Pregenerated sensors for BTF3L4 (Homo sapiens)
Ensembl gene IDs: ENSG00000134717Ensembl transcript IDs: ENST00000313334.13, ENST00000477828.6
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGTGCTATACTGCCTATTATTTATCTGTCCCTAACCACTTGAAGTaGTTCCCCCTAACTCTGCCTCCACAATGTCCCCCTTTGGGACAA | + |
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Preference number: 1 (lower is better) Translates to: MCYTAYYLSVPNHLK*FPLTLPPQCPPLGQ Trigger: TTGTCCCAAAGGGGGACATTGTGGAGGCAGAGTTAGGGGGAACCACTTCAAGTGGTTAGGGACAGATAAATAATAGGCAGTATAGCACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR CCA 90 bp | CTGAACTGGAGTGTTGTTCAACACAGGTTGAAATGCAGTGTAGAATaGAGACTTTCTGTGCCTAGAACCATGAGCTTCGGAAAATCTAAG | + |
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Preference number: 1 (lower is better) Translates to: LNWSVVQHRLKCSVE*RLSVPRTMSFGKSK Trigger: CTTAGATTTTCCGAAGCTCATGGTTCTAGGCACAGAAAGTCTCCATTCTACACTGCATTTCAACCTGTGTTGAACAACACTCCAGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR TCA 90 bp | ACCCACACCAGAGGGAGGAACATGTCTTTGTGGAGAGGATTTCTTTaGGACTCTAAATATGCTTTGTTCAGGAAAGGGGAAGATACAAAA | + |
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Preference number: 1 (lower is better) Translates to: THTRGRNMSLWRGFL*DSKYALFRKGEDTK Trigger: TTTTGTATCTTCCCCTTTCCTGAACAAAGCATATTTAGAGTCTCAAAGAAATCCTCTCCACAAAGACATGTTCCTCCCTCTGGTGTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR CAA 90 bp | TCTTTCATGTGCTATACTGCCTATTATTTATCTGTCCCTAACCACTaGAAGTGGTTCCCCCTAACTCTGCCTCCACAATGTCCCCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SFMCYTAYYLSVPNH*KWFPLTLPPQCPPL Trigger: CAAAGGGGGACATTGTGGAGGCAGAGTTAGGGGGAACCACTTCAAGTGGTTAGGGACAGATAAATAATAGGCAGTATAGCACATGAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR-3UTR TCA 90 bp | GGAACATGTCTTTGTGGAGAGGATTTCTTTGAGACTCTAAATATGCTTTGTTCAATTTGTGCTGGGAGATaGGTCTATGGCCTATTTTCT | + |
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Preference number: 2 (lower is better) Translates to: GTCLCGEDFFETLNMLCSICAGR*VYGLFS Trigger: AGAAAATAGGCCATAGACTCATCTCCCAGCACAAAT...TGAACAAAGCATATTTAGAGTCTCAAAGAAATCCTCTCCACAAAGACATGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR GCA 72 bp | GGAGGTGGAGGTTGCAGTCAGCCGAGACCACAACATTaGAGTTCGGCCTGGACAACAAGAGCAAATCCCCAT | + |
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Preference number: 3 (lower is better) Translates to: GGGGCSQPRPQH*SSAWTTRANPH Trigger: ATGGGGATTTGCTCTTGTTGTCCAGGCCGAACTGCAATGTTGTGGTCTCGGCTGACTGCAACCTCCACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR-3UTR CAA 90 bp | CACTTGAAGTGGTTCCCCCTAACTCTGCCTCCACAATGTCCCCCTTTGGGACAAAAGTTGAAGATGAAGTaGTTCCTCAAGCTGAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: HLKWFPLTLPPQCPPLGQKLKMK*FLKLRE Trigger: TTCCCTCAGCTTGAGGAACAACTTCATCTTCAACTT...TTGTCCCAAAGGGGGACATTGTGGAGGCAGAGTTAGGGGGAACCACTTCAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR-3UTR CAA 90 bp | CACTTGAAGTGGTTCCCCCTAACTCTGCCTCCACAATGTCCCCCTTTGGGACAAGAAAAACAGGCATTTTaGTACCTGCTGTTAAGAACA | + |
