Pregenerated sensors for BTLA (Homo sapiens)
Ensembl gene IDs: ENSG00000186265Ensembl transcript IDs: ENST00000334529.10, ENST00000383680.4, ENST00000474965.1, ENST00000496584.1
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCAGCATTATGTCACATTCCTATCCATTAGTCTATGTGACCCAGTaGGTCTCTACTTTCCTCATAAATGTGCTATACGTTGACTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: SSIMSHSYPLVYVTQ*VSTFLINVLYVDCS Trigger: GGAGCAGTCAACGTATAGCACATTTATGAGGAAAGTAGAGACTCACTGGGTCACATAGACTAATGGATAGGAATGTGACATAATGCTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR CCA 90 bp | AAGTTGTCCACAAATGCAGCCTGGCTAAAACAGCCTATCTCGAATTaGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACT | + |
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Preference number: 1 (lower is better) Translates to: KLSTNAAWLKQPISN*LLEILGVIGKITVT Trigger: AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTTTAGCCAGGCTGCATTTGTGGACAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR TCA 90 bp | CCTGATTCCTTAGTAAGAAGAACAGCAAGATGCAGATGTGGTGAATaGAAGCAAATTGACCCCTACAGACCAATTAAATATTCTGGGTTT | + |
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Preference number: 1 (lower is better) Translates to: PDSLVRRTARCRCGE*KQIDPYRPIKYSGF Trigger: AAACCCAGAATATTTAATTGGTCTGTAGGGGTCAATTTGCTTTCATTCACCACATCTGCATCTTGCTGTTCTTCTTACTAAGGAATCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR CCA 90 bp | TATTCTAACATGTCTTTCTTACATAAGTTGTCCACAAATGCAGCCTaGCTAAAACAGCCTATCTCGAATTGGTTGCTTGAAATTCTAGGT | + |
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Preference number: 1 (lower is better) Translates to: YSNMSFLHKLSTNAA*LKQPISNWLLEILG Trigger: ACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTTTAGCCAGGCTGCATTTGTGGACAACTTATGTAAGAAAGACATGTTAGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR TCA 90 bp | TGGCTAAAACAGCCTATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCTGCAGATGTGGTGAATaGAAGCAAATTGACCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: WLKQPISNWLLEILGVIGCRCGE*KQIDPY Trigger: GTAGGGGTCAATTTGCTTTCATTCACCACATCTGCA...GCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTTTAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR TCA 90 bp | TTGTTTTCAAGAGTGTGTAGTGAACTGATGCAGGTAACACAAACCTCTTTTCCCCTATTCTGCTACTCATaGTGTCAACCAGTTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: LFSRVCSELMQVTQTSFPLFCYS*CQPVLE Trigger: CTCCAAAACTGGTTGACATCATGAGTAGCAGAATAG...GGGAAAAGAGGTTTGTGTTACCTGCATCAGTTCACTACACACTCTTGAAAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR CAA 90 bp | TTGTCCACAAATGCAGCCTGGCTAAAACAGCCTATCTCGAATTGGTaGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTCAA | + |
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Preference number: 2 (lower is better) Translates to: LSTNAAWLKQPISNW*LEILGVIGKITVTQ Trigger: TTGAGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTTTAGCCAGGCTGCATTTGTGGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR TCA 90 bp | CATTATGTCACATTCCTATCCATTAGTCTATGTGACCCAGTGAGTCTCTACTTTATGATGTCAACATGCTaGTCATTCAATGGTCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: HYVTFLSISLCDPVSLYFMMSTC*SFNGPC Trigger: ACAGGGACCATTGAATGATCAGCATGTTGACATCAT...AAAGTAGAGACTCACTGGGTCACATAGACTAATGGATAGGAATGTGACATAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR TCA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTGTTGAGCCCAGACAATaGTGTCAACATGCTGATCAT | + |
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Preference number: 2 (lower is better) Translates to: ISNWLLEILGVIGKITVTVEPRQ*CQHADH Trigger: ATGATCAGCATGTTGACATCATTGTCTGGGCTCAAC...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR TCA 90 bp | TGGCTAAAACAGCCTATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCCTATCAAGTCAAGCATaGAGCAGTTTAAGCTATCTT | + |
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Preference number: 2 (lower is better) Translates to: WLKQPISNWLLEILGVIGLSSQA*SSLSYL Trigger: AAGATAGCTTAAACTGCTTCATGCTTGACTTGATAG...GCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTTTAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR TCA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTTATTTGACATCCTGTTaGGCCCAGACAATGATGTCA | + |
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Preference number: 2 (lower is better) Translates to: ISNWLLEILGVIGKITVTYLTSC*AQTMMS Trigger: TGACATCATTGTCTGGGCTCAACAGGATGTCAAATA...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR GCA 90 bp | TGGCTAAAACAGCCTATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCGTGCTATACGTTGACTaGTCCATTAATACCTATATT | + |
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Preference number: 2 (lower is better) Translates to: WLKQPISNWLLEILGVIGVLYVD*SINTYI Trigger: AATATAGGTATTAATGGAGCAGTCAACGTATAGCAC...GCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTTTAGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR CCA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTATGCTGATCATTCAATaGTCCCTGTTGGAGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: ISNWLLEILGVIGKITVTMLIIQ*SLLESE Trigger: TTCTGACTCCAACAGGGACCATTGAATGATCAGCAT...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR CCA 90 bp | ATTGACCCCTACAGACCAATTAAATATTCTGGGTTTTCCTCCATTCCATTAATTTGTTTGCCAGGTATGTaGAACATCTACCCTATATCC | + |
