RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BTBD9 (Homo sapiens)

Ensembl gene IDs: ENSG00000183826

Ensembl transcript IDs: ENST00000314100.10, ENST00000328403.10, ENST00000403056.2, ENST00000408958.5, ENST00000419706.6, ENST00000481247.6, ENST00000497373.1, ENST00000498633.1, ENST00000649492.1

Found 1317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTaGCGTTGCCCGAGCCCACCAAGTCACACCAGGCCCGCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: GGSQQRPLLREETVS*RCPSPPSHTRPAAS
Trigger: GGAGGCAGCGGGCCTGGTGTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp AACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTaGCCTGCCCGGGCCGTGCCCGACCTGGGCATCGCTCGGAGGAGC +
Preference number: 1 (lower is better)
Translates to: NKWSMPTSATASLQT*PARAVPDLGIARRS
Trigger: GCTCCTCCGAGCGATGCCCAGGTCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 90 bp AGCAGCTCAGCCCTGCAGCTGGAGCTACCGGGGAGGATGGAGAGCTaGAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGG +
Preference number: 1 (lower is better)
Translates to: SSSALQLELPGRMES*RPWLLLRNVSTLPR
Trigger: CCGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCTCCAGCTGCAGGGCTGAGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTaGAGACCTGCCCTGCCCGGGCCGTGCCCGACCTGGGCATCGCTC +
Preference number: 1 (lower is better)
Translates to: AAKTNGVCPPLPRHR*RPALPGPCPTWASL
Trigger: GAGCGATGCCCAGGTCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp CCACCAGGGCAGCACCAGGAGGCAAAGGCCCTGAGGGAGATGAGCTaGTGCCGTCCCCTCCCAATTCCGCTCAGATGGGCACCCTCGCCT +
Preference number: 1 (lower is better)
Translates to: PPGQHQEAKALREMS*CRPLPIPLRWAPSP
Trigger: AGGCGAGGGTGCCCATCTGAGCGGAATTGGGAGGGGACGGCACCAGCTCATCTCCCTCAGGGCCTTTGCCTCCTGGTGCTGCCCTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 90 bp CTGGAAGGCCGTGGGGCTTGGGGCCAGCACTGTGCAAAGGATGGGTaGGCACGCTGTCCCTCGGAGCGTCCTCAGTGGTGCAGCCAAGAG +
Preference number: 1 (lower is better)
Translates to: LEGRGAWGQHCAKDG*ARCPSERPQWCSQE
Trigger: CTCTTGGCTGCACCACTGAGGACGCTCCGAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGCTGGCCCCAAGCCCCACGGCCTTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp CCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTaGGGAGACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGC +
Preference number: 1 (lower is better)
Translates to: PKTQGLQCCSRAMPS*GDSQADADGDRGRS
Trigger: GCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp CTAGCTGGAAGGCCGTGGGGCTTGGGGCCAGCACTGTGCAAAGGATaGGTGAGCACGCTGTCCCTCGGAGCGTCCTCAGTGGTGCAGCCA +
Preference number: 1 (lower is better)
Translates to: LAGRPWGLGPALCKG*VSTLSLGASSVVQP
Trigger: TGGCTGCACCACTGAGGACGCTCCGAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGCTGGCCCCAAGCCCCACGGCCTTCCAGCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp CACGAAGCTGATGGGGCAGGAGGGCCGTTCAGCCTGGCTTCTGACTaGAAGCTCGCTGGGTGCAGCAGACTGGCCTGGGAGATGCCAGGG +
Preference number: 1 (lower is better)
Translates to: HEADGAGGPFSLASD*KLAGCSRLAWEMPG
Trigger: CCCTGGCATCTCCCAGGCCAGTCTGCTGCACCCAGCGAGCTTCCAGTCAGAAGCCAGGCTGAACGGCCCTCCTGCCCCATCAGCTTCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp TGCGCCAGGGCCAGGGCCTCTCCCCCTAGTGGAGCGACTGTCCACTaGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGAC +
Preference number: 1 (lower is better)
Translates to: CARARASPPSGATVH*LSKAALLSCHSRSD
Trigger: GTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGGCCCTGGCCCTGGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 90 bp GGTTGGCGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATaGCGTCCTGGGGAGACTCCCAGGCTGATGCTGATGGCGACAGAG +
Preference number: 1 (lower is better)
Translates to: GWRRRPKDCSAAHVP*RPGETPRLMLMATE
Trigger: CTCTGTCGCCATCAGCATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTGCAGTGCTaGTCACGTGCCATGCCGTCCTGGGGAGACTCCCAGGCTGATGCT +
Preference number: 1 (lower is better)
Translates to: DQGCRLAPKTQGLQC*SRAMPSWGDSQADA
Trigger: AGCATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp CCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTaGAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGACTCCCAGG +
Preference number: 1 (lower is better)
Translates to: PPLIRVAGWRRRPKD*SAAHVPCRPGETPR
Trigger: CCTGGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp TTGGAGTCCAGGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTaGCAGCGCGGCTGTGAGGGAATGAGACTTTGCCATCAGTCCTCA +
Preference number: 1 (lower is better)
Translates to: LESRAGSQQSEGEAS*QRGCEGMRLCHQSS
Trigger: TGAGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCCTGGACTCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp CCTTACTGGCAGCACCCTGCCCTGCTGACCCTGGAAGCAGCTGATTaGGGGGCCTGGGAAGACCCCATGGCCTCCAGCAGGTCTCAGAAT +
Preference number: 1 (lower is better)
Translates to: PYWQHPALLTLEAAD*GAWEDPMASSRSQN
Trigger: ATTCTGAGACCTGCTGGAGGCCATGGGGTCTTCCCAGGCCCCTCAATCAGCTGCTTCCAGGGTCAGCAGGGCAGGGTGCTGCCAGTAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 90 bp AATCAATGGCTGCAGCTGCCAAAACAAATGGAGTATGCCCACCTCTaGCACGGCATCGCTGCAGACCTGCCCTGCCCGGGCCGTGCCCGA +
Preference number: 1 (lower is better)
Translates to: NQWLQLPKQMEYAHL*HGIAADLPCPGRAR
Trigger: TCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGCTGCAGCCATTGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 90 bp TCCTCCCTGATGGAAGCCAGAGACCTACCACAAACAAAGACCTGCTaGCTCCGCCCCTCCTCCCTCCGCCTCGCCTCTGCAACCGGTCTT +
Preference number: 1 (lower is better)
Translates to: SSLMEARDLPQTKTC*LRPSSLRLASATGL
Trigger: AAGACCGGTTGCAGAGGCGAGGCGGAGGGAGGAGGGGCGGAGGCAGCAGGTCTTTGTTTGTGGTAGGTCTCTGGCTTCCATCAGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 90 bp TTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTGCAGTaGTGCTCACGTGCCATGCCGTCCTGGGGAGACTCCCAGGCTGAT +
Preference number: 1 (lower is better)
Translates to: FDQGCRLAPKTQGLQ*CSRAMPSWGDSQAD
Trigger: ATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp TGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTaGCCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGA +
Preference number: 1 (lower is better)
Translates to: WRAADPGFSSGTCPP*PGSPLMSAILCSHG
Trigger: TCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGAGGCCGAGCTaGCAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGT +
Preference number: 1 (lower is better)
Translates to: GRGFAAYSFSDARPS*QAAISFPEHRRALR
Trigger: ACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp AGGAAACTCCCACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTaGCGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGC +
Preference number: 1 (lower is better)
Translates to: RKLPRPHPPLIRVAG*RRRPKDCSAAHVPC
Trigger: GCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGTGGGAGTTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp AGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTaGGGGAATGAGACTTTGCCATCAGTCCTCACCAATGACATCTAC +
Preference number: 1 (lower is better)
Translates to: RLPAKRGGGELAARL*GNETLPSVLTNDIY
Trigger: GTAGATGTCATTGGTGAGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GGAAGGGCATGCCCCGAAGGAAAGAACCGCCACAGGCCAGGGAGCTaGAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTT +
Preference number: 1 (lower is better)
Translates to: GRACPEGKNRHRPGS*RCGSRAEALQRIPF
Trigger: AAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCCTGGCCTGTGGCGGTTCTTTCCTTCGGGGCATGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GTCACAGAGCCATTCCCAACCCAGGCCTGGCATGGTCCCTGCCCTTaGATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAG +
Preference number: 1 (lower is better)
Translates to: VTEPFPTQAWHGPCP*IRVAWEVHTSLQAQ
Trigger: CTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTTGGGAATGGCTCTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp TTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGTGTCCTTTCCATTaGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCAC +
Preference number: 1 (lower is better)
Translates to: FAWVVVTMAPLCPFH*LLRTIALMGPGHRH
Trigger: GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGGACACAAGGGCGCCATGGTCACCACCACCCAGGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp CCAACCCAGGCCTGGCATGGTCCCTGCCCTTGCATCAGAGTGGCCTaGGAGGTACACACATCTTTACAGGCCCAGAAACGCCAAAGGCTG +
Preference number: 1 (lower is better)
Translates to: PTQAWHGPCPCIRVA*EVHTSLQAQKRQRL
Trigger: CAGCCTTTGGCGTTTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp TTAGACGGAGCTTCTGGAGTCACAGAGCCATTCCCAACCCAGGCCTaGCATGGTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACAC +
Preference number: 1 (lower is better)
Translates to: LDGASGVTEPFPTQA*HGPCPCIRVAWEVH
Trigger: GTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTTGGGAATGGCTCTGTGACTCCAGAAGCTCCGTCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 90 bp TGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGGTGTaGCACACCTTGACTTGGCCTCCAGGCCCAGCTGGACACACGAAA +
Preference number: 1 (lower is better)
Translates to: CPCSLEMRSLPWCVV*HTLTWPPGPAGHTK
Trigger: TTTCGTGTGTCCAGCTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp GGTGCAGCCAAGAGCCAGGAAGGGCACAGCCTCTTTCCTCCTCCCTaGTGGAAGCCAGAGACCTACCACAAACAAAGACCTGCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: GAAKSQEGHSLFPPP*WKPETYHKQRPAAS
Trigger: GGAGGCAGCAGGTCTTTGTTTGTGGTAGGTCTCTGGCTTCCATCAGGGAGGAGGAAAGAGGCTGTGCCCTTCCTGGCTCTTGGCTGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 90 bp GCGGGCGCCCACCGTTCCTTACAGGAGCCTCCTCCCATTATGAAATaGCTGGCATCCCAGGAGTGTTCCACTCTCCCACACAACAGGGAA +
Preference number: 1 (lower is better)
Translates to: AGAHRSLQEPPPIMK*LASQECSTLPHNRE
Trigger: TTCCCTGTTGTGTGGGAGAGTGGAACACTCCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCTCCTGTAAGGAACGGTGGGCGCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp CTTTGCAGCGTATTCCTTTTCAGATGCGAGGCCGAGCTGCCAAGCTaGTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTG +
Preference number: 1 (lower is better)
Translates to: LCSVFLFRCEAELPS*YLVPGAQEGSACSV
Trigger: CACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATACGCTGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATaGGAGGCCGAGCTGCCAAGCTGCTATCTCGTTCCCGGAGCACAG +
Preference number: 1 (lower is better)
Translates to: DVGLGPRLCSVFLFR*EAELPSCYLVPGAQ
Trigger: CTGTGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGGAATGAGACTTTaGCATCAGTCCTCACCAATGACATCTACTGTTAGTGCCACCCCA +
Preference number: 1 (lower is better)
Translates to: EGEASWQRGCEGMRL*HQSSPMTSTVSATP
Trigger: TGGGGTGGCACTAACAGTAGATGTCATTGGTGAGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp GAAGCACGGAGTCCCAGTTCTGCGTTCCTGACGCTGATGGGCAGGTaGCTGCCTCTCCAATGCTTCGATAAACACAACTGGAGGGGCAGC +
Preference number: 1 (lower is better)
Translates to: EARSPSSAFLTLMGR*LPLQCFDKHNWRGS
Trigger: GCTGCCCCTCCAGTTGTGTTTATCGAAGCATTGGAGAGGCAGCCACCTGCCCATCAGCGTCAGGAACGCAGAACTGGGACTCCGTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp GCAAATGACCAGGGCCTCCAAATCCCGTCCAGCCCCAGGTATGACTaGATCCGTGTCAGCGAGAGAGATGGGGGCATTCCAGTTGTCCTG +
Preference number: 1 (lower is better)
Translates to: ANDQGLQIPSSPRYD*IRVSERDGGIPVVL
Trigger: CAGGACAACTGGAATGCCCCCATCTCTCTCGCTGACACGGATCCAGTCATACCTGGGGCTGGACGGGATTTGGAGGCCCTGGTCATTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 90 bp TGTGAGCGGGCGCCCACCGTTCCTTACAGGAGCCTCCTCCCATTATaGAATGCCTGGCATCCCAGGAGTGTTCCACTCTCCCACACAACA +
Preference number: 1 (lower is better)
Translates to: CERAPTVPYRSLLPL*NAWHPRSVPLSHTT
Trigger: TGTTGTGTGGGAGAGTGGAACACTCCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCTCCTGTAAGGAACGGTGGGCGCCCGCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp CATTCCCAACCCAGGCCTGGCATGGTCCCTGCCCTTGCATCAGAGTaGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAACGCCAAA +
Preference number: 1 (lower is better)
Translates to: HSQPRPGMVPALASE*PGRYTHLYRPRNAK
Trigger: TTTGGCGTTTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTTGGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 90 bp TCTTTGACACACCTGAAAGGAAACTCCCACGCCCTCACCCTCCTTTaGTCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTGCAGTG +
Preference number: 1 (lower is better)
Translates to: SLTHLKGNSHALTLL*SGLQVGAEDPRTAV
Trigger: CACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGTGGGAGTTTCCTTTCAGGTGTGTCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp CTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGTAGCCCTCTaGTGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCAAT +
Preference number: 1 (lower is better)
Translates to: LASPQERVHPAPVAL*CLPSCVHTERQSSN
Trigger: ATTGGAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp AAATATGCAGAATCAATGGCTGCAGCTGCCAAAACAAATGGAGTATaGCCACCTCTGCCACGGCATCGCTGCAGACCTGCCCTGCCCGGG +
Preference number: 1 (lower is better)
Translates to: KYAESMAAAAKTNGV*PPLPRHRCRPALPG
Trigger: CCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGCTGCAGCCATTGATTCTGCATATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp ACACAACTGGAGGGGCAGCTAAGCCACGGCAGTCCCCGGCAGGTTTaGCCACGCCAGAACTCGGTATATGTTTATCTACATGGACTTCGG +
Preference number: 1 (lower is better)
Translates to: TQLEGQLSHGSPRQV*PRQNSVYVYLHGLR
Trigger: CCGAAGTCCATGTAGATAAACATATACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTGCCGTGGCTTAGCTGCCCCTCCAGTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp TACAGGCCCAGAAACGCCAAAGGCTGGGAGGCTCTTGTTCTCTGGTaGATCCGGATTCAAGACAGGCTTCGCAAAAGCAGCTCTTGGGCC +
Preference number: 1 (lower is better)
Translates to: YRPRNAKGWEALVLW*IRIQDRLRKSSSWA
Trigger: GGCCCAAGAGCTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCCCAGCCTTTGGCGTTTCTGGGCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp GCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATaGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCATCG +
Preference number: 1 (lower is better)
Translates to: AGNVVRSYPGQAALE*KSLSRRRSHIKPPS
Trigger: CGATGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp ACTAGGAGGAAGCGGCTGACCCGTTGGCTCTTTCTAGAGCGCAGCTaGTATGTCTTTGACACACCTGAAAGGAAACTCCCACGCCCTCAC +
Preference number: 1 (lower is better)
Translates to: TRRKRLTRWLFLERS*YVFDTPERKLPRPH
Trigger: GTGAGGGCGTGGGAGTTTCCTTTCAGGTGTGTCAAAGACATATCAGCTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTTCCTCCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp GTGCATTTGTGGCACTTCCTCTGTGGCCCAAGTGCCAGGATGAGCTaGATCCGTGTCTCATTTAGGAGACATGCACGATGGGTCTCTGTC +
Preference number: 1 (lower is better)
Translates to: VHLWHFLCGPSARMS*IRVSFRRHARWVSV
Trigger: GACAGAGACCCATCGTGCATGTCTCCTAAATGAGACACGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGGAAGTGCCACAAATGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp AGGGTGCCTCCAGGTAGCAAAGGCCCAATGGCTTTCTCCTCCGCCTaGGTGTTTGCGTGCCATTTTTGTATTCCAACACAGGCCTGTCTA +
Preference number: 1 (lower is better)
Translates to: RVPPGSKGPMAFSSA*VFACHFCIPTQACL
Trigger: TAGACAGGCCTGTGTTGGAATACAAAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGCCATTGGGCCTTTGCTACCTGGAGGCACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 90 bp CTTGTGTGCATTTGTGGCACTTCCTCTGTGGCCCAAGTGCCAGGATaGGCTGCATCCGTGTCTCATTTAGGAGACATGCACGATGGGTCT +
Preference number: 1 (lower is better)
Translates to: LVCICGTSSVAQVPG*AASVSHLGDMHDGS
Trigger: AGACCCATCGTGCATGTCTCCTAAATGAGACACGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGGAAGTGCCACAAATGCACACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp TATTCCAGCAGAATGAACACTCTATGGAGGCCCATTCCTAAAGGGTaGCTCCAGGTAGCAAAGGCCCAATGGCTTTCTCCTCCGCCTGAG +
Preference number: 1 (lower is better)
Translates to: YSSRMNTLWRPIPKG*LQVAKAQWLSPPPE
Trigger: CTCAGGCGGAGGAGAAAGCCATTGGGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGGCCTCCATAGAGTGTTCATTCTGCTGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 90 bp TGGAGGCCCATTCCTAAAGGGTGCCTCCAGGTAGCAAAGGCCCAATaGCTTTCTCCTCCGCCTGAGTGTTTGCGTGCCATTTTTGTATTC +
Preference number: 1 (lower is better)
Translates to: WRPIPKGCLQVAKAQ*LSPPPECLRAIFVF
