHELCKPVTR*LKPVIP Trigger: TGGGATTACAGGCTTGAGCCACCGGGTGACCGGCTT...ACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAGCTTCAGTCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR CCA 90 bp | GAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTGAACCCCGAGATGCATACTaGATACTTCTCCATCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: EKAPGIRYLVSRGEEEGEPRDAY*ILLHLS Trigger: ACTCAGATGGAGAAGTATCCAGTATGCATCTCGGGG...TTCACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000476549.6 |
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| CDS-3UTR GCA 90 bp | GAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTGAAGAAGGCCAGGAAACTTaGCATTTTCATTCATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: EKAPGIRYLVSRGEEEGEEGQET*HFHSCC Trigger: GCAGCATGAATGAAAATGGCAAGTTTCCTGGCCTTC...TTCACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000476549.6 |
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| CDS-3UTR CCA 90 bp | TGGTGGCGTGCACCTATATTCCCAGTACTCGGGAGGCTGAGGCAGGAGAATTGTAAAATTTGTTGGGTGTaGTGGCGTGCACCTATATTC | + |
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Preference number: 4 (lower is better) Translates to: WWRAPIFPVLGRLRQENCKICWV*WRAPIF Trigger: GAATATAGGTGCACGCCACCACACCCAACAAATTTT...ACAATTCTCCTGCCTCAGCCTCCCGAGTACTGGGAATATAGGTGCACGCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR GCA 90 bp | TGGTGGCGTGCACCTATATTCCCAGTACTCGGGAGGCTGAGGCAGGAGAATTGTGTCAATTCACTTTTCTaGACCCCAGTTTCCTTATCT | + |
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Preference number: 4 (lower is better) Translates to: WWRAPIFPVLGRLRQENCVNSLF*TPVSLS Trigger: AGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGAC...ACAATTCTCCTGCCTCAGCCTCCCGAGTACTGGGAATATAGGTGCACGCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| 3UTR CAA 72 bp | AAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACTaGCTAAATGAGACTACCCGACAGGGTGTTGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: KLLNVALPQLPY*LNETTRQGVAR Trigger: CCTCGCAACACCCTGTCGGGTAGTCTCATTTAGCAAGTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR TCA 90 bp | CGGGGACTGAAGCTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTTCACATCCGCAGGCTTaGAGAGGGCCTTTTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: RGLKLNISQLQKLLHELCSHPQA*RGPFSI Trigger: AATGGAAAAAGGCCCTCTTCAAGCCTGCGGATGTGA...ACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAGCTTCAGTCCCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR GCA 90 bp | CGGGGACTGAAGCTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTTTGGGTGTGGTGGCGTaGACCTATATTCCCAGTACT | + |
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Preference number: 4 (lower is better) Translates to: RGLKLNISQLQKLLHELCLGVVA*TYIPST Trigger: AGTACTGGGAATATAGGTGCACGCCACCACACCCAA...ACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAGCTTCAGTCCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR TCA 90 bp | TGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACTTGCTAAATGAGACTGGCAGACACGAAAGTTaGGCAGAAGGAAGGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: CKLLNVALPQLPYLLNETGRHES*AEGRPG Trigger: TCCTGGCCTTCCTTCTGCTCAACTTTCGTGTCTGCC...AGTCTCATTTAGCAAGTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR TCA 90 bp | CGGGGACTGAAGCTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTCCATTCATTATAGGCTaGATGTCTCTCTCCCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: RGLKLNISQLQKLLHELCPFIIG*MSLSPR Trigger: TCTCGGGGAGAGAGACATTCAGCCTATAATGAATGG...ACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAGCTTCAGTCCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR CCA 90 bp | TGGTGGCGTGCACCTATATTCCCAGTACTCGGGAGGCTGAGGCAGGAGAATTGTCCATTCTTTCTACTATaGTTAAATCTCCTTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: WWRAPIFPVLGRLRQENCPFFLL*LNLLLE Trigger: TTCCAGAAGGAGATTTAACCATAGTAGAAAGAATGG...ACAATTCTCCTGCCTCAGCCTCCCGAGTACTGGGAATATAGGTGCACGCCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR TCA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACGAGCTGAGTGAGGCATaGGCAGCTGAAGCAAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LLHELCKLLNVALPQLPYELSEA*AAEAKG Trigger: TCCTTTTGCTTCAGCTGCTCATGCCTCACTCAGCTC...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR CCA 90 bp | GAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTGAACCATTCTTTCTACTATaGTTAAATCTCCTTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: EKAPGIRYLVSRGEEEGEPFFLL*LNLLLE Trigger: TTCCAGAAGGAGATTTAACCATAGTAGAAAGAATGG...TTCACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476549.6 |