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Preference number: 2 (lower is better) Translates to: IDPYRPIKYSGFSSIPLICLPGM*NIYPIS Trigger: GGATATAGGGTAGATGTTCCACATACCTGGCAAACA...AATTAATGGAATGGAGGAAAACCCAGAATATTTAATTGGTCTGTAGGGGTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR TCA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTACAGATGATTTGCCCTaGTTCCTTAGTAAGAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: ISNWLLEILGVIGKITVTTDDLP*FLSKKN Trigger: GTTCTTCTTACTAAGGAATCAGGGCAAATCATCTGT...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR GCA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTTCTGAATCCATCTTTTaGTATACTCTTAAGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: ISNWLLEILGVIGKITVTSESIF*YTLKWL Trigger: CAGCCACTTAAGAGTATAGCAAAAGATGGATTCAGA...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR CAA 90 bp | TCCAAAAATCTGAATCCATCTTTTGCTATACTCTTAAGTGGCTGCAACCTCAGTTTATTTGACATCCTGTaGAGCCCAGACAATGATGTC | + |
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Preference number: 3 (lower is better) Translates to: SKNLNPSFAILLSGCNLSLFDIL*SPDNDV Trigger: GACATCATTGTCTGGGCTCAACAGGATGTCAAATAA...ACTGAGGTTGCAGCCACTTAAGAGTATAGCAAAAGATGGATTCAGATTTTTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR CCA 72 bp | ATGTCTTTCTTACATAAGTTGTCCACAAATGCAGCCTaGCTAAAACAGCCTATCTCGAATTGGTTGCTTGAA | + |
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Preference number: 3 (lower is better) Translates to: MSFLHKLSTNAA*LKQPISNWLLE Trigger: TTCAAGCAACCAATTCGAGATAGGCTGTTTTAGCCAGGCTGCATTTGTGGACAACTTATGTAAGAAAGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR CAA 90 bp | TCCAAAAATCTGAATCCATCTTTTGCTATACTCTTAAGTGGCTGCAACCTCAGTTTAAGCTATCTTCACTaGCCCAGTGATACCTATTCT | + |
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Preference number: 3 (lower is better) Translates to: SKNLNPSFAILLSGCNLSLSYLH*PSDTYS Trigger: AGAATAGGTATCACTGGGCAAGTGAAGATAGCTTAA...ACTGAGGTTGCAGCCACTTAAGAGTATAGCAAAAGATGGATTCAGATTTTTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR TCA 72 bp | ATGTCACATTCCTATCCATTAGTCTATGTGACCCAGTaGGTCTCTACTTTCCTCATAAATGTGCTATACGTT | + |
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Preference number: 3 (lower is better) Translates to: MSHSYPLVYVTQ*VSTFLINVLYV Trigger: AACGTATAGCACATTTATGAGGAAAGTAGAGACTCACTGGGTCACATAGACTAATGGATAGGAATGTGACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR CAA 90 bp | CATTATGTCACATTCCTATCCATTAGTCTATGTGACCCAGTGAGTCTCTACTTTGGTTGGTTAGTCAAATaGGGACATTTTGTTTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: HYVTFLSISLCDPVSLYFGWLVK*GHFVFK Trigger: CTTGAAAACAAAATGTCCCAATTTGACTAACCAACC...AAAGTAGAGACTCACTGGGTCACATAGACTAATGGATAGGAATGTGACATAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR TCA 72 bp | AGCAAACTAAAATATGTCACTACAGATGATTTGCCCTaGTTCCTTAGTAAGAAGAACAGCAAGATGCAGATG | + |
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Preference number: 3 (lower is better) Translates to: SKLKYVTTDDLP*FLSKKNSKMQM Trigger: CATCTGCATCTTGCTGTTCTTCTTACTAAGGAATCAGGGCAAATCATCTGTAGTGACATATTTTAGTTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR-3UTR CAA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTGTGAATGAAAGCAAATaGACCCCTACAGACCAATTA | + |
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Preference number: 3 (lower is better) Translates to: ISNWLLEILGVIGKITVTVNESK*TPTDQL Trigger: TAATTGGTCTGTAGGGGTCAATTTGCTTTCATTCAC...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| 3UTR TCA 72 bp | TTAGTAAGAAGAACAGCAAGATGCAGATGTGGTGAATaGAAGCAAATTGACCCCTACAGACCAATTAAATAT | + |
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Preference number: 3 (lower is better) Translates to: LVRRTARCRCGE*KQIDPYRPIKY Trigger: ATATTTAATTGGTCTGTAGGGGTCAATTTGCTTTCATTCACCACATCTGCATCTTGCTGTTCTTCTTACTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR GCA 90 bp | GACATCCTGTTGAGCCCAGACAATGATGTCAACATGCTGATCATTCAATGGTCCACTTCAGACCCTTCCTaGATCCTGAAACAAAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: DILLSPDNDVNMLIIQWSTSDPS*ILKQRS Trigger: TGACCTTTGTTTCAGGATGCAGGAAGGGTCTGAAGT...GGACCATTGAATGATCAGCATGTTGACATCATTGTCTGGGCTCAACAGGATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR GCA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTGAGCCAGGGTCTGCTTaGCATTTCGTCCTTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: ISNWLLEILGVIGKITVTEPGSA*HFVLGG Trigger: CCCTCCAAGGACGAAATGGCAAGCAGACCCTGGCTC...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR CCA 90 bp | CATTATGTCACATTCCTATCCATTAGTCTATGTGACCCAGTGAGTCTCTACTTTTTGCCATTTCGTCCTTaGAGGGTCGTTCTGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: HYVTFLSISLCDPVSLYFLPFRP*RVVLRH Trigger: GTGCCTCAGAACGACCCTCCAAGGACGAAATGGCAA...AAAGTAGAGACTCACTGGGTCACATAGACTAATGGATAGGAATGTGACATAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR TCA 90 bp | GACATCCTGTTGAGCCCAGACAATGATGTCAACATGCTGATCATTCAATGGTCCCTCGAATTGGTTGCTTaGAATTCTAGGTGTAATTGG | + |
