RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BTK (Homo sapiens)

Ensembl gene IDs: ENSG00000010671

Ensembl transcript IDs: ENST00000308731.8, ENST00000372880.5, ENST00000464567.1, ENST00000470329.1, ENST00000478995.1, ENST00000488970.1, ENST00000618050.4, ENST00000621635.4

Found 426 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTaGATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAG +
Preference number: 1 (lower is better)
Translates to: WPLLRSHYPRESKKR*IPRCREGPFCIEWE
Trigger: CTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR TCA 90 bp ATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACGGGGCCTTTTTGTATTaGGTGGGAGCACAAAGGCTC +
Preference number: 2 (lower is better)
Translates to: ISFLPNSVHPHTHTPKLYGAFLY*VGAQRL
Trigger: GAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCC...GTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR GCA 90 bp GAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTTGTTGGACCCCTTTGTaGGGCTATTTACATCCTCCC +
Preference number: 2 (lower is better)
Translates to: EGPFCIEWEHKGSRAPKLCWTPL*GYLHPP
Trigger: GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACA...AAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR TCA 90 bp GAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGCTTGGGATTTCCTCTaGGAAAGTGAAATTGGGGCT +
Preference number: 2 (lower is better)
Translates to: EGPFCIEWEHKGSRAPKLAWDFL*ESEIGA
Trigger: AGCCCCAATTTCACTTTCTCAGAGGAAATCCCAAGC...AAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CCA 90 bp TTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGTACTCAAAGAGCTGTTaGACCCCTTTGTGCGGCTAT +
Preference number: 2 (lower is better)
Translates to: FLPNSVHPHTHTPKLYQMYSKSC*TPLCGY
Trigger: ATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTA...CATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR CAA 90 bp CAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATaGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTT +
Preference number: 2 (lower is better)
Translates to: QRRGAFPDVERGLFV*SGSTKAPGLLSLGF
Trigger: AAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CCA 90 bp GAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGCACAATAATTTCTTaGCCTTTGCTCAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: EGPFCIEWEHKGSRAPKLGTIIS*PLLRSH
Trigger: GTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCC...AAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CCA 90 bp TATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCTACTCAAAGAGCTGTTaGACCCCTTTGTGCGGCTAT +
Preference number: 2 (lower is better)
Translates to: YDTISFLPNSVHPHTHTPYSKSC*TPLCGY
Trigger: ATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTA...GGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR GCA 90 bp TTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGTCATCTGCTTTCTCATaGCAGCAACTGTACATGATG +
Preference number: 2 (lower is better)
Translates to: FLPNSVHPHTHTPKLYQMSSAFS*QQLYMM
Trigger: CATCATGTACAGTTGCTGGCATGAGAAAGCAGATGA...CATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618050.4
3UTR-3UTR TCA 90 bp TTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCATTTCCTCTGAGAAAGTaGAATTGGGGCTTGTGGAGA +
Preference number: 2 (lower is better)
Translates to: FPDVERGLFVLSGSTKAPFPLRK*NWGLWR
Trigger: TCTCCACAAGCCCCAATTTCACTTTCTCAGAGGAAA...TGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR TCA 90 bp GAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGGGGCCTTTTTGTATTaGGTGGGAGCACAAAGGCTC +
Preference number: 2 (lower is better)
Translates to: EISGTIISWPLLRSHYPRGAFLY*VGAQRL
Trigger: GAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCC...CCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR TCA 90 bp CTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATGCTTGGGATTTCCTCTaGGAAAGTGAAATTGGGGCT +
Preference number: 2 (lower is better)
Translates to: LPNAYSKSCWTPLCGYLHAWDFL*ESEIGA
Trigger: AGCCCCAATTTCACTTTCTCAGAGGAAATCCCAAGC...ATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR TCA 90 bp CGGGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCGCTTGGGATTTCCTCTaGGAAAGTGAAATTGGGGCT +
Preference number: 2 (lower is better)
Translates to: REISGTIISWPLLRSHYPAWDFL*ESEIGA
Trigger: AGCCCCAATTTCACTTTCTCAGAGGAAATCCCAAGC...GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR GCA 90 bp TTTATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATaGCTACTCAAAGAGCTGTTG +
Preference number: 2 (lower is better)
Translates to: FMTPFHSCQIRSTPTHTPPSSTK*LLKELL
Trigger: CAACAGCTCTTTGAGTAGGCATTTGGTAGAGCTTGG...GGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CCA 90 bp AAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGGGCACAATAATTTCTTaGCCTTTGCTCAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: KKRCIPRCREGPFCIEWEGTIIS*PLLRSH
Trigger: GTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCC...CTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CCA 90 bp AATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCAGTAAATCTCTCATATaGCATCTTCCCCAGGGAGTA +
Preference number: 2 (lower is better)
Translates to: NAYSKSCWTPLCGYLHPPSKSLI*HLPQGV
Trigger: TACTCCCTGGGGAAGATGCCATATGAGAGATTTACT...GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618050.4
3UTR-3UTR GCA 90 bp AAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGGAATCAAAGAAGAGGTaGATTCCCAGATGTAGAGAG +
Preference number: 2 (lower is better)
Translates to: KKRCIPRCREGPFCIEWEESKKR*IPRCRE
Trigger: CTCTCTACATCTGGGAATGCACCTCTTCTTTGATTC...CTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR GCA 90 bp TTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCCCAAGCTCTACCAAATaGCTACTCAAAGAGCTGTTG +
Preference number: 2 (lower is better)
Translates to: FRHNNFLAFAQKPLSQGIPSSTK*LLKELL
Trigger: CAACAGCTCTTTGAGTAGGCATTTGGTAGAGCTTGG...GATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR TCA 90 bp GAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTTTCCTCTGAGAAAGTaGAATTGGGGCTTGTGGAGA +
Preference number: 2 (lower is better)
Translates to: ESKKRCIPRCREGPFCIEFPLRK*NWGLWR
Trigger: TCTCCACAAGCCCCAATTTCACTTTCTCAGAGGAAA...CTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR CAA 90 bp CAGTCTGTCTTAATTCTCTCGGGAAATTTCAGGCACAATAATTTCTaGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: QSVLILSGNFRHNNF*AFAQKPLSQGIKEE
Trigger: CTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCGAGAGAATTAAGACAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR GCA 90 bp GAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTaGATTCCCAGATGTAGAGAG +
Preference number: 2 (lower is better)
Translates to: EISGTIISWPLLRSHYPRESKKR*IPRCRE
Trigger: CTCTCTACATCTGGGAATGCACCTCTTCTTTGATTC...CCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR CAA 90 bp CAGGATTCTTCATCCATGACATCTAGAATATTGCTCAGAAGAATTTaGAAAGTGGGACGCTCATCTGCTTTCTCATGCCAGCAACTGTAC +
Preference number: 2 (lower is better)
Translates to: QDSSSMTSRILLRRI*KVGRSSAFSCQQLY
Trigger: GTACAGTTGCTGGCATGAGAAAGCAGATGAGCGTCCCACTTTCAAAATTCTTCTGAGCAATATTCTAGATGTCATGGATGAAGAATCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618050.4
3UTR-3UTR TCA 90 bp AATATTTTCATCGCAAATTCAGTCTGTCTTAATTCTCTCGGGAAATTTCAGGCAGCCAGCAACTGTACATaGTGGTATATACCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: NIFIANSVCLNSLGKFQAASNCT*WYIPSL
Trigger: CAGAGAAGGTATATACCATCATGTACAGTTGCTGGC...TGCCTGAAATTTCCCGAGAGAATTAAGACAGACTGAATTTGCGATGAAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618050.4
3UTR-3UTR CAA 90 bp TTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCAGGGCTCCTAAGCTaGGGATTTCCTCTGAGAAAG +
Preference number: 3 (lower is better)
Translates to: FLPNSVHPHTHTPKLYQMPGLLS*GFPLRK
Trigger: CTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGG...CATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CAA 90 bp AGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCCCAGGGCTCCTAAGCTaGGGATTTCCTCTGAGAAAG +
Preference number: 3 (lower is better)
Translates to: RRGAFPDVERGLFVLSGSPGLLS*GFPLRK
Trigger: CTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGG...GCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CAA 90 bp AATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCCCAGGGCTCCTAAGCTaGGGATTTCCTCTGAGAAAG +
Preference number: 3 (lower is better)
Translates to: NAYSKSCWTPLCGYLHPPPGLLS*GFPLRK
Trigger: CTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGG...GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CAA 90 bp TTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGATAATTTCTTGGCCTTaGCTCAGAAGCCACTATCCC +
Preference number: 3 (lower is better)
Translates to: FLPNSVHPHTHTPKLYQMIISWP*LRSHYP
Trigger: GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTAT...CATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CAA 90 bp GAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTAGGCACAATAATTTCTaGGCCTTTGCTCAGAAGCCA +
Preference number: 3 (lower is better)
Translates to: EGPFCIEWEHKGSRAPKLRHNNF*AFAQKP
Trigger: TGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCT...AAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CAA 90 bp CCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTAGCTGTTGGACCCCTTaGTGCGGCTATTTACATCCT +
Preference number: 3 (lower is better)
Translates to: PFCIEWEHKGSRAPKLGISCWTP*CGYLHP
Trigger: AGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCT...AATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CAA 90 bp TTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCACTACTCAAAGAGCTGTaGGACCCCTTTGTGCGGCTA +
Preference number: 3 (lower is better)
Translates to: FLGLCSEATIPGNQRRGALLKEL*DPFVRL
Trigger: TAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAG...TGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CAA 90 bp TTTATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCAGGGGCCTTTTTGTATaGAGTGGGAGCACAAAGGCT +
Preference number: 3 (lower is better)
Translates to: FMTPFHSCQIRSTPTHTPRGLFV*SGSTKA
Trigger: AGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCT...GGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CAA 90 bp TGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTAGACACCATTTCATTCTaGCCAAATTCGGTCCACCCC +
Preference number: 3 (lower is better)
Translates to: CSEATIPGNQRRGAFPDVDTISF*PNSVHP
Trigger: GGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTC...TACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CAA 90 bp ATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACGCCCAAATGTCAGATTaGCTGCTGAACTTGCTATAC +
Preference number: 3 (lower is better)
Translates to: ISFLPNSVHPHTHTPKLYAQMSD*LLNLLY
Trigger: GTATAGCAAGTTCAGCAGCAAATCTGACATTTGGGC...GTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618050.4
3UTR-3UTR CAA 90 bp AGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAAGGCACAATAATTTCTaGGCCTTTGCTCAGAAGCCA +
Preference number: 3 (lower is better)
Translates to: RCIPRCREGPFCIEWEHKRHNNF*AFAQKP
Trigger: TGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCT...TTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR-3UTR CAA 90 bp CGGGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCGAACCAAGAAGCTTATaGGCGAGCTCAGGATTCTTC +
Preference number: 3 (lower is better)
Translates to: REISGTIISWPLLRSHYPEPRSL*ASSGFF
Trigger: GAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTTC...GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618050.4
3UTR GCA 72 bp CTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTaGATTCCCAGATGTAGAGAGGGGCCTTTTTGTATT +
Preference number: 3 (lower is better)
Translates to: LRSHYPRESKKR*IPRCREGPFCI
Trigger: AATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTAATCTCTAGCAGCTGCTaGGTCTGGAAGCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: CQIRSTPTHTPPSSTKCLISSSC*VWKRWR
Trigger: GCGCCACCGCTTCCAGACTCAGCAGCTGCTAGAGAT...TAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGATCTCTAGCAGCTGCTaGGTCTGGAAGCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: WEHKGSRAPKLGISSEKVISSSC*VWKRWR
Trigger: GCGCCACCGCTTCCAGACTCAGCAGCTGCTAGAGAT...CACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp GCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGACTTGTGGAGACTGGTaGTGCTGCTGGCTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: AFAQKPLSQGIKEEVHSQTCGDW*CCWLRR
Trigger: CCGCCTGAGCCAGCAGCAGCACCAGTCTCCACAAGT...CTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGTGGGGCGCTGCTTGGTaGAGACGCCATACAACTGCA +
Preference number: 4 (lower is better)
Translates to: FLPNSVHPHTHTPKLYQMWGAAW*RRHTTA
Trigger: TGCAGTTGTATGGCGTCTGCACCAAGCAGCGCCCCA...CATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGCCAGGACTTGGAAGGTaGGACTCGATCGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SGSTKAPGLLSLGFPLRKPGLGR*DSIAAD
Trigger: GTCTGCTGCGATCGAGTCCCACCTTCCAAGTCCTGG...CTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000372880.5
CDS-3UTR CCA 90 bp GCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTACGGCTTTTTCAAGATCTaGTCCTCCTCAGGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: AKFGPPPHTHPQALPNAYGFFKI*SSSGVG
Trigger: CCCAACGCCTGAGGAGGACCAGATCTTGAAAAAGCC...GTAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp GCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTACATGGCCACGTCGTACTaGCCTCTCCATTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: AKFGPPPHTHPQALPNAYMATSY*PLHFPY
Trigger: GTATGGGAAATGGAGAGGCCAGTACGACGTGGCCAT...GTAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp CCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCTCCTGCTGCCAGGTCTCGGTaGAGGAACTGCTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: PTQRAVGPLCAAIYILPPAARSR*RNCFDS
Trigger: GGAGTCAAAGCAGTTCCTTCACCGAGACCTGGCAGC...AGGAGGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACTTGTGGAGACTGGTaGTGCTGCTGGCTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RRGAFPDVERGLFVLSGSTCGDW*CCWLRR
Trigger: CCGCCTGAGCCAGCAGCAGCACCAGTCTCCACAAGT...GCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR CAA 72 bp GGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATaGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: GAFPDVERGLFV*SGSTKAPGLLS
Trigger: GCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR CAA 72 bp ACCCTCCCCTCCCATCTTTATGACACCATTTCATTCTaGCCAAATTCGGTCCACCCCCACACACACACCCCC +
Preference number: 4 (lower is better)
Translates to: TLPSHLYDTISF*PNSVHPHTHTP
Trigger: GGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATAAAGATGGGAGGGGAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGAGCAGTTGCTCAGCCTaGCTCCGAGTCATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: FLPNSVHPHTHTPKLYQMSSCSA*LRVMCL
Trigger: CAAACACATGACTCGGAGTCAGGCTGAGCAACTGCT...CATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp GCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTACCCCCTCCCATCTTTATaGCACCATTTCATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: AKFGPPPHTHPQALPNAYPLPSL*HHFILA
Trigger: GGCAAGAATGAAATGGTGTCATAAAGATGGGAGGGG...GTAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTACAGACTCACACAGCCTaGAAATGTGGTAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CQIRSTPTHTPPSSTKCLQTHTA*KCGSSS
Trigger: GGAAGAGCTACCACATTTTCAGGCTGTGTGAGTCTG...TAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS-3UTR TCA 90 bp AGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCACTGCTCCCTTCACTaGACGCCACTACGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SHYPRESKKRCIPRCREGHCSLH*TPLRSR