Trigger: GAATACAAAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGCCATTGGGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGGCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp CCTGTCCCCGATTCCTCACTATTTTCCTCCTTCTGGCTGCTCTGCTaGTCTGGACACTCAAAGTGGACACAGTGGAACACCTCATTTGCT +
Preference number: 1 (lower is better)
Translates to: PVPDSSLFSSFWLLC*SGHSKWTQWNTSFA
Trigger: AGCAAATGAGGTGTTCCACTGTGTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAAATAGTGAGGAATCGGGGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR GCA 90 bp TCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTaGCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGT +
Preference number: 1 (lower is better)
Translates to: SHTWTQGFRTHGLYI*PLRLLCKMRKKPHR
Trigger: ACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 90 bp CCCCGATTCCTCACTATTTTCCTCCTTCTGGCTGCTCTGCTGCTCTaGACACTCAAAGTGGACACAGTGGAACACCTCATTTGCTGTGTT +
Preference number: 1 (lower is better)
Translates to: PRFLTIFLLLAALLL*TLKVDTVEHLICCV
Trigger: AACACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAAATAGTGAGGAATCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR CCA 90 bp CATTTAGTTGCCAGGGCAATGTATTCCAGCAGAATGAACACTCTATaGAGGCCCATTCCTAAAGGGTGCCTCCAGGTAGCAAAGGCCCAA +
Preference number: 1 (lower is better)
Translates to: HLVARAMYSSRMNTL*RPIPKGCLQVAKAQ
Trigger: TTGGGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGGCCTCCATAGAGTGTTCATTCTGCTGGAATACATTGCCCTGGCAACTAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 90 bp TTTGCTGTGTTGTGTGTCCCAACGATACGGATGAAGGAGGCAGGCTaGCTTTCAAAAGTTACTGACTGCCAGGACTTGCAGGAGACTTTA +
Preference number: 1 (lower is better)
Translates to: FAVLCVPTIRMKEAG*LSKVTDCQDLQETL
Trigger: TAAAGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGACACACAACACAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR TCA 90 bp GAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAATaGGGAAGAAGCCGCATCGTGCTCACAAATAATACACATTCCACA +
Preference number: 1 (lower is better)
Translates to: EHTVCTSARLGCSAK*GRSRIVLTNNTHST
Trigger: TGTGGAATGTGTATTATTTGTGAGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 90 bp ACGCCAGAACTCGGTATATGTTTATCTACATGGACTTCGGAACAGTaGATTAGCAGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCA +
Preference number: 1 (lower is better)
Translates to: TPELGICLSTWTSEQ*ISSGHSNYFLVSLP
Trigger: TGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCTGCTAATTCACTGTTCCGAAGTCCATGTAGATAAACATATACCGAGTTCTGGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCGTGCCATGCCGTCCTaGGGAGACTCCCAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRRAMPS*GDSQAD
Trigger: ATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCAAGGACTGCAGTGCTaGTCACGTGCCATGCCGTCC +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRQGLQC*SRAMPS
Trigger: GGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGAGTCCCCGGCAGGTTTaGCCACGCCAGAACTCGGTA +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSPRQV*PRQNSV
Trigger: TACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACT...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTTGAGTACTGTGGTGTaGGGGAAGCACGGAGTCCCA +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRLSTVV*GKHGVP
Trigger: TGGGACTCCGTGCTTCCCCCACACCACAGTACTCAA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCAGAGGCCGGAGCTCTaGGGACAGCGGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALQRPEL*GQRRGR
Trigger: CCTGCCCCTCCGCTGTCCCCAGAGCTCCGGCCTCTG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCCCGGGGCTGGGGGCTaGCAGAGTCAGCAACCATGC +
Preference number: 2 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALPGAGG*QSQQPC
Trigger: GCATGGTTGCTGACTCTGTCAGCCCCCAGCCCCGGG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCAGCTCTCTGGCTAATTaGCAACCCGGGGCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPSSLAN*QPGAGG
Trigger: GCCCCCAGCCCCGGGTTGCCAATTAGCCAGAGAGCT...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGGATCCATGTCAGGAATaGCAGGTGAGTAACTCAGCC +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRDPCQE*QVSNSA
Trigger: GGCTGAGTTACTCACCTGTCATTCCTGACATGGATC...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGGAACGTGTCCACCCTaGCCCGGTAGCCCTCTGATG +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPGTCPP*PGSPLM
Trigger: CATCAGAGGGCTACCGGGGCAGGGTGGACACGTTCC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGAGGAAGTGCTGTGTGTaGAGGAGCTCTCTGGCTAAT +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRRKCCV*RSSLAN
Trigger: ATTAGCCAGAGAGCTCCTGCACACACAGCACTTCCT...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGAGTCCCCGGCAGGTTTaGCCACGCCAGAACTCGGTA +
Preference number: 2 (lower is better)
Translates to: TPRLMLMATEAGALGTAESPRQV*PRQNSV
Trigger: TACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCTTGGCAACCCGGGGCTaGGGGCTGACAGAGTCAGCA +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPLATRG*GLTESA
Trigger: TGCTGACTCTGTCAGCCCCCAGCCCCGGGTTGCCAA...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCAGCTCTCTGGCTAATTaGCAACCCGGGGCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPSSLAN*QPGAGG
Trigger: GCCCCCAGCCCCGGGTTGCCAATTAGCCAGAGAGCT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGGAGGGACAGAGATCTaGAAGGGCATGCCCCGAAGG +
Preference number: 2 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPGGTEI*KGMPRR
Trigger: CCTTCGGGGCATGCCCTTCCAGATCTCTGTCCCTCC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGCCCAAGTGCCAGGATaGGCTGCATCCGTGTCTCAT +
Preference number: 2 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEAQVPG*AASVSH
Trigger: ATGAGACACGGATGCAGCTCATCCTGGCACTTGGGC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGCCCCGGTAGCCCTCTaGTGTCTGCCATCCTGTGTT +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPAPVAL*CLPSCV
Trigger: AACACAGGATGGCAGACATCAGAGGGCTACCGGGGC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAGCTGCTCACGTGCCATaGCGTCCTGGGGAGACTCCC +
Preference number: 2 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGAAHVP*RPGETP
Trigger: GGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGC...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGTTACTGAGGACCATTaGCCTCATGGGCCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPVTEDH*PHGPRP
Trigger: TGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAAC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGCTGCAGACCTGCCCTaGCCGGGCCGTGCCCGACCT +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEAADLP*PGRARP
Trigger: AGGTCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCCCAAGCTTAAAGGCTaGATCCATGTCAGGAATGAC +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRPKLKG*IHVRND
Trigger: GTCATTCCTGACATGGATCCAGCCTTTAAGCTTGGG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGCTCAGCCCTGCAGCTaGAGCTACCGGGGAGGATGG +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSAQPCS*SYRGGW
Trigger: CCATCCTCCCCGGTAGCTCCAGCTGCAGGGCTGAGC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTGTGCAGGAGCTCTCTaGCTAATTGGCAACCCGGGG +
Preference number: 2 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPCAGAL*LIGNPG
Trigger: CCCCGGGTTGCCAATTAGCCAGAGAGCTCCTGCACA...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCCTAGCTGGAAGGCCGTaGGGCTTGGGGCCAGCACTG +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSLAGRP*GLGPAL
Trigger: CAGTGCTGGCCCCAAGCCCCACGGCCTTCCAGCTAG...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTTTCTAGAGCGCAGCTaGTATGTCTTTGACACACCT +
Preference number: 2 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRFLERS*YVFDTP
Trigger: AGGTGTGTCAAAGACATATCAGCTGCGCTCTAGAAA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTCCCGGGGCTGGGGGCTaGCAGAGTCAGCAACCATGC +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPPGAGG*QSQQPC
Trigger: GCATGGTTGCTGACTCTGTCAGCCCCCAGCCCCGGG...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCCTCTGTGGCCCAAGTaGCAGGATGAGCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALPLWPK*QDELHP
Trigger: CGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGGGCAGGCAATGTTGTaGGCAGTTACCCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALGQAML*AVTQGR
Trigger: CCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGCTGCTCACGTGCCATaGCGTCCTGGGGAGACTCCC +
Preference number: 2 (lower is better)
Translates to: VPALASEWPGRYTHLYRPAAHVP*RPGETP
Trigger: GGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTCCTTTGATCAGGGTTaGAGGTTGGCGCCGAAGACC +
Preference number: 2 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPSFDQG*RLAPKT
Trigger: GGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGA...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGCACAGGAGGGCTCTaGGTGCTCTGTGGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: VPALASEWPGRYTHLYRPSTGGL*VLCGQG
Trigger: CCCCTGCCCACAGAGCACGCAGAGCCCTCCTGTGCT...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACAGCACAGGAGGGCTCTaGGTGCTCTGTGGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHSTGGL*VLCGQG
Trigger: CCCCTGCCCACAGAGCACGCAGAGCCCTCCTGTGCT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCAGAGGCCGGAGCTCTaGGGACAGCGGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFQRPEL*GQRRGR
Trigger: CCTGCCCCTCCGCTGTCCCCAGAGCTCCGGCCTCTG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCCAGGTGTGTAGCTCCTaGCTGCAGGGCCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSQVCSS*LQGLLH
Trigger: GTGGAGGAGGCCCTGCAGCCAGGAGCTACACACCTG...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 90 bp CTGGGGAACTCCAGGCTGCCCGGGGACTTTCTGGTAGCCACTCACTaGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGGT +
Preference number: 2 (lower is better)
Translates to: LGNSRLPGDFLVATH*SLFPGDEVLALVCG
Trigger: ACCACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTACCAGAAAGTCCCCGGGCAGCCTGGAGTTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGGCAGAGATCAGAGCTaGGGGGATAGGAAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALGRDQS*GDRKQL
Trigger: GAGCTGCTTCCTATCCCCTCAGCTCTGATCTCTGCC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCAGCCTCCTCCCATTATaGAATGCCTGGCATCCCAGG +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPSLLPL*NAWHPR
Trigger: CCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCCTGGCAGCGCGGCTGTaGGGGAATGAGACTTTGCCA +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSLAARL*GNETLP
Trigger: TGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAG...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACCTGTTCCCTGGAGATaGGGTCCTTGCCCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSPVPWR*GPCPGV
Trigger: CACACCAGGGCAAGGACCTCATCTCCAGGGAACAGG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGAGGAGACCGTTTCCTaGCGTTGCCCGAGCCCACCA +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHEETVS*RCPSPP
Trigger: TGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAACCCAAGGACTGCAGTaGTGCTCACGTGCCATGCCG +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSTQGLQ*CSRAMP
Trigger: CGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGT...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAGCATCGCTGCAGACCTaGCCTGCCCGGGCCGTGCCC +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKASLQT*PARAVP
Trigger: GGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGC...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGCTTGTGTGCATTTGTaGCACTTCCTCTGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: TPRLMLMATEAGALGTAEACVHL*HFLCGP
Trigger: TGGGCCACAGAGGAAGTGCCACAAATGCACACAAGC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCCGTGCCATGCCGTCCTaGGGAGACTCCCAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: VPALASEWPGRYTHLYRPRAMPS*GDSQAD
Trigger: ATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACG...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAAGGTCGCTTTGGTCCTaGTGGCCCAGGGGAGAAGTG +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSRSLWS*WPRGEV
Trigger: CACTTCTCCCCTGGGCCACCAGGACCAAAGCGACCT...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCAGGTCGCTTTGGTCCTaGTGGCCCAGGGGAGAAGTG +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSRSLWS*WPRGEV
Trigger: CACTTCTCCCCTGGGCCACCAGGACCAAAGCGACCT...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGCCTCCACTCTCTGCTaGGCTGAGGGCTCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHASTLC*AEGSVV
Trigger: CACCACAGAGCCCTCAGCCCAGCAGAGAGTGGAGGC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 90 bp AAGGAAACTCCCACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTaGGCGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATG +
Preference number: 2 (lower is better)
Translates to: KETPTPSPSFDQGCR*APKTQGLQCCSRAM
Trigger: CATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGTGGGAGTTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 90 bp GGAGATGAGGTCCTTGCCCTGGTGTGTGGTGTGACACACCTTGACTaGGCCTCCAGGCCCAGCTGGACACACGAAAAGAGTTCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: GDEVLALVCGVTHLD*ASRPSWTHEKSSCP
Trigger: GGGGCAGGAACTCTTTTCGTGTGTCCAGCTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCACACACCAGGGCAAGGACCTCATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 90 bp CTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGTGTCCTTTCCATaGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: LCLGGGDHGALVSFP*VTEDHCPHGPRPQA
Trigger: TGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGGACACAAGGGCGCCATGGTCACCACCACCCAGGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGCCATTTTCTCCCCCTTaGGACCTGCCTGATTTGGAT +
Preference number: 2 (lower is better)
Translates to: TPRLMLMATEAGALGTAEPFSPP*DLPDLD
Trigger: ATCCAAATCAGGCAGGTCTCAAGGGGGAGAAAATGG...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGCTTTCTCCTCCGCCTaGGTGTTTGCGTGCCATTTT +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPAFSSA*VFACHF
Trigger: AAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGTGGACTTCGGAACAGTaGATTAGCAGCGGGCATAGT +
Preference number: 2 (lower is better)
Translates to: TPRLMLMATEAGALGTAEWTSEQ*ISSGHS
Trigger: ACTATGCCCGCTGCTAATTCACTGTTCCGAAGTCCA...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCTGGCAGCGCGGCTGTaGGGGAATGAGACTTTGCCA +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHLAARL*GNETLP
Trigger: TGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACTGGTGTGACACACCTTaGCTTGGCCTCCAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHWCDTP*LGLQAQ
Trigger: CTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCA...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTGAGGAGACCGTTTCCTaGCGTTGCCCGAGCCCACCA +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPEETVS*RCPSPP
Trigger: TGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTC...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCAGTGCCAGGATGAGCTaGATCCGTGTCTCATTTAGG +
Preference number: 2 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPSARMS*IRVSFR
Trigger: CCTAAATGAGACACGGATGCAGCTCATCCTGGCACT...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCCCTCTGTGGCCCAAGTaGCAGGATGAGCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: VPALASEWPGRYTHLYRPPLWPK*QDELHP
Trigger: CGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGG...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGCTGCTCACGTGCCATaGCGTCCTGGGGAGACTCCC +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEAAHVP*RPGETP
Trigger: GGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGAAGCAGCTCAGCCCTaGAGCTGGAGCTACCGGGGA +
Preference number: 2 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQEAAQP*SWSYRG
Trigger: TCCCCGGTAGCTCCAGCTGCAGGGCTGAGCTGCTTC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTTTGAGTACTGTGGTGTaGGGGAAGCACGGAGTCCCA +
Preference number: 2 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALLSTVV*GKHGVP