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Preference number: 3 (lower is better) Translates to: HLKWFPLTLPPQCPPLGQEKQAF*YLLLRT Trigger: TGTTCTTAACAGCAGGTACAAAAATGCCTGTTTTTC...TTGTCCCAAAGGGGGACATTGTGGAGGCAGAGTTAGGGGGAACCACTTCAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR GCA 72 bp | AGGCTGAACTGGAGTGTTGTTCAACACAGGTTGAAATaGAGTGTAGAATGGAGACTTTCTGTGCCTAGAACC | + |
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Preference number: 3 (lower is better) Translates to: RLNWSVVQHRLK*SVEWRLSVPRT Trigger: GGTTCTAGGCACAGAAAGTCTCCATTCTACACTGCATTTCAACCTGTGTTGAACAACACTCCAGTTCAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR CCA 72 bp | AGTGTTGTTCAACACAGGTTGAAATGCAGTGTAGAATaGAGACTTTCTGTGCCTAGAACCATGAGCTTCGGA | + |
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Preference number: 3 (lower is better) Translates to: SVVQHRLKCSVE*RLSVPRTMSFG Trigger: TCCGAAGCTCATGGTTCTAGGCACAGAAAGTCTCCATTCTACACTGCATTTCAACCTGTGTTGAACAACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR CCA 72 bp | CATAATGCCAGAGTTTTGACTAGGACACAAGTCTCCTaGCTTCCAAGTGTGTGTTTTCTTTCATGTGCTATA | + |
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Preference number: 3 (lower is better) Translates to: HNARVLTRTQVS*LPSVCFLSCAI Trigger: TATAGCACATGAAAGAAAACACACACTTGGAAGCCAGGAGACTTGTGTCCTAGTCAAAACTCTGGCATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR CCA 72 bp | TGTGCTTTTCCCACTATAACATACTATCTCTTACCATaGTATCTTATTTATGGGTATGTAGCATACCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: CAFPTITYYLLP*YLIYGYVAYLG Trigger: CCCTAGGTATGCTACATACCCATAAATAAGATACCATGGTAAGAGATAGTATGTTATAGTGGGAAAAGCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR GCA 90 bp | CACTTGAAGTGGTTCCCCCTAACTCTGCCTCCACAATGTCCCCCTTTGGGACAATGGCTCCCGAAGTTGTaGACCGCAGCAGCCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: HLKWFPLTLPPQCPPLGQWLPKL*TAAALS Trigger: TGACAGGGCTGCTGCGGTGCACAACTTCGGGAGCCA...TTGTCCCAAAGGGGGACATTGTGGAGGCAGAGTTAGGGGGAACCACTTCAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR CAA 72 bp | GGGAGGTGGAGGTTGCAGTCAGCCGAGACCACAACATaGCAGTTCGGCCTGGACAACAAGAGCAAATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GRWRLQSAETTT*QFGLDNKSKSP Trigger: TGGGGATTTGCTCTTGTTGTCCAGGCCGAACTGCAATGTTGTGGTCTCGGCTGACTGCAACCTCCACCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR GCA 90 bp | CACTTGAAGTGGTTCCCCCTAACTCTGCCTCCACAATGTCCCCCTTTGGGACAACTGGGAGGTGGAGGTTaGAGTCAGCCGAGACCACAA | + |
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Preference number: 4 (lower is better) Translates to: HLKWFPLTLPPQCPPLGQLGGGG*SQPRPQ Trigger: TTGTGGTCTCGGCTGACTGCAACCTCCACCTCCCAG...TTGTCCCAAAGGGGGACATTGTGGAGGCAGAGTTAGGGGGAACCACTTCAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR TCA 90 bp | CACTTGAAGTGGTTCCCCCTAACTCTGCCTCCACAATGTCCCCCTTTGGGACAAGACAGGAGAATCGCTTaGATCTGGGAGGTGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: HLKWFPLTLPPQCPPLGQDRRIA*IWEVEV Trigger: AACCTCCACCTCCCAGATTCAAGCGATTCTCCTGTC...TTGTCCCAAAGGGGGACATTGTGGAGGCAGAGTTAGGGGGAACCACTTCAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CCA 