Trigger: TCTGCTACGTAGTGGCGTTCAGTGAAGGGAGCAGTG...CCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS-3UTR GCA 90 bp AGCTCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACTTGTGGAGACTGGTaGTGCTGCTGGCTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SSTKCLLKELLDPFVRLFTCGDW*CCWLRR
Trigger: CCGCCTGAGCCAGCAGCAGCACCAGTCTCCACAAGT...AAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCTGGGGCGCTGCTTGGTaGAGACGCCATACAACTGCA +
Preference number: 4 (lower is better)
Translates to: RRGAFPDVERGLFVLSGSWGAAW*RRHTTA
Trigger: TGCAGTTGTATGGCGTCTGCACCAAGCAGCGCCCCA...GCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGATGAAGATGGGGCGCTaGTTGGTGCAGACGCCATAC +
Preference number: 4 (lower is better)
Translates to: SHYPRESKKRCIPRCREGMKMGR*LVQTPY
Trigger: GTATGGCGTCTGCACCAAGCAGCGCCCCATCTTCAT...CCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAATTGGGGCATCAGGACTTCCGGTaGGGACCACCGGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: KGSRAPKLGISSEKVKLGHQDFR*GPPDWK
Trigger: TTTCCAGTCCGGTGGTCCCCACCGGAAGTCCTGATG...CCCCAATTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000621635.4
CDS-3UTR CCA 90 bp TGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCCATCAGGACTTCCGGTaGGGACCACCGGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: CIPRCREGPFCIEWEHKGHQDFR*GPPDWK
Trigger: TTTCCAGTCCGGTGGTCCCCACCGGAAGTCCTGATG...GCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000621635.4
CDS-3UTR CCA 90 bp AATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCCATCAGGACTTCCGGTaGGGACCACCGGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: NAYSKSCWTPLCGYLHPPHQDFR*GPPDWK
Trigger: TTTCCAGTCCGGTGGTCCCCACCGGAAGTCCTGATG...GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000621635.4
CDS-3UTR TCA 90 bp CATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAAGCATTTTTGGCTGTCTaGGAGCAGCAGAGATACTGC +
Preference number: 4 (lower is better)
Translates to: HSCQIRSTPTHTPPSSTKAFLAV*EQQRYC
Trigger: GCAGTATCTCTGCTGCTCTCAGACAGCCAAAAATGC...TTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp CCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTGCTCAGGGATGGTGCTaGAAAGGTGCTTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PFCIEWEHKGSRAPKLGIAQGWC*KGASQP
Trigger: TGGCTGAGAAGCACCTTTTCAGCACCATCCCTGAGC...AATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp CGGGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCATCTCTAGCAGCTGCTaGGTCTGGAAGCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: REISGTIISWPLLRSHYPISSSC*VWKRWR
Trigger: GCGCCACCGCTTCCAGACTCAGCAGCTGCTAGAGAT...GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTAGCTTGGGATTTCCTCTaGGAAAGTGAAATTGGGGCT +
Preference number: 4 (lower is better)
Translates to: CQIRSTPTHTPPSSTKCLAWDFL*ESEIGA
Trigger: AGCCCCAATTTCACTTTCTCAGAGGAAATCCCAAGC...TAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTACCCCTCCCATCTTTATaGCACCATTTCATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: CQIRSTPTHTPPSSTKCLPLPSL*HHFILA
Trigger: GGCAAGAATGAAATGGTGTCATAAAGATGGGAGGGG...TAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp CCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCTCCTAGAGGAAGGACAGTCTaGGCAAACCCCACCCTTTCA +
Preference number: 4 (lower is better)
Translates to: PTQRAVGPLCAAIYILPPRGRTV*ANPTLS
Trigger: TGAAAGGGTGGGGTTTGCTCAGACTGTCCTTCCTCT...AGGAGGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS-3UTR GCA 90 bp TCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACAACTTGTGGAGACTGGTaGTGCTGCTGGCTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: STKCLLKELLDPFVRLFTTCGDW*CCWLRR
Trigger: CCGCCTGAGCCAGCAGCAGCACCAGTCTCCACAAGT...TGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGCCTTCTTTCCCCTCTTaGTTTAGCAGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WEHKGSRAPKLGISSEKVPSFPS*FSSCSA
Trigger: GGCTGAGCAACTGCTAAAGCAAGAGGGGAAAGAAGG...CACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp CATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGTTGGACCCCTTTGTaGGGCTATTTACATCCTCCC +
Preference number: 4 (lower is better)
Translates to: HSCQIRSTPTHTPPSSTKCWTPL*GYLHPP
Trigger: GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACA...TTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp GCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTACCCAAGCTCTACCAAATaGCTACTCAAAGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: AKFGPPPHTHPQALPNAYPSSTK*LLKELL
Trigger: CAACAGCTCTTTGAGTAGGCATTTGGTAGAGCTTGG...GTAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp TATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCGGCTTTTTCAAGATCTaGTCCTCCTCAGGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: YDTISFLPNSVHPHTHTPGFFKI*SSSGVG
Trigger: CCCAACGCCTGAGGAGGACCAGATCTTGAAAAAGCC...GGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp ATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGTTTTCAGCTCACTTGTaGAGACTGGTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: IEWEHKGSRAPKLGISSEFSAHL*RLVLLL
Trigger: CAGCAGCAGCACCAGTCTCCACAAGTGAGCTGAAAA...CTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp ATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGATGGGGCGCTGCTTaGTGCAGACGCCATACAACT +
Preference number: 4 (lower is better)
Translates to: IPRCREGPFCIEWEHKGSRWGAA*CRRHTT
Trigger: AGTTGTATGGCGTCTGCACCAAGCAGCGCCCCATCT...GGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCGCTTCCCAGATGCATTaGGATGCCAGGACTTGGAAG +
Preference number: 4 (lower is better)
Translates to: NAYSKSCWTPLCGYLHPPASQMH*DARTWK
Trigger: CTTCCAAGTCCTGGCATCTCAATGCATCTGGGAAGC...GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000372880.5
CDS-3UTR TCA 90 bp CATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAAACGTTTTTGAGCTGGTaGATCCACCGCTTCCTTAGT +
Preference number: 4 (lower is better)
Translates to: HSCQIRSTPTHTPPSSTKTFLSW*IHRFLS
Trigger: ACTAAGGAAGCGGTGGATTCACCAGCTCAAAAACGT...TTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGACGTTTTTGAGCTGGTaGATCCACCGCTTCCTTAGT +
Preference number: 4 (lower is better)
Translates to: FLPNSVHPHTHTPKLYQMTFLSW*IHRFLS
Trigger: ACTAAGGAAGCGGTGGATTCACCAGCTCAAAAACGT...CATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TTTATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCGCTCAGGGATGGTGCTaGAAAGGTGCTTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: FMTPFHSCQIRSTPTHTPAQGWC*KGASQP
Trigger: TGGCTGAGAAGCACCTTTTCAGCACCATCCCTGAGC...GGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGGGTATATACCTTCTCTaGAGCCAGATGAGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: WEHKGSRAPKLGISSEKVGIYLL*SQMRPV
Trigger: TACAGGCCTCATCTGGCTTCAGAGAAGGTATATACC...CACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp GAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGTATATACCTTCTCTaGAGCCAGATGAGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: EGPFCIEWEHKGSRAPKLGIYLL*SQMRPV
Trigger: TACAGGCCTCATCTGGCTTCAGAGAAGGTATATACC...AAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCGGGGCCTTTTTGTATTaGGTGGGAGCACAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: NAYSKSCWTPLCGYLHPPGAFLY*VGAQRL
Trigger: GAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCC...GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAATTGGGGGGGGCCTTTTTGTATTaGGTGGGAGCACAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: KGSRAPKLGISSEKVKLGGAFLY*VGAQRL
Trigger: GAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCC...CCCCAATTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTT
51% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCGGGGCCTTTTTGTATTaGGTGGGAGCACAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: RRGAFPDVERGLFVLSGSGAFLY*VGAQRL
Trigger: GAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCC...GCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGCCCCTCCCATCTTTATaGCACCATTTCATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: WEHKGSRAPKLGISSEKVPLPSL*HHFILA
Trigger: GGCAAGAATGAAATGGTGTCATAAAGATGGGAGGGG...CACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGGCCATGTGATAGATaGACTGGAACAATTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SGSTKAPGLLSLGFPLRKWPCDR*TGTIGS
Trigger: GGAGCCAATTGTTCCAGTTCATCTATCACATGGCCA...CTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS-3UTR GCA 90 bp AGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGATCGCTTCAGAAAGATaGTCTCCAGAATCACTGCGG +
Preference number: 4 (lower is better)
Translates to: SGSTKAPGLLSLGFPLRKIASER*SPESLR
Trigger: CCGCAGTGATTCTGGAGAGCATCTTTCTGAAGCGAT...CTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp CCAGATGAGGCCTGTAGAGACGTAGGCCTTGGGCAATGTGTTCAGCAGTCTCACTTGAACCCTTCTTACTaGCTCTTCTCCCACGTTCAA +
Preference number: 4 (lower is better)
Translates to: PDEACRDVGLGQCVQQSHLNPSY*LFSHVQ
Trigger: TTGAACGTGGGAGAAGAGGCAGTAAGAAGGGTTCAA...GTGAGACTGCTGAACACATTGCCCAAGGCCTACGTCTCTACAGGCCTCATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR GCA 90 bp TGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTATTGAACCCTTCTTACTaGCTCTTCTCCCACGTTCAA +
Preference number: 4 (lower is better)
Translates to: CQIRSTPTHTPPSSTKCLLNPSY*LFSHVQ
Trigger: TTGAACGTGGGAGAAGAGGCAGTAAGAAGGGTTCAA...TAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGGAGCAGCAGAGATACTaGCCATCGATCCAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SHYPRESKKRCIPRCREGEQQRY*PSIQKQ
Trigger: TTGCTTCTGGATCGATGGGCAGTATCTCTGCTGCTC...CCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCGAGCAGCAGAGATACTaGCCATCGATCCAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: YDTISFLPNSVHPHTHTPEQQRY*PSIQKQ
Trigger: TTGCTTCTGGATCGATGGGCAGTATCTCTGCTGCTC...GGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTCTTTCCCCTCTTaGTTTAGCAGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SHYPRESKKRCIPRCREGPSFPS*FSSCSA
Trigger: GGCTGAGCAACTGCTAAAGCAAGAGGGGAAAGAAGG...CCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCGTATCCCAGGCCTaGAGTGGAAGGTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: CIPRCREGPFCIEWEHKGSVSQA*SGRCIL
Trigger: AAGAATGCACCTTCCACTGCAGGCCTGGGATACGGA...GCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp ATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAGACGCCATACAACTaGACCAGCTTCTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: ISFLPNSVHPHTHTPKLYQTPYN*TSFSWE
Trigger: TTCCCATGAGAAGCTGGTGCAGTTGTATGGCGTCTG...GTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCATGAAGATGGGGCGCTaGTTGGTGCAGACGCCATAC +
Preference number: 4 (lower is better)
Translates to: KCLLKELLDPFVRLFTSSMKMGR*LVQTPY
Trigger: GTATGGCGTCTGCACCAAGCAGCGCCCCATCTTCAT...GGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp CCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCTCCTTTTTCAGCTCACTTGTaGAGACTGGTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PTQRAVGPLCAAIYILPPFSAHL*RLVLLL
Trigger: CAGCAGCAGCACCAGTCTCCACAAGTGAGCTGAAAA...AGGAGGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp TGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTAACTGGCTCTGAGGTGTaGAACACACAACATAATGAC +
Preference number: 4 (lower is better)
Translates to: CQIRSTPTHTPPSSTKCLTGSEV*NTQHND
Trigger: GTCATTATGTTGTGTGTTCCACACCTCAGAGCCAGT...TAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp TTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAATGGCCACGTCGTACTaGCCTCTCCATTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: FPDVERGLFVLSGSTKAPMATSY*PLHFPY
Trigger: GTATGGGAAATGGAGAGGCCAGTACGACGTGGCCAT...TGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp GAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAAAACAGGAATGGAACGTaGAGGTGGAGGACCCCTTCA +
Preference number: 4 (lower is better)
Translates to: EHKGSRAPKLGISSEKVKNRNGT*RWRTPS
Trigger: TGAAGGGGTCCTCCACCTCCACGTTCCATTCCTGTT...TTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS-3UTR TCA 90 bp GAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAAACCGGATTACGTTTTTaGGCTGGTGAATCCACCGCT +
Preference number: 4 (lower is better)
Translates to: EHKGSRAPKLGISSEKVKTGLRF*AGESTA
Trigger: AGCGGTGGATTCACCAGCTCAAAAACGTAATCCGGT...TTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCGCATTTTTGGCTGTCTaGGAGCAGCAGAGATACTGC +
Preference number: 4 (lower is better)
Translates to: CIPRCREGPFCIEWEHKGAFLAV*EQQRYC
Trigger: GCAGTATCTCTGCTGCTCTCAGACAGCCAAAAATGC...GCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCGCATTTTTGGCTGTCTaGGAGCAGCAGAGATACTGC +
Preference number: 4 (lower is better)
Translates to: NAYSKSCWTPLCGYLHPPAFLAV*EQQRYC
Trigger: GCAGTATCTCTGCTGCTCTCAGACAGCCAAAAATGC...GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp CAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCAGTTGCTCAGCCTaGCTCCGAGTCATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: QRRGAFPDVERGLFVLSGSSCSA*LRVMCL
Trigger: CAAACACATGACTCGGAGTCAGGCTGAGCAACTGCT...CCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCGCTCAGGGATGGTGCTaGAAAGGTGCTTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: FRHNNFLAFAQKPLSQGIAQGWC*KGASQP
Trigger: TGGCTGAGAAGCACCTTTTCAGCACCATCCCTGAGC...GATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp GGCAATGTGTTCAGCAGTCTCACTGTTAGTAAATCTCTCATATGGCATCTTCCCGCTGCCAGGTCTCGGTaGAGGAACTGCTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: GNVFSSLTVSKSLIWHLPAARSR*RNCFDS
Trigger: GGAGTCAAAGCAGTTCCTTCACCGAGACCTGGCAGC...GGGAAGATGCCATATGAGAGATTTACTAACAGTGAGACTGCTGAACACATTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR TCA 90 bp ATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACGGTATATACCTTCTCTaGAGCCAGATGAGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: ISFLPNSVHPHTHTPKLYGIYLL*SQMRPV
Trigger: TACAGGCCTCATCTGGCTTCAGAGAAGGTATATACC...GTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp GCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGGGTATATACCTTCTCTaGAGCCAGATGAGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: AFAQKPLSQGIKEEVHSQGIYLL*SQMRPV
Trigger: TACAGGCCTCATCTGGCTTCAGAGAAGGTATATACC...CTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCCCTCCAGGTCTTCATTaGATTAGCAGTTTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: YDTISFLPNSVHPHTHTPPPGLH*ISSLLR
Trigger: TCGCAGCAAACTGCTAATTCAATGAAGACCTGGAGG...GGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS-3UTR GCA 90 bp AGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGGCTCTCCAGAATCACTaGGGCCATAGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SHYPRESKKRCIPRCREGALQNH*GHSFFF
Trigger: AAAGAAGAAGCTATGGCCGCAGTGATTCTGGAGAGC...CCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000621635.4
CDS-3UTR GCA 90 bp CCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCTCCTGCTCTCCAGAATCACTaGGGCCATAGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: PTQRAVGPLCAAIYILPPALQNH*GHSFFF
Trigger: AAAGAAGAAGCTATGGCCGCAGTGATTCTGGAGAGC...AGGAGGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000621635.4
CDS-3UTR GCA 90 bp AATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCGAGCAGCAGAGATACTaGCCATCGATCCAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: NAYSKSCWTPLCGYLHPPEQQRY*PSIQKQ
Trigger: TTGCTTCTGGATCGATGGGCAGTATCTCTGCTGCTC...GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCGAGCAGCAGAGATACTaGCCATCGATCCAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: RRGAFPDVERGLFVLSGSEQQRY*PSIQKQ
Trigger: TTGCTTCTGGATCGATGGGCAGTATCTCTGCTGCTC...GCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAATTGGGGCTTGTGGAGCCTTCTTTCCCCTCTTaGTTTAGCAGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RAPKLGISSEKVKLGLVEPSFPS*FSSCSA