Trigger: TGGGACTCCGTGCTTCCCCCACACCACAGTACTCAA...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTCTGTGGGCAGGGGACTaGAGGGTTGCAGATGCAGGG +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCLWAGD*RVADAG
Trigger: CCCTGCATCTGCAACCCTCCAGTCCCCTGCCCACAG...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGTGTTTAGGTCGCTTTaGTCCTGGTGGCCCAGGGGA +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSVFRSL*SWWPRG
Trigger: TCCCCTGGGCCACCAGGACCAAAGCGACCTAAACAC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGGGCCGTGCCCGACCTaGGCATCGCTCGGAGGAGCT +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAGPCPT*ASLGGA
Trigger: AGCTCCTCCGAGCGATGCCCAGGTCGGGCACGGCCC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGCAGAAAATCCTAGCTaGAAGGCCGTGGGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSAENPS*KAVGLG
Trigger: CCCAAGCCCCACGGCCTTCCAGCTAGGATTTTCTGC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGCCACCATCGTCAAATaGGGTCCTTTTGATGAGGAT +
Preference number: 2 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEATIVK*GPFDED
Trigger: ATCCTCATCAAAAGGACCTCATTTGACGATGGTGGC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGCCCTCACCCTCCTTTaGTCAGGGTTGCAGGTTGGC +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCALTLL*SGLQVG
Trigger: GCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGCCTGGGAAAGGAGGTaGACCCGTGTCCTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHAWERR*TRVLLE
Trigger: CTCCAAAAGGACACGGGTTCACCTCCTTTCCCAGGC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACTCTTTCCTCCTCCCTaGTGGAAGCCAGAGACCTAC +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSLFPPP*WKPETY
Trigger: GTAGGTCTCTGGCTTCCATCAGGGAGGAGGAAAGAG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCGAGGAGACCGTTTCCTaGCGTTGCCCGAGCCCACCA +
Preference number: 2 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFEETVS*RCPSPP
Trigger: TGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTC...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCCTTCCTCCTGTTCCCTaGGCCTGGGCTAGATTAGAG +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSLPPVP*AWARLE
Trigger: CTCTAATCTAGCCCAGGCGCAGGGAACAGGAGGAAG...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGGGCAGGCAATGTTGTaGGCAGTTACCCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCGQAML*AVTQGR
Trigger: CCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGAAGCAGCTCAGCCCTaGAGCTGGAGCTACCGGGGA +
Preference number: 2 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCEAAQP*SWSYRG
Trigger: TCCCCGGTAGCTCCAGCTGCAGGGCTGAGCTGCTTC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCCTCCCATTATGAAATaGCTGGCATCCCAGGAGTGT +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPPPIMK*LASQEC
Trigger: ACACTCCTGGGATGCCAGGCATTTCATAATGGGAGG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACAGGTCAGCAGCATGCTaGTTCAGGCCAAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHRSAAC*FRPRAS
Trigger: AGAGGCCCTTGGCCTGAAGCAGCATGCTGCTGACCT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGCCGAGCTGCCAAGCTaGTATCTCGTTCCCGGAGCA +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCAELPS*YLVPGA
Trigger: TGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGTCCATGTTGGCTTGTTaGCCCTGGGGCTGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTSMLAC*PWGWPG
Trigger: CCCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGA...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCAGCACACACCCTACCTaGCCTACACTCTCAGTCCAC +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSSTHPT*PTLSVH
Trigger: GTGGACTGAGAGTGTAGGGCAGGTAGGGTGTGTGCT...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACAGGAGACATGCACGATaGGTCTCTGTCCCCGCAAGC +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHRRHAR*VSVPAS
Trigger: GCTTGCGGGGACAGAGACCCATCGTGCATGTCTCCT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAGCTTGTGTGCATTTGTaGCACTTCCTCTGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: QAAISFPEHRRALRALWAACVHL*HFLCGP
Trigger: TGGGCCACAGAGGAAGTGCCACAAATGCACACAAGC...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTAGTCCCCGGCAGGTTTaGCCACGCCAGAACTCGGTA +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPSPRQV*PRQNSV
Trigger: TACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACT...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACATCAGGGTTGCAGGTTaGCGCCGAAGACCCAAGGAC +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHIRVAG*RRRPKD
Trigger: GTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGAT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGCTCTGCGTGCTCTGTaGGCAGGGGACTGGAGGGTT +
Preference number: 2 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCALRAL*AGDWRV
Trigger: AACCCTCCAGTCCCCTGCCCACAGAGCACGCAGAGC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCTGGGTGCAGCAGACTaGCCTGGGAGATGCCAGGGT +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTLGAAD*PGRCQG
Trigger: ACCCTGGCATCTCCCAGGCCAGTCTGCTGCACCCAG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 90 bp GCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTaGTGTCCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGC +
Preference number: 2 (lower is better)
Translates to: ATSHFFAWVVVTMAP*CPFHWLLRTIALMG
Trigger: GCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGGACACAAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGCCCAAGTGCCAGGATaGGCTGCATCCGTGTCTCAT +
Preference number: 2 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNAQVPG*AASVSH
Trigger: ATGAGACACGGATGCAGCTCATCCTGGCACTTGGGC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGGCAGAGATCAGAGCTaGGGGGATAGGAAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCGRDQS*GDRKQL
Trigger: GAGCTGCTTCCTATCCCCTCAGCTCTGATCTCTGCC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTGGCAGAGATCAGAGCTaGGGGGATAGGAAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPGRDQS*GDRKQL
Trigger: GAGCTGCTTCCTATCCCCTCAGCTCTGATCTCTGCC...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGGGCCTCTGGGCAGGTaGTGCCCATGTTTAAAAAGA +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSGPLGR*CPCLKR
Trigger: TCTTTTTAAACATGGGCATCACCTGCCCAGAGGCCC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCCTGTTCCCTGGAGATaGGGTCCTTGCCCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTPVPWR*GPCPGV
Trigger: CACACCAGGGCAAGGACCTCATCTCCAGGGAACAGG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGTTCAGCCTGGCTTCTaGCTGGAAGCTCGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEVQPGF*LEARWV
Trigger: CACCCAGCGAGCTTCCAGTCAGAAGCCAGGCTGAAC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCCCATTCCTAAAGGGTaGCTCCAGGTAGCAAAGGCC +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHPIPKG*LQVAKA
Trigger: GGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGTCCACAGGTTGATTTaGTTGTGTGCATTTGTGGCA +
Preference number: 2 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEVHRLI*LCAFVA
Trigger: TGCCACAAATGCACACAAGCAAATCAACCTGTGGAC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATACGGAGTCCCAGTTCTaGGTTCCTGACGCTGATGGG +
Preference number: 2 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNTESQF*VPDADG
Trigger: CCCATCAGCGTCAGGAACGCAGAACTGGGACTCCGT...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGACCCAAGGACTGCAGTaGTGCTCACGTGCCATGCCG +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTTQGLQ*CSRAMP
Trigger: CGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGT...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGGGAGGATGGAGAGCTaGAGACCCTGGCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCGRMES*RPWLLL
Trigger: GAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCCAAGGTCAGCAGCATaGTGCTTCAGGCCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTPRSAA*CFRPRA
Trigger: GGCCCTTGGCCTGAAGCAGCATGCTGCTGACCTTGG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGACCCTCCCCAGAGCTaGCAGAAGGTGACTTTGAAG +
Preference number: 2 (lower is better)
Translates to: VPALASEWPGRYTHLYRPDPPQS*QKVTLK
Trigger: CTTCAAAGTCACCTTCTGGCAGCTCTGGGGAGGGTC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTCTGCATGGACACAGCTaGTGCCCAGCACACACCCTA +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPLHGHS*CPAHTL
Trigger: TAGGGTGTGTGCTGGGCAGCAGCTGTGTCCATGCAG...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTTGGGCGGCCGGGCTGTaGTCCCTGAGGACCTTACTG +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAWAAGL*SLRTLL
Trigger: CAGTAAGGTCCTCAGGGAGCACAGCCCGGCCGCCCA...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTAAGCGGCTGACCCGTTaGCTCTTTCTAGAGCGCAGC +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCKRLTR*LFLERS
Trigger: GCTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTAAGCGGCTGACCCGTTaGCTCTTTCTAGAGCGCAGC +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPKRLTR*LFLERS
Trigger: GCTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTT...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGAGAGCTGCAGACCCTaGCTTCTCCTCAGGAACGTG +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCESCRP*LLLRNV
Trigger: CACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTTCCTTTGTCCCCATCTaGGTAGAAAACACACTGGGG +
Preference number: 2 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALSFVPI*VENTLG
Trigger: CCCCAGTGTGTTTTCTACCCAGATGGGGACAAAGGA...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGGGAGGGACAGAGATCTaGAAGGGCATGCCCCGAAGG +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTGGTEI*KGMPRR
Trigger: CCTTCGGGGCATGCCCTTCCAGATCTCTGTCCCTCC...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGAGGGGGAGGCGAGCTaGCAGCGCGGCTGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPEGEAS*QRGCEG
Trigger: TCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTC...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGGGCTGGCCTGGGCATaGGGGAGCTTATCTCCCCGA +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQGLAWA*GSLSPR
Trigger: TCGGGGAGATAAGCTCCCCCATGCCCAGGCCAGCCC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGTGATTTTCAAACAATaGTGTGTCGGGTGGGGCGGC +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSVIFKQ*CVGWGG
Trigger: GCCGCCCCACCCGACACACCATTGTTTGAAAATCAC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAACAGGCCCCACAGACCTaGAAGCTCTGCCCCAGTATC +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEQAPQT*KLCPSI
Trigger: GATACTGGGGCAGAGCTTCCAGGTCTGTGGGGCCTG...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 90 bp GTCTTTGACACACCTGAAAGGAAACTCCCACGCCCTCACCCTCCTTaGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTGCAGT +
Preference number: 2 (lower is better)
Translates to: VFDTPERKLPRPHPP*IRVAGWRRRPKDCS
Trigger: ACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGTGGGAGTTTCCTTTCAGGTGTGTCAAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGATCCATGTCAGGAATaGCAGGTGAGTAACTCAGCC +
Preference number: 2 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSDPCQE*QVSNSA
Trigger: GGCTGAGTTACTCACCTGTCATTCCTGACATGGATC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAGATCCATGTCAGGAATaGCAGGTGAGTAACTCAGCC +
Preference number: 2 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGDPCQE*QVSNSA
Trigger: GGCTGAGTTACTCACCTGTCATTCCTGACATGGATC...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATTTGAACTCTGCCCTTaGTATGACTGTCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: QAAISFPEHRRALRALWAFELCP*YDCLAP
Trigger: AGGAGCCAGACAGTCATATCAAGGGCAGAGTTCAAA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGGGCCTCTGGGCAGGTaGTGCCCATGTTTAAAAAGA +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHGPLGR*CPCLKR
Trigger: TCTTTTTAAACATGGGCATCACCTGCCCAGAGGCCC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCATCAGTCCTCACCAATaGCATCTACTGTTAGTGCCA +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPISPHQ*HLLLVP
Trigger: TGGCACTAACAGTAGATGTCATTGGTGAGGACTGAT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAACCCTGGTGTGTGGTGTaGCACACCTTGACTTGGCCT +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEPWCVV*HTLTWP
Trigger: AGGCCAAGTCAAGGTGTGTCACACCACACACCAGGG...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCCCTGGTGTGTGGTGTaGCACACCTTGACTTGGCCT +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTPWCVV*HTLTWP
Trigger: AGGCCAAGTCAAGGTGTGTCACACCACACACCAGGG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCCCATTCCTAAAGGGTaGCTCCAGGTAGCAAAGGCC +
Preference number: 2 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNPIPKG*LQVAKA
Trigger: GGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGG...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAACGGAGTCCCAGTTCTaGGTTCCTGACGCTGATGGG +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPETESQF*VPDADG
Trigger: CCCATCAGCGTCAGGAACGCAGAACTGGGACTCCGT...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGATGCGAGGCCGAGCTaGCAAGCTGCTATCTCGTTC +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEDARPS*QAAISF
Trigger: GAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTAGATCTGGAAGGGCATaGCCCGAAGGAAAGAACCGC +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCRSGRA*PEGKNR
Trigger: GCGGTTCTTTCCTTCGGGGCATGCCCTTCCAGATCT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGGGGTGGTTCATAGCTaGTTCAAGTCCAAAGTGCTC +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSGVVHS*FKSKVL
Trigger: GAGCACTTTGGACTTGAAGCAGCTATGAACCACCCC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCAGGCAGCACTGGAATaGAAATCACTAAGTAGGAGA +
Preference number: 2 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPQAALE*KSLSRR
Trigger: TCTCCTACTTAGTGATTTCCATTCCAGTGCTGCCTG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGTTGGCAACCCGGGGCTaGGGGCTGACAGAGTCAGCA +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQLATRG*GLTESA
Trigger: TGCTGACTCTGTCAGCCCCCAGCCCCGGGTTGCCAA...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAACTGTGGGCAGGGGACTaGAGGGTTGCAGATGCAGGG +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKLWAGD*RVADAG
Trigger: CCCTGCATCTGCAACCCTCCAGTCCCCTGCCCACAG...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGGGCTGAGGGCTCTGTaGTGCCCAGGAGCCCTCCCA +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPGLRAL*CPGALP
Trigger: TGGGAGGGCTCCTGGGCACCACAGAGCCCTCAGCCC...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTTCCCATTTCTTTGCCTaGGTGGTGGTGACCATGGCG +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPSHFFA*VVVTMA
Trigger: CGCCATGGTCACCACCACCCAGGCAAAGAAATGGGA...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAACTGGGGCTCATGTGGTaGGGAGCAATTTGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPELGLMW*GAIWQQ
Trigger: CTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAG...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGGGCGCACCAAGGCCTaGAGAGCCTTGGGGAGAGAT +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQGRTKA*RALGRD
Trigger: ATCTCTCCCCAAGGCTCTCCAGGCCTTGGTGCGCCC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GCCTCCTTTATTGGTGCTGCCGGTTGGGGGAGCGTGAGTTGGAGCCTGGGCTGGTCAAAGTGGACACAGTaGAACACCTCATTTGCTGTG +
Preference number: 2 (lower is better)
Translates to: ASFIGAAGWGSVSWSLGWSKWTQ*NTSFAV
Trigger: CACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGA...CCAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR CAA 90 bp AACACAACTGGAGGGGCAGCTAAGCCACGGCAGTCCCCGGCAGGTTaGGCCACGCCAGAACTCGGTATATGTTTATCTACATGGACTTCG +
Preference number: 2 (lower is better)
Translates to: NTTGGAAKPRQSPAG*ATPELGICLSTWTS
Trigger: CGAAGTCCATGTAGATAAACATATACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTGCCGTGGCTTAGCTGCCCCTCCAGTTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTGCTTTCTCCTCCGCCTaGGTGTTTGCGTGCCATTTT +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPAFSSA*VFACHF
Trigger: AAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGC...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGCCCTCACCCTCCTTTaGTCAGGGTTGCAGGTTGGC +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQALTLL*SGLQVG