90 bp | AGTCAGCCGAGACCACAACATTGCAGTTCGGCCTGGACAACAAGAGCAAATCCCAGGACACAAGTCTCCTaGCTTCCAAGTGTGTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: SQPRPQHCSSAWTTRANPRTQVS*LPSVCF Trigger: AAAACACACACTTGGAAGCCAGGAGACTTGTGTCCT...GGGATTTGCTCTTGTTGTCCAGGCCGAACTGCAATGTTGTGGTCTCGGCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR TCA 90 bp | ATCTGGGAGGTGGAGGTTGCAGTCAGCCGAGACCACAACATTGCAGTTCGGCCTTGGAGAGGATTTCTTTaGGACTCTAAATATGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: IWEVEVAVSRDHNIAVRPWRGFL*DSKYAL Trigger: CAAAGCATATTTAGAGTCTCAAAGAAATCCTCTCCA...AGGCCGAACTGCAATGTTGTGGTCTCGGCTGACTGCAACCTCCACCTCCCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR GCA 90 bp | CACTTGAAGTGGTTCCCCCTAACTCTGCCTCCACAATGTCCCCCTTTGGGACAACAACACAGGTTGAAATaGAGTGTAGAATGGAGACTT | + |
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Preference number: 4 (lower is better) Translates to: HLKWFPLTLPPQCPPLGQQHRLK*SVEWRL Trigger: AAGTCTCCATTCTACACTGCATTTCAACCTGTGTTG...TTGTCCCAAAGGGGGACATTGTGGAGGCAGAGTTAGGGGGAACCACTTCAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CCA 90 bp | CACTTGAAGTGGTTCCCCCTAACTCTGCCTCCACAATGTCCCCCTTTGGGACAAAAATGCAGTGTAGAATaGAGACTTTCTGTGCCTAGA | + |
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Preference number: 4 (lower is better) Translates to: HLKWFPLTLPPQCPPLGQKCSVE*RLSVPR Trigger: TCTAGGCACAGAAAGTCTCCATTCTACACTGCATTT...TTGTCCCAAAGGGGGACATTGTGGAGGCAGAGTTAGGGGGAACCACTTCAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR CAA 72 bp | ATTGTGTTGGGCAGAGATATGGGTAGAATATTCTCCTaGAGCCTGGTGCCACAGCTGAAGAGAATCAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: IVLGRDMGRIFS*SLVPQLKRIKD Trigger: GTCTTTGATTCTCTTCAGCTGTGGCACCAGGCTCAAGGAGAATATTCTACCCATATCTCTGCCCAACACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477828.6 |
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| 3UTR CAA 72 bp | TGCTATACTGCCTATTATTTATCTGTCCCTAACCACTaGAAGTGGTTCCCCCTAACTCTGCCTCCACAATGT | + |
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Preference number: 4 (lower is better) Translates to: CYTAYYLSVPNH*KWFPLTLPPQC Trigger: ACATTGTGGAGGCAGAGTTAGGGGGAACCACTTCAAGTGGTTAGGGACAGATAAATAATAGGCAGTATAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR CAA 72 bp | CAATACAGGCTGAACTGGAGTGTTGTTCAACACAGGTaGAAATGCAGTGTAGAATGGAGACTTTCTGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: QYRLNWSVVQHR*KCSVEWRLSVP Trigger: AGGCACAGAAAGTCTCCATTCTACACTGCATTTCAACCTGTGTTGAACAACACTCCAGTTCAGCCTGTATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR TCA 90 bp | TTCACTTTTGCAAAGATTGTGTTGGGCAGAGATATGGGTAGAATATTCTCCTTGGCCTGGTGCCACAGCTaGAGAGAATCAAAGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: FTFAKIVLGRDMGRIFSLAWCHS*RESKTS Trigger: TGAAGTCTTTGATTCTCTTCAGCTGTGGCACCAGGC...CAAGGAGAATATTCTACCCATATCTCTGCCCAACACAATCTTTGCAAAAGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477828.6 |
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| CDS-3UTR TCA 90 bp | GGAACATGTCTTTGTGGAGAGGATTTCTTTGAGACTCTAAATATGCTTTGTTCACTGTGCCTAGAACCATaGGCTTCGGAAAATCTAAGC | + |
