RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BTBD9 (Homo sapiens)

Ensembl gene IDs: ENSG00000183826

Ensembl transcript IDs: ENST00000314100.10, ENST00000328403.10, ENST00000403056.2, ENST00000408958.5, ENST00000419706.6, ENST00000481247.6, ENST00000497373.1, ENST00000498633.1, ENST00000649492.1

Found 1317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTaGCGTTGCCCGAGCCCACCAAGTCACACCAGGCCCGCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: GGSQQRPLLREETVS*RCPSPPSHTRPAAS
Trigger: GGAGGCAGCGGGCCTGGTGTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp AACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTaGCCTGCCCGGGCCGTGCCCGACCTGGGCATCGCTCGGAGGAGC +
Preference number: 1 (lower is better)
Translates to: NKWSMPTSATASLQT*PARAVPDLGIARRS
Trigger: GCTCCTCCGAGCGATGCCCAGGTCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 90 bp AGCAGCTCAGCCCTGCAGCTGGAGCTACCGGGGAGGATGGAGAGCTaGAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGG +
Preference number: 1 (lower is better)
Translates to: SSSALQLELPGRMES*RPWLLLRNVSTLPR
Trigger: CCGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCTCCAGCTGCAGGGCTGAGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTaGAGACCTGCCCTGCCCGGGCCGTGCCCGACCTGGGCATCGCTC +
Preference number: 1 (lower is better)
Translates to: AAKTNGVCPPLPRHR*RPALPGPCPTWASL
Trigger: GAGCGATGCCCAGGTCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp CCACCAGGGCAGCACCAGGAGGCAAAGGCCCTGAGGGAGATGAGCTaGTGCCGTCCCCTCCCAATTCCGCTCAGATGGGCACCCTCGCCT +
Preference number: 1 (lower is better)
Translates to: PPGQHQEAKALREMS*CRPLPIPLRWAPSP
Trigger: AGGCGAGGGTGCCCATCTGAGCGGAATTGGGAGGGGACGGCACCAGCTCATCTCCCTCAGGGCCTTTGCCTCCTGGTGCTGCCCTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 90 bp CTGGAAGGCCGTGGGGCTTGGGGCCAGCACTGTGCAAAGGATGGGTaGGCACGCTGTCCCTCGGAGCGTCCTCAGTGGTGCAGCCAAGAG +
Preference number: 1 (lower is better)
Translates to: LEGRGAWGQHCAKDG*ARCPSERPQWCSQE
Trigger: CTCTTGGCTGCACCACTGAGGACGCTCCGAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGCTGGCCCCAAGCCCCACGGCCTTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp CCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTaGGGAGACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGC +
Preference number: 1 (lower is better)
Translates to: PKTQGLQCCSRAMPS*GDSQADADGDRGRS
Trigger: GCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp CTAGCTGGAAGGCCGTGGGGCTTGGGGCCAGCACTGTGCAAAGGATaGGTGAGCACGCTGTCCCTCGGAGCGTCCTCAGTGGTGCAGCCA +
Preference number: 1 (lower is better)
Translates to: LAGRPWGLGPALCKG*VSTLSLGASSVVQP
Trigger: TGGCTGCACCACTGAGGACGCTCCGAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGCTGGCCCCAAGCCCCACGGCCTTCCAGCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp CACGAAGCTGATGGGGCAGGAGGGCCGTTCAGCCTGGCTTCTGACTaGAAGCTCGCTGGGTGCAGCAGACTGGCCTGGGAGATGCCAGGG +
Preference number: 1 (lower is better)
Translates to: HEADGAGGPFSLASD*KLAGCSRLAWEMPG
Trigger: CCCTGGCATCTCCCAGGCCAGTCTGCTGCACCCAGCGAGCTTCCAGTCAGAAGCCAGGCTGAACGGCCCTCCTGCCCCATCAGCTTCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp TGCGCCAGGGCCAGGGCCTCTCCCCCTAGTGGAGCGACTGTCCACTaGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGAC +
Preference number: 1 (lower is better)
Translates to: CARARASPPSGATVH*LSKAALLSCHSRSD
Trigger: GTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGGCCCTGGCCCTGGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 90 bp GGTTGGCGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATaGCGTCCTGGGGAGACTCCCAGGCTGATGCTGATGGCGACAGAG +
Preference number: 1 (lower is better)
Translates to: GWRRRPKDCSAAHVP*RPGETPRLMLMATE
Trigger: CTCTGTCGCCATCAGCATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTGCAGTGCTaGTCACGTGCCATGCCGTCCTGGGGAGACTCCCAGGCTGATGCT +
Preference number: 1 (lower is better)
Translates to: DQGCRLAPKTQGLQC*SRAMPSWGDSQADA
Trigger: AGCATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp CCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTaGAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGACTCCCAGG +
Preference number: 1 (lower is better)
Translates to: PPLIRVAGWRRRPKD*SAAHVPCRPGETPR
Trigger: CCTGGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp TTGGAGTCCAGGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTaGCAGCGCGGCTGTGAGGGAATGAGACTTTGCCATCAGTCCTCA +
Preference number: 1 (lower is better)
Translates to: LESRAGSQQSEGEAS*QRGCEGMRLCHQSS
Trigger: TGAGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCCTGGACTCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp CCTTACTGGCAGCACCCTGCCCTGCTGACCCTGGAAGCAGCTGATTaGGGGGCCTGGGAAGACCCCATGGCCTCCAGCAGGTCTCAGAAT +
Preference number: 1 (lower is better)
Translates to: PYWQHPALLTLEAAD*GAWEDPMASSRSQN
Trigger: ATTCTGAGACCTGCTGGAGGCCATGGGGTCTTCCCAGGCCCCTCAATCAGCTGCTTCCAGGGTCAGCAGGGCAGGGTGCTGCCAGTAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 90 bp AATCAATGGCTGCAGCTGCCAAAACAAATGGAGTATGCCCACCTCTaGCACGGCATCGCTGCAGACCTGCCCTGCCCGGGCCGTGCCCGA +
Preference number: 1 (lower is better)
Translates to: NQWLQLPKQMEYAHL*HGIAADLPCPGRAR
Trigger: TCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGCTGCAGCCATTGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 90 bp TCCTCCCTGATGGAAGCCAGAGACCTACCACAAACAAAGACCTGCTaGCTCCGCCCCTCCTCCCTCCGCCTCGCCTCTGCAACCGGTCTT +
Preference number: 1 (lower is better)
Translates to: SSLMEARDLPQTKTC*LRPSSLRLASATGL
Trigger: AAGACCGGTTGCAGAGGCGAGGCGGAGGGAGGAGGGGCGGAGGCAGCAGGTCTTTGTTTGTGGTAGGTCTCTGGCTTCCATCAGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 90 bp TTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTGCAGTaGTGCTCACGTGCCATGCCGTCCTGGGGAGACTCCCAGGCTGAT +
Preference number: 1 (lower is better)
Translates to: FDQGCRLAPKTQGLQ*CSRAMPSWGDSQAD
Trigger: ATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp TGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTaGCCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGA +
Preference number: 1 (lower is better)
Translates to: WRAADPGFSSGTCPP*PGSPLMSAILCSHG
Trigger: TCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGAGGCCGAGCTaGCAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGT +
Preference number: 1 (lower is better)
Translates to: GRGFAAYSFSDARPS*QAAISFPEHRRALR
Trigger: ACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp AGGAAACTCCCACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTaGCGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGC +
Preference number: 1 (lower is better)
Translates to: RKLPRPHPPLIRVAG*RRRPKDCSAAHVPC
Trigger: GCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGTGGGAGTTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp AGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTaGGGGAATGAGACTTTGCCATCAGTCCTCACCAATGACATCTAC +
Preference number: 1 (lower is better)
Translates to: RLPAKRGGGELAARL*GNETLPSVLTNDIY
Trigger: GTAGATGTCATTGGTGAGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GGAAGGGCATGCCCCGAAGGAAAGAACCGCCACAGGCCAGGGAGCTaGAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTT +
Preference number: 1 (lower is better)
Translates to: GRACPEGKNRHRPGS*RCGSRAEALQRIPF
Trigger: AAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCCTGGCCTGTGGCGGTTCTTTCCTTCGGGGCATGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GTCACAGAGCCATTCCCAACCCAGGCCTGGCATGGTCCCTGCCCTTaGATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAG +
Preference number: 1 (lower is better)
Translates to: VTEPFPTQAWHGPCP*IRVAWEVHTSLQAQ
Trigger: CTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTTGGGAATGGCTCTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp TTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGTGTCCTTTCCATTaGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCAC +
Preference number: 1 (lower is better)
Translates to: FAWVVVTMAPLCPFH*LLRTIALMGPGHRH
Trigger: GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGGACACAAGGGCGCCATGGTCACCACCACCCAGGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp CCAACCCAGGCCTGGCATGGTCCCTGCCCTTGCATCAGAGTGGCCTaGGAGGTACACACATCTTTACAGGCCCAGAAACGCCAAAGGCTG +
Preference number: 1 (lower is better)
Translates to: PTQAWHGPCPCIRVA*EVHTSLQAQKRQRL
Trigger: CAGCCTTTGGCGTTTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp TTAGACGGAGCTTCTGGAGTCACAGAGCCATTCCCAACCCAGGCCTaGCATGGTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACAC +
Preference number: 1 (lower is better)
Translates to: LDGASGVTEPFPTQA*HGPCPCIRVAWEVH
Trigger: GTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTTGGGAATGGCTCTGTGACTCCAGAAGCTCCGTCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 90 bp TGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGGTGTaGCACACCTTGACTTGGCCTCCAGGCCCAGCTGGACACACGAAA +
Preference number: 1 (lower is better)
Translates to: CPCSLEMRSLPWCVV*HTLTWPPGPAGHTK
Trigger: TTTCGTGTGTCCAGCTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp GGTGCAGCCAAGAGCCAGGAAGGGCACAGCCTCTTTCCTCCTCCCTaGTGGAAGCCAGAGACCTACCACAAACAAAGACCTGCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: GAAKSQEGHSLFPPP*WKPETYHKQRPAAS
Trigger: GGAGGCAGCAGGTCTTTGTTTGTGGTAGGTCTCTGGCTTCCATCAGGGAGGAGGAAAGAGGCTGTGCCCTTCCTGGCTCTTGGCTGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 90 bp GCGGGCGCCCACCGTTCCTTACAGGAGCCTCCTCCCATTATGAAATaGCTGGCATCCCAGGAGTGTTCCACTCTCCCACACAACAGGGAA +
Preference number: 1 (lower is better)
Translates to: AGAHRSLQEPPPIMK*LASQECSTLPHNRE
Trigger: TTCCCTGTTGTGTGGGAGAGTGGAACACTCCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCTCCTGTAAGGAACGGTGGGCGCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp CTTTGCAGCGTATTCCTTTTCAGATGCGAGGCCGAGCTGCCAAGCTaGTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTG +
Preference number: 1 (lower is better)
Translates to: LCSVFLFRCEAELPS*YLVPGAQEGSACSV
Trigger: CACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATACGCTGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATaGGAGGCCGAGCTGCCAAGCTGCTATCTCGTTCCCGGAGCACAG +
Preference number: 1 (lower is better)
Translates to: DVGLGPRLCSVFLFR*EAELPSCYLVPGAQ
Trigger: CTGTGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGGAATGAGACTTTaGCATCAGTCCTCACCAATGACATCTACTGTTAGTGCCACCCCA +
Preference number: 1 (lower is better)
Translates to: EGEASWQRGCEGMRL*HQSSPMTSTVSATP
Trigger: TGGGGTGGCACTAACAGTAGATGTCATTGGTGAGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp GAAGCACGGAGTCCCAGTTCTGCGTTCCTGACGCTGATGGGCAGGTaGCTGCCTCTCCAATGCTTCGATAAACACAACTGGAGGGGCAGC +
Preference number: 1 (lower is better)
Translates to: EARSPSSAFLTLMGR*LPLQCFDKHNWRGS
Trigger: GCTGCCCCTCCAGTTGTGTTTATCGAAGCATTGGAGAGGCAGCCACCTGCCCATCAGCGTCAGGAACGCAGAACTGGGACTCCGTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp GCAAATGACCAGGGCCTCCAAATCCCGTCCAGCCCCAGGTATGACTaGATCCGTGTCAGCGAGAGAGATGGGGGCATTCCAGTTGTCCTG +
Preference number: 1 (lower is better)
Translates to: ANDQGLQIPSSPRYD*IRVSERDGGIPVVL
Trigger: CAGGACAACTGGAATGCCCCCATCTCTCTCGCTGACACGGATCCAGTCATACCTGGGGCTGGACGGGATTTGGAGGCCCTGGTCATTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 90 bp TGTGAGCGGGCGCCCACCGTTCCTTACAGGAGCCTCCTCCCATTATaGAATGCCTGGCATCCCAGGAGTGTTCCACTCTCCCACACAACA +
Preference number: 1 (lower is better)
Translates to: CERAPTVPYRSLLPL*NAWHPRSVPLSHTT
Trigger: TGTTGTGTGGGAGAGTGGAACACTCCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCTCCTGTAAGGAACGGTGGGCGCCCGCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp CATTCCCAACCCAGGCCTGGCATGGTCCCTGCCCTTGCATCAGAGTaGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAACGCCAAA +
Preference number: 1 (lower is better)
Translates to: HSQPRPGMVPALASE*PGRYTHLYRPRNAK
Trigger: TTTGGCGTTTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTTGGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 90 bp TCTTTGACACACCTGAAAGGAAACTCCCACGCCCTCACCCTCCTTTaGTCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTGCAGTG +
Preference number: 1 (lower is better)
Translates to: SLTHLKGNSHALTLL*SGLQVGAEDPRTAV
Trigger: CACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGTGGGAGTTTCCTTTCAGGTGTGTCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp CTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGTAGCCCTCTaGTGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCAAT +
Preference number: 1 (lower is better)
Translates to: LASPQERVHPAPVAL*CLPSCVHTERQSSN
Trigger: ATTGGAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp AAATATGCAGAATCAATGGCTGCAGCTGCCAAAACAAATGGAGTATaGCCACCTCTGCCACGGCATCGCTGCAGACCTGCCCTGCCCGGG +
Preference number: 1 (lower is better)
Translates to: KYAESMAAAAKTNGV*PPLPRHRCRPALPG
Trigger: CCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGCTGCAGCCATTGATTCTGCATATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp ACACAACTGGAGGGGCAGCTAAGCCACGGCAGTCCCCGGCAGGTTTaGCCACGCCAGAACTCGGTATATGTTTATCTACATGGACTTCGG +
Preference number: 1 (lower is better)
Translates to: TQLEGQLSHGSPRQV*PRQNSVYVYLHGLR
Trigger: CCGAAGTCCATGTAGATAAACATATACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTGCCGTGGCTTAGCTGCCCCTCCAGTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp TACAGGCCCAGAAACGCCAAAGGCTGGGAGGCTCTTGTTCTCTGGTaGATCCGGATTCAAGACAGGCTTCGCAAAAGCAGCTCTTGGGCC +
Preference number: 1 (lower is better)
Translates to: YRPRNAKGWEALVLW*IRIQDRLRKSSSWA
Trigger: GGCCCAAGAGCTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCCCAGCCTTTGGCGTTTCTGGGCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp GCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATaGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCATCG +
Preference number: 1 (lower is better)
Translates to: AGNVVRSYPGQAALE*KSLSRRRSHIKPPS
Trigger: CGATGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp ACTAGGAGGAAGCGGCTGACCCGTTGGCTCTTTCTAGAGCGCAGCTaGTATGTCTTTGACACACCTGAAAGGAAACTCCCACGCCCTCAC +
Preference number: 1 (lower is better)
Translates to: TRRKRLTRWLFLERS*YVFDTPERKLPRPH
Trigger: GTGAGGGCGTGGGAGTTTCCTTTCAGGTGTGTCAAAGACATATCAGCTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTTCCTCCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GTGCATTTGTGGCACTTCCTCTGTGGCCCAAGTGCCAGGATGAGCTaGATCCGTGTCTCATTTAGGAGACATGCACGATGGGTCTCTGTC +
Preference number: 1 (lower is better)
Translates to: VHLWHFLCGPSARMS*IRVSFRRHARWVSV
Trigger: GACAGAGACCCATCGTGCATGTCTCCTAAATGAGACACGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGGAAGTGCCACAAATGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp AGGGTGCCTCCAGGTAGCAAAGGCCCAATGGCTTTCTCCTCCGCCTaGGTGTTTGCGTGCCATTTTTGTATTCCAACACAGGCCTGTCTA +
Preference number: 1 (lower is better)
Translates to: RVPPGSKGPMAFSSA*VFACHFCIPTQACL
Trigger: TAGACAGGCCTGTGTTGGAATACAAAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGCCATTGGGCCTTTGCTACCTGGAGGCACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp CTTGTGTGCATTTGTGGCACTTCCTCTGTGGCCCAAGTGCCAGGATaGGCTGCATCCGTGTCTCATTTAGGAGACATGCACGATGGGTCT +
Preference number: 1 (lower is better)
Translates to: LVCICGTSSVAQVPG*AASVSHLGDMHDGS
Trigger: AGACCCATCGTGCATGTCTCCTAAATGAGACACGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGGAAGTGCCACAAATGCACACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp TATTCCAGCAGAATGAACACTCTATGGAGGCCCATTCCTAAAGGGTaGCTCCAGGTAGCAAAGGCCCAATGGCTTTCTCCTCCGCCTGAG +
Preference number: 1 (lower is better)
Translates to: YSSRMNTLWRPIPKG*LQVAKAQWLSPPPE
Trigger: CTCAGGCGGAGGAGAAAGCCATTGGGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGGCCTCCATAGAGTGTTCATTCTGCTGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp TGGAGGCCCATTCCTAAAGGGTGCCTCCAGGTAGCAAAGGCCCAATaGCTTTCTCCTCCGCCTGAGTGTTTGCGTGCCATTTTTGTATTC +
Preference number: 1 (lower is better)
Translates to: WRPIPKGCLQVAKAQ*LSPPPECLRAIFVF
Trigger: GAATACAAAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGCCATTGGGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGGCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp CCTGTCCCCGATTCCTCACTATTTTCCTCCTTCTGGCTGCTCTGCTaGTCTGGACACTCAAAGTGGACACAGTGGAACACCTCATTTGCT +
Preference number: 1 (lower is better)
Translates to: PVPDSSLFSSFWLLC*SGHSKWTQWNTSFA
Trigger: AGCAAATGAGGTGTTCCACTGTGTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAAATAGTGAGGAATCGGGGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR GCA 90 bp TCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTaGCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGT +
Preference number: 1 (lower is better)
Translates to: SHTWTQGFRTHGLYI*PLRLLCKMRKKPHR
Trigger: ACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp CCCCGATTCCTCACTATTTTCCTCCTTCTGGCTGCTCTGCTGCTCTaGACACTCAAAGTGGACACAGTGGAACACCTCATTTGCTGTGTT +
Preference number: 1 (lower is better)
Translates to: PRFLTIFLLLAALLL*TLKVDTVEHLICCV
Trigger: AACACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAAATAGTGAGGAATCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR CCA 90 bp CATTTAGTTGCCAGGGCAATGTATTCCAGCAGAATGAACACTCTATaGAGGCCCATTCCTAAAGGGTGCCTCCAGGTAGCAAAGGCCCAA +
Preference number: 1 (lower is better)
Translates to: HLVARAMYSSRMNTL*RPIPKGCLQVAKAQ
Trigger: TTGGGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGGCCTCCATAGAGTGTTCATTCTGCTGGAATACATTGCCCTGGCAACTAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp TTTGCTGTGTTGTGTGTCCCAACGATACGGATGAAGGAGGCAGGCTaGCTTTCAAAAGTTACTGACTGCCAGGACTTGCAGGAGACTTTA +
Preference number: 1 (lower is better)
Translates to: FAVLCVPTIRMKEAG*LSKVTDCQDLQETL
Trigger: TAAAGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGACACACAACACAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR TCA 90 bp GAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAATaGGGAAGAAGCCGCATCGTGCTCACAAATAATACACATTCCACA +
Preference number: 1 (lower is better)
Translates to: EHTVCTSARLGCSAK*GRSRIVLTNNTHST
Trigger: TGTGGAATGTGTATTATTTGTGAGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 90 bp ACGCCAGAACTCGGTATATGTTTATCTACATGGACTTCGGAACAGTaGATTAGCAGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCA +
Preference number: 1 (lower is better)
Translates to: TPELGICLSTWTSEQ*ISSGHSNYFLVSLP
Trigger: TGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCTGCTAATTCACTGTTCCGAAGTCCATGTAGATAAACATATACCGAGTTCTGGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCGTGCCATGCCGTCCTaGGGAGACTCCCAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRRAMPS*GDSQAD
Trigger: ATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCAAGGACTGCAGTGCTaGTCACGTGCCATGCCGTCC +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRQGLQC*SRAMPS
Trigger: GGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGAGTCCCCGGCAGGTTTaGCCACGCCAGAACTCGGTA +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSPRQV*PRQNSV
Trigger: TACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACT...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTTGAGTACTGTGGTGTaGGGGAAGCACGGAGTCCCA +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRLSTVV*GKHGVP
Trigger: TGGGACTCCGTGCTTCCCCCACACCACAGTACTCAA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCAGAGGCCGGAGCTCTaGGGACAGCGGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALQRPEL*GQRRGR
Trigger: CCTGCCCCTCCGCTGTCCCCAGAGCTCCGGCCTCTG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCCCGGGGCTGGGGGCTaGCAGAGTCAGCAACCATGC +
Preference number: 2 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALPGAGG*QSQQPC
Trigger: GCATGGTTGCTGACTCTGTCAGCCCCCAGCCCCGGG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCAGCTCTCTGGCTAATTaGCAACCCGGGGCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPSSLAN*QPGAGG
Trigger: GCCCCCAGCCCCGGGTTGCCAATTAGCCAGAGAGCT...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGGATCCATGTCAGGAATaGCAGGTGAGTAACTCAGCC +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRDPCQE*QVSNSA
Trigger: GGCTGAGTTACTCACCTGTCATTCCTGACATGGATC...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGGAACGTGTCCACCCTaGCCCGGTAGCCCTCTGATG +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPGTCPP*PGSPLM
Trigger: CATCAGAGGGCTACCGGGGCAGGGTGGACACGTTCC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGAGGAAGTGCTGTGTGTaGAGGAGCTCTCTGGCTAAT +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRRKCCV*RSSLAN
Trigger: ATTAGCCAGAGAGCTCCTGCACACACAGCACTTCCT...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGAGTCCCCGGCAGGTTTaGCCACGCCAGAACTCGGTA +
Preference number: 2 (lower is better)
Translates to: TPRLMLMATEAGALGTAESPRQV*PRQNSV
Trigger: TACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCTTGGCAACCCGGGGCTaGGGGCTGACAGAGTCAGCA +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPLATRG*GLTESA
Trigger: TGCTGACTCTGTCAGCCCCCAGCCCCGGGTTGCCAA...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCAGCTCTCTGGCTAATTaGCAACCCGGGGCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPSSLAN*QPGAGG
Trigger: GCCCCCAGCCCCGGGTTGCCAATTAGCCAGAGAGCT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGGAGGGACAGAGATCTaGAAGGGCATGCCCCGAAGG +
Preference number: 2 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPGGTEI*KGMPRR
Trigger: CCTTCGGGGCATGCCCTTCCAGATCTCTGTCCCTCC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGCCCAAGTGCCAGGATaGGCTGCATCCGTGTCTCAT +
Preference number: 2 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEAQVPG*AASVSH
Trigger: ATGAGACACGGATGCAGCTCATCCTGGCACTTGGGC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGCCCCGGTAGCCCTCTaGTGTCTGCCATCCTGTGTT +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPAPVAL*CLPSCV
Trigger: AACACAGGATGGCAGACATCAGAGGGCTACCGGGGC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAGCTGCTCACGTGCCATaGCGTCCTGGGGAGACTCCC +
Preference number: 2 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGAAHVP*RPGETP
Trigger: GGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGC...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGTTACTGAGGACCATTaGCCTCATGGGCCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPVTEDH*PHGPRP
Trigger: TGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAAC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGCTGCAGACCTGCCCTaGCCGGGCCGTGCCCGACCT +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEAADLP*PGRARP
Trigger: AGGTCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCCCAAGCTTAAAGGCTaGATCCATGTCAGGAATGAC +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRPKLKG*IHVRND
Trigger: GTCATTCCTGACATGGATCCAGCCTTTAAGCTTGGG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGCTCAGCCCTGCAGCTaGAGCTACCGGGGAGGATGG +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSAQPCS*SYRGGW
Trigger: CCATCCTCCCCGGTAGCTCCAGCTGCAGGGCTGAGC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTGTGCAGGAGCTCTCTaGCTAATTGGCAACCCGGGG +
Preference number: 2 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPCAGAL*LIGNPG
Trigger: CCCCGGGTTGCCAATTAGCCAGAGAGCTCCTGCACA...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCCTAGCTGGAAGGCCGTaGGGCTTGGGGCCAGCACTG +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSLAGRP*GLGPAL
Trigger: CAGTGCTGGCCCCAAGCCCCACGGCCTTCCAGCTAG...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTTTCTAGAGCGCAGCTaGTATGTCTTTGACACACCT +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRFLERS*YVFDTP
Trigger: AGGTGTGTCAAAGACATATCAGCTGCGCTCTAGAAA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTCCCGGGGCTGGGGGCTaGCAGAGTCAGCAACCATGC +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPPGAGG*QSQQPC
Trigger: GCATGGTTGCTGACTCTGTCAGCCCCCAGCCCCGGG...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCCTCTGTGGCCCAAGTaGCAGGATGAGCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALPLWPK*QDELHP
Trigger: CGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGGGCAGGCAATGTTGTaGGCAGTTACCCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALGQAML*AVTQGR
Trigger: CCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGCTGCTCACGTGCCATaGCGTCCTGGGGAGACTCCC +
Preference number: 2 (lower is better)
Translates to: VPALASEWPGRYTHLYRPAAHVP*RPGETP
Trigger: GGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTCCTTTGATCAGGGTTaGAGGTTGGCGCCGAAGACC +
Preference number: 2 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPSFDQG*RLAPKT
Trigger: GGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGA...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGCACAGGAGGGCTCTaGGTGCTCTGTGGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: VPALASEWPGRYTHLYRPSTGGL*VLCGQG
Trigger: CCCCTGCCCACAGAGCACGCAGAGCCCTCCTGTGCT...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACAGCACAGGAGGGCTCTaGGTGCTCTGTGGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHSTGGL*VLCGQG
Trigger: CCCCTGCCCACAGAGCACGCAGAGCCCTCCTGTGCT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCAGAGGCCGGAGCTCTaGGGACAGCGGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFQRPEL*GQRRGR
Trigger: CCTGCCCCTCCGCTGTCCCCAGAGCTCCGGCCTCTG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCCAGGTGTGTAGCTCCTaGCTGCAGGGCCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSQVCSS*LQGLLH
Trigger: GTGGAGGAGGCCCTGCAGCCAGGAGCTACACACCTG...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 90 bp CTGGGGAACTCCAGGCTGCCCGGGGACTTTCTGGTAGCCACTCACTaGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGGT +
Preference number: 2 (lower is better)
Translates to: LGNSRLPGDFLVATH*SLFPGDEVLALVCG
Trigger: ACCACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTACCAGAAAGTCCCCGGGCAGCCTGGAGTTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGGCAGAGATCAGAGCTaGGGGGATAGGAAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALGRDQS*GDRKQL
Trigger: GAGCTGCTTCCTATCCCCTCAGCTCTGATCTCTGCC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCAGCCTCCTCCCATTATaGAATGCCTGGCATCCCAGG +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPSLLPL*NAWHPR
Trigger: CCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCCTGGCAGCGCGGCTGTaGGGGAATGAGACTTTGCCA +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSLAARL*GNETLP
Trigger: TGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAG...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACCTGTTCCCTGGAGATaGGGTCCTTGCCCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSPVPWR*GPCPGV
Trigger: CACACCAGGGCAAGGACCTCATCTCCAGGGAACAGG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGAGGAGACCGTTTCCTaGCGTTGCCCGAGCCCACCA +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHEETVS*RCPSPP
Trigger: TGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAACCCAAGGACTGCAGTaGTGCTCACGTGCCATGCCG +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSTQGLQ*CSRAMP
Trigger: CGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGT...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAGCATCGCTGCAGACCTaGCCTGCCCGGGCCGTGCCC +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKASLQT*PARAVP
Trigger: GGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGC...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGCTTGTGTGCATTTGTaGCACTTCCTCTGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: TPRLMLMATEAGALGTAEACVHL*HFLCGP
Trigger: TGGGCCACAGAGGAAGTGCCACAAATGCACACAAGC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCCGTGCCATGCCGTCCTaGGGAGACTCCCAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: VPALASEWPGRYTHLYRPRAMPS*GDSQAD
Trigger: ATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACG...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAAGGTCGCTTTGGTCCTaGTGGCCCAGGGGAGAAGTG +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSRSLWS*WPRGEV
Trigger: CACTTCTCCCCTGGGCCACCAGGACCAAAGCGACCT...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCAGGTCGCTTTGGTCCTaGTGGCCCAGGGGAGAAGTG +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSRSLWS*WPRGEV
Trigger: CACTTCTCCCCTGGGCCACCAGGACCAAAGCGACCT...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGCCTCCACTCTCTGCTaGGCTGAGGGCTCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHASTLC*AEGSVV
Trigger: CACCACAGAGCCCTCAGCCCAGCAGAGAGTGGAGGC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 90 bp AAGGAAACTCCCACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTaGGCGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATG +
Preference number: 2 (lower is better)
Translates to: KETPTPSPSFDQGCR*APKTQGLQCCSRAM
Trigger: CATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGTGGGAGTTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 90 bp GGAGATGAGGTCCTTGCCCTGGTGTGTGGTGTGACACACCTTGACTaGGCCTCCAGGCCCAGCTGGACACACGAAAAGAGTTCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: GDEVLALVCGVTHLD*ASRPSWTHEKSSCP
Trigger: GGGGCAGGAACTCTTTTCGTGTGTCCAGCTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCACACACCAGGGCAAGGACCTCATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 90 bp CTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGTGTCCTTTCCATaGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: LCLGGGDHGALVSFP*VTEDHCPHGPRPQA
Trigger: TGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGGACACAAGGGCGCCATGGTCACCACCACCCAGGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGCCATTTTCTCCCCCTTaGGACCTGCCTGATTTGGAT +
Preference number: 2 (lower is better)
Translates to: TPRLMLMATEAGALGTAEPFSPP*DLPDLD
Trigger: ATCCAAATCAGGCAGGTCTCAAGGGGGAGAAAATGG...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGCTTTCTCCTCCGCCTaGGTGTTTGCGTGCCATTTT +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPAFSSA*VFACHF
Trigger: AAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGTGGACTTCGGAACAGTaGATTAGCAGCGGGCATAGT +
Preference number: 2 (lower is better)
Translates to: TPRLMLMATEAGALGTAEWTSEQ*ISSGHS
Trigger: ACTATGCCCGCTGCTAATTCACTGTTCCGAAGTCCA...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCTGGCAGCGCGGCTGTaGGGGAATGAGACTTTGCCA +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHLAARL*GNETLP
Trigger: TGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACTGGTGTGACACACCTTaGCTTGGCCTCCAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHWCDTP*LGLQAQ
Trigger: CTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCA...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTGAGGAGACCGTTTCCTaGCGTTGCCCGAGCCCACCA +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPEETVS*RCPSPP
Trigger: TGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTC...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCAGTGCCAGGATGAGCTaGATCCGTGTCTCATTTAGG +
Preference number: 2 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPSARMS*IRVSFR
Trigger: CCTAAATGAGACACGGATGCAGCTCATCCTGGCACT...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCCCTCTGTGGCCCAAGTaGCAGGATGAGCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: VPALASEWPGRYTHLYRPPLWPK*QDELHP
Trigger: CGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGG...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGCTGCTCACGTGCCATaGCGTCCTGGGGAGACTCCC +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEAAHVP*RPGETP
Trigger: GGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGAAGCAGCTCAGCCCTaGAGCTGGAGCTACCGGGGA +
Preference number: 2 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQEAAQP*SWSYRG
Trigger: TCCCCGGTAGCTCCAGCTGCAGGGCTGAGCTGCTTC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTTTGAGTACTGTGGTGTaGGGGAAGCACGGAGTCCCA +
Preference number: 2 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALLSTVV*GKHGVP
Trigger: TGGGACTCCGTGCTTCCCCCACACCACAGTACTCAA...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTCTGTGGGCAGGGGACTaGAGGGTTGCAGATGCAGGG +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCLWAGD*RVADAG
Trigger: CCCTGCATCTGCAACCCTCCAGTCCCCTGCCCACAG...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGTGTTTAGGTCGCTTTaGTCCTGGTGGCCCAGGGGA +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSVFRSL*SWWPRG
Trigger: TCCCCTGGGCCACCAGGACCAAAGCGACCTAAACAC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGGGCCGTGCCCGACCTaGGCATCGCTCGGAGGAGCT +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAGPCPT*ASLGGA
Trigger: AGCTCCTCCGAGCGATGCCCAGGTCGGGCACGGCCC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGCAGAAAATCCTAGCTaGAAGGCCGTGGGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSAENPS*KAVGLG
Trigger: CCCAAGCCCCACGGCCTTCCAGCTAGGATTTTCTGC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGCCACCATCGTCAAATaGGGTCCTTTTGATGAGGAT +
Preference number: 2 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEATIVK*GPFDED
Trigger: ATCCTCATCAAAAGGACCTCATTTGACGATGGTGGC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGCCCTCACCCTCCTTTaGTCAGGGTTGCAGGTTGGC +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCALTLL*SGLQVG
Trigger: GCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGCCTGGGAAAGGAGGTaGACCCGTGTCCTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHAWERR*TRVLLE
Trigger: CTCCAAAAGGACACGGGTTCACCTCCTTTCCCAGGC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACTCTTTCCTCCTCCCTaGTGGAAGCCAGAGACCTAC +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSLFPPP*WKPETY
Trigger: GTAGGTCTCTGGCTTCCATCAGGGAGGAGGAAAGAG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCGAGGAGACCGTTTCCTaGCGTTGCCCGAGCCCACCA +
Preference number: 2 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFEETVS*RCPSPP
Trigger: TGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTC...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCCTTCCTCCTGTTCCCTaGGCCTGGGCTAGATTAGAG +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSLPPVP*AWARLE
Trigger: CTCTAATCTAGCCCAGGCGCAGGGAACAGGAGGAAG...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGGGCAGGCAATGTTGTaGGCAGTTACCCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCGQAML*AVTQGR
Trigger: CCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGAAGCAGCTCAGCCCTaGAGCTGGAGCTACCGGGGA +
Preference number: 2 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCEAAQP*SWSYRG
Trigger: TCCCCGGTAGCTCCAGCTGCAGGGCTGAGCTGCTTC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCCTCCCATTATGAAATaGCTGGCATCCCAGGAGTGT +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPPPIMK*LASQEC
Trigger: ACACTCCTGGGATGCCAGGCATTTCATAATGGGAGG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACAGGTCAGCAGCATGCTaGTTCAGGCCAAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHRSAAC*FRPRAS
Trigger: AGAGGCCCTTGGCCTGAAGCAGCATGCTGCTGACCT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGCCGAGCTGCCAAGCTaGTATCTCGTTCCCGGAGCA +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCAELPS*YLVPGA
Trigger: TGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGTCCATGTTGGCTTGTTaGCCCTGGGGCTGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTSMLAC*PWGWPG
Trigger: CCCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGA...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCAGCACACACCCTACCTaGCCTACACTCTCAGTCCAC +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSSTHPT*PTLSVH
Trigger: GTGGACTGAGAGTGTAGGGCAGGTAGGGTGTGTGCT...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACAGGAGACATGCACGATaGGTCTCTGTCCCCGCAAGC +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHRRHAR*VSVPAS
Trigger: GCTTGCGGGGACAGAGACCCATCGTGCATGTCTCCT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAGCTTGTGTGCATTTGTaGCACTTCCTCTGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: QAAISFPEHRRALRALWAACVHL*HFLCGP
Trigger: TGGGCCACAGAGGAAGTGCCACAAATGCACACAAGC...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTAGTCCCCGGCAGGTTTaGCCACGCCAGAACTCGGTA +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPSPRQV*PRQNSV
Trigger: TACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACT...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACATCAGGGTTGCAGGTTaGCGCCGAAGACCCAAGGAC +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHIRVAG*RRRPKD
Trigger: GTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGAT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGCTCTGCGTGCTCTGTaGGCAGGGGACTGGAGGGTT +
Preference number: 2 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCALRAL*AGDWRV
Trigger: AACCCTCCAGTCCCCTGCCCACAGAGCACGCAGAGC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCTGGGTGCAGCAGACTaGCCTGGGAGATGCCAGGGT +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTLGAAD*PGRCQG
Trigger: ACCCTGGCATCTCCCAGGCCAGTCTGCTGCACCCAG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 90 bp GCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTaGTGTCCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGC +
Preference number: 2 (lower is better)
Translates to: ATSHFFAWVVVTMAP*CPFHWLLRTIALMG
Trigger: GCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGGACACAAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGCCCAAGTGCCAGGATaGGCTGCATCCGTGTCTCAT +
Preference number: 2 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNAQVPG*AASVSH
Trigger: ATGAGACACGGATGCAGCTCATCCTGGCACTTGGGC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGGCAGAGATCAGAGCTaGGGGGATAGGAAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCGRDQS*GDRKQL
Trigger: GAGCTGCTTCCTATCCCCTCAGCTCTGATCTCTGCC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTGGCAGAGATCAGAGCTaGGGGGATAGGAAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPGRDQS*GDRKQL
Trigger: GAGCTGCTTCCTATCCCCTCAGCTCTGATCTCTGCC...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGGGCCTCTGGGCAGGTaGTGCCCATGTTTAAAAAGA +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSGPLGR*CPCLKR
Trigger: TCTTTTTAAACATGGGCATCACCTGCCCAGAGGCCC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCCTGTTCCCTGGAGATaGGGTCCTTGCCCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTPVPWR*GPCPGV
Trigger: CACACCAGGGCAAGGACCTCATCTCCAGGGAACAGG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGTTCAGCCTGGCTTCTaGCTGGAAGCTCGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEVQPGF*LEARWV
Trigger: CACCCAGCGAGCTTCCAGTCAGAAGCCAGGCTGAAC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCCCATTCCTAAAGGGTaGCTCCAGGTAGCAAAGGCC +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHPIPKG*LQVAKA
Trigger: GGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGTCCACAGGTTGATTTaGTTGTGTGCATTTGTGGCA +
Preference number: 2 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEVHRLI*LCAFVA