Trigger: GCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCATTTGAACTCTGCCCTTaGTATGACTGTCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSFELCP*YDCLAP
Trigger: AGGAGCCAGACAGTCATATCAAGGGCAGAGTTCAAA...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGCGGCTGTGAGGGAATaGGACTTTGCCATCAGTCCT +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEAAVRE*DFAISP
Trigger: AGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAACCGTTTCCTGCCGTTaGCCGAGCCCACCAAGTCAC +
Preference number: 2 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPTVSCR*PSPPSH
Trigger: GTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGT...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTCCGCCTGAGTGTTTaGGTGCCATTTTTGTATTCC +
Preference number: 2 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGLRLSV*VPFLYS
Trigger: GGAATACAAAAATGGCACGCAAACACTCAGGCGGAG...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCCCATTCCTAAAGGGTaGCTCCAGGTAGCAAAGGCC +
Preference number: 2 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFPIPKG*LQVAKA
Trigger: GGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAACCTCTGTGGCCCAAGTaGCAGGATGAGCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKPLWPK*QDELHP
Trigger: CGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGG...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGAAAGCTTCTTGGAACTaGTATTTTTCAGTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: TPRLMLMATEAGALGTAEKASWN*YFSVPS
Trigger: ACTGGGGACTGAAAAATAGCAGTTCCAAGAAGCTTT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGTATTCCTTTTCAGATaGGAGGCCGAGCTGCCAAGC +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCVFLFR*EAELPS
Trigger: GCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATAC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAAGATCTGGAAGGGCATaGCCCGAAGGAAAGAACCGC +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPERSGRA*PEGKNR
Trigger: GCGGTTCTTTCCTTCGGGGCATGCCCTTCCAGATCT...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAACACGAAAAGAGTTCCTaGCCCAGTCAGAAGGCCCCT +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEHEKSS*PSQKAP
Trigger: AGGGGCCTTCTGACTGGGGCAGGAACTCTTTTCGTG...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCCATCAGGGGCTGTGGTaGAGGAGCAGCCACCAGGGC +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPHQGLW*RSSHQG
Trigger: GCCCTGGTGGCTGCTCCTGCACCACAGCCCCTGATG...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACAGGCAGCACTGGAATaGAAATCACTAAGTAGGAGA +
Preference number: 2 (lower is better)
Translates to: QAAISFPEHRRALRALWAQAALE*KSLSRR
Trigger: TCTCCTACTTAGTGATTTCCATTCCAGTGCTGCCTG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACTTGATATGACTGTCTaGCTCCTTTGTCCCCATCTG +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSLDMTV*LLCPHL
Trigger: CAGATGGGGACAAAGGAGCCAGACAGTCATATCAAG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAGGAGGGACAGAGATCTaGAAGGGCATGCCCCGAAGG +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKGGTEI*KGMPRR
Trigger: CCTTCGGGGCATGCCCTTCCAGATCTCTGTCCCTCC...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGTCGCTTTGGTCCTGGTaGCCCAGGGGAGAAGTGCTC +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQSLWSW*PRGEVL
Trigger: GAGCACTTCTCCCCTGGGCCACCAGGACCAAAGCGA...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACAGCAGTTTGACAACTaGGGCGACAGCATAATACTG +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSQQFDN*GDSIIL
Trigger: CAGTATTATGCTGTCGCCCCAGTTGTCAAACTGCTG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGTCGGAGCGTCCTCAGTaGTGCAGCCAAGAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQSERPQ*CSQEPG
Trigger: TCCTGGCTCTTGGCTGCACCACTGAGGACGCTCCGA...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTCAATGGTGTGTCGGGTaGGGCGGCTCTTCCATGCAC +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAQWCVG*GGSSMH
Trigger: GTGCATGGAAGAGCCGCCCCACCCGACACACCATTG...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTAGCCTGGCTTCTGACTaGAAGCTCGCTGGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRASLASD*KLAGCS
Trigger: GCTGCACCCAGCGAGCTTCCAGTCAGAAGCCAGGCT...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAGAGGGCCGTTCAGCCTaGCTTCTGACTGGAAGCTCG +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKEGRSA*LLTGSS
Trigger: CGAGCTTCCAGTCAGAAGCCAGGCTGAACGGCCCTC...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAACAGGCCCCACAGACCTaGAAGCTCTGCCCCAGTATC +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKQAPQT*KLCPSI
Trigger: GATACTGGGGCAGAGCTTCCAGGTCTGTGGGGCCTG...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCTCTGTCCCCGCAAGCTaGACCGTTCAAAACCAAGGA +
Preference number: 2 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFSVPAS*TVQNQG
Trigger: TCCTTGGTTTTGAACGGTTCAGCTTGCGGGGACAGA...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCTCTGTCCCCGCAAGCTaGACCGTTCAAAACCAAGGA +
Preference number: 2 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCSVPAS*TVQNQG
Trigger: TCCTTGGTTTTGAACGGTTCAGCTTGCGGGGACAGA...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGACTCAGCCACACGAGTaGCTATTAACTCCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQTQPHE*LLTPVS
Trigger: GGACACTGGAGTTAATAGTCACTCGTGTGGCTGAGT...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTTGGACTTCGGAACAGTaGATTAGCAGCGGGCATAGT +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCWTSEQ*ISSGHS
Trigger: ACTATGCCCGCTGCTAATTCACTGTTCCGAAGTCCA...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTACCGTTTCCTGCCGTTaGCCGAGCCCACCAAGTCAC +
Preference number: 2 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFTVSCR*PSPPSH
Trigger: GTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGT...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTAGTGCCAGGATGAGCTaGATCCGTGTCTCATTTAGG +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPSARMS*IRVSFR
Trigger: CCTAAATGAGACACGGATGCAGCTCATCCTGGCACT...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTAGTGCCAGGATGAGCTaGATCCGTGTCTCATTTAGG +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCSARMS*IRVSFR
Trigger: CCTAAATGAGACACGGATGCAGCTCATCCTGGCACT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGTCCACAGGTTGATTTaGTTGTGTGCATTTGTGGCA +
Preference number: 2 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSVHRLI*LCAFVA
Trigger: TGCCACAAATGCACACAAGCAAATCAACCTGTGGAC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGAAAGCTTCTTGGAACTaGTATTTTTCAGTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: DGELQTLASPQERVHPAPKASWN*YFSVPS
Trigger: ACTGGGGACTGAAAAATAGCAGTTCCAAGAAGCTTT...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGAGGTCAGCAGCATGCTaGTTCAGGCCAAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQRSAAC*FRPRAS
Trigger: AGAGGCCCTTGGCCTGAAGCAGCATGCTGCTGACCT...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAACGCTGATGGGCAGGTaGCTGCCTCTCCAATGCTTC +
Preference number: 2 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPTLMGR*LPLQCF
Trigger: GAAGCATTGGAGAGGCAGCCACCTGCCCATCAGCGT...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGAGGAGAAAAGCTTCTTaGAACTGCTATTTTTCAGTC +
Preference number: 2 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGERRKAS*NCYFSV
Trigger: GACTGAAAAATAGCAGTTCCAAGAAGCTTTTCTCCT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCAGCTACCGGGGAGGATaGAGAGCTGCAGACCCTGGC +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPSYRGG*RAADPG
Trigger: GCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCT...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAGCACTGTGCAAAGGATaGGTGAGCACGCTGTCCCTC +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKALCKG*VSTLSL
Trigger: GAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGC...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGGCCATGAGGCCTCTTaGGGACTATTTCAGTTCTTT +
Preference number: 2 (lower is better)
Translates to: VPALASEWPGRYTHLYRPGHEAS*GLFQFF
Trigger: AAAGAACTGAAATAGTCCCCAAGAGGCCTCATGGCC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 90 bp GGTATGACTGGATCCGTGTCAGCGAGAGAGATGGGGGCATTCCAGTaGTCCTGCATGCCATTTAAACCTTGCCCTTCCCTCTCTTCTGGA +
Preference number: 2 (lower is better)
Translates to: GMTGSVSAREMGAFQ*SCMPFKPCPSLSSG
Trigger: TCCAGAAGAGAGGGAAGGGCAAGGTTTAAATGGCATGCAGGACAACTGGAATGCCCCCATCTCTCTCGCTGACACGGATCCAGTCATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGATCCGGAACACCTATaGTTCACTGAGTGGAGAATA +
Preference number: 2 (lower is better)
Translates to: VPALASEWPGRYTHLYRPDPEHL*FTEWRI
Trigger: TATTCTCCACTCAGTGAATCATAGGTGTTCCGGATC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCACTCTGCCCTTGATATaGCTGTCTGGCTCCTTTGTC +
Preference number: 2 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCTLPLI*LSGSFV
Trigger: GACAAAGGAGCCAGACAGTCATATCAAGGGCAGAGT...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTAATAATAATGAAAAGTaGAGGGTGGGGGTGCTGGCC +
Preference number: 2 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPNNNEK*RVGVLA
Trigger: GGCCAGCACCCCCACCCTTCACTTTTCATTATTATT...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCAGAGGACGTGAACGATaGCGTGGGCCCAGGTCGGAA +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPRGRER*RGPRSE
Trigger: TTCCGACCTGGGCCCACGTCATCGTTCACGTCCTCT...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGCTTCCTCCTGTTCCCTaGGCCTGGGCTAGATTAGAG +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQLPPVP*AWARLE
Trigger: CTCTAATCTAGCCCAGGCGCAGGGAACAGGAGGAAG...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCACTTCCTCCTGTTCCCTaGGCCTGGGCTAGATTAGAG +
Preference number: 2 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPLPPVP*AWARLE
Trigger: CTCTAATCTAGCCCAGGCGCAGGGAACAGGAGGAAG...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCAGGAAGTGCTGTGTGTaGAGGAGCTCTCTGGCTAAT +
Preference number: 2 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCRKCCV*RSSLAN
Trigger: ATTAGCCAGAGAGCTCCTGCACACACAGCACTTCCT...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGACCCTCCCCAGAGCTaGCAGAAGGTGACTTTGAAG +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQDPPQS*QKVTLK
Trigger: CTTCAAAGTCACCTTCTGGCAGCTCTGGGGAGGGTC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGAGGAGAAAAGCTTCTTaGAACTGCTATTTTTCAGTC +
Preference number: 2 (lower is better)
Translates to: DGELQTLASPQERVHPAPRRKAS*NCYFSV
Trigger: GACTGAAAAATAGCAGTTCCAAGAAGCTTTTCTCCT...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGGGCTGAGGGCTCTGTaGTGCCCAGGAGCCCTCCCA +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFGLRAL*CPGALP
Trigger: TGGGAGGGCTCCTGGGCACCACAGAGCCCTCAGCCC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTTCCCATTTCTTTGCCTaGGTGGTGGTGACCATGGCG +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRASHFFA*VVVTMA
Trigger: CGCCATGGTCACCACCACCCAGGCAAAGAAATGGGA...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGATCCGGAACACCTATaGTTCACTGAGTGGAGAATA +
Preference number: 2 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIDPEHL*FTEWRI
Trigger: TATTCTCCACTCAGTGAATCATAGGTGTTCCGGATC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGGGCCTCTGGGCAGGTaGTGCCCATGTTTAAAAAGA +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQGPLGR*CPCLKR
Trigger: TCTTTTTAAACATGGGCATCACCTGCCCAGAGGCCC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCTCACTATTTTCCTCCTTCTGGCTGCTCTGCTGCTCTGGACACTCAAAGTGGACATTTCGGCTCCGACTaGCTCCTTCAATCACACTGG +
Preference number: 2 (lower is better)
Translates to: PHYFPPSGCSAALDTQSGHFGSD*LLQSHW
Trigger: CCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAATG...TCCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAAATAGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCTCCGCCTGAGTGTTTaGGTGCCATTTTTGTATTCC +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTLRLSV*VPFLYS
Trigger: GGAATACAAAAATGGCACGCAAACACTCAGGCGGAG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGTTGATTTGCTTGTGTaGATTTGTGGCACTTCCTCT +
Preference number: 2 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHVDLLV*ICGTSS
Trigger: AGAGGAAGTGCCACAAATGCACACAAGCAAATCAAC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCCGAAGACCCAAGGACTaGAGTGCTGCTCACGTGCCA +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPRRPKD*SAAHVP
Trigger: TGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCG...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATAGAATGAACACTCTATaGAGGCCCATTCCTAAAGGG +
Preference number: 2 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNRMNTL*RPIPKG
Trigger: CCCTTTAGGAATGGGCCTCCATAGAGTGTTCATTCT...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAAGGAGAAAAGCTTCTTaGAACTGCTATTTTTCAGTC +
Preference number: 2 (lower is better)
Translates to: QAAISFPEHRRALRALWARRKAS*NCYFSV
Trigger: GACTGAAAAATAGCAGTTCCAAGAAGCTTTTCTCCT...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGAAGGTGAAGTTGACTaGGCTGGAGCCATCTGCACA +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAEGEVD*AGAICT
Trigger: TGTGCAGATGGCTCCAGCCCAGTCAACTTCACCTTC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTAGAAACGCCAAAGGCTaGGAGGCTCTTGTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRARNAKG*EALVLW
Trigger: CCAGAGAACAAGAGCCTCCCAGCCTTTGGCGTTTCT...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 90 bp CTCCAGGTAGCAAAGGCCCAATGGCTTTCTCCTCCGCCTGAGTGTTaGCGTGCCATTTTTGTATTCCAACACAGGCCTGTCTATGACTTC +
Preference number: 2 (lower is better)
Translates to: LQVAKAQWLSPPPEC*RAIFVFQHRPVYDF
Trigger: GAAGTCATAGACAGGCCTGTGTTGGAATACAAAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGCCATTGGGCCTTTGCTACCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 90 bp ACACACATCTTTACAGGCCCAGAAACGCCAAAGGCTGGGAGGCTCTaGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCA +
Preference number: 2 (lower is better)
Translates to: THIFTGPETPKAGRL*FSGESGFKTGFAKA
Trigger: TGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCCCAGCCTTTGGCGTTTCTGGGCCTGTAAAGATGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGATCCGGAACACCTATaGTTCACTGAGTGGAGAATA +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEDPEHL*FTEWRI
Trigger: TATTCTCCACTCAGTGAATCATAGGTGTTCCGGATC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGACTCAGCCACACGAGTaGCTATTAACTCCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQTQPHE*LLTPVS
Trigger: GGACACTGGAGTTAATAGTCACTCGTGTGGCTGAGT...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCATGGACTTCGGAACAGTaGATTAGCAGCGGGCATAGT +
Preference number: 2 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPWTSEQ*ISSGHS
Trigger: ACTATGCCCGCTGCTAATTCACTGTTCCGAAGTCCA...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCAGCCTCCTCCCATTATaGAATGCCTGGCATCCCAGG +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPSLLPL*NAWHPR
Trigger: CCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCT...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GTGGAACACCTCATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAAGGAGGCTACGGTTGTGCCAACTaGACCACAATCGCACCACTT +
Preference number: 2 (lower is better)
Translates to: VEHLICCVVCPNDTDEGGYGCAN*TTIAPL
Trigger: AAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTA...GCCTCCTTCATCCGTATCGTTGGGACACACAACACAGCAAATGAGGTGTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGTTGATTTGCTTGTGTaGATTTGTGGCACTTCCTCT +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCVDLLV*ICGTSS
Trigger: AGAGGAAGTGCCACAAATGCACACAAGCAAATCAAC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGTTGATTTGCTTGTGTaGATTTGTGGCACTTCCTCT +
Preference number: 2 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIVDLLV*ICGTSS
Trigger: AGAGGAAGTGCCACAAATGCACACAAGCAAATCAAC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTAGGAAGTGCTGTGTGTaGAGGAGCTCTCTGGCTAAT +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRARKCCV*RSSLAN