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| CDS-3UTR CCA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACGGTGGGTTCTTCCTATaGGGGAAGAAACAGGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLHELCKLLNVALPQLPYGGFFL*GKKQGG Trigger: TCCACCCTGTTTCTTCCCCCATAGGAAGAACCCACC...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR CCA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACGCTCTGACAATCAGCTaGGAAGGAGTCAACAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LLHELCKLLNVALPQLPYALTIS*EGVNRG Trigger: ACCCCTGTTGACTCCTTCCCAGCTGATTGTCAGAGC...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR TCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGGAGCTGAGTGAGGCATaGGCAGCTGAAGCAAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRELSEA*AAEAKG Trigger: TCCTTTTGCTTCAGCTGCTCATGCCTCACTCAGCTC...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
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| CDS-3UTR TCA 90 bp | TGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACTTGCTAAATGAGACTCACAACCACCTACAGTaGTCCTTATCCTGGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: CKLLNVALPQLPYLLNETHNHLQ*SLSWSH Trigger: ATGGCTCCAGGATAAGGATCACTGTAGGTGGTTGTG...AGTCTCATTTAGCAAGTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR GCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGCTGCACACCCCTATATaGCACTCTTTCCTGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRLHTPI*HSFLSP Trigger: AGGGGACAGGAAAGAGTGGCATATAGGGGTGTGCAG...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR CCA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACCTTTATGGTTGTGATTaGTTGCTGTGGAGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLHELCKLLNVALPQLPYLYGCD*LLWRGR Trigger: CCTCCCCCTCCACAGCAACCAATCACAACCATAAAG...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR CCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGGGGGAAGAAACAGGGTaGAAAAGAACGGCCATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRGEETG*KRTAIG Trigger: CCCTATGGCCGTTCTTTTCCACCCTGTTTCTTCCCC...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR TCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGTCACATCCGCAGGCTTaGAGAGGGCCTTTTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRSHPQA*RGPFSI Trigger: AATGGAAAAAGGCCCTCTTCAAGCCTGCGGATGTGA...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR TCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGGGATACTTCTCCATCTaGGTTCCTCCAGGAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRGYFSI*VPPGAS Trigger: TGAAGCTCCTGGAGGAACTCAGATGGAGAAGTATCC...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR GCA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACTCTCTCTCCCCGAGATaGATACTGGATACTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLHELCKLLNVALPQLPYSLSPR*ILDTSP Trigger: TGGAGAAGTATCCAGTATGCATCTCGGGGAGAGAGA...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR GCA 90 bp | CGGGGACTGAAGCTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTATGAGTTATGTAAGTTaGTTAATGTTGCCCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGLKLNISQLQKLLHELCMSYVS*LMLPCL Trigger: GAGGCAGGGCAACATTAAGCAACTTACATAACTCAT...ACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAGCTTCAGTCCCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR CCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGCTTTATGGTTGTGATTaGTTGCTGTGGAGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRLYGCD*LLWRGR Trigger: CCTCCCCCTCCACAGCAACCAATCACAACCATAAAG...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR CCA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACCCCCGAGATGCATACTaGATACTTCTCCATCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLHELCKLLNVALPQLPYPRDAY*ILLHLS Trigger: ACTCAGATGGAGAAGTATCCAGTATGCATCTCGGGG...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR TCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGCCATTCATTATAGGCTaGATGTCTCTCTCCCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRPFIIG*MSLSPR Trigger: TCTCGGGGAGAGAGACATTCAGCCTATAATGAATGG...