Trigger: TGCCACAAATGCACACAAGCAAATCAACCTGTGGAC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATACGGAGTCCCAGTTCTaGGTTCCTGACGCTGATGGG +
Preference number: 2 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNTESQF*VPDADG
Trigger: CCCATCAGCGTCAGGAACGCAGAACTGGGACTCCGT...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGACCCAAGGACTGCAGTaGTGCTCACGTGCCATGCCG +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTTQGLQ*CSRAMP
Trigger: CGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGT...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGGGAGGATGGAGAGCTaGAGACCCTGGCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCGRMES*RPWLLL
Trigger: GAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCCAAGGTCAGCAGCATaGTGCTTCAGGCCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTPRSAA*CFRPRA
Trigger: GGCCCTTGGCCTGAAGCAGCATGCTGCTGACCTTGG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGACCCTCCCCAGAGCTaGCAGAAGGTGACTTTGAAG +
Preference number: 2 (lower is better)
Translates to: VPALASEWPGRYTHLYRPDPPQS*QKVTLK
Trigger: CTTCAAAGTCACCTTCTGGCAGCTCTGGGGAGGGTC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTCTGCATGGACACAGCTaGTGCCCAGCACACACCCTA +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPLHGHS*CPAHTL
Trigger: TAGGGTGTGTGCTGGGCAGCAGCTGTGTCCATGCAG...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTTGGGCGGCCGGGCTGTaGTCCCTGAGGACCTTACTG +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAWAAGL*SLRTLL
Trigger: CAGTAAGGTCCTCAGGGAGCACAGCCCGGCCGCCCA...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTAAGCGGCTGACCCGTTaGCTCTTTCTAGAGCGCAGC +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCKRLTR*LFLERS
Trigger: GCTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTAAGCGGCTGACCCGTTaGCTCTTTCTAGAGCGCAGC +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPKRLTR*LFLERS
Trigger: GCTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTT...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGAGAGCTGCAGACCCTaGCTTCTCCTCAGGAACGTG +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCESCRP*LLLRNV
Trigger: CACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTTCCTTTGTCCCCATCTaGGTAGAAAACACACTGGGG +
Preference number: 2 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALSFVPI*VENTLG
Trigger: CCCCAGTGTGTTTTCTACCCAGATGGGGACAAAGGA...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGGGAGGGACAGAGATCTaGAAGGGCATGCCCCGAAGG +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTGGTEI*KGMPRR
Trigger: CCTTCGGGGCATGCCCTTCCAGATCTCTGTCCCTCC...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGAGGGGGAGGCGAGCTaGCAGCGCGGCTGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPEGEAS*QRGCEG
Trigger: TCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTC...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGGGCTGGCCTGGGCATaGGGGAGCTTATCTCCCCGA +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQGLAWA*GSLSPR
Trigger: TCGGGGAGATAAGCTCCCCCATGCCCAGGCCAGCCC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGTGATTTTCAAACAATaGTGTGTCGGGTGGGGCGGC +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSVIFKQ*CVGWGG
Trigger: GCCGCCCCACCCGACACACCATTGTTTGAAAATCAC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAACAGGCCCCACAGACCTaGAAGCTCTGCCCCAGTATC +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEQAPQT*KLCPSI
Trigger: GATACTGGGGCAGAGCTTCCAGGTCTGTGGGGCCTG...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 90 bp GTCTTTGACACACCTGAAAGGAAACTCCCACGCCCTCACCCTCCTTaGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTGCAGT +
Preference number: 2 (lower is better)
Translates to: VFDTPERKLPRPHPP*IRVAGWRRRPKDCS
Trigger: ACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGTGGGAGTTTCCTTTCAGGTGTGTCAAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGATCCATGTCAGGAATaGCAGGTGAGTAACTCAGCC +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSDPCQE*QVSNSA
Trigger: GGCTGAGTTACTCACCTGTCATTCCTGACATGGATC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAGATCCATGTCAGGAATaGCAGGTGAGTAACTCAGCC +
Preference number: 2 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGDPCQE*QVSNSA
Trigger: GGCTGAGTTACTCACCTGTCATTCCTGACATGGATC...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATTTGAACTCTGCCCTTaGTATGACTGTCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: QAAISFPEHRRALRALWAFELCP*YDCLAP
Trigger: AGGAGCCAGACAGTCATATCAAGGGCAGAGTTCAAA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGGGCCTCTGGGCAGGTaGTGCCCATGTTTAAAAAGA +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHGPLGR*CPCLKR
Trigger: TCTTTTTAAACATGGGCATCACCTGCCCAGAGGCCC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCATCAGTCCTCACCAATaGCATCTACTGTTAGTGCCA +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPISPHQ*HLLLVP
Trigger: TGGCACTAACAGTAGATGTCATTGGTGAGGACTGAT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAACCCTGGTGTGTGGTGTaGCACACCTTGACTTGGCCT +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEPWCVV*HTLTWP
Trigger: AGGCCAAGTCAAGGTGTGTCACACCACACACCAGGG...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCCCTGGTGTGTGGTGTaGCACACCTTGACTTGGCCT +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTPWCVV*HTLTWP
Trigger: AGGCCAAGTCAAGGTGTGTCACACCACACACCAGGG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCCCATTCCTAAAGGGTaGCTCCAGGTAGCAAAGGCC +
Preference number: 2 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNPIPKG*LQVAKA
Trigger: GGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGG...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAACGGAGTCCCAGTTCTaGGTTCCTGACGCTGATGGG +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPETESQF*VPDADG
Trigger: CCCATCAGCGTCAGGAACGCAGAACTGGGACTCCGT...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGATGCGAGGCCGAGCTaGCAAGCTGCTATCTCGTTC +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEDARPS*QAAISF
Trigger: GAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTAGATCTGGAAGGGCATaGCCCGAAGGAAAGAACCGC +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCRSGRA*PEGKNR
Trigger: GCGGTTCTTTCCTTCGGGGCATGCCCTTCCAGATCT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGGGGTGGTTCATAGCTaGTTCAAGTCCAAAGTGCTC +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSGVVHS*FKSKVL
Trigger: GAGCACTTTGGACTTGAAGCAGCTATGAACCACCCC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCAGGCAGCACTGGAATaGAAATCACTAAGTAGGAGA +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPQAALE*KSLSRR
Trigger: TCTCCTACTTAGTGATTTCCATTCCAGTGCTGCCTG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGTTGGCAACCCGGGGCTaGGGGCTGACAGAGTCAGCA +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQLATRG*GLTESA
Trigger: TGCTGACTCTGTCAGCCCCCAGCCCCGGGTTGCCAA...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAACTGTGGGCAGGGGACTaGAGGGTTGCAGATGCAGGG +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKLWAGD*RVADAG
Trigger: CCCTGCATCTGCAACCCTCCAGTCCCCTGCCCACAG...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGGGCTGAGGGCTCTGTaGTGCCCAGGAGCCCTCCCA +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPGLRAL*CPGALP
Trigger: TGGGAGGGCTCCTGGGCACCACAGAGCCCTCAGCCC...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTTCCCATTTCTTTGCCTaGGTGGTGGTGACCATGGCG +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPSHFFA*VVVTMA
Trigger: CGCCATGGTCACCACCACCCAGGCAAAGAAATGGGA...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAACTGGGGCTCATGTGGTaGGGAGCAATTTGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPELGLMW*GAIWQQ
Trigger: CTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAG...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGGGCGCACCAAGGCCTaGAGAGCCTTGGGGAGAGAT +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQGRTKA*RALGRD
Trigger: ATCTCTCCCCAAGGCTCTCCAGGCCTTGGTGCGCCC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GCCTCCTTTATTGGTGCTGCCGGTTGGGGGAGCGTGAGTTGGAGCCTGGGCTGGTCAAAGTGGACACAGTaGAACACCTCATTTGCTGTG +
Preference number: 2 (lower is better)
Translates to: ASFIGAAGWGSVSWSLGWSKWTQ*NTSFAV
Trigger: CACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGA...CCAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR CAA 90 bp AACACAACTGGAGGGGCAGCTAAGCCACGGCAGTCCCCGGCAGGTTaGGCCACGCCAGAACTCGGTATATGTTTATCTACATGGACTTCG +
Preference number: 2 (lower is better)
Translates to: NTTGGAAKPRQSPAG*ATPELGICLSTWTS
Trigger: CGAAGTCCATGTAGATAAACATATACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTGCCGTGGCTTAGCTGCCCCTCCAGTTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTGCTTTCTCCTCCGCCTaGGTGTTTGCGTGCCATTTT +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPAFSSA*VFACHF
Trigger: AAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGC...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGCCCTCACCCTCCTTTaGTCAGGGTTGCAGGTTGGC +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQALTLL*SGLQVG
Trigger: GCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCATTTGAACTCTGCCCTTaGTATGACTGTCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSFELCP*YDCLAP
Trigger: AGGAGCCAGACAGTCATATCAAGGGCAGAGTTCAAA...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGCGGCTGTGAGGGAATaGGACTTTGCCATCAGTCCT +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEAAVRE*DFAISP
Trigger: AGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAACCGTTTCCTGCCGTTaGCCGAGCCCACCAAGTCAC +
Preference number: 2 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPTVSCR*PSPPSH
Trigger: GTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGT...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTCCGCCTGAGTGTTTaGGTGCCATTTTTGTATTCC +
Preference number: 2 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGLRLSV*VPFLYS
Trigger: GGAATACAAAAATGGCACGCAAACACTCAGGCGGAG...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCCCATTCCTAAAGGGTaGCTCCAGGTAGCAAAGGCC +
Preference number: 2 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFPIPKG*LQVAKA
Trigger: GGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAACCTCTGTGGCCCAAGTaGCAGGATGAGCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKPLWPK*QDELHP
Trigger: CGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGG...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGAAAGCTTCTTGGAACTaGTATTTTTCAGTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: TPRLMLMATEAGALGTAEKASWN*YFSVPS
Trigger: ACTGGGGACTGAAAAATAGCAGTTCCAAGAAGCTTT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGTATTCCTTTTCAGATaGGAGGCCGAGCTGCCAAGC +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCVFLFR*EAELPS
Trigger: GCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATAC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAAGATCTGGAAGGGCATaGCCCGAAGGAAAGAACCGC +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPERSGRA*PEGKNR
Trigger: GCGGTTCTTTCCTTCGGGGCATGCCCTTCCAGATCT...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAACACGAAAAGAGTTCCTaGCCCAGTCAGAAGGCCCCT +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEHEKSS*PSQKAP
Trigger: AGGGGCCTTCTGACTGGGGCAGGAACTCTTTTCGTG...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCCATCAGGGGCTGTGGTaGAGGAGCAGCCACCAGGGC +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPHQGLW*RSSHQG
Trigger: GCCCTGGTGGCTGCTCCTGCACCACAGCCCCTGATG...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACAGGCAGCACTGGAATaGAAATCACTAAGTAGGAGA +
Preference number: 2 (lower is better)
Translates to: QAAISFPEHRRALRALWAQAALE*KSLSRR
Trigger: TCTCCTACTTAGTGATTTCCATTCCAGTGCTGCCTG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACTTGATATGACTGTCTaGCTCCTTTGTCCCCATCTG +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSLDMTV*LLCPHL
Trigger: CAGATGGGGACAAAGGAGCCAGACAGTCATATCAAG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAGGAGGGACAGAGATCTaGAAGGGCATGCCCCGAAGG +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKGGTEI*KGMPRR
Trigger: CCTTCGGGGCATGCCCTTCCAGATCTCTGTCCCTCC...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGTCGCTTTGGTCCTGGTaGCCCAGGGGAGAAGTGCTC +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQSLWSW*PRGEVL
Trigger: GAGCACTTCTCCCCTGGGCCACCAGGACCAAAGCGA...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACAGCAGTTTGACAACTaGGGCGACAGCATAATACTG +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSQQFDN*GDSIIL
Trigger: CAGTATTATGCTGTCGCCCCAGTTGTCAAACTGCTG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGTCGGAGCGTCCTCAGTaGTGCAGCCAAGAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQSERPQ*CSQEPG
Trigger: TCCTGGCTCTTGGCTGCACCACTGAGGACGCTCCGA...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTCAATGGTGTGTCGGGTaGGGCGGCTCTTCCATGCAC +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAQWCVG*GGSSMH
Trigger: GTGCATGGAAGAGCCGCCCCACCCGACACACCATTG...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTAGCCTGGCTTCTGACTaGAAGCTCGCTGGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRASLASD*KLAGCS
Trigger: GCTGCACCCAGCGAGCTTCCAGTCAGAAGCCAGGCT...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAGAGGGCCGTTCAGCCTaGCTTCTGACTGGAAGCTCG +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKEGRSA*LLTGSS
Trigger: CGAGCTTCCAGTCAGAAGCCAGGCTGAACGGCCCTC...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAACAGGCCCCACAGACCTaGAAGCTCTGCCCCAGTATC +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKQAPQT*KLCPSI
Trigger: GATACTGGGGCAGAGCTTCCAGGTCTGTGGGGCCTG...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCTCTGTCCCCGCAAGCTaGACCGTTCAAAACCAAGGA +
Preference number: 2 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFSVPAS*TVQNQG
Trigger: TCCTTGGTTTTGAACGGTTCAGCTTGCGGGGACAGA...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCTCTGTCCCCGCAAGCTaGACCGTTCAAAACCAAGGA +
Preference number: 2 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCSVPAS*TVQNQG
Trigger: TCCTTGGTTTTGAACGGTTCAGCTTGCGGGGACAGA...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGACTCAGCCACACGAGTaGCTATTAACTCCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQTQPHE*LLTPVS
Trigger: GGACACTGGAGTTAATAGTCACTCGTGTGGCTGAGT...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTTGGACTTCGGAACAGTaGATTAGCAGCGGGCATAGT +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCWTSEQ*ISSGHS
Trigger: ACTATGCCCGCTGCTAATTCACTGTTCCGAAGTCCA...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTACCGTTTCCTGCCGTTaGCCGAGCCCACCAAGTCAC +
Preference number: 2 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFTVSCR*PSPPSH
Trigger: GTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGT...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTAGTGCCAGGATGAGCTaGATCCGTGTCTCATTTAGG +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPSARMS*IRVSFR
Trigger: CCTAAATGAGACACGGATGCAGCTCATCCTGGCACT...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTAGTGCCAGGATGAGCTaGATCCGTGTCTCATTTAGG +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCSARMS*IRVSFR
Trigger: CCTAAATGAGACACGGATGCAGCTCATCCTGGCACT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGTCCACAGGTTGATTTaGTTGTGTGCATTTGTGGCA +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSVHRLI*LCAFVA
Trigger: TGCCACAAATGCACACAAGCAAATCAACCTGTGGAC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGAAAGCTTCTTGGAACTaGTATTTTTCAGTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: DGELQTLASPQERVHPAPKASWN*YFSVPS
Trigger: ACTGGGGACTGAAAAATAGCAGTTCCAAGAAGCTTT...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGAGGTCAGCAGCATGCTaGTTCAGGCCAAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQRSAAC*FRPRAS
Trigger: AGAGGCCCTTGGCCTGAAGCAGCATGCTGCTGACCT...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAACGCTGATGGGCAGGTaGCTGCCTCTCCAATGCTTC +
Preference number: 2 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPTLMGR*LPLQCF
Trigger: GAAGCATTGGAGAGGCAGCCACCTGCCCATCAGCGT...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGAGGAGAAAAGCTTCTTaGAACTGCTATTTTTCAGTC +
Preference number: 2 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGERRKAS*NCYFSV
Trigger: GACTGAAAAATAGCAGTTCCAAGAAGCTTTTCTCCT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCAGCTACCGGGGAGGATaGAGAGCTGCAGACCCTGGC +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPSYRGG*RAADPG
Trigger: GCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCT...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAGCACTGTGCAAAGGATaGGTGAGCACGCTGTCCCTC +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKALCKG*VSTLSL
Trigger: GAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGC...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGGCCATGAGGCCTCTTaGGGACTATTTCAGTTCTTT +
Preference number: 2 (lower is better)
Translates to: VPALASEWPGRYTHLYRPGHEAS*GLFQFF
Trigger: AAAGAACTGAAATAGTCCCCAAGAGGCCTCATGGCC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 90 bp GGTATGACTGGATCCGTGTCAGCGAGAGAGATGGGGGCATTCCAGTaGTCCTGCATGCCATTTAAACCTTGCCCTTCCCTCTCTTCTGGA +
Preference number: 2 (lower is better)
Translates to: GMTGSVSAREMGAFQ*SCMPFKPCPSLSSG
Trigger: TCCAGAAGAGAGGGAAGGGCAAGGTTTAAATGGCATGCAGGACAACTGGAATGCCCCCATCTCTCTCGCTGACACGGATCCAGTCATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGATCCGGAACACCTATaGTTCACTGAGTGGAGAATA +
Preference number: 2 (lower is better)
Translates to: VPALASEWPGRYTHLYRPDPEHL*FTEWRI
Trigger: TATTCTCCACTCAGTGAATCATAGGTGTTCCGGATC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCACTCTGCCCTTGATATaGCTGTCTGGCTCCTTTGTC +
Preference number: 2 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCTLPLI*LSGSFV
Trigger: GACAAAGGAGCCAGACAGTCATATCAAGGGCAGAGT...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTAATAATAATGAAAAGTaGAGGGTGGGGGTGCTGGCC +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPNNNEK*RVGVLA
Trigger: GGCCAGCACCCCCACCCTTCACTTTTCATTATTATT...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCAGAGGACGTGAACGATaGCGTGGGCCCAGGTCGGAA +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPRGRER*RGPRSE
Trigger: TTCCGACCTGGGCCCACGTCATCGTTCACGTCCTCT...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGCTTCCTCCTGTTCCCTaGGCCTGGGCTAGATTAGAG +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQLPPVP*AWARLE
Trigger: CTCTAATCTAGCCCAGGCGCAGGGAACAGGAGGAAG...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCACTTCCTCCTGTTCCCTaGGCCTGGGCTAGATTAGAG +
Preference number: 2 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPLPPVP*AWARLE
Trigger: CTCTAATCTAGCCCAGGCGCAGGGAACAGGAGGAAG...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCAGGAAGTGCTGTGTGTaGAGGAGCTCTCTGGCTAAT +
Preference number: 2 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCRKCCV*RSSLAN
Trigger: ATTAGCCAGAGAGCTCCTGCACACACAGCACTTCCT...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGACCCTCCCCAGAGCTaGCAGAAGGTGACTTTGAAG +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQDPPQS*QKVTLK
Trigger: CTTCAAAGTCACCTTCTGGCAGCTCTGGGGAGGGTC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGAGGAGAAAAGCTTCTTaGAACTGCTATTTTTCAGTC +
Preference number: 2 (lower is better)
Translates to: DGELQTLASPQERVHPAPRRKAS*NCYFSV
Trigger: GACTGAAAAATAGCAGTTCCAAGAAGCTTTTCTCCT...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGGGCTGAGGGCTCTGTaGTGCCCAGGAGCCCTCCCA +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFGLRAL*CPGALP
Trigger: TGGGAGGGCTCCTGGGCACCACAGAGCCCTCAGCCC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTTCCCATTTCTTTGCCTaGGTGGTGGTGACCATGGCG +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRASHFFA*VVVTMA
Trigger: CGCCATGGTCACCACCACCCAGGCAAAGAAATGGGA...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGATCCGGAACACCTATaGTTCACTGAGTGGAGAATA +
Preference number: 2 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIDPEHL*FTEWRI
Trigger: TATTCTCCACTCAGTGAATCATAGGTGTTCCGGATC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGGGCCTCTGGGCAGGTaGTGCCCATGTTTAAAAAGA +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQGPLGR*CPCLKR
Trigger: TCTTTTTAAACATGGGCATCACCTGCCCAGAGGCCC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCTCACTATTTTCCTCCTTCTGGCTGCTCTGCTGCTCTGGACACTCAAAGTGGACATTTCGGCTCCGACTaGCTCCTTCAATCACACTGG +
Preference number: 2 (lower is better)
Translates to: PHYFPPSGCSAALDTQSGHFGSD*LLQSHW
Trigger: CCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAATG...TCCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAAATAGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCTCCGCCTGAGTGTTTaGGTGCCATTTTTGTATTCC +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTLRLSV*VPFLYS
Trigger: GGAATACAAAAATGGCACGCAAACACTCAGGCGGAG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGTTGATTTGCTTGTGTaGATTTGTGGCACTTCCTCT +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHVDLLV*ICGTSS
Trigger: AGAGGAAGTGCCACAAATGCACACAAGCAAATCAAC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCCGAAGACCCAAGGACTaGAGTGCTGCTCACGTGCCA +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPRRPKD*SAAHVP
Trigger: TGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCG...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATAGAATGAACACTCTATaGAGGCCCATTCCTAAAGGG +
Preference number: 2 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNRMNTL*RPIPKG
Trigger: CCCTTTAGGAATGGGCCTCCATAGAGTGTTCATTCT...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAAGGAGAAAAGCTTCTTaGAACTGCTATTTTTCAGTC +
Preference number: 2 (lower is better)
Translates to: QAAISFPEHRRALRALWARRKAS*NCYFSV
Trigger: GACTGAAAAATAGCAGTTCCAAGAAGCTTTTCTCCT...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGAAGGTGAAGTTGACTaGGCTGGAGCCATCTGCACA +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAEGEVD*AGAICT
Trigger: TGTGCAGATGGCTCCAGCCCAGTCAACTTCACCTTC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTAGAAACGCCAAAGGCTaGGAGGCTCTTGTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRARNAKG*EALVLW
Trigger: CCAGAGAACAAGAGCCTCCCAGCCTTTGGCGTTTCT...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 90 bp CTCCAGGTAGCAAAGGCCCAATGGCTTTCTCCTCCGCCTGAGTGTTaGCGTGCCATTTTTGTATTCCAACACAGGCCTGTCTATGACTTC +
Preference number: 2 (lower is better)
Translates to: LQVAKAQWLSPPPEC*RAIFVFQHRPVYDF
Trigger: GAAGTCATAGACAGGCCTGTGTTGGAATACAAAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGCCATTGGGCCTTTGCTACCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 90 bp ACACACATCTTTACAGGCCCAGAAACGCCAAAGGCTGGGAGGCTCTaGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCA +
Preference number: 2 (lower is better)
Translates to: THIFTGPETPKAGRL*FSGESGFKTGFAKA
Trigger: TGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCCCAGCCTTTGGCGTTTCTGGGCCTGTAAAGATGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGATCCGGAACACCTATaGTTCACTGAGTGGAGAATA +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEDPEHL*FTEWRI
Trigger: TATTCTCCACTCAGTGAATCATAGGTGTTCCGGATC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGACTCAGCCACACGAGTaGCTATTAACTCCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQTQPHE*LLTPVS
Trigger: GGACACTGGAGTTAATAGTCACTCGTGTGGCTGAGT...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCATGGACTTCGGAACAGTaGATTAGCAGCGGGCATAGT +
Preference number: 2 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPWTSEQ*ISSGHS
Trigger: ACTATGCCCGCTGCTAATTCACTGTTCCGAAGTCCA...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCAGCCTCCTCCCATTATaGAATGCCTGGCATCCCAGG +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPSLLPL*NAWHPR
Trigger: CCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCT...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GTGGAACACCTCATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAAGGAGGCTACGGTTGTGCCAACTaGACCACAATCGCACCACTT +
Preference number: 2 (lower is better)
Translates to: VEHLICCVVCPNDTDEGGYGCAN*TTIAPL
Trigger: AAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTA...GCCTCCTTCATCCGTATCGTTGGGACACACAACACAGCAAATGAGGTGTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGTTGATTTGCTTGTGTaGATTTGTGGCACTTCCTCT +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCVDLLV*ICGTSS
Trigger: AGAGGAAGTGCCACAAATGCACACAAGCAAATCAAC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGTTGATTTGCTTGTGTaGATTTGTGGCACTTCCTCT +
Preference number: 2 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIVDLLV*ICGTSS
Trigger: AGAGGAAGTGCCACAAATGCACACAAGCAAATCAAC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTAGGAAGTGCTGTGTGTaGAGGAGCTCTCTGGCTAAT +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRARKCCV*RSSLAN
Trigger: ATTAGCCAGAGAGCTCCTGCACACACAGCACTTCCT...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGGCCCAGGGGAGAAGTaGTCTGTAGGACCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFGPGEK*SVGPAR
Trigger: CCTGGCTGGTCCTACAGAGCACTTCTCCCCTGGGCC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTCAAACAAAGACCTGCTaGCTCCGCCCCTCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASQTKTC*LRPSSL
Trigger: GAGGGAGGAGGGGCGGAGGCAGCAGGTCTTTGTTTG...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTGAGCGTCCTCAGTGGTaGAGCCAAGAGCCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASERPQW*SQEPGR
Trigger: CCTTCCTGGCTCTTGGCTGCACCACTGAGGACGCTC...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGAGGTTGGAGCATTATaGCAGGAACAGGTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQEVGAL*QEQVFP
Trigger: AGGGAACACCTGTTCCTGGCATAATGCTCCAACCTC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTTTACTGGCAGCACCCTaGCCTGCTGACCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASLLAAP*PADPGS
Trigger: GCTTCCAGGGTCAGCAGGGCAGGGTGCTGCCAGTAA...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCAGAATGAACACTCTATaGAGGCCCATTCCTAAAGGG +
Preference number: 2 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFRMNTL*RPIPKG
Trigger: CCCTTTAGGAATGGGCCTCCATAGAGTGTTCATTCT...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGCTCTGCGTGCTCTGTaGGCAGGGGACTGGAGGGTT +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFALRAL*AGDWRV
Trigger: AACCCTCCAGTCCCCTGCCCACAGAGCACGCAGAGC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCTGCCCTGCTGGGTGCTaGCTGCATGGACACAGCTGC +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFCPAGC*LHGHSC
Trigger: GCAGCTGTGTCCATGCAGCCAGCACCCAGCAGGGCA...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAAGGAGGCAGGCTGCCTTTCTTCTGTCAGCAACCATaGTCCACTGTTGCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: ICCVVCPNDTDEGGRLPFFCQQP*STVAGW
Trigger: CCAACCAGCAACAGTGGACCATGGTTGCTGACAGAA...GAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGACACACAACACAGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR TCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGTTTAATCACGCAGTTTaGTGCTACCCTACTATTTCC +
Preference number: 2 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQFNHAV*CYPTIS
Trigger: GGAAATAGTAGGGTAGCATCAAACTGCGTGATTAAA...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTAAAGCTTCTTGGAACTaGTATTTTTCAGTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCKASWN*YFSVPS
Trigger: ACTGGGGACTGAAAAATAGCAGTTCCAAGAAGCTTT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTCGAAGACCCAAGGACTaGAGTGCTGCTCACGTGCCA +
Preference number: 2 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASRRPKD*SAAHVP
Trigger: TGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCG...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGGGAGGATGGAGAGCTaGAGACCCTGGCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFGRMES*RPWLLL
Trigger: GAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTAAAACAAATGGAGTATaGCCACCTCTGCCACGGCAT +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAKTNGV*PPLPRH
Trigger: ATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTT...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp ATGAAGGAGGCAGGCTGCCTTTCAAAAGTTACTGACTGCCAGGACTTGCAGGAGACCATGGTCCACTGTTaGTGGTTGGTAGAAACCTCA +
Preference number: 2 (lower is better)
Translates to: MKEAGCLSKVTDCQDLQETMVHC*WLVETS
Trigger: TGAGGTTTCTACCAACCAGCAACAGTGGACCATGGT...CTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR CCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTGCAGAAAATCCTAGCTaGAAGGCCGTGGGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASAENPS*KAVGLG
Trigger: CCCAAGCCCCACGGCCTTCCAGCTAGGATTTTCTGC...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GTCCCAACGATACGGATGAAGGAGGCAGGCTGCCTTTCAAAAGTTACTGACTGCATGGTCCACTGTTGCTaGTTGGTAGAAACCTCAACG +
Preference number: 2 (lower is better)
Translates to: VPTIRMKEAGCLSKVTDCMVHCC*LVETST
Trigger: CGTTGAGGTTTCTACCAACCAGCAACAGTGGACCAT...GCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR TCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCCCAGTGTCCACAGGTTaGTTTGCTTGTGTGCATTTG +
Preference number: 2 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSPVSTG*FACVHL
Trigger: CAAATGCACACAAGCAAATCAACCTGTGGACACTGG...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGTTTCTAGAGCGCAGCTaGTATGTCTTTGACACACCT +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQFLERS*YVFDTP
Trigger: AGGTGTGTCAAAGACATATCAGCTGCGCTCTAGAAA...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGTTTAATCACGCAGTTTaGTGCTACCCTACTATTTCC +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTFNHAV*CYPTIS
Trigger: GGAAATAGTAGGGTAGCATCAAACTGCGTGATTAAA...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCCTAGGGCCGAGGCTTTaGAGCGTATTCCTTTTCAGA +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPLGPRL*SVFLFR
Trigger: TCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAG...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCACGCTGATGGGCAGGTaGCTGCCTCTCCAATGCTTC +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFTLMGR*LPLQCF
Trigger: GAAGCATTGGAGAGGCAGCCACCTGCCCATCAGCGT...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GTCCCAACGATACGGATGAAGGAGGCAGGCTGCCTTTCAAAAGTTACTGACTGCTTGCAACATTCTCCATaGGAACTATCAGCCCCTTCT +
Preference number: 2 (lower is better)
Translates to: VPTIRMKEAGCLSKVTDCLQHSP*ELSAPS
Trigger: AGAAGGGGCTGATAGTTCCCATGGAGAATGTTGCAA...GCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR CAA 90 bp GGACTTGCAGGAGACTTTAGTTCTGTCAGCAACCATGGTCCACTGTaGCTGGTTGGTAGAAACCTCAACGTAGTAGCTATAGCTTCGATC +
Preference number: 2 (lower is better)
Translates to: GLAGDFSSVSNHGPL*LVGRNLNVVAIASI
Trigger: GATCGAAGCTATAGCTACTACGTTGAGGTTTCTACCAACCAGCAACAGTGGACCATGGTTGCTGACAGAACTAAAGTCTCCTGCAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR TCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCCCAGTGTCCACAGGTTaGTTTGCTTGTGTGCATTTG +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPPVSTG*FACVHL
Trigger: CAAATGCACACAAGCAAATCAACCTGTGGACACTGG...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGACTCAGCCACACGAGTaGCTATTAACTCCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMTQPHE*LLTPVS
Trigger: GGACACTGGAGTTAATAGTCACTCGTGTGGCTGAGT...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCTCCTTTGATCAGGGTTaGAGGTTGGCGCCGAAGACC +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFSFDQG*RLAPKT
Trigger: GGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGA...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGACGCAAATGGTAAATaGTCCCAGACATTTATCATA +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEDANGK*SQTFII
Trigger: TATGATAAATGTCTGGGAGCATTTACCATTTGCGTC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCCCCAAGCTTAAAGGCTaGATCCATGTCAGGAATGAC +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPPKLKG*IHVRND
Trigger: GTCATTCCTGACATGGATCCAGCCTTTAAGCTTGGG...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCACCATTTTCTCCCCCTTaGGACCTGCCTGATTTGGAT +
Preference number: 2 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSPFSPP*DLPDLD
Trigger: ATCCAAATCAGGCAGGTCTCAAGGGGGAGAAAATGG...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CAGGAGACTTTAGTTCTGTCAGCAACCATGGTCCACTGTTGCTGGTTGGTAGAAAATCATGTACGGTTGTaGCAACTGAACCACAATCGC +
Preference number: 2 (lower is better)
Translates to: QETLVLSATMVHCCWLVENHVRL*QLNHNR
Trigger: GCGATTGTGGTTCAGTTGGCACAACCGTACATGATT...TTCTACCAACCAGCAACAGTGGACCATGGTTGCTGACAGAACTAAAGTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAAATATGCAGAATCAATaGCTGCAGCTGCCAAAACAA +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKNMQNQ*LQLPKQ
Trigger: TTGTTTTGGCAGCTGCAGCCATTGATTCTGCATATT...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTTGTATTCCAGCAGAATaGACACTCTATGGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASCIPAE*TLYGGP
Trigger: TGGGCCTCCATAGAGTGTTCATTCTGCTGGAATACA...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGGGGTGGTTCATAGCTaGTTCAAGTCCAAAGTGCTC +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFGVVHS*FKSKVL
Trigger: GAGCACTTTGGACTTGAAGCAGCTATGAACCACCCC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAGACGCAAATGGTAAATaGTCCCAGACATTTATCATA +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKDANGK*SQTFII
Trigger: TATGATAAATGTCTGGGAGCATTTACCATTTGCGTC...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 90 bp AGGAGACGGAGCCACATCAAGCCACCATCGTCAAATGAGGTCCTTTaGATGAGGATTAGGAGAAAAGCTTCTTGGAACTGCTATTTTTCA +
Preference number: 2 (lower is better)
Translates to: RRRSHIKPPSSNEVL*MRIRRKASWNCYFS
Trigger: TGAAAAATAGCAGTTCCAAGAAGCTTTTCTCCTAATCCTCATCAAAAGGACCTCATTTGACGATGGTGGCTTGATGTGGCTCCGTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCCCAGTGTCCACAGGTTaGTTTGCTTGTGTGCATTTG +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFPVSTG*FACVHL
Trigger: CAAATGCACACAAGCAAATCAACCTGTGGACACTGG...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCCCCCAAAAGCTCCAATaGAGTTGCCTTTCTACTCTC +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFPQKLQ*SCLSTL
Trigger: GAGAGTAGAAAGGCAACTTCATTGGAGCTTTTGGGG...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GACACAGTGGAACACCTCATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAATTGTTCACTGTGTTGTaGGTCCCAACAATTCGAATA +
Preference number: 2 (lower is better)
Translates to: DTVEHLICCVVCPNDTDELFTVL*VPTIRI
Trigger: TATTCGAATTGTTGGGACTCACAACACAGTGAACAA...TTCATCCGTATCGTTGGGACACACAACACAGCAAATGAGGTGTTCCACTGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR TCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCATCAGTCCTCACCAATaGCATCTACTGTTAGTGCCA +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFISPHQ*HLLLVP
Trigger: TGGCACTAACAGTAGATGTCATTGGTGAGGACTGAT...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCCAGGCAGCACTGGAATaGAAATCACTAAGTAGGAGA +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFQAALE*KSLSRR
Trigger: TCTCCTACTTAGTGATTTCCATTCCAGTGCTGCCTG...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp GCGTGCTCTGTGGGCAGGGGACTGGAGGGTTGCAGATaGAGGGCCGGGCAGCTCCTCCAGCACCCCCACCAG +
Preference number: 3 (lower is better)
Translates to: ACSVGRGLEGCR*RAGQLLQHPHQ
Trigger: CTGGTGGGGGTGCTGGAGGAGCTGCCCGGCCCTGCATCTGCAACCCTCCAGTCCCCTGCCCACAGAGCACGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp AGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTaGCCTGCCCGGGCCGTGCCCGACCTGGGCATCGCT +
Preference number: 3 (lower is better)
Translates to: SMPTSATASLQT*PARAVPDLGIA
Trigger: AGCGATGCCCAGGTCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp AGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTaGCCGAGCCCACCAAGTCACACCAGGCCCGCTGCC +
Preference number: 3 (lower is better)
Translates to: RPLLREETVSCR*PSPPSHTRPAA
Trigger: GGCAGCGGGCCTGGTGTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp ACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTaGAGACCTGCCCTGCCCGGGCCGTGCCCGACCTGG +
Preference number: 3 (lower is better)
Translates to: TNGVCPPLPRHR*RPALPGPCPTW
Trigger: CCAGGTCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 72 bp CGTGGGGCTTGGGGCCAGCACTGTGCAAAGGATGGGTaGGCACGCTGTCCCTCGGAGCGTCCTCAGTGGTGC +
Preference number: 3 (lower is better)
Translates to: RGAWGQHCAKDG*ARCPSERPQWC
Trigger: GCACCACTGAGGACGCTCCGAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGCTGGCCCCAAGCCCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp CTAGCTGGAAGGCCGTGGGGCTTGGGGCCAGCACTGTaGAAAGGATGGGTGAGCACGCTGTCCCTCGGAGCG +
Preference number: 3 (lower is better)
Translates to: LAGRPWGLGPAL*KGWVSTLSLGA
Trigger: CGCTCCGAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGCTGGCCCCAAGCCCCACGGCCTTCCAGCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp CTGGAGCTACCGGGGAGGATGGAGAGCTGCAGACCCTaGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGG +
Preference number: 3 (lower is better)
Translates to: LELPGRMESCRP*LLLRNVSTLPR
Trigger: CCGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp AGGCCGTGGGGCTTGGGGCCAGCACTGTGCAAAGGATaGGTGAGCACGCTGTCCCTCGGAGCGTCCTCAGTG +
Preference number: 3 (lower is better)
Translates to: RPWGLGPALCKG*VSTLSLGASSV
Trigger: CACTGAGGACGCTCCGAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGCTGGCCCCAAGCCCCACGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp GATGGGGCAGGAGGGCCGTTCAGCCTGGCTTCTGACTaGAAGCTCGCTGGGTGCAGCAGACTGGCCTGGGAG +
Preference number: 3 (lower is better)
Translates to: DGAGGPFSLASD*KLAGCSRLAWE
Trigger: CTCCCAGGCCAGTCTGCTGCACCCAGCGAGCTTCCAGTCAGAAGCCAGGCTGAACGGCCCTCCTGCCCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCCACCTCTCTCCATGTaGGCTTGTTGCCCCTGGGGC +
Preference number: 3 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPPPLSM*ACCPWG
Trigger: GCCCCAGGGGCAACAAGCCAACATGGAGAGAGGTGG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp CAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTaGCGTTGCCCGAGCCCACCAAGTCACACCAGGCCC +
Preference number: 3 (lower is better)
Translates to: QQRPLLREETVS*RCPSPPSHTRP
Trigger: GGGCCTGGTGTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp TGCAGGTTGGCGCCGAAGACCCAAGGACTGCAGTGCTaGTCACGTGCCATGCCGTCCTGGGGAGACTCCCAG +
Preference number: 3 (lower is better)
Translates to: CRLAPKTQGLQC*SRAMPSWGDSQ
Trigger: CTGGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp GGTTGCAGGTTGGCGCCGAAGACCCAAGGACTGCAGTaGTGCTCACGTGCCATGCCGTCCTGGGGAGACTCC +
Preference number: 3 (lower is better)
Translates to: GCRLAPKTQGLQ*CSRAMPSWGDS
Trigger: GGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp GCCCTGCAGCTGGAGCTACCGGGGAGGATGGAGAGCTaGAGACCCTGGCTTCTCCTCAGGAACGTGTCCACC +
Preference number: 3 (lower is better)
Translates to: ALQLELPGRMES*RPWLLLRNVST