Trigger: ATTAGCCAGAGAGCTCCTGCACACACAGCACTTCCT...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGGCCCAGGGGAGAAGTaGTCTGTAGGACCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFGPGEK*SVGPAR
Trigger: CCTGGCTGGTCCTACAGAGCACTTCTCCCCTGGGCC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTCAAACAAAGACCTGCTaGCTCCGCCCCTCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASQTKTC*LRPSSL
Trigger: GAGGGAGGAGGGGCGGAGGCAGCAGGTCTTTGTTTG...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTGAGCGTCCTCAGTGGTaGAGCCAAGAGCCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASERPQW*SQEPGR
Trigger: CCTTCCTGGCTCTTGGCTGCACCACTGAGGACGCTC...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGAGGTTGGAGCATTATaGCAGGAACAGGTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQEVGAL*QEQVFP
Trigger: AGGGAACACCTGTTCCTGGCATAATGCTCCAACCTC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTTTACTGGCAGCACCCTaGCCTGCTGACCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASLLAAP*PADPGS
Trigger: GCTTCCAGGGTCAGCAGGGCAGGGTGCTGCCAGTAA...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCAGAATGAACACTCTATaGAGGCCCATTCCTAAAGGG +
Preference number: 2 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFRMNTL*RPIPKG
Trigger: CCCTTTAGGAATGGGCCTCCATAGAGTGTTCATTCT...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGCTCTGCGTGCTCTGTaGGCAGGGGACTGGAGGGTT +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFALRAL*AGDWRV
Trigger: AACCCTCCAGTCCCCTGCCCACAGAGCACGCAGAGC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCTGCCCTGCTGGGTGCTaGCTGCATGGACACAGCTGC +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFCPAGC*LHGHSC
Trigger: GCAGCTGTGTCCATGCAGCCAGCACCCAGCAGGGCA...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAAGGAGGCAGGCTGCCTTTCTTCTGTCAGCAACCATaGTCCACTGTTGCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: ICCVVCPNDTDEGGRLPFFCQQP*STVAGW
Trigger: CCAACCAGCAACAGTGGACCATGGTTGCTGACAGAA...GAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGACACACAACACAGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR TCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGTTTAATCACGCAGTTTaGTGCTACCCTACTATTTCC +
Preference number: 2 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQFNHAV*CYPTIS
Trigger: GGAAATAGTAGGGTAGCATCAAACTGCGTGATTAAA...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTAAAGCTTCTTGGAACTaGTATTTTTCAGTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: VATHLSLFPGDEVLALVCKASWN*YFSVPS
Trigger: ACTGGGGACTGAAAAATAGCAGTTCCAAGAAGCTTT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTCGAAGACCCAAGGACTaGAGTGCTGCTCACGTGCCA +
Preference number: 2 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASRRPKD*SAAHVP
Trigger: TGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCG...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGGGAGGATGGAGAGCTaGAGACCCTGGCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFGRMES*RPWLLL
Trigger: GAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTAAAACAAATGGAGTATaGCCACCTCTGCCACGGCAT +
Preference number: 2 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAKTNGV*PPLPRH
Trigger: ATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTT...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp ATGAAGGAGGCAGGCTGCCTTTCAAAAGTTACTGACTGCCAGGACTTGCAGGAGACCATGGTCCACTGTTaGTGGTTGGTAGAAACCTCA +
Preference number: 2 (lower is better)
Translates to: MKEAGCLSKVTDCQDLQETMVHC*WLVETS
Trigger: TGAGGTTTCTACCAACCAGCAACAGTGGACCATGGT...CTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR CCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTGCAGAAAATCCTAGCTaGAAGGCCGTGGGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASAENPS*KAVGLG
Trigger: CCCAAGCCCCACGGCCTTCCAGCTAGGATTTTCTGC...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GTCCCAACGATACGGATGAAGGAGGCAGGCTGCCTTTCAAAAGTTACTGACTGCATGGTCCACTGTTGCTaGTTGGTAGAAACCTCAACG +
Preference number: 2 (lower is better)
Translates to: VPTIRMKEAGCLSKVTDCMVHCC*LVETST
Trigger: CGTTGAGGTTTCTACCAACCAGCAACAGTGGACCAT...GCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR TCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCCCAGTGTCCACAGGTTaGTTTGCTTGTGTGCATTTG +
Preference number: 2 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSPVSTG*FACVHL
Trigger: CAAATGCACACAAGCAAATCAACCTGTGGACACTGG...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGTTTCTAGAGCGCAGCTaGTATGTCTTTGACACACCT +
Preference number: 2 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQFLERS*YVFDTP
Trigger: AGGTGTGTCAAAGACATATCAGCTGCGCTCTAGAAA...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGTTTAATCACGCAGTTTaGTGCTACCCTACTATTTCC +
Preference number: 2 (lower is better)
Translates to: PGAHVVGSNLAADGLISTFNHAV*CYPTIS
Trigger: GGAAATAGTAGGGTAGCATCAAACTGCGTGATTAAA...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCCTAGGGCCGAGGCTTTaGAGCGTATTCCTTTTCAGA +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPLGPRL*SVFLFR
Trigger: TCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAG...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCACGCTGATGGGCAGGTaGCTGCCTCTCCAATGCTTC +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFTLMGR*LPLQCF
Trigger: GAAGCATTGGAGAGGCAGCCACCTGCCCATCAGCGT...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp GTCCCAACGATACGGATGAAGGAGGCAGGCTGCCTTTCAAAAGTTACTGACTGCTTGCAACATTCTCCATaGGAACTATCAGCCCCTTCT +
Preference number: 2 (lower is better)
Translates to: VPTIRMKEAGCLSKVTDCLQHSP*ELSAPS
Trigger: AGAAGGGGCTGATAGTTCCCATGGAGAATGTTGCAA...GCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR CAA 90 bp GGACTTGCAGGAGACTTTAGTTCTGTCAGCAACCATGGTCCACTGTaGCTGGTTGGTAGAAACCTCAACGTAGTAGCTATAGCTTCGATC +
Preference number: 2 (lower is better)
Translates to: GLAGDFSSVSNHGPL*LVGRNLNVVAIASI
Trigger: GATCGAAGCTATAGCTACTACGTTGAGGTTTCTACCAACCAGCAACAGTGGACCATGGTTGCTGACAGAACTAAAGTCTCCTGCAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR TCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCCCAGTGTCCACAGGTTaGTTTGCTTGTGTGCATTTG +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPPVSTG*FACVHL
Trigger: CAAATGCACACAAGCAAATCAACCTGTGGACACTGG...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGACTCAGCCACACGAGTaGCTATTAACTCCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMTQPHE*LLTPVS
Trigger: GGACACTGGAGTTAATAGTCACTCGTGTGGCTGAGT...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCTCCTTTGATCAGGGTTaGAGGTTGGCGCCGAAGACC +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFSFDQG*RLAPKT
Trigger: GGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGA...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGACGCAAATGGTAAATaGTCCCAGACATTTATCATA +
Preference number: 2 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEDANGK*SQTFII
Trigger: TATGATAAATGTCTGGGAGCATTTACCATTTGCGTC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCCCCAAGCTTAAAGGCTaGATCCATGTCAGGAATGAC +
Preference number: 2 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPPKLKG*IHVRND
Trigger: GTCATTCCTGACATGGATCCAGCCTTTAAGCTTGGG...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCACCATTTTCTCCCCCTTaGGACCTGCCTGATTTGGAT +
Preference number: 2 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSPFSPP*DLPDLD
Trigger: ATCCAAATCAGGCAGGTCTCAAGGGGGAGAAAATGG...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR GCA 90 bp CAGGAGACTTTAGTTCTGTCAGCAACCATGGTCCACTGTTGCTGGTTGGTAGAAAATCATGTACGGTTGTaGCAACTGAACCACAATCGC +
Preference number: 2 (lower is better)
Translates to: QETLVLSATMVHCCWLVENHVRL*QLNHNR
Trigger: GCGATTGTGGTTCAGTTGGCACAACCGTACATGATT...TTCTACCAACCAGCAACAGTGGACCATGGTTGCTGACAGAACTAAAGTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAAATATGCAGAATCAATaGCTGCAGCTGCCAAAACAA +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKNMQNQ*LQLPKQ
Trigger: TTGTTTTGGCAGCTGCAGCCATTGATTCTGCATATT...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTTGTATTCCAGCAGAATaGACACTCTATGGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASCIPAE*TLYGGP
Trigger: TGGGCCTCCATAGAGTGTTCATTCTGCTGGAATACA...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGGGGTGGTTCATAGCTaGTTCAAGTCCAAAGTGCTC +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFGVVHS*FKSKVL
Trigger: GAGCACTTTGGACTTGAAGCAGCTATGAACCACCCC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR GCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAGACGCAAATGGTAAATaGTCCCAGACATTTATCATA +
Preference number: 2 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKDANGK*SQTFII
Trigger: TATGATAAATGTCTGGGAGCATTTACCATTTGCGTC...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 90 bp AGGAGACGGAGCCACATCAAGCCACCATCGTCAAATGAGGTCCTTTaGATGAGGATTAGGAGAAAAGCTTCTTGGAACTGCTATTTTTCA +
Preference number: 2 (lower is better)
Translates to: RRRSHIKPPSSNEVL*MRIRRKASWNCYFS
Trigger: TGAAAAATAGCAGTTCCAAGAAGCTTTTCTCCTAATCCTCATCAAAAGGACCTCATTTGACGATGGTGGCTTGATGTGGCTCCGTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR TCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCCCAGTGTCCACAGGTTaGTTTGCTTGTGTGCATTTG +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFPVSTG*FACVHL
Trigger: CAAATGCACACAAGCAAATCAACCTGTGGACACTGG...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCCCCCAAAAGCTCCAATaGAGTTGCCTTTCTACTCTC +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFPQKLQ*SCLSTL
Trigger: GAGAGTAGAAAGGCAACTTCATTGGAGCTTTTGGGG...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR TCA 90 bp GACACAGTGGAACACCTCATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAATTGTTCACTGTGTTGTaGGTCCCAACAATTCGAATA +
Preference number: 2 (lower is better)
Translates to: DTVEHLICCVVCPNDTDELFTVL*VPTIRI
Trigger: TATTCGAATTGTTGGGACTCACAACACAGTGAACAA...TTCATCCGTATCGTTGGGACACACAACACAGCAAATGAGGTGTTCCACTGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR TCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCATCAGTCCTCACCAATaGCATCTACTGTTAGTGCCA +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFISPHQ*HLLLVP
Trigger: TGGCACTAACAGTAGATGTCATTGGTGAGGACTGAT...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CCA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCCAGGCAGCACTGGAATaGAAATCACTAAGTAGGAGA +
Preference number: 2 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFQAALE*KSLSRR
Trigger: TCTCCTACTTAGTGATTTCCATTCCAGTGCTGCCTG...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp GCGTGCTCTGTGGGCAGGGGACTGGAGGGTTGCAGATaGAGGGCCGGGCAGCTCCTCCAGCACCCCCACCAG +
Preference number: 3 (lower is better)
Translates to: ACSVGRGLEGCR*RAGQLLQHPHQ
Trigger: CTGGTGGGGGTGCTGGAGGAGCTGCCCGGCCCTGCATCTGCAACCCTCCAGTCCCCTGCCCACAGAGCACGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp AGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTaGCCTGCCCGGGCCGTGCCCGACCTGGGCATCGCT +
Preference number: 3 (lower is better)
Translates to: SMPTSATASLQT*PARAVPDLGIA
Trigger: AGCGATGCCCAGGTCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp AGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTaGCCGAGCCCACCAAGTCACACCAGGCCCGCTGCC +
Preference number: 3 (lower is better)
Translates to: RPLLREETVSCR*PSPPSHTRPAA
Trigger: GGCAGCGGGCCTGGTGTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp ACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTaGAGACCTGCCCTGCCCGGGCCGTGCCCGACCTGG +
Preference number: 3 (lower is better)
Translates to: TNGVCPPLPRHR*RPALPGPCPTW
Trigger: CCAGGTCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 72 bp CGTGGGGCTTGGGGCCAGCACTGTGCAAAGGATGGGTaGGCACGCTGTCCCTCGGAGCGTCCTCAGTGGTGC +
Preference number: 3 (lower is better)
Translates to: RGAWGQHCAKDG*ARCPSERPQWC
Trigger: GCACCACTGAGGACGCTCCGAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGCTGGCCCCAAGCCCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp CTAGCTGGAAGGCCGTGGGGCTTGGGGCCAGCACTGTaGAAAGGATGGGTGAGCACGCTGTCCCTCGGAGCG +
Preference number: 3 (lower is better)
Translates to: LAGRPWGLGPAL*KGWVSTLSLGA
Trigger: CGCTCCGAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGCTGGCCCCAAGCCCCACGGCCTTCCAGCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp CTGGAGCTACCGGGGAGGATGGAGAGCTGCAGACCCTaGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGG +
Preference number: 3 (lower is better)
Translates to: LELPGRMESCRP*LLLRNVSTLPR
Trigger: CCGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp AGGCCGTGGGGCTTGGGGCCAGCACTGTGCAAAGGATaGGTGAGCACGCTGTCCCTCGGAGCGTCCTCAGTG +
Preference number: 3 (lower is better)
Translates to: RPWGLGPALCKG*VSTLSLGASSV
Trigger: CACTGAGGACGCTCCGAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGCTGGCCCCAAGCCCCACGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp GATGGGGCAGGAGGGCCGTTCAGCCTGGCTTCTGACTaGAAGCTCGCTGGGTGCAGCAGACTGGCCTGGGAG +
Preference number: 3 (lower is better)
Translates to: DGAGGPFSLASD*KLAGCSRLAWE
Trigger: CTCCCAGGCCAGTCTGCTGCACCCAGCGAGCTTCCAGTCAGAAGCCAGGCTGAACGGCCCTCCTGCCCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCCACCTCTCTCCATGTaGGCTTGTTGCCCCTGGGGC +
Preference number: 3 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPPPLSM*ACCPWG
Trigger: GCCCCAGGGGCAACAAGCCAACATGGAGAGAGGTGG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp CAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTaGCGTTGCCCGAGCCCACCAAGTCACACCAGGCCC +
Preference number: 3 (lower is better)
Translates to: QQRPLLREETVS*RCPSPPSHTRP
Trigger: GGGCCTGGTGTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp TGCAGGTTGGCGCCGAAGACCCAAGGACTGCAGTGCTaGTCACGTGCCATGCCGTCCTGGGGAGACTCCCAG +
Preference number: 3 (lower is better)
Translates to: CRLAPKTQGLQC*SRAMPSWGDSQ
Trigger: CTGGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp GGTTGCAGGTTGGCGCCGAAGACCCAAGGACTGCAGTaGTGCTCACGTGCCATGCCGTCCTGGGGAGACTCC +
Preference number: 3 (lower is better)
Translates to: GCRLAPKTQGLQ*CSRAMPSWGDS
Trigger: GGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp GCCCTGCAGCTGGAGCTACCGGGGAGGATGGAGAGCTaGAGACCCTGGCTTCTCCTCAGGAACGTGTCCACC +
Preference number: 3 (lower is better)
Translates to: ALQLELPGRMES*RPWLLLRNVST
Trigger: GGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCTCCAGCTGCAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp CCAGCCCACCCTCTCTTCCCAAGGTCAGCAGCATGCTaGTTCAGGCCAAGGGCCTCTGGGCAGGTGATGCCC +
Preference number: 3 (lower is better)
Translates to: PAHPLFPRSAAC*FRPRASGQVMP
Trigger: GGGCATCACCTGCCCAGAGGCCCTTGGCCTGAAGCAGCATGCTGCTGACCTTGGGAAGAGAGGGTGGGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp GCAGCTCAGCCCTGCAGCTGGAGCTACCGGGGAGGATaGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACG +
Preference number: 3 (lower is better)
Translates to: AAQPCSWSYRGG*RAADPGFSSGT
Trigger: CGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCTCCAGCTGCAGGGCTGAGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp AGGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTaGCAGCGCGGCTGTGAGGGAATGAGACTTTGCCAT +
Preference number: 3 (lower is better)
Translates to: RAGSQQSEGEAS*QRGCEGMRLCH
Trigger: ATGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp CACCTGCCACCTCTCTCCATGTTGGCTTGTTGCCCCTaGGGCTGGCCTGGGCATGGGGGAGCTTATCTCCCC +
Preference number: 3 (lower is better)
Translates to: HLPPLSMLACCP*GWPGHGGAYLP
Trigger: GGGGAGATAAGCTCCCCCATGCCCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGAGAGAGGTGGCAGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp GGCACTGGCCGCACCCTCAGGCCCAGGTGGGAAGTGTaGGCTGGGGGTAAACCCAGCAACTCAGGACTAGCA +
Preference number: 3 (lower is better)
Translates to: GTGRTLRPRWEV*AGGKPSNSGLA
Trigger: TGCTAGTCCTGAGTTGCTGGGTTTACCCCCAGCCCACACTTCCCACCTGGGCCTGAGGGTGCGGCCAGTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGACCGTTTCCTGCCGTaGCCCGAGCCCACCAAGTCA +
Preference number: 3 (lower is better)
Translates to: DGELQTLASPQERVHPAPDRFLP*PEPTKS