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR GCA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACGAAGGCCAGGAAACTTaGCATTTTCATTCATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLHELCKLLNVALPQLPYEGQET*HFHSCC Trigger: GCAGCATGAATGAAAATGGCAAGTTTCCTGGCCTTC...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR GCA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACCTTGTGCTTTGTTCTTaGTTCATTGTGCTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLHELCKLLNVALPQLPYLVLCS*FIVLHA Trigger: GGCATGGAGCACAATGAAGCAAGAACAAAGCACAAG...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR GCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGTCTCTCTCCCCGAGATaGATACTGGATACTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRSLSPR*ILDTSP Trigger: TGGAGAAGTATCCAGTATGCATCTCGGGGAGAGAGA...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR CCA 90 bp | TGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACTTGCTAAATGAGACTAGTACAAAAATTTGTTaGGTGTGGTGGCGTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CKLLNVALPQLPYLLNETSTKIC*VWWRAP Trigger: AGGTGCACGCCACCACACCCAACAAATTTTTGTACT...AGTCTCATTTAGCAAGTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR CCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGCCCCGAGATGCATACTaGATACTTCTCCATCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRPRDAY*ILLHLS Trigger: ACTCAGATGGAGAAGTATCCAGTATGCATCTCGGGG...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| 3UTR CAA 72 bp | TCCCAACTGCAGAAATTACTGCATGAGTTATGTAAGTaGCTTAATGTTGCCCTGCCTCAACTTCCATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLQKLLHELCK*LNVALPQLPYL Trigger: CAAGTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAATTTCTGCAGTTGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR TCA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACCAGTGTCTTCACCTTTaGGTCCCAACATTGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LLHELCKLLNVALPQLPYQCLHL*VPTLKI Trigger: GATTTTCAATGTTGGGACTCAAAGGTGAAGACACTG...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR TCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGACGTCCAGGAAAGTATaGATATGCGATCCATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRTSRKV*ICDPST Trigger: TGTGGATGGATCGCATATTCATACTTTCCTGGACGT...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR GCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGGAAGGCCAGGAAACTTaGCATTTTCATTCATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIREGQET*HFHSCC Trigger: GCAGCATGAATGAAAATGGCAAGTTTCCTGGCCTTC...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR GCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGCTTGTGCTTTGTTCTTaGTTCATTGTGCTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRLVLCS*FIVLHA Trigger: GGCATGGAGCACAATGAAGCAAGAACAAAGCACAAG...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR GCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGTCTGCACATTCTTACTaGACACCCCTATATGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRSAHSY*TPLYAT Trigger: AGTGGCATATAGGGGTGTGCAGTAAGAATGTGCAGA...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR CCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGTTCTTCTTTTCACGCTaGACAAATAGTCAGGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRFFFSR*TNSQGR Trigger: ACGGCCCTGACTATTTGTCCAGCGTGAAAAGAAGAA...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR CCA 90 bp | CGGGGACTGAAGCTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTAAGGGGAAAATAAGATaGTACCAAACTCAAACAACT | + |
|
Preference number: 4 (lower is better) Translates to: RGLKLNISQLQKLLHELCKGKIR*YQTQTT Trigger: AGTTGTTTGAGTTTGGTACCATCTTATTTTCCCCTT...ACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAGCTTCAGTCCCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR TCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGCAGTGTCTTCACCTTTaGGTCCCAACATTGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRQCLHL*VPTLKI Trigger: GATTTTCAATGTTGGGACTCAAAGGTGAAGACACTG...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR GCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGCTTCATTGTGCTCCATaGCATTTCTCTCAACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRLHCAP*HFSQLL Trigger: CAAGAGTTGAGAGAAATGGCATGGAGCACAATGAAG...