Trigger: GGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCTCCAGCTGCAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp CCAGCCCACCCTCTCTTCCCAAGGTCAGCAGCATGCTaGTTCAGGCCAAGGGCCTCTGGGCAGGTGATGCCC +
Preference number: 3 (lower is better)
Translates to: PAHPLFPRSAAC*FRPRASGQVMP
Trigger: GGGCATCACCTGCCCAGAGGCCCTTGGCCTGAAGCAGCATGCTGCTGACCTTGGGAAGAGAGGGTGGGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp GCAGCTCAGCCCTGCAGCTGGAGCTACCGGGGAGGATaGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACG +
Preference number: 3 (lower is better)
Translates to: AAQPCSWSYRGG*RAADPGFSSGT
Trigger: CGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCTCCAGCTGCAGGGCTGAGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp AGGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTaGCAGCGCGGCTGTGAGGGAATGAGACTTTGCCAT +
Preference number: 3 (lower is better)
Translates to: RAGSQQSEGEAS*QRGCEGMRLCH
Trigger: ATGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp CACCTGCCACCTCTCTCCATGTTGGCTTGTTGCCCCTaGGGCTGGCCTGGGCATGGGGGAGCTTATCTCCCC +
Preference number: 3 (lower is better)
Translates to: HLPPLSMLACCP*GWPGHGGAYLP
Trigger: GGGGAGATAAGCTCCCCCATGCCCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGAGAGAGGTGGCAGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp GGCACTGGCCGCACCCTCAGGCCCAGGTGGGAAGTGTaGGCTGGGGGTAAACCCAGCAACTCAGGACTAGCA +
Preference number: 3 (lower is better)
Translates to: GTGRTLRPRWEV*AGGKPSNSGLA
Trigger: TGCTAGTCCTGAGTTGCTGGGTTTACCCCCAGCCCACACTTCCCACCTGGGCCTGAGGGTGCGGCCAGTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGACCGTTTCCTGCCGTaGCCCGAGCCCACCAAGTCA +
Preference number: 3 (lower is better)
Translates to: DGELQTLASPQERVHPAPDRFLP*PEPTKS
Trigger: TGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp GGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTaGACCCGTGTCCTTTTGGAGTCCAGGGCAGGCTCC +
Preference number: 3 (lower is better)
Translates to: GKGSTPPAWERR*TRVLLESRAGS
Trigger: GGAGCCTGCCCTGGACTCCAAAAGGACACGGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp AGGGAGCACCGTGACCAGTGGTGGTCACAGAGGACGTaGACGATGACGTGGGCCCAGGTCGGAAGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: REHRDQWWSQRT*TMTWAQVGSSQ
Trigger: CTGGCTGCTTCCGACCTGGGCCCACGTCATCGTTCACGTCCTCTGTGACCACCACTGGTCACGGTGCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp ATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTaGAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: IRVAGWRRRPKD*SAAHVPCRPGE
Trigger: CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp GTGAAGGGTGGGGGTGCTGGCCACCTCCCATTTCTTTaGCTGGGTGGTGGTGACCATGGCGCCCTTGTGTCC +
Preference number: 3 (lower is better)
Translates to: VKGGGAGHLPFL*LGGGDHGALVS
Trigger: GGACACAAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCCCACCCTTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp CTGCAGCTGCCAAAACAAATGGAGTATGCCCACCTCTaGCACGGCATCGCTGCAGACCTGCCCTGCCCGGGC +
Preference number: 3 (lower is better)
Translates to: LQLPKQMEYAHL*HGIAADLPCPG
Trigger: GCCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp AAGTCACACCAGGCCCGCTGCCTCCTTTATTGGTGCTaGCGGTTGGGGGAGCGTGAGTTGGAGCCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: KSHQARCLLYWC*RLGERELEPGL
Trigger: CAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCGGGCCTGGTGTGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR CCA 72 bp CTCCAGCCTGGGAAAGGAGGTGAACCCGTGTCCTTTTaGAGTCCAGGGCAGGCTCCCAGCAAAGCGAGGGGG +
Preference number: 3 (lower is better)
Translates to: LQPGKGGEPVSF*SPGQAPSKARG
Trigger: CCCCCTCGCTTTGCTGGGAGCCTGCCCTGGACTCCAAAAGGACACGGGTTCACCTCCTTTCCCAGGCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp GCCAGGGCCTCTCCCCCTAGTGGAGCGACTGTCCACTaGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGC +
Preference number: 3 (lower is better)
Translates to: ARASPPSGATVH*LSKAALLSCHS
Trigger: GCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGGCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGAGGGGCAGGCAATGTaGTGCGCAGTTACCCAGGGC +
Preference number: 3 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSEGQAM*CAVTQG
Trigger: GCCCTGGGTAACTGCGCACAACATTGCCTGCCCCTC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCATCTCTCCATGTTGGCTaGTTGCCCCTGGGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSSLHVG*LPLGLA
Trigger: GGCCAGCCCCAGGGGCAACAAGCCAACATGGAGAGA...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 72 bp ACCGTGACCAGTGGTGGTCACAGAGGACGTGAACGATaGCGTGGGCCCAGGTCGGAAGCAGCCAGAGCCAGA +
Preference number: 3 (lower is better)
Translates to: TVTSGGHRGRER*RGPRSEAARAR
Trigger: TCTGGCTCTGGCTGCTTCCGACCTGGGCCCACGTCATCGTTCACGTCCTCTGTGACCACCACTGGTCACGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp GTACTGTGGTGTGGGGGAAGCACGGAGTCCCAGTTCTaGGTTCCTGACGCTGATGGGCAGGTGGCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: VLWCGGSTESQF*VPDADGQVAAS
Trigger: AGAGGCAGCCACCTGCCCATCAGCGTCAGGAACGCAGAACTGGGACTCCGTGCTTCCCCCACACCACAGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp TCCAAAGTGCTCACAACGGCTCCTGTGAGACTGCCCTaGTGGGTGCTGGCTGCATGGACACAGCTGCTGCCC +
Preference number: 3 (lower is better)
Translates to: SKVLTTAPVRLP*WVLAAWTQLLP
Trigger: GGGCAGCAGCTGTGTCCATGCAGCCAGCACCCAGCAGGGCAGTCTCACAGGAGCCGTTGTGAGCACTTTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp ATGGAAGCCAGAGACCTACCACAAACAAAGACCTGCTaGCTCCGCCCCTCCTCCCTCCGCCTCGCCTCTGCA +
Preference number: 3 (lower is better)
Translates to: MEARDLPQTKTC*LRPSSLRLASA
Trigger: TGCAGAGGCGAGGCGGAGGGAGGAGGGGCGGAGGCAGCAGGTCTTTGTTTGTGGTAGGTCTCTGGCTTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp CAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTaGGGAGACTCCCAGGCTGATGCTGATGGCGACAGA +
Preference number: 3 (lower is better)
Translates to: QGLQCCSRAMPS*GDSQADADGDR
Trigger: TCTGTCGCCATCAGCATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp CCACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTaGCGCCGAAGACCCAAGGACTGCAGTGCTGCTCAC +
Preference number: 3 (lower is better)
Translates to: PRPHPPLIRVAG*RRRPKDCSAAH
Trigger: GTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp AGGGTGGGGGTGCTGGCCACCTCCCATTTCTTTGCCTaGGTGGTGGTGACCATGGCGCCCTTGTGTCCTTTC +
Preference number: 3 (lower is better)
Translates to: RVGVLATSHFFA*VVVTMAPLCPF
Trigger: GAAAGGACACAAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCCCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp GCTTCTGGAGTCACAGAGCCATTCCCAACCCAGGCCTaGCATGGTCCCTGCCCTTGCATCAGAGTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: ASGVTEPFPTQA*HGPCPCIRVAW
Trigger: CCAGGCCACTCTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTTGGGAATGGCTCTGTGACTCCAGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGACCGTTTCCTGCCGTaGCCCGAGCCCACCAAGTCA +
Preference number: 3 (lower is better)
Translates to: VPALASEWPGRYTHLYRPDRFLP*PEPTKS
Trigger: TGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGAAGCGGCTGACCCGTaGGCTCTTTCTAGAGCGCAG +
Preference number: 3 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSEAADP*ALSRAQ
Trigger: CTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTTC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 72 bp GCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTaGGGGAATGAGACTTTGCCATCAGTCCTCACCAAT +
Preference number: 3 (lower is better)
Translates to: AKRGGGELAARL*GNETLPSVLTN
Trigger: ATTGGTGAGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp TCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGGTGTaGCACACCTTGACTTGGCCTCCAGGCCCAGCTGGA +
Preference number: 3 (lower is better)
Translates to: SLEMRSLPWCVV*HTLTWPPGPAG
Trigger: TCCAGCTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCACACACCAGGGCAAGGACCTCATCTCCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp TCAAACAATGGTGTGTCGGGTGGGGCGGCTCTTCCATaGACCTGTCCCCTGCCTCTGCATGAGCCCAGCAGA +
Preference number: 3 (lower is better)
Translates to: SNNGVSGGAALP*TCPLPLHEPSR
Trigger: TCTGCTGGGCTCATGCAGAGGCAGGGGACAGGTGCATGGAAGAGCCGCCCCACCCGACACACCATTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTTTGCTTGTGTGCATTaGTGGCACTTCCTCTGTGGC +
Preference number: 3 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEFACVH*WHFLCG
Trigger: GCCACAGAGGAAGTGCCACAAATGCACACAAGCAAA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCAGTCCCCGGCAGGTTaGGCCACGCCAGAACTCGGT +
Preference number: 3 (lower is better)
Translates to: PGAHVVGSNLAADGLISTQSPAG*ATPELG
Trigger: ACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGAGGGGCAGGCAATGTaGTGCGCAGTTACCCAGGGC +
Preference number: 3 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQEGQAM*CAVTQG
Trigger: GCCCTGGGTAACTGCGCACAACATTGCCTGCCCCTC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp CCTCAGGAACGTGTCCACCCTGCCCCGGTAGCCCTCTaGTGTCTGCCATCCTGTGTTCACACGGAAAGACAG +
Preference number: 3 (lower is better)
Translates to: PQERVHPAPVAL*CLPSCVHTERQ
Trigger: CTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGGGCAGGGTGGACACGTTCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp GTATTCCTTTTCAGATGCGAGGCCGAGCTGCCAAGCTaGTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCG +
Preference number: 3 (lower is better)
Translates to: VFLFRCEAELPS*YLVPGAQEGSA
Trigger: CGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp CAGGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTaGAGCGTATTCCTTTTCAGATGCGAGGCCGAGCTG +
Preference number: 3 (lower is better)
Translates to: QGAADVGLGPRL*SVFLFRCEAEL
Trigger: CAGCTCGGCCTCGCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp GCCCTTGTGTCCTTTCCATTGGTTACTGAGGACCATTaGCCTCATGGGCCCAGGCCACAGGCACCCACCTGT +
Preference number: 3 (lower is better)
Translates to: ALVSFPLVTEDH*PHGPRPQAPTC
Trigger: ACAGGTGGGTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGGACACAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp GTGGTGGTGACCATGGCGCCCTTGTGTCCTTTCCATTaGTTACTGAGGACCATTGCCCTCATGGGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: VVVTMAPLCPFH*LLRTIALMGPG
Trigger: GCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGGACACAAGGGCGCCATGGTCACCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp GCCTGGCATGGTCCCTGCCCTTGCATCAGAGTGGCCTaGGAGGTACACACATCTTTACAGGCCCAGAAACGC +
Preference number: 3 (lower is better)
Translates to: AWHGPCPCIRVA*EVHTSLQAQKR
Trigger: GCGTTTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGACCATGCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGTTTGCGTGCCATTTTaGTATTCCAACACAGGCCTG +
Preference number: 3 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEVCVPF*YSNTGL
Trigger: CAGGCCTGTGTTGGAATACAAAAATGGCACGCAAAC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGATCAGGGTTGCAGGTaGGCGCCGAAGACCCAAGGA +
Preference number: 3 (lower is better)
Translates to: VATHLSLFPGDEVLALVCDQGCR*APKTQG
Trigger: TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCCATCTGCACAGCAGTTaGACAACTGGGGCGACAGCA +
Preference number: 3 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSHLHSS*TTGATA
Trigger: TGCTGTCGCCCCAGTTGTCAAACTGCTGTGCAGATG...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGTTCGGTGTCTGCTTTaGCAGCTAGGTCGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIVRCLL*QLGRLL
Trigger: GAGGAGCCGACCTAGCTGCAAAAGCAGACACCGAAC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGTTTGCGTGCCATTTTaGTATTCCAACACAGGCCTG +
Preference number: 3 (lower is better)
Translates to: DGELQTLASPQERVHPAPVCVPF*YSNTGL
Trigger: CAGGCCTGTGTTGGAATACAAAAATGGCACGCAAAC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCACAGGTTGATTTGCTaGTGTGCATTTGTGGCACTT +
Preference number: 3 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEHRLIC*CAFVAL
Trigger: AAGTGCCACAAATGCACACAAGCAAATCAACCTGTG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGCTCCATGTTGGCTTGTaGCCCCTGGGGCTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQLHVGL*PLGLAW
Trigger: CCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGAG...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 72 bp GCGCCCACCGTTCCTTACAGGAGCCTCCTCCCATTATaGAATGCCTGGCATCCCAGGAGTGTTCCACTCTCC +
Preference number: 3 (lower is better)
Translates to: APTVPYRSLLPL*NAWHPRSVPLS
Trigger: GGAGAGTGGAACACTCCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCTCCTGTAAGGAACGGTGGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp ATTTCTCACTGTTCTTCTGAGGGGGTGCAGCCTCTCTaGAGGTCACTGTGGAGGGCGCACCAAGGCCTGGAG +
Preference number: 3 (lower is better)
Translates to: ISHCSSEGVQPL*RSLWRAHQGLE
Trigger: CTCCAGGCCTTGGTGCGCCCTCCACAGTGACCTTCAGAGAGGCTGCACCCCCTCAGAAGAACAGTGAGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp CTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATaGGAGGCCGAGCTGCCAAGCTGCTATCTCGTTCCC +
Preference number: 3 (lower is better)
Translates to: LGPRLCSVFLFR*EAELPSCYLVP
Trigger: GGGAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp CCATTCCCAACCCAGGCCTGGCATGGTCCCTGCCCTTaGATCAGAGTGGCCTGGGAGGTACACACATCTTTA +
Preference number: 3 (lower is better)
Translates to: PFPTQAWHGPCP*IRVAWEVHTSL
Trigger: TAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTTGGGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp AGCCAGATGAAGGGCACCTGGCCCCTTCCGCGAGGTTaGAGCATTATGCCAGGAACAGGTGTTCCCTGTACA +
Preference number: 3 (lower is better)
Translates to: SQMKGTWPLPRG*SIMPGTGVPCT
Trigger: TGTACAGGGAACACCTGTTCCTGGCATAATGCTCCAACCTCGCGGAAGGGGCCAGGTGCCCTTCATCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAGACCGTTTCCTGCCGTaGCCCGAGCCCACCAAGTCA +
Preference number: 3 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPDRFLP*PEPTKS
Trigger: TGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTC...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGAGGGGCAGGCAATGTaGTGCGCAGTTACCCAGGGC +
Preference number: 3 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAEGQAM*CAVTQG
Trigger: GCCCTGGGTAACTGCGCACAACATTGCCTGCCCCTC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTAAGGCCTGGAGAGCCTaGGGGAGAGATCAGGCCCCA +
Preference number: 3 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAKAWRA*GRDQAP
Trigger: TGGGGCCTGATCTCTCCCCAAGGCTCTCCAGGCCTT...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 72 bp TCTGGTAGCCACTCACTTGTCCCTGTTCCCTGGAGATaGGGTCCTTGCCCTGGTGTGTGGTGTGACACACCT +
Preference number: 3 (lower is better)
Translates to: SGSHSLVPVPWR*GPCPGVWCDTP
Trigger: AGGTGTGTCACACCACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp AACCTTTTCCGCGCCCTTCACCATTCACTCTGCAAATaGCCAGGGCCTCCAAATCCCGTCCAGCCCCAGGTA +
Preference number: 3 (lower is better)
Translates to: NLFRALHHSLCK*PGPPNPVQPQV
Trigger: TACCTGGGGCTGGACGGGATTTGGAGGCCCTGGTCATTTGCAGAGTGAATGGTGAAGGGCGCGGAAAAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp TTTGCAGCGTATTCCTTTTCAGATGCGAGGCCGAGCTaGCAAGCTGCTATCTCGTTCCCGGAGCACAGGAGG +
Preference number: 3 (lower is better)
Translates to: FAAYSFSDARPS*QAAISFPEHRR
Trigger: CCTCCTGTGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATACGCTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp GAATCAATGGCTGCAGCTGCCAAAACAAATGGAGTATaGCCACCTCTGCCACGGCATCGCTGCAGACCTGCC +
Preference number: 3 (lower is better)
Translates to: ESMAAAAKTNGV*PPLPRHRCRPA
Trigger: GGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGCTGCAGCCATTGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp GAGGGGCAGCTAAGCCACGGCAGTCCCCGGCAGGTTTaGCCACGCCAGAACTCGGTATATGTTTATCTACAT +
Preference number: 3 (lower is better)
Translates to: EGQLSHGSPRQV*PRQNSVYVYLH
Trigger: ATGTAGATAAACATATACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTGCCGTGGCTTAGCTGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCCCTCCGCCTGAGTGTTaGCGTGCCATTTTTGTATTC +
Preference number: 3 (lower is better)
Translates to: VPALASEWPGRYTHLYRPPPPEC*RAIFVF
Trigger: GAATACAAAAATGGCACGCAAACACTCAGGCGGAGG...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCCTCCGCCTGAGTGTTaGCGTGCCATTTTTGTATTC +
Preference number: 3 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHPPPEC*RAIFVF
Trigger: GAATACAAAAATGGCACGCAAACACTCAGGCGGAGG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGCCCCTTCCGCGAGGTaGGAGCATTATGCCAGGAAC +
Preference number: 3 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAAPSAR*EHYARN
Trigger: GTTCCTGGCATAATGCTCCAACCTCGCGGAAGGGGC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp TGGCACTTCCTCTGTGGCCCAAGTGCCAGGATGAGCTaGATCCGTGTCTCATTTAGGAGACATGCACGATGG +
Preference number: 3 (lower is better)
Translates to: WHFLCGPSARMS*IRVSFRRHARW
Trigger: CCATCGTGCATGTCTCCTAAATGAGACACGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGGAAGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp CACCGTTCCTTACAGGAGCCTCCTCCCATTATGAAATaGCTGGCATCCCAGGAGTGTTCCACTCTCCCACAC +
Preference number: 3 (lower is better)
Translates to: HRSLQEPPPIMK*LASQECSTLPH
Trigger: GTGTGGGAGAGTGGAACACTCCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCTCCTGTAAGGAACGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp AGTCCCAGTTCTGCGTTCCTGACGCTGATGGGCAGGTaGCTGCCTCTCCAATGCTTCGATAAACACAACTGG +
Preference number: 3 (lower is better)
Translates to: SPSSAFLTLMGR*LPLQCFDKHNW
Trigger: CCAGTTGTGTTTATCGAAGCATTGGAGAGGCAGCCACCTGCCCATCAGCGTCAGGAACGCAGAACTGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCAGCTGATATGTCTTaGACACACCTGAAAGGAAAC +
Preference number: 3 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSAADMS*THLKGN
Trigger: GTTTCCTTTCAGGTGTGTCAAAGACATATCAGCTGC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp ATTCCTAAAGGGTGCCTCCAGGTAGCAAAGGCCCAATaGCTTTCTCCTCCGCCTGAGTGTTTGCGTGCCATT +
Preference number: 3 (lower is better)
Translates to: IPKGCLQVAKAQ*LSPPPECLRAI
Trigger: AATGGCACGCAAACACTCAGGCGGAGGAGAAAGCCATTGGGCCTTTGCTACCTGGAGGCACCCTTTAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp GTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATaGAAATCACTAAGTAGGAGACGGAGCCACATCAAG +
Preference number: 3 (lower is better)
Translates to: VVRSYPGQAALE*KSLSRRRSHIK
Trigger: CTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCACAGGTTGATTTGCTaGTGTGCATTTGTGGCACTT +
Preference number: 3 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHHRLIC*CAFVAL
Trigger: AAGTGCCACAAATGCACACAAGCAAATCAACCTGTG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGCAGCTGATATGTCTTaGACACACCTGAAAGGAAAC +
Preference number: 3 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHAADMS*THLKGN
Trigger: GTTTCCTTTCAGGTGTGTCAAAGACATATCAGCTGC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCTCATTTCAAAATGTTaGAACTCTGCCCTTGATATG +
Preference number: 3 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPLISKC*NSALDM
Trigger: CATATCAAGGGCAGAGTTCAAACATTTTGAAATGAG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp ATTTGTGGCACTTCCTCTGTGGCCCAAGTGCCAGGATaGGCTGCATCCGTGTCTCATTTAGGAGACATGCAC +
Preference number: 3 (lower is better)
Translates to: ICGTSSVAQVPG*AASVSHLGDMH
Trigger: GTGCATGTCTCCTAAATGAGACACGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGGAAGTGCCACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp AGAAACGCCAAAGGCTGGGAGGCTCTTGTTCTCTGGTaGATCCGGATTCAAGACAGGCTTCGCAAAAGCAGC +
Preference number: 3 (lower is better)
Translates to: RNAKGWEALVLW*IRIQDRLRKSS
Trigger: GCTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCCCAGCCTTTGGCGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp GCCAGGGCAATGTATTCCAGCAGAATGAACACTCTATaGAGGCCCATTCCTAAAGGGTGCCTCCAGGTAGCA +
Preference number: 3 (lower is better)
Translates to: ARAMYSSRMNTL*RPIPKGCLQVA
Trigger: TGCTACCTGGAGGCACCCTTTAGGAATGGGCCTCCATAGAGTGTTCATTCTGCTGGAATACATTGCCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCCCTGATTTGGATAAATaGAGAAGAACAAAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: VPALASEWPGRYTHLYRPPDLDK*RRTKQP
Trigger: GGGCTGCTTTGTTCTTCTCAATTTATCCAAATCAGG...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCCAGTCCCCGGCAGGTTaGGCCACGCCAGAACTCGGT +
Preference number: 3 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFQSPAG*ATPELG
Trigger: ACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTG...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCATTTTTCAGTCCCCAGTaGAGTACTGTGGTGTGGGGG +
Preference number: 3 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPFFSPQ*STVVWG
Trigger: CCCCCACACCACAGTACTCAACTGGGGACTGAAAAA...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACTCATTTCAAAATGTTaGAACTCTGCCCTTGATATG +
Preference number: 3 (lower is better)
Translates to: QAAISFPEHRRALRALWALISKC*NSALDM
Trigger: CATATCAAGGGCAGAGTTCAAACATTTTGAAATGAG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACTCCCATCATCAGCACTaGCTTTTAGCTTCAAGTGTT +
Preference number: 3 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHSHHQH*LLASSV
Trigger: AACACTTGAAGCTAAAAGCAAGTGCTGATGATGGGA...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGCCTGATTTGGATAAATaGAGAAGAACAAAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQPDLDK*RRTKQP
Trigger: GGGCTGCTTTGTTCTTCTCAATTTATCCAAATCAGG...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCACCTCCGCCTGAGTGTTaGCGTGCCATTTTTGTATTC +
Preference number: 3 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPPPPEC*RAIFVF
Trigger: GAATACAAAAATGGCACGCAAACACTCAGGCGGAGG...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCACAGGTTGATTTGCTaGTGTGCATTTGTGGCACTT +
Preference number: 3 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFHRLIC*CAFVAL
Trigger: AAGTGCCACAAATGCACACAAGCAAATCAACCTGTG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGCCTTCCTTTTCCCCCTaGGCTCTGGAAAGGATAAGT +
Preference number: 3 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQPSFSP*ALERIS
Trigger: ACTTATCCTTTCCAGAGCCAAGGGGGAAAAGGAAGG...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp ATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAAGGAGGCAGGCTGCCTTTCAACCATGGTCCACTGTaGCTGGTTGGTAGAAACCTC +
Preference number: 3 (lower is better)
Translates to: ICCVVCPNDTDEGGRLPFNHGPL*LVGRNL
Trigger: GAGGTTTCTACCAACCAGCAACAGTGGACCATGGTT...GAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGACACACAACACAGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR TCA 72 bp AAGCGGCTGACCCGTTGGCTCTTTCTAGAGCGCAGCTaGTATGTCTTTGACACACCTGAAAGGAAACTCCCA +
Preference number: 3 (lower is better)
Translates to: KRLTRWLFLERS*YVFDTPERKLP
Trigger: TGGGAGTTTCCTTTCAGGTGTGTCAAAGACATATCAGCTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp CAAAGGCCCAATGGCTTTCTCCTCCGCCTGAGTGTTTaGGTGCCATTTTTGTATTCCAACACAGGCCTGTCT +
Preference number: 3 (lower is better)
Translates to: QRPNGFLLRLSV*VPFLYSNTGLS
Trigger: AGACAGGCCTGTGTTGGAATACAAAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGCCATTGGGCCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp TTGTGTGTCCCAACGATACGGATGAAGGAGGCAGGCTaGCTTTCAAAAGTTACTGACTGCCAGGACTTGCAG +
Preference number: 3 (lower is better)
Translates to: LCVPTIRMKEAG*LSKVTDCQDLQ
Trigger: CTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGACACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR CAA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCCTGATTTGGATAAATaGAGAAGAACAAAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: PGAHVVGSNLAADGLISTPDLDK*RRTKQP
Trigger: GGGCTGCTTTGTTCTTCTCAATTTATCCAAATCAGG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACTCAAATGAGGTCCTTTaGATGAGGATTAGGAGAAAA +
Preference number: 3 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHSNEVL*MRIRRK
Trigger: TTTTCTCCTAATCCTCATCAAAAGGACCTCATTTGA...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCTCATTTCAAAATGTTaGAACTCTGCCCTTGATATG +
Preference number: 3 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHLISKC*NSALDM
Trigger: CATATCAAGGGCAGAGTTCAAACATTTTGAAATGAG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAACTTGTGTCCTTTCCATaGGTTACTGAGGACCATTGC +
Preference number: 3 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKLVSFP*VTEDHC
Trigger: GCAATGGTCCTCAGTAACCAATGGAAAGGACACAAG...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGAAAAAGAAGGTGAAGTaGACTGGGCTGGAGCCATCT +
Preference number: 3 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQKKKVK*TGLEPS
Trigger: AGATGGCTCCAGCCCAGTCAACTTCACCTTCTTTTT...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp TGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTaGCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAG +
Preference number: 3 (lower is better)
Translates to: WTQGFRTHGLYI*PLRLLCKMRKK
Trigger: CTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp ACATTCCACATAGCAGCACAGCCTTTTGGGCATCTTTaGAGTTTTAGACGGAGCTTCTGGAGTCACAGAGCC +
Preference number: 3 (lower is better)
Translates to: TFHIAAQPFGHL*SFRRSFWSHRA
Trigger: GGCTCTGTGACTCCAGAAGCTCCGTCTAAAACTCCAAAGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGTTCGGTGTCTGCTTTaGCAGCTAGGTCGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFVRCLL*QLGRLL
Trigger: GAGGAGCCGACCTAGCTGCAAAAGCAGACACCGAAC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTCAAATGAGGTCCTTTaGATGAGGATTAGGAGAAAA +
Preference number: 3 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEISNEVL*MRIRRK
Trigger: TTTTCTCCTAATCCTCATCAAAAGGACCTCATTTGA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGTCAAATGAGGTCCTTTaGATGAGGATTAGGAGAAAA +
Preference number: 3 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQSNEVL*MRIRRK
Trigger: TTTTCTCCTAATCCTCATCAAAAGGACCTCATTTGA...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAACAATTTAAAGAGCAATaGAGAAGAGTCCCACATCCA +
Preference number: 3 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEQFKEQ*RRVPHP
Trigger: TGGATGTGGGACTCTTCTCAATTGCTCTTTAAATTG...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGATTTTCTTTTCCTCTTaGACACCTTTCTTCCCTGTC +
Preference number: 3 (lower is better)
Translates to: PGAHVVGSNLAADGLISTIFFSS*TPFFPV
Trigger: GACAGGGAAGAAAGGTGTCAAAGAGGAAAAGAAAAT...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTTTTTTCAGTCCCCAGTaGAGTACTGTGGTGTGGGGG +
Preference number: 3 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASFFSPQ*STVVWG
Trigger: CCCCCACACCACAGTACTCAACTGGGGACTGAAAAA...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GACACAGTGGAACACCTCATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAACCCAATCATGTACGGTaGTGCCAACTGAACCACAAT +
Preference number: 3 (lower is better)
Translates to: DTVEHLICCVVCPNDTDEPNHVR*CQLNHN
Trigger: ATTGTGGTTCAGTTGGCACAACCGTACATGATTGGG...TTCATCCGTATCGTTGGGACACACAACACAGCAAATGAGGTGTTCCACTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR CAA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCATTTGCTTGTGTGCATTaGTGGCACTTCCTCTGTGGC +
Preference number: 3 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSFACVH*WHFLCG
Trigger: GCCACAGAGGAAGTGCCACAAATGCACACAAGCAAA...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GAGGCAGGCTGCCTTTCAAAAGTTACTGACTGCCAGGACTTGCAGGAGACTTTACACAATCAGCAATTGTaGCAACATTCTCCATGGGAA +
Preference number: 3 (lower is better)
Translates to: EAGCLSKVTDCQDLQETLHNQQL*QHSPWE
Trigger: TTCCCATGGAGAATGTTGCAACAATTGCTGATTGTG...TAAAGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR CAA 90 bp ATTCTTAGTGTCCCCATTCAGCAAGGCATTTCGGCTCCGACTGACTCCTTCAATTGGCACAATCAGCAATaGTTGCAACATTCTCCATGG +
Preference number: 3 (lower is better)
Translates to: ILSVPIQQGISAPTDSFNWHNQQ*LQHSPW
Trigger: CCATGGAGAATGTTGCAACAATTGCTGATTGTGCCA...ATTGAAGGAGTCAGTCGGAGCCGAAATGCCTTGCTGAATGGGGACACTAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR GCA 72 bp GGGCTGTTGTCAGGAAAAATATGCAGAATCAATGGCTaGAGCTGCCAAAACAAATGGAGTATGCCCACCTCT +
Preference number: 3 (lower is better)
Translates to: GLLSGKICRING*SCQNKWSMPTS
Trigger: AGAGGTGGGCATACTCCATTTGTTTTGGCAGCTGCAGCCATTGATTCTGCATATTTTTCCTGACAACAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 72 bp GTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAATaGGGAAGAAGCCGCATCGTGCTCACAAATAATACA +
Preference number: 3 (lower is better)
Translates to: VCTSARLGCSAK*GRSRIVLTNNT
Trigger: TGTATTATTTGTGAGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 72 bp CTCGGTATATGTTTATCTACATGGACTTCGGAACAGTaGATTAGCAGCGGGCATAGTAACTATTTCCTTGTC +
Preference number: 3 (lower is better)
Translates to: LGICLSTWTSEQ*ISSGHSNYFLV
Trigger: GACAAGGAAATAGTTACTATGCCCGCTGCTAATTCACTGTTCCGAAGTCCATGTAGATAAACATATACCGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTTGCCTGGGTGGTGGTaGCCATGGCGCCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRLPGWW*PWRPCV
Trigger: GACACAAGGGCGCCATGGTCACCACCACCCAGGCAA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGCTGCAGACCTGCCCTaGCCGGGCCGTGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPAADLP*PGRARP
Trigger: AGGTCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGCATCGCTGCAGACCTaGCCTGCCCGGGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEASLQT*PARAVP
Trigger: GGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTGCAGCAGACTGGCCTaGGAGATGCCAGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRCSRLA*EMPGCW
Trigger: CCAGCACCCTGGCATCTCCCAGGCCAGTCTGCTGCA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCCTCCGCCTCGCCTCTaGAACCGGTCTTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRPPPRL*NRSFLQ
Trigger: TTGGAGGAAAGACCGGTTGCAGAGGCGAGGCGGAGG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCATGCACCTGTCCCCTaGCTCTGCATGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRHAPVP*LCMSPA
Trigger: TGCTGGGCTCATGCAGAGGCAGGGGACAGGTGCATG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCAGAGGCCGGAGCTCTaGGGACAGCGGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEQRPEL*GQRRGR
Trigger: CCTGCCCCTCCGCTGTCCCCAGAGCTCCGGCCTCTG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGCCCGGGGCTGGGGGCTaGCAGAGTCAGCAACCATGC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEPGAGG*QSQQPC
Trigger: GCATGGTTGCTGACTCTGTCAGCCCCCAGCCCCGGG...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCGAAGACCCAAGGACTaGAGTGCTGCTCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRRRPKD*SAAHVP
Trigger: TGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGGTTACTGAGGACCATTaGCCTCATGGGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRVTEDH*PHGPRP
Trigger: TGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAAC...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTTGGGGCCAGCACTGTaGAAAGGATGGGTGAGCACG +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRLGPAL*KGWVST
Trigger: CGTGCTCACCCATCCTTTGCACAGTGCTGGCCCCAA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGTCGCAACGCCTCCTCTaGGCCAGGGCCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAESQRLL*ARARAS
Trigger: AGAGGCCCTGGCCCTGGCGCAGAGGAGGCGTTGCGA...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCAGAGGCCGGAGCTCTaGGGACAGCGGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPQRPEL*GQRRGR
Trigger: CCTGCCCCTCCGCTGTCCCCAGAGCTCCGGCCTCTG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 72 bp GAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTaGCCCGAGCCCACCAAGTCACACCAGGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ETPAQGGDRFLP*PEPTKSHQARC
Trigger: GCAGCGGGCCTGGTGTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTCCCAACGATACGGATaGAGGAGGCAGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSQRYG*RRQAAF
Trigger: AAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGAGCCTCCTCCCATTATaGAATGCCTGGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSLLPL*NAWHPR
Trigger: CCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCT...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCCCGGGGCTGGGGGCTaGCAGAGTCAGCAACCATGC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPPGAGG*QSQQPC
Trigger: GCATGGTTGCTGACTCTGTCAGCCCCCAGCCCCGGG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGGGGTGCAGCCTCTCTaGAGGTCACTGTGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPGVQPL*RSLWRA
Trigger: CGCCCTCCACAGTGACCTTCAGAGAGGCTGCACCCC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGCTGCTCACGTGCCATaGCGTCCTGGGGAGACTCCC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEAAHVP*RPGETP
Trigger: GGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGAGGGGACTGGAGGGTTaGAGATGCAGGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGERGLEG*RCRAGQ
Trigger: CTGCCCGGCCCTGCATCTGCAACCCTCCAGTCCCCT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGAGCACAGGAGGGCTCTaGGTGCTCTGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGESTGGL*VLCGQG
Trigger: CCCCTGCCCACAGAGCACGCAGAGCCCTCCTGTGCT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCATCAGGGGCTGTGGTaGAGGAGCAGCCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEHQGLW*RSSHQG
Trigger: GCCCTGGTGGCTGCTCCTGCACCACAGCCCCTGATG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTGGGCGGCCGGGCTGTaGTCCCTGAGGACCTTACTG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPWAAGL*SLRTLL
Trigger: CAGTAAGGTCCTCAGGGAGCACAGCCCGGCCGCCCA...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGCTGACCGGCCAGGCTaGTGTCCCCTGTCCCCGATT +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEADRPG*CPLSPI
Trigger: AATCGGGGACAGGGGACACCAGCCTGGCCGGTCAGC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGGGCTGGCCTGGGCATaGGGGAGCTTATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEGLAWA*GSLSPR
Trigger: TCGGGGAGATAAGCTCCCCCATGCCCAGGCCAGCCC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTCCCATTTCTTTGCCTaGGTGGTGGTGACCATGGCG +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSHFFA*VVVTMA
Trigger: CGCCATGGTCACCACCACCCAGGCAAAGAAATGGGA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCTAGGACTAGGGCACTaGCCGCACCCTCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGELGLGH*PHPQAQ
Trigger: CTGGGCCTGAGGGTGCGGCCAGTGCCCTAGTCCTAG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGAGGAGACAGCAGTCCTaGAGGCCTCACAACATTCAG +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRRRQQS*RPHNIQ
Trigger: CTGAATGTTGTGAGGCCTTCAGGACTGCTGTCTCCT...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGGCCAGGGAGCACCGTaGCCAGTGGTGGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPGQGAP*PVVVTE
Trigger: CTCTGTGACCACCACTGGTCACGGTGCTCCCTGGCC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGAGGAGACCGTTTCCTaGCGTTGCCCGAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEEETVS*RCPSPP
Trigger: TGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGCCCTCCCAGCCACGTaGCAGCCCATCCCATCATCA +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEALPAT*QPIPSS
Trigger: TGATGATGGGATGGGCTGGCACGTGGCTGGGAGGGC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCAGCTACCGGGGAGGATaGAGAGCTGCAGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVSYRGG*RAADPG
Trigger: GCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCT...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTTGGCAACCCGGGGCTaGGGGCTGACAGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGELATRG*GLTESA
Trigger: TGCTGACTCTGTCAGCCCCCAGCCCCGGGTTGCCAA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGAGCTCTCTGGCTAATTaGCAACCCGGGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAESSLAN*QPGAGG
Trigger: GCCCCCAGCCCCGGGTTGCCAATTAGCCAGAGAGCT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGAGGGGGAGGCGAGCTaGCAGCGCGGCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSEGEAS*QRGCEG
Trigger: TCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGGGCTGGCCTGGGCATaGGGGAGCTTATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPGLAWA*GSLSPR
Trigger: TCGGGGAGATAAGCTCCCCCATGCCCAGGCCAGCCC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGGACCATTGCCCTCATaGGCCCAGGCCACAGGCACC +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPGPLPS*AQATGT
Trigger: GGTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGGGCGCACCAAGGCCTaGAGAGCCTTGGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEGRTKA*RALGRD
Trigger: ATCTCTCCCCAAGGCTCTCCAGGCCTTGGTGCGCCC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 72 bp GGTCACTGTGGAGGGCGCACCAAGGCCTGGAGAGCCTaGGGGAGAGATCAGGCCCCACAGACCTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GHCGGRTKAWRA*GRDQAPQTWKL
Trigger: GAGCTTCCAGGTCTGTGGGGCCTGATCTCTCCCCAAGGCTCTCCAGGCCTTGGTGCGCCCTCCACAGTGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGACTCAGCCACACGAGTaGCTATTAACTCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRTQPHE*LLTPVS
Trigger: GGACACTGGAGTTAATAGTCACTCGTGTGGCTGAGT...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCCTGTTCCCTGGAGATaGGGTCCTTGCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPPVPWR*GPCPGV
Trigger: CACACCAGGGCAAGGACCTCATCTCCAGGGAACAGG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGTTGCCTGGGTGGTGGTaGCCATGGCGCCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPLPGWW*PWRPCV
Trigger: GACACAAGGGCGCCATGGTCACCACCACCCAGGCAA...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGACCGTTTCCTGCCGTTaGCCGAGCCCACCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGETVSCR*PSPPSH
Trigger: GTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGCAGTGCTGCTCACGTaGCATGCCGTCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPAVLLT*HAVLGR
Trigger: TCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCACCCAAGGACTGCAGTaGTGCTCACGTGCCATGCCG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPTQGLQ*CSRAMP
Trigger: CGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGT...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCCTCCCATTATGAAATaGCTGGCATCCCAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRPPIMK*LASQEC
Trigger: ACACTCCTGGGATGCCAGGCATTTCATAATGGGAGG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACAGGAGGGCTCTGCGTaGTCTGTGGGCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAQEGSA*SVGRGL
Trigger: CAGTCCCCTGCCCACAGAGCACGCAGAGCCCTCCTG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGCCGAGCTGCCAAGCTaGTATCTCGTTCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEAELPS*YLVPGA
Trigger: TGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGGCCCAGGGGAGAAGTaGTCTGTAGGACCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPGPGEK*SVGPAR
Trigger: CCTGGCTGGTCCTACAGAGCACTTCTCCCCTGGGCC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGCCCTCCCAGCCACGTaGCAGCCCATCCCATCATCA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPALPAT*QPIPSS
Trigger: TGATGATGGGATGGGCTGGCACGTGGCTGGGAGGGC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCTCCATGTTGGCTTGTTaGCCCTGGGGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPSMLAC*PWGWPG
Trigger: CCCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGA...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTTACTGGCAGCACCCTaGCCTGCTGACCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVLLAAP*PADPGS