Trigger: TGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp GGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTaGACCCGTGTCCTTTTGGAGTCCAGGGCAGGCTCC +
Preference number: 3 (lower is better)
Translates to: GKGSTPPAWERR*TRVLLESRAGS
Trigger: GGAGCCTGCCCTGGACTCCAAAAGGACACGGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp AGGGAGCACCGTGACCAGTGGTGGTCACAGAGGACGTaGACGATGACGTGGGCCCAGGTCGGAAGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: REHRDQWWSQRT*TMTWAQVGSSQ
Trigger: CTGGCTGCTTCCGACCTGGGCCCACGTCATCGTTCACGTCCTCTGTGACCACCACTGGTCACGGTGCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp ATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTaGAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: IRVAGWRRRPKD*SAAHVPCRPGE
Trigger: CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp GTGAAGGGTGGGGGTGCTGGCCACCTCCCATTTCTTTaGCTGGGTGGTGGTGACCATGGCGCCCTTGTGTCC +
Preference number: 3 (lower is better)
Translates to: VKGGGAGHLPFL*LGGGDHGALVS
Trigger: GGACACAAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCCCACCCTTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp CTGCAGCTGCCAAAACAAATGGAGTATGCCCACCTCTaGCACGGCATCGCTGCAGACCTGCCCTGCCCGGGC +
Preference number: 3 (lower is better)
Translates to: LQLPKQMEYAHL*HGIAADLPCPG
Trigger: GCCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp AAGTCACACCAGGCCCGCTGCCTCCTTTATTGGTGCTaGCGGTTGGGGGAGCGTGAGTTGGAGCCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: KSHQARCLLYWC*RLGERELEPGL
Trigger: CAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCGGGCCTGGTGTGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR CCA 72 bp CTCCAGCCTGGGAAAGGAGGTGAACCCGTGTCCTTTTaGAGTCCAGGGCAGGCTCCCAGCAAAGCGAGGGGG +
Preference number: 3 (lower is better)
Translates to: LQPGKGGEPVSF*SPGQAPSKARG
Trigger: CCCCCTCGCTTTGCTGGGAGCCTGCCCTGGACTCCAAAAGGACACGGGTTCACCTCCTTTCCCAGGCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp GCCAGGGCCTCTCCCCCTAGTGGAGCGACTGTCCACTaGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGC +
Preference number: 3 (lower is better)
Translates to: ARASPPSGATVH*LSKAALLSCHS
Trigger: GCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGGCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGAGGGGCAGGCAATGTaGTGCGCAGTTACCCAGGGC +
Preference number: 3 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSEGQAM*CAVTQG
Trigger: GCCCTGGGTAACTGCGCACAACATTGCCTGCCCCTC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCATCTCTCCATGTTGGCTaGTTGCCCCTGGGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSSLHVG*LPLGLA
Trigger: GGCCAGCCCCAGGGGCAACAAGCCAACATGGAGAGA...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 72 bp ACCGTGACCAGTGGTGGTCACAGAGGACGTGAACGATaGCGTGGGCCCAGGTCGGAAGCAGCCAGAGCCAGA +
Preference number: 3 (lower is better)
Translates to: TVTSGGHRGRER*RGPRSEAARAR
Trigger: TCTGGCTCTGGCTGCTTCCGACCTGGGCCCACGTCATCGTTCACGTCCTCTGTGACCACCACTGGTCACGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp GTACTGTGGTGTGGGGGAAGCACGGAGTCCCAGTTCTaGGTTCCTGACGCTGATGGGCAGGTGGCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: VLWCGGSTESQF*VPDADGQVAAS
Trigger: AGAGGCAGCCACCTGCCCATCAGCGTCAGGAACGCAGAACTGGGACTCCGTGCTTCCCCCACACCACAGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp TCCAAAGTGCTCACAACGGCTCCTGTGAGACTGCCCTaGTGGGTGCTGGCTGCATGGACACAGCTGCTGCCC +
Preference number: 3 (lower is better)
Translates to: SKVLTTAPVRLP*WVLAAWTQLLP
Trigger: GGGCAGCAGCTGTGTCCATGCAGCCAGCACCCAGCAGGGCAGTCTCACAGGAGCCGTTGTGAGCACTTTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp ATGGAAGCCAGAGACCTACCACAAACAAAGACCTGCTaGCTCCGCCCCTCCTCCCTCCGCCTCGCCTCTGCA +
Preference number: 3 (lower is better)
Translates to: MEARDLPQTKTC*LRPSSLRLASA
Trigger: TGCAGAGGCGAGGCGGAGGGAGGAGGGGCGGAGGCAGCAGGTCTTTGTTTGTGGTAGGTCTCTGGCTTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp CAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTaGGGAGACTCCCAGGCTGATGCTGATGGCGACAGA +
Preference number: 3 (lower is better)
Translates to: QGLQCCSRAMPS*GDSQADADGDR
Trigger: TCTGTCGCCATCAGCATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp CCACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTaGCGCCGAAGACCCAAGGACTGCAGTGCTGCTCAC +
Preference number: 3 (lower is better)
Translates to: PRPHPPLIRVAG*RRRPKDCSAAH
Trigger: GTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp AGGGTGGGGGTGCTGGCCACCTCCCATTTCTTTGCCTaGGTGGTGGTGACCATGGCGCCCTTGTGTCCTTTC +
Preference number: 3 (lower is better)
Translates to: RVGVLATSHFFA*VVVTMAPLCPF
Trigger: GAAAGGACACAAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCCCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp GCTTCTGGAGTCACAGAGCCATTCCCAACCCAGGCCTaGCATGGTCCCTGCCCTTGCATCAGAGTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: ASGVTEPFPTQA*HGPCPCIRVAW
Trigger: CCAGGCCACTCTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTTGGGAATGGCTCTGTGACTCCAGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGACCGTTTCCTGCCGTaGCCCGAGCCCACCAAGTCA +
Preference number: 3 (lower is better)
Translates to: VPALASEWPGRYTHLYRPDRFLP*PEPTKS
Trigger: TGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGAAGCGGCTGACCCGTaGGCTCTTTCTAGAGCGCAG +
Preference number: 3 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSEAADP*ALSRAQ
Trigger: CTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTTC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 72 bp GCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTaGGGGAATGAGACTTTGCCATCAGTCCTCACCAAT +
Preference number: 3 (lower is better)
Translates to: AKRGGGELAARL*GNETLPSVLTN
Trigger: ATTGGTGAGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp TCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGGTGTaGCACACCTTGACTTGGCCTCCAGGCCCAGCTGGA +
Preference number: 3 (lower is better)
Translates to: SLEMRSLPWCVV*HTLTWPPGPAG
Trigger: TCCAGCTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCACACACCAGGGCAAGGACCTCATCTCCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp TCAAACAATGGTGTGTCGGGTGGGGCGGCTCTTCCATaGACCTGTCCCCTGCCTCTGCATGAGCCCAGCAGA +
Preference number: 3 (lower is better)
Translates to: SNNGVSGGAALP*TCPLPLHEPSR
Trigger: TCTGCTGGGCTCATGCAGAGGCAGGGGACAGGTGCATGGAAGAGCCGCCCCACCCGACACACCATTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTTTGCTTGTGTGCATTaGTGGCACTTCCTCTGTGGC +
Preference number: 3 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEFACVH*WHFLCG
Trigger: GCCACAGAGGAAGTGCCACAAATGCACACAAGCAAA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCAGTCCCCGGCAGGTTaGGCCACGCCAGAACTCGGT +
Preference number: 3 (lower is better)
Translates to: PGAHVVGSNLAADGLISTQSPAG*ATPELG
Trigger: ACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGAGGGGCAGGCAATGTaGTGCGCAGTTACCCAGGGC +
Preference number: 3 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQEGQAM*CAVTQG
Trigger: GCCCTGGGTAACTGCGCACAACATTGCCTGCCCCTC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp CCTCAGGAACGTGTCCACCCTGCCCCGGTAGCCCTCTaGTGTCTGCCATCCTGTGTTCACACGGAAAGACAG +
Preference number: 3 (lower is better)
Translates to: PQERVHPAPVAL*CLPSCVHTERQ
Trigger: CTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGGGCAGGGTGGACACGTTCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp GTATTCCTTTTCAGATGCGAGGCCGAGCTGCCAAGCTaGTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCG +
Preference number: 3 (lower is better)
Translates to: VFLFRCEAELPS*YLVPGAQEGSA
Trigger: CGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp CAGGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTaGAGCGTATTCCTTTTCAGATGCGAGGCCGAGCTG +
Preference number: 3 (lower is better)
Translates to: QGAADVGLGPRL*SVFLFRCEAEL
Trigger: CAGCTCGGCCTCGCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp GCCCTTGTGTCCTTTCCATTGGTTACTGAGGACCATTaGCCTCATGGGCCCAGGCCACAGGCACCCACCTGT +
Preference number: 3 (lower is better)
Translates to: ALVSFPLVTEDH*PHGPRPQAPTC
Trigger: ACAGGTGGGTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGGACACAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp GTGGTGGTGACCATGGCGCCCTTGTGTCCTTTCCATTaGTTACTGAGGACCATTGCCCTCATGGGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: VVVTMAPLCPFH*LLRTIALMGPG
Trigger: GCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGGACACAAGGGCGCCATGGTCACCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp GCCTGGCATGGTCCCTGCCCTTGCATCAGAGTGGCCTaGGAGGTACACACATCTTTACAGGCCCAGAAACGC +
Preference number: 3 (lower is better)
Translates to: AWHGPCPCIRVA*EVHTSLQAQKR
Trigger: GCGTTTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGACCATGCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGTTTGCGTGCCATTTTaGTATTCCAACACAGGCCTG +
Preference number: 3 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEVCVPF*YSNTGL
Trigger: CAGGCCTGTGTTGGAATACAAAAATGGCACGCAAAC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGATCAGGGTTGCAGGTaGGCGCCGAAGACCCAAGGA +
Preference number: 3 (lower is better)
Translates to: VATHLSLFPGDEVLALVCDQGCR*APKTQG
Trigger: TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCCATCTGCACAGCAGTTaGACAACTGGGGCGACAGCA +
Preference number: 3 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSHLHSS*TTGATA
Trigger: TGCTGTCGCCCCAGTTGTCAAACTGCTGTGCAGATG...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGTTCGGTGTCTGCTTTaGCAGCTAGGTCGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIVRCLL*QLGRLL
Trigger: GAGGAGCCGACCTAGCTGCAAAAGCAGACACCGAAC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGTTTGCGTGCCATTTTaGTATTCCAACACAGGCCTG +
Preference number: 3 (lower is better)
Translates to: DGELQTLASPQERVHPAPVCVPF*YSNTGL
Trigger: CAGGCCTGTGTTGGAATACAAAAATGGCACGCAAAC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCACAGGTTGATTTGCTaGTGTGCATTTGTGGCACTT +
Preference number: 3 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEHRLIC*CAFVAL
Trigger: AAGTGCCACAAATGCACACAAGCAAATCAACCTGTG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGCTCCATGTTGGCTTGTaGCCCCTGGGGCTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQLHVGL*PLGLAW
Trigger: CCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGAG...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 72 bp GCGCCCACCGTTCCTTACAGGAGCCTCCTCCCATTATaGAATGCCTGGCATCCCAGGAGTGTTCCACTCTCC +
Preference number: 3 (lower is better)
Translates to: APTVPYRSLLPL*NAWHPRSVPLS
Trigger: GGAGAGTGGAACACTCCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCTCCTGTAAGGAACGGTGGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp ATTTCTCACTGTTCTTCTGAGGGGGTGCAGCCTCTCTaGAGGTCACTGTGGAGGGCGCACCAAGGCCTGGAG +
Preference number: 3 (lower is better)
Translates to: ISHCSSEGVQPL*RSLWRAHQGLE
Trigger: CTCCAGGCCTTGGTGCGCCCTCCACAGTGACCTTCAGAGAGGCTGCACCCCCTCAGAAGAACAGTGAGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp CTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATaGGAGGCCGAGCTGCCAAGCTGCTATCTCGTTCCC +
Preference number: 3 (lower is better)
Translates to: LGPRLCSVFLFR*EAELPSCYLVP
Trigger: GGGAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp CCATTCCCAACCCAGGCCTGGCATGGTCCCTGCCCTTaGATCAGAGTGGCCTGGGAGGTACACACATCTTTA +
Preference number: 3 (lower is better)
Translates to: PFPTQAWHGPCP*IRVAWEVHTSL
Trigger: TAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTTGGGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp AGCCAGATGAAGGGCACCTGGCCCCTTCCGCGAGGTTaGAGCATTATGCCAGGAACAGGTGTTCCCTGTACA +
Preference number: 3 (lower is better)
Translates to: SQMKGTWPLPRG*SIMPGTGVPCT
Trigger: TGTACAGGGAACACCTGTTCCTGGCATAATGCTCCAACCTCGCGGAAGGGGCCAGGTGCCCTTCATCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAGACCGTTTCCTGCCGTaGCCCGAGCCCACCAAGTCA +
Preference number: 3 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPDRFLP*PEPTKS
Trigger: TGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTC...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGAGGGGCAGGCAATGTaGTGCGCAGTTACCCAGGGC +
Preference number: 3 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAEGQAM*CAVTQG
Trigger: GCCCTGGGTAACTGCGCACAACATTGCCTGCCCCTC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTAAGGCCTGGAGAGCCTaGGGGAGAGATCAGGCCCCA +
Preference number: 3 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAKAWRA*GRDQAP
Trigger: TGGGGCCTGATCTCTCCCCAAGGCTCTCCAGGCCTT...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 72 bp TCTGGTAGCCACTCACTTGTCCCTGTTCCCTGGAGATaGGGTCCTTGCCCTGGTGTGTGGTGTGACACACCT +
Preference number: 3 (lower is better)
Translates to: SGSHSLVPVPWR*GPCPGVWCDTP
Trigger: AGGTGTGTCACACCACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp AACCTTTTCCGCGCCCTTCACCATTCACTCTGCAAATaGCCAGGGCCTCCAAATCCCGTCCAGCCCCAGGTA +
Preference number: 3 (lower is better)
Translates to: NLFRALHHSLCK*PGPPNPVQPQV
Trigger: TACCTGGGGCTGGACGGGATTTGGAGGCCCTGGTCATTTGCAGAGTGAATGGTGAAGGGCGCGGAAAAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp TTTGCAGCGTATTCCTTTTCAGATGCGAGGCCGAGCTaGCAAGCTGCTATCTCGTTCCCGGAGCACAGGAGG +
Preference number: 3 (lower is better)
Translates to: FAAYSFSDARPS*QAAISFPEHRR
Trigger: CCTCCTGTGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATACGCTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp GAATCAATGGCTGCAGCTGCCAAAACAAATGGAGTATaGCCACCTCTGCCACGGCATCGCTGCAGACCTGCC +
Preference number: 3 (lower is better)
Translates to: ESMAAAAKTNGV*PPLPRHRCRPA
Trigger: GGCAGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGCTGCAGCCATTGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp GAGGGGCAGCTAAGCCACGGCAGTCCCCGGCAGGTTTaGCCACGCCAGAACTCGGTATATGTTTATCTACAT +
Preference number: 3 (lower is better)
Translates to: EGQLSHGSPRQV*PRQNSVYVYLH
Trigger: ATGTAGATAAACATATACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTGCCGTGGCTTAGCTGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCCCTCCGCCTGAGTGTTaGCGTGCCATTTTTGTATTC +
Preference number: 3 (lower is better)
Translates to: VPALASEWPGRYTHLYRPPPPEC*RAIFVF
Trigger: GAATACAAAAATGGCACGCAAACACTCAGGCGGAGG...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCCTCCGCCTGAGTGTTaGCGTGCCATTTTTGTATTC +
Preference number: 3 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHPPPEC*RAIFVF
Trigger: GAATACAAAAATGGCACGCAAACACTCAGGCGGAGG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGCCCCTTCCGCGAGGTaGGAGCATTATGCCAGGAAC +
Preference number: 3 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAAPSAR*EHYARN
Trigger: GTTCCTGGCATAATGCTCCAACCTCGCGGAAGGGGC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp TGGCACTTCCTCTGTGGCCCAAGTGCCAGGATGAGCTaGATCCGTGTCTCATTTAGGAGACATGCACGATGG +
Preference number: 3 (lower is better)
Translates to: WHFLCGPSARMS*IRVSFRRHARW
Trigger: CCATCGTGCATGTCTCCTAAATGAGACACGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGGAAGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp CACCGTTCCTTACAGGAGCCTCCTCCCATTATGAAATaGCTGGCATCCCAGGAGTGTTCCACTCTCCCACAC +
Preference number: 3 (lower is better)
Translates to: HRSLQEPPPIMK*LASQECSTLPH
Trigger: GTGTGGGAGAGTGGAACACTCCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCTCCTGTAAGGAACGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp AGTCCCAGTTCTGCGTTCCTGACGCTGATGGGCAGGTaGCTGCCTCTCCAATGCTTCGATAAACACAACTGG +
Preference number: 3 (lower is better)
Translates to: SPSSAFLTLMGR*LPLQCFDKHNW
Trigger: CCAGTTGTGTTTATCGAAGCATTGGAGAGGCAGCCACCTGCCCATCAGCGTCAGGAACGCAGAACTGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCAGCTGATATGTCTTaGACACACCTGAAAGGAAAC +
Preference number: 3 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSAADMS*THLKGN
Trigger: GTTTCCTTTCAGGTGTGTCAAAGACATATCAGCTGC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp ATTCCTAAAGGGTGCCTCCAGGTAGCAAAGGCCCAATaGCTTTCTCCTCCGCCTGAGTGTTTGCGTGCCATT +
Preference number: 3 (lower is better)