Trigger: GGCTGAGCAACTGCTAAAGCAAGAGGGGAAAGAAGG...CTCCACAAGCCCCAATTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTATCCGTATCCCAGGCCTaGAGTGGAAGGTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: CSEATIPGNQRRGAFPDVSVSQA*SGRCIL
Trigger: AAGAATGCACCTTCCACTGCAGGCCTGGGATACGGA...TACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACAATGAAGATGGGGCGCTaGTTGGTGCAGACGCCATAC +
Preference number: 4 (lower is better)
Translates to: STKCLLKELLDPFVRLFTMKMGR*LVQTPY
Trigger: GTATGGCGTCTGCACCAAGCAGCGCCCCATCTTCAT...TGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp CAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTACTCTCATCTGCTTTCTCATaGCAGCAACTGTACATGATG +
Preference number: 4 (lower is better)
Translates to: QIRSTPTHTPPSSTKCLLSSAFS*QQLYMM
Trigger: CATCATGTACAGTTGCTGGCATGAGAAAGCAGATGA...GAGTAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp GAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAAAGTGGGACGCTCATCTaGTTTCTCATGCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: EHKGSRAPKLGISSEKVKSGTLI*FLMPAT
Trigger: AGTTGCTGGCATGAGAAAGCAGATGAGCGTCCCACT...TTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCAGTGGGACGCTCATCTaGTTTCTCATGCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: RRGAFPDVERGLFVLSGSSGTLI*FLMPAT
Trigger: AGTTGCTGGCATGAGAAAGCAGATGAGCGTCCCACT...GCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCTGTTGGACCCCTTTGTaGGGCTATTTACATCCTCCC +
Preference number: 4 (lower is better)
Translates to: RRGAFPDVERGLFVLSGSCWTPL*GYLHPP
Trigger: GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACA...GCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGCCAAGCTCTACCAAATaGCTACTCAAAGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: WEHKGSRAPKLGISSEKVPSSTK*LLKELL
Trigger: CAACAGCTCTTTGAGTAGGCATTTGGTAGAGCTTGG...CACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCCCCCGGAACAGTGCCTaGCACATAATGGGCATCCAA +
Preference number: 4 (lower is better)
Translates to: FRHNNFLAFAQKPLSQGIPRNSA*HIMGIQ
Trigger: TTGGATGCCCATTATGTGGCAGGCACTGTTCCGGGG...GATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS-3UTR CCA 90 bp TTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGTTTGCTCCATTTCACTaGACTCTTCACCTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: FLPNSVHPHTHTPKLYQMFAPFH*TLHLFS
Trigger: CGAGAAGAGGTGAAGAGTCCAGTGAAATGGAGCAAA...CATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTTTGCTCCATTTCACTaGACTCTTCACCTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SGSTKAPGLLSLGFPLRKFAPFH*TLHLFS
Trigger: CGAGAAGAGGTGAAGAGTCCAGTGAAATGGAGCAAA...CTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCTTTTCAGCTCACTTGTaGAGACTGGTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NAYSKSCWTPLCGYLHPPFSAHL*RLVLLL
Trigger: CAGCAGCAGCACCAGTCTCCACAAGTGAGCTGAAAA...GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp TGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTAAATGGAACGTGGAGGTaGAGGACCCCTTCATTCGAC +
Preference number: 4 (lower is better)
Translates to: CSEATIPGNQRRGAFPDVNGTWR*RTPSFD
Trigger: GTCGAATGAAGGGGTCCTCCACCTCCACGTTCCATT...TACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS-3UTR CCA 90 bp GGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGACATCAGGATTCCGGTaGGGACCACCGGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: GTIISWPLLRSHYPRESKTSGFR*GPPDWK
Trigger: TTTCCAGTCCGGTGGTCCCCACCGGAATCCTGATGT...CTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR TCA 90 bp TTTATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCTGTGTGCTCAGTCCTaGCTTAATGCAGGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: FMTPFHSCQIRSTPTHTPLCAQS*LNAGSF
Trigger: GAAGCTACCTGCATTAAGTCAGGACTGAGCACACAG...GGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308731.8
CDS-3UTR TCA 90 bp AAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAATTGGGGACGTTTTTGAGCTGGTaGATCCACCGCTTCCTTAGT +
Preference number: 4 (lower is better)
Translates to: KGSRAPKLGISSEKVKLGTFLSW*IHRFLS
Trigger: ACTAAGGAAGCGGTGGATTCACCAGCTCAAAAACGT...CCCCAATTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TTTATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCACCGGATTACGTTTTTaGGCTGGTGAATCCACCGCT +
Preference number: 4 (lower is better)
Translates to: FMTPFHSCQIRSTPTHTPTGLRF*AGESTA
Trigger: AGCGGTGGATTCACCAGCTCAAAAACGTAATCCGGT...GGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp CTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATAGCAGTTGCTCAGCCTaGCTCCGAGTCATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: LPNAYSKSCWTPLCGYLHSSCSA*LRVMCL
Trigger: CAAACACATGACTCGGAGTCAGGCTGAGCAACTGCT...ATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGTGAAGGAACTGCTTTaGCTCCAGGTATTCCATGGC +
Preference number: 4 (lower is better)
Translates to: RCIPRCREGPFCIEWEHKVKELL*LQVFHG
Trigger: GCCATGGAATACCTGGAGTCAAAGCAGTTCCTTCAC...TTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TTTATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCGTGAAGGAACTGCTTTaGCTCCAGGTATTCCATGGC +
Preference number: 4 (lower is better)
Translates to: FMTPFHSCQIRSTPTHTPVKELL*LQVFHG
Trigger: GCCATGGAATACCTGGAGTCAAAGCAGTTCCTTCAC...GGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp CAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTACTCAAATTTGGAGCCTACTaGGCTTGTGTATTCATCATC +
Preference number: 4 (lower is better)
Translates to: QIRSTPTHTPPSSTKCLLKFGAY*ACVFII
Trigger: GATGATGAATACACAAGCTCAGTAGGCTCCAAATTT...GAGTAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp GAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTTGTCAGATTTGCTGCTaGACTTGCTATACATCAGGA +
Preference number: 4 (lower is better)
Translates to: EGPFCIEWEHKGSRAPKLCQICC*TCYTSG
Trigger: TCCTGATGTATAGCAAGTTCAGCAGCAAATCTGACA...AAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGTGTCAGATTTGCTGCTaGACTTGCTATACATCAGGA +
Preference number: 4 (lower is better)
Translates to: WEHKGSRAPKLGISSEKVCQICC*TCYTSG
Trigger: TCCTGATGTATAGCAAGTTCAGCAGCAAATCTGACA...CACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCTTCTCCTGTTTCTTATaGTCCAGTCCAGACTCACAC +
Preference number: 4 (lower is better)
Translates to: YDTISFLPNSVHPHTHTPFSCFL*SSPDSH
Trigger: GTGTGAGTCTGGACTGGATCATAAGAAACAGGAGAA...GGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS-3UTR GCA 90 bp CAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGCCTTCTTTCCCCTCTTaGTTTAGCAGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QRRGAFPDVERGLFVLSGPSFPS*FSSCSA
Trigger: GGCTGAGCAACTGCTAAAGCAAGAGGGGAAAGAAGG...CCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCAGACACTGTATATTTaGCAGCTTTGCTGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SHYPRESKKRCIPRCREGQTLYI*QLCWSL
Trigger: GAGACTCCAGCAAAGCTGGCAAATATACAGTGTCTG...CCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp GAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAACCTGGATATGAGTCCTaGAGAGTTGTGCTGATGGTA +
Preference number: 4 (lower is better)
Translates to: EHKGSRAPKLGISSEKVKPGYES*RVVLMV
Trigger: TACCATCAGCACAACTCTGCAGGACTCATATCCAGG...TTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTTGGGGCGCTGCTTGGTaGAGACGCCATACAACTGCA +
Preference number: 4 (lower is better)
Translates to: NQRRGAFPDVERGLFVLSWGAAW*RRHTTA
Trigger: TGCAGTTGTATGGCGTCTGCACCAAGCAGCGCCCCA...ACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp GAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAACTTCACAGACATCCTTaGACATCTCTAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EHKGSRAPKLGISSEKVKLHRHP*TSLAAA
Trigger: AGCAGCTGCTAGAGATGTGCAAGGATGTCTGTGAAG...TTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp CAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGGATCGCAGCAGACACTaGCCCTGGAGACATATTCTT +
Preference number: 4 (lower is better)
Translates to: QRRGAFPDVERGLFVLSGDRSRH*PWRHIL
Trigger: AAGAATATGTCTCCAGGGCCAGTGTCTGCTGCGATC...CCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000372880.5
CDS-3UTR CCA 90 bp CGGGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCGGCTTTTTCAAGATCTaGTCCTCCTCAGGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: REISGTIISWPLLRSHYPGFFKI*SSSGVG
Trigger: CCCAACGCCTGAGGAGGACCAGATCTTGAAAAAGCC...GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp ATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACACTGGCTCTGAGGTGTaGAACACACAACATAATGAC +
Preference number: 4 (lower is better)
Translates to: ISFLPNSVHPHTHTPKLYTGSEV*NTQHND
Trigger: GTCATTATGTTGTGTGTTCCACACCTCAGAGCCAGT...GTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp GAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGAGATGGGGCGCTGCTTaGTGCAGACGCCATACAACT +
Preference number: 4 (lower is better)
Translates to: EISGTIISWPLLRSHYPRRWGAA*CRRHTT
Trigger: AGTTGTATGGCGTCTGCACCAAGCAGCGCCCCATCT...CCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp ATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCACCGGACTGGAAATTTaGAGCCTACTGAGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: IPRCREGPFCIEWEHKGSTGLEI*SLLSLC
Trigger: ACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGT...GGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp GAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTAACCAAGAAGCTTATTaGCGAGCTCAGGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: EGPFCIEWEHKGSRAPKLNQEAY*RAQDSS
Trigger: TGAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTT...AAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCTACTCAAAGAGCTGTTaGACCCCTTTGTGCGGCTAT +
Preference number: 4 (lower is better)
Translates to: NAYSKSCWTPLCGYLHPPYSKSC*TPLCGY
Trigger: ATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTA...GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp CTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCAGTGACCTTGAGGTaGAACAGGAATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: LPNAYSKSCWTPLCGYLHPVTLR*NRNGTW
Trigger: CCACGTTCCATTCCTGTTCCACCTCAAGGTCACTGG...ATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS-3UTR TCA 90 bp CAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTACTCCTGTTTCAACACAAGTaGTCTTCTCAACATCTATTG +
Preference number: 4 (lower is better)
Translates to: QIRSTPTHTPPSSTKCLLLFQHK*SSQHLL
Trigger: CAATAGATGTTGAGAAGATCACTTGTGTTGAAACAG...GAGTAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp CAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGACGTTTTTGAGCTGGTaGATCCACCGCTTCCTTAGT +
Preference number: 4 (lower is better)
Translates to: QRRGAFPDVERGLFVLSGTFLSW*IHRFLS
Trigger: ACTAAGGAAGCGGTGGATTCACCAGCTCAAAAACGT...CCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCACCGGATTACGTTTTTaGGCTGGTGAATCCACCGCT +
Preference number: 4 (lower is better)
Translates to: FRHNNFLAFAQKPLSQGITGLRF*AGESTA
Trigger: AGCGGTGGATTCACCAGCTCAAAAACGTAATCCGGT...GATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp GGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGAGCAGTTGCTCAGCCTaGCTCCGAGTCATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: GNFRHNNFLAFAQKPLSQSSCSA*LRVMCL
Trigger: CAAACACATGACTCGGAGTCAGGCTGAGCAACTGCT...CTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGAAATTTGGAGCCTACTaGGCTTGTGTATTCATCATC +
Preference number: 4 (lower is better)
Translates to: FLPNSVHPHTHTPKLYQMKFGAY*ACVFII
Trigger: GATGATGAATACACAAGCTCAGTAGGCTCCAAATTT...CATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGCCAGCAACTGTACATaGTGGTATATACCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FPDVERGLFVLSGSTKAPASNCT*WYIPSL
Trigger: CAGAGAAGGTATATACCATCATGTACAGTTGCTGGC...TGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCGCCAGCAACTGTACATaGTGGTATATACCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NAYSKSCWTPLCGYLHPPASNCT*WYIPSL
Trigger: CAGAGAAGGTATATACCATCATGTACAGTTGCTGGC...GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCATGCTCAGAAGAATTTTaGAAGTGGGACGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: FPDVERGLFVLSGSTKAPCSEEF*KWDAHL
Trigger: CAGATGAGCGTCCCACTTTCAAAATTCTTCTGAGCA...TGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp CAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTACTCAGGATTCTTCATCCATaGCATCTAGAATATTGCTCA +
Preference number: 4 (lower is better)
Translates to: QIRSTPTHTPPSSTKCLLRILHP*HLEYCS
Trigger: TGAGCAATATTCTAGATGTCATGGATGAAGAATCCT...GAGTAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp CAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGGCTTGGGATTTCCTCTaGGAAAGTGAAATTGGGGCT +
Preference number: 4 (lower is better)
Translates to: QRRGAFPDVERGLFVLSGAWDFL*ESEIGA
Trigger: AGCCCCAATTTCACTTTCTCAGAGGAAATCCCAAGC...CCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp GGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGGGCCTTTTTGTATTaGGTGGGAGCACAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GNFRHNNFLAFAQKPLSQGAFLY*VGAQRL
Trigger: GAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCC...CTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCCACAGCTCTCAGTCCTaGCTTAATGCAGGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: FRHNNFLAFAQKPLSQGIHSSQS*LNAGSF
Trigger: GAAGCTACCTGCATTAAGTCAGGACTGAGAGCTGTG...GATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS-3UTR TCA 90 bp AGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCAAAGGGATCCATTTTTaGGTCCTCCAGAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: RRGAFPDVERGLFVLSGSKGIHF*VLQKVG
Trigger: ACCAACCTTCTGGAGGACTCAAAAATGGATCCCTTT...GCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS-3UTR GCA 90 bp AGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAATCGCTTCAGAAAGATaGTCTCCAGAATCACTGCGG +
Preference number: 4 (lower is better)
Translates to: RCIPRCREGPFCIEWEHKIASER*SPESLR
Trigger: CCGCAGTGATTCTGGAGAGCATCTTTCTGAAGCGAT...TTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp ATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCTTGAACCCTTCTTACTaGCTCTTCTCCCACGTTCAA +
Preference number: 4 (lower is better)
Translates to: IPRCREGPFCIEWEHKGSLNPSY*LFSHVQ
Trigger: TTGAACGTGGGAGAAGAGGCAGTAAGAAGGGTTCAA...GGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp ATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCCAGACACTGTATATTTaGCAGCTTTGCTGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: IPRCREGPFCIEWEHKGSQTLYI*QLCWSL
Trigger: GAGACTCCAGCAAAGCTGGCAAATATACAGTGTCTG...GGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCCTGGATATGAGTCCTaGAGAGTTGTGCTGATGGTA +
Preference number: 4 (lower is better)
Translates to: KKRCIPRCREGPFCIEWEPGYES*RVVLMV
Trigger: TACCATCAGCACAACTCTGCAGGACTCATATCCAGG...CTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp CTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCAGACGCCATACAACTaGACCAGCTTCTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: LPNAYSKSCWTPLCGYLHQTPYN*TSFSWE
Trigger: TTCCCATGAGAAGCTGGTGCAGTTGTATGGCGTCTG...ATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCACTTCACAGACATCCTTaGACATCTCTAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FLGLCSEATIPGNQRRGALHRHP*TSLAAA
Trigger: AGCAGCTGCTAGAGATGTGCAAGGATGTCTGTGAAG...TGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCTTCACAGACATCCTTaGACATCTCTAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KKRCIPRCREGPFCIEWELHRHP*TSLAAA
Trigger: AGCAGCTGCTAGAGATGTGCAAGGATGTCTGTGAAG...CTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp CTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATAGTGGGACGCTCATCTaGTTTCTCATGCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: LPNAYSKSCWTPLCGYLHSGTLI*FLMPAT