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Preference number: 4 (lower is better) Translates to: DILLSPDNDVNMLIIQWSLELVA*NSRCNW Trigger: CCAATTACACCTAGAATTTCAAGCAACCAATTCGAG...GGACCATTGAATGATCAGCATGTTGACATCATTGTCTGGGCTCAACAGGATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR GCA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTACAGGAGCCAGGGTCTaGTTGCCATTTCGTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: ISNWLLEILGVIGKITVTTGARV*LPFRPW Trigger: CCAAGGACGAAATGGCAAGCAGACCCTGGCTCCTGT...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR GCA 90 bp | TTGTTTTCAAGAGTGTGTAGTGAACTGATGCAGGTAACACAAACCTCTTTTCCCGGGAATTTTGCCTGGTaGTTGCTTCTGTTTGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LFSRVCSELMQVTQTSFPGNFAW*LLLFAH Trigger: GTGAGCAAACAGAAGCAAGCACCAGGCAAAATTCCC...GGGAAAAGAGGTTTGTGTTACCTGCATCAGTTCACTACACACTCTTGAAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR TCA 90 bp | ATTGACCCCTACAGACCAATTAAATATTCTGGGTTTTCCTCCATTCCATTAATTCTTTGCTTCGTCTTCTaGGTGCTGCAGAGTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: IDPYRPIKYSGFSSIPLILCFVF*VLQSWV Trigger: GACCCAACTCTGCAGCACTCAGAAGACGAAGCAAAG...AATTAATGGAATGGAGGAAAACCCAGAATATTTAATTGGTCTGTAGGGGTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR TCA 90 bp | CATTATGTCACATTCCTATCCATTAGTCTATGTGACCCAGTGAGTCTCTACTTTCTTGGAGGGTCGTTCTaGGGCACTTTTTACATCTGT | + |
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Preference number: 4 (lower is better) Translates to: HYVTFLSISLCDPVSLYFLGGSF*GTFYIC Trigger: ACAGATGTAAAAAGTGCCTCAGAACGACCCTCCAAG...AAAGTAGAGACTCACTGGGTCACATAGACTAATGGATAGGAATGTGACATAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR TCA 90 bp | CATTATGTCACATTCCTATCCATTAGTCTATGTGACCCAGTGAGTCTCTACTTTTTGAGTTCGGTCCAATaGCAGAATGGTTCAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: HYVTFLSISLCDPVSLYFLSSVQ*QNGSGK Trigger: CTTCCCTGAACCATTCTGTCATTGGACCGAACTCAA...AAAGTAGAGACTCACTGGGTCACATAGACTAATGGATAGGAATGTGACATAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR TCA 90 bp | TGGCTAAAACAGCCTATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCATTTCTTGCCAGTCTTaGGTTCGGTCCAATGACAGA | + |
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Preference number: 4 (lower is better) Translates to: WLKQPISNWLLEILGVIGISCQS*VRSNDR Trigger: TCTGTCATTGGACCGAACTCAAGACTGGCAAGAAAT...GCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTTTAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR CCA 90 bp | TCCAAAAATCTGAATCCATCTTTTGCTATACTCTTAAGTGGCTGCAACCTCAGTTCATTTTGCTTTCCTTaGTGCCTTCTCAGGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SKNLNPSFAILLSGCNLSSFCFP*CLLRQQ Trigger: CTGCTGCCTGAGAAGGCACCAAGGAAAGCAAAATGA...ACTGAGGTTGCAGCCACTTAAGAGTATAGCAAAAGATGGATTCAGATTTTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR TCA 90 bp | AAACAGCCTATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACCCTTCCTGCATCCTaGAACAAAGGTCAGGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: KQPISNWLLEILGVIGKITLPAS*NKGQGH Trigger: ATGACCCTGACCTTTGTTTCAGGATGCAGGAAGGGT...TATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR TCA 90 bp | TTGTTTTCAAGAGTGTGTAGTGAACTGATGCAGGTAACACAAACCTCTTTTCCCTATTTGACATCCTGTTaGGCCCAGACAATGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: LFSRVCSELMQVTQTSFPYLTSC*AQTMMS Trigger: TGACATCATTGTCTGGGCTCAACAGGATGTCAAATA...GGGAAAAGAGGTTTGTGTTACCTGCATCAGTTCACTACACACTCTTGAAAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR GCA 90 bp | AAACAGCCTATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAGCTTCGTCTTCTGAGTaGTGCAGAGTTGGGTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: KQPISNWLLEILGVIGKIASSSE*CRVGSV Trigger: AACTGACCCAACTCTGCAGCACTCAGAAGACGAAGC...TATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR GCA 90 bp | TTGTTTTCAAGAGTGTGTAGTGAACTGATGCAGGTAACACAAACCTCTTTTCCCTTGATCAGTTTCTCGTaGACCATTTCTGTTGTCACC | + |
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Preference number: 4 (lower is better) Translates to: LFSRVCSELMQVTQTSFPLISFS*TISVVT Trigger: GGTGACAACAGAAATGGTGCACGAGAAACTGATCAA...GGGAAAAGAGGTTTGTGTTACCTGCATCAGTTCACTACACACTCTTGAAAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR CCA 90 bp | TGGCTAAAACAGCCTATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCTCTGATAGCAGTACTTaGGAATTTTGCCTGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: WLKQPISNWLLEILGVIGSDSST*EFCLVL Trigger: AAGCACCAGGCAAAATTCCCAAGTACTGCTATCAGA...GCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTTTAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR TCA 90 bp | AAACAGCCTATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATATTGCACCAAGTCACATaGGGCCTGTTAGCACAGTAT | + |