Translates to: IPKGCLQVAKAQ*LSPPPECLRAI
Trigger: AATGGCACGCAAACACTCAGGCGGAGGAGAAAGCCATTGGGCCTTTGCTACCTGGAGGCACCCTTTAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CCA 72 bp GTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATaGAAATCACTAAGTAGGAGACGGAGCCACATCAAG +
Preference number: 3 (lower is better)
Translates to: VVRSYPGQAALE*KSLSRRRSHIK
Trigger: CTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCACAGGTTGATTTGCTaGTGTGCATTTGTGGCACTT +
Preference number: 3 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHHRLIC*CAFVAL
Trigger: AAGTGCCACAAATGCACACAAGCAAATCAACCTGTG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGCAGCTGATATGTCTTaGACACACCTGAAAGGAAAC +
Preference number: 3 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHAADMS*THLKGN
Trigger: GTTTCCTTTCAGGTGTGTCAAAGACATATCAGCTGC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCTCATTTCAAAATGTTaGAACTCTGCCCTTGATATG +
Preference number: 3 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPLISKC*NSALDM
Trigger: CATATCAAGGGCAGAGTTCAAACATTTTGAAATGAG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp ATTTGTGGCACTTCCTCTGTGGCCCAAGTGCCAGGATaGGCTGCATCCGTGTCTCATTTAGGAGACATGCAC +
Preference number: 3 (lower is better)
Translates to: ICGTSSVAQVPG*AASVSHLGDMH
Trigger: GTGCATGTCTCCTAAATGAGACACGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGGAAGTGCCACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR TCA 72 bp AGAAACGCCAAAGGCTGGGAGGCTCTTGTTCTCTGGTaGATCCGGATTCAAGACAGGCTTCGCAAAAGCAGC +
Preference number: 3 (lower is better)
Translates to: RNAKGWEALVLW*IRIQDRLRKSS
Trigger: GCTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCCCAGCCTTTGGCGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp GCCAGGGCAATGTATTCCAGCAGAATGAACACTCTATaGAGGCCCATTCCTAAAGGGTGCCTCCAGGTAGCA +
Preference number: 3 (lower is better)
Translates to: ARAMYSSRMNTL*RPIPKGCLQVA
Trigger: TGCTACCTGGAGGCACCCTTTAGGAATGGGCCTCCATAGAGTGTTCATTCTGCTGGAATACATTGCCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCCCTGATTTGGATAAATaGAGAAGAACAAAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: VPALASEWPGRYTHLYRPPDLDK*RRTKQP
Trigger: GGGCTGCTTTGTTCTTCTCAATTTATCCAAATCAGG...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCCAGTCCCCGGCAGGTTaGGCCACGCCAGAACTCGGT +
Preference number: 3 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFQSPAG*ATPELG
Trigger: ACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTG...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCATTTTTCAGTCCCCAGTaGAGTACTGTGGTGTGGGGG +
Preference number: 3 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPFFSPQ*STVVWG
Trigger: CCCCCACACCACAGTACTCAACTGGGGACTGAAAAA...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACTCATTTCAAAATGTTaGAACTCTGCCCTTGATATG +
Preference number: 3 (lower is better)
Translates to: QAAISFPEHRRALRALWALISKC*NSALDM
Trigger: CATATCAAGGGCAGAGTTCAAACATTTTGAAATGAG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACTCCCATCATCAGCACTaGCTTTTAGCTTCAAGTGTT +
Preference number: 3 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHSHHQH*LLASSV
Trigger: AACACTTGAAGCTAAAAGCAAGTGCTGATGATGGGA...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGCCTGATTTGGATAAATaGAGAAGAACAAAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQPDLDK*RRTKQP
Trigger: GGGCTGCTTTGTTCTTCTCAATTTATCCAAATCAGG...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCACCTCCGCCTGAGTGTTaGCGTGCCATTTTTGTATTC +
Preference number: 3 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPPPPEC*RAIFVF
Trigger: GAATACAAAAATGGCACGCAAACACTCAGGCGGAGG...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCACAGGTTGATTTGCTaGTGTGCATTTGTGGCACTT +
Preference number: 3 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFHRLIC*CAFVAL
Trigger: AAGTGCCACAAATGCACACAAGCAAATCAACCTGTG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGCCTTCCTTTTCCCCCTaGGCTCTGGAAAGGATAAGT +
Preference number: 3 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQPSFSP*ALERIS
Trigger: ACTTATCCTTTCCAGAGCCAAGGGGGAAAAGGAAGG...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp ATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAAGGAGGCAGGCTGCCTTTCAACCATGGTCCACTGTaGCTGGTTGGTAGAAACCTC +
Preference number: 3 (lower is better)
Translates to: ICCVVCPNDTDEGGRLPFNHGPL*LVGRNL
Trigger: GAGGTTTCTACCAACCAGCAACAGTGGACCATGGTT...GAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGACACACAACACAGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR TCA 72 bp AAGCGGCTGACCCGTTGGCTCTTTCTAGAGCGCAGCTaGTATGTCTTTGACACACCTGAAAGGAAACTCCCA +
Preference number: 3 (lower is better)
Translates to: KRLTRWLFLERS*YVFDTPERKLP
Trigger: TGGGAGTTTCCTTTCAGGTGTGTCAAAGACATATCAGCTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp CAAAGGCCCAATGGCTTTCTCCTCCGCCTGAGTGTTTaGGTGCCATTTTTGTATTCCAACACAGGCCTGTCT +
Preference number: 3 (lower is better)
Translates to: QRPNGFLLRLSV*VPFLYSNTGLS
Trigger: AGACAGGCCTGTGTTGGAATACAAAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGCCATTGGGCCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR GCA 72 bp TTGTGTGTCCCAACGATACGGATGAAGGAGGCAGGCTaGCTTTCAAAAGTTACTGACTGCCAGGACTTGCAG +
Preference number: 3 (lower is better)
Translates to: LCVPTIRMKEAG*LSKVTDCQDLQ
Trigger: CTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGACACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR CAA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCCTGATTTGGATAAATaGAGAAGAACAAAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: PGAHVVGSNLAADGLISTPDLDK*RRTKQP
Trigger: GGGCTGCTTTGTTCTTCTCAATTTATCCAAATCAGG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACTCAAATGAGGTCCTTTaGATGAGGATTAGGAGAAAA +
Preference number: 3 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHSNEVL*MRIRRK
Trigger: TTTTCTCCTAATCCTCATCAAAAGGACCTCATTTGA...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCTCATTTCAAAATGTTaGAACTCTGCCCTTGATATG +
Preference number: 3 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHLISKC*NSALDM
Trigger: CATATCAAGGGCAGAGTTCAAACATTTTGAAATGAG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAACTTGTGTCCTTTCCATaGGTTACTGAGGACCATTGC +
Preference number: 3 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKLVSFP*VTEDHC
Trigger: GCAATGGTCCTCAGTAACCAATGGAAAGGACACAAG...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGAAAAAGAAGGTGAAGTaGACTGGGCTGGAGCCATCT +
Preference number: 3 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQKKKVK*TGLEPS
Trigger: AGATGGCTCCAGCCCAGTCAACTTCACCTTCTTTTT...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR GCA 72 bp TGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTaGCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAG +
Preference number: 3 (lower is better)
Translates to: WTQGFRTHGLYI*PLRLLCKMRKK
Trigger: CTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CCA 72 bp ACATTCCACATAGCAGCACAGCCTTTTGGGCATCTTTaGAGTTTTAGACGGAGCTTCTGGAGTCACAGAGCC +
Preference number: 3 (lower is better)
Translates to: TFHIAAQPFGHL*SFRRSFWSHRA
Trigger: GGCTCTGTGACTCCAGAAGCTCCGTCTAAAACTCCAAAGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp ACCAAGTGGCCTCAGTACACAGAACGCTCGCTTTTTATTGTAGATTATACCTTCGTTCGGTGTCTGCTTTaGCAGCTAGGTCGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: TKWPQYTERSLFIVDYTFVRCLL*QLGRLL
Trigger: GAGGAGCCGACCTAGCTGCAAAAGCAGACACCGAAC...GAAGGTATAATCTACAATAAAAAGCGAGCGTTCTGTGTACTGAGGCCACTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTCAAATGAGGTCCTTTaGATGAGGATTAGGAGAAAA +
Preference number: 3 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEISNEVL*MRIRRK
Trigger: TTTTCTCCTAATCCTCATCAAAAGGACCTCATTTGA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGTCAAATGAGGTCCTTTaGATGAGGATTAGGAGAAAA +
Preference number: 3 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQSNEVL*MRIRRK
Trigger: TTTTCTCCTAATCCTCATCAAAAGGACCTCATTTGA...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAACAATTTAAAGAGCAATaGAGAAGAGTCCCACATCCA +
Preference number: 3 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEQFKEQ*RRVPHP
Trigger: TGGATGTGGGACTCTTCTCAATTGCTCTTTAAATTG...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGATTTTCTTTTCCTCTTaGACACCTTTCTTCCCTGTC +
Preference number: 3 (lower is better)
Translates to: PGAHVVGSNLAADGLISTIFFSS*TPFFPV
Trigger: GACAGGGAAGAAAGGTGTCAAAGAGGAAAAGAAAAT...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTTTTTTCAGTCCCCAGTaGAGTACTGTGGTGTGGGGG +
Preference number: 3 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASFFSPQ*STVVWG
Trigger: CCCCCACACCACAGTACTCAACTGGGGACTGAAAAA...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR-3UTR CAA 90 bp GACACAGTGGAACACCTCATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAACCCAATCATGTACGGTaGTGCCAACTGAACCACAAT +
Preference number: 3 (lower is better)
Translates to: DTVEHLICCVVCPNDTDEPNHVR*CQLNHN
Trigger: ATTGTGGTTCAGTTGGCACAACCGTACATGATTGGG...TTCATCCGTATCGTTGGGACACACAACACAGCAAATGAGGTGTTCCACTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR CAA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCATTTGCTTGTGTGCATTaGTGGCACTTCCTCTGTGGC +
Preference number: 3 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSFACVH*WHFLCG
Trigger: GCCACAGAGGAAGTGCCACAAATGCACACAAGCAAA...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR-3UTR CAA 90 bp GAGGCAGGCTGCCTTTCAAAAGTTACTGACTGCCAGGACTTGCAGGAGACTTTACACAATCAGCAATTGTaGCAACATTCTCCATGGGAA +
Preference number: 3 (lower is better)
Translates to: EAGCLSKVTDCQDLQETLHNQQL*QHSPWE
Trigger: TTCCCATGGAGAATGTTGCAACAATTGCTGATTGTG...TAAAGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR-3UTR CAA 90 bp ATTCTTAGTGTCCCCATTCAGCAAGGCATTTCGGCTCCGACTGACTCCTTCAATTGGCACAATCAGCAATaGTTGCAACATTCTCCATGG +
Preference number: 3 (lower is better)
Translates to: ILSVPIQQGISAPTDSFNWHNQQ*LQHSPW
Trigger: CCATGGAGAATGTTGCAACAATTGCTGATTGTGCCA...ATTGAAGGAGTCAGTCGGAGCCGAAATGCCTTGCTGAATGGGGACACTAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328403.10
3UTR GCA 72 bp GGGCTGTTGTCAGGAAAAATATGCAGAATCAATGGCTaGAGCTGCCAAAACAAATGGAGTATGCCCACCTCT +
Preference number: 3 (lower is better)
Translates to: GLLSGKICRING*SCQNKWSMPTS
Trigger: AGAGGTGGGCATACTCCATTTGTTTTGGCAGCTGCAGCCATTGATTCTGCATATTTTTCCTGACAACAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 72 bp GTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAATaGGGAAGAAGCCGCATCGTGCTCACAAATAATACA +
Preference number: 3 (lower is better)
Translates to: VCTSARLGCSAK*GRSRIVLTNNT
Trigger: TGTATTATTTGTGAGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR TCA 72 bp CTCGGTATATGTTTATCTACATGGACTTCGGAACAGTaGATTAGCAGCGGGCATAGTAACTATTTCCTTGTC +
Preference number: 3 (lower is better)
Translates to: LGICLSTWTSEQ*ISSGHSNYFLV
Trigger: GACAAGGAAATAGTTACTATGCCCGCTGCTAATTCACTGTTCCGAAGTCCATGTAGATAAACATATACCGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTTGCCTGGGTGGTGGTaGCCATGGCGCCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRLPGWW*PWRPCV
Trigger: GACACAAGGGCGCCATGGTCACCACCACCCAGGCAA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGCTGCAGACCTGCCCTaGCCGGGCCGTGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPAADLP*PGRARP
Trigger: AGGTCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGCATCGCTGCAGACCTaGCCTGCCCGGGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEASLQT*PARAVP
Trigger: GGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTGCAGCAGACTGGCCTaGGAGATGCCAGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRCSRLA*EMPGCW
Trigger: CCAGCACCCTGGCATCTCCCAGGCCAGTCTGCTGCA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCCTCCGCCTCGCCTCTaGAACCGGTCTTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRPPPRL*NRSFLQ
Trigger: TTGGAGGAAAGACCGGTTGCAGAGGCGAGGCGGAGG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCATGCACCTGTCCCCTaGCTCTGCATGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRHAPVP*LCMSPA
Trigger: TGCTGGGCTCATGCAGAGGCAGGGGACAGGTGCATG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCAGAGGCCGGAGCTCTaGGGACAGCGGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEQRPEL*GQRRGR
Trigger: CCTGCCCCTCCGCTGTCCCCAGAGCTCCGGCCTCTG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGCCCGGGGCTGGGGGCTaGCAGAGTCAGCAACCATGC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEPGAGG*QSQQPC
Trigger: GCATGGTTGCTGACTCTGTCAGCCCCCAGCCCCGGG...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCGAAGACCCAAGGACTaGAGTGCTGCTCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRRRPKD*SAAHVP
Trigger: TGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGGTTACTGAGGACCATTaGCCTCATGGGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRVTEDH*PHGPRP
Trigger: TGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAAC...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTTGGGGCCAGCACTGTaGAAAGGATGGGTGAGCACG +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRLGPAL*KGWVST
Trigger: CGTGCTCACCCATCCTTTGCACAGTGCTGGCCCCAA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGTCGCAACGCCTCCTCTaGGCCAGGGCCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAESQRLL*ARARAS
Trigger: AGAGGCCCTGGCCCTGGCGCAGAGGAGGCGTTGCGA...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCAGAGGCCGGAGCTCTaGGGACAGCGGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPQRPEL*GQRRGR
Trigger: CCTGCCCCTCCGCTGTCCCCAGAGCTCCGGCCTCTG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 72 bp GAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTaGCCCGAGCCCACCAAGTCACACCAGGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ETPAQGGDRFLP*PEPTKSHQARC
Trigger: GCAGCGGGCCTGGTGTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTCCCAACGATACGGATaGAGGAGGCAGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSQRYG*RRQAAF
Trigger: AAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGAGCCTCCTCCCATTATaGAATGCCTGGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSLLPL*NAWHPR
Trigger: CCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCT...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCCCGGGGCTGGGGGCTaGCAGAGTCAGCAACCATGC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPPGAGG*QSQQPC
Trigger: GCATGGTTGCTGACTCTGTCAGCCCCCAGCCCCGGG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGGGGTGCAGCCTCTCTaGAGGTCACTGTGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPGVQPL*RSLWRA
Trigger: CGCCCTCCACAGTGACCTTCAGAGAGGCTGCACCCC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGCTGCTCACGTGCCATaGCGTCCTGGGGAGACTCCC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEAAHVP*RPGETP
Trigger: GGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGAGGGGACTGGAGGGTTaGAGATGCAGGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGERGLEG*RCRAGQ
Trigger: CTGCCCGGCCCTGCATCTGCAACCCTCCAGTCCCCT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGAGCACAGGAGGGCTCTaGGTGCTCTGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGESTGGL*VLCGQG
Trigger: CCCCTGCCCACAGAGCACGCAGAGCCCTCCTGTGCT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCATCAGGGGCTGTGGTaGAGGAGCAGCCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEHQGLW*RSSHQG
Trigger: GCCCTGGTGGCTGCTCCTGCACCACAGCCCCTGATG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTGGGCGGCCGGGCTGTaGTCCCTGAGGACCTTACTG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPWAAGL*SLRTLL
Trigger: CAGTAAGGTCCTCAGGGAGCACAGCCCGGCCGCCCA...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGCTGACCGGCCAGGCTaGTGTCCCCTGTCCCCGATT +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEADRPG*CPLSPI
Trigger: AATCGGGGACAGGGGACACCAGCCTGGCCGGTCAGC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGGGCTGGCCTGGGCATaGGGGAGCTTATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEGLAWA*GSLSPR