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR TCA 90 bp | TGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACTTGCTAAATGAGACTTTTGAGTCCCAACATTaGAAATCACCTCTTAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: CKLLNVALPQLPYLLNETFESQH*KSPLSI Trigger: AATGCTAAGAGGTGATTTTCAATGTTGGGACTCAAA...AGTCTCATTTAGCAAGTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR GCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGGTCAATTCACTTTTCTaGACCCCAGTTTCCTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRVNSLF*TPVSLS Trigger: AGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGAC...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR TCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGTTTGAGTCCCAACATTaGAAATCACCTCTTAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRFESQH*KSPLSI Trigger: AATGCTAAGAGGTGATTTTCAATGTTGGGACTCAAA...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR GCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGCATTTTCATTCATGCTaGATATCAGGAGATACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRHFHSC*ISGDTG Trigger: TCCAGTATCTCCTGATATGCAGCATGAATGAAAATG...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR GCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGAACTGCAGAAATTACTaGATGAGTTATGTAAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRNCRNY*MSYVSC Trigger: GCAACTTACATAACTCATGCAGTAATTTCTGCAGTT...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR CCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGCCATTCTTTCTACTATaGTTAAATCTCCTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRPFFLL*LNLLLE Trigger: TTCCAGAAGGAGATTTAACCATAGTAGAAAGAATGG...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR CCA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGAAGGGGAAAATAAGATaGTACCAAACTCAAACAACT | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQFTFLHPSFLICIRKGKIR*YQTQTT Trigger: AGTTGTTTGAGTTTGGTACCATCTTATTTTCCCCTT...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS CCA 90 bp | TGCCCTAGATTCACTCTCCACCCTTCAGCTTTCTCCACCCTCTTCTaGGCCCCAGGAATCTGTCCTCTGGGCAGATTCCTGAGACAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CPRFTLHPSAFSTLF*APGICPLGRFLRQC Trigger: GCACTGTCTCAGGAATCTGCCCAGAGGACAGATTCCTGGGGCCCAGAAGAGGGTGGAGAAAGCTGAAGGGTGGAGAGTGAATCTAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425234.6 ENST00000502361.1 |
||
| CDS-3UTR CAA 90 bp | GAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTGAATTTTTCCTCCTGCTGTaGCCACAGGAAGTAACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: EKAPGIRYLVSRGEEEGEFFLLL*PQEVTG Trigger: GCCGGTTACTTCCTGTGGCAACAGCAGGAGGAAAAA...TTCACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000476549.6 |
||
| CDS-3UTR CAA 90 bp | TGGTGGCGTGCACCTATATTCCCAGTACTCGGGAGGCTGAGGCAGGAGAATTGTCCAGGAGCTTCACTCTaGTGCTTTGTTCTTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WWRAPIFPVLGRLRQENCPGASL*CFVLAS Trigger: TGAAGCAAGAACAAAGCACAAGAGTGAAGCTCCTGG...ACAATTCTCCTGCCTCAGCCTCCCGAGTACTGGGAATATAGGTGCACGCCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR CAA 90 bp | GGAGAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTCCAGGAGCTTCACTCTaGTGCTTTGTTCTTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GEKAPGIRYLVSRGEEEGPGASL*CFVLAS Trigger: TGAAGCAAGAACAAAGCACAAGAGTGAAGCTCCTGG...ACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476549.6 |
||
| CDS-3UTR CAA 90 bp | GGAGAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTTCTTGTGCTTTGTTCTaGCTTCATTGTGCTCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: GEKAPGIRYLVSRGEEEGSCALF*LHCAPC Trigger: GCATGGAGCACAATGAAGCAAGAACAAAGCACAAGA...ACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476549.6 |
||
| CDS-3UTR CAA 90 bp | CGGGGACTGAAGCTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTTATGGTTGTGATTGGTaGCTGTGGAGGGGGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGLKLNISQLQKLLHELCYGCDW*LWRGRP Trigger: GGGCCTCCCCCTCCACAGCAACCAATCACAACCATA...ACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAGCTTCAGTCCCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR CAA 90 bp | GGAGAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTTTTGTTCTTGCTTCATaGTGCTCCATGCCATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GEKAPGIRYLVSRGEEEGFVLAS*CSMPFL Trigger: GAGAAATGGCATGGAGCACAATGAAGCAAGAACAAA...ACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000476549.6 |