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Preference number: 4 (lower is better) Translates to: KQPISNWLLEILGVIGKILHQVT*GLLAQY Trigger: ATACTGTGCTAACAGGCCTCATGTGACTTGGTGCAA...TATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR TCA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTTGCAGAACAGCGGTATaGCCCATTGTCATTAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: ISNWLLEILGVIGKITVTCRTAV*PIVIRK Trigger: CTTCCTAATGACAATGGGTCATACCGCTGTTCTGCA...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR TCA 90 bp | GTAGCAGCACCTGAGAATTCGAATAGCCTCAAACTGTTGAATAAAATTATAGGCATGATGTCAACATGCTaGTCATTCAATGGTCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: VAAPENSNSLKLLNKIIGMMSTC*SFNGPC Trigger: ACAGGGACCATTGAATGATCAGCATGTTGACATCAT...GCCTATAATTTTATTCAACAGTTTGAGGCTATTCGAATTCTCAGGTGCTGCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR GCA 90 bp | ATTGACCCCTACAGACCAATTAAATATTCTGGGTTTTCCTCCATTCCATTAATTTCGTCTTCTGAGTGCTaGAGAGTTGGGTCAGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: IDPYRPIKYSGFSSIPLISSSEC*RVGSVY Trigger: GTAAACTGACCCAACTCTGCAGCACTCAGAAGACGA...AATTAATGGAATGGAGGAAAACCCAGAATATTTAATTGGTCTGTAGGGGTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR GCA 90 bp | GTAGCAGCACCTGAGAATTCGAATAGCCTCAAACTGTTGAATAAAATTATAGGCTCAGAGAGTTCATTTTaGTTTCCTTGGTGCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VAAPENSNSLKLLNKIIGSESSF*FPWCLL Trigger: GAGAAGGCACCAAGGAAAGCAAAATGAACTCTCTGA...GCCTATAATTTTATTCAACAGTTTGAGGCTATTCGAATTCTCAGGTGCTGCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR CCA 90 bp | CATTATGTCACATTCCTATCCATTAGTCTATGTGACCCAGTGAGTCTCTACTTTGATCTCCTGCTAAGATaGAGTGTTCAGATTGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: HYVTFLSISLCDPVSLYFDLLLR*SVQIVS Trigger: AGAGACAATCTGAACACTCCATCTTAGCAGGAGATC...AAAGTAGAGACTCACTGGGTCACATAGACTAATGGATAGGAATGTGACATAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR CCA 90 bp | CATTATGTCACATTCCTATCCATTAGTCTATGTGACCCAGTGAGTCTCTACTTTATGCTGATCATTCAATaGTCCCTGTTGGAGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HYVTFLSISLCDPVSLYFMLIIQ*SLLESE Trigger: TTCTGACTCCAACAGGGACCATTGAATGATCAGCAT...AAAGTAGAGACTCACTGGGTCACATAGACTAATGGATAGGAATGTGACATAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR TCA 90 bp | GTAGCAGCACCTGAGAATTCGAATAGCCTCAAACTGTTGAATAAAATTATAGGCAAGCTGTACATCACATaGTTCTTTCCCATGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VAAPENSNSLKLLNKIIGKLYIT*FFPMDV Trigger: AACATCCATGGGAAAGAATCATGTGATGTACAGCTT...GCCTATAATTTTATTCAACAGTTTGAGGCTATTCGAATTCTCAGGTGCTGCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR TCA 90 bp | ATTGACCCCTACAGACCAATTAAATATTCTGGGTTTTCCTCCATTCCATTAATTCACATGTTGTTCCATTaGGCTTGCACCAAGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: IDPYRPIKYSGFSSIPLIHMLFH*ACTKSH Trigger: ATGTGACTTGGTGCAAGCTCAATGGAACAACATGTG...AATTAATGGAATGGAGGAAAACCCAGAATATTTAATTGGTCTGTAGGGGTCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR TCA 90 bp | AAACAGCCTATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAGTTGAGCCCAGACAATaGTGTCAACATGCTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQPISNWLLEILGVIGKIVEPRQ*CQHADH Trigger: ATGATCAGCATGTTGACATCATTGTCTGGGCTCAAC...TATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR TCA 90 bp | ACTATTCTGCTACTCATGATGTCAACCAGTTTTGGAGAGATTTTGTTATTCAAGGTCTATGTGACCCAGTaGGTCTCTACTTTCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: TILLLMMSTSFGEILLFKVYVTQ*VSTFLI Trigger: TATGAGGAAAGTAGAGACTCACTGGGTCACATAGAC...CTTGAATAACAAAATCTCTCCAAAACTGGTTGACATCATGAGTAGCAGAATAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR TCA 90 bp | AAACAGCCTATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATATGCAGATGTGGTGAATaGAAGCAAATTGACCCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KQPISNWLLEILGVIGKICRCGE*KQIDPY Trigger: GTAGGGGTCAATTTGCTTTCATTCACCACATCTGCA...TATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR TCA 90 bp | CATTATGTCACATTCCTATCCATTAGTCTATGTGACCCAGTGAGTCTCTACTTTACAGATGATTTGCCCTaGTTCCTTAGTAAGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HYVTFLSISLCDPVSLYFTDDLP*FLSKKN Trigger: GTTCTTCTTACTAAGGAATCAGGGCAAATCATCTGT...AAAGTAGAGACTCACTGGGTCACATAGACTAATGGATAGGAATGTGACATAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR TCA 90 bp | TTGTTTTCAAGAGTGTGTAGTGAACTGATGCAGGTAACACAAACCTCTTTTCCCAGTTTGAGAGAATCATaGAGGAACTGTTCAATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LFSRVCSELMQVTQTSFPSLRES*RNCSIS Trigger: CGAAATTGAACAGTTCCTTCATGATTCTCTCAAACT...GGGAAAAGAGGTTTGTGTTACCTGCATCAGTTCACTACACACTCTTGAAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR GCA 90 bp | GTAGCAGCACCTGAGAATTCGAATAGCCTCAAACTGTTGAATAAAATTATAGGCGTTAATTTCCCTTCCTaGTGTGTCAGAGAGTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: VAAPENSNSLKLLNKIIGVNFPS*CVREFI Trigger: AATGAACTCTCTGACACAGCAGGAAGGGAAATTAAC...GCCTATAATTTTATTCAACAGTTTGAGGCTATTCGAATTCTCAGGTGCTGCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR GCA 90 bp | TTGTTTTCAAGAGTGTGTAGTGAACTGATGCAGGTAACACAAACCTCTTTTCCCTCACTACAGATGATTTaGCCTGATTCCTTAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFSRVCSELMQVTQTSFPSLQMI*PDSLVR Trigger: TCTTACTAAGGAATCAGGGCAAATCATCTGTAGTGA...GGGAAAAGAGGTTTGTGTTACCTGCATCAGTTCACTACACACTCTTGAAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR GCA 90 bp | TCCAAAAATCTGAATCCATCTTTTGCTATACTCTTAAGTGGCTGCAACCTCAGTAGTCATTTGGGAAAATaGATGTATGTCTCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: SKNLNPSFAILLSGCNLSSHLGK*MYVSDT Trigger: GGTGTCAGAGACATACATGCATTTTCCCAAATGACT...ACTGAGGTTGCAGCCACTTAAGAGTATAGCAAAAGATGGATTCAGATTTTTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CCA 90 bp | ACTATTCTGCTACTCATGATGTCAACCAGTTTTGGAGAGATTTTGTTATTCAAGTCCCAGTTCCAAGCATaGCAGGCAATGTCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TILLLMMSTSFGEILLFKSQFQA*QAMSSF Trigger: AAATGAAGACATTGCCTGCCATGCTTGGAACTGGGA...CTTGAATAACAAAATCTCTCCAAAACTGGTTGACATCATGAGTAGCAGAATAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CCA 90 bp | GTAGCAGCACCTGAGAATTCGAATAGCCTCAAACTGTTGAATAAAATTATAGGCAACTCCTCACACATATaGATGCATATTCTGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VAAPENSNSLKLLNKIIGNSSHI*MHILLV Trigger: CACCAACAGAATATGCATCCATATGTGTGAGGAGTT...GCCTATAATTTTATTCAACAGTTTGAGGCTATTCGAATTCTCAGGTGCTGCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| 3UTR CAA 72 bp | GAACAGCAAGATGCAGATGTGGTGAATGAAAGCAAATaGACCCCTACAGACCAATTAAATATTCTGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EQQDADVVNESK*TPTDQLNILGF Trigger: AAAACCCAGAATATTTAATTGGTCTGTAGGGGTCAATTTGCTTTCATTCACCACATCTGCATCTTGCTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| 3UTR CAA 72 bp | AATGCAGCCTGGCTAAAACAGCCTATCTCGAATTGGTaGCTTGAAATTCTAGGTGTAATTGGCAAAATAACA | + |