Trigger: AGTTGCTGGCATGAGAAAGCAGATGAGCGTCCCACT...ATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACAAGTGGGACGCTCATCTaGTTTCTCATGCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: STKCLLKELLDPFVRLFTSGTLI*FLMPAT
Trigger: AGTTGCTGGCATGAGAAAGCAGATGAGCGTCCCACT...TGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp GCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGGAATCAAAGAAGAGGTaGATTCCCAGATGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: AFAQKPLSQGIKEEVHSQESKKR*IPRCRE
Trigger: CTCTCTACATCTGGGAATGCACCTCTTCTTTGATTC...CTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp CGGGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCTGTTGGACCCCTTTGTaGGGCTATTTACATCCTCCC +
Preference number: 4 (lower is better)
Translates to: REISGTIISWPLLRSHYPCWTPL*GYLHPP
Trigger: GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACA...GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp CCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTCCAAGCTCTACCAAATaGCTACTCAAAGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PFCIEWEHKGSRAPKLGIPSSTK*LLKELL
Trigger: CAACAGCTCTTTGAGTAGGCATTTGGTAGAGCTTGG...AATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp TTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTAGCAGACACTGGCCCTaGAGACATATTCTTACAGTC +
Preference number: 4 (lower is better)
Translates to: LLRSHYPRESKKRCIPRCSRHWP*RHILTV
Trigger: GACTGTAAGAATATGTCTCCAGGGCCAGTGTCTGCT...ACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000372880.5
CDS-3UTR CCA 90 bp CTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATGATCGCAGCAGACACTaGCCCTGGAGACATATTCTT +
Preference number: 4 (lower is better)
Translates to: LPNAYSKSCWTPLCGYLHDRSRH*PWRHIL
Trigger: AAGAATATGTCTCCAGGGCCAGTGTCTGCTGCGATC...ATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000372880.5
CDS-3UTR CCA 90 bp GGCAATGTGTTCAGCAGTCTCACTGTTAGTAAATCTCTCATATGGCATCTTCCCGGCTTTTTCAAGATCTaGTCCTCCTCAGGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: GNVFSSLTVSKSLIWHLPGFFKI*SSSGVG
Trigger: CCCAACGCCTGAGGAGGACCAGATCTTGAAAAAGCC...GGGAAGATGCCATATGAGAGATTTACTAACAGTGAGACTGCTGAACACATTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR CCA 90 bp AGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACTGGCTCTGAGGTGTaGAACACACAACATAATGAC +
Preference number: 4 (lower is better)
Translates to: RRGAFPDVERGLFVLSGSTGSEV*NTQHND
Trigger: GTCATTATGTTGTGTGTTCCACACCTCAGAGCCAGT...GCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp TTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTCATCCAGGACATACCTaGACAGGCCGAAATCAGATA +
Preference number: 4 (lower is better)
Translates to: LLRSHYPRESKKRCIPRCHPGHT*TGRNQI
Trigger: TATCTGATTTCGGCCTGTCCAGGTATGTCCTGGATG...ACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp TTTATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCATCCAGGACATACCTaGACAGGCCGAAATCAGATA +
Preference number: 4 (lower is better)
Translates to: FMTPFHSCQIRSTPTHTPHPGHT*TGRNQI
Trigger: TATCTGATTTCGGCCTGTCCAGGTATGTCCTGGATG...GGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp TTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTACCGGACTGGAAATTTaGAGCCTACTGAGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LLRSHYPRESKKRCIPRCTGLEI*SLLSLC
Trigger: ACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGT...ACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp CAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGACCGGACTGGAAATTTaGAGCCTACTGAGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: QRRGAFPDVERGLFVLSGTGLEI*SLLSLC
Trigger: ACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGT...CCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAATTGGGGGGCACAATAATTTCTTaGCCTTTGCTCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: KGSRAPKLGISSEKVKLGGTIIS*PLLRSH
Trigger: GTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCC...CCCCAATTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AGCTCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTTACTCAAAGAGCTGTTaGACCCCTTTGTGCGGCTAT +
Preference number: 4 (lower is better)
Translates to: SSTKCLLKELLDPFVRLFYSKSC*TPLCGY
Trigger: ATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTA...AAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAAGTCCTCCAGAAGGTTaGTGTGTAACACACAGCTCT +
Preference number: 4 (lower is better)
Translates to: RCIPRCREGPFCIEWEHKSPPEG*CVTHSS
Trigger: AGAGCTGTGTGTTACACACCAACCTTCTGGAGGACT...TTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS-3UTR CCA 90 bp GGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAGGCCAGAGGATCTaGGAAAAACACTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GNFRHNNFLAFAQKPLSQGGQRI*EKHCSL
Trigger: AAGGGAGCAGTGTTTTTCCCAGATCCTCTGGCCTCC...CTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS-3UTR TCA 90 bp CACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGCTTCCCAGATGCATTaGGATGCCAGGACTTGGAAG +
Preference number: 4 (lower is better)
Translates to: HNNFLAFAQKPLSQGIKEASQMH*DARTWK
Trigger: CTTCCAAGTCCTGGCATCTCAATGCATCTGGGAAGC...TTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000372880.5
CDS-3UTR TCA 90 bp TGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCGAAACAGGCGCTTCTTaGAGTTTAGAGGTGATGTTT +
Preference number: 4 (lower is better)
Translates to: CIPRCREGPFCIEWEHKGETGAS*SLEVMF
Trigger: AAACATCACCTCTAAACTTCAAGAAGCGCCTGTTTC...GCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp GAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGGCATTTTTGGCTGTCTaGGAGCAGCAGAGATACTGC +
Preference number: 4 (lower is better)
Translates to: ESKKRCIPRCREGPFCIEAFLAV*EQQRYC
Trigger: GCAGTATCTCTGCTGCTCTCAGACAGCCAAAAATGC...CTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGTGCTCAGAAGAATTTTaGAAGTGGGACGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: KKRCIPRCREGPFCIEWECSEEF*KWDAHL
Trigger: CAGATGAGCGTCCCACTTTCAAAATTCTTCTGAGCA...CTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp GAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTAGGATTCTTCATCCATaGCATCTAGAATATTGCTCA +
Preference number: 4 (lower is better)
Translates to: EGPFCIEWEHKGSRAPKLRILHP*HLEYCS
Trigger: TGAGCAATATTCTAGATGTCATGGATGAAGAATCCT...AAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp GGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGGCTTGGGATTTCCTCTaGGAAAGTGAAATTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GTIISWPLLRSHYPRESKAWDFL*ESEIGA
Trigger: AGCCCCAATTTCACTTTCTCAGAGGAAATCCCAAGC...CTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCATCGCTTCAGAAAGATaGTCTCCAGAATCACTGCGG +
Preference number: 4 (lower is better)
Translates to: FRHNNFLAFAQKPLSQGIIASER*SPESLR
Trigger: CCGCAGTGATTCTGGAGAGCATCTTTCTGAAGCGAT...GATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTTTGAACCCTTCTTACTaGCTCTTCTCCCACGTTCAA +
Preference number: 4 (lower is better)
Translates to: LLRSHYPRESKKRCIPRCLNPSY*LFSHVQ
Trigger: TTGAACGTGGGAGAAGAGGCAGTAAGAAGGGTTCAA...ACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp CACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAATCCGTATCCCAGGCCTaGAGTGGAAGGTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: HNNFLAFAQKPLSQGIKESVSQA*SGRCIL
Trigger: AAGAATGCACCTTCCACTGCAGGCCTGGGATACGGA...TTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCTTTGCTCCATTTCACTaGACTCTTCACCTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: KCLLKELLDPFVRLFTSSFAPFH*TLHLFS
Trigger: CGAGAAGAGGTGAAGAGTCCAGTGAAATGGAGCAAA...GGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp CAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGTTTGCTCCATTTCACTaGACTCTTCACCTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: QRRGAFPDVERGLFVLSGFAPFH*TLHLFS
Trigger: CGAGAAGAGGTGAAGAGTCCAGTGAAATGGAGCAAA...CCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAACTGGCTCTGAGGTGTaGAACACACAACATAATGAC +
Preference number: 4 (lower is better)
Translates to: RCIPRCREGPFCIEWEHKTGSEV*NTQHND
Trigger: GTCATTATGTTGTGTGTTCCACACCTCAGAGCCAGT...TTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AATATTGCTCAGAAGAATTTTGAAAGTGGGACGCTCATCTGCTTTCTCATGCCAAGATGGGGCGCTGCTTaGTGCAGACGCCATACAACT +
Preference number: 4 (lower is better)
Translates to: NIAQKNFESGTLICFLMPRWGAA*CRRHTT
Trigger: AGTTGTATGGCGTCTGCACCAAGCAGCGCCCCATCT...TGGCATGAGAAAGCAGATGAGCGTCCCACTTTCAAAATTCTTCTGAGCAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR CCA 90 bp CCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTAACCAAGAAGCTTATTaGCGAGCTCAGGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: PFCIEWEHKGSRAPKLGINQEAY*RAQDSS
Trigger: TGAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTT...AATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp TTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAAACCAAGAAGCTTATTaGCGAGCTCAGGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: FPDVERGLFVLSGSTKAPNQEAY*RAQDSS
Trigger: TGAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTT...TGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCACAATAATTTCTTaGCCTTTGCTCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RCIPRCREGPFCIEWEHKGTIIS*PLLRSH
Trigger: GTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCC...TTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp CAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGGGCACAATAATTTCTTaGCCTTTGCTCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QRRGAFPDVERGLFVLSGGTIIS*PLLRSH
Trigger: GTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCC...CCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAATGAACTGGAACAATTaGCTCCCTCCAGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RCIPRCREGPFCIEWEHKMNWNN*LPPGLH
Trigger: ATGAAGACCTGGAGGGAGCCAATTGTTCCAGTTCAT...TTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS-3UTR TCA 90 bp AATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCGCATTCTTGTTTTGTTaGGACACTGGATATTTGAGC +
Preference number: 4 (lower is better)
Translates to: NAYSKSCWTPLCGYLHPPAFLFC*DTGYLS
Trigger: GCTCAAATATCCAGTGTCTCAACAAAACAAGAATGC...GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCGCATTCTTGTTTTGTTaGGACACTGGATATTTGAGC +
Preference number: 4 (lower is better)
Translates to: CIPRCREGPFCIEWEHKGAFLFC*DTGYLS
Trigger: GCTCAAATATCCAGTGTCTCAACAAAACAAGAATGC...GCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp CACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGTGAAGGAACTGCTTTaGCTCCAGGTATTCCATGGC +
Preference number: 4 (lower is better)
Translates to: HNNFLAFAQKPLSQGIKEVKELL*LQVFHG
Trigger: GCCATGGAATACCTGGAGTCAAAGCAGTTCCTTCAC...TTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTTGTCAGATTTGCTGCTaGACTTGCTATACATCAGGA +
Preference number: 4 (lower is better)
Translates to: LLRSHYPRESKKRCIPRCCQICC*TCYTSG
Trigger: TCCTGATGTATAGCAAGTTCAGCAGCAAATCTGACA...ACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACAGCCAGCAACTGTACATaGTGGTATATACCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: STKCLLKELLDPFVRLFTASNCT*WYIPSL
Trigger: CAGAGAAGGTATATACCATCATGTACAGTTGCTGGC...TGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp CGGGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCTTTCCTCTGAGAAAGTaGAATTGGGGCTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: REISGTIISWPLLRSHYPFPLRK*NWGLWR
Trigger: TCTCCACAAGCCCCAATTTCACTTTCTCAGAGGAAA...GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATTTCCTCTGAGAAAGTaGAATTGGGGCTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: STKCLLKELLDPFVRLFTFPLRK*NWGLWR
Trigger: TCTCCACAAGCCCCAATTTCACTTTCTCAGAGGAAA...TGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp GAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGCCCCTCCCATCTTTATaGCACCATTTCATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: ESKKRCIPRCREGPFCIEPLPSL*HHFILA
Trigger: GGCAAGAATGAAATGGTGTCATAAAGATGGGAGGGG...CTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCATCACTCAATAATGTaGAAGGAAAGGGATCCATTT +
Preference number: 4 (lower is better)
Translates to: SHYPRESKKRCIPRCREGHHSIM*KERDPF
Trigger: AAATGGATCCCTTTCCTTTCACATTATTGAGTGATG...CCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS-3UTR GCA 90 bp TTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGTCAATGATTGAAATTTaGTCCATTTCACTGGACTCT +
Preference number: 4 (lower is better)
Translates to: FLPNSVHPHTHTPKLYQMSMIEI*SISLDS
Trigger: AGAGTCCAGTGAAATGGAGCAAATTTCAATCATTGA...CATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AGCTCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTTCATCTGCTTTCTCATaGCAGCAACTGTACATGATG +
Preference number: 4 (lower is better)
Translates to: SSTKCLLKELLDPFVRLFSSAFS*QQLYMM
Trigger: CATCATGTACAGTTGCTGGCATGAGAAAGCAGATGA...AAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTAGAATCAAAGAAGAGGTaGATTCCCAGATGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: CSEATIPGNQRRGAFPDVESKKR*IPRCRE
Trigger: CTCTCTACATCTGGGAATGCACCTCTTCTTTGATTC...TACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TTTATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCGAATCAAAGAAGAGGTaGATTCCCAGATGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: FMTPFHSCQIRSTPTHTPESKKR*IPRCRE
Trigger: CTCTCTACATCTGGGAATGCACCTCTTCTTTGATTC...GGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAATGGAGTTCACCTGTGTaGTTCTTTGACTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RCIPRCREGPFCIEWEHKWSSPV*FFDCFS
Trigger: AGAAAAGCAGTCAAAGAAGCACACAGGTGAACTCCA...TTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS-3UTR CCA 90 bp GAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGCATCCAGGACATACCTaGACAGGCCGAAATCAGATA +
Preference number: 4 (lower is better)
Translates to: EISGTIISWPLLRSHYPRHPGHT*TGRNQI
Trigger: TATCTGATTTCGGCCTGTCCAGGTATGTCCTGGATG...CCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AGCTCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTAGTAAATCTCTCATATaGCATCTTCCCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: SSTKCLLKELLDPFVRLFSKSLI*HLPQGV
Trigger: TACTCCCTGGGGAAGATGCCATATGAGAGATTTACT...AAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGAGTAAATCTCTCATATaGCATCTTCCCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: KKRCIPRCREGPFCIEWESKSLI*HLPQGV
Trigger: TACTCCCTGGGGAAGATGCCATATGAGAGATTTACT...CTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp GGCAATGTGTTCAGCAGTCTCACTGTTAGTAAATCTCTCATATGGCATCTTCCCTACTCAAAGAGCTGTTaGACCCCTTTGTGCGGCTAT +
Preference number: 4 (lower is better)
Translates to: GNVFSSLTVSKSLIWHLPYSKSC*TPLCGY
Trigger: ATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTA...GGGAAGATGCCATATGAGAGATTTACTAACAGTGAGACTGCTGAACACATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR TCA 90 bp TTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCGAAACAGGCGCTTCTTaGAGTTTAGAGGTGATGTTT +
Preference number: 4 (lower is better)
Translates to: FRHNNFLAFAQKPLSQGIETGAS*SLEVMF
Trigger: AAACATCACCTCTAAACTTCAAGAAGCGCCTGTTTC...GATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AGCTCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTGCATTCTTGTTTTGTTaGGACACTGGATATTTGAGC +
Preference number: 4 (lower is better)
Translates to: SSTKCLLKELLDPFVRLFAFLFC*DTGYLS
Trigger: GCTCAAATATCCAGTGTCTCAACAAAACAAGAATGC...AAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AATATTTTCATCGCAAATTCAGTCTGTCTTAATTCTCTCGGGAAATTTCAGGCAGCTGCCAGGTCTCGGTaGAGGAACTGCTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: NIFIANSVCLNSLGKFQAAARSR*RNCFDS
