Pregenerated sensors for BTF3-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272525Ensembl transcript IDs: ENST00000607001.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTCTGCAATTCTCCAACCCACACCTCCAGCAAGGGGAGAGCTGCTTaGGTGGTGAGCACAAGCTGGGCACCTCCGGCGTCTCCAGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FCNSPTHTSSKGRAA*VVSTSWAPPASPGN Trigger: GTTTCCTGGAGACGCCGGAGGTGCCCAGCTTGTGCTCACCACTCAAGCAGCTCTCCCCTTGCTGGAGGTGTGGGTTGGAGAATTGCAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607001.1 |
||
| CDS GCA 90 bp | GAAATTCTGCAATTCTCCAACCCACACCTCCAGCAAGGGGAGAGCTaGTTGAGTGGTGAGCACAAGCTGGGCACCTCCGGCGTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EILQFSNPHLQQGES*LSGEHKLGTSGVSR Trigger: CCTGGAGACGCCGGAGGTGCCCAGCTTGTGCTCACCACTCAAGCAGCTCTCCCCTTGCTGGAGGTGTGGGTTGGAGAATTGCAGAATTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607001.1 |
||
| CDS CCA 90 bp | CGGATTACCCAGTTCCTTCGTCGTACAGAGTTGCATTCTGAGGAGTaGGGCTCGGGGATACAGCCCCCAGAAATTCTGAACCTCGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RITQFLRRTELHSEE*GSGIQPPEILNLGP Trigger: GGGACCGAGGTTCAGAATTTCTGGGGGCTGTATCCCCGAGCCCCACTCCTCAGAATGCAACTCTGTACGACGAAGGAACTGGGTAATCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000607001.1 |
||
| CDS GCA 90 bp | GTGGACCGTTTTAAGGTGGTTAGTCATCTGCTAAATTGGCTGAAATaGGGATTACCCAGTTCCTTCGTCGTACAGAGTTGCATTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VDRFKVVSHLLNWLK*GLPSSFVVQSCILR Trigger: CCTCAGAATGCAACTCTGTACGACGAAGGAACTGGGTAATCCGCATTTCAGCCAATTTAGCAGATGACTAACCACCTTAAAACGGTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607001.1 |
||
| CDS CCA 90 bp | GATAATTGTGTGGACCGTTTTAAGGTGGTTAGTCATCTGCTAAATTaGCTGAAATGCGGATTACCCAGTTCCTTCGTCGTACAGAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DNCVDRFKVVSHLLN*LKCGLPSSFVVQSC Trigger: GCAACTCTGTACGACGAAGGAACTGGGTAATCCGCATTTCAGCCAATTTAGCAGATGACTAACCACCTTAAAACGGTCCACACAATTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607001.1 |
||
| CDS TCA 72 bp | GGGCACAGAACTTCAGGATCAGGGCCCAATGGAGACTaGGCGGACTTAACCCTAACTGTGCACAGGACCGCG | + |
|
Preference number: 6 (lower is better) Translates to: GHRTSGSGPNGD*ADLTLTVHRTA Trigger: CGCGGTCCTGTGCACAGTTAGGGTTAAGTCCGCTCAGTCTCCATTGGGCCCTGATCCTGAAGTTCTGTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607001.1 |
||
| CDS TCA 72 bp | GCACAAGCTGGGCACCTCCGGCGTCTCCAGGAAACGTaGATAGGCCCTTTCTTCGGAGGGCACAGAACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: AQAGHLRRLQET*IGPFFGGHRTS Trigger: TGAAGTTCTGTGCCCTCCGAAGAAAGGGCCTATTCACGTTTCCTGGAGACGCCGGAGGTGCCCAGCTTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607001.1 |
||
| CDS GCA 72 bp | AAATGCGGATTACCCAGTTCCTTCGTCGTACAGAGTTaGATTCTGAGGAGTGGGGCTCGGGGATACAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: KCGLPSSFVVQS*ILRSGARGYSP Trigger: GGGGCTGTATCCCCGAGCCCCACTCCTCAGAATGCAACTCTGTACGACGAAGGAACTGGGTAATCCGCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607001.1 |
||
| CDS CAA 72 bp | GAAATGCGGATTACCCAGTTCCTTCGTCGTACAGAGTaGCATTCTGAGGAGTGGGGCTCGGGGATACAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EMRITQFLRRTE*HSEEWGSGIQP Trigger: GGGCTGTATCCCCGAGCCCCACTCCTCAGAATGCAACTCTGTACGACGAAGGAACTGGGTAATCCGCATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607001.1 |
||
| CDS CCA 72 bp | CAGTTCCTTCGTCGTACAGAGTTGCATTCTGAGGAGTaGGGCTCGGGGATACAGCCCCCAGAAATTCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QFLRRTELHSEE*GSGIQPPEILN Trigger: GTTCAGAATTTCTGGGGGCTGTATCCCCGAGCCCCACTCCTCAGAATGCAACTCTGTACGACGAAGGAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000607001.1 |
||
| CDS GCA 72 bp | TTTGGTAATGGCTCATTCGGGCCGAGAGGGAAATTCTaGAATTCTCCAACCCACACCTCCAGCAAGGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: FGNGSFGPRGKF*NSPTHTSSKGR Trigger: TCTCCCCTTGCTGGAGGTGTGGGTTGGAGAATTGCAGAATTTCCCTCTCGGCCCGAATGAGCCATTACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607001.1 |
||
| CDS GCA 72 bp | TTTAAGGTGGTTAGTCATCTGCTAAATTGGCTGAAATaGGGATTACCCAGTTCCTTCGTCGTACAGAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: FKVVSHLLNWLK*GLPSSFVVQSC Trigger: GCAACTCTGTACGACGAAGGAACTGGGTAATCCGCATTTCAGCCAATTTAGCAGATGACTAACCACCTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607001.1 |
||