|
Preference number: 4 (lower is better) Translates to: NAAWLKQPISNW*LEILGVIGKIT Trigger: TGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTTTAGCCAGGCTGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR TCA 90 bp | ACTATTCTGCTACTCATGATGTCAACCAGTTTTGGAGAGATTTTGTTATTCAAGTGCTCACTCTTAAGGTaGGCATCAACCAGGTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: TILLLMMSTSFGEILLFKCSLLR*ASTRLI Trigger: AATTAACCTGGTTGATGCTCACCTTAAGAGTGAGCA...CTTGAATAACAAAATCTCTCCAAAACTGGTTGACATCATGAGTAGCAGAATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTCTATTCTGCTACTCATaGTGTCAACCAGTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISNWLLEILGVIGKITVTLFCYS*CQPVLE Trigger: CTCCAAAACTGGTTGACATCATGAGTAGCAGAATAG...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR TCA 90 bp | GTAGCAGCACCTGAGAATTCGAATAGCCTCAAACTGTTGAATAAAATTATAGGCCTATCAAGTCAAGCATaGAGCAGTTTAAGCTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VAAPENSNSLKLLNKIIGLSSQA*SSLSYL Trigger: AAGATAGCTTAAACTGCTTCATGCTTGACTTGATAG...GCCTATAATTTTATTCAACAGTTTGAGGCTATTCGAATTCTCAGGTGCTGCTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR GCA 90 bp | ACTATTCTGCTACTCATGATGTCAACCAGTTTTGGAGAGATTTTGTTATTCAAGATTTTGCCTGGTGCTTaGTTCTGTTTGCTCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TILLLMMSTSFGEILLFKILPGA*FCLLTL Trigger: AAGAGTGAGCAAACAGAAGCAAGCACCAGGCAAAAT...CTTGAATAACAAAATCTCTCCAAAACTGGTTGACATCATGAGTAGCAGAATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CCA 90 bp | ATTGACCCCTACAGACCAATTAAATATTCTGGGTTTTCCTCCATTCCATTAATTCATGATTCTTTCCCATaGATGTTCCAGATGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IDPYRPIKYSGFSSIPLIHDSFP*MFQMSR Trigger: TCTGGACATCTGGAACATCCATGGGAAAGAATCATG...AATTAATGGAATGGAGGAAAACCCAGAATATTTAATTGGTCTGTAGGGGTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CCA 90 bp | ACTATTCTGCTACTCATGATGTCAACCAGTTTTGGAGAGATTTTGTTATTCAAGTGTTTGCCAGGTATGTaGAACATCTACCCTATATCC | + |
|
Preference number: 4 (lower is better) Translates to: TILLLMMSTSFGEILLFKCLPGM*NIYPIS Trigger: GGATATAGGGTAGATGTTCCACATACCTGGCAAACA...CTTGAATAACAAAATCTCTCCAAAACTGGTTGACATCATGAGTAGCAGAATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CCA 90 bp | TCCAAAAATCTGAATCCATCTTTTGCTATACTCTTAAGTGGCTGCAACCTCAGTTGCTATACTCTTAAGTaGCTGCAACCTCAGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKNLNPSFAILLSGCNLSCYTLK*LQPQYF Trigger: AAAATACTGAGGTTGCAGCCACTTAAGAGTATAGCA...ACTGAGGTTGCAGCCACTTAAGAGTATAGCAAAAGATGGATTCAGATTTTTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR TCA 90 bp | AAACAGCCTATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATACACATAAAGAGTTGTTaGGTGGCTTTCAATGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: KQPISNWLLEILGVIGKIHIKSC*VAFNEI Trigger: AATCTCATTGAAAGCCACTCAACAACTCTTTATGTG...TATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR GCA 90 bp | ATTGACCCCTACAGACCAATTAAATATTCTGGGTTTTCCTCCATTCCATTAATTTCTGAATCCATCTTTTaGTATACTCTTAAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IDPYRPIKYSGFSSIPLISESIF*YTLKWL Trigger: CAGCCACTTAAGAGTATAGCAAAAGATGGATTCAGA...AATTAATGGAATGGAGGAAAACCCAGAATATTTAATTGGTCTGTAGGGGTCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR GCA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTACTCAAAAGAATATTTaGACCCCCAAATCTAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISNWLLEILGVIGKITVTTQKNI*TPKSKE Trigger: CTCCTTAGATTTGGGGGTGCAAATATTCTTTTGAGT...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR GCA 90 bp | ATTGACCCCTACAGACCAATTAAATATTCTGGGTTTTCCTCCATTCCATTAATTGTGCTATACGTTGACTaGTCCATTAATACCTATATT | + |
|
Preference number: 4 (lower is better) Translates to: IDPYRPIKYSGFSSIPLIVLYVD*SINTYI Trigger: AATATAGGTATTAATGGAGCAGTCAACGTATAGCAC...AATTAATGGAATGGAGGAAAACCCAGAATATTTAATTGGTCTGTAGGGGTCAAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS GCA 90 bp | TGGAAGAGACTGGAAGTCCTTGCTCTGGGGACATTCCATACTCAATaGCAGAAATGCTGCTGTCCTGTCACCTATGTAGCCAAGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WKRLEVLALGTFHTQ*QKCCCPVTYVAKIS Trigger: GGAGATCTTGGCTACATAGGTGACAGGACAGCAGCATTTCTGGCATTGAGTATGGAATGTCCCCAGAGCAAGGACTTCCAGTCTCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496584.1 |
||
| CDS GCA 90 bp | CTGGAAGTCCTTGCTCTGGGGACATTCCATACTCAATGCCAGAAATaGTGCTGTCCTGTCACCTATGTAGCCAAGATCTCCTACTACCTA | + |
|
Preference number: 5 (lower is better) Translates to: LEVLALGTFHTQCQK*CCPVTYVAKISYYL Trigger: TAGGTAGTAGGAGATCTTGGCTACATAGGTGACAGGACAGCAGCATTTCTGGCATTGAGTATGGAATGTCCCCAGAGCAAGGACTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496584.1 |