Trigger: GGAGTCAAAGCAGTTCCTTCACCGAGACCTGGCAGC...TGCCTGAAATTTCCCGAGAGAATTAAGACAGACTGAATTTGCGATGAAAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp CGGGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCTGTCAGATTTGCTGCTaGACTTGCTATACATCAGGA +
Preference number: 4 (lower is better)
Translates to: REISGTIISWPLLRSHYPCQICC*TCYTSG
Trigger: TCCTGATGTATAGCAAGTTCAGCAGCAAATCTGACA...GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AGAGAAGTAGAACCAAGAAGCTTATTGGCGAGCTCAGGATTCTTCATCCATGACGCCAGCAACTGTACATaGTGGTATATACCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: REVEPRSLLASSGFFIHDASNCT*WYIPSL
Trigger: CAGAGAAGGTATATACCATCATGTACAGTTGCTGGC...GTCATGGATGAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTTCTACTTCTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR TCA 90 bp CCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTAGGATTCTTCATCCATaGCATCTAGAATATTGCTCA +
Preference number: 4 (lower is better)
Translates to: PFCIEWEHKGSRAPKLGIRILHP*HLEYCS
Trigger: TGAGCAATATTCTAGATGTCATGGATGAAGAATCCT...AATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCTCAATGATTGAAATTTaGTCCATTTCACTGGACTCT +
Preference number: 4 (lower is better)
Translates to: YDTISFLPNSVHPHTHTPSMIEI*SISLDS
Trigger: AGAGTCCAGTGAAATGGAGCAAATTTCAATCATTGA...GGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp GGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGCAGACACTGTATATTTaGCAGCTTTGCTGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GNFRHNNFLAFAQKPLSQQTLYI*QLCWSL
Trigger: GAGACTCCAGCAAAGCTGGCAAATATACAGTGTCTG...CTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp CACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAACCTGGATATGAGTCCTaGAGAGTTGTGCTGATGGTA +
Preference number: 4 (lower is better)
Translates to: HNNFLAFAQKPLSQGIKEPGYES*RVVLMV
Trigger: TACCATCAGCACAACTCTGCAGGACTCATATCCAGG...TTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp CGGGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCATTGAATTAGCAGTTTaGTGCGAAAGGTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: REISGTIISWPLLRSHYPIELAV*CERCSQ
Trigger: CTGGGAACACCTTTCGCAGCAAACTGCTAATTCAAT...GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS-3UTR CCA 90 bp AATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTAGCAGACACTGGCCCTaGAGACATATTCTTACAGTC +
Preference number: 4 (lower is better)
Translates to: NQRRGAFPDVERGLFVLSSRHWP*RHILTV
Trigger: GACTGTAAGAATATGTCTCCAGGGCCAGTGTCTGCT...ACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000372880.5
CDS-3UTR CCA 90 bp AATATTGCTCAGAAGAATTTTGAAAGTGGGACGCTCATCTGCTTTCTCATGCCATTTTCAGCTCACTTGTaGAGACTGGTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NIAQKNFESGTLICFLMPFSAHL*RLVLLL
Trigger: CAGCAGCAGCACCAGTCTCCACAAGTGAGCTGAAAA...TGGCATGAGAAAGCAGATGAGCGTCCCACTTTCAAAATTCTTCTGAGCAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR CCA 90 bp AGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAATTGGGGCTTGTGGAGGTTTTGTTGAGACACTaGATATTTGAGCCTGGATAT +
Preference number: 4 (lower is better)
Translates to: RAPKLGISSEKVKLGLVEVLLRH*IFEPGY
Trigger: ATATCCAGGCTCAAATATCCAGTGTCTCAACAAAAC...CTCCACAAGCCCCAATTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp TTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAGTAAATCTCTCATATaGCATCTTCCCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: FRHNNFLAFAQKPLSQGISKSLI*HLPQGV
Trigger: TACTCCCTGGGGAAGATGCCATATGAGAGATTTACT...GATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
3UTR CAA 72 bp TCTCGGGAAATTTCAGGCACAATAATTTCTTGGCCTTaGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SREISGTIISWP*LRSHYPRESKK
Trigger: CTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp GGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAATTTGGAGCCTACTaGGCTTGTGTATTCATCATC +
Preference number: 4 (lower is better)
Translates to: GTIISWPLLRSHYPRESKKFGAY*ACVFII
Trigger: GATGATGAATACACAAGCTCAGTAGGCTCCAAATTT...CTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTTTTCCTCTGAGAAAGTaGAATTGGGGCTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NQRRGAFPDVERGLFVLSFPLRK*NWGLWR
Trigger: TCTCCACAAGCCCCAATTTCACTTTCTCAGAGGAAA...ACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAATTCTATGGAGTCTTCTaGTTCAGTGACATAGTTACT +
Preference number: 4 (lower is better)
Translates to: RCIPRCREGPFCIEWEHKFYGVF*FSDIVT
Trigger: AGTAACTATGTCACTGAAGCAGAAGACTCCATAGAA...TTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCTTCTATGGAGTCTTCTaGTTCAGTGACATAGTTACT +
Preference number: 4 (lower is better)
Translates to: KCLLKELLDPFVRLFTSSFYGVF*FSDIVT
Trigger: AGTAACTATGTCACTGAAGCAGAAGACTCCATAGAA...GGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp CAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGTTCTATGGAGTCTTCTaGTTCAGTGACATAGTTACT +
Preference number: 4 (lower is better)
Translates to: QRRGAFPDVERGLFVLSGFYGVF*FSDIVT
Trigger: AGTAACTATGTCACTGAAGCAGAAGACTCCATAGAA...CCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp TTTATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCTTCTATGGAGTCTTCTaGTTCAGTGACATAGTTACT +
Preference number: 4 (lower is better)
Translates to: FMTPFHSCQIRSTPTHTPFYGVF*FSDIVT
Trigger: AGTAACTATGTCACTGAAGCAGAAGACTCCATAGAA...GGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTCAGACACTGTATATTTaGCAGCTTTGCTGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: NQRRGAFPDVERGLFVLSQTLYI*QLCWSL
Trigger: GAGACTCCAGCAAAGCTGGCAAATATACAGTGTCTG...ACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGTTTTGTTGAGACACTaGATATTTGAGCCTGGATAT +
Preference number: 4 (lower is better)
Translates to: RCIPRCREGPFCIEWEHKVLLRH*IFEPGY
Trigger: ATATCCAGGCTCAAATATCCAGTGTCTCAACAAAAC...TTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCGTTTTGTTGAGACACTaGATATTTGAGCCTGGATAT +
Preference number: 4 (lower is better)
Translates to: KCLLKELLDPFVRLFTSSVLLRH*IFEPGY
Trigger: ATATCCAGGCTCAAATATCCAGTGTCTCAACAAAAC...GGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp GGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGAGTAAATCTCTCATATaGCATCTTCCCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: GNFRHNNFLAFAQKPLSQSKSLI*HLPQGV
Trigger: TACTCCCTGGGGAAGATGCCATATGAGAGATTTACT...CTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp TTGCTCAGAAGAATTTTGAAAGTGGGACGCTCATCTGCTTTCTCATGCCAGCAAAACCAAGAAGCTTATTaGCGAGCTCAGGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLRRILKVGRSSAFSCQQNQEAY*RAQDSS
Trigger: TGAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTT...TTGCTGGCATGAGAAAGCAGATGAGCGTCCCACTTTCAAAATTCTTCTGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618050.4
3UTR CAA 72 bp TTAATTCTCTCGGGAAATTTCAGGCACAATAATTTCTaGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATC +
Preference number: 4 (lower is better)
Translates to: LILSGNFRHNNF*AFAQKPLSQGI
Trigger: GATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCGAGAGAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp GGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGCTGTTTCAACACAAGTaGTCTTCTCAACATCTATTG +
Preference number: 4 (lower is better)
Translates to: GTIISWPLLRSHYPRESKLFQHK*SSQHLL
Trigger: CAATAGATGTTGAGAAGATCACTTGTGTTGAAACAG...CTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp TCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACACTGTTTCAACACAAGTaGTCTTCTCAACATCTATTG +
Preference number: 4 (lower is better)
Translates to: STKCLLKELLDPFVRLFTLFQHK*SSQHLL
Trigger: CAATAGATGTTGAGAAGATCACTTGTGTTGAAACAG...TGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp GAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGAAATTTGGAGCCTACTaGGCTTGTGTATTCATCATC +
Preference number: 4 (lower is better)
Translates to: EISGTIISWPLLRSHYPRKFGAY*ACVFII
Trigger: GATGATGAATACACAAGCTCAGTAGGCTCCAAATTT...CCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp CGGGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGATTCTTCATCCATaGCATCTAGAATATTGCTCA +
Preference number: 4 (lower is better)
Translates to: REISGTIISWPLLRSHYPRILHP*HLEYCS
Trigger: TGAGCAATATTCTAGATGTCATGGATGAAGAATCCT...GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AATATTTTCATCGCAAATTCAGTCTGTCTTAATTCTCTCGGGAAATTTCAGGCAACCGGATTACGTTTTTaGGCTGGTGAATCCACCGCT +
Preference number: 4 (lower is better)
Translates to: NIFIANSVCLNSLGKFQATGLRF*AGESTA
Trigger: AGCGGTGGATTCACCAGCTCAAAAACGTAATCCGGT...TGCCTGAAATTTCCCGAGAGAATTAAGACAGACTGAATTTGCGATGAAAATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTCTGTTTCAACACAAGTaGTCTTCTCAACATCTATTG +
Preference number: 4 (lower is better)
Translates to: NQRRGAFPDVERGLFVLSLFQHK*SSQHLL
Trigger: CAATAGATGTTGAGAAGATCACTTGTGTTGAAACAG...ACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AATATTTTCATCGCAAATTCAGTCTGTCTTAATTCTCTCGGGAAATTTCAGGCACATCCAGGACATACCTaGACAGGCCGAAATCAGATA +
Preference number: 4 (lower is better)
Translates to: NIFIANSVCLNSLGKFQAHPGHT*TGRNQI
Trigger: TATCTGATTTCGGCCTGTCCAGGTATGTCCTGGATG...TGCCTGAAATTTCCCGAGAGAATTAAGACAGACTGAATTTGCGATGAAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AATATTTTCATCGCAAATTCAGTCTGTCTTAATTCTCTCGGGAAATTTCAGGCAACCGGACTGGAAATTTaGAGCCTACTGAGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: NIFIANSVCLNSLGKFQATGLEI*SLLSLC
Trigger: ACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGT...TGCCTGAAATTTCCCGAGAGAATTAAGACAGACTGAATTTGCGATGAAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR TCA 90 bp AATATTTTCATCGCAAATTCAGTCTGTCTTAATTCTCTCGGGAAATTTCAGGCATTTCCTCTGAGAAAGTaGAATTGGGGCTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NIFIANSVCLNSLGKFQAFPLRK*NWGLWR
Trigger: TCTCCACAAGCCCCAATTTCACTTTCTCAGAGGAAA...TGCCTGAAATTTCCCGAGAGAATTAAGACAGACTGAATTTGCGATGAAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CCA 90 bp AATATTTTCATCGCAAATTCAGTCTGTCTTAATTCTCTCGGGAAATTTCAGGCAGGCACAATAATTTCTTaGCCTTTGCTCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: NIFIANSVCLNSLGKFQAGTIIS*PLLRSH
Trigger: GTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCC...TGCCTGAAATTTCCCGAGAGAATTAAGACAGACTGAATTTGCGATGAAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR GCA 90 bp AACCAAGAAGCTTATTGGCGAGCTCAGGATTCTTCATCCATGACATCTAGAATATCAATGATTGAAATTTaGTCCATTTCACTGGACTCT +
Preference number: 4 (lower is better)
Translates to: NQEAYWRAQDSSSMTSRISMIEI*SISLDS
Trigger: AGAGTCCAGTGAAATGGAGCAAATTTCAATCATTGA...TATTCTAGATGTCATGGATGAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR GCA 90 bp AATATTTTCATCGCAAATTCAGTCTGTCTTAATTCTCTCGGGAAATTTCAGGCATCAATGATTGAAATTTaGTCCATTTCACTGGACTCT +
Preference number: 4 (lower is better)
Translates to: NIFIANSVCLNSLGKFQASMIEI*SISLDS
Trigger: AGAGTCCAGTGAAATGGAGCAAATTTCAATCATTGA...TGCCTGAAATTTCCCGAGAGAATTAAGACAGACTGAATTTGCGATGAAAATATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS CCA 90 bp GTGTTCCCAGTGACCTTGAGGTGGAACAGGAATGGAACGTGGAGGTaGAGGACCCCTTCATTCGACCCTAGTCCTGGCTTCCCTCGGGGA +
Preference number: 5 (lower is better)
Translates to: VFPVTLRWNRNGTWR*RTPSFDPSPGFPRG
Trigger: TCCCCGAGGGAAGCCAGGACTAGGGTCGAATGAAGGGGTCCTCCACCTCCACGTTCCATTCCTGTTCCACCTCAAGGTCACTGGGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS-3UTR CAA 90 bp GCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTACAAGATGGGGCGCTGCTaGGTGCAGACGCCATACAAC +
Preference number: 5 (lower is better)
Translates to: AKFGPPPHTHPQALPNAYKMGRC*VQTPYN
Trigger: GTTGTATGGCGTCTGCACCAAGCAGCGCCCCATCTT...GTAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS CCA 90 bp CGAAAGGTGTTCCCAGTGACCTTGAGGTGGAACAGGAATGGAACGTaGAGGTGGAGGACCCCTTCATTCGACCCTAGTCCTGGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: RKVFPVTLRWNRNGT*RWRTPSFDPSPGFP
Trigger: AGGGAAGCCAGGACTAGGGTCGAATGAAGGGGTCCTCCACCTCCACGTTCCATTCCTGTTCCACCTCAAGGTCACTGGGAACACCTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS TCA 90 bp CAAATGCATCCACAGGCCCCAGTATGTGACTCTGAAGGAACCAAATaGTGGCCCCATGCCAGGAGCAGTCCCATTGGGAAGCACAGTCCC +
Preference number: 5 (lower is better)
Translates to: QMHPQAPVCDSEGTK*WPHARSSPIGKHSP
Trigger: GGGACTGTGCTTCCCAATGGGACTGCTCCTGGCATGGGGCCATCATTTGGTTCCTTCAGAGTCACATACTGGGGCCTGTGGATGCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478995.1
CDS TCA 90 bp CAGGACTTCCGGTGGGGACCACCGGACTGGAAATTTGGAGCCTACTaGGCTTGTGTATTCATCATCCAGGACATACCTGGACAGGCCGAA +
Preference number: 5 (lower is better)
Translates to: QDFRWGPPDWKFGAY*ACVFIIQDIPGQAE
Trigger: TTCGGCCTGTCCAGGTATGTCCTGGATGATGAATACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTGGTCCCCACCGGAAGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000621635.4
CDS-3UTR CAA 90 bp CAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTACTCGGGGAAGAGGCTTTTTaGTCTTCCGGTGAGAACTCC +
Preference number: 5 (lower is better)
Translates to: QIRSTPTHTPPSSTKCLLGEEAF*SSGENS
Trigger: GGAGTTCTCACCGGAAGACAAAAAAGCCTCTTCCCC...GAGTAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CCAGATGAGGCCTGTAGAGACGTAGGCCTTGGGCAATGTGTTCAGCAGTCTCACCCTTTTTCAGCTCACTaGTGGAGACTGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PDEACRDVGLGQCVQQSHPFSAH*WRLVLL
Trigger: CAGCAGCACCAGTCTCCACAAGTGAGCTGAAAAAGG...GTGAGACTGCTGAACACATTGCCCAAGGCCTACGTCTCTACAGGCCTCATCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR CAA 90 bp CCAGATGAGGCCTGTAGAGACGTAGGCCTTGGGCAATGTGTTCAGCAGTCTCACATGACGTATCACCCCTaGAGGGTCCCCTGTGGATTT +
Preference number: 5 (lower is better)
Translates to: PDEACRDVGLGQCVQQSHMTYHP*RVPCGF
Trigger: AAATCCACAGGGGACCCTCAAGGGGTGATACGTCAT...GTGAGACTGCTGAACACATTGCCCAAGGCCTACGTCTCTACAGGCCTCATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR CAA 90 bp TGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTACTACTCAAAGAGCTGTaGGACCCCTTTGTGCGGCTA +
Preference number: 5 (lower is better)
Translates to: CQIRSTPTHTPPSSTKCLLLKEL*DPFVRL
Trigger: TAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAG...TAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS TCA 90 bp TGTGTGCTCAGTCCTGACTTAATGCAGGTAGCTTCCCAGATGCATTaGGATGCCAGGACTTGGAAGGTGGGACTCGATCGCAGCAGACAC +
Preference number: 5 (lower is better)
Translates to: CVLSPDLMQVASQMH*DARTWKVGLDRSRH
Trigger: GTGTCTGCTGCGATCGAGTCCCACCTTCCAAGTCCTGGCATCTCAATGCATCTGGGAAGCTACCTGCATTAAGTCAGGACTGAGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000464567.1
CDS TCA 90 bp ACAGCTCTCAGTCCTGACTTAATGCAGGTAGCTTCCCAGATGCATTaGGATGCCAGGACTTGGAAGGTGGGACTCGATCGCAGCAGACAC +
Preference number: 5 (lower is better)
Translates to: TALSPDLMQVASQMH*DARTWKVGLDRSRH
Trigger: GTGTCTGCTGCGATCGAGTCCCACCTTCCAAGTCCTGGCATCTCAATGCATCTGGGAAGCTACCTGCATTAAGTCAGGACTGAGAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS TCA 90 bp TCAGGATTCCGGTGGGGACCACCGGACTGGAAATTTGGAGCCTACTaGGCTTGTGTATTCATCATCCAGGACATACCTGGACAGGCCGAA +
Preference number: 5 (lower is better)
Translates to: SGFRWGPPDWKFGAY*ACVFIIQDIPGQAE
Trigger: TTCGGCCTGTCCAGGTATGTCCTGGATGATGAATACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTGGTCCCCACCGGAATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS CCA 90 bp AGAAAGATGCTCTCCAGAATCACTGCGGCCATAGCTTCTTCTTTCTaGAGTTCACCTGTGTGCTCTCCCCCGGAACAGTGCCTGCCACAT +
Preference number: 5 (lower is better)
Translates to: RKMLSRITAAIASSF*SSPVCSPPEQCLPH
Trigger: ATGTGGCAGGCACTGTTCCGGGGGAGAGCACACAGGTGAACTCCAGAAAGAAGAAGCTATGGCCGCAGTGATTCTGGAGAGCATCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS-3UTR CAA 90 bp ATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGATGACGTATCACCCCTaGAGGGTCCCCTGTGGATTT +
Preference number: 5 (lower is better)
Translates to: IEWEHKGSRAPKLGISSEMTYHP*RVPCGF