Trigger: GCTTCCAGGGTCAGCAGGGCAGGGTGCTGCCAGTAA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGAGTTGGAGCCTGGGCTaGAGGGTAGTGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGESWSLG*RVVSCH
Trigger: GTGGCAGCTCACTACCCTCCAGCCCAGGCTCCAACT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGAACCCGTGTCCTTTTaGAGTCCAGGGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEEPVSF*SPGQAP
Trigger: GGGAGCCTGCCCTGGACTCCAAAAGGACACGGGTTC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAGGGCTGAGGGCTCTGTaGTGCCCAGGAGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGGLRAL*CPGALP
Trigger: TGGGAGGGCTCCTGGGCACCACAGAGCCCTCAGCCC...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGCCTCCACTCTCTGCTaGGCTGAGGGCTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPASTLC*AEGSVV
Trigger: CACCACAGAGCCCTCAGCCCAGCAGAGAGTGGAGGC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCCCCGACCAGGGGCTTaGCCATGTCTCCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPPRPGA*PCLLHN
Trigger: GTTGTGAAGGAGACATGGCCAAGCCCCTGGTCGGGG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCCCCCGACCAGGGGCTTaGCCATGTCTCCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVPRPGA*PCLLHN
Trigger: GTTGTGAAGGAGACATGGCCAAGCCCCTGGTCGGGG...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGAAGGCCGTGGGGCTTaGGGCCAGCACTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPEGRGA*GQHCAK
Trigger: CTTTGCACAGTGCTGGCCCCAAGCCCCACGGCCTTC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCTGGGTGCAGCAGACTaGCCTGGGAGATGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPLGAAD*PGRCQG
Trigger: ACCCTGGCATCTCCCAGGCCAGTCTGCTGCACCCAG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCAGGTGTGTAGCTCCTaGCTGCAGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPQVCSS*LQGLLH
Trigger: GTGGAGGAGGCCCTGCAGCCAGGAGCTACACACCTG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCCCAATTCCGCTCAGATaGGCACCCTCGCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVPIPLR*APSPSW
Trigger: CCAGGAAGGCGAGGGTGCCCATCTGAGCGGAATTGG...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACTAGGACTAGGGCACTaGCCGCACCCTCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWALGLGH*PHPQAQ
Trigger: CTGGGCCTGAGGGTGCGGCCAGTGCCCTAGTCCTAG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGGCAGAGATCAGAGCTaGGGGGATAGGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPGRDQS*GDRKQL
Trigger: GAGCTGCTTCCTATCCCCTCAGCTCTGATCTCTGCC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCTGGCAGCGCGGCTGTaGGGGAATGAGACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPLAARL*GNETLP
Trigger: TGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCCCTGGTGTGTGGTGTaGCACACCTTGACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEPWCVV*HTLTWP
Trigger: AGGCCAAGTCAAGGTGTGTCACACCACACACCAGGG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGCCTGTTCCCTGGAGATaGGGTCCTTGCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPPVPWR*GPCPGV
Trigger: CACACCAGGGCAAGGACCTCATCTCCAGGGAACAGG...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTTTGCCTGGGTGGTGGTaGCCATGGCGCCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALLPGWW*PWRPCV
Trigger: GACACAAGGGCGCCATGGTCACCACCACCCAGGCAA...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGTCCAGCCCCAGGTATaGCTGGATCCGTGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPVQPQV*LDPCQR
Trigger: TCGCTGACACGGATCCAGTCATACCTGGGGCTGGAC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTGCCTCCTTTATTGGTaGTGCCGGTTGGGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVCLLYW*CRLGER
Trigger: ACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTCACACCAGGCCCGCTaGCTCCTTTATTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVSHQAR*LLYWCC
Trigger: GCAGCACCAATAAAGGAGGCAGCGGGCCTGGTGTGA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGCAAGGACTGCAGTGCTaGTCACGTGCCATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPQGLQC*SRAMPS
Trigger: GGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTG...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCGAAGACCCAAGGACTaGAGTGCTGCTCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPRRPKD*SAAHVP
Trigger: TGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGGAACGTGTCCACCCTaGCCCGGTAGCCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALGTCPP*PGSPLM
Trigger: CATCAGAGGGCTACCGGGGCAGGGTGGACACGTTCC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGGGAGGATGGAGAGCTaGAGACCCTGGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPGRMES*RPWLLL
Trigger: GAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGAGGTCAGCAGCATGCTaGTTCAGGCCAAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAERSAAC*FRPRAS
Trigger: AGAGGCCCTTGGCCTGAAGCAGCATGCTGCTGACCT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCCAAGGTCAGCAGCATaGTGCTTCAGGCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPPRSAA*CFRPRA
Trigger: GGCCCTTGGCCTGAAGCAGCATGCTGCTGACCTTGG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGGAGGGAATGAGACTTTaGCATCAGTCCTCACCAATG +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVREGMRL*HQSSPM
Trigger: CATTGGTGAGGACTGATGGCAAAGTCTCATTCCCTC...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAGGCCCAGGGGAGAAGTaGTCTGTAGGACCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAGPGEK*SVGPAR
Trigger: CCTGGCTGGTCCTACAGAGCACTTCTCCCCTGGGCC...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGTTACTGAGGACCATTaGCCTCATGGGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEVTEDH*PHGPRP
Trigger: TGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAAC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCTGCATGGACACAGCTaGTGCCCAGCACACACCCTA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGELHGHS*CPAHTL
Trigger: TAGGGTGTGTGCTGGGCAGCAGCTGTGTCCATGCAG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGCTGCCACGGCATCGCTaGAGACCTGCCCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQLPRHR*RPALPG
Trigger: CCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAG...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCTCCGCACCCCTCTCTaGGCCACCGCCCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTLRTPL*ATAPLA
Trigger: GGCCAAGGGGGCGGTGGCGCAGAGAGGGGTGCGGAG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000481247.6
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCCTCTGAGACCAAGCTaGGACACAGACGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEPLRPS*DTDASS
Trigger: GGAAGAGGCGTCTGTGTCGCAGCTTGGTCTCAGAGG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATGGGGGAGCGTGAGTTaGAGCCTGGGCTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAWGSVS*SLGWRV
Trigger: TACCCTCCAGCCCAGGCTCCAACTCACGCTCCCCCA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCAGGAGACATGCACGATaGGTCTCTGTCCCCGCAAGC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVRRHAR*VSVPAS
Trigger: GCTTGCGGGGACAGAGACCCATCGTGCATGTCTCCT...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCACGCTGATGGGCAGGTaGCTGCCTCTCCAATGCTTC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVTLMGR*LPLQCF
Trigger: GAAGCATTGGAGAGGCAGCCACCTGCCCATCAGCGT...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACGTGCCATGCCGTCCTaGGGAGACTCCCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWARAMPS*GDSQAD
Trigger: ATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGATCAGGGTTGCAGGTTaGCGCCGAAGACCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEIRVAG*RRRPKD
Trigger: GTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGAT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTGTGCAGGAGCTCTCTaGCTAATTGGCAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGECAGAL*LIGNPG
Trigger: CCCCGGGTTGCCAATTAGCCAGAGAGCTCCTGCACA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACTGTGGGCAGGGGACTaGAGGGTTGCAGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWALWAGD*RVADAG
Trigger: CCCTGCATCTGCAACCCTCCAGTCCCCTGCCCACAG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGCTCTGCGTGCTCTGTaGGCAGGGGACTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALALRAL*AGDWRV
Trigger: AACCCTCCAGTCCCCTGCCCACAGAGCACGCAGAGC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAGCCTCCACTCTCTGCTaGGCTGAGGGCTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAASTLC*AEGSVV
Trigger: CACCACAGAGCCCTCAGCCCAGCAGAGAGTGGAGGC...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGGACCATTGCCCTCATaGGCCCAGGCCACAGGCACC +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSGPLPS*AQATGT
Trigger: GGTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCGAAGGGTGGGGGTGCTaGCCACCTCCCATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVEGWGC*PPPISL
Trigger: CAAAGAAATGGGAGGTGGCCAGCACCCCCACCCTTC...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGGGCCGTGCCCGACCTaGGCATCGCTCGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIGPCPT*ASLGGA
Trigger: AGCTCCTCCGAGCGATGCCCAGGTCGGGCACGGCCC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCTCGGAGCGTCCTCAGTaGTGCAGCCAAGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPSERPQ*CSQEPG
Trigger: TCCTGGCTCTTGGCTGCACCACTGAGGACGCTCCGA...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGGGCCATGAGGCCTCTTaGGGACTATTTCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRGHEAS*GLFQFF
Trigger: AAAGAACTGAAATAGTCCCCAAGAGGCCTCATGGCC...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCCTGAGGGAGATGAGCTaGTGCCGTCCCCTCCCAATT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVLREMS*CRPLPI
Trigger: AATTGGGAGGGGACGGCACCAGCTCATCTCCCTCAG...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCCTGGGAAGACCCCATaGCCTCCAGCAGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPPGKTP*PPAGLR
Trigger: TCTGAGACCTGCTGGAGGCCATGGGGTCTTCCCAGG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTGGGAGTCGAGCTGCTaGCCGGCCAGGCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIWESSC*PARLVS
Trigger: GGACACCAGCCTGGCCGGTCAGCAGCTCGACTCCCA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGCCCCGGTAGCCCTCTaGTGTCTGCCATCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALAPVAL*CLPSCV
Trigger: AACACAGGATGGCAGACATCAGAGGGCTACCGGGGC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCAGCCTCCTCCCATTATaGAATGCCTGGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPSLLPL*NAWHPR
Trigger: CCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCT...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCGCGGCTGTGAGGGAATaGGACTTTGCCATCAGTCCT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVAAVRE*DFAISP
Trigger: AGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGC...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTTGGTGTGACACACCTTaGCTTGGCCTCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALWCDTP*LGLQAQ
Trigger: CTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCA...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTCAAAAGTTACTGACTaGCAGGACTTGCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSKVTD*QDLQET
Trigger: AGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGCTCCTTTATTGGTGCTaGCGGTTGGGGGAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPLLYWC*RLGERE
Trigger: CTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAG...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCCCCATTCCTAAAGGGTaGCTCCAGGTAGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVPIPKG*LQVAKA
Trigger: GGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGG...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGTCCTTTGATCAGGGTTaGAGGTTGGCGCCGAAGACC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAESFDQG*RLAPKT
Trigger: GGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGA...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTCCTTTGATCAGGGTTaGAGGTTGGCGCCGAAGACC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGESFDQG*RLAPKT
Trigger: GGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGAGGTCAGCAGCATGCTaGTTCAGGCCAAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPRSAAC*FRPRAS
Trigger: AGAGGCCCTTGGCCTGAAGCAGCATGCTGCTGACCT...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGATGCGAGGCCGAGCTaGCAAGCTGCTATCTCGTTC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPDARPS*QAAISF
Trigger: GAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGAGATCTGGAAGGGCATaGCCCGAAGGAAAGAACCGC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAERSGRA*PEGKNR
Trigger: GCGGTTCTTTCCTTCGGGGCATGCCCTTCCAGATCT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCCACGAAAAGAGTTCCTaGCCCAGTCAGAAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVHEKSS*PSQKAP
Trigger: AGGGGCCTTCTGACTGGGGCAGGAACTCTTTTCGTG...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGACCCTCCCCAGAGCTaGCAGAAGGTGACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPDPPQS*QKVTLK
Trigger: CTTCAAAGTCACCTTCTGGCAGCTCTGGGGAGGGTC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCAGCACACACCCTACCTaGCCTACACTCTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPSTHPT*PTLSVH
Trigger: GTGGACTGAGAGTGTAGGGCAGGTAGGGTGTGTGCT...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGCATGGACACAGCTGCTaGCCAGCACACACCCTACCT +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPHGHSC*PAHTLP
Trigger: AGGTAGGGTGTGTGCTGGGCAGCAGCTGTGTCCATG...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTAGGGAGATGAGCTGGTaGCGTCCCCTCCCAATTCCG +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALREMSW*RPLPIP
Trigger: CGGAATTGGGAGGGGACGGCACCAGCTCATCTCCCT...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTCAAAGTGGACACAGTaGAACACCTCATTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSKWTQ*NTSFAV
Trigger: CACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGCTGACCGGCCAGGCTaGTGTCCCCTGTCCCCGATT +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPADRPG*CPLSPI
Trigger: AATCGGGGACAGGGGACACCAGCCTGGCCGGTCAGC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGACGCTGATGGGCAGGTaGCTGCCTCTCCAATGCTTC +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPTLMGR*LPLQCF
Trigger: GAAGCATTGGAGAGGCAGCCACCTGCCCATCAGCGT...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGAGAGCTGCAGACCCTaGCTTCTCCTCAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPESCRP*LLLRNV
Trigger: CACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCTTGGCAACCCGGGGCTaGGGGCTGACAGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSLATRG*GLTESA
Trigger: TGCTGACTCTGTCAGCCCCCAGCCCCGGGTTGCCAA...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGTGTGCAGGAGCTCTCTaGCTAATTGGCAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPCAGAL*LIGNPG
Trigger: CCCCGGGTTGCCAATTAGCCAGAGAGCTCCTGCACA...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTCTGCGTGCTCTGTaGGCAGGGGACTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSALRAL*AGDWRV
Trigger: AACCCTCCAGTCCCCTGCCCACAGAGCACGCAGAGC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGTGAGACTGCCCTGCTaGGTGCTGGCTGCATGGACA +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALVRLPC*VLAAWT
Trigger: TGTCCATGCAGCCAGCACCCAGCAGGGCAGTCTCAC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATCGGAGCGTCCTCAGTaGTGCAGCCAAGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWASERPQ*CSQEPG
Trigger: TCCTGGCTCTTGGCTGCACCACTGAGGACGCTCCGA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCTAGCTGGAAGGCCGTaGGGCTTGGGGCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHLAGRP*GLGPAL
Trigger: CAGTGCTGGCCCCAAGCCCCACGGCCTTCCAGCTAG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCAATGGTGTGTCGGGTaGGGCGGCTCTTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALQWCVG*GGSSMH
Trigger: GTGCATGGAAGAGCCGCCCCACCCGACACACCATTG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCCCCTTCCGCGAGGTTaGAGCATTATGCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEPLPRG*SIMPGT
Trigger: TGTTCCTGGCATAATGCTCCAACCTCGCGGAAGGGG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTAGCCTGGCTTCTGACTaGAAGCTCGCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALSLASD*KLAGCS
Trigger: GCTGCACCCAGCGAGCTTCCAGTCAGAAGCCAGGCT...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACAGGTGTGTAGCTCCTaGCTGCAGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSQVCSS*LQGLLH
Trigger: GTGGAGGAGGCCCTGCAGCCAGGAGCTACACACCTG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGCTGGGGCTCATGTGGTaGGGAGCAATTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPLGLMW*GAIWQQ
Trigger: CTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAG...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGCCCTTGCATCAGAGTaGCCTGGGAGGTACACACAT +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEALASE*PGRYTH
Trigger: ATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAAACCCAGGCCTGGCATaGTCCCTGCCCTTGCATCAG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWANPGLA*SLPLHQ
Trigger: CTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTT...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 72 bp CCCACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTaGGCGCCGAAGACCCAAGGACTGCAGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PTPSPSFDQGCR*APKTQGLQCCS
Trigger: TGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGGGAAATCCATATTTATaGGCCAGGCTCAAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRGNPYL*ARLKKS
Trigger: GGACTTTTTGAGCCTGGCTCATAAATATGGATTTCC...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGAGGAGACAGCAGTCCTaGAGGCCTCACAACATTCAG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGERRQQS*RPHNIQ
Trigger: CTGAATGTTGTGAGGCCTTCAGGACTGCTGTCTCCT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGCTTTCTCCTCCGCCTaGGTGTTTGCGTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPAFSSA*VFACHF
Trigger: AAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCCCGGGGCTGGGGGCTaGCAGAGTCAGCAACCATGC +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTPGAGG*QSQQPC
Trigger: GCATGGTTGCTGACTCTGTCAGCCCCCAGCCCCGGG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCATGGTGTGACACACCTTaGCTTGGCCTCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSWCDTP*LGLQAQ
Trigger: CTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCA...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGATCTGCACAGCAGTTTaGCAACTGGGGCGACAGCAT +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEICTAV*QLGRQH
Trigger: ATGCTGTCGCCCCAGTTGTCAAACTGCTGTGCAGAT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGCTCTTTCCTCCTCCCTaGTGGAAGCCAGAGACCTAC +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPLFPPP*WKPETY
Trigger: GTAGGTCTCTGGCTTCCATCAGGGAGGAGGAAAGAG...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGGACCAGGGAGCGTGTaGTGGAGAGATTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPGPGSV*WRDFSL
Trigger: CAGTGAGAAATCTCTCCATCACACGCTCCCTGGTCC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGCTTCCTCCTGTTCCCTaGGCCTGGGCTAGATTAGAG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPLPPVP*AWARLE
Trigger: CTCTAATCTAGCCCAGGCGCAGGGAACAGGAGGAAG...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACCTCTGTGGCCCAAGTaGCAGGATGAGCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSPLWPK*QDELHP
Trigger: CGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTACGGAGTCCCAGTTCTaGGTTCCTGACGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALTESQF*VPDADG
Trigger: CCCATCAGCGTCAGGAACGCAGAACTGGGACTCCGT...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAGGGAGGATGGAGAGCTaGAGACCCTGGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGGRMES*RPWLLL
Trigger: GAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCC...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGAAGCAGCTCAGCCCTaGAGCTGGAGCTACCGGGGA +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPEAAQP*SWSYRG
Trigger: TCCCCGGTAGCTCCAGCTGCAGGGCTGAGCTGCTTC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCAGGAGGGCTCTGCGTaGTCTGTGGGCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNQEGSA*SVGRGL
Trigger: CAGTCCCCTGCCCACAGAGCACGCAGAGCCCTCCTG...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGAGCACAGGAGGGCTCTaGGTGCTCTGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQSTGGL*VLCGQG
Trigger: CCCCTGCCCACAGAGCACGCAGAGCCCTCCTGTGCT...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGATCTGGAAGGGCATaGCCCGAAGGAAAGAACCGC +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPRSGRA*PEGKNR
Trigger: GCGGTTCTTTCCTTCGGGGCATGCCCTTCCAGATCT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGCATCGCTGCAGACCTaGCCTGCCCGGGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAASLQT*PARAVP
Trigger: GGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGAGTATGCCCACCTCTaGCACGGCATCGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSEYAHL*HGIAAD
Trigger: GTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACAAACAAAGACCTGCTaGCTCCGCCCCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGQTKTC*LRPSSL
Trigger: GAGGGAGGAGGGGCGGAGGCAGCAGGTCTTTGTTTG...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTGTGTAGCTCCTGGCTaGAGGGCCTCCTCCACCCCC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEICVAPG*RASSTP
Trigger: GGGGGTGGAGGAGGCCCTGCAGCCAGGAGCTACACA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACAGACCTGGAAGCTCTaGCCCAGTATCCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSQTWKL*PSIPQP
Trigger: AGGCTGGGGGATACTGGGGCAGAGCTTCCAGGTCTG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTCCCCCTTTACAACTTaGGCTCCATACTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSPFTT*APYFIV
Trigger: AACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACGCTGCCTCCTTTATTaGTGCTGCCGGTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSRCLLY*CCRLGE
Trigger: CTCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGCTTGTGTGCATTTGTaGCACTTCCTCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPACVHL*HFLCGP
Trigger: TGGGCCACAGAGGAAGTGCCACAAATGCACACAAGC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGCTTGTGTGCATTTGTaGCACTTCCTCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEACVHL*HFLCGP
Trigger: TGGGCCACAGAGGAAGTGCCACAAATGCACACAAGC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTATCAGGGTTGCAGGTTaGCGCCGAAGACCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALIRVAG*RRRPKD
Trigger: GTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGAT...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGAGAGCTGCAGACCCTaGCTTCTCCTCAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALESCRP*LLLRNV
Trigger: CACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGCTACCGGGGAGGATaGAGAGCTGCAGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPSYRGG*RAADPG
Trigger: GCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCT...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGGAGGGACAGAGATCTaGAAGGGCATGCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSGGTEI*KGMPRR
Trigger: CCTTCGGGGCATGCCCTTCCAGATCTCTGTCCCTCC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGATCGCTTTGGTCCTGGTaGCCCAGGGGAGAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGSLWSW*PRGEVL
Trigger: GAGCACTTCTCCCCTGGGCCACCAGGACCAAAGCGA...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATGGGACATAAACCCCTaGGGCTCATGTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAWDINP*GSCGGE
Trigger: CTCCCCACCACATGAGCCCCAGGGGTTTATGTCCCA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACCTGGGAAGACCCCATaGCCTCCAGCAGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGPGKTP*PPAGLR
Trigger: TCTGAGACCTGCTGGAGGCCATGGGGTCTTCCCAGG...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGAAGGGGCGAAGAGGGTaGCTGTTACTCATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEKGRRG*LLLILW
Trigger: CCACAAGATGAGTAACAGCCACCCTCTTCGCCCCTT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
3UTR CAA 72 bp TCCAGGCTGCCCGGGGACTTTCTGGTAGCCACTCACTaGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SRLPGDFLVATH*SLFPGDEVLAL
Trigger: CAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTACCAGAAAGTCCCCGGGCAGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGCATGCCTCTATAATTaGGGTCCATATCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEACLYN*GPYPGS
Trigger: AGAGCCGGGATATGGACCTCAATTATAGAGGCATGC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGCATGCCTCTATAATTaGGGTCCATATCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPACLYN*GPYPGS
Trigger: AGAGCCGGGATATGGACCTCAATTATAGAGGCATGC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCGCATGCCTCTATAATTaGGGTCCATATCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVACLYN*GPYPGS
Trigger: AGAGCCGGGATATGGACCTCAATTATAGAGGCATGC...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTACGGTTGTGCCAACTaGACCACAATCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEYGCAN*TTIAPL
Trigger: AAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGATCCATGTCAGGAATaGCAGGTGAGTAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEDPCQE*QVSNSA
Trigger: GGCTGAGTTACTCACCTGTCATTCCTGACATGGATC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGCCCTCACCCTCCTTTaGTCAGGGTTGCAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPALTLL*SGLQVG
Trigger: GCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGCCTGGGAAAGGAGGTaGACCCGTGTCCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSAWERR*TRVLLE
Trigger: CTCCAAAAGGACACGGGTTCACCTCCTTTCCCAGGC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTTCACAACGGCTCCTGTaGGACTGCCCTGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPSQRLL*DCPAGC
Trigger: GCACCCAGCAGGGCAGTCTCACAGGAGCCGTTGTGA...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACAGAGGACGTGAACGATaGCGTGGGCCCAGGTCGGAA +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHRGRER*RGPRSE
Trigger: TTCCGACCTGGGCCCACGTCATCGTTCACGTCCTCT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCGGGGTGCAGCCTCTCTaGAGGTCACTGTGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFGVQPL*RSLWRA
Trigger: CGCCCTCCACAGTGACCTTCAGAGAGGCTGCACCCC...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGCTCTCTTGGGCTCATaGGGCTGTAGAATGCAGTGT +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPALLGS*GCRMQC
Trigger: ACACTGCATTCTACAGCCTCATGAGCCCAAGAGAGC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649492.1
CDS-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGTTTCCTCCTTCTGGCTaGTCTGCTGCTCTGGACACT +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPFPPSG*SAALDT
Trigger: AGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAA...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTCCTTTATTGGTGCTaGCGGTTGGGGGAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGLLYWC*RLGERE
Trigger: CTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAG...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCACCGTTTCCTGCCGTTaGCCGAGCCCACCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPTVSCR*PSPPSH
Trigger: GTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGT...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGAGTGCCAGGATGAGCTaGATCCGTGTCTCATTTAGG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGESARMS*IRVSFR
Trigger: CCTAAATGAGACACGGATGCAGCTCATCCTGGCACT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGAAAGCTTCTTGGAACTaGTATTTTTCAGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRKASWN*YFSVPS
Trigger: ACTGGGGACTGAAAAATAGCAGTTCCAAGAAGCTTT...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGCAGTGCTGCTCACGTaGCATGCCGTCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNAVLLT*HAVLGR
Trigger: TCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGCAGTGCTGCTCACGTaGCATGCCGTCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIAVLLT*HAVLGR
Trigger: TCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGAAGCAGCTCAGCCCTaGAGCTGGAGCTACCGGGGA +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIEAAQP*SWSYRG
Trigger: TCCCCGGTAGCTCCAGCTGCAGGGCTGAGCTGCTTC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCAGGGGACTGGAGGGTTaGAGATGCAGGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFRGLEG*RCRAGQ
Trigger: CTGCCCGGCCCTGCATCTGCAACCCTCCAGTCCCCT...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCAGGAGGGCTCTGCGTaGTCTGTGGGCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTQEGSA*SVGRGL
Trigger: CAGTCCCCTGCCCACAGAGCACGCAGAGCCCTCCTG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGTATTCCTTTTCAGATaGGAGGCCGAGCTGCCAAGC +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPVFLFR*EAELPS
Trigger: GCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATAC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCACGAAAAGAGTTCCTaGCCCAGTCAGAAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALHEKSS*PSQKAP
Trigger: AGGGGCCTTCTGACTGGGGCAGGAACTCTTTTCGTG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATTCCATGTTGGCTTGTTaGCCCTGGGGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNSMLAC*PWGWPG
Trigger: CCCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGA...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGACCCTCCCCAGAGCTaGCAGAAGGTGACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALDPPQS*QKVTLK
Trigger: CTTCAAAGTCACCTTCTGGCAGCTCTGGGGAGGGTC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACTGCATGGACACAGCTaGTGCCCAGCACACACCCTA +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSLHGHS*CPAHTL
Trigger: TAGGGTGTGTGCTGGGCAGCAGCTGTGTCCATGCAG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGGGGTGGTTCATAGCTaGTTCAAGTCCAAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEGVVHS*FKSKVL
Trigger: GAGCACTTTGGACTTGAAGCAGCTATGAACCACCCC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCACTGCCACGGCATCGCTaGAGACCTGCCCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPLPRHR*RPALPG
Trigger: CCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAG...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGAGCGTCCTCAGTGGTaGAGCCAAGAGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHERPQW*SQEPGR
Trigger: CCTTCCTGGCTCTTGGCTGCACCACTGAGGACGCTC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCATGCACCTGTCCCCTaGCTCTGCATGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHHAPVP*LCMSPA
Trigger: TGCTGGGCTCATGCAGAGGCAGGGGACAGGTGCATG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGAGGTTGGAGCATTATaGCAGGAACAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEEVGAL*QEQVFP
Trigger: AGGGAACACCTGTTCCTGGCATAATGCTCCAACCTC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCCGCTTAGGTTGCTCTaGAAAATGAGGAAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPPLRLL*KMRKKP
Trigger: CGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTTGGGGGAGCGTGAGTTaGAGCCTGGGCTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCWGSVS*SLGWRV
Trigger: TACCCTCCAGCCCAGGCTCCAACTCACGCTCCCCCA...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACATTGGTGCTGCCGGTTaGGGGAGCGTGAGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHIGAAG*GSVSWS
Trigger: GCTCCAACTCACGCTCCCCCAACCGGCAGCACCAAT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCCGTGCCATGCCGTCCTaGGGAGACTCCCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIRAMPS*GDSQAD
Trigger: ATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACG...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATTTGGCAACCCGGGGCTaGGGGCTGACAGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNLATRG*GLTESA
Trigger: TGCTGACTCTGTCAGCCCCCAGCCCCGGGTTGCCAA...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTCCTTTGTCCCCATCTaGGTAGAAAACACACTGGGG +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVSFVPI*VENTLG
Trigger: CCCCAGTGTGTTTTCTACCCAGATGGGGACAAAGGA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGCTGTGGGCAGGGGACTaGAGGGTTGCAGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQLWAGD*RVADAG
Trigger: CCCTGCATCTGCAACCCTCCAGTCCCCTGCCCACAG...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGCTCTGCGTGCTCTGTaGGCAGGGGACTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNALRAL*AGDWRV
Trigger: AACCCTCCAGTCCCCTGCCCACAGAGCACGCAGAGC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGAACCCGTGTCCTTTTaGAGTCCAGGGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPEPVSF*SPGQAP
Trigger: GGGAGCCTGCCCTGGACTCCAAAAGGACACGGGTTC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGCCTCCACTCTCTGCTaGGCTGAGGGCTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQASTLC*AEGSVV
Trigger: CACCACAGAGCCCTCAGCCCAGCAGAGAGTGGAGGC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCGGACCATTGCCCTCATaGGCCCAGGCCACAGGCACC +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFGPLPS*AQATGT
Trigger: GGTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCC...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGTGCCCTGCTGGGTGCTaGCTGCATGGACACAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQCPAGC*LHGHSC
Trigger: GCAGCTGTGTCCATGCAGCCAGCACCCAGCAGGGCA...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGAAGGTGAAGTTGACTaGGCTGGAGCCATCTGCACA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPEGEVD*AGAICT
Trigger: TGTGCAGATGGCTCCAGCCCAGTCAACTTCACCTTC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAGCACTGTGCAAAGGATaGGTGAGCACGCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGALCKG*VSTLSL
Trigger: GAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGC...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTGAAGGCCGTGGGGCTTaGGGCCAGCACTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPEGRGA*GQHCAK
Trigger: CTTTGCACAGTGCTGGCCCCAAGCCCCACGGCCTTC...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAACTAGCTGGAAGGCCGTaGGGCTTGGGGCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPELAGRP*GLGPAL
Trigger: CAGTGCTGGCCCCAAGCCCCACGGCCTTCCAGCTAG...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGAGAAACGCCAAAGGCTaGGAGGCTCTTGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPRNAKG*EALVLW
Trigger: CCAGAGAACAAGAGCCTCCCAGCCTTTGGCGTTTCT...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTTTAGACGGAGCTTCTaGAGTCACAGAGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVFRRSF*SHRAIP
Trigger: GGGAATGGCTCTGTGACTCCAGAAGCTCCGTCTAAA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGACTCTCCTGTCCCTTTaGAGCTGCAATGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPTLLSL*SCNGHS
Trigger: ACTGTGGCCATTGCAGCTCCAAAGGGACAGGAGAGT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649492.1
3UTR CAA 72 bp GGTGGTGGTGACCATGGCGCCCTTGTGTCCTTTCCATaGGTTACTGAGGACCATTGCCCTCATGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGGDHGALVSFP*VTEDHCPHGPR
Trigger: CCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGGACACAAGGGCGCCATGGTCACCACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 72 bp GAGCCAGATGAAGGGCACCTGGCCCCTTCCGCGAGGTaGGAGCATTATGCCAGGAACAGGTGTTCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: EPDEGHLAPSAR*EHYARNRCSLY
Trigger: GTACAGGGAACACCTGTTCCTGGCATAATGCTCCAACCTCGCGGAAGGGGCCAGGTGCCCTTCATCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GCCTCCTTTATTGGTGCTGCCGGTTGGGGGAGCGTGAGTTGGAGCCTGGGCTGGATTTCTGCTTCAGGCTaGGACTCTCGCATTCCACCA +
Preference number: 4 (lower is better)
Translates to: ASFIGAAGWGSVSWSLGWISASG*DSRIPP
Trigger: TGGTGGAATGCGAGAGTCTCAGCCTGAAGCAGAAAT...CCAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACATTTCGGCTCCGACTaGCTCCTTCAATCACACTGG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAHFGSD*LLQSHW
Trigger: CCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAATG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAATGGGAGTCGAGCTGCTaGCCGGCCAGGCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKWESSC*PARLVS
Trigger: GGACACCAGCCTGGCCGGTCAGCAGCTCGACTCCCA...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCCATTTTCTCCCCCTTaGGACCTGCCTGATTTGGAT +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPPFSPP*DLPDLD
Trigger: ATCCAAATCAGGCAGGTCTCAAGGGGGAGAAAATGG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGTGTATTCCAGCAGAATaGACACTCTATGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAECIPAE*TLYGGP
Trigger: TGGGCCTCCATAGAGTGTTCATTCTGCTGGAATACA...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCCAGTGTCCACAGGTTaGTTTGCTTGTGTGCATTTG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPPVSTG*FACVHL
Trigger: CAAATGCACACAAGCAAATCAACCTGTGGACACTGG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCCAGTGTCCACAGGTTaGTTTGCTTGTGTGCATTTG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEPVSTG*FACVHL
Trigger: CAAATGCACACAAGCAAATCAACCTGTGGACACTGG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGACTCAGCCACACGAGTaGCTATTAACTCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPTQPHE*LLTPVS
Trigger: GGACACTGGAGTTAATAGTCACTCGTGTGGCTGAGT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGGCAGAGATCAGAGCTaGGGGGATAGGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHGRDQS*GDRKQL
Trigger: GAGCTGCTTCCTATCCCCTCAGCTCTGATCTCTGCC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAAGCCTCCTCCCATTATaGAATGCCTGGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGSLLPL*NAWHPR
Trigger: CCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCT...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTTTGAACTCTGCCCTTaGTATGACTGTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVFELCP*YDCLAP
Trigger: AGGAGCCAGACAGTCATATCAAGGGCAGAGTTCAAA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTTGGTGTGACACACCTTaGCTTGGCCTCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCWCDTP*LGLQAQ
Trigger: CTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCA...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCTTTCCATTGGTTACTaGGGACCATTGCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPLSIGY*GPLPSW
Trigger: CCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTTGTGCAAAGGATGGGTaGGCACGCTGTCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPCAKDG*ARCPSE
Trigger: CTCCGAGGGACAGCGTGCTCACCCATCCTTTGCACA...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACAAGAAGACACGAAGCTaGTGGGGCAGGAGGGCCGTT +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHKKTRS*WGRRAV
Trigger: AACGGCCCTCCTGCCCCATCAGCTTCGTGTCTTCTT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTATCAACGTCTCCAGTaGCCCAGGGCCCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIYQRLQ*PRAQSL
Trigger: CAGGGACTGGGCCCTGGGTCACTGGAGACGTTGATA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTCCAGCGATGCTCCTCTaGGACCAAGCTGCGACACAG +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPPAMLL*DQAATQ
Trigger: CTGTGTCGCAGCTTGGTCTCAGAGGAGCATCGCTGG...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481247.6