||
| CDS GCA 90 bp | GAAGTCCTTGCTCTGGGGACATTCCATACTCAATGCCAGAAATGCTaGTGTCCTGTCACCTATGTAGCCAAGATCTCCTACTACCTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: EVLALGTFHTQCQKC*CPVTYVAKISYYLV Trigger: AACTAGGTAGTAGGAGATCTTGGCTACATAGGTGACAGGACAGCAGCATTTCTGGCATTGAGTATGGAATGTCCCCAGAGCAAGGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496584.1 |
||
| CDS CCA 90 bp | GAAGTAAACGATACAGGAGCCAGGGTCTGCTTGCCATTTCGTCCTTaGAGGGTCGTTCTGAGGCACTTTTTACATCTGTCACATAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EVNDTGARVCLPFRP*RVVLRHFLHLSHKE Trigger: CTCTTTATGTGACAGATGTAAAAAGTGCCTCAGAACGACCCTCCAAGGACGAAATGGCAAGCAGACCCTGGCTCCTGTATCGTTTACTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CAA 90 bp | GTAGCAGCACCTGAGAATTCGAATAGCCTCAAACTGTTGAATAAAATTATAGGCCTTGCCATTTCGTCCTaGGAGGGTCGTTCTGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VAAPENSNSLKLLNKIIGLAISS*EGRSEA Trigger: TGCCTCAGAACGACCCTCCAAGGACGAAATGGCAAG...GCCTATAATTTTATTCAACAGTTTGAGGCTATTCGAATTCTCAGGTGCTGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CAA 90 bp | ATTGACCCCTACAGACCAATTAAATATTCTGGGTTTTCCTCCATTCCATTAATTGGAGCCAGGGTCTGCTaGCCATTTCGTCCTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IDPYRPIKYSGFSSIPLIGARVC*PFRPWR Trigger: CCTCCAAGGACGAAATGGCAAGCAGACCCTGGCTCC...AATTAATGGAATGGAGGAAAACCCAGAATATTTAATTGGTCTGTAGGGGTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CAA 90 bp | GACATCCTGTTGAGCCCAGACAATGATGTCAACATGCTGATCATTCAATGGTCCTTATTTGACATCCTGTaGAGCCCAGACAATGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: DILLSPDNDVNMLIIQWSLFDIL*SPDNDV Trigger: GACATCATTGTCTGGGCTCAACAGGATGTCAAATAA...GGACCATTGAATGATCAGCATGTTGACATCATTGTCTGGGCTCAACAGGATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS CCA 90 bp | GTTCGGTCCAATGACAGAATGGTTCAGGGAAGCATAAACAATGCCTaGTTTGTTTTCTTCCAGGCATGGATTAGAATAAACTTCAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: VRSNDRMVQGSINNA*FVFFQAWIRINFRP Trigger: GGGTCTGAAGTTTATTCTAATCCATGCCTGGAAGAAAACAAACCAGGCATTGTTTATGCTTCCCTGAACCATTCTGTCATTGGACCGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000334529.10 ENST00000383680.4 ENST00000474965.1 |
||
| CDS CCA 90 bp | ATCCTGTTGAGCCCAGACAATGATGTCAACATGCTGATCATTCAATaGTCCCTGTTGGAGTCAGAAACAGACTTAACTCCTCACACATAT | + |
|
Preference number: 5 (lower is better) Translates to: ILLSPDNDVNMLIIQ*SLLESETDLTPHTY Trigger: ATATGTGTGAGGAGTTAAGTCTGTTTCTGACTCCAACAGGGACCATTGAATGATCAGCATGTTGACATCATTGTCTGGGCTCAACAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334529.10 ENST00000474965.1 |
||
| CDS-3UTR CAA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTCTGAGTGCTGCAGAGTaGGGTCAGTTTACCTACCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISNWLLEILGVIGKITVTLSAAE*GQFTYP Trigger: GGGGTAGGTAAACTGACCCAACTCTGCAGCACTCAG...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CAA 90 bp | TCCAAAAATCTGAATCCATCTTTTGCTATACTCTTAAGTGGCTGCAACCTCAGTGGTGCTTGCTTCTGTTaGCTCACTCTTAAGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKNLNPSFAILLSGCNLSGACFC*LTLKVS Trigger: GCTCACCTTAAGAGTGAGCAAACAGAAGCAAGCACC...ACTGAGGTTGCAGCCACTTAAGAGTATAGCAAAAGATGGATTCAGATTTTTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CAA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTCGTGCACCATTTCTGTaGTCACCCACCCCACCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISNWLLEILGVIGKITVTRAPFL*SPTPPN Trigger: GTTAGGTGGGGTGGGTGACAACAGAAATGGTGCACG...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CAA 90 bp | CATTATGTCACATTCCTATCCATTAGTCTATGTGACCCAGTGAGTCTCTACTTTTTCATTTTGCTTTCCTaGGTGCCTTCTCAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HYVTFLSISLCDPVSLYFFILLS*VPSQAA Trigger: TGCTGCCTGAGAAGGCACCAAGGAAAGCAAAATGAA...AAAGTAGAGACTCACTGGGTCACATAGACTAATGGATAGGAATGTGACATAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS TCA 90 bp | TTGGTGCTTCTTTTACATTTCTTGCCAGTCTTGAGTTCGGTCCAATaGCAGAATGGTTCAGGGAAGCATAAACAATGCCTGGTTTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVLLLHFLPVLSSVQ*QNGSGKHKQCLVCF Trigger: AAAACAAACCAGGCATTGTTTATGCTTCCCTGAACCATTCTGTCATTGGACCGAACTCAAGACTGGCAAGAAATGTAAAAGAAGCACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000334529.10 ENST00000383680.4 ENST00000474965.1 |
||
| CDS-3UTR CAA 90 bp | ATTGACCCCTACAGACCAATTAAATATTCTGGGTTTTCCTCCATTCCATTAATTCAGCGGTATGACCCATaGTCATTAGGAAGCACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IDPYRPIKYSGFSSIPLIQRYDP*SLGSTG Trigger: ACCAGTGCTTCCTAATGACAATGGGTCATACCGCTG...AATTAATGGAATGGAGGAAAACCCAGAATATTTAATTGGTCTGTAGGGGTCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS CCA 90 bp | ATGGGATTAAGAAGAAGACCCAAAATAATTTCCCAGTTCCAAGCATaGCAGGCAATGTCTTCATTTCCTGCACATATCAGTGATGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: MGLRRRPKIISQFQA*QAMSSFPAHISDGK Trigger: TTTTCCATCACTGATATGTGCAGGAAATGAAGACATTGCCTGCCATGCTTGGAACTGGGAAATTATTTTGGGTCTTCTTCTTAATCCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CAA 90 bp | AAACAGCCTATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATACAGTACTTGGGAATTTaGCCTGGTGCTTGCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KQPISNWLLEILGVIGKIQYLGI*PGACFC Trigger: ACAGAAGCAAGCACCAGGCAAAATTCCCAAGTACTG...TATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CAA 90 bp | CATTATGTCACATTCCTATCCATTAGTCTATGTGACCCAGTGAGTCTCTACTTTATTCAATGGTCCCTGTaGGAGTCAGAAACAGACTTA | + |