||
| CDS-3UTR CAA 90 bp | GGAGAGAAAGCCCCAGGTATCAGGTATCTTGTGTCCAGAGGGGAAGAGGAGGGTCTTCACTCTTGTGCTTaGTTCTTGCTTCATTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GEKAPGIRYLVSRGEEEGLHSCA*FLLHCA Trigger: AGCACAATGAAGCAAGAACAAAGCACAAGAGTGAAG...ACCCTCCTCTTCCCCTCTGGACACAAGATACCTGATACCTGGGGCTTTCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476549.6 |
||
| CDS-3UTR CAA 90 bp | CGGGGACTGAAGCTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTAGGCAGGAGAATTGTTaGAACCCAGGAGGTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RGLKLNISQLQKLLHELCRQENC*NPGGGG Trigger: ACCTCCACCTCCTGGGTTCAAACAATTCTCCTGCCT...ACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAGCTTCAGTCCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR CAA 90 bp | CGGGGACTGAAGCTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTAAGTACAAAAATTTGTaGGGTGTGGTGGCGTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RGLKLNISQLQKLLHELCKYKNL*GVVACT Trigger: GGTGCACGCCACCACACCCAACAAATTTTTGTACTT...ACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAGCTTCAGTCCCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR CAA 90 bp | TGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACTTGCTAAATGAGACTTTTTTCCTCCTGCTGTaGCCACAGGAAGTAACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: CKLLNVALPQLPYLLNETFFLLL*PQEVTG Trigger: GCCGGTTACTTCCTGTGGCAACAGCAGGAGGAAAAA...AGTCTCATTTAGCAAGTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR CAA 90 bp | CGGGGACTGAAGCTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTTCTTGTGCTTTGTTCTaGCTTCATTGTGCTCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: RGLKLNISQLQKLLHELCSCALF*LHCAPC Trigger: GCATGGAGCACAATGAAGCAAGAACAAAGCACAAGA...ACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAGCTTCAGTCCCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
||
| CDS-3UTR CAA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGTTTTTCCTCCTGCTGTaGCCACAGGAAGTAACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLCSQFTFLHPSFLICIRFFLLL*PQEVTG Trigger: GCCGGTTACTTCCTGTGGCAACAGCAGGAGGAAAAA...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
||
| CDS-3UTR CAA 90 bp | CGGGGACTGAAGCTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTCTTCACTCTTGTGCTTaGTTCTTGCTTCATTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGLKLNISQLQKLLHELCLHSCA*FLLHCA Trigger: AGCACAATGAAGCAAGAACAAAGCACAAGAGTGAAG...ACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAGCTTCAGTCCCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR CAA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACATCACATCCGCAGGCTaGAAGAGGGCCTTTTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LLHELCKLLNVALPQLPYITSAG*KRAFFH Trigger: ATGGAAAAAGGCCCTCTTCAAGCCTGCGGATGTGAT...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR CAA 90 bp | CGGGGACTGAAGCTGAACATCTCCCAACTGCAGAAATTACTGCATGAGTTATGTTCAGTGTCTTCACCTTaGAGTCCCAACATTGAAAAT | + |
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Preference number: 5 (lower is better) Translates to: RGLKLNISQLQKLLHELCSVSSP*SPNIEN Trigger: ATTTTCAATGTTGGGACTCAAAGGTGAAGACACTGA...ACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCAGCTTCAGTCCCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR CAA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGATCACATCCGCAGGCTaGAAGAGGGCCTTTTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LLCSQFTFLHPSFLICIRITSAG*KRAFFH Trigger: ATGGAAAAAGGCCCTCTTCAAGCCTGCGGATGTGAT...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
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| CDS-3UTR CAA 90 bp | TGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACTTGCTAAATGAGACTTTCTCAGGTGTCATTTaGACCCAGCCTTTTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: CKLLNVALPQLPYLLNETFSGVI*TQPFLC Trigger: GCAGAGAAAAGGCTGGGTCAAAATGACACCTGAGAA...AGTCTCATTTAGCAAGTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR CAA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGCCAGGAGCTTCACTCTaGTGCTTTGTTCTTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LLCSQFTFLHPSFLICIRPGASL*CFVLAS Trigger: TGAAGCAAGAACAAAGCACAAGAGTGAAGCTCCTGG...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