CDS-3UTR GCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATCCTTCTGGCTGCTCTaGTGCTCTGGACACTCAAAG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWASFWLL*CSGHSK
Trigger: CTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCCTCCTTTATTGGTGCTaGCGGTTGGGGGAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPLLYWC*RLGERE
Trigger: CTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAG...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGAGGAGACCGTTTCCTaGCGTTGCCCGAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCEETVS*RCPSPP
Trigger: TGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGGGAGGATGGAGAGCTaGAGACCCTGGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQGRMES*RPWLLL
Trigger: GAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGCCGAGCTGCCAAGCTaGTATCTCGTTCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQAELPS*YLVPGA
Trigger: TGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGCTAGGGCCGAGGCTTTaGAGCGTATTCCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPLGPRL*SVFLFR
Trigger: TCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAG...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACACGAAAAGAGTTCCTaGCCCAGTCAGAAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGHEKSS*PSQKAP
Trigger: AGGGGCCTTCTGACTGGGGCAGGAACTCTTTTCGTG...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGGCCCAGGGGAGAAGTaGTCTGTAGGACCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEGPGEK*SVGPAR
Trigger: CCTGGCTGGTCCTACAGAGCACTTCTCCCCTGGGCC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACACCTCCCATTTCTTTaGCTGGGTGGTGGTGACCAT +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAHLPFL*LGGGDH
Trigger: ATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACCTGTCCCCTGCCTCTaGATGAGCCCAGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSPVPCL*MSPAEN
Trigger: ATTTTCTGCTGGGCTCATGCAGAGGCAGGGGACAGG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTAGGGAGATGAGCTGGTaGCGTCCCCTCCCAATTCCG +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCREMSW*RPLPIP
Trigger: CGGAATTGGGAGGGGACGGCACCAGCTCATCTCCCT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACACGGTTTGTACATCTaGCCGCTTAGGTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAHGLYI*PLRLLC
Trigger: GCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCATCAATTTCCCCCACTaGAGTAAAGGGGCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPINFPH*SKGAKR
Trigger: CCTCTTCGCCCCTTTACTGCAGTGGGGGAAATTGAT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTGCAATGTTTTCTTCTaGTATGAGCATGCCTCTATA +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRCNVFF*YEHASI
Trigger: TATAGAGGCATGCTCATACCAGAAGAAAACATTGCA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGATGGTCCACTGTTGCTaGTTGGTAGAAACCTCAACG +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEMVHCC*LVETST
Trigger: CGTTGAGGTTTCTACCAACCAGCAACAGTGGACCAT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGAGTTGGAGCCTGGGCTaGAGGGTAGTGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQSWSLG*RVVSCH
Trigger: GTGGCAGCTCACTACCCTCCAGCCCAGGCTCCAACT...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCAGTTGGAGCCTGGGCTaGAGGGTAGTGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEISWSLG*RVVSCH
Trigger: GTGGCAGCTCACTACCCTCCAGCCCAGGCTCCAACT...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCCCAAGCTTAAAGGCTaGATCCATGTCAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEPKLKG*IHVRND
Trigger: GTCATTCCTGACATGGATCCAGCCTTTAAGCTTGGG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGATTGAGTACTGTGGTGTaGGGGAAGCACGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGLSTVV*GKHGVP
Trigger: TGGGACTCCGTGCTTCCCCCACACCACAGTACTCAA...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGAGGTCGCTTTGGTCCTaGTGGCCCAGGGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQRSLWS*WPRGEV
Trigger: CACTTCTCCCCTGGGCCACCAGGACCAAAGCGACCT...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGGGCTGAGGGCTCTGTaGTGCCCAGGAGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAGLRAL*CPGALP
Trigger: TGGGAGGGCTCCTGGGCACCACAGAGCCCTCAGCCC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGCCCCGACCAGGGGCTTaGCCATGTCTCCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQPRPGA*PCLLHN
Trigger: GTTGTGAAGGAGACATGGCCAAGCCCCTGGTCGGGG...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACATGAAAAGTGAAGGGTaGGGGTGCTGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHMKSEG*GCWPPP
Trigger: GGGAGGTGGCCAGCACCCCCACCCTTCACTTTTCAT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTGTGAGACTGCCCTGCTaGGTGCTGGCTGCATGGACA +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPVRLPC*VLAAWT
Trigger: TGTCCATGCAGCCAGCACCCAGCAGGGCAGTCTCAC...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCGGGCCGTGCCCGACCTaGGCATCGCTCGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSGPCPT*ASLGGA
Trigger: AGCTCCTCCGAGCGATGCCCAGGTCGGGCACGGCCC...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCAGCCCCAGGTATGACTaGATCCGTGTCAGCGAGAGA +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSSPRYD*IRVSER
Trigger: TCTCTCGCTGACACGGATCCAGTCATACCTGGGGCT...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACCCCTTCCGCGAGGTTaGAGCATTATGCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSPLPRG*SIMPGT
Trigger: TGTTCCTGGCATAATGCTCCAACCTCGCGGAAGGGG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGAGGGCCGTTCAGCCTaGCTTCTGACTGGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIEGRSA*LLTGSS
Trigger: CGAGCTTCCAGTCAGAAGCCAGGCTGAACGGCCCTC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGGAGCGACTGTCCACTaGCTTTCAAAGGCGGCACTC +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHGATVH*LSKAAL
Trigger: GAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCTGGGACATAAACCCCTaGGGCTCATGTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPWDINP*GSCGGE
Trigger: CTCCCCACCACATGAGCCCCAGGGGTTTATGTCCCA...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGGACCCCTGGCCTCCTaGCGCCCCTCCAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQGPLAS*RPSRVS
Trigger: TGAGACTCTGGAGGGGCGCCAGGAGGCCAGGGGTCC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCAACCCAGGCCTGGCATaGTCCCTGCCCTTGCATCAG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEINPGLA*SLPLHQ
Trigger: CTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTT...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCTTGAGAGGACTTCCTaGGCATTCCTATCCATAAAC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGELERTS*AFLSIN
Trigger: GTTTATGGATAGGAATGCTCAGGAAGTCCTCTCAAG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGCCCAAGTGCCAGGATaGGCTGCATCCGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCAQVPG*AASVSH
Trigger: ATGAGACACGGATGCAGCTCATCCTGGCACTTGGGC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGCCCAAGTGCCAGGATaGGCTGCATCCGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIAQVPG*AASVSH
Trigger: ATGAGACACGGATGCAGCTCATCCTGGCACTTGGGC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGATCCATGTCAGGAATaGCAGGTGAGTAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALDPCQE*QVSNSA
Trigger: GGCTGAGTTACTCACCTGTCATTCCTGACATGGATC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGCCCTCACCCTCCTTTaGTCAGGGTTGCAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEALTLL*SGLQVG
Trigger: GCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTTTCTAGAGCGCAGCTaGTATGTCTTTGACACACCT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVFLERS*YVFDTP
Trigger: AGGTGTGTCAAAGACATATCAGCTGCGCTCTAGAAA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAACTCTGCCCTTGATATaGCTGTCTGGCTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWATLPLI*LSGSFV
Trigger: GACAAAGGAGCCAGACAGTCATATCAAGGGCAGAGT...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCTTTGAACTCTGCCCTTaGTATGACTGTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPFELCP*YDCLAP
Trigger: AGGAGCCAGACAGTCATATCAAGGGCAGAGTTCAAA...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGCGGCTGTGAGGGAATaGGACTTTGCCATCAGTCCT +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHAAVRE*DFAISP
Trigger: AGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCTGGCAGCGCGGCTGTaGGGGAATGAGACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFLAARL*GNETLP
Trigger: TGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGCCTGGGAAAGGAGGTaGACCCGTGTCCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCAWERR*TRVLLE
Trigger: CTCCAAAAGGACACGGGTTCACCTCCTTTCCCAGGC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCAATAATAATGAAAAGTaGAGGGTGGGGGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPNNNEK*RVGVLA
Trigger: GGCCAGCACCCCCACCCTTCACTTTTCATTATTATT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGGTCCAGCCCCAGGTATaGCTGGATCCGTGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTVQPQV*LDPCQR
Trigger: TCGCTGACACGGATCCAGTCATACCTGGGGCTGGAC...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCAGAGGACGTGAACGATaGCGTGGGCCCAGGTCGGAA +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFRGRER*RGPRSE
Trigger: TTCCGACCTGGGCCCACGTCATCGTTCACGTCCTCT...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGTTCAGCCTGGCTTCTaGCTGGAAGCTCGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCVQPGF*LEARWV
Trigger: CACCCAGCGAGCTTCCAGTCAGAAGCCAGGCTGAAC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGACAAAATGTGCACATaGTCAATTTCCCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEDKMCT*SISPTA
Trigger: TGCAGTGGGGGAAATTGATCATGTGCACATTTTGTC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGCACTGGGTTATACTCTaGCTAAAAGTACCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEHWVIL*LKVPLK
Trigger: CTTCAGGGGTACTTTTAGGCAGAGTATAACCCAGTG...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314100.10
CDS-3UTR GCA 90 bp GCCTCCTTTATTGGTGCTGCCGGTTGGGGGAGCGTGAGTTGGAGCCTGGGCTGGTTGGAGAGGAATTTCTaGTTCAGGCTGAGACTCTCG +
Preference number: 4 (lower is better)
Translates to: ASFIGAAGWGSVSWSLGWLERNF*FRLRLS
Trigger: CGAGAGTCTCAGCCTGAAGCAGAAATTCCTCTCCAA...CCAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCTCATCTGTCAGCGTTaGCCGCCCAGTGTAGATATA +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALLICQR*PPSVDI
Trigger: TATATCTACACTGGGCGGGCAACGCTGACAGATGAG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTCAAAAGTTACTGACTaGCAGGACTTGCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVSKVTD*QDLQET
Trigger: AGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGATTCTGGCTGCTCTGCTaGTCTGGACACTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGFWLLC*SGHSKW
Trigger: CCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAA...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCTTTCCTCCTTCTGGCTaGTCTGCTGCTCTGGACACT +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSFPPSG*SAALDT
Trigger: AGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAA...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCGGGCAGGCAATGTTGTaGGCAGTTACCCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFGQAML*AVTQGR
Trigger: CCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGAAGACCCAAGGACTaGAGTGCTGCTCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNRRPKD*SAAHVP
Trigger: TGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCG...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCCAAGGTCAGCAGCATaGTGCTTCAGGCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCPRSAA*CFRPRA
Trigger: GGCCCTTGGCCTGAAGCAGCATGCTGCTGACCTTGG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGATGCGAGGCCGAGCTaGCAAGCTGCTATCTCGTTC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQDARPS*QAAISF
Trigger: GAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGAGGGAATGAGACTTTaGCATCAGTCCTCACCAATG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPEGMRL*HQSSPM
Trigger: CATTGGTGAGGACTGATGGCAAAGTCTCATTCCCTC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTCATGGACACAGCTGCTaGCCAGCACACACCCTACCT +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPHGHSC*PAHTLP
Trigger: AGGTAGGGTGTGTGCTGGGCAGCAGCTGTGTCCATG...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAGGGGTGGTTCATAGCTaGTTCAAGTCCAAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAGVVHS*FKSKVL
Trigger: GAGCACTTTGGACTTGAAGCAGCTATGAACCACCCC...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCCTCCGCCTCGCCTCTaGAACCGGTCTTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFPPPRL*NRSFLQ
Trigger: TTGGAGGAAAGACCGGTTGCAGAGGCGAGGCGGAGG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGAGCGTCCTCAGTGGTaGAGCCAAGAGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEERPQW*SQEPGR
Trigger: CCTTCCTGGCTCTTGGCTGCACCACTGAGGACGCTC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGGGGCGGCTCTTCCATaGACCTGTCCCCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQGAALP*TCPLPL
Trigger: CAGAGGCAGGGGACAGGTGCATGGAAGAGCCGCCCC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGTGTGTAGCTCCTGGCTaGAGGGCCTCCTCCACCCCC +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQCVAPG*RASSTP
Trigger: GGGGGTGGAGGAGGCCCTGCAGCCAGGAGCTACACA...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCTTACTGGCAGCACCCTaGCCTGCTGACCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCLLAAP*PADPGS
Trigger: GCTTCCAGGGTCAGCAGGGCAGGGTGCTGCCAGTAA...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTCTGCAGTGGTGTCTTaGAGAGGAATTTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVSAVVS*RGISAS
Trigger: TGAAGCAGAAATTCCTCTCCAAGACACCACTGCAGA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCATTGGTGCTGCCGGTTaGGGGAGCGTGAGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCIGAAG*GSVSWS
Trigger: GCTCCAACTCACGCTCCCCCAACCGGCAGCACCAAT...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCGCTGCCTCCTTTATTaGTGCTGCCGGTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFRCLLY*CCRLGE
Trigger: CTCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCAGGAGACATGCACGATaGGTCTCTGTCCCCGCAAGC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIRRHAR*VSVPAS
Trigger: GCTTGCGGGGACAGAGACCCATCGTGCATGTCTCCT...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGCTCAGCCCTGCAGCTaGAGCTACCGGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAAQPCS*SYRGGW
Trigger: CCATCCTCCCCGGTAGCTCCAGCTGCAGGGCTGAGC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAATCGCTTTGGTCCTGGTaGCCCAGGGGAGAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPESLWSW*PRGEVL
Trigger: GAGCACTTCTCCCCTGGGCCACCAGGACCAAAGCGA...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGTGTTTAGGTCGCTTTaGTCCTGGTGGCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNVFRSL*SWWPRG
Trigger: TCCCCTGGGCCACCAGGACCAAAGCGACCTAAACAC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCATGAAAAGTGAAGGGTaGGGGTGCTGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIMKSEG*GCWPPP
Trigger: GGGAGGTGGCCAGCACCCCCACCCTTCACTTTTCAT...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCTCTTTATCACCAAGTaGCCTCAGTACACAGAACGC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPLFITK*PQYTER
Trigger: GCGTTCTGTGTACTGAGGCCACTTGGTGATAAAGAG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCAGAAACGCCAAAGGCTaGGAGGCTCTTGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSRNAKG*EALVLW
Trigger: CCAGAGAACAAGAGCCTCCCAGCCTTTGGCGTTTCT...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAAAGGGGCGAAGAGGGTaGCTGTTACTCATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSKGRRG*LLLILW
Trigger: CCACAAGATGAGTAACAGCCACCCTCTTCGCCCCTT...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481247.6
3UTR CAA 72 bp GGAGGGGCAGCTAAGCCACGGCAGTCCCCGGCAGGTTaGGCCACGCCAGAACTCGGTATATGTTTATCTACA +
Preference number: 4 (lower is better)
Translates to: GGAAKPRQSPAG*ATPELGICLST
Trigger: TGTAGATAAACATATACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTGCCGTGGCTTAGCTGCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 72 bp GTCCTTGCCCTGGTGTGTGGTGTGACACACCTTGACTaGGCCTCCAGGCCCAGCTGGACACACGAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: VLALVCGVTHLD*ASRPSWTHEKS
Trigger: ACTCTTTTCGTGTGTCCAGCTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCACACACCAGGGCAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTTGATAATGGATGGCTaGCCTAGCTTAATCTCGATG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGELIMDG*PSLISM
Trigger: CATCGAGATTAAGCTAGGTCAGCCATCCATTATCAA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGCCATTGACACTTCAATaGAGTATGAGTAAGACCGGC +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPPLTLQ*SMSKTG
Trigger: GCCGGTCTTACTCATACTTCATTGAAGTGTCAATGG...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACCTTTCAAAAGTTACTaGCTGCCAGGACTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAPFKSY*LPGLAG
Trigger: TCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTCCCAACGATACGGATaGAGGAGGCAGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEISQRYG*RRQAAF
Trigger: AAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ATTTCGGCTCCGACTGACTCCTTCAATCACACTGGCACAATCAGCAATTGTTGCTGGGAGTCGAGCTGCTaGCCGGCCAGGCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: ISAPTDSFNHTGTISNCCWESSC*PARLVS
Trigger: GGACACCAGCCTGGCCGGTCAGCAGCTCGACTCCCA...GCAACAATTGCTGATTGTGCCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCTCTGTCCCCGCAAGCTaGACCGTTCAAAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPSVPAS*TVQNQG
Trigger: TCCTTGGTTTTGAACGGTTCAGCTTGCGGGGACAGA...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGCCACCATCGTCAAATaGGGTCCTTTTGATGAGGAT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALATIVK*GPFDED
Trigger: ATCCTCATCAAAAGGACCTCATTTGACGATGGTGGC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGGGCCTCTGGGCAGGTaGTGCCCATGTTTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPGPLGR*CPCLKR
Trigger: TCTTTTTAAACATGGGCATCACCTGCCCAGAGGCCC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGATCAGTCCTCACCAATaGCATCTACTGTTAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPISPHQ*HLLLVP
Trigger: TGGCACTAACAGTAGATGTCATTGGTGAGGACTGAT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGCGGCTGTGAGGGAATaGGACTTTGCCATCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNAAVRE*DFAISP
Trigger: AGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGCCTGGGAAAGGAGGTaGACCCGTGTCCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCAWERR*TRVLLE
Trigger: CTCCAAAAGGACACGGGTTCACCTCCTTTCCCAGGC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAATCACAACGGCTCCTGTaGGACTGCCCTGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKSQRLL*DCPAGC
Trigger: GCACCCAGCAGGGCAGTCTCACAGGAGCCGTTGTGA...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCATTCACTCTGCAAATaGCCAGGGCCTCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHHSLCK*PGPPNP
Trigger: GGGATTTGGAGGCCCTGGTCATTTGCAGAGTGAATG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGGACCAGGGAGCGTGTaGTGGAGAGATTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCGPGSV*WRDFSL
Trigger: CAGTGAGAAATCTCTCCATCACACGCTCCCTGGTCC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCCAATTCGAATATACCTaGAGACACGGGCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVQFEYT*RHGLEN
Trigger: ATTTTCCAGCCCGTGTCTGCAGGTATATTCGAATTG...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGCCCATTCCTAAAGGGTaGCTCCAGGTAGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQPIPKG*LQVAKA
Trigger: GGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGG...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGTCCACAGGTTGATTTaGTTGTGTGCATTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPVHRLI*LCAFVA
Trigger: TGCCACAAATGCACACAAGCAAATCAACCTGTGGAC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCACGGAGTCCCAGTTCTaGGTTCCTGACGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCTESQF*VPDADG
Trigger: CCCATCAGCGTCAGGAACGCAGAACTGGGACTCCGT...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGCTGCTCACGTGCCATaGCGTCCTGGGGAGACTCCC +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFAAHVP*RPGETP
Trigger: GGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGTCCTTTGATCAGGGTTaGAGGTTGGCGCCGAAGACC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQSFDQG*RLAPKT
Trigger: GGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGA...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTAGGGGACTGGAGGGTTaGAGATGCAGGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFRGLEG*RCRAGQ
Trigger: CTGCCCGGCCCTGCATCTGCAACCCTCCAGTCCCCT...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGTATTCCTTTTCAGATaGGAGGCCGAGCTGCCAAGC +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPVFLFR*EAELPS
Trigger: GCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATAC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTTCCATGTTGGCTTGTTaGCCCTGGGGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRASMLAC*PWGWPG
Trigger: CCCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGA...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCCTGTCAGCCTCACCTaGCACCTCTCTCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFPVSLT*HLSPCW
Trigger: CCAACATGGAGAGAGGTGGCAGGTGAGGCTGACAGG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTGCTGCAGACCTGCCCTaGCCGGGCCGTGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASAADLP*PGRARP
Trigger: AGGTCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGC...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTAAAACAAATGGAGTATaGCCACCTCTGCCACGGCAT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALKTNGV*PPLPRH
Trigger: ATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTT...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGTGCAGAATCAATGGCTaGAGCTGCCAAAACAAATGG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPCRING*SCQNKW
Trigger: CCATTTGTTTTGGCAGCTGCAGCCATTGATTCTGCA...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGCCTGTCCCCTGCCTCTaGATGAGCCCAGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQPVPCL*MSPAEN
Trigger: ATTTTCTGCTGGGCTCATGCAGAGGCAGGGGACAGG...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAATGGAAGCTCGCTGGGTaGAGCAGACTGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKWKLAG*SRLAWE
Trigger: CTCCCAGGCCAGTCTGCTGCACCCAGCGAGCTTCCA...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCCATCAGGGGCTGTGGTaGAGGAGCAGCCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSHQGLW*RSSHQG
Trigger: GCCCTGGTGGCTGCTCCTGCACCACAGCCCCTGATG...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTGGGCGGCCGGGCTGTaGTCCCTGAGGACCTTACTG +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSWAAGL*SLRTLL
Trigger: CAGTAAGGTCCTCAGGGAGCACAGCCCGGCCGCCCA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTTGATGAGGCTCCCTTaGAACAATAAACATGAACCC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGELMRLP*NNKHEP
Trigger: GGGTTCATGTTTATTGTTCCAAGGGAGCCTCATCAA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314100.10
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGAAGTGAGTAGAGACTaGCAACATCAAAAGTCATGC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEEVSRD*QHQKSC
Trigger: GCATGACTTTTGATGTTGCCAGTCTCTACTCACTTC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCTTCTGTCAGCAACCATaGTCCACTGTTGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSFCQQP*STVAGW
Trigger: CCAACCAGCAACAGTGGACCATGGTTGCTGACAGAA...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCTCAAAGTGGACACAGTaGAACACCTCATTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPSKWTQ*NTSFAV
Trigger: CACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGA...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGCTGACCGGCCAGGCTaGTGTCCCCTGTCCCCGATT +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFADRPG*CPLSPI
Trigger: AATCGGGGACAGGGGACACCAGCCTGGCCGGTCAGC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTTGAGTACTGTGGTGTaGGGGAAGCACGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEILSTVV*GKHGVP
Trigger: TGGGACTCCGTGCTTCCCCCACACCACAGTACTCAA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAATCAGGGTTGCAGGTTaGCGCCGAAGACCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEIRVAG*RRRPKD
Trigger: GTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGAT...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGCTGTGGGCAGGGGACTaGAGGGTTGCAGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQLWAGD*RVADAG
Trigger: CCCTGCATCTGCAACCCTCCAGTCCCCTGCCCACAG...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGGAGGGGGAGGCGAGCTaGCAGCGCGGCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMEGEAS*QRGCEG
Trigger: TCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTC...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCGTGTTTAGGTCGCTTTaGTCCTGGTGGCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFVFRSL*SWWPRG
Trigger: TCCCCTGGGCCACCAGGACCAAAGCGACCTAAACAC...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCAGCAGTTTGACAACTaGGGCGACAGCATAATACTG +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALQQFDN*GDSIIL
Trigger: CAGTATTATGCTGTCGCCCCAGTTGTCAAACTGCTG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACTCTTTATCACCAAGTaGCCTCAGTACACAGAACGC +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWALFITK*PQYTER
Trigger: GCGTTCTGTGTACTGAGGCCACTTGGTGATAAAGAG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGGCAGAAAATCCTAGCTaGAAGGCCGTGGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTAENPS*KAVGLG
Trigger: CCCAAGCCCCACGGCCTTCCAGCTAGGATTTTCTGC...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCACTGGGTGCAGCAGACTaGCCTGGGAGATGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPLGAAD*PGRCQG
Trigger: ACCCTGGCATCTCCCAGGCCAGTCTGCTGCACCCAG...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCTGGGGCTCATGTGGTaGGGAGCAATTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCLGLMW*GAIWQQ
Trigger: CTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAGCACCCTCGCCTTCCTaGGACATAAACCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPAPSPS*DINPWG
Trigger: GCCCCAGGGGTTTATGTCCCAGGAAGGCGAGGGTGC...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATGCATCAGAGTGGCCTaGGAGGTACACACATCTTTA +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWACIRVA*EVHTSL
Trigger: TAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGCATTTTCACACACATaGACTCAGGGGTTTCGAACA +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPAFSHT*TQGFRT
Trigger: TGTTCGAAACCCCTGAGTCCATGTGTGTGAAAATGC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 72 bp TCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTaGCAGCTAGGTCGGCTCCTCCCTGGAAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SVLGRKPVRCLL*QLGRLLPGKGQ
Trigger: CTGCCCCTTTCCAGGGAGGAGCCGACCTAGCTGCAAAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCATTTCTGCTTCAGGCTaGGACTCTCGCATTCCACCA +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPISASG*DSRIPP
Trigger: TGGTGGAATGCGAGAGTCTCAGCCTGAAGCAGAAAT...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGTCATGCAGACATTCTaGATGTTAAGTATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPVMQTF*MLSMVQ
Trigger: CTGCACCATACTTAACATTCAGAATGTCTGCATGAC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTGCATGATTTCAGCATaGTTCTCCTTTGAATTGTGC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVCMISA*FSFELC
Trigger: GCACAATTCAAAGGAGAATCATGCTGAAATCATGCA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGTGCATGATTTCAGCATaGTTCTCCTTTGAATTGTGC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAECMISA*FSFELC
Trigger: GCACAATTCAAAGGAGAATCATGCTGAAATCATGCA...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCAGGAGACAGCAGTCCTaGAGGCCTCACAACATTCAG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIRRQQS*RPHNIQ
Trigger: CTGAATGTTGTGAGGCCTTCAGGACTGCTGTCTCCT...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACACTTCAATGAAGTATaGGTAAGACCGGCTATCTCG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAHFNEV*VRPAIS
Trigger: CGAGATAGCCGGTCTTACTCATACTTCATTGAAGTG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp TGCCTCCTTTATTGGTGCTGCCGGTTGGGGGAGCGTGAGTTGGAGCCTGGGCTGCCATTGACACTTCAATaGAGTATGAGTAAGACCGGC +
Preference number: 4 (lower is better)
Translates to: CLLYWCCRLGERELEPGLPLTLQ*SMSKTG
Trigger: GCCGGTCTTACTCATACTTCATTGAAGTGTCAATGG...CAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCAATGATCTATCACTCTaGCCCAATCAAGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPNDLSL*PNQVHP
Trigger: TGGATGAACTTGATTGGGTCAGAGTGATAGATCATT...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGAATGATCTATCACTCTaGCCCAATCAAGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGENDLSL*PNQVHP
Trigger: TGGATGAACTTGATTGGGTCAGAGTGATAGATCATT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTTCTGTCCCCGCAAGCTaGACCGTTCAAAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPSVPAS*TVQNQG
Trigger: TCCTTGGTTTTGAACGGTTCAGCTTGCGGGGACAGA...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACCAGTGTCCACAGGTTaGTTTGCTTGTGTGCATTTG +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSPVSTG*FACVHL
Trigger: CAAATGCACACAAGCAAATCAACCTGTGGACACTGG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCACTCTGCCCTTGATATaGCTGTCTGGCTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPTLPLI*LSGSFV
Trigger: GACAAAGGAGCCAGACAGTCATATCAAGGGCAGAGT...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGGGCCTCTGGGCAGGTaGTGCCCATGTTTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQGPLGR*CPCLKR
Trigger: TCTTTTTAAACATGGGCATCACCTGCCCAGAGGCCC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTATCTGCACAGCAGTTTaGCAACTGGGGCGACAGCAT +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCICTAV*QLGRQH
Trigger: ATGCTGTCGCCCCAGTTGTCAAACTGCTGTGCAGAT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCTCTTTCCTCCTCCCTaGTGGAAGCCAGAGACCTAC +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFLFPPP*WKPETY
Trigger: GTAGGTCTCTGGCTTCCATCAGGGAGGAGGAAAGAG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTTATCAACGTCTCCAGTaGCCCAGGGCCCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAYQRLQ*PRAQSL
Trigger: CAGGGACTGGGCCCTGGGTCACTGGAGACGTTGATA...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGGTTGCTCTGCAAAATaGGGAAGAAGCCGCATCGTG +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQGCSAK*GRSRIV
Trigger: CACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAGACAAAATGTGCACATaGTCAATTTCCCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWADKMCT*SISPTA
Trigger: TGCAGTGGGGGAAATTGATCATGTGCACATTTTGTC...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCTGCAATGGCCACAGTaGTGGCCACTTGCCACATGT +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCLQWPQ*WPLATC
Trigger: ACATGTGGCAAGTGGCCATCACTGTGGCCATTGCAG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649492.1
CDS-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAACCATGGTCCACTGTTaGTGGTTGGTAGAAACCTCA +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGTMVHC*WLVETS
Trigger: TGAGGTTTCTACCAACCAGCAACAGTGGACCATGGT...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTACCGTTTCCTGCCGTTaGCCGAGCCCACCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRATVSCR*PSPPSH
Trigger: GTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGT...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCCCATTCCTAAAGGGTaGCTCCAGGTAGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCPIPKG*LQVAKA
Trigger: GGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGTTGATTTGCTTGTGTaGATTTGTGGCACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPVDLLV*ICGTSS
Trigger: AGAGGAAGTGCCACAAATGCACACAAGCAAATCAAC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGGAACGTGTCCACCCTaGCCCGGTAGCCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFGTCPP*PGSPLM
Trigger: CATCAGAGGGCTACCGGGGCAGGGTGGACACGTTCC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGAAGCAGCTCAGCCCTaGAGCTGGAGCTACCGGGGA +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFEAAQP*SWSYRG
Trigger: TCCCCGGTAGCTCCAGCTGCAGGGCTGAGCTGCTTC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGCCGAGCTGCCAAGCTaGTATCTCGTTCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAAELPS*YLVPGA
Trigger: TGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGTATTCCTTTTCAGATaGGAGGCCGAGCTGCCAAGC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIVFLFR*EAELPS
Trigger: GCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATAC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCTAGGGCCGAGGCTTTaGAGCGTATTCCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHLGPRL*SVFLFR
Trigger: TCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCGCCCTCCCAGCCACGTaGCAGCCCATCCCATCATCA +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSALPAT*QPIPSS
Trigger: TGATGATGGGATGGGCTGGCACGTGGCTGGGAGGGC...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCAGCACACACCCTACCTaGCCTACACTCTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCSTHPT*PTLSVH
Trigger: GTGGACTGAGAGTGTAGGGCAGGTAGGGTGTGTGCT...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCATCAATGGCTGCAGCTaGCAAAACAAATGGAGTATG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPINGCS*QNKWSM
Trigger: CATACTCCATTTGTTTTGGCAGCTGCAGCCATTGAT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTTCCAGTTGTCCTGCATaGCATTTAAACCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALSSCPA*HLNLAL
Trigger: AAGGGCAAGGTTTAAATGGCATGCAGGACAACTGGA...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGCAAACAAAGACCTGCTaGCTCCGCCCCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQQTKTC*LRPSSL
Trigger: GAGGGAGGAGGGGCGGAGGCAGCAGGTCTTTGTTTG...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGAGGTTGGAGCATTATaGCAGGAACAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHEVGAL*QEQVFP
Trigger: AGGGAACACCTGTTCCTGGCATAATGCTCCAACCTC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGTCGCAACGCCTCCTCTaGGCCAGGGCCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMSQRLL*ARARAS
Trigger: AGAGGCCCTGGCCCTGGCGCAGAGGAGGCGTTGCGA...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCATCAATTTCCCCCACTaGAGTAAAGGGGCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPINFPH*SKGAKR
Trigger: CCTCTTCGCCCCTTTACTGCAGTGGGGGAAATTGAT...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGAAGTGAGTAGAGACTaGCAACATCAAAAGTCATGC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPEVSRD*QHQKSC
Trigger: GCATGACTTTTGATGTTGCCAGTCTCTACTCACTTC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTTTGCAACATTCTCCATaGGAACTATCAGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALLQHSP*ELSAPS
Trigger: AGAAGGGGCTGATAGTTCCCATGGAGAATGTTGCAA...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATCAAAGTGGACACAGTaGAACACCTCATTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWASKWTQ*NTSFAV
Trigger: CACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGCTGCTCTGCTGCTCTaGACACTCAAAGTGGACACA +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCAALLL*TLKVDT
Trigger: TGTGTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAGGAGACTTTAGTTCTGTCAGCAACCATGGTCCACTGTTGCTGGTTGGTAGAAGCTGACCGGCCAGGCTaGTGTCCCCTGTCCCCGATT +
Preference number: 4 (lower is better)
Translates to: QETLVLSATMVHCCWLVEADRPG*CPLSPI
Trigger: AATCGGGGACAGGGGACACCAGCCTGGCCGGTCAGC...TTCTACCAACCAGCAACAGTGGACCATGGTTGCTGACAGAACTAAAGTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp GTCCCAACGATACGGATGAAGGAGGCAGGCTGCCTTTCAAAAGTTACTGACTGCATTGGTGCTGCCGGTTaGGGGAGCGTGAGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: VPTIRMKEAGCLSKVTDCIGAAG*GSVSWS
Trigger: GCTCCAACTCACGCTCCCCCAACCGGCAGCACCAAT...GCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGCTTGTGTGCATTTGTaGCACTTCCTCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQACVHL*HFLCGP
Trigger: TGGGCCACAGAGGAAGTGCCACAAATGCACACAAGC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGAGTCCCCGGCAGGTTTaGCCACGCCAGAACTCGGTA +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQSPRQV*PRQNSV
Trigger: TACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACT...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGAGGGGGAGGCGAGCTaGCAGCGCGGCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSEGEAS*QRGCEG
Trigger: TCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTC...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGGGGCTGAGGGCTCTGTaGTGCCCAGGAGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMGLRAL*CPGALP
Trigger: TGGGAGGGCTCCTGGGCACCACAGAGCCCTCAGCCC...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTGCCCTGCTGGGTGCTaGCTGCATGGACACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSCPAGC*LHGHSC
Trigger: GCAGCTGTGTCCATGCAGCCAGCACCCAGCAGGGCA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGAAGGTGAAGTTGACTaGGCTGGAGCCATCTGCACA +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCEGEVD*AGAICT
Trigger: TGTGCAGATGGCTCCAGCCCAGTCAACTTCACCTTC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTGCAGCAGACTGGCCTaGGAGATGCCAGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSCSRLA*EMPGCW
Trigger: CCAGCACCCTGGCATCTCCCAGGCCAGTCTGCTGCA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGGGCGCACCAAGGCCTaGAGAGCCTTGGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFGRTKA*RALGRD
Trigger: ATCTCTCCCCAAGGCTCTCCAGGCCTTGGTGCGCCC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTTTCCCAACCCAGGCCTaGCATGGTCCCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFFPTQA*HGPCPC
Trigger: GCAAGGGCAGGGACCATGCCAGGCCTGGGTTGGGAA...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 72 bp GGATCCGTGTCAGCGAGAGAGATGGGGGCATTCCAGTaGTCCTGCATGCCATTTAAACCTTGCCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GSVSAREMGAFQ*SCMPFKPCPSL
Trigger: GAGGGAAGGGCAAGGTTTAAATGGCATGCAGGACAACTGGAATGCCCCCATCTCTCTCGCTGACACGGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCATCCCCAATCCTGTATaGTCCATGGTATTTATTTGG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPIPNPV*SMVFIW
Trigger: CCAAATAAATACCATGGATCATACAGGATTGGGGAT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314100.10
CDS-3UTR TCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCCCATTGACACTTCAATaGAGTATGAGTAAGACCGGC +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSPLTLQ*SMSKTG
Trigger: GCCGGTCTTACTCATACTTCATTGAAGTGTCAATGG...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAATGATCTATCACTCTaGCCCAATCAAGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPNDLSL*PNQVHP
Trigger: TGGATGAACTTGATTGGGTCAGAGTGATAGATCATT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATTACGGTTGTGCCAACTaGACCACAATCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNYGCAN*TTIAPL