Trigger: AAATCCACAGGGGACCCTCAAGGGGTGATACGTCAT...CTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGCTTCACTACCCCAAATaGTCCAGTCCCCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: WEHKGSRAPKLGISSEKVLHYPK*SSPQLL
Trigger: AAGGAGCTGGGGACTGGACAATTTGGGGTAGTGAAG...CACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTAGGTGAAGGAACTGCTTaGACTCCAGGTATTCCATGG +
Preference number: 5 (lower is better)
Translates to: CQIRSTPTHTPPSSTKCLGEGTA*TPGIPW
Trigger: CCATGGAATACCTGGAGTCAAAGCAGTTCCTTCACC...TAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS TCA 90 bp CAGGACTTCCGGTGGGGACCACCGGACTGGAAATTTGGAGCCTACTaGGCTTGTGTATTCATCATCCAGGACATACCTGCAAGGGATTCA +
Preference number: 5 (lower is better)
Translates to: QDFRWGPPDWKFGAY*ACVFIIQDIPARDS
Trigger: TGAATCCCTTGCAGGTATGTCCTGGATGATGAATACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTGGTCCCCACCGGAAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488970.1
CDS-3UTR CAA 90 bp ATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCTTGAGATGCCAGGACTaGGAAGGTGGGACTCGATCG +
Preference number: 5 (lower is better)
Translates to: IPRCREGPFCIEWEHKGSLRCQD*EGGTRS
Trigger: CGATCGAGTCCCACCTTCCAAGTCCTGGCATCTCAA...GGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000372880.5
CDS-3UTR CAA 90 bp CCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCTCCTCCTTTTTCAGCTCACTaGTGGAGACTGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PTQRAVGPLCAAIYILPPPFSAH*WRLVLL
Trigger: CAGCAGCACCAGTCTCCACAAGTGAGCTGAAAAAGG...AGGAGGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAGGGGCCTTTTTGTATaGAGTGGGAGCACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: WEHKGSRAPKLGISSEKVRGLFV*SGSTKA
Trigger: AGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCT...CACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCTCCTCTACTCAAAGAGCTGTaGGACCCCTTTGTGCGGCTA +
Preference number: 5 (lower is better)
Translates to: PTQRAVGPLCAAIYILPPLLKEL*DPFVRL
Trigger: TAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAG...AGGAGGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGGACACCATTTCATTCTaGCCAAATTCGGTCCACCCC +
Preference number: 5 (lower is better)
Translates to: FLPNSVHPHTHTPKLYQMDTISF*PNSVHP
Trigger: GGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTC...CATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGATGAACTGGAACAATaGGCTCCCTCCAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: EGPFCIEWEHKGSRAPKLDELEQ*APSRSS
Trigger: TGAAGACCTGGAGGGAGCCAATTGTTCCAGTTCATC...AAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS CCA 90 bp TGCTATACATCAGGACTTCCGGTGGGGACCACCGGACTGGAAATTTaGAGCCTACTGAGCTTGTGTATTCATCATCCAGGACATACCTGG +
Preference number: 5 (lower is better)
Translates to: CYTSGLPVGTTGLEI*SLLSLCIHHPGHTW
Trigger: CCAGGTATGTCCTGGATGATGAATACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTGGTCCCCACCGGAAGTCCTGATGTATAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000621635.4
CDS CCA 90 bp TGCTATACATCAGGACTTCCGGTGGGGACCACCGGACTGGAAATTTaGAGCCTACTGAGCTTGTGTATTCATCATCCAGGACATACCTGC +
Preference number: 5 (lower is better)
Translates to: CYTSGLPVGTTGLEI*SLLSLCIHHPGHTC
Trigger: GCAGGTATGTCCTGGATGATGAATACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTGGTCCCCACCGGAAGTCCTGATGTATAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488970.1
CDS-3UTR CAA 90 bp CAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGTTGAGATGCCAGGACTaGGAAGGTGGGACTCGATCG +
Preference number: 5 (lower is better)
Translates to: QRRGAFPDVERGLFVLSGLRCQD*EGGTRS
Trigger: CGATCGAGTCCCACCTTCCAAGTCCTGGCATCTCAA...CCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000372880.5
CDS-3UTR CAA 90 bp AAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAATTGGGGGGGGAAGAGGCTTTTTaGTCTTCCGGTGAGAACTCC +
Preference number: 5 (lower is better)
Translates to: KGSRAPKLGISSEKVKLGGEEAF*SSGENS
Trigger: GGAGTTCTCACCGGAAGACAAAAAAGCCTCTTCCCC...CCCCAATTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTT
51% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAATTGGGGCTTGTGGAGGGGGAAGAGGCTTTTTaGTCTTCCGGTGAGAACTCC +
Preference number: 5 (lower is better)
Translates to: RAPKLGISSEKVKLGLVEGEEAF*SSGENS
Trigger: GGAGTTCTCACCGGAAGACAAAAAAGCCTCTTCCCC...CTCCACAAGCCCCAATTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTCCTTTTTCAGCTCACTaGTGGAGACTGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PFCIEWEHKGSRAPKLGIPFSAH*WRLVLL
Trigger: CAGCAGCACCAGTCTCCACAAGTGAGCTGAAAAAGG...AATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCCCTTTTTCAGCTCACTaGTGGAGACTGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: NAYSKSCWTPLCGYLHPPPFSAH*WRLVLL
Trigger: CAGCAGCACCAGTCTCCACAAGTGAGCTGAAAAAGG...GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTAACAGACACTGTATATTaGCCAGCTTTGCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: CQIRSTPTHTPPSSTKCLTDTVY*PALLES
Trigger: AGACTCCAGCAAAGCTGGCAAATATACAGTGTCTGT...TAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp ATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCATGACGTATCACCCCTaGAGGGTCCCCTGTGGATTT +
Preference number: 5 (lower is better)
Translates to: IPRCREGPFCIEWEHKGSMTYHP*RVPCGF
Trigger: AAATCCACAGGGGACCCTCAAGGGGTGATACGTCAT...GGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAAATGACGTATCACCCCTaGAGGGTCCCCTGTGGATTT +
Preference number: 5 (lower is better)
Translates to: EHKGSRAPKLGISSEKVKMTYHP*RVPCGF
Trigger: AAATCCACAGGGGACCCTCAAGGGGTGATACGTCAT...TTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCTCCTCCTTCTTTGATCATCTaGATGGCCACGTCGTACTGG +
Preference number: 5 (lower is better)
Translates to: PTQRAVGPLCAAIYILPPPSLII*MATSYW
Trigger: CCAGTACGACGTGGCCATCAAGATGATCAAAGAAGG...AGGAGGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGATGGGGCGCTGCTaGGTGCAGACGCCATACAAC +
Preference number: 5 (lower is better)
Translates to: GTIISWPLLRSHYPRESKKMGRC*VQTPYN
Trigger: GTTGTATGGCGTCTGCACCAAGCAGCGCCCCATCTT...CTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACAAAGATGGGGCGCTGCTaGGTGCAGACGCCATACAAC +
Preference number: 5 (lower is better)
Translates to: STKCLLKELLDPFVRLFTKMGRC*VQTPYN
Trigger: GTTGTATGGCGTCTGCACCAAGCAGCGCCCCATCTT...TGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCTCCTGGTGAAGGAACTGCTTaGACTCCAGGTATTCCATGG +
Preference number: 5 (lower is better)
Translates to: PTQRAVGPLCAAIYILPPGEGTA*TPGIPW
Trigger: CCATGGAATACCTGGAGTCAAAGCAGTTCCTTCACC...AGGAGGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp ATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGTGGAGCCTACTGAGCTaGTGTATTCATCATCCAGGA +
Preference number: 5 (lower is better)
Translates to: IEWEHKGSRAPKLGISSEWSLLS*CIHHPG
Trigger: TCCTGGATGATGAATACACAAGCTCAGTAGGCTCCA...CTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTCACCGGACTGGAAATTaGGAGCCTACTGAGCTTGTG +
Preference number: 5 (lower is better)
Translates to: PFCIEWEHKGSRAPKLGIHRTGN*EPTELV
Trigger: CACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTG...AATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCCACCGGACTGGAAATTaGGAGCCTACTGAGCTTGTG +
Preference number: 5 (lower is better)
Translates to: CIPRCREGPFCIEWEHKGHRTGN*EPTELV
Trigger: CACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTG...GCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GATGAGGCCTGTAGAGACGTAGGCCTTGGGCAATGTGTTCAGCAGTCTCACTGTGAACCAAGAAGCTTATaGGCGAGCTCAGGATTCTTC +
Preference number: 5 (lower is better)
Translates to: DEACRDVGLGQCVQQSHCEPRSL*ASSGFF
Trigger: GAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTTC...ACAGTGAGACTGCTGAACACATTGCCCAAGGCCTACGTCTCTACAGGCCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR CAA 90 bp TGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGGAACCAAGAAGCTTATaGGCGAGCTCAGGATTCTTC +
Preference number: 5 (lower is better)
Translates to: WEHKGSRAPKLGISSEKVEPRSL*ASSGFF
Trigger: GAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTTC...CACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp ATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCCCAGGGCTCCTAAGCTaGGGATTTCCTCTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: IPRCREGPFCIEWEHKGSPGLLS*GFPLRK
Trigger: CTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGG...GGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAATTGGGGCTTGTGGAGCCAGGGCTCCTAAGCTaGGGATTTCCTCTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: RAPKLGISSEKVKLGLVEPGLLS*GFPLRK
Trigger: CTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGG...CTCCACAAGCCCCAATTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCTCCTGACACCATTTCATTCTaGCCAAATTCGGTCCACCCC +
Preference number: 5 (lower is better)
Translates to: PTQRAVGPLCAAIYILPPDTISF*PNSVHP
Trigger: GGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTC...AGGAGGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAAGAGTCCTCCAGAAGGTaGGTGTGTAACACACAGCTC +
Preference number: 5 (lower is better)
Translates to: EHKGSRAPKLGISSEKVKESSRR*VCNTQL
Trigger: GAGCTGTGTGTTACACACCAACCTTCTGGAGGACTC...TTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS-3UTR CAA 90 bp CATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAAGAAAGGGATCCATTTTaGAGTCCTCCAGAAGGTTGG +
Preference number: 5 (lower is better)
Translates to: HSCQIRSTPTHTPPSSTKERDPF*SPPEGW
Trigger: CCAACCTTCTGGAGGACTCAAAAATGGATCCCTTTC...TTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS CCA 90 bp TTACCAAACAGTTTCGAGCTGCCAGGTAATACTGGCTCTGAGGTGTaGAACACACAACATAATGACGTATCACCCCTTGAGGGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: LPNSFELPGNTGSEV*NTQHNDVSPLEGPL
Trigger: CAGGGGACCCTCAAGGGGTGATACGTCATTATGTTGTGTGTTCCACACCTCAGAGCCAGTATTACCTGGCAGCTCGAAACTGTTTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS CCA 90 bp TTGCTATACATCAGGATTCCGGTGGGGACCACCGGACTGGAAATTTaGAGCCTACTGAGCTTGTGTATTCATCATCCAGGACATACCTGG +
Preference number: 5 (lower is better)
Translates to: LLYIRIPVGTTGLEI*SLLSLCIHHPGHTW
Trigger: CCAGGTATGTCCTGGATGATGAATACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTGGTCCCCACCGGAATCCTGATGTATAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR CAA 90 bp GAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTACAGACACTGTATATTaGCCAGCTTTGCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: EGPFCIEWEHKGSRAPKLTDTVY*PALLES
Trigger: AGACTCCAGCAAAGCTGGCAAATATACAGTGTCTGT...AAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGACAGACACTGTATATTaGCCAGCTTTGCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: WEHKGSRAPKLGISSEKVTDTVY*PALLES
Trigger: AGACTCCAGCAAAGCTGGCAAATATACAGTGTCTGT...CACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGAGAAGGTCAGGTCCTTaGGATCAATTTCCCATGATC +
Preference number: 5 (lower is better)
Translates to: SGSTKAPGLLSLGFPLRKRRSGP*DQFPMI
Trigger: GATCATGGGAAATTGATCCAAAGGACCTGACCTTCT...CTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAACTTCACTACCCCAAATaGTCCAGTCCCCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: RCIPRCREGPFCIEWEHKLHYPK*SSPQLL
Trigger: AAGGAGCTGGGGACTGGACAATTTGGGGTAGTGAAG...TTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTGACATGGAGCCTTCTTaGATCATCTTGATGGCCACG +
Preference number: 5 (lower is better)
Translates to: PFCIEWEHKGSRAPKLGIDMEPS*IILMAT
Trigger: CGTGGCCATCAAGATGATCAAAGAAGGCTCCATGTC...AATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCGACATGGAGCCTTCTTaGATCATCTTGATGGCCACG +
Preference number: 5 (lower is better)
Translates to: NAYSKSCWTPLCGYLHPPDMEPS*IILMAT
Trigger: CGTGGCCATCAAGATGATCAAAGAAGGCTCCATGTC...GGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TTTATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCACCGGACTGGAAATTaGGAGCCTACTGAGCTTGTG +
Preference number: 5 (lower is better)
Translates to: FMTPFHSCQIRSTPTHTPHRTGN*EPTELV
Trigger: CACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTG...GGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCACCGGACTGGAAATTaGGAGCCTACTGAGCTTGTG +
Preference number: 5 (lower is better)
Translates to: KCLLKELLDPFVRLFTSSHRTGN*EPTELV
Trigger: CACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTG...GGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCCTCCTGAACCAAGAAGCTTATaGGCGAGCTCAGGATTCTTC +
Preference number: 5 (lower is better)
Translates to: PTQRAVGPLCAAIYILPPEPRSL*ASSGFF
Trigger: GAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTTC...AGGAGGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCACCAGGGCTCCTAAGCTaGGGATTTCCTCTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: FLGLCSEATIPGNQRRGAPGLLS*GFPLRK
Trigger: CTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGG...TGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTATAATTTCTTGGCCTTaGCTCAGAAGCCACTATCCC +
Preference number: 5 (lower is better)
Translates to: EGPFCIEWEHKGSRAPKLIISWP*LRSHYP
Trigger: GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTAT...AAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGAGGCACAATAATTTCTaGGCCTTTGCTCAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: SGSTKAPGLLSLGFPLRKRHNNF*AFAQKP
Trigger: TGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCT...CTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAAGCTGTTGGACCCCTTaGTGCGGCTATTTACATCCT +
Preference number: 5 (lower is better)
Translates to: FPDVERGLFVLSGSTKAPSCWTP*CGYLHP
Trigger: AGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCT...TGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTCTACTCAAAGAGCTGTaGGACCCCTTTGTGCGGCTA +
Preference number: 5 (lower is better)
Translates to: LLRSHYPRESKKRCIPRCLLKEL*DPFVRL
Trigger: TAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAG...ACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCACCTGTGTGCTTCTTaGACTGCTTTTCTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: FLPNSVHPHTHTPKLYQMHLCAS*TAFLLF
Trigger: AAACAGGAGAAAAGCAGTCAAAGAAGCACACAGGTG...CATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS TCA 90 bp GATCCGTATCCCAGGCCTGCAGTGGAAGGTGCATTCTTGTTTTGTTaGGACACTGGATATTTGAGCCTGGATATGAGTCCTGCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: DPYPRPAVEGAFLFC*DTGYLSLDMSPAEL
Trigger: CAACTCTGCAGGACTCATATCCAGGCTCAAATATCCAGTGTCTCAACAAAACAAGAATGCACCTTCCACTGCAGGCCTGGGATACGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000470329.1
ENST00000618050.4
ENST00000621635.4
CDS GCA 90 bp CTTTTTCTGTTGGGATCGCTTCAGAAAGATGCTCTCCAGAATCACTaGGGCCATAGCTTCTTCTTTCTGGAGTTCACCTGTGTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LFLLGSLQKDALQNH*GHSFFFLEFTCVLS
Trigger: GGAGAGCACACAGGTGAACTCCAGAAAGAAGAAGCTATGGCCGCAGTGATTCTGGAGAGCATCTTTCTGAAGCGATCCCAACAGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS CCA 90 bp TCCCAGGCCTGCAGTGGAAGGTGCATTCTTGTTTTGTTGAGACACTaGATATTTGAGCCTGGATATGAGTCCTGCAGAGTTGTGCTGATG +
Preference number: 5 (lower is better)
Translates to: SQACSGRCILVLLRH*IFEPGYESCRVVLM
Trigger: CATCAGCACAACTCTGCAGGACTCATATCCAGGCTCAAATATCCAGTGTCTCAACAAAACAAGAATGCACCTTCCACTGCAGGCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000470329.1
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCAGGGCTCCTAAGCTTTCTTCTCAACATCTATaGAACCCTTCTTACTGCCTC +
Preference number: 5 (lower is better)
Translates to: EGPFCIEWEHKGSRAPKLSSQHL*NPSYCL
Trigger: GAGGCAGTAAGAAGGGTTCAATAGATGTTGAGAAGA...AAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGCCTACTCGCAGCTGTAGATCATTaGCATTCATTGGCATGTAAT +
Preference number: 5 (lower is better)
Translates to: QIRSTPTHTPPSSTKCLLAAVDH*HSLACN
Trigger: ATTACATGCCAATGAATGCAAATGATCTACAGCTGC...GAGTAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTCCTTCTTTGATCATCTaGATGGCCACGTCGTACTGG +