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| CDS-3UTR CAA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGTTCTCAGGTGTCATTTaGACCCAGCCTTTTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LLCSQFTFLHPSFLICIRFSGVI*TQPFLC Trigger: GCAGAGAAAAGGCTGGGTCAAAATGACACCTGAGAA...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
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| CDS-3UTR CAA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACGTAAGTTGCTTAATGTaGCCCTGCCTCAACTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LLHELCKLLNVALPQLPYVSCLM*PCLNFH Trigger: ATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTAC...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR CAA 90 bp | TGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACTTGCTAAATGAGACTTTTGTTCTTGCTTCATaGTGCTCCATGCCATTTCTC | + |
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Preference number: 5 (lower is better) Translates to: CKLLNVALPQLPYLLNETFVLAS*CSMPFL Trigger: GAGAAATGGCATGGAGCACAATGAAGCAAGAACAAA...AGTCTCATTTAGCAAGTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS-3UTR CAA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGTCTTGTGCTTTGTTCTaGCTTCATTGTGCTCCATGC | + |
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Preference number: 5 (lower is better) Translates to: LLCSQFTFLHPSFLICIRSCALF*LHCAPC Trigger: GCATGGAGCACAATGAAGCAAGAACAAAGCACAAGA...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
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| CDS-3UTR CAA 90 bp | TTACTGCATGAGTTATGTAAGTTGCTTAATGTTGCCCTGCCTCAACTTCCATACCATGAGTTATGTAAGTaGCTTAATGTTGCCCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: LLHELCKLLNVALPQLPYHELCK*LNVALP Trigger: AGGCAGGGCAACATTAAGCAACTTACATAACTCATG...GTATGGAAGTTGAGGCAGGGCAACATTAAGCAACTTACATAACTCATGCAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289361.11 |
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| CDS TCA 90 bp | TTTATTATTCCTTCAGTCTTCACCTCAACCCCCACAAACACAGATTaGAATCATCACCTAAATATGTGGAGGCCAAAGCTCAGAAGCATT | + |
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Preference number: 5 (lower is better) Translates to: FIIPSVFTSTPTNTD*NHHLNMWRPKLRSI Trigger: AATGCTTCTGAGCTTTGGCCTCCACATATTTAGGTGATGATTTCAATCTGTGTTTGTGGGGGTTGAGGTGAAGACTGAAGGAATAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000502361.1 |
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| CDS-3UTR CAA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGTTTGTTCTTGCTTCATaGTGCTCCATGCCATTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LLCSQFTFLHPSFLICIRFVLAS*CSMPFL Trigger: GAGAAATGGCATGGAGCACAATGAAGCAAGAACAAA...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
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| CDS-3UTR CAA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGCTTCACTCTTGTGCTTaGTTCTTGCTTCATTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: LLCSQFTFLHPSFLICIRLHSCA*FLLHCA Trigger: AGCACAATGAAGCAAGAACAAAGCACAAGAGTGAAG...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
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| CDS-3UTR CAA 90 bp | CTACTTTGTAGTCAATTCACTTTTCTGCACCCCAGTTTCCTTATCTGTATAAGGTCAGTGTCTTCACCTTaGAGTCCCAACATTGAAAAT | + |
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Preference number: 5 (lower is better) Translates to: LLCSQFTFLHPSFLICIRSVSSP*SPNIEN Trigger: ATTTTCAATGTTGGGACTCAAAGGTGAAGACACTGA...CCTTATACAGATAAGGAAACTGGGGTGCAGAAAAGTGAATTGACTACAAAGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289361.11 ENST00000414912.2 |
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| CDS TCA 72 bp | CCTGCCAGCAGCAGCTGCTGCTGCTCTAACAAGGCCTaGAGACTCTTCTCAGGGAGCCCTCTCTTTGAGCTA | + |
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Preference number: 6 (lower is better) Translates to: PASSSCCCSNKA*RLFSGSPLFEL Trigger: TAGCTCAAAGAGAGGGCTCCCTGAGAAGAGTCTTCAGGCCTTGTTAGAGCAGCAGCAGCTGCTGCTGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502361.1 |