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Preference number: 4 (lower is better) Translates to: GTCLCGEDFFETLNMLCSLCLEP*ASENLS Trigger: GCTTAGATTTTCCGAAGCTCATGGTTCTAGGCACAG...TGAACAAAGCATATTTAGAGTCTCAAAGAAATCCTCTCCACAAAGACATGTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CCA 90 bp | TCAAACAATTACTGCACTAACATTCATTTACAGGTGGAGGGTAGAGGAATAATACCTAACCACTTGAAGTaGTTCCCCCTAACTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SNNYCTNIHLQVEGRGIIPNHLK*FPLTLP Trigger: AGGCAGAGTTAGGGGGAACCACTTCAAGTGGTTAGG...TATTATTCCTCTACCCTCCACCTGTAAATGAATGTTAGTGCAGTAATTGTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CCA 90 bp | GGAACATGTCTTTGTGGAGAGGATTTCTTTGAGACTCTAAATATGCTTTGTTCAGGAAATTTAGGTAGCTaGCTCCTGTGTAATGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GTCLCGEDFFETLNMLCSGNLGS*LLCNGL Trigger: CAGCCCATTACACAGGAGCCAGCTACCTAAATTTCC...TGAACAAAGCATATTTAGAGTCTCAAAGAAATCCTCTCCACAAAGACATGTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR TCA 90 bp | GGAACATGTCTTTGTGGAGAGGATTTCTTTGAGACTCTAAATATGCTTTGTTCACATAGCAATACAGGCTaGACTGGAGTGTTGTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: GTCLCGEDFFETLNMLCSHSNTG*TGVLFN Trigger: GTTGAACAACACTCCAGTTCAGCCTGTATTGCTATG...TGAACAAAGCATATTTAGAGTCTCAAAGAAATCCTCTCCACAAAGACATGTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR GCA 90 bp | GGAACATGTCTTTGTGGAGAGGATTTCTTTGAGACTCTAAATATGCTTTGTTCAGAGCAAGGCCATCATTaGATTATTAATGGAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: GTCLCGEDFFETLNMLCSEQGHH*IINGGH Trigger: GTGTCCTCCATTAATAATGCAATGATGGCCTTGCTC...TGAACAAAGCATATTTAGAGTCTCAAAGAAATCCTCTCCACAAAGACATGTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CCA 90 bp | TCAAACAATTACTGCACTAACATTCATTTACAGGTGGAGGGTAGAGGAATAATACAATACAGGCTGAACTaGAGTGTTGTTCAACACAGG | + |
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Preference number: 4 (lower is better) Translates to: SNNYCTNIHLQVEGRGIIQYRLN*SVVQHR Trigger: CCTGTGTTGAACAACACTCCAGTTCAGCCTGTATTG...TATTATTCCTCTACCCTCCACCTGTAAATGAATGTTAGTGCAGTAATTGTTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CCA 90 bp | TTCACTTTTGCAAAGATTGTGTTGGGCAGAGATATGGGTAGAATATTCTCCTTGTTGCAAAGATTGTGTTaGGCAGAGATATGGGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: FTFAKIVLGRDMGRIFSLLQRLC*AEIWVE Trigger: TTCTACCCATATCTCTGCCCAACACAATCTTTGCAA...CAAGGAGAATATTCTACCCATATCTCTGCCCAACACAATCTTTGCAAAAGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477828.6 |
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| CDS-3UTR GCA 90 bp | TTCACTTTTGCAAAGATTGTGTTGGGCAGAGATATGGGTAGAATATTCTCCTTGATCAAAGACTTCAGTTaGTCACAACTAGTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: FTFAKIVLGRDMGRIFSLIKDFS*SQLVLP Trigger: AGGAAGAACTAGTTGTGAGCAACTGAAGTCTTTGAT...CAAGGAGAATATTCTACCCATATCTCTGCCCAACACAATCTTTGCAAAAGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477828.6 |
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| CDS-3UTR CCA 90 bp | GGAACATGTCTTTGTGGAGAGGATTTCTTTGAGACTCTAAATATGCTTTGTTCAATGGGCTGGAGAGAGTaGATCATAAACAAAACTATT | + |