|
Preference number: 5 (lower is better) Translates to: HYVTFLSISLCDPVSLYFIQWSL*ESETDL Trigger: TAAGTCTGTTTCTGACTCCAACAGGGACCATTGAAT...AAAGTAGAGACTCACTGGGTCACATAGACTAATGGATAGGAATGTGACATAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CAA 90 bp | GTAGCAGCACCTGAGAATTCGAATAGCCTCAAACTGTTGAATAAAATTATAGGCTCTTTCTTACATAAGTaGTCCACAAATGCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VAAPENSNSLKLLNKIIGSFLHK*STNAAW Trigger: CCAGGCTGCATTTGTGGACAACTTATGTAAGAAAGA...GCCTATAATTTTATTCAACAGTTTGAGGCTATTCGAATTCTCAGGTGCTGCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
||
| CDS-3UTR CAA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTACACATGTTGTTCCATaGAGCTTGCACCAAGTCACA | + |
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Preference number: 5 (lower is better) Translates to: ISNWLLEILGVIGKITVTTHVVP*SLHQVT Trigger: TGTGACTTGGTGCAAGCTCAATGGAACAACATGTGT...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR CAA 90 bp | CATTATGTCACATTCCTATCCATTAGTCTATGTGACCCAGTGAGTCTCTACTTTGTGAATGAAAGCAAATaGACCCCTACAGACCAATTA | + |
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Preference number: 5 (lower is better) Translates to: HYVTFLSISLCDPVSLYFVNESK*TPTDQL Trigger: TAATTGGTCTGTAGGGGTCAATTTGCTTTCATTCAC...AAAGTAGAGACTCACTGGGTCACATAGACTAATGGATAGGAATGTGACATAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR CAA 90 bp | ACTATTCTGCTACTCATGATGTCAACCAGTTTTGGAGAGATTTTGTTATTCAAGCTTCTTTTACATTTCTaGCCAGTCTTGAGTTCGGTC | + |
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Preference number: 5 (lower is better) Translates to: TILLLMMSTSFGEILLFKLLLHF*PVLSSV Trigger: GACCGAACTCAAGACTGGCAAGAAATGTAAAAGAAG...CTTGAATAACAAAATCTCTCCAAAACTGGTTGACATCATGAGTAGCAGAATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR CAA 90 bp | ATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAACAGTGACTCCTATCTCGAATTGGTaGCTTGAAATTCTAGGTGTA | + |
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Preference number: 5 (lower is better) Translates to: ISNWLLEILGVIGKITVTPISNW*LEILGV Trigger: TACACCTAGAATTTCAAGCAACCAATTCGAGATAGG...AGTCACTGTTATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR CAA 90 bp | AAACAGCCTATCTCGAATTGGTTGCTTGAAATTCTAGGTGTAATTGGCAAAATAGGTTGGTTAGTCAAATaGGGACATTTTGTTTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: KQPISNWLLEILGVIGKIGWLVK*GHFVFK Trigger: CTTGAAAACAAAATGTCCCAATTTGACTAACCAACC...TATTTTGCCAATTACACCTAGAATTTCAAGCAACCAATTCGAGATAGGCTGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS-3UTR CAA 90 bp | ATTGACCCCTACAGACCAATTAAATATTCTGGGTTTTCCTCCATTCCATTAATTAACTTTACCTTCTCATaGAGCACAATCACAAGCTTA | + |
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Preference number: 5 (lower is better) Translates to: IDPYRPIKYSGFSSIPLINFTFS*STITSL Trigger: TAAGCTTGTGATTGTGCTCAATGAGAAGGTAAAGTT...AATTAATGGAATGGAGGAAAACCCAGAATATTTAATTGGTCTGTAGGGGTCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS GCA 72 bp | CCCCCAAAGGAAGTAAACGATACAGGAGCCAGGGTCTaGTTGCCATTTCGTCCTTGGAGGGTCGTTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: PPKEVNDTGARV*LPFRPWRVVLR Trigger: CCTCAGAACGACCCTCCAAGGACGAAATGGCAAGCAGACCCTGGCTCCTGTATCGTTTACTTCCTTTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS CAA 72 bp | CCAAAGGAAGTAAACGATACAGGAGCCAGGGTCTGCTaGCCATTTCGTCCTTGGAGGGTCGTTCTGAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: PKEVNDTGARVC*PFRPWRVVLRH Trigger: GTGCCTCAGAACGACCCTCCAAGGACGAAATGGCAAGCAGACCCTGGCTCCTGTATCGTTTACTTCCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS CAA 72 bp | CGATACAGGAGCCAGGGTCTGCTTGCCATTTCGTCCTaGGAGGGTCGTTCTGAGGCACTTTTTACATCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RYRSQGLLAISS*EGRSEALFTSV Trigger: GACAGATGTAAAAAGTGCCTCAGAACGACCCTCCAAGGACGAAATGGCAAGCAGACCCTGGCTCCTGTATCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS GCA 72 bp | ACTGCTCAAGTAGAAGGCTTTGCTTCGTCTTCTGAGTaGTGCAGAGTTGGGTCAGTTTACCTACCCCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: TAQVEGFASSSE*CRVGSVYLPQW Trigger: CCACTGGGGTAGGTAAACTGACCCAACTCTGCAGCACTCAGAAGACGAAGCAAAGCCTTCTACTTGAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS GCA 72 bp | CTGGAAGTCCTTGCTCTGGGGACATTCCATACTCAATaGCAGAAATGCTGCTGTCCTGTCACCTATGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: LEVLALGTFHTQ*QKCCCPVTYVA Trigger: GGCTACATAGGTGACAGGACAGCAGCATTTCTGGCATTGAGTATGGAATGTCCCCAGAGCAAGGACTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496584.1 |
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| CDS CCA 72 bp | GATACAGGAGCCAGGGTCTGCTTGCCATTTCGTCCTTaGAGGGTCGTTCTGAGGCACTTTTTACATCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: DTGARVCLPFRP*RVVLRHFLHLS Trigger: TGACAGATGTAAAAAGTGCCTCAGAACGACCCTCCAAGGACGAAATGGCAAGCAGACCCTGGCTCCTGTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS GCA 72 bp | GCTCTGGGGACATTCCATACTCAATGCCAGAAATGCTaGTGTCCTGTCACCTATGTAGCCAAGATCTCCTAC | + |
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Preference number: 6 (lower is better) Translates to: ALGTFHTQCQKC*CPVTYVAKISY Trigger: GTAGGAGATCTTGGCTACATAGGTGACAGGACAGCAGCATTTCTGGCATTGAGTATGGAATGTCCCCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496584.1 |