Trigger: AAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTA...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCCTTTCAAAAGTTACTaGCTGCCAGGACTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHPFKSY*LPGLAG
Trigger: TCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGGCTTTCTCCTCCGCCTaGGTGTTTGCGTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTAFSSA*VFACHF
Trigger: AAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGC...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCTGTATTCCAGCAGAATaGACACTCTATGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPCIPAE*TLYGGP
Trigger: TGGGCCTCCATAGAGTGTTCATTCTGCTGGAATACA...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCACTCAGCCACACGAGTaGCTATTAACTCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEITQPHE*LLTPVS
Trigger: GGACACTGGAGTTAATAGTCACTCGTGTGGCTGAGT...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGATCCATGTCAGGAATaGCAGGTGAGTAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIDPCQE*QVSNSA
Trigger: GGCTGAGTTACTCACCTGTCATTCCTGACATGGATC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTGGACTTCGGAACAGTaGATTAGCAGCGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIWTSEQ*ISSGHS
Trigger: ACTATGCCCGCTGCTAATTCACTGTTCCGAAGTCCA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTTGGACTTCGGAACAGTaGATTAGCAGCGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPWTSEQ*ISSGHS
Trigger: ACTATGCCCGCTGCTAATTCACTGTTCCGAAGTCCA...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGCCCTCACCCTCCTTTaGTCAGGGTTGCAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFALTLL*SGLQVG
Trigger: GCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCTTTAATCACGCAGTTTaGTGCTACCCTACTATTTCC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPFNHAV*CYPTIS
Trigger: GGAAATAGTAGGGTAGCATCAAACTGCGTGATTAAA...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGCCCCGGTAGCCCTCTaGTGTCTGCCATCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFAPVAL*CLPSCV
Trigger: AACACAGGATGGCAGACATCAGAGGGCTACCGGGGC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAGGCAGAGATCAGAGCTaGGGGGATAGGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKGRDQS*GDRKQL
Trigger: GAGCTGCTTCCTATCCCCTCAGCTCTGATCTCTGCC...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGACTCTGCCCTTGATATaGCTGTCTGGCTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQTLPLI*LSGSFV
Trigger: GACAAAGGAGCCAGACAGTCATATCAAGGGCAGAGT...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCGGGCCTCTGGGCAGGTaGTGCCCATGTTTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFGPLGR*CPCLKR
Trigger: TCTTTTTAAACATGGGCATCACCTGCCCAGAGGCCC...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTTTCCATTGGTTACTaGGGACCATTGCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNLSIGY*GPLPSW
Trigger: CCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAG...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGGGTTGCTCTGCAAAATaGGGAAGAAGCCGCATCGTG +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTGCSAK*GRSRIV
Trigger: CACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACC...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTTTTCCACCACGAATGTaGCGTCGCCATATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCFPPRM*RRHILP
Trigger: GGGAAGAATATGGCGACGTCACATTCGTGGTGGAAA...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTTTCCACCACGAATGTaGCGTCGCCATATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIFPPRM*RRHILP
Trigger: GGGAAGAATATGGCGACGTCACATTCGTGGTGGAAA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCCCAGCGATGCTCCTCTaGGACCAAGCTGCGACACAG +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSPAMLL*DQAATQ
Trigger: CTGTGTCGCAGCTTGGTCTCAGAGGAGCATCGCTGG...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAATTGCCTTATCTGCTaGTTTTCAGCAAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPNCLIC*FSANQG
Trigger: ACCTTGGTTTGCTGAAAATCAGCAGATAAGGCAATT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTCATCTGTCAGCGTTaGCCGCCCAGTGTAGATATA +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNLICQR*PPSVDI
Trigger: TATATCTACACTGGGCGGGCAACGCTGACAGATGAG...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGTTCTGGCTGCTCTGCTaGTCTGGACACTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTFWLLC*SGHSKW
Trigger: CCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAA...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGTCCTTCTGGCTGCTCTaGTGCTCTGGACACTCAAAG +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTSFWLL*CSGHSK
Trigger: CTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGA...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCTCCTTCTGGCTGCTCTaGTGCTCTGGACACTCAAAG +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCSFWLL*CSGHSK
Trigger: CTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGA...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCATCACACCAGGCCCGCTaGCTCCTTTATTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPSHQAR*LLYWCC
Trigger: GCAGCACCAATAAAGGAGGCAGCGGGCCTGGTGTGA...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGTTGATTTGCTTGTGTaGATTTGTGGCACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALVDLLV*ICGTSS
Trigger: AGAGGAAGTGCCACAAATGCACACAAGCAAATCAAC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCAAAGCTTCTTGGAACTaGTATTTTTCAGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPKASWN*YFSVPS
Trigger: ACTGGGGACTGAAAAATAGCAGTTCCAAGAAGCTTT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTAGGAAGTGCTGTGTGTaGAGGAGCTCTCTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPRKCCV*RSSLAN
Trigger: ATTAGCCAGAGAGCTCCTGCACACACAGCACTTCCT...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGAGGAAGTGCTGTGTGTaGAGGAGCTCTCTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQRKCCV*RSSLAN
Trigger: ATTAGCCAGAGAGCTCCTGCACACACAGCACTTCCT...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAAGGTCAGCAGCATGCTaGTTCAGGCCAAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKRSAAC*FRPRAS
Trigger: AGAGGCCCTTGGCCTGAAGCAGCATGCTGCTGACCT...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAGATGCGAGGCCGAGCTaGCAAGCTGCTATCTCGTTC +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKDARPS*QAAISF
Trigger: GAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATC...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCACCTCCCATTTCTTTaGCTGGGTGGTGGTGACCAT +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTHLPFL*LGGGDH
Trigger: ATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCACCTCCCATTTCTTTaGCTGGGTGGTGGTGACCAT +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCHLPFL*LGGGDH
Trigger: ATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCATTGGGGCCAGCACTGTaGAAAGGATGGGTGAGCACG +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPLGPAL*KGWVST
Trigger: CGTGCTCACCCATCCTTTGCACAGTGCTGGCCCCAA...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGAAGAAGCCGCATCGTaGTCACAAATAATACACATT +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPEEAAS*SQIIHI
Trigger: AATGTGTATTATTTGTGAGCACGATGCGGCTTCTTC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCACGGTTTGTACATCTaGCCGCTTAGGTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTHGLYI*PLRLLC
Trigger: GCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGTGCAATGTTTTCTTCTaGTATGAGCATGCCTCTATA +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAECNVFF*YEHASI
Trigger: TATAGAGGCATGCTCATACCAGAAGAAAACATTGCA...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTTCTGTCAGCAACCATaGTCCACTGTTGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIFCQQP*STVAGW
Trigger: CCAACCAGCAACAGTGGACCATGGTTGCTGACAGAA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATTTCTGTCAGCAACCATaGTCCACTGTTGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNFCQQP*STVAGW
Trigger: CCAACCAGCAACAGTGGACCATGGTTGCTGACAGAA...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTAACCGTATTGACCCAATCATGTACGGTTGTGCCAACTGAACCACAATCGCACTGGGGGAGCGTGAGTTaGAGCCTGGGCTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: VTVLTQSCTVVPTEPQSHWGSVS*SLGWRV
Trigger: TACCCTCCAGCCCAGGCTCCAACTCACGCTCCCCCA...GTGCGATTGTGGTTCAGTTGGCACAACCGTACATGATTGGGTCAATACGGTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTCGCTGCCTCCTTTATTaGTGCTGCCGGTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFRCLLY*CCRLGE
Trigger: CTCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCG...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAAAGCGGCTGACCCGTTaGCTCTTTCTAGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKKRLTR*LFLERS
Trigger: GCTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTT...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCGGAGGGACAGAGATCTaGAAGGGCATGCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSGGTEI*KGMPRR
Trigger: CCTTCGGGGCATGCCCTTCCAGATCTCTGTCCCTCC...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGAACCCGTGTCCTTTTaGAGTCCAGGGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFEPVSF*SPGQAP
Trigger: GGGAGCCTGCCCTGGACTCCAAAAGGACACGGGTTC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAGGAGCGACTGTCCACTaGCTTTCAAAGGCGGCACTC +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPGATVH*LSKAAL
Trigger: GAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCC...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCACCCTCGCCTTCCTaGGACATAAACCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPAPSPS*DINPWG
Trigger: GCCCCAGGGGTTTATGTCCCAGGAAGGCGAGGGTGC...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCCCCAGGTGGGAAGTGTaGGCTGGGGGTAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPPRWEV*AGGKPS
Trigger: GCTGGGTTTACCCCCAGCCCACACTTCCCACCTGGG...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCCAGGCCCCACAGACCTaGAAGCTCTGCCCCAGTATC +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSQAPQT*KLCPSI
Trigger: GATACTGGGGCAGAGCTTCCAGGTCTGTGGGGCCTG...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGAATGCTCGAAAATATTaGCACCTGGCTGCTAAAATT +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAENARKY*HLAAKI
Trigger: AATTTTAGCAGCCAGGTGCCAATATTTTCGAGCATT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
3UTR CAA 72 bp CATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTaGTGTCCTTTCCATTGGTTACTGAGGACCATTGCC +
Preference number: 4 (lower is better)
Translates to: HFFAWVVVTMAP*CPFHWLLRTIA
Trigger: GGCAATGGTCCTCAGTAACCAATGGAAAGGACACAAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGGAAATCCATATTTATaGGCCAGGCTCAAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSGNPYL*ARLKKS
Trigger: GGACTTTTTGAGCCTGGCTCATAAATATGGATTTCC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTTCCCAACGATACGGATaGAGGAGGCAGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRASQRYG*RRQAAF
Trigger: AAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGA...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCCATTTTCTCCCCCTTaGGACCTGCCTGATTTGGAT +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCPFSPP*DLPDLD
Trigger: ATCCAAATCAGGCAGGTCTCAAGGGGGAGAAAATGG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTTGTATTCCAGCAGAATaGACACTCTATGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCCIPAE*TLYGGP
Trigger: TGGGCCTCCATAGAGTGTTCATTCTGCTGGAATACA...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGCCACCATCGTCAAATaGGGTCCTTTTGATGAGGAT +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNATIVK*GPFDED
Trigger: ATCCTCATCAAAAGGACCTCATTTGACGATGGTGGC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCCCCGGTAGCCCTCTaGTGTCTGCCATCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPAPVAL*CLPSCV
Trigger: AACACAGGATGGCAGACATCAGAGGGCTACCGGGGC...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCAAGAAGACACGAAGCTaGTGGGGCAGGAGGGCCGTT +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSKKTRS*WGRRAV
Trigger: AACGGCCCTCCTGCCCCATCAGCTTCGTGTCTTCTT...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTTGCCTCCTTTATTGGTaGTGCCGGTTGGGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFCLLYW*CRLGER
Trigger: ACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCA...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTCACACCAGGCCCGCTaGCTCCTTTATTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSSHQAR*LLYWCC
Trigger: GCAGCACCAATAAAGGAGGCAGCGGGCCTGGTGTGA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTCCGCCTGAGTGTTTaGGTGCCATTTTTGTATTCC +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNLRLSV*VPFLYS
Trigger: GGAATACAAAAATGGCACGCAAACACTCAGGCGGAG...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCAGTGCCAGGATGAGCTaGATCCGTGTCTCATTTAGG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFSARMS*IRVSFR
Trigger: CCTAAATGAGACACGGATGCAGCTCATCCTGGCACT...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGAGGGAATGAGACTTTaGCATCAGTCCTCACCAATG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIEGMRL*HQSSPM
Trigger: CATTGGTGAGGACTGATGGCAAAGTCTCATTCCCTC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTCCTGTCAGCCTCACCTaGCACCTCTCTCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFPVSLT*HLSPCW
Trigger: CCAACATGGAGAGAGGTGGCAGGTGAGGCTGACAGG...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATAAAACAAATGGAGTATaGCCACCTCTGCCACGGCAT +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNKTNGV*PPLPRH
Trigger: ATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTT...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAATCAATGGCTGCAGCTaGCAAAACAAATGGAGTATG +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGINGCS*QNKWSM
Trigger: CATACTCCATTTGTTTTGGCAGCTGCAGCCATTGAT...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGGGCGGCTCTTCCATaGACCTGTCCCCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSGAALP*TCPLPL
Trigger: CAGAGGCAGGGGACAGGTGCATGGAAGAGCCGCCCC...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGACGCAAATGGTAAATaGTCCCAGACATTTATCATA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPDANGK*SQTFII
Trigger: TATGATAAATGTCTGGGAGCATTTACCATTTGCGTC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTCCTCTGAGACCAAGCTaGGACACAGACGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFPLRPS*DTDASS
Trigger: GGAAGAGGCGTCTGTGTCGCAGCTTGGTCTCAGAGG...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCAGCAAACCAAGGTTTaGTCTCTTGGGCTCATGAGG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFQQTKV*SLGLMR
Trigger: CCTCATGAGCCCAAGAGAGCAAACCTTGGTTTGCTG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCATGGTCCACTGTTGCTaGTTGGTAGAAACCTCAACG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIMVHCC*LVETST
Trigger: CGTTGAGGTTTCTACCAACCAGCAACAGTGGACCAT...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GACACAGTGGAACACCTCATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAAAGTTGGAGCCTGGGCTaGAGGGTAGTGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: DTVEHLICCVVCPNDTDESWSLG*RVVSCH
Trigger: GTGGCAGCTCACTACCCTCCAGCCCAGGCTCCAACT...TTCATCCGTATCGTTGGGACACACAACACAGCAAATGAGGTGTTCCACTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCATTGGTGCTGCCGGTTaGGGGAGCGTGAGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPIGAAG*GSVSWS
Trigger: GCTCCAACTCACGCTCCCCCAACCGGCAGCACCAAT...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CACTGGCACAATCAGCAATTGTTGCAACATTCTCCATGGGAACTATCAGCCCCTCGCTGCCTCCTTTATTaGTGCTGCCGGTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: HWHNQQLLQHSPWELSAPRCLLY*CCRLGE
Trigger: CTCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCG...AGGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCAAGCGGCTGACCCGTTaGCTCTTTCTAGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSKRLTR*LFLERS
Trigger: GCTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTT...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGAGAGCTGCAGACCCTaGCTTCTCCTCAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFESCRP*LLLRNV
Trigger: CACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGAGCTACCGGGGAGGATaGAGAGCTGCAGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMSYRGG*RAADPG
Trigger: GCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCT...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGCTCAGCCCTGCAGCTaGAGCTACCGGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSAQPCS*SYRGGW
Trigger: CCATCCTCCCCGGTAGCTCCAGCTGCAGGGCTGAGC...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGAGCTCTCTGGCTAATTaGCAACCCGGGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMSSLAN*QPGAGG
Trigger: GCCCCCAGCCCCGGGTTGCCAATTAGCCAGAGAGCT...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTTGTGCAGGAGCTCTCTaGCTAATTGGCAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFCAGAL*LIGNPG
Trigger: CCCCGGGTTGCCAATTAGCCAGAGAGCTCCTGCACA...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCTCCTTTGTCCCCATCTaGGTAGAAAACACACTGGGG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFSFVPI*VENTLG
Trigger: CCCCAGTGTGTTTTCTACCCAGATGGGGACAAAGGA...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGCTTGATATGACTGTCTaGCTCCTTTGTCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQLDMTV*LLCPHL
Trigger: CAGATGGGGACAAAGGAGCCAGACAGTCATATCAAG...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTGGGCTGGCCTGGGCATaGGGGAGCTTATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASGLAWA*GSLSPR
Trigger: TCGGGGAGATAAGCTCCCCCATGCCCAGGCCAGCCC...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAATCCCATTTCTTTGCCTaGGTGGTGGTGACCATGGCG +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKSHFFA*VVVTMA
Trigger: CGCCATGGTCACCACCACCCAGGCAAAGAAATGGGA...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCATCCCATTTCTTTGCCTaGGTGGTGGTGACCATGGCG +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPSHFFA*VVVTMA
Trigger: CGCCATGGTCACCACCACCCAGGCAAAGAAATGGGA...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGAAGGGTGGGGGTGCTaGCCACCTCCCATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFEGWGC*PPPISL
Trigger: CAAAGAAATGGGAGGTGGCCAGCACCCCCACCCTTC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGAAAAGTGAAGGGTaGGGGTGCTGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSMKSEG*GCWPPP
Trigger: GGGAGGTGGCCAGCACCCCCACCCTTCACTTTTCAT...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAAGCCCCAGGTATGACTaGATCCGTGTCAGCGAGAGA +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPSPRYD*IRVSER
Trigger: TCTCTCGCTGACACGGATCCAGTCATACCTGGGGCT...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGGACCCCTGGCCTCCTaGCGCCCCTCCAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFGPLAS*RPSRVS
Trigger: TGAGACTCTGGAGGGGCGCCAGGAGGCCAGGGGTCC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATTGCATCAGAGTGGCCTaGGAGGTACACACATCTTTA +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNCIRVA*EVHTSL
Trigger: TAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCA...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCTTTAGACGGAGCTTCTaGAGTCACAGAGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCFRRSF*SHRAIP
Trigger: GGGAATGGCTCTGTGACTCCAGAAGCTCCGTCTAAA...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 72 bp TTTACAGGCCCAGAAACGCCAAAGGCTGGGAGGCTCTaGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: FTGPETPKAGRL*FSGESGFKTGF
Trigger: GAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCCCAGCCTTTGGCGTTTCTGGGCCTGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAACATTTCGGCTCCGACTaGCTCCTTCAATCACACTGG +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKHFGSD*LLQSHW
Trigger: CCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAATG...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGATCCGGAACACCTATaGTTCACTGAGTGGAGAATA +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQDPEHL*FTEWRI
Trigger: TATTCTCCACTCAGTGAATCATAGGTGTTCCGGATC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGCCTGTTCCCTGGAGATaGGGTCCTTGCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMPVPWR*GPCPGV
Trigger: CACACCAGGGCAAGGACCTCATCTCCAGGGAACAGG...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCCCCAAAAGCTCCAATaGAGTTGCCTTTCTACTCTC +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTPQKLQ*SCLSTL
Trigger: GAGAGTAGAAAGGCAACTTCATTGGAGCTTTTGGGG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAACATTCACTCTGCAAATaGCCAGGGCCTCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKHSLCK*PGPPNP
Trigger: GGGATTTGGAGGCCCTGGTCATTTGCAGAGTGAATG...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGGCCAGGGAGCACCGTaGCCAGTGGTGGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFGQGAP*PVVVTE
Trigger: CTCTGTGACCACCACTGGTCACGGTGCTCCCTGGCC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGGTTCAGCCTGGCTTCTaGCTGGAAGCTCGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMVQPGF*LEARWV
Trigger: CACCCAGCGAGCTTCCAGTCAGAAGCCAGGCTGAAC...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGTTGGAGAGGAATTTCTaGTTCAGGCTGAGACTCTCG +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTLERNF*FRLRLS
Trigger: CGAGAGTCTCAGCCTGAAGCAGAAATTCCTCTCCAA...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTATGAAGGAGGCAGGCTaGCTTTCAAAAGTTACTGAC +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCMKEAG*LSKVTD
Trigger: GTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCAT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CACTGGCACAATCAGCAATTGTTGCAACATTCTCCATGGGAACTATCAGCCCCTTGCCTCCTTTATTGGTaGTGCCGGTTGGGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: HWHNQQLLQHSPWELSAPCLLYW*CRLGER
Trigger: ACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCA...AGGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp GCATTTCGGCTCCGACTGACTCCTTCAATCACACTGGCACAATCAGCAATTGTTTCACACCAGGCCCGCTaGCTCCTTTATTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: AFRLRLTPSITLAQSAIVSHQAR*LLYWCC
Trigger: GCAGCACCAATAAAGGAGGCAGCGGGCCTGGTGTGA...AACAATTGCTGATTGTGCCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAAAAGCTTCTTGGAACTaGTATTTTTCAGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSKASWN*YFSVPS
Trigger: ACTGGGGACTGAAAAATAGCAGTTCCAAGAAGCTTT...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGGGGCAGGCAATGTTGTaGGCAGTTACCCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMGQAML*AVTQGR
Trigger: CCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGCAAGGACTGCAGTGCTaGTCACGTGCCATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMQGLQC*SRAMPS
Trigger: GGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTG...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAACGTGTCCACCCTaGCCCGGTAGCCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSGTCPP*PGSPLM
Trigger: CATCAGAGGGCTACCGGGGCAGGGTGGACACGTTCC...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGCCAAGGTCAGCAGCATaGTGCTTCAGGCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMPRSAA*CFRPRA
Trigger: GGCCCTTGGCCTGAAGCAGCATGCTGCTGACCTTGG...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCATGGAAGCTCGCTGGGTaGAGCAGACTGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSWKLAG*SRLAWE
Trigger: CTCCCAGGCCAGTCTGCTGCACCCAGCGAGCTTCCA...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAAGGAGGCAGGCTGCCTTTCGCTGCTCTGCTGCTCTaGACACTCAAAGTGGACACA +
Preference number: 4 (lower is better)
Translates to: ICCVVCPNDTDEGGRLPFAALLL*TLKVDT
Trigger: TGTGTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGC...GAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGACACACAACACAGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCACGTGCCATGCCGTCCTaGGGAGACTCCCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSRAMPS*GDSQAD
Trigger: ATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACG...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCTTGATATGACTGTCTaGCTCCTTTGTCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTLDMTV*LLCPHL
Trigger: CAGATGGGGACAAAGGAGCCAGACAGTCATATCAAG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGTCCCACATCCATCATaGCTTGTGCTTCTAACTAAA +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHVPHPS*LVLLTK
Trigger: TTTAGTTAGAAGCACAAGCCATGATGGATGTGGGAC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAACAGCAGTTTGACAACTaGGGCGACAGCATAATACTG +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEQQFDN*GDSIIL
Trigger: CAGTATTATGCTGTCGCCCCAGTTGTCAAACTGCTG...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTCCCAGGTGGGAAGTGTaGGCTGGGGGTAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASPRWEV*AGGKPS
Trigger: GCTGGGTTTACCCCCAGCCCACACTTCCCACCTGGG...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGCATTTTCACACACATaGACTCAGGGGTTTCGAACA +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIAFSHT*TQGFRT
Trigger: TGTTCGAAACCCCTGAGTCCATGTGTGTGAAAATGC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGTCATGCAGACATTCTaGATGTTAAGTATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQVMQTF*MLSMVQ
Trigger: CTGCACCATACTTAACATTCAGAATGTCTGCATGAC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGTCATGCAGACATTCTaGATGTTAAGTATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIVMQTF*MLSMVQ
Trigger: CTGCACCATACTTAACATTCAGAATGTCTGCATGAC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp TCATGTACGGTTGTGCCAACTGAACCACAATCGCACCACTTCCTAGCTGGTGACGCATGCCTCTATAATTaGGGTCCATATCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SCTVVPTEPQSHHFLAGDACLYN*GPYPGS
Trigger: AGAGCCGGGATATGGACCTCAATTATAGAGGCATGC...GTCACCAGCTAGGAAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCACTTCAATGAAGTATaGGTAAGACCGGCTATCTCG +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCHFNEV*VRPAIS
Trigger: CGAGATAGCCGGTCTTACTCATACTTCATTGAAGTG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ATTCTTAGTGTCCCCATTCAGCAAGGCATTTCGGCTCCGACTGACTCCTTCAATTCCCAACGATACGGATaGAGGAGGCAGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ILSVPIQQGISAPTDSFNSQRYG*RRQAAF
Trigger: AAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGA...ATTGAAGGAGTCAGTCGGAGCCGAAATGCCTTGCTGAATGGGGACACTAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCGCTTTCTCCTCCGCCTaGGTGTTTGCGTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSAFSSA*VFACHF
Trigger: AAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGC...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTCTGTCCCCGCAAGCTaGACCGTTCAAAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSSVPAS*TVQNQG
Trigger: TCCTTGGTTTTGAACGGTTCAGCTTGCGGGGACAGA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGCCCTGGTGTGTGGTGTaGCACACCTTGACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMPWCVV*HTLTWP
Trigger: AGGCCAAGTCAAGGTGTGTCACACCACACACCAGGG...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCACTTTCCATTGGTTACTaGGGACCATTGCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPLSIGY*GPLPSW
Trigger: CCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAG...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGCTCTTGTTCTCTGGTaGATCCGGATTCAAGACAGG +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAALVLW*IRIQDR
Trigger: CCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCAATCATGTACGGTTGTaGCAACTGAACCACAATCGC +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCNHVRL*QLNHNR
Trigger: GCGATTGTGGTTCAGTTGGCACAACCGTACATGATT...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCAATCATGTACGGTTGTaGCAACTGAACCACAATCGC +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFNHVRL*QLNHNR
Trigger: GCGATTGTGGTTCAGTTGGCACAACCGTACATGATT...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTCCTCTGTGGCCCAAGTaGCAGGATGAGCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASPLWPK*QDELHP
Trigger: CGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGG...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCACCTCTGTGGCCCAAGTaGCAGGATGAGCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSPLWPK*QDELHP
Trigger: CGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGG...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAACCCAAGGACTGCAGTaGTGCTCACGTGCCATGCCG +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSTQGLQ*CSRAMP
Trigger: CGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGT...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCAGATCTGGAAGGGCATaGCCCGAAGGAAAGAACCGC +
Preference number: 4 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPRSGRA*PEGKNR
Trigger: GCGGTTCTTTCCTTCGGGGCATGCCCTTCCAGATCT...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGGTTACTGAGGACCATTaGCCTCATGGGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMVTEDH*PHGPRP
Trigger: TGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAAC...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGAGTATGCCCACCTCTaGCACGGCATCGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSEYAHL*HGIAAD
Trigger: GTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTC...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTCAGACCTGGAAGCTCTaGCCCAGTATCCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASQTWKL*PSIPQP
Trigger: AGGCTGGGGGATACTGGGGCAGAGCTTCCAGGTCTG...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCTTGCAACATTCTCCATaGGAACTATCAGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFLQHSP*ELSAPS
Trigger: AGAAGGGGCTGATAGTTCCCATGGAGAATGTTGCAA...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCTTGCAACATTCTCCATaGGAACTATCAGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCLQHSP*ELSAPS
Trigger: AGAAGGGGCTGATAGTTCCCATGGAGAATGTTGCAA...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCGCTGCTCTGCTGCTCTaGACACTCAAAGTGGACACA +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSAALLL*TLKVDT
Trigger: TGTGTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGC...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGAGGAGACATGCACGATaGGTCTCTGTCCCCGCAAGC +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMRRHAR*VSVPAS
Trigger: GCTTGCGGGGACAGAGACCCATCGTGCATGTCTCCT...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGAAGCGGCTGACCCGTTaGCTCTTTCTAGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMKRLTR*LFLERS
Trigger: GCTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTT...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTAGGTCGCTTTGGTCCTaGTGGCCCAGGGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASRSLWS*WPRGEV
Trigger: CACTTCTCCCCTGGGCCACCAGGACCAAAGCGACCT...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTTGTCAGCGAGAGAGATaGGGGCATTCCAGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFCQRER*GHSSCP
Trigger: AGGACAACTGGAATGCCCCCATCTCTCTCGCTGACA...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCGTGATTTTCAAACAATaGTGTGTCGGGTGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSVIFKQ*CVGWGG
Trigger: GCCGCCCCACCCGACACACCATTGTTTGAAAATCAC...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGAGGGCCGTTCAGCCTaGCTTCTGACTGGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSEGRSA*LLTGSS
Trigger: CGAGCTTCCAGTCAGAAGCCAGGCTGAACGGCCCTC...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCTTCCCAACCCAGGCCTaGCATGGTCCCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFFPTQA*HGPCPC
Trigger: GCAAGGGCAGGGACCATGCCAGGCCTGGGTTGGGAA...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 72 bp GGCTTTCTCCTCCGCCTGAGTGTTTGCGTGCCATTTTaGTATTCCAACACAGGCCTGTCTATGACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GFLLRLSVCVPF*YSNTGLSMTSS
Trigger: GGAGGAAGTCATAGACAGGCCTGTGTTGGAATACAAAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGGAAATCCATATTTATaGGCCAGGCTCAAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCGNPYL*ARLKKS
Trigger: GGACTTTTTGAGCCTGGCTCATAAATATGGATTTCC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTTACGGTTGTGCCAACTaGACCACAATCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFYGCAN*TTIAPL
Trigger: AAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTA...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCACCTTTCAAAAGTTACTaGCTGCCAGGACTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPPFKSY*LPGLAG
Trigger: TCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGG...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTCCCAACGATACGGATGAAGGAGGCAGGCTGCCTTTCAAAAGTTACTGACTGCCCTTTCAAAAGTTACTaGCTGCCAGGACTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: VPTIRMKEAGCLSKVTDCPFKSY*LPGLAG
Trigger: TCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGG...GCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCCCATTTTCTCCCCCTTaGGACCTGCCTGATTTGGAT +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSPFSPP*DLPDLD
Trigger: ATCCAAATCAGGCAGGTCTCAAGGGGGAGAAAATGG...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTGCCCAAGTGCCAGGATaGGCTGCATCCGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASAQVPG*AASVSH
Trigger: ATGAGACACGGATGCAGCTCATCCTGGCACTTGGGC...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTTTTAATCACGCAGTTTaGTGCTACCCTACTATTTCC +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPFNHAV*CYPTIS
Trigger: GGAAATAGTAGGGTAGCATCAAACTGCGTGATTAAA...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTAATAATAATGAAAAGTaGAGGGTGGGGGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRANNNEK*RVGVLA
Trigger: GGCCAGCACCCCCACCCTTCACTTTTCATTATTATT...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCTGTGCAAAGGATGGGTaGGCACGCTGTCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFCAKDG*ARCPSE
Trigger: CTCCGAGGGACAGCGTGCTCACCCATCCTTTGCACA...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGCTCTTGTTCTCTGGTaGATCCGGATTCAAGACAGG +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFALVLW*IRIQDR
Trigger: CCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTCTCATCTGTCAGCGTTaGCCGCCCAGTGTAGATATA +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFLICQR*PPSVDI
Trigger: TATATCTACACTGGGCGGGCAACGCTGACAGATGAG...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCAATTCGAATATACCTaGAGACACGGGCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCQFEYT*RHGLEN
Trigger: ATTTTCCAGCCCGTGTCTGCAGGTATATTCGAATTG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCAATTCGAATATACCTaGAGACACGGGCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFQFEYT*RHGLEN
Trigger: ATTTTCCAGCCCGTGTCTGCAGGTATATTCGAATTG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAACCATGGTCCACTGTTaGTGGTTGGTAGAAACCTCA +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKTMVHC*WLVETS
Trigger: TGAGGTTTCTACCAACCAGCAACAGTGGACCATGGT...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTTGCCTCCTTTATTGGTaGTGCCGGTTGGGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASCLLYW*CRLGER
Trigger: ACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCA...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTCTCCGCCTGAGTGTTTaGGTGCCATTTTTGTATTCC +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRALRLSV*VPFLYS
Trigger: GGAATACAAAAATGGCACGCAAACACTCAGGCGGAG...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTACGGAGTCCCAGTTCTaGGTTCCTGACGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASTESQF*VPDADG
Trigger: CCCATCAGCGTCAGGAACGCAGAACTGGGACTCCGT...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCCCTCCCATTATGAAATaGCTGGCATCCCAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSPPIMK*LASQEC
Trigger: ACACTCCTGGGATGCCAGGCATTTCATAATGGGAGG...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCACCTGTCAGCCTCACCTaGCACCTCTCTCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSPVSLT*HLSPCW
Trigger: CCAACATGGAGAGAGGTGGCAGGTGAGGCTGACAGG...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGAAGAAGCCGCATCGTaGTCACAAATAATACACATT +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIEEAAS*SQIIHI
Trigger: AATGTGTATTATTTGTGAGCACGATGCGGCTTCTTC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGAAGTGAGTAGAGACTaGCAACATCAAAAGTCATGC +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEEVSRD*QHQKSC
Trigger: GCATGACTTTTGATGTTGCCAGTCTCTACTCACTTC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp TCACTATTTTCCTCCTTCTGGCTGCTCTGCTGCTCTGGACACTCAAAGTGGACATTCTGTCAGCAACCATaGTCCACTGTTGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SLFSSFWLLCCSGHSKWTFCQQP*STVAGW
Trigger: CCAACCAGCAACAGTGGACCATGGTTGCTGACAGAA...TGTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAAATAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTCCTTTGTCCCCATCTaGGTAGAAAACACACTGGGG +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSSFVPI*VENTLG
Trigger: CCCCAGTGTGTTTTCTACCCAGATGGGGACAAAGGA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCACTTGATATGACTGTCTaGCTCCTTTGTCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPLDMTV*LLCPHL
Trigger: CAGATGGGGACAAAGGAGCCAGACAGTCATATCAAG...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGTGTTTAGGTCGCTTTaGTCCTGGTGGCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSVFRSL*SWWPRG
Trigger: TCCCCTGGGCCACCAGGACCAAAGCGACCTAAACAC...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCGTCCCACATCCATCATaGCTTGTGCTTCTAACTAAA +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFVPHPS*LVLLTK
Trigger: TTTAGTTAGAAGCACAAGCCATGATGGATGTGGGAC...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGCACTGTGCAAAGGATaGGTGAGCACGCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSALCKG*VSTLSL
Trigger: GAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGC...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCAGCCTGGCTTCTGACTaGAAGCTCGCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFSLASD*KLAGCS
Trigger: GCTGCACCCAGCGAGCTTCCAGTCAGAAGCCAGGCT...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCCCAATTCCGCTCAGATaGGCACCCTCGCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFPIPLR*APSPSW
Trigger: CCAGGAAGGCGAGGGTGCCCATCTGAGCGGAATTGG...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTCTGAGGGAGATGAGCTaGTGCCGTCCCCTCCCAATT +
Preference number: 4 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASLREMS*CRPLPI
Trigger: AATTGGGAGGGGACGGCACCAGCTCATCTCCCTCAG...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCACAAGGTTTGCTCTCTTaGGCTCATGAGGCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPQGLLS*AHEAVE
Trigger: TTCTACAGCCTCATGAGCCCAAGAGAGCAAACCTTG...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649492.1
3UTR CAA 72 bp TTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTaGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCT +
Preference number: 4 (lower is better)
Translates to: FRTHGLYICPLR*LCKMRKKPHRA
Trigger: AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 72 bp TCACACACATGGACTCAGGGGTTTCGAACACACGGTTaGTACATCTGCCCGCTTAGGTTGCTCTGCAAAATG +
Preference number: 4 (lower is better)