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Preference number: 4 (lower is better) Translates to: GTCLCGEDFFETLNMLCSMGWRE*IINKTI Trigger: AATAGTTTTGTTTATGATCCACTCTCTCCAGCCCAT...TGAACAAAGCATATTTAGAGTCTCAAAGAAATCCTCTCCACAAAGACATGTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR GCA 90 bp | GGAACATGTCTTTGTGGAGAGGATTTCTTTGAGACTCTAAATATGCTTTGTTCATTTCATGTGCTATACTaGCTATTATTTATCTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: GTCLCGEDFFETLNMLCSFHVLY*LLFICP Trigger: GGGACAGATAAATAATAGGCAGTATAGCACATGAAA...TGAACAAAGCATATTTAGAGTCTCAAAGAAATCCTCTCCACAAAGACATGTTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CCA 90 bp | TCAAACAATTACTGCACTAACATTCATTTACAGGTGGAGGGTAGAGGAATAATACCCAACCATTTACTTTaGACTTGTCCAAAACAGATA | + |
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Preference number: 4 (lower is better) Translates to: SNNYCTNIHLQVEGRGIIPNHLL*TCPKQI Trigger: TATCTGTTTTGGACAAGTCCAAAGTAAATGGTTGGG...TATTATTCCTCTACCCTCCACCTGTAAATGAATGTTAGTGCAGTAATTGTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| 3UTR CAA 72 bp | AAAACAGATATAAGAGCCCAACCATTTACTTTGGACTaGTCCAAAACAGATAAGGCGCTTTACAAAGAACAA | + |
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Preference number: 4 (lower is better) Translates to: KTDIRAQPFTLD*SKTDKALYKEQ Trigger: TTGTTCTTTGTAAAGCGCCTTATCTGTTTTGGACAAGTCCAAAGTAAATGGTTGGGCTCTTATATCTGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR GCA 90 bp | TCAAACAATTACTGCACTAACATTCATTTACAGGTGGAGGGTAGAGGAATAATAGTAAATGTAAGGACATaGTCAGATAGGAAATTTAGG | + |
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Preference number: 4 (lower is better) Translates to: SNNYCTNIHLQVEGRGIIVNVRT*SDRKFR Trigger: CCTAAATTTCCTATCTGAGCATGTCCTTACATTTAC...TATTATTCCTCTACCCTCCACCTGTAAATGAATGTTAGTGCAGTAATTGTTTGA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CAA 90 bp | AGTCAGCCGAGACCACAACATTGCAGTTCGGCCTGGACAACAAGAGCAAATCCCTCTGGGAGGTGGAGGTaGCAGTCAGCCGAGACCACA | + |
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Preference number: 5 (lower is better) Translates to: SQPRPQHCSSAWTTRANPSGRWR*QSAETT Trigger: TGTGGTCTCGGCTGACTGCAACCTCCACCTCCCAGA...GGGATTTGCTCTTGTTGTCCAGGCCGAACTGCAATGTTGTGGTCTCGGCTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CAA 90 bp | AGTCAGCCGAGACCACAACATTGCAGTTCGGCCTGGACAACAAGAGCAAATCCCAGACAGGAGAATCGCTaGAATCTGGGAGGTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: SQPRPQHCSSAWTTRANPRQENR*NLGGGG Trigger: ACCTCCACCTCCCAGATTCAAGCGATTCTCCTGTCT...GGGATTTGCTCTTGTTGTCCAGGCCGAACTGCAATGTTGTGGTCTCGGCTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CAA 90 bp | ATCTGGGAGGTGGAGGTTGCAGTCAGCCGAGACCACAACATTGCAGTTCGGCCTCATAATGCCAGAGTTTaGACTAGGACACAAGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: IWEVEVAVSRDHNIAVRPHNARV*TRTQVS Trigger: GGAGACTTGTGTCCTAGTCAAAACTCTGGCATTATG...AGGCCGAACTGCAATGTTGTGGTCTCGGCTGACTGCAACCTCCACCTCCCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CAA 