Preference number: 5 (lower is better)
Translates to: LLRSHYPRESKKRCIPRCPSLII*MATSYW
Trigger: CCAGTACGACGTGGCCATCAAGATGATCAAAGAAGG...ACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAACCTTCTTTGATCATCTaGATGGCCACGTCGTACTGG +
Preference number: 5 (lower is better)
Translates to: RCIPRCREGPFCIEWEHKPSLII*MATSYW
Trigger: CCAGTACGACGTGGCCATCAAGATGATCAAAGAAGG...TTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTAGGTGAAGGAACTGCTTaGACTCCAGGTATTCCATGG +
Preference number: 5 (lower is better)
Translates to: CSEATIPGNQRRGAFPDVGEGTA*TPGIPW
Trigger: CCATGGAATACCTGGAGTCAAAGCAGTTCCTTCACC...TACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACCAAATGTTGCTCAGAAGAATTTaGAAAGTGGGACGCTCATCT +
Preference number: 5 (lower is better)
Translates to: FLPNSVHPHTHTPKLYQMLLRRI*KVGRSS
Trigger: AGATGAGCGTCCCACTTTCAAAATTCTTCTGAGCAA...CATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GATGAGGCCTGTAGAGACGTAGGCCTTGGGCAATGTGTTCAGCAGTCTCACTGTTTGCTCAGAAGAATTTaGAAAGTGGGACGCTCATCT +
Preference number: 5 (lower is better)
Translates to: DEACRDVGLGQCVQQSHCLLRRI*KVGRSS
Trigger: AGATGAGCGTCCCACTTTCAAAATTCTTCTGAGCAA...ACAGTGAGACTGCTGAACACATTGCCCAAGGCCTACGTCTCTACAGGCCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR CAA 90 bp AAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAATTGGGGGAACCAAGAAGCTTATaGGCGAGCTCAGGATTCTTC +
Preference number: 5 (lower is better)
Translates to: KGSRAPKLGISSEKVKLGEPRSL*ASSGFF
Trigger: GAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTTC...CCCCAATTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGAGGCACAATAATTTCTaGGCCTTTGCTCAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: SHYPRESKKRCIPRCREGRHNNF*AFAQKP
Trigger: TGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCT...CCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CGGGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCGTGTTCCCAGTGACCTaGAGGTGGAACAGGAATGGA +
Preference number: 5 (lower is better)
Translates to: REISGTIISWPLLRSHYPVFPVT*RWNRNG
Trigger: TCCATTCCTGTTCCACCTCAAGGTCACTGGGAACAC...GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS-3UTR CAA 90 bp GCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGGATTTGCTGCTGAACTaGCTATACATCAGGATTCCG +
Preference number: 5 (lower is better)
Translates to: AFAQKPLSQGIKEEVHSQDLLLN*LYIRIP
Trigger: CGGAATCCTGATGTATAGCAAGTTCAGCAGCAAATC...CTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS TCA 90 bp TGCTTTTCTCCTGTTTCTTATGATCCAGTCCAGACTCACACAGCCTaGAAATGTGGTAGCTCTTCCTTAGGTGCCACTGGTCCATCACTC +
Preference number: 5 (lower is better)
Translates to: CFSPVSYDPVQTHTA*KCGSSSLGATGPSL
Trigger: GAGTGATGGACCAGTGGCACCTAAGGAAGAGCTACCACATTTTCAGGCTGTGTGAGTCTGGACTGGATCATAAGAAACAGGAGAAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS GCA 90 bp CTTTTTCTGTTGGGATCGCTTCAGAAAGATGCTCTCCAGAATCACTaGGGCCATAGCTTCTTCTTTCTGGAGTTCACCTGTGTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: LFLLGSLQKDALQNH*GHSFFFLEFTCVLS
Trigger: ACTGAGCACACAGGTGAACTCCAGAAAGAAGAAGCTATGGCCGCAGTGATTCTGGAGAGCATCTTTCTGAAGCGATCCCAACAGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000464567.1
CDS-3UTR CAA 90 bp GCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGTCTTCTCAACATCTATaGAACCCTTCTTACTGCCTC +
Preference number: 5 (lower is better)
Translates to: AFAQKPLSQGIKEEVHSQSSQHL*NPSYCL
Trigger: GAGGCAGTAAGAAGGGTTCAATAGATGTTGAGAAGA...CTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATCCTTAGTTCTTCAGTaGGGGAGAAGACGTAGAGAG +
Preference number: 5 (lower is better)
Translates to: FLGLCSEATIPGNQRRGASLVLQ*GRRRRE
Trigger: CTCTCTACGTCTTCTCCCCAACTGAAGAACTAAGGA...TGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AGCTCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTTCCTTAGTTCTTCAGTaGGGGAGAAGACGTAGAGAG +
Preference number: 5 (lower is better)
Translates to: SSTKCLLKELLDPFVRLFSLVLQ*GRRRRE
Trigger: CTCTCTACGTCTTCTCCCCAACTGAAGAACTAAGGA...AAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGGGGGAAGAGGCTTTTTaGTCTTCCGGTGAGAACTCC +
Preference number: 5 (lower is better)
Translates to: ESKKRCIPRCREGPFCIEGEEAF*SSGENS
Trigger: GGAGTTCTCACCGGAAGACAAAAAAGCCTCTTCCCC...CTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCCTCCACCATGGTAAGTaGCTTTCCTCCAAGATAAAA +
Preference number: 5 (lower is better)
Translates to: YDTISFLPNSVHPHTHTPLHHGK*LSSKIK
Trigger: TTTTATCTTGGAGGAAAGCAACTTACCATGGTGGAG...GGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACATCCTCCTGGAGCCTACTGAGCTaGTGTATTCATCATCCAGGA +
Preference number: 5 (lower is better)
Translates to: KCLLKELLDPFVRLFTSSWSLLS*CIHHPG
Trigger: TCCTGGATGATGAATACACAAGCTCAGTAGGCTCCA...GGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TATGACACCATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCTTGCTCAGAAGAATTTaGAAAGTGGGACGCTCATCT +
Preference number: 5 (lower is better)
Translates to: YDTISFLPNSVHPHTHTPLLRRI*KVGRSS
Trigger: AGATGAGCGTCCCACTTTCAAAATTCTTCTGAGCAA...GGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTACAAGGGGCCTTTTTGTATaGAGTGGGAGCACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: STKCLLKELLDPFVRLFTRGLFV*SGSTKA
Trigger: AGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCT...TGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CGGGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGGCCTTTTTGTATaGAGTGGGAGCACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: REISGTIISWPLLRSHYPRGLFV*SGSTKA
Trigger: AGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCT...GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp ATTTCATTCTTGCCAAATTCGGTCCACCCCCACACACACACCCCCAAGCTCTACTCCAATAACCATTTGTaGAATGGACCAACTGGCCAT +
Preference number: 5 (lower is better)
Translates to: ISFLPNSVHPHTHTPKLYSNNHL*NGPTGH
Trigger: ATGGCCAGTTGGTCCATTCAACAAATGGTTATTGGA...GTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS GCA 90 bp CTTTTTCTGTTGGGATCGCTTCAGAAAGATGCTCTCCAGAATCACTaGGGCCATAGCTTCTTCTTTCTGGAGTTCACCTGTGTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: LFLLGSLQKDALQNH*GHSFFFLEFTCVLL
Trigger: AAGAAGCACACAGGTGAACTCCAGAAAGAAGAAGCTATGGCCGCAGTGATTCTGGAGAGCATCTTTCTGAAGCGATCCCAACAGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS-3UTR CAA 90 bp CGGGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCTGGAGCCTACTGAGCTaGTGTATTCATCATCCAGGA +
Preference number: 5 (lower is better)
Translates to: REISGTIISWPLLRSHYPWSLLS*CIHHPG
Trigger: TCCTGGATGATGAATACACAAGCTCAGTAGGCTCCA...GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AGCTCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTGATTTGCTGCTGAACTaGCTATACATCAGGACTTCC +
Preference number: 5 (lower is better)
Translates to: SSTKCLLKELLDPFVRLFDLLLN*LYIRTS
Trigger: GGAAGTCCTGATGTATAGCAAGTTCAGCAGCAAATC...AAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000621635.4
CDS-3UTR CAA 90 bp AAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGGCCCAAATGTCAGATTaGCTGCTGAACTTGCTATAC +
Preference number: 5 (lower is better)
Translates to: KKRCIPRCREGPFCIEWEAQMSD*LLNLLY
Trigger: GTATAGCAAGTTCAGCAGCAAATCTGACATTTGGGC...CTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp TTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAAGGCTCCATTGCTCAGAAGAATTTaGAAAGTGGGACGCTCATCT +
Preference number: 5 (lower is better)
Translates to: FPDVERGLFVLSGSTKAPLLRRI*KVGRSS
Trigger: AGATGAGCGTCCCACTTTCAAAATTCTTCTGAGCAA...TGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAACCAGGGCTCCTAAGCTaGGGATTTCCTCTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: HNNFLAFAQKPLSQGIKEPGLLS*GFPLRK
Trigger: CTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGG...TTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGAGCTGTTGGACCCCTTaGTGCGGCTATTTACATCCT +
Preference number: 5 (lower is better)
Translates to: ESKKRCIPRCREGPFCIESCWTP*CGYLHP
Trigger: AGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCT...CTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTCTACTCAAAGAGCTGTaGGACCCCTTTGTGCGGCTA +
Preference number: 5 (lower is better)
Translates to: NQRRGAFPDVERGLFVLSLLKEL*DPFVRL
Trigger: TAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAG...ACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AGCTCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTGCATCCAATAACCATTaGTTGAATGGACCAACTGGC +
Preference number: 5 (lower is better)
Translates to: SSTKCLLKELLDPFVRLFASNNH*LNGPTG
Trigger: GCCAGTTGGTCCATTCAACAAATGGTTATTGGATGC...AAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS CCA 90 bp CCAGGACATACCTGCAAGGGATTCAGGACTTGTTGCATTAGGATTTaGAGGCTTGATATTTGCTTACGTTTTCTTGGCACGGTCACAAGA +
Preference number: 5 (lower is better)
Translates to: PGHTCKGFRTCCIRI*RLDICLRFLGTVTR
Trigger: TCTTGTGACCGTGCCAAGAAAACGTAAGCAAATATCAAGCCTCCAAATCCTAATGCAACAAGTCCTGAATCCCTTGCAGGTATGTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488970.1
CDS-3UTR CAA 90 bp TGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTATCTTCTCAACATCTATaGAACCCTTCTTACTGCCTC +
Preference number: 5 (lower is better)
Translates to: CSEATIPGNQRRGAFPDVSSQHL*NPSYCL
Trigger: GAGGCAGTAAGAAGGGTTCAATAGATGTTGAGAAGA...TACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGTCCTTAGTTCTTCAGTaGGGGAGAAGACGTAGAGAG +
Preference number: 5 (lower is better)
Translates to: GNFRHNNFLAFAQKPLSQSLVLQ*GRRRRE
Trigger: CTCTCTACGTCTTCTCCCCAACTGAAGAACTAAGGA...CTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GAGCACAAAGGCTCCAGGGCTCCTAAGCTTGGGATTTCCTCTGAGAAAGTGAAAGCAGCTGTAGATCATTaGCATTCATTGGCATGTAAT +
Preference number: 5 (lower is better)
Translates to: EHKGSRAPKLGISSEKVKAAVDH*HSLACN
Trigger: ATTACATGCCAATGAATGCAAATGATCTACAGCTGC...TTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGCACAAACTCCACCATGGTAAGTaGCTTTCCTCCAAGATAAAA +
Preference number: 5 (lower is better)
Translates to: RCIPRCREGPFCIEWEHKLHHGK*LSSKIK
Trigger: TTTTATCTTGGAGGAAAGCAACTTACCATGGTGGAG...TTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AGCTCTACCAAATGCCTACTCAAAGAGCTGTTGGACCCCTTTGTGCGGCTATTTCTCCACCATGGTAAGTaGCTTTCCTCCAAGATAAAA +
Preference number: 5 (lower is better)
Translates to: SSTKCLLKELLDPFVRLFLHHGK*LSSKIK
Trigger: TTTTATCTTGGAGGAAAGCAACTTACCATGGTGGAG...AAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGACATGGAGCCTTCTTaGATCATCTTGATGGCCACG +
Preference number: 5 (lower is better)
Translates to: NQRRGAFPDVERGLFVLSDMEPS*IILMAT
Trigger: CGTGGCCATCAAGATGATCAAAGAAGGCTCCATGTC...ACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGGATTTGCTGCTGAACTaGCTATACATCAGGACTTCC +
Preference number: 5 (lower is better)
Translates to: GTIISWPLLRSHYPRESKDLLLN*LYIRTS
Trigger: GGAAGTCCTGATGTATAGCAAGTTCAGCAGCAAATC...CTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000621635.4
CDS-3UTR CAA 90 bp GGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAGGCACAATAATTTCTaGGCCTTTGCTCAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: GTIISWPLLRSHYPRESKRHNNF*AFAQKP
Trigger: TGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCT...CTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTAGCTGTTGGACCCCTTaGTGCGGCTATTTACATCCT +
Preference number: 5 (lower is better)
Translates to: NQRRGAFPDVERGLFVLSSCWTP*CGYLHP
Trigger: AGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCT...ACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGACACCATTTCATTCTaGCCAAATTCGGTCCACCCC +
Preference number: 5 (lower is better)
Translates to: NQRRGAFPDVERGLFVLSDTISF*PNSVHP
Trigger: GGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTC...ACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS TCA 90 bp ATGAAACCTCCTTCTTTCCCCTCTTGCTTTAGCAGTTGCTCAGCCTaGCTCCGAGTCATGTGTTTGGAATACCACTCATACATTTCTATG +
Preference number: 5 (lower is better)
Translates to: MKPPSFPSCFSSCSA*LRVMCLEYHSYISM
Trigger: CATAGAAATGTATGAGTGGTATTCCAAACACATGACTCGGAGTCAGGCTGAGCAACTGCTAAAGCAAGAGGGGAAAGAAGGAGGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTTCCTTAGTTCTTCAGTaGGGGAGAAGACGTAGAGAG +
Preference number: 5 (lower is better)
Translates to: NQRRGAFPDVERGLFVLSSLVLQ*GRRRRE
Trigger: CTCTCTACGTCTTCTCCCCAACTGAAGAACTAAGGA...ACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGTGGGAGGCAGCTGTAGATCATTaGCATTCATTGGCATGTAAT +
Preference number: 5 (lower is better)
Translates to: KKRCIPRCREGPFCIEWEAAVDH*HSLACN
Trigger: ATTACATGCCAATGAATGCAAATGATCTACAGCTGC...CTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGACAGACACTGTATATTaGCCAGCTTTGCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: ESKKRCIPRCREGPFCIETDTVY*PALLES
Trigger: AGACTCCAGCAAAGCTGGCAAATATACAGTGTCTGT...CTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGAGAAGGTCAGGTCCTTaGGATCAATTTCCCATGATC +
Preference number: 5 (lower is better)
Translates to: EISGTIISWPLLRSHYPRRRSGP*DQFPMI
Trigger: GATCATGGGAAATTGATCCAAAGGACCTGACCTTCT...CCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGATTTGCTGCTGAACTaGCTATACATCAGGACTTCC +
Preference number: 5 (lower is better)
Translates to: EISGTIISWPLLRSHYPRDLLLN*LYIRTS
Trigger: GGAAGTCCTGATGTATAGCAAGTTCAGCAGCAAATC...CCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000621635.4
CDS-3UTR CAA 90 bp GAATCAAAGAAGAGGTGCATTCCCAGATGTAGAGAGGGGCCTTTTTGTATTGAGGCCCAAATGTCAGATTaGCTGCTGAACTTGCTATAC +
Preference number: 5 (lower is better)
Translates to: ESKKRCIPRCREGPFCIEAQMSD*LLNLLY
Trigger: GTATAGCAAGTTCAGCAGCAAATCTGACATTTGGGC...CTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GGCAATGTGTTCAGCAGTCTCACTGTTAGTAAATCTCTCATATGGCATCTTCCCGCCCAAATGTCAGATTaGCTGCTGAACTTGCTATAC +
Preference number: 5 (lower is better)
Translates to: GNVFSSLTVSKSLIWHLPAQMSD*LLNLLY
Trigger: GTATAGCAAGTTCAGCAGCAAATCTGACATTTGGGC...GGGAAGATGCCATATGAGAGATTTACTAACAGTGAGACTGCTGAACACATTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR CAA 90 bp GAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGCCCAAATGTCAGATTaGCTGCTGAACTTGCTATAC +
Preference number: 5 (lower is better)
Translates to: EISGTIISWPLLRSHYPRAQMSD*LLNLLY
Trigger: GTATAGCAAGTTCAGCAGCAAATCTGACATTTGGGC...CCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AACCAAGAAGCTTATTGGCGAGCTCAGGATTCTTCATCCATGACATCTAGAATAAGCTGTTGGACCCCTTaGTGCGGCTATTTACATCCT +
Preference number: 5 (lower is better)
Translates to: NQEAYWRAQDSSSMTSRISCWTP*CGYLHP
Trigger: AGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCT...TATTCTAGATGTCATGGATGAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR CAA 90 bp AACCAAGAAGCTTATTGGCGAGCTCAGGATTCTTCATCCATGACATCTAGAATAGACACCATTTCATTCTaGCCAAATTCGGTCCACCCC +
Preference number: 5 (lower is better)
Translates to: NQEAYWRAQDSSSMTSRIDTISF*PNSVHP
Trigger: GGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTC...TATTCTAGATGTCATGGATGAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS GCA 90 bp AAGGGATTCAGGACTTGTTGCATTAGGATTTGGAGGCTTGATATTTaGTTACGTTTTCTTGGCACGGTCACAAGAGTGTCACAAACACAC +
Preference number: 5 (lower is better)
Translates to: KGFRTCCIRIWRLDI*LRFLGTVTRVSQTH
Trigger: GTGTGTTTGTGACACTCTTGTGACCGTGCCAAGAAAACGTAAGCAAATATCAAGCCTCCAAATCCTAATGCAACAAGTCCTGAATCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488970.1
CDS-3UTR CAA 90 bp TTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAGAGGTGCATTCCCAGATGTGATCATTTGCATTCATaGGCATGTAATCATAAAGGG +
Preference number: 5 (lower is better)
Translates to: LLRSHYPRESKKRCIPRCDHLHS*ACNHKG
Trigger: CCCTTTATGATTACATGCCAATGAATGCAAATGATC...ACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CGGGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCGCAGCTGTAGATCATTaGCATTCATTGGCATGTAAT +