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| CDS GCA 72 bp | CTTGCTCTGGGGACATTCCATACTCAATGCCAGAAATaGTGCTGTCCTGTCACCTATGTAGCCAAGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: LALGTFHTQCQK*CCPVTYVAKIS Trigger: GGAGATCTTGGCTACATAGGTGACAGGACAGCAGCATTTCTGGCATTGAGTATGGAATGTCCCCAGAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496584.1 |
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| CDS TCA 72 bp | GGGTCTGCTTGCCATTTCGTCCTTGGAGGGTCGTTCTaGGGCACTTTTTACATCTGTCACATAAAGAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: GSACHFVLGGSF*GTFYICHIKSC Trigger: ACAACTCTTTATGTGACAGATGTAAAAAGTGCCTCAGAACGACCCTCCAAGGACGAAATGGCAAGCAGACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS TCA 72 bp | ACACATGTTGTTCCATTGAGCTTGCACCAAGTCACATaGGGCCTGTTAGCACAGTATTTCACAGGGCATTCT | + |
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Preference number: 6 (lower is better) Translates to: THVVPLSLHQVT*GLLAQYFTGHS Trigger: AGAATGCCCTGTGAAATACTGTGCTAACAGGCCTCATGTGACTTGGTGCAAGCTCAATGGAACAACATGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334529.10 ENST00000383680.4 |
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| CDS GCA 72 bp | CTTAAGGTGAGCATCAACCAGGTTAATTTCCCTTCCTaGTGTGTCAGAGAGTTCATTTTGCTTTCCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LKVSINQVNFPS*CVREFILLSSS Trigger: AGAGCTGGAAAGCAAAATGAACTCTCTGACACAGCAGGAAGGGAAATTAACCTGGTTGATGCTCACCTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474965.1 |
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| CDS CAA 72 bp | CAGTACTTGGGAATTTTGCCTGGTGCTTGCTTCTGTTaGCTCACTCTTAAGGTGAGCATCAACCAGGTTAAT | + |
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Preference number: 6 (lower is better) Translates to: QYLGILPGACFC*LTLKVSINQVN Trigger: ATTAACCTGGTTGATGCTCACCTTAAGAGTGAGCAAACAGAAGCAAGCACCAGGCAAAATTCCCAAGTACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000334529.10 ENST00000383680.4 ENST00000474965.1 |
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| CDS CAA 90 bp | AGCCCAGACAATGATGTCAACATGCTGATCATTCAATGGTCCCTGTaGGAGTCAGAAACAGACTTAACTCCTCACACATATGGATGCATA | + |
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Preference number: 6 (lower is better) Translates to: SPDNDVNMLIIQWSL*ESETDLTPHTYGCI Trigger: TATGCATCCATATGTGTGAGGAGTTAAGTCTGTTTCTGACTCCAACAGGGACCATTGAATGATCAGCATGTTGACATCATTGTCTGGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334529.10 ENST00000474965.1 |
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| CDS TCA 72 bp | CTTTTACATTTCTTGCCAGTCTTGAGTTCGGTCCAATaGCAGAATGGTTCAGGGAAGCATAAACAATGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LLHFLPVLSSVQ*QNGSGKHKQCL Trigger: CAGGCATTGTTTATGCTTCCCTGAACCATTCTGTCATTGGACCGAACTCAAGACTGGCAAGAAATGTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000334529.10 ENST00000383680.4 ENST00000474965.1 |
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| CDS GCA 72 bp | CCAGAAGTTCTCACTCCAAAATACCAGAAGCACTTTTaGCCAGTCAAAGGTTATTCCTGTGTCACACAGAAT | + |
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Preference number: 6 (lower is better) Translates to: PEVLTPKYQKHF*PVKGYSCVTQN Trigger: ATTCTGTGTGACACAGGAATAACCTTTGACTGGGCAAAAGTGCTTCTGGTATTTTGGAGTGAGAACTTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496584.1 |
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| CDS CCA 72 bp | AGAAGAAGACCCAAAATAATTTCCCAGTTCCAAGCATaGCAGGCAATGTCTTCATTTCCTGCACATATCAGT | + |
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Preference number: 6 (lower is better) Translates to: RRRPKIISQFQA*QAMSSFPAHIS Trigger: ACTGATATGTGCAGGAAATGAAGACATTGCCTGCCATGCTTGGAACTGGGAAATTATTTTGGGTCTTCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334529.10 |
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| CDS CAA 90 bp | AAAGATGATGAAAGATACAGAGAGGCCATAGAAAGAGCCATGGAGTaGCAGATGAAGAATTGGGGTAAGAGAGAATTCTTCAGAATCCAG | + |
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Preference number: 6 (lower is better) Translates to: KDDERYREAIERAME*QMKNWGKREFFRIQ Trigger: CTGGATTCTGAAGAATTCTCTCTTACCCCAATTCTTCATCTGCAACTCCATGGCTCTTTCTATGGCCTCTCTGTATCTTTCATCATCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496584.1 |
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| CDS CCA 72 bp | CAGGGCATTCTAGTTCAAAGGGATCTCCTGCTAAGATaGAGTGTTCAGATTGTCTCTTTATATAAAGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: QGILVQRDLLLR*SVQIVSLYKAV Trigger: TACAGCTTTATATAAAGAGACAATCTGAACACTCCATCTTAGCAGGAGATCCCTTTGAACTAGAATGCCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334529.10 ENST00000383680.4 |
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| CDS CAA 72 bp | AATGATGTCAACATGCTGATCATTCAATGGTCCCTGTaGGAGTCAGAAACAGACTTAACTCCTCACACATAT | + |
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Preference number: 6 (lower is better) Translates to: NDVNMLIIQWSL*ESETDLTPHTY Trigger: ATATGTGTGAGGAGTTAAGTCTGTTTCTGACTCCAACAGGGACCATTGAATGATCAGCATGTTGACATCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334529.10 ENST00000474965.1 |
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