90 bp | ATCTGGGAGGTGGAGGTTGCAGTCAGCCGAGACCACAACATTGCAGTTCGGCCTAAGTTGAAGATGAAGTaGTTCCTCAAGCTGAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: IWEVEVAVSRDHNIAVRPKLKMK*FLKLRE Trigger: TTCCCTCAGCTTGAGGAACAACTTCATCTTCAACTT...AGGCCGAACTGCAATGTTGTGGTCTCGGCTGACTGCAACCTCCACCTCCCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CAA 90 bp | ATCTGGGAGGTGGAGGTTGCAGTCAGCCGAGACCACAACATTGCAGTTCGGCCTCCATTTACTTTGGACTaGTCCAAAACAGATAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: IWEVEVAVSRDHNIAVRPPFTLD*SKTDKA Trigger: CGCCTTATCTGTTTTGGACAAGTCCAAAGTAAATGG...AGGCCGAACTGCAATGTTGTGGTCTCGGCTGACTGCAACCTCCACCTCCCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CAA 90 bp | ATCTGGGAGGTGGAGGTTGCAGTCAGCCGAGACCACAACATTGCAGTTCGGCCTGTTGTTCAACACAGGTaGAAATGCAGTGTAGAATGG | + |
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Preference number: 5 (lower is better) Translates to: IWEVEVAVSRDHNIAVRPVVQHR*KCSVEW Trigger: CCATTCTACACTGCATTTCAACCTGTGTTGAACAAC...AGGCCGAACTGCAATGTTGTGGTCTCGGCTGACTGCAACCTCCACCTCCCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CAA 90 bp | AGTCAGCCGAGACCACAACATTGCAGTTCGGCCTGGACAACAAGAGCAAATCCCCCACAATGTCCCCCTTaGGGACAATTAGAGAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: SQPRPQHCSSAWTTRANPPQCPP*GQLEKE Trigger: TTCTTTCTCTAATTGTCCCAAAGGGGGACATTGTGG...GGGATTTGCTCTTGTTGTCCAGGCCGAACTGCAATGTTGTGGTCTCGGCTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CAA 90 bp | CACTTGAAGTGGTTCCCCCTAACTCTGCCTCCACAATGTCCCCCTTTGGGACAAAAGAATATTGGCTCATaGTACACAAGAGAGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: HLKWFPLTLPPQCPPLGQKNIGS*YTREAS Trigger: GCTGGCCTCTCTTGTGTACAATGAGCCAATATTCTT...TTGTCCCAAAGGGGGACATTGTGGAGGCAGAGTTAGGGGGAACCACTTCAAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CAA 90 bp | ATCTGGGAGGTGGAGGTTGCAGTCAGCCGAGACCACAACATTGCAGTTCGGCCTGAAAAACAGGCATTTTaGTACCTGCTGTTAAGAACA | + |
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Preference number: 5 (lower is better) Translates to: IWEVEVAVSRDHNIAVRPEKQAF*YLLLRT Trigger: TGTTCTTAACAGCAGGTACAAAAATGCCTGTTTTTC...AGGCCGAACTGCAATGTTGTGGTCTCGGCTGACTGCAACCTCCACCTCCCAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CAA 90 bp | CACTTGAAGTGGTTCCCCCTAACTCTGCCTCCACAATGTCCCCCTTTGGGACAAGCCCAACCATTTACTTaGGACTTGTCCAAAACAGAT | + |
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Preference number: 5 (lower is better) Translates to: HLKWFPLTLPPQCPPLGQAQPFT*DLSKTD Trigger: ATCTGTTTTGGACAAGTCCAAAGTAAATGGTTGGGC...TTGTCCCAAAGGGGGACATTGTGGAGGCAGAGTTAGGGGGAACCACTTCAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CAA 90 bp | TTCACTTTTGCAAAGATTGTGTTGGGCAGAGATATGGGTAGAATATTCTCCTTGGGTAGAATATTCTCCTaGAGCCTGGTGCCACAGCTG | + |
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Preference number: 5 (lower is better) Translates to: FTFAKIVLGRDMGRIFSLGRIFS*SLVPQL Trigger: CAGCTGTGGCACCAGGCTCAAGGAGAATATTCTACC...CAAGGAGAATATTCTACCCATATCTCTGCCCAACACAATCTTTGCAAAAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477828.6 |