Translates to: SHTWTQGFRTHG*YICPLRLLCKM
Trigger: CATTTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCATTTCTGCTTCAGGCTaGGACTCTCGCATTCCACCA +
Preference number: 4 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPISASG*DSRIPP
Trigger: TGGTGGAATGCGAGAGTCTCAGCCTGAAGCAGAAAT...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCACCATTGACACTTCAATaGAGTATGAGTAAGACCGGC +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPPLTLQ*SMSKTG
Trigger: GCCGGTCTTACTCATACTTCATTGAAGTGTCAATGG...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCACAGATATTGTGAATaGTCTATCACTCTGACCCAA +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTHRYCE*SITLTQ
Trigger: TTGGGTCAGAGTGATAGATCATTCACAATATCTGTG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCACAGATATTGTGAATaGTCTATCACTCTGACCCAA +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCHRYCE*SITLTQ
Trigger: TTGGGTCAGAGTGATAGATCATTCACAATATCTGTG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCTTGTTCACTGTGTTGTaGGTCCCAACAATTCGAATA +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFLFTVL*VPTIRI
Trigger: TATTCGAATTGTTGGGACTCACAACACAGTGAACAA...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCTTGTTCACTGTGTTGTaGGTCCCAACAATTCGAATA +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCLFTVL*VPTIRI
Trigger: TATTCGAATTGTTGGGACTCACAACACAGTGAACAA...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACATGTGTAGCCAGAATCCCAGTCATAATTCTTAGTGTCCCCATTCAGCAAGGCCATTTCGGCTCCGACTaGCTCCTTCAATCACACTGG +
Preference number: 4 (lower is better)
Translates to: TCVARIPVIILSVPIQQGHFGSD*LLQSHW
Trigger: CCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAATG...GCCTTGCTGAATGGGGACACTAAGAATTATGACTGGGATTCTGGCTACACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGCATTTCGGCTCCGACTaGCTCCTTCAATCACACTGG +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMHFGSD*LLQSHW
Trigger: CCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAATG...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCGCCACCATCGTCAAATaGGGTCCTTTTGATGAGGAT +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSATIVK*GPFDED
Trigger: ATCCTCATCAAAAGGACCTCATTTGACGATGGTGGC...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCATTTCTAGAGCGCAGCTaGTATGTCTTTGACACACCT +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPFLERS*YVFDTP
Trigger: AGGTGTGTCAAAGACATATCAGCTGCGCTCTAGAAA...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTTTGAACTCTGCCCTTaGTATGACTGTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSFELCP*YDCLAP
Trigger: AGGAGCCAGACAGTCATATCAAGGGCAGAGTTCAAA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGATCAGTCCTCACCAATaGCATCTACTGTTAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQISPHQ*HLLLVP
Trigger: TGGCACTAACAGTAGATGTCATTGGTGAGGACTGAT...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAATCAGTCCTCACCAATaGCATCTACTGTTAGTGCCA +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPISPHQ*HLLLVP
Trigger: TGGCACTAACAGTAGATGTCATTGGTGAGGACTGAT...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCCCCTGGTGTGTGGTGTaGCACACCTTGACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFPWCVV*HTLTWP
Trigger: AGGCCAAGTCAAGGTGTGTCACACCACACACCAGGG...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTCCCCAAAAGCTCCAATaGAGTTGCCTTTCTACTCTC +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFPQKLQ*SCLSTL
Trigger: GAGAGTAGAAAGGCAACTTCATTGGAGCTTTTGGGG...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp TCATGTACGGTTGTGCCAACTGAACCACAATCGCACCACTTCCTAGCTGGTGACCACTGGGTTATACTCTaGCTAAAAGTACCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SCTVVPTEPQSHHFLAGDHWVIL*LKVPLK
Trigger: CTTCAGGGGTACTTTTAGGCAGAGTATAACCCAGTG...GTCACCAGCTAGGAAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp CAGGAGACTTTAGTTCTGTCAGCAACCATGGTCCACTGTTGCTGGTTGGTAGAACTCATCTGTCAGCGTTaGCCGCCCAGTGTAGATATA +
Preference number: 4 (lower is better)
Translates to: QETLVLSATMVHCCWLVELICQR*PPSVDI
Trigger: TATATCTACACTGGGCGGGCAACGCTGACAGATGAG...TTCTACCAACCAGCAACAGTGGACCATGGTTGCTGACAGAACTAAAGTCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp ATTCAGCAAGGCATTTCGGCTCCGACTGACTCCTTCAATCACACTGGCACAATCACCATGGTCCACTGTTaGTGGTTGGTAGAAACCTCA +
Preference number: 4 (lower is better)
Translates to: IQQGISAPTDSFNHTGTITMVHC*WLVETS
Trigger: TGAGGTTTCTACCAACCAGCAACAGTGGACCATGGT...GATTGTGCCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAATGCCTTGCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp ATGAAGGAGGCAGGCTGCCTTTCAAAAGTTACTGACTGCCAGGACTTGCAGGAGTCAAAAGTTACTGACTaGCAGGACTTGCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: MKEAGCLSKVTDCQDLQESKVTD*QDLQET
Trigger: AGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGA...CTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAAGGAGGCAGGCTaGCTTTCAAAAGTTACTGAC +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKMKEAG*LSKVTD
Trigger: GTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCAT...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CTCACTATTTTCCTCCTTCTGGCTGCTCTGCTGCTCTGGACACTCAAAGTGGACATGAAGGAGGCAGGCTaGCTTTCAAAAGTTACTGAC +
Preference number: 4 (lower is better)
Translates to: LTIFLLLAALLLWTLKVDMKEAG*LSKVTD
Trigger: GTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCAT...GTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAAATAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAATGAAGGAGGCAGGCTaGCTTTCAAAAGTTACTGAC +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPMKEAG*LSKVTD
Trigger: GTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCAT...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCACTTCCTCCTGTTCCCTaGGCCTGGGCTAGATTAGAG +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSLPPVP*AWARLE
Trigger: CTCTAATCTAGCCCAGGCGCAGGGAACAGGAGGAAG...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTCTCCGCCTGAGTGTTTaGGTGCCATTTTTGTATTCC +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFLRLSV*VPFLYS
Trigger: GGAATACAAAAATGGCACGCAAACACTCAGGCGGAG...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGTCCACAGGTTGATTTaGTTGTGTGCATTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQVHRLI*LCAFVA
Trigger: TGCCACAAATGCACACAAGCAAATCAACCTGTGGAC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTTCCAGTTGTCCTGCATaGCATTTAAACCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRASSCPA*HLNLAL
Trigger: AAGGGCAAGGTTTAAATGGCATGCAGGACAACTGGA...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGACGCAAATGGTAAATaGTCCCAGACATTTATCATA +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNDANGK*SQTFII
Trigger: TATGATAAATGTCTGGGAGCATTTACCATTTGCGTC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCACTGTCCCTTTGGAGCTaGAATGGCCACAGTGATGGC +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSLSLWS*NGHSDG
Trigger: GCCATCACTGTGGCCATTGCAGCTCCAAAGGGACAG...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649492.1
CDS-3UTR CCA 90 bp TCACTATTTTCCTCCTTCTGGCTGCTCTGCTGCTCTGGACACTCAAAGTGGACAATGGTCCACTGTTGCTaGTTGGTAGAAACCTCAACG +
Preference number: 4 (lower is better)
Translates to: SLFSSFWLLCCSGHSKWTMVHCC*LVETST
Trigger: CGTTGAGGTTTCTACCAACCAGCAACAGTGGACCAT...TGTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAAATAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGGTCCACTGTTGCTaGTTGGTAGAAACCTCAACG +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSMVHCC*LVETST
Trigger: CGTTGAGGTTTCTACCAACCAGCAACAGTGGACCAT...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGAGAATGAACACTCTATaGAGGCCCATTCCTAAAGGG +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQRMNTL*RPIPKG
Trigger: CCCTTTAGGAATGGGCCTCCATAGAGTGTTCATTCT...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAAGAATGAACACTCTATaGAGGCCCATTCCTAAAGGG +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPRMNTL*RPIPKG
Trigger: CCCTTTAGGAATGGGCCTCCATAGAGTGTTCATTCT...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGCAGAAAATCCTAGCTaGAAGGCCGTGGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFAENPS*KAVGLG
Trigger: CCCAAGCCCCACGGCCTTCCAGCTAGGATTTTCTGC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGGCCATGAGGCCTCTTaGGGACTATTTCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFGHEAS*GLFQFF
Trigger: AAAGAACTGAAATAGTCCCCAAGAGGCCTCATGGCC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTCTTGAGAGGACTTCCTaGGCATTCCTATCCATAAAC +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFLERTS*AFLSIN
Trigger: GTTTATGGATAGGAATGCTCAGGAAGTCCTCTCAAG...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGAGGCAGGCTGCCTTTCAAAAGTTACTGACTGCCAGGACTTGCAGGAGACTTTGATAATGGATGGCTaGCCTAGCTTAATCTCGATG +
Preference number: 4 (lower is better)
Translates to: KEAGCLSKVTDCQDLQETLIMDG*PSLISM
Trigger: CATCGAGATTAAGCTAGGTCAGCCATCCATTATCAA...AGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTTTGATAATGGATGGCTaGCCTAGCTTAATCTCGATG +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRALIMDG*PSLISM
Trigger: CATCGAGATTAAGCTAGGTCAGCCATCCATTATCAA...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp ATTCAGCAAGGCATTTCGGCTCCGACTGACTCCTTCAATCACACTGGCACAATCCACTTCAATGAAGTATaGGTAAGACCGGCTATCTCG +
Preference number: 4 (lower is better)
Translates to: IQQGISAPTDSFNHTGTIHFNEV*VRPAIS
Trigger: CGAGATAGCCGGTCTTACTCATACTTCATTGAAGTG...GATTGTGCCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAATGCCTTGCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCTTGGAGAGGAATTTCTaGTTCAGGCTGAGACTCTCG +
Preference number: 4 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPLERNF*FRLRLS
Trigger: CGAGAGTCTCAGCCTGAAGCAGAAATTCCTCTCCAA...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTCAAAAGTTACTGACTaGCAGGACTTGCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSSKVTD*QDLQET
Trigger: AGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCATTTCCTCCTTCTGGCTaGTCTGCTGCTCTGGACACT +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSFPPSG*SAALDT
Trigger: AGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAA...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ATTCGAATATACCTTTTGAGGACTTTGCACTGTCACTGTCAGTTAGATCCCTCTCTCCTTTATTGGTGCTaGCGGTTGGGGGAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: IRIYLLRTLHCHCQLDPSLLYWC*RLGERE
Trigger: CTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAG...AGAGGGATCTAACTGACAGTGACAGTGCAAAGTCCTCAAAAGGTATATTCGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGAGGAAGTGCTGTGTGTaGAGGAGCTCTCTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMRKCCV*RSSLAN
Trigger: ATTAGCCAGAGAGCTCCTGCACACACAGCACTTCCT...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTGCAGAATCAATGGCTaGAGCTGCCAAAACAAATGG +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSCRING*SCQNKW
Trigger: CCATTTGTTTTGGCAGCTGCAGCCATTGATTCTGCA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGCCGCTTAGGTTGCTCTaGAAAATGAGGAAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMPLRLL*KMRKKP
Trigger: CGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGG...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTTCTGCAGTGGTGTCTTaGAGAGGAATTTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFSAVVS*RGISAS
Trigger: TGAAGCAGAAATTCCTCTCCAAGACACCACTGCAGA...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGTCCCCCTTTACAACTTaGGCTCCATACTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQSPFTT*APYFIV
Trigger: AACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGA...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTGCTGCTCTGCTGCTCTaGACACTCAAAGTGGACACA +
Preference number: 4 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASAALLL*TLKVDT
Trigger: TGTGTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGC...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCAGAATGAACACTCTATaGAGGCCCATTCCTAAAGGG +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSRMNTL*RPIPKG
Trigger: CCCTTTAGGAATGGGCCTCCATAGAGTGTTCATTCT...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGAGGAGAAAAGCTTCTTaGAACTGCTATTTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTRRKAS*NCYFSV
Trigger: GACTGAAAAATAGCAGTTCCAAGAAGCTTTTCTCCT...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCCAGGCAGCACTGGAATaGAAATCACTAAGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSQAALE*KSLSRR
Trigger: TCTCCTACTTAGTGATTTCCATTCCAGTGCTGCCTG...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTTGTCAGCGAGAGAGATaGGGGCATTCCAGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASCQRER*GHSSCP
Trigger: AGGACAACTGGAATGCCCCCATCTCTCTCGCTGACA...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGCCCTTGCATCAGAGTaGCCTGGGAGGTACACACAT +
Preference number: 4 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFALASE*PGRYTH
Trigger: ATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAAATGCTCGAAAATATTaGCACCTGGCTGCTAAAATT +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPENARKY*HLAAKI
Trigger: AATTTTAGCAGCCAGGTGCCAATATTTTCGAGCATT...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481247.6
CDS-3UTR TCA 90 bp GCATTTCGGCTCCGACTGACTCCTTCAATCACACTGGCACAATCAGCAATTGTTCTTGAGAGGACTTCCTaGGCATTCCTATCCATAAAC +
Preference number: 4 (lower is better)
Translates to: AFRLRLTPSITLAQSAIVLERTS*AFLSIN
Trigger: GTTTATGGATAGGAATGCTCAGGAAGTCCTCTCAAG...AACAATTGCTGATTGTGCCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCATGCATGATTTCAGCATaGTTCTCCTTTGAATTGTGC +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPCMISA*FSFELC
Trigger: GCACAATTCAAAGGAGAATCATGCTGAAATCATGCA...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTGGAACACCTCATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAAGGAGGCAATGATCTATCACTCTaGCCCAATCAAGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: VEHLICCVVCPNDTDEGGNDLSL*PNQVHP
Trigger: TGGATGAACTTGATTGGGTCAGAGTGATAGATCATT...GCCTCCTTCATCCGTATCGTTGGGACACACAACACAGCAAATGAGGTGTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGAATAATAATGAAAAGTaGAGGGTGGGGGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMNNNEK*RVGVLA
Trigger: GGCCAGCACCCCCACCCTTCACTTTTCATTATTATT...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCATTTCGGCTCCGACTGACTCCTTCAATCACACTGGCACAATCAGCAATTGTTAATCATGTACGGTTGTaGCAACTGAACCACAATCGC +
Preference number: 4 (lower is better)
Translates to: AFRLRLTPSITLAQSAIVNHVRL*QLNHNR
Trigger: GCGATTGTGGTTCAGTTGGCACAACCGTACATGATT...AACAATTGCTGATTGTGCCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp CAATCACACTGGCACAATCAGCAATTGTTGCAACATTCTCCATGGGAACTATCATTCTGGCTGCTCTGCTaGTCTGGACACTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: QSHWHNQQLLQHSPWELSFWLLC*SGHSKW
Trigger: CCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAA...TGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTGTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp CAATCACACTGGCACAATCAGCAATTGTTGCAACATTCTCCATGGGAACTATCATCCTTCTGGCTGCTCTaGTGCTCTGGACACTCAAAG +
Preference number: 4 (lower is better)
Translates to: QSHWHNQQLLQHSPWELSSFWLL*CSGHSK
Trigger: CTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGA...TGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTGTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCGTTGATTTGCTTGTGTaGATTTGTGGCACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSVDLLV*ICGTSS
Trigger: AGAGGAAGTGCCACAAATGCACACAAGCAAATCAAC...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCTCTGCAGTGGTGTCTTaGAGAGGAATTTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPSAVVS*RGISAS
Trigger: TGAAGCAGAAATTCCTCTCCAAGACACCACTGCAGA...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CACTGGCACAATCAGCAATTGTTGCAACATTCTCCATGGGAACTATCAGCCCCTTCTGCAGTGGTGTCTTaGAGAGGAATTTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: HWHNQQLLQHSPWELSAPSAVVS*RGISAS
Trigger: TGAAGCAGAAATTCCTCTCCAAGACACCACTGCAGA...AGGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp ACACTGGCACAATCAGCAATTGTTGCAACATTCTCCATGGGAACTATCAGCCCCTTGCAACATTCTCCATaGGAACTATCAGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TLAQSAIVATFSMGTISPLQHSP*ELSAPS
Trigger: AGAAGGGGCTGATAGTTCCCATGGAGAATGTTGCAA...GGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp ATTCTTAGTGTCCCCATTCAGCAAGGCATTTCGGCTCCGACTGACTCCTTCAATTCAAAGTGGACACAGTaGAACACCTCATTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ILSVPIQQGISAPTDSFNSKWTQ*NTSFAV
Trigger: CACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGA...ATTGAAGGAGTCAGTCGGAGCCGAAATGCCTTGCTGAATGGGGACACTAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCCAGGCAGCACTGGAATaGAAATCACTAAGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPQAALE*KSLSRR
Trigger: TCTCCTACTTAGTGATTTCCATTCCAGTGCTGCCTG...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGAATATGCAGAATCAATaGCTGCAGCTGCCAAAACAA +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQNMQNQ*LQLPKQ
Trigger: TTGTTTTGGCAGCTGCAGCCATTGATTCTGCATATT...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGTGATTTTCAAACAATaGTGTGTCGGGTGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFVIFKQ*CVGWGG
Trigger: GCCGCCCCACCCGACACACCATTGTTTGAAAATCAC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAGAAAATATTGGCACCTaGCTGCTAAAATTACCCTGT +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPENIGT*LLKLPC
Trigger: ACAGGGTAATTTTAGCAGCCAGGTGCCAATATTTTC...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACACTGGCACAATCAGCAATTGTTGCAACATTCTCCATGGGAACTATCAGCCCCGGAAATCCATATTTATaGGCCAGGCTCAAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: TLAQSAIVATFSMGTISPGNPYL*ARLKKS
Trigger: GGACTTTTTGAGCCTGGCTCATAAATATGGATTTCC...GGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGCTTGAGAGGACTTCCTaGGCATTCCTATCCATAAAC +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMLERTS*AFLSIN
Trigger: GTTTATGGATAGGAATGCTCAGGAAGTCCTCTCAAG...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ATTCGAATATACCTTTTGAGGACTTTGCACTGTCACTGTCAGTTAGATCCCTCTAGGAGACAGCAGTCCTaGAGGCCTCACAACATTCAG +
Preference number: 4 (lower is better)
Translates to: IRIYLLRTLHCHCQLDPSRRQQS*RPHNIQ
Trigger: CTGAATGTTGTGAGGCCTTCAGGACTGCTGTCTCCT...AGAGGGATCTAACTGACAGTGACAGTGCAAAGTCCTCAAAAGGTATATTCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCCACAGATATTGTGAATaGTCTATCACTCTGACCCAA +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSHRYCE*SITLTQ
Trigger: TTGGGTCAGAGTGATAGATCATTCACAATATCTGTG...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTTTTAATCACGCAGTTTaGTGCTACCCTACTATTTCC +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFFNHAV*CYPTIS
Trigger: GGAAATAGTAGGGTAGCATCAAACTGCGTGATTAAA...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ATTCGAATATACCTTTTGAGGACTTTGCACTGTCACTGTCAGTTAGATCCCTCTTTTCCTCCTTCTGGCTaGTCTGCTGCTCTGGACACT +
Preference number: 4 (lower is better)
Translates to: IRIYLLRTLHCHCQLDPSFPPSG*SAALDT
Trigger: AGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAA...AGAGGGATCTAACTGACAGTGACAGTGCAAAGTCCTCAAAAGGTATATTCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGGTCCACAGGTTGATTTaGTTGTGTGCATTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMVHRLI*LCAFVA
Trigger: TGCCACAAATGCACACAAGCAAATCAACCTGTGGAC...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCCTAGGGCCGAGGCTTTaGAGCGTATTCCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFLGPRL*SVFLFR
Trigger: TCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAG...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CACTGGCACAATCAGCAATTGTTGCAACATTCTCCATGGGAACTATCAGCCCCTGAAGTGAGTAGAGACTaGCAACATCAAAAGTCATGC +
Preference number: 4 (lower is better)
Translates to: HWHNQQLLQHSPWELSAPEVSRD*QHQKSC
Trigger: GCATGACTTTTGATGTTGCCAGTCTCTACTCACTTC...AGGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp ATTCTTAGTGTCCCCATTCAGCAAGGCATTTCGGCTCCGACTGACTCCTTCAATTCCCCCTTTACAACTTaGGCTCCATACTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: ILSVPIQQGISAPTDSFNSPFTT*APYFIV
Trigger: AACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGA...ATTGAAGGAGTCAGTCGGAGCCGAAATGCCTTGCTGAATGGGGACACTAAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCACCCAAGCTTAAAGGCTaGATCCATGTCAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSPKLKG*IHVRND
Trigger: GTCATTCCTGACATGGATCCAGCCTTTAAGCTTGGG...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAAGGAGAAAAGCTTCTTaGAACTGCTATTTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPRRKAS*NCYFSV
Trigger: GACTGAAAAATAGCAGTTCCAAGAAGCTTTTCTCCT...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 72 bp CACTTTAAATTCCTAACTGAACTCCTGCCGGGGCTGTaGTCAGGAAAAATATGCAGAATCAATGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HFKFLTELLPGL*SGKICRINGCS
Trigger: GCTGCAGCCATTGATTCTGCATATTTTTCCTGACAACAGCCCCGGCAGGAGTTCAGTTAGGAATTTAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 72 bp GGAGACTTTAGTTCTGTCAGCAACCATGGTCCACTGTaGCTGGTTGGTAGAAACCTCAACGTAGTAGCTATA +
Preference number: 4 (lower is better)
Translates to: GDFSSVSNHGPL*LVGRNLNVVAI
Trigger: TATAGCTACTACGTTGAGGTTTCTACCAACCAGCAACAGTGGACCATGGTTGCTGACAGAACTAAAGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp ACACTGGCACAATCAGCAATTGTTGCAACATTCTCCATGGGAACTATCAGCCCCATCCCCAATCCTGTATaGTCCATGGTATTTATTTGG +
Preference number: 4 (lower is better)
Translates to: TLAQSAIVATFSMGTISPIPNPV*SMVFIW
Trigger: CCAAATAAATACCATGGATCATACAGGATTGGGGAT...GGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCACACTTCAATGAAGTATaGGTAAGACCGGCTATCTCG +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSHFNEV*VRPAIS
Trigger: CGAGATAGCCGGTCTTACTCATACTTCATTGAAGTG...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACACTGGCACAATCAGCAATTGTTGCAACATTCTCCATGGGAACTATCAGCCCCCACAGATATTGTGAATaGTCTATCACTCTGACCCAA +
Preference number: 4 (lower is better)
Translates to: TLAQSAIVATFSMGTISPHRYCE*SITLTQ
Trigger: TTGGGTCAGAGTGATAGATCATTCACAATATCTGTG...GGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp AATTCGAATATACCTTTTGAGGACTTTGCACTGTCACTGTCAGTTAGATCCCTCTACGGTTGTGCCAACTaGACCACAATCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: NSNIPFEDFALSLSVRSLYGCAN*TTIAPL
Trigger: AAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTA...GAGGGATCTAACTGACAGTGACAGTGCAAAGTCCTCAAAAGGTATATTCGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGATCCGGAACACCTATaGTTCACTGAGTGGAGAATA +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSDPEHL*FTEWRI
Trigger: TATTCTCCACTCAGTGAATCATAGGTGTTCCGGATC...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAAATCATGTACGGTTGTaGCAACTGAACCACAATCGC +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSNHVRL*QLNHNR
Trigger: GCGATTGTGGTTCAGTTGGCACAACCGTACATGATT...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGTCCCCCTTTACAACTTaGGCTCCATACTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMSPFTT*APYFIV
Trigger: AACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGA...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCCCCAAGCTTAAAGGCTaGATCCATGTCAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFPKLKG*IHVRND
Trigger: GTCATTCCTGACATGGATCCAGCCTTTAAGCTTGGG...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCACAGGCAGCACTGGAATaGAAATCACTAAGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSQAALE*KSLSRR
Trigger: TCTCCTACTTAGTGATTTCCATTCCAGTGCTGCCTG...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCATTGATAATGGATGGCTaGCCTAGCTTAATCTCGATG +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSLIMDG*PSLISM
Trigger: CATCGAGATTAAGCTAGGTCAGCCATCCATTATCAA...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGATCCGGAACACCTATaGTTCACTGAGTGGAGAATA +
Preference number: 4 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFDPEHL*FTEWRI
Trigger: TATTCTCCACTCAGTGAATCATAGGTGTTCCGGATC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GTAACCGTATTGACCCAATCATGTACGGTTGTGCCAACTGAACCACAATCGCACTGCAATGTTTTCTTCTaGTATGAGCATGCCTCTATA +
Preference number: 4 (lower is better)
Translates to: VTVLTQSCTVVPTEPQSHCNVFF*YEHASI
Trigger: TATAGAGGCATGCTCATACCAGAAGAAAACATTGCA...GTGCGATTGTGGTTCAGTTGGCACAACCGTACATGATTGGGTCAATACGGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGTGCAATGTTTTCTTCTaGTATGAGCATGCCTCTATA +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMCNVFF*YEHASI
Trigger: TATAGAGGCATGCTCATACCAGAAGAAAACATTGCA...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGAAAATATTGGCACCTaGCTGCTAAAATTACCCTGT +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSENIGT*LLKLPC
Trigger: ACAGGGTAATTTTAGCAGCCAGGTGCCAATATTTTC...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AATTCGAATATACCTTTTGAGGACTTTGCACTGTCACTGTCAGTTAGATCCCTCGTCATGCAGACATTCTaGATGTTAAGTATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: NSNIPFEDFALSLSVRSLVMQTF*MLSMVQ
Trigger: CTGCACCATACTTAACATTCAGAATGTCTGCATGAC...GAGGGATCTAACTGACAGTGACAGTGCAAAGTCCTCAAAAGGTATATTCGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCAATATGCAGAATCAATaGCTGCAGCTGCCAAAACAA +
Preference number: 4 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFNMQNQ*LQLPKQ
Trigger: TTGTTTTGGCAGCTGCAGCCATTGATTCTGCATATT...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp ATTCGAATATACCTTTTGAGGACTTTGCACTGTCACTGTCAGTTAGATCCCTCTTGCATGATTTCAGCATaGTTCTCCTTTGAATTGTGC +
Preference number: 4 (lower is better)
Translates to: IRIYLLRTLHCHCQLDPSCMISA*FSFELC
Trigger: GCACAATTCAAAGGAGAATCATGCTGAAATCATGCA...AGAGGGATCTAACTGACAGTGACAGTGCAAAGTCCTCAAAAGGTATATTCGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS GCA 90 bp CTTGGCCGCTTCCGTGGCCGCCGTCCTCGCCGCCGCCCCGGCTGCTaGGGCGCGCGTCCGCTTTCACGCACTCCGCCGTGGCCGCGCACG +
Preference number: 5 (lower is better)
Translates to: LGRFRGRRPRRRPGC*GARPLSRTPPWPRT
Trigger: CGTGCGCGGCCACGGCGGAGTGCGTGAAAGCGGACGCGCGCCGCAGCAGCCGGGGCGGCGGCGAGGACGGCGGCCACGGAAGCGGCCAAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497373.1
CDS GCA 90 bp GCGCGTCCGCTTTCACGCACTCCGCCGTGGCCGCGCACGCGCCACTaGGCGCTGGCGTCACTTAGCAACCGATCGACAGCGGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: ARPLSRTPPWPRTRH*ALASLSNRSTAGCW
Trigger: CCAGCAGCCCGCTGTCGATCGGTTGCTAAGTGACGCCAGCGCGCAGTGGCGCGTGCGCGGCCACGGCGGAGTGCGTGAAAGCGGACGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497373.1
CDS CCA 90 bp CGCTTTCACGCACTCCGCCGTGGCCGCGCACGCGCCACTGCGCGCTaGCGTCACTTAGCAACCGATCGACAGCGGGCTGCTGGGTCCGGC +
Preference number: 5 (lower is better)
Translates to: RFHALRRGRARATAR*RHLATDRQRAAGSG
Trigger: GCCGGACCCAGCAGCCCGCTGTCGATCGGTTGCTAAGTGACGCCAGCGCGCAGTGGCGCGTGCGCGGCCACGGCGGAGTGCGTGAAAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497373.1
CDS-3UTR CAA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCCGCTGCCTCCTTTATaGGTGCTGCCGGTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRPLPPL*VLPVGG
Trigger: TCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCGG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGGAAGCGGCTGACCCGTaGGCTCTTTCTAGAGCGCAG +
Preference number: 5 (lower is better)
Translates to: GQAPSKARGRRAGSAAVREAADP*ALSRAQ
Trigger: CTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTTC...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS GCA 90 bp CGCCACTGCGCGCTGGCGTCACTTAGCAACCGATCGACAGCGGGCTaGTGGGTCCGGCGATGCAGGCCCAGAAAGTCGCCTAAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: RHCALASLSNRSTAG*WVRRCRPRKSPKAA
Trigger: AGCTGCCTTAGGCGACTTTCTGGGCCTGCATCGCCGGACCCAGCAGCCCGCTGTCGATCGGTTGCTAAGTGACGCCAGCGCGCAGTGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497373.1
CDS CCA 90 bp TTGCCCGAGCCCACCAAGTCACACCAGGCCCGCTGCCTCCTTTATTaGTGCTGCCGGTTGGGGGAGCGTGAGTTGGAGCCTGGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LPEPTKSHQARCLLY*CCRLGERELEPGLE
Trigger: CTCCAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCGGGCCTGGTGTGACTTGGTGGGCTCGGGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS CCA 90 bp CACTGCGCGCTGGCGTCACTTAGCAACCGATCGACAGCGGGCTGCTaGGTCCGGCGATGCAGGCCCAGAAAGTCGCCTAAGGCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: HCALASLSNRSTAGC*VRRCRPRKSPKAAS
Trigger: GGAAGCTGCCTTAGGCGACTTTCTGGGCCTGCATCGCCGGACCCAGCAGCCCGCTGTCGATCGGTTGCTAAGTGACGCCAGCGCGCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497373.1
CDS-3UTR CAA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCTTGGGGGAGCGTGAGTaGGAGCCTGGGCTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPLGERE*EPGLEG
Trigger: ACCCTCCAGCCCAGGCTCCAACTCACGCTCCCCCAA...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGTTGGGGGAGCGTGAGTaGGAGCCTGGGCTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: DGELQTLASPQERVHPAPLGERE*EPGLEG
Trigger: ACCCTCCAGCCCAGGCTCCAACTCACGCTCCCCCAA...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTCTAGGGCCGAGGCTTaGCAGCGTATTCCTTTTCAG +
Preference number: 5 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSRAEA*QRIPFQ
Trigger: CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCGTGACACACCTTGACTaGGCCTCCAGGCCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVVTHLD*ASRPSW
Trigger: CCAGCTGGGCCTGGAGGCCAAGTCAAGGTGTGTCAC...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGTGACACACCTTGACTaGGCCTCCAGGCCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TPRLMLMATEAGALGTAEVTHLD*ASRPSW
Trigger: CCAGCTGGGCCTGGAGGCCAAGTCAAGGTGTGTCAC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS GCA 90 bp CGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCACACCAGGCCCGCTaGCTCCTTTATTGGTGCTGCCGGTTGGGGGAGCGTGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: RFLPLPEPTKSHQAR*LLYWCCRLGERELE
Trigger: CTCCAACTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCGGGCCTGGTGTGACTTGGTGGGCTCGGGCAACGGCAGGAAACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGAACCATGGTCCACTGTaGCTGGTTGGTAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRNHGPL*LVGRNL
Trigger: GAGGTTTCTACCAACCAGCAACAGTGGACCATGGTT...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGACCGTTTCCTGCCGTaGCCCGAGCCCACCAAGTCA +
Preference number: 5 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPDRFLP*PEPTKS
Trigger: TGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCCTCCGCCTGAGTGTTaGCGTGCCATTTTTGTATTC +
Preference number: 5 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRPPPEC*RAIFVF
Trigger: GAATACAAAAATGGCACGCAAACACTCAGGCGGAGG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACAGTCCCCGGCAGGTTaGGCCACGCCAGAACTCGGT +
Preference number: 5 (lower is better)
Translates to: QAAISFPEHRRALRALWAQSPAG*ATPELG
Trigger: ACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGATCAGGGTTGCAGGTaGGCGCCGAAGACCCAAGGA +
Preference number: 5 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPDQGCR*APKTQG
Trigger: TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGATCAGGGTTGCAGGTaGGCGCCGAAGACCCAAGGA +
Preference number: 5 (lower is better)
Translates to: TPRLMLMATEAGALGTAEDQGCR*APKTQG
Trigger: TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS GCA 90 bp GCGTCACTTAGCAACCGATCGACAGCGGGCTGCTGGGTCCGGCGATaGAGGCCCAGAAAGTCGCCTAAGGCAGCTTCCGCGGCTTTTTCG +
Preference number: 5 (lower is better)
Translates to: ASLSNRSTAGCWVRR*RPRKSPKAASAAFS
Trigger: CGAAAAAGCCGCGGAAGCTGCCTTAGGCGACTTTCTGGGCCTGCATCGCCGGACCCAGCAGCCCGCTGTCGATCGGTTGCTAAGTGACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497373.1
CDS-3UTR CAA 90 bp AAGTCACACCAGGCCCGCTGCCTCCTTTATTGGTGCTGCCGGTTGGGGGAGCGTCCGCTGCCTCCTTTATaGGTGCTGCCGGTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: KSHQARCLLYWCCRLGERPLPPL*VLPVGG
Trigger: TCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCGG...ACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCGGGCCTGGTGTGACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CAA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGTTCGGTGTCTGCTTTaGCAGCTAGGTCGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: TPRLMLMATEAGALGTAEVRCLL*QLGRLL
Trigger: GAGGAGCCGACCTAGCTGCAAAAGCAGACACCGAAC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACAGTCCCCGGCAGGTTaGGCCACGCCAGAACTCGGT +
Preference number: 5 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGQSPAG*ATPELG
Trigger: ACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTG...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCCAGTCCCCGGCAGGTTaGGCCACGCCAGAACTCGGT +
Preference number: 5 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSQSPAG*ATPELG
Trigger: ACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTG...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACCACCTCTCTCCATGTaGGCTTGTTGCCCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: QAAISFPEHRRALRALWAPPLSM*ACCPWG
Trigger: GCCCCAGGGGCAACAAGCCAACATGGAGAGAGGTGG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGCCGCAGTGACAGCCTaGGGGAGGCTGAGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNAAVTA*GRLRGL
Trigger: GAGCCCCCTCAGCCTCCCCAAGGCTGTCACTGCGGC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGCCGCAGTGACAGCCTaGGGGAGGCTGAGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: VATHLSLFPGDEVLALVCAAVTA*GRLRGL
Trigger: GAGCCCCCTCAGCCTCCCCAAGGCTGTCACTGCGGC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATATTGGTGCTGCCGGTaGGGGGAGCGTGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: QAAISFPEHRRALRALWAYWCCR*GERELE
Trigger: CTCCAACTCACGCTCCCCCAACCGGCAGCACCAATA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGTTCGGTGTCTGCTTTaGCAGCTAGGTCGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GSQQRPLLREETVSCRCPVRCLL*QLGRLL
Trigger: GAGGAGCCGACCTAGCTGCAAAAGCAGACACCGAAC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGCTGGTAGCCACTCACTaGTCCCTGTTCCCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: TPRLMLMATEAGALGTAELVATH*SLFPGD
Trigger: ATCTCCAGGGAACAGGGACAAGTGAGTGGCTACCAG...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCCTGGTAGCCACTCACTaGTCCCTGTTCCCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVLVATH*SLFPGD
Trigger: ATCTCCAGGGAACAGGGACAAGTGAGTGGCTACCAG...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCTCCATGTTGGCTTGTaGCCCCTGGGGCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHLHVGL*PLGLAW
Trigger: CCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGAG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS TCA 90 bp GAAATACAGCAGGGCCAAATTGAGACGAGCCCAGCGATGCTCCTCTaGGACCAAGCTGCGACACAGACGCCTCTTCCGCCCGCTCCGCAC +
Preference number: 5 (lower is better)
Translates to: EIQQGQIETSPAMLL*DQAATQTPLPPAPH
Trigger: GTGCGGAGCGGGCGGAAGAGGCGTCTGTGTCGCAGCTTGGTCTCAGAGGAGCATCGCTGGGCTCGTCTCAATTTGGCCCTGCTGTATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498633.1
ENST00000649492.1
CDS GCA 90 bp AGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTaGCCGAGCCCACCAAGTCACACCAGGCCCGCTGCCTCCTTTATT +
Preference number: 5 (lower is better)
Translates to: SQQRPLLREETVSCR*PSPPSHTRPAASFI
Trigger: AATAAAGGAGGCAGCGGGCCTGGTGTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCCGCTGCCTCCTTTATaGGTGCTGCCGGTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHPLPPL*VLPVGG
Trigger: TCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCGG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAGAAGCGGCTGACCCGTaGGCTCTTTCTAGAGCGCAG +
Preference number: 5 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGEAADP*ALSRAQ
Trigger: CTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTTC...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCCACCTCTCTCCATGTaGGCTTGTTGCCCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHPPLSM*ACCPWG
Trigger: GCCCCAGGGGCAACAAGCCAACATGGAGAGAGGTGG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAAGGCCTGGAGAGCCTaGGGGAGAGATCAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: VPALASEWPGRYTHLYRPKAWRA*GRDQAP
Trigger: TGGGGCCTGATCTCTCCCCAAGGCTCTCCAGGCCTT...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCAAGGCTGGGAGGCTCTaGTTCTCTGGTGAATCCGGA +
Preference number: 5 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPKAGRL*FSGESG
Trigger: TCCGGATTCACCAGAGAACAAGAGCCTCCCAGCCTT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCATCAATTGGGTGCCTaGAAAATCCATGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRHQLGA*KIHDPN
Trigger: ATTTGGATCATGGATTTTCAAGGCACCCAATTGATG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGACCTCATTTGCTGTGTaGTGTGTCCCAACGATACGG +
Preference number: 5 (lower is better)
Translates to: TPRLMLMATEAGALGTAETSFAV*CVPTIR
Trigger: CCGTATCGTTGGGACACACAACACAGCAAATGAGGT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGCCGCTGCCTCCTTTATaGGTGCTGCCGGTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQPLPPL*VLPVGG
Trigger: TCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCGG...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGACCGTTTCCTGCCGTaGCCCGAGCCCACCAAGTCA +
Preference number: 5 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNDRFLP*PEPTKS
Trigger: TGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGACCGTTTCCTGCCGTaGCCCGAGCCCACCAAGTCA +
Preference number: 5 (lower is better)
Translates to: VATHLSLFPGDEVLALVCDRFLP*PEPTKS
Trigger: TGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCGCCCTCACCCTCCTTaGATCAGGGTTGCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHRPHPP*IRVAGW
Trigger: CCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCTCCATGTTGGCTTGTaGCCCCTGGGGCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFLHVGL*PLGLAW
Trigger: CCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGAG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTCTCTCCATGTTGGCTaGTTGCCCCTGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEISLHVG*LPLGLA
Trigger: GGCCAGCCCCAGGGGCAACAAGCCAACATGGAGAGA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTTCTCTCCATGTTGGCTaGTTGCCCCTGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: VATHLSLFPGDEVLALVCSLHVG*LPLGLA
Trigger: GGCCAGCCCCAGGGGCAACAAGCCAACATGGAGAGA...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGTGACCATGGCGCCCTaGTGTCCTTTCCATTGGTTA +
Preference number: 5 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPVTMAP*CPFHWL
Trigger: TAACCAATGGAAAGGACACAAGGGCGCCATGGTCAC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCATCTGCACAGCAGTTaGACAACTGGGGCGACAGCA +
Preference number: 5 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALHLHSS*TTGATA
Trigger: TGCTGTCGCCCCAGTTGTCAAACTGCTGTGCAGATG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGGAAGGCCGTGGGGCTaGGGGCCAGCACTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEGRPWG*GPALCK
Trigger: TTTGCACAGTGCTGGCCCCAAGCCCCACGGCCTTCC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGGAAGGCCGTGGGGCTaGGGGCCAGCACTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCGRPWG*GPALCK
Trigger: TTTGCACAGTGCTGGCCCCAAGCCCCACGGCCTTCC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCTCCCCCTTTACAACTaGGGCTCCATACTTCATAGT +