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| CDS GCA 72 bp | CCAGGAATCTGTCCTCTGGGCAGATTCCTGAGACAGTaGCACTGGGCTCCCTTGTCCTCTGGTTTGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PGICPLGRFLRQ*HWAPLSSGLLL Trigger: CAACAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCTCAGGAATCTGCCCAGAGGACAGATTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425234.6 ENST00000502361.1 |
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| CDS CCA 72 bp | TTCACTCTCCACCCTTCAGCTTTCTCCACCCTCTTCTaGGCCCCAGGAATCTGTCCTCTGGGCAGATTCCTG | + |
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Preference number: 6 (lower is better) Translates to: FTLHPSAFSTLF*APGICPLGRFL Trigger: CAGGAATCTGCCCAGAGGACAGATTCCTGGGGCCCAGAAGAGGGTGGAGAAAGCTGAAGGGTGGAGAGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425234.6 ENST00000502361.1 |
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| CDS CCA 72 bp | ATCTGTCCTCTGGGCAGATTCCTGAGACAGTGCCACTaGGCTCCCTTGTCCTCTGGTTTGCTGTTGGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: ICPLGRFLRQCH*APLSSGLLLGL Trigger: CAAACCCAACAGCAAACCAGAGGACAAGGGAGCCCAGTGGCACTGTCTCAGGAATCTGCCCAGAGGACAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425234.6 ENST00000502361.1 |
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| CDS GCA 72 bp | ACTTCTCCATCCTGCAACGGAAGGAACAGGGGAAGATaGATCAAGGCGCATAAAGCAGGGACAGGAAGACAT | + |
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Preference number: 6 (lower is better) Translates to: TSPSCNGRNRGR*IKAHKAGTGRH Trigger: ATGTCTTCCTGTCCCTGCTTTATGCGCCTTGATGCATCTTCCCCTGTTCCTTCCGTTGCAGGATGGAGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000082468.11 ENST00000502361.1 ENST00000513047.5 |
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| CDS CAA 72 bp | CTGTTGGGAACCATGGGGGCACTGCACTTTTCCTTGTaGCTTTCCCTTAACCCTCCTTTCTGCAAACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LLGTMGALHFSL*LSLNPPFCKPS Trigger: TGAAGGTTTGCAGAAAGGAGGGTTAAGGGAAAGCAACAAGGAAAAGTGCAGTGCCCCCATGGTTCCCAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502361.1 |
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| CDS CAA 72 bp | ACAAGGCCTGAAGACTCTTCTCAGGGAGCCCTCTCTTaGAGCTACTTCTTATTCTGGGTTCCAGTAACTGCC | + |
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Preference number: 6 (lower is better) Translates to: TRPEDSSQGALS*SYFLFWVPVTA Trigger: GGCAGTTACTGGAACCCAGAATAAGAAGTAGCTCAAAGAGAGGGCTCCCTGAGAAGAGTCTTCAGGCCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502361.1 |
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| CDS GCA 72 bp | TGTTGGGAACCATGGGGGCACTGCACTTTTCCTTGTTaGTTTCCCTTAACCCTCCTTTCTGCAAACCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: CWEPWGHCTFPC*FPLTLLSANLQ Trigger: TTGAAGGTTTGCAGAAAGGAGGGTTAAGGGAAAGCAACAAGGAAAAGTGCAGTGCCCCCATGGTTCCCAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502361.1 |
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| CDS GCA 72 bp | CACTTTTCCTTGTTGCTTTCCCTTAACCCTCCTTTCTaGAAACCTTCAACCACGCAGTTTGAACTCATCATC | + |
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Preference number: 6 (lower is better) Translates to: HFSLLLSLNPPF*KPSTTQFELII Trigger: GATGATGAGTTCAAACTGCGTGGTTGAAGGTTTGCAGAAAGGAGGGTTAAGGGAAAGCAACAAGGAAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502361.1 |
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| CDS CAA 72 bp | CTCTGCCAAAAATTCTGTCCTTCAGTGTCTTCACCTTaGAGTCCCAACATTGAAAATCACCTCTTAGCATTC | + |
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Preference number: 6 (lower is better) Translates to: LCQKFCPSVSSP*SPNIENHLLAF Trigger: GAATGCTAAGAGGTGATTTTCAATGTTGGGACTCAAAGGTGAAGACACTGAAGGACAGAATTTTTGGCAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000082468.11 ENST00000289361.11 ENST00000414912.2 ENST00000425234.6 |
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| CDS CAA 72 bp | CTCTGCCAAAAATTCTGTCCTTCAGTGTCTTCACCTTaGAGTCCCAACATTGAAAATCACTCCTCAACAGTT | + |
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Preference number: 6 (lower is better) Translates to: LCQKFCPSVSSP*SPNIENHSSTV Trigger: AACTGTTGAGGAGTGATTTTCAATGTTGGGACTCAAAGGTGAAGACACTGAAGGACAGAATTTTTGGCAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427334.5 |
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