Preference number: 5 (lower is better)
Translates to: REISGTIISWPLLRSHYPAAVDH*HSLACN
Trigger: ATTACATGCCAATGAATGCAAATGATCTACAGCTGC...GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp CACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGAATCAAAGAAATAATTTCTTGGCCTTaGCTCAGAAGCCACTATCCC +
Preference number: 5 (lower is better)
Translates to: HNNFLAFAQKPLSQGIKEIISWP*LRSHYP
Trigger: GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTAT...TTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS GCA 90 bp TGTATTCATCATCCAGGACATACCTGCAAGGGATTCAGGACTTGTTaGATTAGGATTTGGAGGCTTGATATTTGCTTACGTTTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: CIHHPGHTCKGFRTC*IRIWRLDICLRFLG
Trigger: GCCAAGAAAACGTAAGCAAATATCAAGCCTCCAAATCCTAATGCAACAAGTCCTGAATCCCTTGCAGGTATGTCCTGGATGATGAATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488970.1
CDS-3UTR CAA 90 bp CGGGAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCGATCATTTGCATTCATaGGCATGTAATCATAAAGGG +
Preference number: 5 (lower is better)
Translates to: REISGTIISWPLLRSHYPDHLHS*ACNHKG
Trigger: CCCTTTATGATTACATGCCAATGAATGCAAATGATC...GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS GCA 90 bp AGTCATGTGTTTGGAATACCACTCATACATTTCTATGGAGTCTTCTaGTTCAGTGACATAGTTACTAGGAATGTAGCCTTCCTGCCCATT +
Preference number: 5 (lower is better)
Translates to: SHVFGIPLIHFYGVF*FSDIVTRNVAFLPI
Trigger: AATGGGCAGGAAGGCTACATTCCTAGTAACTATGTCACTGAAGCAGAAGACTCCATAGAAATGTATGAGTGGTATTCCAAACACATGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp GAAATTTCAGGCACAATAATTTCTTGGCCTTTGCTCAGAAGCCACTATCCCAGGGATCATTTGCATTCATaGGCATGTAATCATAAAGGG +
Preference number: 5 (lower is better)
Translates to: EISGTIISWPLLRSHYPRDHLHS*ACNHKG
Trigger: CCCTTTATGATTACATGCCAATGAATGCAAATGATC...CCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AACCAAGAAGCTTATTGGCGAGCTCAGGATTCTTCATCCATGACATCTAGAATACTCCACCATGGTAAGTaGCTTTCCTCCAAGATAAAA +
Preference number: 5 (lower is better)
Translates to: NQEAYWRAQDSSSMTSRILHHGK*LSSKIK
Trigger: TTTTATCTTGGAGGAAAGCAACTTACCATGGTGGAG...TATTCTAGATGTCATGGATGAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS-3UTR CAA 90 bp AATATTTTCATCGCAAATTCAGTCTGTCTTAATTCTCTCGGGAAATTTCAGGCATGGAGCCTACTGAGCTaGTGTATTCATCATCCAGGA +
Preference number: 5 (lower is better)
Translates to: NIFIANSVCLNSLGKFQAWSLLS*CIHHPG
Trigger: TCCTGGATGATGAATACACAAGCTCAGTAGGCTCCA...TGCCTGAAATTTCCCGAGAGAATTAAGACAGACTGAATTTGCGATGAAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS CCA 90 bp CTTGAAAGTTTAATTTTCTACATCTACCCCCAAATGCTACTGAGATaGTACACACCCATGATCACCACTATTCTCAACCAATATCTAAGG +
Preference number: 5 (lower is better)
Translates to: LESLIFYIYPQMLLR*YTPMITTILNQYLR
Trigger: CCTTAGATATTGGTTGAGAATAGTGGTGATCATGGGTGTGTACCATCTCAGTAGCATTTGGGGGTAGATGTAGAAAATTAAACTTTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470329.1
CDS-3UTR CAA 90 bp AATATTTTCATCGCAAATTCAGTCTGTCTTAATTCTCTCGGGAAATTTCAGGCAATAATTTCTTGGCCTTaGCTCAGAAGCCACTATCCC +
Preference number: 5 (lower is better)
Translates to: NIFIANSVCLNSLGKFQAIISWP*LRSHYP
Trigger: GGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTAT...TGCCTGAAATTTCCCGAGAGAATTAAGACAGACTGAATTTGCGATGAAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS-3UTR CAA 90 bp AATATTTTCATCGCAAATTCAGTCTGTCTTAATTCTCTCGGGAAATTTCAGGCAAGGCACAATAATTTCTaGGCCTTTGCTCAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: NIFIANSVCLNSLGKFQARHNNF*AFAQKP
Trigger: TGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCT...TGCCTGAAATTTCCCGAGAGAATTAAGACAGACTGAATTTGCGATGAAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS TCA 90 bp TATGAAGGAAAGAAGCTAAGATTCTTTATAACCAATATGGTAGAGTaGAGAATTTTTAAAGGAAACTTGACCGTGTTCCACGTTGCACAG +
Preference number: 5 (lower is better)
Translates to: YEGKKLRFFITNMVE*RIFKGNLTVFHVAQ
Trigger: CTGTGCAACGTGGAACACGGTCAAGTTTCCTTTAAAAATTCTTCACTCTACCATATTGGTTATAAAGAATCTTAGCTTCTTTCCTTCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464567.1
CDS-3UTR CAA 90 bp AATATTTTCATCGCAAATTCAGTCTGTCTTAATTCTCTCGGGAAATTTCAGGCAGATCATTTGCATTCATaGGCATGTAATCATAAAGGG +
Preference number: 5 (lower is better)
Translates to: NIFIANSVCLNSLGKFQADHLHS*ACNHKG
Trigger: CCCTTTATGATTACATGCCAATGAATGCAAATGATC...TGCCTGAAATTTCCCGAGAGAATTAAGACAGACTGAATTTGCGATGAAAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS CCA 72 bp CTTCCCAGATGCATTGAGATGCCAGGACTTGGAAGGTaGGACTCGATCGCAGCAGACACTGGCCCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: LPRCIEMPGLGR*DSIAADTGPGD
Trigger: GTCTCCAGGGCCAGTGTCTGCTGCGATCGAGTCCCACCTTCCAAGTCCTGGCATCTCAATGCATCTGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000372880.5
CDS CAA 72 bp GCAGGTAGCTTCCCAGATGCATTGAGATGCCAGGACTaGGAAGGTGGGACTCGATCGCAGCAGACACTGGCC +
Preference number: 6 (lower is better)
Translates to: AGSFPDALRCQD*EGGTRSQQTLA
Trigger: GGCCAGTGTCTGCTGCGATCGAGTCCCACCTTCCAAGTCCTGGCATCTCAATGCATCTGGGAAGCTACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000372880.5
CDS CCA 72 bp GTGACCTTGAGGTGGAACAGGAATGGAACGTGGAGGTaGAGGACCCCTTCATTCGACCCTAGTCCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: VTLRWNRNGTWR*RTPSFDPSPGF
Trigger: GAAGCCAGGACTAGGGTCGAATGAAGGGGTCCTCCACCTCCACGTTCCATTCCTGTTCCACCTCAAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS CCA 72 bp TTCCCAGTGACCTTGAGGTGGAACAGGAATGGAACGTaGAGGTGGAGGACCCCTTCATTCGACCCTAGTCCT +
Preference number: 6 (lower is better)
Translates to: FPVTLRWNRNGT*RWRTPSFDPSP
Trigger: AGGACTAGGGTCGAATGAAGGGGTCCTCCACCTCCACGTTCCATTCCTGTTCCACCTCAAGGTCACTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS CCA 72 bp AAAGGTGTTCCCAGTGACCTTGAGGTGGAACAGGAATaGAACGTGGAGGTGGAGGACCCCTTCATTCGACCC +
Preference number: 6 (lower is better)
Translates to: KGVPSDLEVEQE*NVEVEDPFIRP
Trigger: GGGTCGAATGAAGGGGTCCTCCACCTCCACGTTCCATTCCTGTTCCACCTCAAGGTCACTGGGAACACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS CCA 72 bp CTCTCCAGAATCACTGCGGCCATAGCTTCTTCTTTCTaGAGTTCACCTGTGTGCTCTCCCCCGGAACAGTGC +
Preference number: 6 (lower is better)
Translates to: LSRITAAIASSF*SSPVCSPPEQC
Trigger: GCACTGTTCCGGGGGAGAGCACACAGGTGAACTCCAGAAAGAAGAAGCTATGGCCGCAGTGATTCTGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS CCA 72 bp TGGAAGGTGGGACTCGATCGCAGCAGACACTGGCCCTaGAGACATATTCTTACAGTCCAGAGAGGAAGGACA +
Preference number: 6 (lower is better)
Translates to: WKVGLDRSRHWP*RHILTVQRGRT
Trigger: TGTCCTTCCTCTCTGGACTGTAAGAATATGTCTCCAGGGCCAGTGTCTGCTGCGATCGAGTCCCACCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000372880.5
CDS CCA 72 bp AGGACTTGGAAGGTGGGACTCGATCGCAGCAGACACTaGCCCTGGAGACATATTCTTACAGTCCAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: RTWKVGLDRSRH*PWRHILTVQRG
Trigger: TCCTCTCTGGACTGTAAGAATATGTCTCCAGGGCCAGTGTCTGCTGCGATCGAGTCCCACCTTCCAAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308731.8
ENST00000372880.5
CDS CAA 90 bp ACTCTGAAGGAACCAAATGATGGCCCCATGCCAGGAGCAGTCCCATaGGGAAGCACAGTCCCTTCTGTTCCAAATCCAGAATGGCCACTG +
Preference number: 6 (lower is better)
Translates to: TLKEPNDGPMPGAVP*GSTVPSVPNPEWPL
Trigger: CAGTGGCCATTCTGGATTTGGAACAGAAGGGACTGTGCTTCCCAATGGGACTGCTCCTGGCATGGGGCCATCATTTGGTTCCTTCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478995.1
CDS TCA 72 bp AGTCCTGACTTAATGCAGGTAGCTTCCCAGATGCATTaGGATGCCAGGACTTGGAAGGTGGGACTCGATCGC +
Preference number: 6 (lower is better)
Translates to: SPDLMQVASQMH*DARTWKVGLDR
Trigger: GCGATCGAGTCCCACCTTCCAAGTCCTGGCATCTCAATGCATCTGGGAAGCTACCTGCATTAAGTCAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000464567.1
CDS TCA 72 bp CGGTGGGGACCACCGGACTGGAAATTTGGAGCCTACTaGGCTTGTGTATTCATCATCCAGGACATACCTGGA +
Preference number: 6 (lower is better)
Translates to: RWGPPDWKFGAY*ACVFIIQDIPG
Trigger: TCCAGGTATGTCCTGGATGATGAATACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTGGTCCCCACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS TCA 72 bp CGGTGGGGACCACCGGACTGGAAATTTGGAGCCTACTaGGCTTGTGTATTCATCATCCAGGACATACCTGCA +
Preference number: 6 (lower is better)
Translates to: RWGPPDWKFGAY*ACVFIIQDIPA
Trigger: TGCAGGTATGTCCTGGATGATGAATACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTGGTCCCCACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488970.1
CDS TCA 72 bp GGCCAGAGGATCTGGGAAAAACACTGCTCCCTTCACTaGACGCCACTACGTAGCAGAGTCCACCAAAAGAGA +
Preference number: 6 (lower is better)
Translates to: GQRIWEKHCSLH*TPLRSRVHQKR
Trigger: TCTCTTTTGGTGGACTCTGCTACGTAGTGGCGTTCAGTGAAGGGAGCAGTGTTTTTCCCAGATCCTCTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS CAA 72 bp ATTAGCAGTTTGCTGCGAAAGGTGTTCCCAGTGACCTaGAGGTGGAACAGGAATGGAACGTGGAGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: ISSLLRKVFPVT*RWNRNGTWRWR
Trigger: CCTCCACCTCCACGTTCCATTCCTGTTCCACCTCAAGGTCACTGGGAACACCTTTCGCAGCAAACTGCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS GCA 72 bp TTCTGGAGTTCACCTGTGTGCTCTCCCCCGGAACAGTaGCTGCCACATAATGGGCATCCAATAACCATTTGT +
Preference number: 6 (lower is better)
Translates to: FWSSPVCSPPEQ*LPHNGHPITIC
Trigger: ACAAATGGTTATTGGATGCCCATTATGTGGCAGGCACTGTTCCGGGGGAGAGCACACAGGTGAACTCCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS CCA 72 bp AACCAAATGATGGCCCCATGCCAGGAGCAGTCCCATTaGGAAGCACAGTCCCTTCTGTTCCAAATCCAGAAT +
Preference number: 6 (lower is better)
Translates to: NQMMAPCQEQSH*EAQSLLFQIQN
Trigger: ATTCTGGATTTGGAACAGAAGGGACTGTGCTTCCCAATGGGACTGCTCCTGGCATGGGGCCATCATTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478995.1
CDS CAA 90 bp TCATTGGCATGTAATCATAAAGGGCCACAACCTTTTTCAGCTCACTaGTGGAGACTGGTGCTGCTGCTGGCTCAGGCGGTAGTGGCTTTT +
Preference number: 6 (lower is better)
Translates to: SLACNHKGPQPFSAH*WRLVLLLAQAVVAF
Trigger: AAAAGCCACTACCGCCTGAGCCAGCAGCAGCACCAGTCTCCACAAGTGAGCTGAAAAAGGTTGTGGCCCTTTATGATTACATGCCAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS CAA 90 bp TTGCTATACATCAGGACTTCCGGTGGGGACCACCGGACTGGAAATTaGGAGCCTACTGAGCTTGTGTATTCATCATCCAGGACATACCTG +
Preference number: 6 (lower is better)
Translates to: LLYIRTSGGDHRTGN*EPTELVYSSSRTYL
Trigger: CAGGTATGTCCTGGATGATGAATACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTGGTCCCCACCGGAAGTCCTGATGTATAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000488970.1
ENST00000621635.4
CDS CAA 90 bp CTTGCTATACATCAGGATTCCGGTGGGGACCACCGGACTGGAAATTaGGAGCCTACTGAGCTTGTGTATTCATCATCCAGGACATACCTG +
Preference number: 6 (lower is better)
Translates to: LAIHQDSGGDHRTGN*EPTELVYSSSRTYL
Trigger: CAGGTATGTCCTGGATGATGAATACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTGGTCCCCACCGGAATCCTGATGTATAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618050.4
CDS TCA 72 bp CCTTCTTTCCCCTCTTGCTTTAGCAGTTGCTCAGCCTaGCTCCGAGTCATGTGTTTGGAATACCACTCATAC +
Preference number: 6 (lower is better)
Translates to: PSFPSCFSSCSA*LRVMCLEYHSY
Trigger: GTATGAGTGGTATTCCAAACACATGACTCGGAGTCAGGCTGAGCAACTGCTAAAGCAAGAGGGGAAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS TCA 72 bp CCTGTTTCTTATGATCCAGTCCAGACTCACACAGCCTaGAAATGTGGTAGCTCTTCCTTAGGTGCCACTGGT +
Preference number: 6 (lower is better)
Translates to: PVSYDPVQTHTA*KCGSSSLGATG
Trigger: ACCAGTGGCACCTAAGGAAGAGCTACCACATTTTCAGGCTGTGTGAGTCTGGACTGGATCATAAGAAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372880.5
CDS CCA 72 bp GAGCCTTCTTTGATCATCTTGATGGCCACGTCGTACTaGCCTCTCCATTTCCCATACTTCACTACCCCAAAT +
Preference number: 6 (lower is better)
Translates to: EPSLIILMATSY*PLHFPYFTTPN
Trigger: ATTTGGGGTAGTGAAGTATGGGAAATGGAGAGGCCAGTACGACGTGGCCATCAAGATGATCAAAGAAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000470329.1
ENST00000618050.4
ENST00000621635.4
CDS TCA 72 bp AGATCACTGTTGTACCGGATTACGTTTTTGAGCTGGTaGATCCACCGCTTCCTTAGTTCTTCAGTTGGGGAG +
Preference number: 6 (lower is better)
Translates to: RSLLYRITFLSW*IHRFLSSSVGE
Trigger: CTCCCCAACTGAAGAACTAAGGAAGCGGTGGATTCACCAGCTCAAAAACGTAATCCGGTACAACAGTGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS TCA 72 bp ATGAACTGGAACAATTGGCTCCCTCCAGGTCTTCATTaGATTAGCAGTTTGCTGCGAAAGGTGTTCCCAGTG +
Preference number: 6 (lower is better)
Translates to: MNWNNWLPPGLH*ISSLLRKVFPV
Trigger: CACTGGGAACACCTTTCGCAGCAAACTGCTAATTCAATGAAGACCTGGAGGGAGCCAATTGTTCCAGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS TCA 72 bp CCATTTGTTGAATGGACCAACTGGCCATGTGATAGATaGACTGGAACAATTGGCTCCCTCCAGGTCTTCATT +
Preference number: 6 (lower is better)
Translates to: PFVEWTNWPCDR*TGTIGSLQVFI
Trigger: AATGAAGACCTGGAGGGAGCCAATTGTTCCAGTTCATCTATCACATGGCCAGTTGGTCCATTCAACAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621635.4
CDS CAA 90 bp ATACCTGCAAGGGATTCAGGACTTGTTGCATTAGGATTTGGAGGCTaGATATTTGCTTACGTTTTCTTGGCACGGTCACAAGAGTGTCAC +
Preference number: 6 (lower is better)
Translates to: IPARDSGLVALGFGG*IFAYVFLARSQECH
Trigger: GTGACACTCTTGTGACCGTGCCAAGAAAACGTAAGCAAATATCAAGCCTCCAAATCCTAATGCAACAAGTCCTGAATCCCTTGCAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488970.1
CDS GCA 72 bp CATCCAGGACATACCTGCAAGGGATTCAGGACTTGTTaGATTAGGATTTGGAGGCTTGATATTTGCTTACGT +
Preference number: 6 (lower is better)
Translates to: HPGHTCKGFRTC*IRIWRLDICLR
Trigger: ACGTAAGCAAATATCAAGCCTCCAAATCCTAATGCAACAAGTCCTGAATCCCTTGCAGGTATGTCCTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488970.1
CDS CCA 72 bp TGCAGTGGAAGGTGCATTCTTGTTTTGTTGAGACACTaGATATTTGAGCCTGGATATGAGTCCTGCAGAGTT +
Preference number: 6 (lower is better)
Translates to: CSGRCILVLLRH*IFEPGYESCRV
Trigger: AACTCTGCAGGACTCATATCCAGGCTCAAATATCCAGTGTCTCAACAAAACAAGAATGCACCTTCCACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000470329.1
ENST00000618050.4
ENST00000621635.4
CDS CAA 90 bp CTTGTTGCATTAGGATTTGGAGGCTTGATATTTGCTTACGTTTTCTaGGCACGGTCACAAGAGTGTCACAAACACACACAGGCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: LVALGFGGLIFAYVF*ARSQECHKHTQAFS
Trigger: TGAGAAAGCCTGTGTGTGTTTGTGACACTCTTGTGACCGTGCCAAGAAAACGTAAGCAAATATCAAGCCTCCAAATCCTAATGCAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488970.1
CDS GCA 72 bp AGGACTTGTTGCATTAGGATTTGGAGGCTTGATATTTaGTTACGTTTTCTTGGCACGGTCACAAGAGTGTCA +
Preference number: 6 (lower is better)
Translates to: RTCCIRIWRLDI*LRFLGTVTRVS
Trigger: TGACACTCTTGTGACCGTGCCAAGAAAACGTAAGCAAATATCAAGCCTCCAAATCCTAATGCAACAAGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488970.1
CDS CCA 72 bp AATTTCTTCAAATCTGCTGTTCCCCATCTCAGACATTaGTCTCTTCTTACCGGAATCTGTCTTTCTGGAGGA +
Preference number: 6 (lower is better)
Translates to: NFFKSAVPHLRH*SLLTGICLSGG
Trigger: TCCTCCAGAAAGACAGATTCCGGTAAGAAGAGACCAATGTCTGAGATGGGGAACAGCAGATTTGAAGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464567.1
CDS CAA 72 bp CATCACCCTTCCGCAGCTGTAGATCATTTGCATTCATaGGCATGTAATCATAAAGGGCCACAACCTTTTTCA +
Preference number: 6 (lower is better)
Translates to: HHPSAAVDHLHS*ACNHKGPQPFS
Trigger: TGAAAAAGGTTGTGGCCCTTTATGATTACATGCCAATGAATGCAAATGATCTACAGCTGCGGAAGGGTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308731.8
ENST00000372880.5
ENST00000618050.4
ENST00000621635.4
CDS CAA 72 bp TTAGGATTTGGAGGCTTGATATTTGCTTACGTTTTCTaGGCACGGTCACAAGAGTGTCACAAACACACACAG +
Preference number: 6 (lower is better)
Translates to: LGFGGLIFAYVF*ARSQECHKHTQ
Trigger: CTGTGTGTGTTTGTGACACTCTTGTGACCGTGCCAAGAAAACGTAAGCAAATATCAAGCCTCCAAATCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488970.1
CDS CCA 72 bp TTAATTTTCTACATCTACCCCCAAATGCTACTGAGATaGTACACACCCATGATCACCACTATTCTCAACCAA +
Preference number: 6 (lower is better)
Translates to: LIFYIYPQMLLR*YTPMITTILNQ
Trigger: TTGGTTGAGAATAGTGGTGATCATGGGTGTGTACCATCTCAGTAGCATTTGGGGGTAGATGTAGAAAATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470329.1