Preference number: 5 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPLPLYN*GSILHS
Trigger: ACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGAG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGACTGACTGCCAGGACTaGCAGGAGACTTTAGTTCTG +
Preference number: 5 (lower is better)
Translates to: GSQQRPLLREETVSCRCPTDCQD*QETLVL
Trigger: CAGAACTAAAGTCTCCTGCAAGTCCTGGCAGTCAGT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCACTGACTGCCAGGACTaGCAGGAGACTTTAGTTCTG +
Preference number: 5 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPTDCQD*QETLVL
Trigger: CAGAACTAAAGTCTCCTGCAAGTCCTGGCAGTCAGT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGTATTGGTGCTGCCGGTaGGGGGAGCGTGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQYWCCR*GERELE
Trigger: CTCCAACTCACGCTCCCCCAACCGGCAGCACCAATA...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTCAAATGAGGTCCTTTaGATGAGGATTAGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSNEVL*MRIRRK
Trigger: TTTTCTCCTAATCCTCATCAAAAGGACCTCATTTGA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTCGCCCTCACCCTCCTTaGATCAGGGTTGCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: VATHLSLFPGDEVLALVCRPHPP*IRVAGW
Trigger: CCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCG...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCCACCTCTCTCCATGTaGGCTTGTTGCCCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: PGAHVVGSNLAADGLISTPPLSM*ACCPWG
Trigger: GCCCCAGGGGCAACAAGCCAACATGGAGAGAGGTGG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCTTGTGTCCTTTCCATaGGTTACTGAGGACCATTGC +
Preference number: 5 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGELVSFP*VTEDHC
Trigger: GCAATGGTCCTCAGTAACCAATGGAAAGGACACAAG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGCCTTCCTTTTCCCCCTaGGCTCTGGAAAGGATAAGT +
Preference number: 5 (lower is better)
Translates to: DGELQTLASPQERVHPAPPSFSP*ALERIS
Trigger: ACTTATCCTTTCCAGAGCCAAGGGGGAAAAGGAAGG...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCTCTCATCTGTCAGCGTaGCCCGCCCAGTGTAGATAT +
Preference number: 5 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSSHLSA*PAQCRY
Trigger: ATATCTACACTGGGCGGGCAACGCTGACAGATGAGA...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGAGGAAACCTTCACTaGAGAGGACTTCCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: GSQQRPLLREETVSCRCPRGNLH*RGLPEH
Trigger: ATGCTCAGGAAGTCCTCTCAAGTGAAGGTTTCCTCT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp TGCCTCCTTTATTGGTGCTGCCGGTTGGGGGAGCGTGAGTTGGAGCCTGGGCTGACCTCATTTGCTGTGTaGTGTGTCCCAACGATACGG +
Preference number: 5 (lower is better)
Translates to: CLLYWCCRLGERELEPGLTSFAV*CVPTIR
Trigger: CCGTATCGTTGGGACACACAACACAGCAAATGAGGT...CAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CAA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCTATTGGTGCTGCCGGTaGGGGGAGCGTGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFYWCCR*GERELE
Trigger: CTCCAACTCACGCTCCCCCAACCGGCAGCACCAATA...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCCACAGGTTGATTTGCTaGTGTGCATTTGTGGCACTT +
Preference number: 5 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVHRLIC*CAFVAL
Trigger: AAGTGCCACAAATGCACACAAGCAAATCAACCTGTG...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCATTTTTCAGTCCCCAGTaGAGTACTGTGGTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSFFSPQ*STVVWG
Trigger: CCCCCACACCACAGTACTCAACTGGGGACTGAAAAA...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCGATCAGGGTTGCAGGTaGGCGCCGAAGACCCAAGGA +
Preference number: 5 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFDQGCR*APKTQG
Trigger: TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATC...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGAAGCGGCTGACCCGTaGGCTCTTTCTAGAGCGCAG +
Preference number: 5 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEEAADP*ALSRAQ
Trigger: CTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTTC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGATCTAGGGCCGAGGCTTaGCAGCGTATTCCTTTTCAG +
Preference number: 5 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGSRAEA*QRIPFQ
Trigger: CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGA...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGAAAAAGAAGGTGAAGTaGACTGGGCTGGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: DGELQTLASPQERVHPAPKKKVK*TGLEPS
Trigger: AGATGGCTCCAGCCCAGTCAACTTCACCTTCTTTTT...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGTGGTGGGGAGCAATTaGGCAGCAGACGGACTAATA +
Preference number: 5 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSVVGSN*AADGLI
Trigger: TATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCAC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAATCGCAAAAGCAGCTCTaGGGCCGAGCTCCAGGCCTA +
Preference number: 5 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPESQKQL*GRAPGL
Trigger: TAGGCCTGGAGCTCGGCCCAAGAGCTGCTTTTGCGA...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTATCTGCCCGCTTAGGTaGCTCTGCAAAATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALICPLR*LCKMRK
Trigger: CTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGAT...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTCACAGTGATGGCCACTaGCCACATGTGGCTACCGAG +
Preference number: 5 (lower is better)
Translates to: VATHLSLFPGDEVLALVCHSDGH*PHVATE
Trigger: CTCGGTAGCCACATGTGGCAAGTGGCCATCACTGTG...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649492.1
CDS-3UTR CAA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATCAGCAAACCAAGGTTaGCTCTCTTGGGCTCATGAG +
Preference number: 5 (lower is better)
Translates to: QAAISFPEHRRALRALWASANQG*LSWAHE
Trigger: CTCATGAGCCCAAGAGAGCAAACCTTGGTTTGCTGA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649492.1
CDS-3UTR CAA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACTCCCCCTTTACAACTaGGGCTCCATACTTCATAGT +
Preference number: 5 (lower is better)
Translates to: QAAISFPEHRRALRALWALPLYN*GSILHS
Trigger: ACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGAG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGGCAGTCATCATCAATaGGGTGCCTTGAAAATCCAT +
Preference number: 5 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPGSHHQ*GALKIH
Trigger: ATGGATTTTCAAGGCACCCAATTGATGATGACTGCC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGCACAATCAGCAATTGTaGCAACATTCTCCATGGGAA +
Preference number: 5 (lower is better)
Translates to: TPRLMLMATEAGALGTAEHNQQL*QHSPWE
Trigger: TTCCCATGGAGAATGTTGCAACAATTGCTGATTGTG...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGTGGCACAATCAGCAATaGTTGCAACATTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: GSQQRPLLREETVSCRCPWHNQQ*LQHSPW
Trigger: CCATGGAGAATGTTGCAACAATTGCTGATTGTGCCA...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACCCAATCATGTACGGTaGTGCCAACTGAACCACAAT +
Preference number: 5 (lower is better)
Translates to: QAAISFPEHRRALRALWAPNHVR*CQLNHN
Trigger: ATTGTGGTTCAGTTGGCACAACCGTACATGATTGGG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCCTGATTTGGATAAATaGAGAAGAACAAAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEPDLDK*RRTKQP
Trigger: GGGCTGCTTTGTTCTTCTCAATTTATCCAAATCAGG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTGGTAGCCACTCACTaGTCCCTGTTCCCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNLVATH*SLFPGD
Trigger: ATCTCCAGGGAACAGGGACAAGTGAGTGGCTACCAG...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTCTCCATGTTGGCTTGTaGCCCCTGGGGCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFLHVGL*PLGLAW
Trigger: CCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGAG...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGTGACCATGGCGCCCTaGTGTCCTTTCCATTGGTTA +
Preference number: 5 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHVTMAP*CPFHWL
Trigger: TAACCAATGGAAAGGACACAAGGGCGCCATGGTCAC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAATCTGCCCGCTTAGGTaGCTCTGCAAAATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSICPLR*LCKMRK
Trigger: CTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGAT...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCAGAGGAAACCTTCACTaGAGAGGACTTCCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSRGNLH*RGLPEH
Trigger: ATGCTCAGGAAGTCCTCTCAAGTGAAGGTTTCCTCT...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAAGAGGAAACCTTCACTaGAGAGGACTTCCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGRGNLH*RGLPEH
Trigger: ATGCTCAGGAAGTCCTCTCAAGTGAAGGTTTCCTCT...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCATCAATTGGGTGCCTaGAAAATCCATGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPHQLGA*KIHDPN
Trigger: ATTTGGATCATGGATTTTCAAGGCACCCAATTGATG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCACAATCAGCAATTGTaGCAACATTCTCCATGGGAA +
Preference number: 5 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPHNQQL*QHSPWE
Trigger: TTCCCATGGAGAATGTTGCAACAATTGCTGATTGTG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACCCAATCATGTACGGTaGTGCCAACTGAACCACAAT +
Preference number: 5 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSPNHVR*CQLNHN
Trigger: ATTGTGGTTCAGTTGGCACAACCGTACATGATTGGG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCAAAGTAGTAACCGTATaGACCCAATCATGTACGGTT +
Preference number: 5 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPKVVTV*TQSCTV
Trigger: AACCGTACATGATTGGGTCAATACGGTTACTACTTT...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCAAAGTAGTAACCGTATaGACCCAATCATGTACGGTT +
Preference number: 5 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVKVVTV*TQSCTV
Trigger: AACCGTACATGATTGGGTCAATACGGTTACTACTTT...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAACCATGGTCCACTGTaGCTGGTTGGTAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: VPALASEWPGRYTHLYRPNHGPL*LVGRNL
Trigger: GAGGTTTCTACCAACCAGCAACAGTGGACCATGGTT...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCTTGGGGGAGCGTGAGTaGGAGCCTGGGCTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPLGERE*EPGLEG
Trigger: ACCCTCCAGCCCAGGCTCCAACTCACGCTCCCCCAA...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GTAACCGTATTGACCCAATCATGTACGGTTGTGCCAACTGAACCACAATCGCACTTGGGGGAGCGTGAGTaGGAGCCTGGGCTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: VTVLTQSCTVVPTEPQSHLGERE*EPGLEG
Trigger: ACCCTCCAGCCCAGGCTCCAACTCACGCTCCCCCAA...GTGCGATTGTGGTTCAGTTGGCACAACCGTACATGATTGGGTCAATACGGTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CAA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTTCTAGGGCCGAGGCTTaGCAGCGTATTCCTTTTCAG +
Preference number: 5 (lower is better)
Translates to: VATHLSLFPGDEVLALVCSRAEA*QRIPFQ
Trigger: CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGA...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCTCCCATCATCAGCACTaGCTTTTAGCTTCAAGTGTT +
Preference number: 5 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPSHHQH*LLASSV
Trigger: AACACTTGAAGCTAAAAGCAAGTGCTGATGATGGGA...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGTGACCATGGCGCCCTaGTGTCCTTTCCATTGGTTA +
Preference number: 5 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIVTMAP*CPFHWL
Trigger: TAACCAATGGAAAGGACACAAGGGCGCCATGGTCAC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCCTCCTGCCGGGGCTGTaGTCAGGAAAAATATGCAGA +
Preference number: 5 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEILLPGL*SGKICR
Trigger: TCTGCATATTTTTCCTGACAACAGCCCCGGCAGGAG...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGCCCCTTCCGCGAGGTaGGAGCATTATGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQAPSAR*EHYARN
Trigger: GTTCCTGGCATAATGCTCCAACCTCGCGGAAGGGGC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCAAGGCTGGGAGGCTCTaGTTCTCTGGTGAATCCGGA +
Preference number: 5 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFKAGRL*FSGESG
Trigger: TCCGGATTCACCAGAGAACAAGAGCCTCCCAGCCTT...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCCTCCCCCTTTACAACTaGGGCTCCATACTTCATAGT +
Preference number: 5 (lower is better)
Translates to: VPALASEWPGRYTHLYRPLPLYN*GSILHS
Trigger: ACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGAG...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTACTGACTGCCAGGACTaGCAGGAGACTTTAGTTCTG +
Preference number: 5 (lower is better)
Translates to: VATHLSLFPGDEVLALVCTDCQD*QETLVL
Trigger: CAGAACTAAAGTCTCCTGCAAGTCCTGGCAGTCAGT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGACCTCATTTGCTGTGTaGTGTGTCCCAACGATACGG +
Preference number: 5 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQTSFAV*CVPTIR
Trigger: CCGTATCGTTGGGACACACAACACAGCAAATGAGGT...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTACCTCATTTGCTGTGTaGTGTGTCCCAACGATACGG +
Preference number: 5 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPTSFAV*CVPTIR
Trigger: CCGTATCGTTGGGACACACAACACAGCAAATGAGGT...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTTTTGCTTGTGTGCATTaGTGGCACTTCCTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: VATHLSLFPGDEVLALVCFACVH*WHFLCG
Trigger: GCCACAGAGGAAGTGCCACAAATGCACACAAGCAAA...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTCAAATGAGGTCCTTTaGATGAGGATTAGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGESNEVL*MRIRRK
Trigger: TTTTCTCCTAATCCTCATCAAAAGGACCTCATTTGA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCTCATTTCAAAATGTTaGAACTCTGCCCTTGATATG +
Preference number: 5 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPLISKC*NSALDM
Trigger: CATATCAAGGGCAGAGTTCAAACATTTTGAAATGAG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGTGACACACCTTGACTaGGCCTCCAGGCCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPVTHLD*ASRPSW
Trigger: CCAGCTGGGCCTGGAGGCCAAGTCAAGGTGTGTCAC...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACATGGGGGCATTCCAGTaGTCCTGCATGCCATTTAAA +
Preference number: 5 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHMGAFQ*SCMPFK
Trigger: TTTAAATGGCATGCAGGACAACTGGAATGCCCCCAT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTTTTCGAACACACGGTTaGTACATCTGCCCGCTTAGG +
Preference number: 5 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPFRTHG*YICPLR
Trigger: CCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAA...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTTCTGCAGTGGTGTCTaGGAGAGGAATTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIFCSGV*ERNFCF
Trigger: GAAGCAGAAATTCCTCTCCAAGACACCACTGCAGAA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTTTCTGCAGTGGTGTCTaGGAGAGGAATTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPFCSGV*ERNFCF
Trigger: GAAGCAGAAATTCCTCTCCAAGACACCACTGCAGAA...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTCCCAATCATGTACGGTaGTGCCAACTGAACCACAAT +
Preference number: 5 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPPNHVR*CQLNHN
Trigger: ATTGTGGTTCAGTTGGCACAACCGTACATGATTGGG...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp ACACTGGCACAATCAGCAATTGTTGCAACATTCTCCATGGGAACTATCAGCCCCTATTGGTGCTGCCGGTaGGGGGAGCGTGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: TLAQSAIVATFSMGTISPYWCCR*GERELE
Trigger: CTCCAACTCACGCTCCCCCAACCGGCAGCACCAATA...GGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CAA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGTTTGCGTGCCATTTTaGTATTCCAACACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: VATHLSLFPGDEVLALVCVCVPF*YSNTGL
Trigger: CAGGCCTGTGTTGGAATACAAAAATGGCACGCAAAC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGTCAAATGAGGTCCTTTaGATGAGGATTAGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: DGELQTLASPQERVHPAPSNEVL*MRIRRK
Trigger: TTTTCTCCTAATCCTCATCAAAAGGACCTCATTTGA...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGCAGCTGATATGTCTTaGACACACCTGAAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: VPALASEWPGRYTHLYRPAADMS*THLKGN
Trigger: GTTTCCTTTCAGGTGTGTCAAAGACATATCAGCTGC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAAAGCTCCAATGAAGTaGCCTTTCTACTCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: GSQQRPLLREETVSCRCPKAPMK*PFYSQK
Trigger: TTTTTGAGAGTAGAAAGGCAACTTCATTGGAGCTTT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACAATTTAAAGAGCAATaGAGAAGAGTCCCACATCCA +
Preference number: 5 (lower is better)
Translates to: QAAISFPEHRRALRALWAQFKEQ*RRVPHP
Trigger: TGGATGTGGGACTCTTCTCAATTGCTCTTTAAATTG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAATTTTCTTTTCCTCTTaGACACCTTTCTTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: QAAISFPEHRRALRALWAIFFSS*TPFFPV
Trigger: GACAGGGAAGAAAGGTGTCAAAGAGGAAAAGAAAAT...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATATGGGGGCATTCCAGTaGTCCTGCATGCCATTTAAA +
Preference number: 5 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNMGAFQ*SCMPFK
Trigger: TTTAAATGGCATGCAGGACAACTGGAATGCCCCCAT...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGAAGGCCTGGAGAGCCTaGGGGAGAGATCAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMKAWRA*GRDQAP
Trigger: TGGGGCCTGATCTCTCCCCAAGGCTCTCCAGGCCTT...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCTCGCAAAAGCAGCTCTaGGGCCGAGCTCCAGGCCTA +
Preference number: 5 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPSQKQL*GRAPGL
Trigger: TAGGCCTGGAGCTCGGCCCAAGAGCTGCTTTTGCGA...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCTTTCGAACACACGGTTaGTACATCTGCCCGCTTAGG +
Preference number: 5 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCFRTHG*YICPLR
Trigger: CCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAA...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS TCA 90 bp TCGCACTTTAATGGCATCCAGGATGGCATCAGGAGACAGCAGTCCTaGAGGCCTCACAACATTCAGAAGCTCTGTGAGGCTCATGAGAGG +
Preference number: 5 (lower is better)
Translates to: SHFNGIQDGIRRQQS*RPHNIQKLCEAHER
Trigger: CCTCTCATGAGCCTCACAGAGCTTCTGAATGTTGTGAGGCCTTCAGGACTGCTGTCTCCTGATGCCATCCTGGATGCCATTAAAGTGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314100.10
ENST00000328403.10
ENST00000403056.2
ENST00000408958.5
ENST00000419706.6
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTGGCAGTCATCATCAATaGGGTGCCTTGAAAATCCAT +
Preference number: 5 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPGSHHQ*GALKIH
Trigger: ATGGATTTTCAAGGCACCCAATTGATGATGACTGCC...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGTTTGCGTGCCATTTTaGTATTCCAACACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCVCVPF*YSNTGL
Trigger: CAGGCCTGTGTTGGAATACAAAAATGGCACGCAAAC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCCACAGGTTGATTTGCTaGTGTGCATTTGTGGCACTT +
Preference number: 5 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIHRLIC*CAFVAL
Trigger: AAGTGCCACAAATGCACACAAGCAAATCAACCTGTG...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCTTGTGTCCTTTCCATaGGTTACTGAGGACCATTGC +
Preference number: 5 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCLVSFP*VTEDHC
Trigger: GCAATGGTCCTCAGTAACCAATGGAAAGGACACAAG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTCATCTGCACAGCAGTTaGACAACTGGGGCGACAGCA +
Preference number: 5 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFHLHSS*TTGATA
Trigger: TGCTGTCGCCCCAGTTGTCAAACTGCTGTGCAGATG...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAACTCCTGCCGGGGCTGTaGTCAGGAAAAATATGCAGA +
Preference number: 5 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKLLPGL*SGKICR
Trigger: TCTGCATATTTTTCCTGACAACAGCCCCGGCAGGAG...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS TCA 90 bp ATTTCCATCAACTCTCCTGTCCCTTTGGAGCTGCAATGGCCACAGTaGTGGCCACTTGCCACATGTGGCTACCGAGCACTTGAAATACAG +
Preference number: 5 (lower is better)
Translates to: ISINSPVPLELQWPQ*WPLATCGYRALEIQ
Trigger: CTGTATTTCAAGTGCTCGGTAGCCACATGTGGCAAGTGGCCATCACTGTGGCCATTGCAGCTCCAAAGGGACAGGAGAGTTGATGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498633.1
ENST00000649492.1
CDS-3UTR CAA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTTTTTCAGTCCCCAGTaGAGTACTGTGGTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSFFSPQ*STVVWG
Trigger: CCCCCACACCACAGTACTCAACTGGGGACTGAAAAA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCACGCCCTCACCCTCCTTaGATCAGGGTTGCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSRPHPP*IRVAGW
Trigger: CCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCG...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGCAGCTGATATGTCTTaGACACACCTGAAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEAADMS*THLKGN
Trigger: GTTTCCTTTCAGGTGTGTCAAAGACATATCAGCTGC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTGCCCCTTCCGCGAGGTaGGAGCATTATGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASAPSAR*EHYARN
Trigger: GTTCCTGGCATAATGCTCCAACCTCGCGGAAGGGGC...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp ATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAAGGAGGCAGGCTGCCTTTCAGAGGAAACCTTCACTaGAGAGGACTTCCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: ICCVVCPNDTDEGGRLPFRGNLH*RGLPEH
Trigger: ATGCTCAGGAAGTCCTCTCAAGTGAAGGTTTCCTCT...GAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGACACACAACACAGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CAA 90 bp ATTTTCCTCCTTCTGGCTGCTCTGCTGCTCTGGACACTCAAAGTGGACACAGTGCTCCCCCTTTACAACTaGGGCTCCATACTTCATAGT +
Preference number: 5 (lower is better)
Translates to: IFLLLAALLLWTLKVDTVLPLYN*GSILHS
Trigger: ACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGAG...CACTGTGTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CAA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCACAATCAGCAATTGTaGCAACATTCTCCATGGGAA +
Preference number: 5 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCHNQQL*QHSPWE
Trigger: TTCCCATGGAGAATGTTGCAACAATTGCTGATTGTG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTAAAGTAGTAACCGTATaGACCCAATCATGTACGGTT +
Preference number: 5 (lower is better)
Translates to: VATHLSLFPGDEVLALVCKVVTV*TQSCTV
Trigger: AACCGTACATGATTGGGTCAATACGGTTACTACTTT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTTTTGCTTGTGTGCATTaGTGGCACTTCCTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFFACVH*WHFLCG
Trigger: GCCACAGAGGAAGTGCCACAAATGCACACAAGCAAA...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCCTCATTTCAAAATGTTaGAACTCTGCCCTTGATATG +
Preference number: 5 (lower is better)
Translates to: VPALASEWPGRYTHLYRPLISKC*NSALDM
Trigger: CATATCAAGGGCAGAGTTCAAACATTTTGAAATGAG...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTTCTGCAGTGGTGTCTaGGAGAGGAATTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSFCSGV*ERNFCF
Trigger: GAAGCAGAAATTCCTCTCCAAGACACCACTGCAGAA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAATGGCACAATCAGCAATaGTTGCAACATTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKWHNQQ*LQHSPW
Trigger: CCATGGAGAATGTTGCAACAATTGCTGATTGTGCCA...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GCATTTCGGCTCCGACTGACTCCTTCAATCACACTGGCACAATCAGCAATTGTTAACCATGGTCCACTGTaGCTGGTTGGTAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: AFRLRLTPSITLAQSAIVNHGPL*LVGRNL
Trigger: GAGGTTTCTACCAACCAGCAACAGTGGACCATGGTT...AACAATTGCTGATTGTGCCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CAA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCTTTGCTTGTGTGCATTaGTGGCACTTCCTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPFACVH*WHFLCG
Trigger: GCCACAGAGGAAGTGCCACAAATGCACACAAGCAAA...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAGCAGCTGATATGTCTTaGACACACCTGAAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPAADMS*THLKGN
Trigger: GTTTCCTTTCAGGTGTGTCAAAGACATATCAGCTGC...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCCTCATTTCAAAATGTTaGAACTCTGCCCTTGATATG +
Preference number: 5 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEILISKC*NSALDM
Trigger: CATATCAAGGGCAGAGTTCAAACATTTTGAAATGAG...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCATTTTCTTTTCCTCTTaGACACCTTTCTTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFIFFSS*TPFFPV
Trigger: GACAGGGAAGAAAGGTGTCAAAGAGGAAAAGAAAAT...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCTTCTTCCCTTTCAATaGCCTTATCTGCTGATTTTC +
Preference number: 5 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFLLPFQ*PYLLIF
Trigger: GAAAATCAGCAGATAAGGCAATTGAAAGGGAAGAAG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649492.1
CDS-3UTR CAA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTGGCACAATCAGCAATaGTTGCAACATTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSWHNQQ*LQHSPW
Trigger: CCATGGAGAATGTTGCAACAATTGCTGATTGTGCCA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGCCTGATTTGGATAAATaGAGAAGAACAAAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQPDLDK*RRTKQP
Trigger: GGGCTGCTTTGTTCTTCTCAATTTATCCAAATCAGG...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGCCTCCGCCTGAGTGTTaGCGTGCCATTTTTGTATTC +
Preference number: 5 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMPPPEC*RAIFVF
Trigger: GAATACAAAAATGGCACGCAAACACTCAGGCGGAGG...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCATCCCATCATCAGCACTaGCTTTTAGCTTCAAGTGTT +
Preference number: 5 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPSHHQH*LLASSV
Trigger: AACACTTGAAGCTAAAAGCAAGTGCTGATGATGGGA...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTGTGGTGGGGAGCAATTaGGCAGCAGACGGACTAATA +
Preference number: 5 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASVVGSN*AADGLI
Trigger: TATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCAC...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGCATCAATTGGGTGCCTaGAAAATCCATGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQHQLGA*KIHDPN
Trigger: ATTTGGATCATGGATTTTCAAGGCACCCAATTGATG...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp ATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAAGGAGGCAGGCTGCCTTTCCATCAATTGGGTGCCTaGAAAATCCATGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: ICCVVCPNDTDEGGRLPFHQLGA*KIHDPN
Trigger: ATTTGGATCATGGATTTTCAAGGCACCCAATTGATG...GAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGACACACAACACAGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CAA 90 bp ACACTGGCACAATCAGCAATTGTTGCAACATTCTCCATGGGAACTATCAGCCCCGGCAGTCATCATCAATaGGGTGCCTTGAAAATCCAT +
Preference number: 5 (lower is better)
Translates to: TLAQSAIVATFSMGTISPGSHHQ*GALKIH
Trigger: ATGGATTTTCAAGGCACCCAATTGATGATGACTGCC...GGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CAA 90 bp CAGGAGACTTTAGTTCTGTCAGCAACCATGGTCCACTGTTGCTGGTTGGTAGAATGGCACAATCAGCAATaGTTGCAACATTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: QETLVLSATMVHCCWLVEWHNQQ*LQHSPW
Trigger: CCATGGAGAATGTTGCAACAATTGCTGATTGTGCCA...TTCTACCAACCAGCAACAGTGGACCATGGTTGCTGACAGAACTAAAGTCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CAA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTAACCATGGTCCACTGTaGCTGGTTGGTAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASNHGPL*LVGRNL
Trigger: GAGGTTTCTACCAACCAGCAACAGTGGACCATGGTT...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTTCCCATCATCAGCACTaGCTTTTAGCTTCAAGTGTT +
Preference number: 5 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFSHHQH*LLASSV
Trigger: AACACTTGAAGCTAAAAGCAAGTGCTGATGATGGGA...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS TCA 90 bp AGATACTCAGAGGTAGAATCCTCTAGCTCTGGAAATCCATATTTATaGGCCAGGCTCAAAAAGTCCAGCAGCACCTCCTCCTTCTCATCT +
Preference number: 5 (lower is better)
Translates to: RYSEVESSSSGNPYL*ARLKKSSSTSSFSS
Trigger: AGATGAGAAGGAGGAGGTGCTGCTGGACTTTTTGAGCCTGGCTCATAAATATGGATTTCCAGAGCTAGAGGATTCTACCTCTGAGTATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314100.10
ENST00000328403.10
ENST00000403056.2
ENST00000408958.5
ENST00000419706.6
ENST00000481247.6
ENST00000497373.1
ENST00000649492.1
CDS-3UTR CAA 90 bp GACACAGTGGAACACCTCATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAACACAATCAGCAATTGTaGCAACATTCTCCATGGGAA +
Preference number: 5 (lower is better)
Translates to: DTVEHLICCVVCPNDTDEHNQQL*QHSPWE
Trigger: TTCCCATGGAGAATGTTGCAACAATTGCTGATTGTG...TTCATCCGTATCGTTGGGACACACAACACAGCAAATGAGGTGTTCCACTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CAA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGTTTGCGTGCCATTTTaGTATTCCAACACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSVCVPF*YSNTGL
Trigger: CAGGCCTGTGTTGGAATACAAAAATGGCACGCAAAC...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCCCTCCGCCTGAGTGTTaGCGTGCCATTTTTGTATTC +
Preference number: 5 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFPPPEC*RAIFVF
Trigger: GAATACAAAAATGGCACGCAAACACTCAGGCGGAGG...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCACTTGTGTCCTTTCCATaGGTTACTGAGGACCATTGC +
Preference number: 5 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSLVSFP*VTEDHC
Trigger: GCAATGGTCCTCAGTAACCAATGGAAAGGACACAAG...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CAA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTCAATTTAAAGAGCAATaGAGAAGAGTCCCACATCCA +
Preference number: 5 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFQFKEQ*RRVPHP
Trigger: TGGATGTGGGACTCTTCTCAATTGCTCTTTAAATTG...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAAAAAAGAAGGTGAAGTaGACTGGGCTGGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSKKKVK*TGLEPS
Trigger: AGATGGCTCCAGCCCAGTCAACTTCACCTTCTTTTT...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCCCTTCCTTTTCCCCCTaGGCTCTGGAAAGGATAAGT +
Preference number: 5 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFPSFSP*ALERIS
Trigger: ACTTATCCTTTCCAGAGCCAAGGGGGAAAAGGAAGG...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp ACACTGGCACAATCAGCAATTGTTGCAACATTCTCCATGGGAACTATCAGCCCCAAAGTAGTAACCGTATaGACCCAATCATGTACGGTT +
Preference number: 5 (lower is better)
Translates to: TLAQSAIVATFSMGTISPKVVTV*TQSCTV
Trigger: AACCGTACATGATTGGGTCAATACGGTTACTACTTT...GGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CAA 90 bp ATTCGAATATACCTTTTGAGGACTTTGCACTGTCACTGTCAGTTAGATCCCTCTACTGACTGCCAGGACTaGCAGGAGACTTTAGTTCTG +
Preference number: 5 (lower is better)
Translates to: IRIYLLRTLHCHCQLDPSTDCQD*QETLVL
Trigger: CAGAACTAAAGTCTCCTGCAAGTCCTGGCAGTCAGT...AGAGGGATCTAACTGACAGTGACAGTGCAAAGTCCTCAAAAGGTATATTCGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CAA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTAAAGCTCCAATGAAGTaGCCTTTCTACTCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFKAPMK*PFYSQK
Trigger: TTTTTGAGAGTAGAAAGGCAACTTCATTGGAGCTTT...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CAA 90 bp AATTCGAATATACCTTTTGAGGACTTTGCACTGTCACTGTCAGTTAGATCCCTCTTCTGCAGTGGTGTCTaGGAGAGGAATTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: NSNIPFEDFALSLSVRSLFCSGV*ERNFCF
Trigger: GAAGCAGAAATTCCTCTCCAAGACACCACTGCAGAA...GAGGGATCTAACTGACAGTGACAGTGCAAAGTCCTCAAAAGGTATATTCGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CAA 90 bp AATTCGAATATACCTTTTGAGGACTTTGCACTGTCACTGTCAGTTAGATCCCTCCCCAATCATGTACGGTaGTGCCAACTGAACCACAAT +
Preference number: 5 (lower is better)
Translates to: NSNIPFEDFALSLSVRSLPNHVR*CQLNHN
Trigger: ATTGTGGTTCAGTTGGCACAACCGTACATGATTGGG...GAGGGATCTAACTGACAGTGACAGTGCAAAGTCCTCAAAAGGTATATTCGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS CCA 90 bp GTATCACCATCTAATAAGGCTGATTTCAGCTCCCCCTTTACAACTTaGGCTCCATACTTCATAGTTGCAATGTTTTCTTCTGGTATGAGC +
Preference number: 5 (lower is better)
Translates to: VSPSNKADFSSPFTT*APYFIVAMFSSGMS
Trigger: GCTCATACCAGAAGAAAACATTGCAACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGAGCTGAAATCAGCCTTATTAGATGGTGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314100.10
ENST00000328403.10
ENST00000403056.2
ENST00000408958.5
ENST00000419706.6
ENST00000481247.6
ENST00000649492.1
CDS TCA 90 bp GCTGGAAAATATAATTTCTGCCAAGAACGACACAGATATTGTGAATaGTCTATCACTCTGACCCAATCAAGTTCATCCATTGACACTTCA +
Preference number: 5 (lower is better)
Translates to: AGKYNFCQERHRYCE*SITLTQSSSSIDTS
Trigger: TGAAGTGTCAATGGATGAACTTGATTGGGTCAGAGTGATAGATCATTCACAATATCTGTGTCGTTCTTGGCAGAAATTATATTTTCCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314100.10
ENST00000328403.10
ENST00000403056.2
ENST00000408958.5
ENST00000419706.6
ENST00000481247.6
ENST00000649492.1
CDS CCA 72 bp GCACTCCGCCGTGGCCGCGCACGCGCCACTGCGCGCTaGCGTCACTTAGCAACCGATCGACAGCGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: ALRRGRARATAR*RHLATDRQRAA
Trigger: AGCAGCCCGCTGTCGATCGGTTGCTAAGTGACGCCAGCGCGCAGTGGCGCGTGCGCGGCCACGGCGGAGTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497373.1
CDS GCA 72 bp CTTTCACGCACTCCGCCGTGGCCGCGCACGCGCCACTaGGCGCTGGCGTCACTTAGCAACCGATCGACAGCG +
Preference number: 6 (lower is better)
Translates to: LSRTPPWPRTRH*ALASLSNRSTA
Trigger: CGCTGTCGATCGGTTGCTAAGTGACGCCAGCGCGCAGTGGCGCGTGCGCGGCCACGGCGGAGTGCGTGAAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497373.1
CDS GCA 72 bp CCGTTGCCCGAGCCCACCAAGTCACACCAGGCCCGCTaGCTCCTTTATTGGTGCTGCCGGTTGGGGGAGCGT +
Preference number: 6 (lower is better)
Translates to: PLPEPTKSHQAR*LLYWCCRLGER
Trigger: ACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCGGGCCTGGTGTGACTTGGTGGGCTCGGGCAACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS GCA 72 bp AGCAACCGATCGACAGCGGGCTGCTGGGTCCGGCGATaGAGGCCCAGAAAGTCGCCTAAGGCAGCTTCCGCG +
Preference number: 6 (lower is better)
Translates to: SNRSTAGCWVRR*RPRKSPKAASA
Trigger: CGCGGAAGCTGCCTTAGGCGACTTTCTGGGCCTGCATCGCCGGACCCAGCAGCCCGCTGTCGATCGGTTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497373.1
CDS GCA 72 bp GCGCTGGCGTCACTTAGCAACCGATCGACAGCGGGCTaGTGGGTCCGGCGATGCAGGCCCAGAAAGTCGCCT +
Preference number: 6 (lower is better)
Translates to: ALASLSNRSTAG*WVRRCRPRKSP
Trigger: AGGCGACTTTCTGGGCCTGCATCGCCGGACCCAGCAGCCCGCTGTCGATCGGTTGCTAAGTGACGCCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497373.1
CDS GCA 72 bp GTCGTTGTTCCCAGCGATGCTCCTCTGAGACCAAGCTaGGACACAGACGCCTCTTCCGCCCGCTCCGCACCC +
Preference number: 6 (lower is better)
Translates to: VVVPSDAPLRPS*DTDASSARSAP
Trigger: GGGTGCGGAGCGGGCGGAAGAGGCGTCTGTGTCGCAGCTTGGTCTCAGAGGAGCATCGCTGGGAACAACGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481247.6
CDS CCA 72 bp CTGGCGTCACTTAGCAACCGATCGACAGCGGGCTGCTaGGTCCGGCGATGCAGGCCCAGAAAGTCGCCTAAG +
Preference number: 6 (lower is better)
Translates to: LASLSNRSTAGC*VRRCRPRKSPK
Trigger: CTTAGGCGACTTTCTGGGCCTGCATCGCCGGACCCAGCAGCCCGCTGTCGATCGGTTGCTAAGTGACGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497373.1
CDS CAA 90 bp CAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTaGCCCGAGCCCACCAAGTCACACCAGGCCCGCTGCCTCCTTTAT +
Preference number: 6 (lower is better)
Translates to: QSTETPAQGGDRFLP*PEPTKSHQARCLLY
Trigger: ATAAAGGAGGCAGCGGGCCTGGTGTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS TCA 72 bp CAGGGCCAAATTGAGACGAGCCCAGCGATGCTCCTCTaGGACCAAGCTGCGACACAGACGCCTCTTCCGCCC +
Preference number: 6 (lower is better)
Translates to: QGQIETSPAMLL*DQAATQTPLPP
Trigger: GGGCGGAAGAGGCGTCTGTGTCGCAGCTTGGTCTCAGAGGAGCATCGCTGGGCTCGTCTCAATTTGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498633.1
ENST00000649492.1
CDS TCA 72 bp AACTCTCCTGTCCCTTTGGAGCTGCAATGGCCACAGTaGTGGCCACTTGCCACATGTGGCTACCGAGCACTT +
Preference number: 6 (lower is better)
Translates to: NSPVPLELQWPQ*WPLATCGYRAL
Trigger: AAGTGCTCGGTAGCCACATGTGGCAAGTGGCCATCACTGTGGCCATTGCAGCTCCAAAGGGACAGGAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498633.1
ENST00000649492.1
CDS TCA 72 bp GAGGTAGAATCCTCTAGCTCTGGAAATCCATATTTATaGGCCAGGCTCAAAAAGTCCAGCAGCACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: EVESSSSGNPYL*ARLKKSSSTSS
Trigger: GGAGGAGGTGCTGCTGGACTTTTTGAGCCTGGCTCATAAATATGGATTTCCAGAGCTAGAGGATTCTACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314100.10
ENST00000328403.10
ENST00000403056.2
ENST00000408958.5
ENST00000419706.6
ENST00000481247.6
ENST00000497373.1
ENST00000649492.1
CDS TCA 72 bp AACAAGGCACCAATATGTTCAGACAAAATGTGCACATaGTCAATTTCCCCCACCCAGCGATGCTCCTCTGAG +
Preference number: 6 (lower is better)
Translates to: NKAPICSDKMCT*SISPTQRCSSE
Trigger: CTCAGAGGAGCATCGCTGGGTGGGGGAAATTGATCATGTGCACATTTTGTCTGAACATATTGGTGCCTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497373.1
CDS TCA 72 bp GAAAGGGAGAGGAAACCTTCACTTGAGAGGACTTCCTaGGCATTCCTATCCATAAACATGCAGCACATACAA +
Preference number: 6 (lower is better)
Translates to: ERERKPSLERTS*AFLSINMQHIQ
Trigger: TTGTATGTGCTGCATGTTTATGGATAGGAATGCTCAGGAAGTCCTCTCAAGTGAAGGTTTCCTCTCCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314100.10
ENST00000328403.10
ENST00000403056.2
ENST00000408958.5
ENST00000419706.6
ENST00000481247.6
ENST00000497373.1
ENST00000649492.1
CDS TCA 72 bp ATTTTCAGCAAACCAAGGTTTGCTCTCTTGGGCTCATaGGGCTGTAGAATGCAGTGTCTAATTTCCATCAAC +
Preference number: 6 (lower is better)
Translates to: IFSKPRFALLGS*GCRMQCLISIN
Trigger: GTTGATGGAAATTAGACACTGCATTCTACAGCCTCATGAGCCCAAGAGAGCAAACCTTGGTTTGCTGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498633.1
ENST00000649492.1
CDS TCA 72 bp TCGTTGTTCTTCTTCCCTTTCAATTGCCTTATCTGCTaGTTTTCAGCAAACCAAGGTTTGCTCTCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: SLFFFPFNCLIC*FSANQGLLSWA
Trigger: AGCCCAAGAGAGCAAACCTTGGTTTGCTGAAAATCAGCAGATAAGGCAATTGAAAGGGAAGAAGAACAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498633.1
ENST00000649492.1
CDS GCA 72 bp ATCCCTCTTCTCCTGTATCATAGATCTCTCATAAACTaGAGACACGGGCTGGAAAATATAATTTCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: IPLLLYHRSLIN*RHGLENIISAK
Trigger: CTTGGCAGAAATTATATTTTCCAGCCCGTGTCTGCAGTTTATGAGAGATCTATGATACAGGAGAAGAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS GCA 72 bp CCTCAAATAGGATTTGCTCTTCACTGGGTTATACTCTaGCTAAAAGTACCCCTGAAGGTTTCCATTAATCCA +
Preference number: 6 (lower is better)
Translates to: PQIGFALHWVIL*LKVPLKVSINP
Trigger: TGGATTAATGGAAACCTTCAGGGGTACTTTTAGGCAGAGTATAACCCAGTGAAGAGCAAATCCTATTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419706.6
CDS CCA 72 bp TCTAATAAGGCTGATTTCAGCTCCCCCTTTACAACTTaGGCTCCATACTTCATAGTTGCAATGTTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: SNKADFSSPFTT*APYFIVAMFSS
Trigger: AGAAGAAAACATTGCAACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGAGCTGAAATCAGCCTTATTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314100.10
ENST00000328403.10
ENST00000403056.2
ENST00000408958.5
ENST00000419706.6
ENST00000481247.6
ENST00000649492.1
CDS TCA 72 bp TATAATTTCTGCCAAGAACGACACAGATATTGTGAATaGTCTATCACTCTGACCCAATCAAGTTCATCCATT +
Preference number: 6 (lower is better)
Translates to: YNFCQERHRYCE*SITLTQSSSSI
Trigger: AATGGATGAACTTGATTGGGTCAGAGTGATAGATCATTCACAATATCTGTGTCGTTCTTGGCAGAAATTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314100.10
ENST00000328403.10
ENST00000403056.2
ENST00000408958.5
ENST00000419706.6
ENST00000481247.6
ENST00000649492.1