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| CDS-3UTR CAA 90 bp | TCAAACAATTACTGCACTAACATTCATTTACAGGTGGAGGGTAGAGGAATAATATCTGTCCCTAACCACTaGAAGTGGTTCCCCCTAACT | + |
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Preference number: 5 (lower is better) Translates to: SNNYCTNIHLQVEGRGIISVPNH*KWFPLT Trigger: AGTTAGGGGGAACCACTTCAAGTGGTTAGGGACAGA...TATTATTCCTCTACCCTCCACCTGTAAATGAATGTTAGTGCAGTAATTGTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS-3UTR CAA 90 bp | TTCACTTTTGCAAAGATTGTGTTGGGCAGAGATATGGGTAGAATATTCTCCTTGTTTGCAAAGATTGTGTaGGGCAGAGATATGGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: FTFAKIVLGRDMGRIFSLFAKIV*GRDMGR Trigger: TCTACCCATATCTCTGCCCAACACAATCTTTGCAAA...CAAGGAGAATATTCTACCCATATCTCTGCCCAACACAATCTTTGCAAAAGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477828.6 |
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| CDS-3UTR CAA 90 bp | TTCACTTTTGCAAAGATTGTGTTGGGCAGAGATATGGGTAGAATATTCTCCTTGTCACTTTTGCAAAGATaGTGTTGGGCAGAGATATGG | + |
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Preference number: 5 (lower is better) Translates to: FTFAKIVLGRDMGRIFSLSLLQR*CWAEIW Trigger: CCATATCTCTGCCCAACACAATCTTTGCAAAAGTGA...CAAGGAGAATATTCTACCCATATCTCTGCCCAACACAATCTTTGCAAAAGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477828.6 |
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| CDS-3UTR CAA 90 bp | TTCACTTTTGCAAAGATTGTGTTGGGCAGAGATATGGGTAGAATATTCTCCTTGAATCAAAGACTTCAGTaGCTCACAACTAGTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: FTFAKIVLGRDMGRIFSLNQRLQ*LTTSSS Trigger: GGAAGAACTAGTTGTGAGCAACTGAAGTCTTTGATT...CAAGGAGAATATTCTACCCATATCTCTGCCCAACACAATCTTTGCAAAAGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477828.6 |
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| CDS-3UTR CAA 90 bp | GGAACATGTCTTTGTGGAGAGGATTTCTTTGAGACTCTAAATATGCTTTGTTCAGACTCTAAATATGCTTaGTTCAGGAAAGGGGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: GTCLCGEDFFETLNMLCSDSKYA*FRKGED Trigger: ATCTTCCCCTTTCCTGAACAAAGCATATTTAGAGTC...TGAACAAAGCATATTTAGAGTCTCAAAGAAATCCTCTCCACAAAGACATGTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313334.13 |
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| CDS CAA 90 bp | CTCCTTGAGCCTGGTGCCACAGCTGAAGAGAATCAAAGACTTCAGTaGCTCACAACTAGTTCTTCCTTAGGCTTTAAAAAGTACAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LLEPGATAEENQRLQ*LTTSSSLGFKKYRE Trigger: TTCCCTGTACTTTTTAAAGCCTAAGGAAGAACTAGTTGTGAGCAACTGAAGTCTTTGATTCTCTTCAGCTGTGGCACCAGGCTCAAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477828.6 |
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| CDS CAA 90 bp | TTTGCAAAGATTGTGTTGGGCAGAGATATGGGTAGAATATTCTCCTaGAGCCTGGTGCCACAGCTGAAGAGAATCAAAGACTTCAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: FAKIVLGRDMGRIFS*SLVPQLKRIKDFSC Trigger: GCAACTGAAGTCTTTGATTCTCTTCAGCTGTGGCACCAGGCTCAAGGAGAATATTCTACCCATATCTCTGCCCAACACAATCTTTGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477828.6 |
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