Trigger: TCGGGGAGATAAGCTCCCCCATGCCCAGGCCAGCCC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTCCCATTTCTTTGCCTaGGTGGTGGTGACCATGGCG +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSHFFA*VVVTMA
Trigger: CGCCATGGTCACCACCACCCAGGCAAAGAAATGGGA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCTAGGACTAGGGCACTaGCCGCACCCTCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGELGLGH*PHPQAQ
Trigger: CTGGGCCTGAGGGTGCGGCCAGTGCCCTAGTCCTAG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGAGGAGACAGCAGTCCTaGAGGCCTCACAACATTCAG +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRRRQQS*RPHNIQ
Trigger: CTGAATGTTGTGAGGCCTTCAGGACTGCTGTCTCCT...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGGCCAGGGAGCACCGTaGCCAGTGGTGGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPGQGAP*PVVVTE
Trigger: CTCTGTGACCACCACTGGTCACGGTGCTCCCTGGCC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGAGGAGACCGTTTCCTaGCGTTGCCCGAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEEETVS*RCPSPP
Trigger: TGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGCCCTCCCAGCCACGTaGCAGCCCATCCCATCATCA +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEALPAT*QPIPSS
Trigger: TGATGATGGGATGGGCTGGCACGTGGCTGGGAGGGC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCAGCTACCGGGGAGGATaGAGAGCTGCAGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVSYRGG*RAADPG
Trigger: GCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCT...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTTGGCAACCCGGGGCTaGGGGCTGACAGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGELATRG*GLTESA
Trigger: TGCTGACTCTGTCAGCCCCCAGCCCCGGGTTGCCAA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGAGCTCTCTGGCTAATTaGCAACCCGGGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAESSLAN*QPGAGG
Trigger: GCCCCCAGCCCCGGGTTGCCAATTAGCCAGAGAGCT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGAGGGGGAGGCGAGCTaGCAGCGCGGCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSEGEAS*QRGCEG
Trigger: TCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGGGCTGGCCTGGGCATaGGGGAGCTTATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPGLAWA*GSLSPR
Trigger: TCGGGGAGATAAGCTCCCCCATGCCCAGGCCAGCCC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGGACCATTGCCCTCATaGGCCCAGGCCACAGGCACC +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPGPLPS*AQATGT
Trigger: GGTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGGGCGCACCAAGGCCTaGAGAGCCTTGGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEGRTKA*RALGRD
Trigger: ATCTCTCCCCAAGGCTCTCCAGGCCTTGGTGCGCCC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 72 bp GGTCACTGTGGAGGGCGCACCAAGGCCTGGAGAGCCTaGGGGAGAGATCAGGCCCCACAGACCTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GHCGGRTKAWRA*GRDQAPQTWKL
Trigger: GAGCTTCCAGGTCTGTGGGGCCTGATCTCTCCCCAAGGCTCTCCAGGCCTTGGTGCGCCCTCCACAGTGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGACTCAGCCACACGAGTaGCTATTAACTCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRTQPHE*LLTPVS
Trigger: GGACACTGGAGTTAATAGTCACTCGTGTGGCTGAGT...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCCTGTTCCCTGGAGATaGGGTCCTTGCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPPVPWR*GPCPGV
Trigger: CACACCAGGGCAAGGACCTCATCTCCAGGGAACAGG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGTTGCCTGGGTGGTGGTaGCCATGGCGCCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPLPGWW*PWRPCV
Trigger: GACACAAGGGCGCCATGGTCACCACCACCCAGGCAA...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGACCGTTTCCTGCCGTTaGCCGAGCCCACCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGETVSCR*PSPPSH
Trigger: GTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGCAGTGCTGCTCACGTaGCATGCCGTCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPAVLLT*HAVLGR
Trigger: TCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCACCCAAGGACTGCAGTaGTGCTCACGTGCCATGCCG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPTQGLQ*CSRAMP
Trigger: CGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGT...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGCCTCCCATTATGAAATaGCTGGCATCCCAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRPPIMK*LASQEC
Trigger: ACACTCCTGGGATGCCAGGCATTTCATAATGGGAGG...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACAGGAGGGCTCTGCGTaGTCTGTGGGCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAQEGSA*SVGRGL
Trigger: CAGTCCCCTGCCCACAGAGCACGCAGAGCCCTCCTG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGCCGAGCTGCCAAGCTaGTATCTCGTTCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEAELPS*YLVPGA
Trigger: TGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGGCCCAGGGGAGAAGTaGTCTGTAGGACCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPGPGEK*SVGPAR
Trigger: CCTGGCTGGTCCTACAGAGCACTTCTCCCCTGGGCC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGCCCTCCCAGCCACGTaGCAGCCCATCCCATCATCA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPALPAT*QPIPSS
Trigger: TGATGATGGGATGGGCTGGCACGTGGCTGGGAGGGC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCTCCATGTTGGCTTGTTaGCCCTGGGGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPSMLAC*PWGWPG
Trigger: CCCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGA...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTTACTGGCAGCACCCTaGCCTGCTGACCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVLLAAP*PADPGS
Trigger: GCTTCCAGGGTCAGCAGGGCAGGGTGCTGCCAGTAA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGAGTTGGAGCCTGGGCTaGAGGGTAGTGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGESWSLG*RVVSCH
Trigger: GTGGCAGCTCACTACCCTCCAGCCCAGGCTCCAACT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGAACCCGTGTCCTTTTaGAGTCCAGGGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEEPVSF*SPGQAP
Trigger: GGGAGCCTGCCCTGGACTCCAAAAGGACACGGGTTC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAGGGCTGAGGGCTCTGTaGTGCCCAGGAGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGGLRAL*CPGALP
Trigger: TGGGAGGGCTCCTGGGCACCACAGAGCCCTCAGCCC...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGCCTCCACTCTCTGCTaGGCTGAGGGCTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPASTLC*AEGSVV
Trigger: CACCACAGAGCCCTCAGCCCAGCAGAGAGTGGAGGC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCCCCGACCAGGGGCTTaGCCATGTCTCCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPPRPGA*PCLLHN
Trigger: GTTGTGAAGGAGACATGGCCAAGCCCCTGGTCGGGG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCCCCCGACCAGGGGCTTaGCCATGTCTCCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVPRPGA*PCLLHN
Trigger: GTTGTGAAGGAGACATGGCCAAGCCCCTGGTCGGGG...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGAAGGCCGTGGGGCTTaGGGCCAGCACTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPEGRGA*GQHCAK
Trigger: CTTTGCACAGTGCTGGCCCCAAGCCCCACGGCCTTC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCTGGGTGCAGCAGACTaGCCTGGGAGATGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPLGAAD*PGRCQG
Trigger: ACCCTGGCATCTCCCAGGCCAGTCTGCTGCACCCAG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCAGGTGTGTAGCTCCTaGCTGCAGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPQVCSS*LQGLLH
Trigger: GTGGAGGAGGCCCTGCAGCCAGGAGCTACACACCTG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCCCAATTCCGCTCAGATaGGCACCCTCGCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVPIPLR*APSPSW
Trigger: CCAGGAAGGCGAGGGTGCCCATCTGAGCGGAATTGG...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACTAGGACTAGGGCACTaGCCGCACCCTCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWALGLGH*PHPQAQ
Trigger: CTGGGCCTGAGGGTGCGGCCAGTGCCCTAGTCCTAG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGGCAGAGATCAGAGCTaGGGGGATAGGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPGRDQS*GDRKQL
Trigger: GAGCTGCTTCCTATCCCCTCAGCTCTGATCTCTGCC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCTGGCAGCGCGGCTGTaGGGGAATGAGACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPLAARL*GNETLP
Trigger: TGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCCCTGGTGTGTGGTGTaGCACACCTTGACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEPWCVV*HTLTWP
Trigger: AGGCCAAGTCAAGGTGTGTCACACCACACACCAGGG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGCCTGTTCCCTGGAGATaGGGTCCTTGCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPPVPWR*GPCPGV
Trigger: CACACCAGGGCAAGGACCTCATCTCCAGGGAACAGG...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTTTGCCTGGGTGGTGGTaGCCATGGCGCCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALLPGWW*PWRPCV
Trigger: GACACAAGGGCGCCATGGTCACCACCACCCAGGCAA...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGTCCAGCCCCAGGTATaGCTGGATCCGTGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPVQPQV*LDPCQR
Trigger: TCGCTGACACGGATCCAGTCATACCTGGGGCTGGAC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTGCCTCCTTTATTGGTaGTGCCGGTTGGGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVCLLYW*CRLGER
Trigger: ACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTCACACCAGGCCCGCTaGCTCCTTTATTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVSHQAR*LLYWCC
Trigger: GCAGCACCAATAAAGGAGGCAGCGGGCCTGGTGTGA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGCAAGGACTGCAGTGCTaGTCACGTGCCATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPQGLQC*SRAMPS
Trigger: GGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTG...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCGAAGACCCAAGGACTaGAGTGCTGCTCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPRRPKD*SAAHVP
Trigger: TGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGGAACGTGTCCACCCTaGCCCGGTAGCCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALGTCPP*PGSPLM
Trigger: CATCAGAGGGCTACCGGGGCAGGGTGGACACGTTCC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGGGAGGATGGAGAGCTaGAGACCCTGGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPGRMES*RPWLLL
Trigger: GAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGAGGTCAGCAGCATGCTaGTTCAGGCCAAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAERSAAC*FRPRAS
Trigger: AGAGGCCCTTGGCCTGAAGCAGCATGCTGCTGACCT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCCAAGGTCAGCAGCATaGTGCTTCAGGCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPPRSAA*CFRPRA
Trigger: GGCCCTTGGCCTGAAGCAGCATGCTGCTGACCTTGG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGGAGGGAATGAGACTTTaGCATCAGTCCTCACCAATG +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVREGMRL*HQSSPM
Trigger: CATTGGTGAGGACTGATGGCAAAGTCTCATTCCCTC...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAGGCCCAGGGGAGAAGTaGTCTGTAGGACCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAGPGEK*SVGPAR
Trigger: CCTGGCTGGTCCTACAGAGCACTTCTCCCCTGGGCC...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGTTACTGAGGACCATTaGCCTCATGGGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEVTEDH*PHGPRP
Trigger: TGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAAC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCTGCATGGACACAGCTaGTGCCCAGCACACACCCTA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGELHGHS*CPAHTL
Trigger: TAGGGTGTGTGCTGGGCAGCAGCTGTGTCCATGCAG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGCTGCCACGGCATCGCTaGAGACCTGCCCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQLPRHR*RPALPG
Trigger: CCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAG...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCTCCGCACCCCTCTCTaGGCCACCGCCCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTLRTPL*ATAPLA
Trigger: GGCCAAGGGGGCGGTGGCGCAGAGAGGGGTGCGGAG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000481247.6
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCCTCTGAGACCAAGCTaGGACACAGACGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEPLRPS*DTDASS
Trigger: GGAAGAGGCGTCTGTGTCGCAGCTTGGTCTCAGAGG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATGGGGGAGCGTGAGTTaGAGCCTGGGCTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAWGSVS*SLGWRV
Trigger: TACCCTCCAGCCCAGGCTCCAACTCACGCTCCCCCA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCAGGAGACATGCACGATaGGTCTCTGTCCCCGCAAGC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVRRHAR*VSVPAS
Trigger: GCTTGCGGGGACAGAGACCCATCGTGCATGTCTCCT...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCACGCTGATGGGCAGGTaGCTGCCTCTCCAATGCTTC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVTLMGR*LPLQCF
Trigger: GAAGCATTGGAGAGGCAGCCACCTGCCCATCAGCGT...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACGTGCCATGCCGTCCTaGGGAGACTCCCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWARAMPS*GDSQAD
Trigger: ATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGATCAGGGTTGCAGGTTaGCGCCGAAGACCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEIRVAG*RRRPKD
Trigger: GTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGAT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTGTGCAGGAGCTCTCTaGCTAATTGGCAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGECAGAL*LIGNPG
Trigger: CCCCGGGTTGCCAATTAGCCAGAGAGCTCCTGCACA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACTGTGGGCAGGGGACTaGAGGGTTGCAGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWALWAGD*RVADAG
Trigger: CCCTGCATCTGCAACCCTCCAGTCCCCTGCCCACAG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGCTCTGCGTGCTCTGTaGGCAGGGGACTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALALRAL*AGDWRV
Trigger: AACCCTCCAGTCCCCTGCCCACAGAGCACGCAGAGC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAGCCTCCACTCTCTGCTaGGCTGAGGGCTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAASTLC*AEGSVV
Trigger: CACCACAGAGCCCTCAGCCCAGCAGAGAGTGGAGGC...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGGACCATTGCCCTCATaGGCCCAGGCCACAGGCACC +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSGPLPS*AQATGT
Trigger: GGTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCGAAGGGTGGGGGTGCTaGCCACCTCCCATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVEGWGC*PPPISL
Trigger: CAAAGAAATGGGAGGTGGCCAGCACCCCCACCCTTC...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGGGCCGTGCCCGACCTaGGCATCGCTCGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIGPCPT*ASLGGA
Trigger: AGCTCCTCCGAGCGATGCCCAGGTCGGGCACGGCCC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCTCGGAGCGTCCTCAGTaGTGCAGCCAAGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPSERPQ*CSQEPG
Trigger: TCCTGGCTCTTGGCTGCACCACTGAGGACGCTCCGA...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGGGCCATGAGGCCTCTTaGGGACTATTTCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRGHEAS*GLFQFF
Trigger: AAAGAACTGAAATAGTCCCCAAGAGGCCTCATGGCC...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCCTGAGGGAGATGAGCTaGTGCCGTCCCCTCCCAATT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVLREMS*CRPLPI
Trigger: AATTGGGAGGGGACGGCACCAGCTCATCTCCCTCAG...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCCTGGGAAGACCCCATaGCCTCCAGCAGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPPGKTP*PPAGLR
Trigger: TCTGAGACCTGCTGGAGGCCATGGGGTCTTCCCAGG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTGGGAGTCGAGCTGCTaGCCGGCCAGGCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIWESSC*PARLVS
Trigger: GGACACCAGCCTGGCCGGTCAGCAGCTCGACTCCCA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGCCCCGGTAGCCCTCTaGTGTCTGCCATCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALAPVAL*CLPSCV
Trigger: AACACAGGATGGCAGACATCAGAGGGCTACCGGGGC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCAGCCTCCTCCCATTATaGAATGCCTGGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPSLLPL*NAWHPR
Trigger: CCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCT...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCGCGGCTGTGAGGGAATaGGACTTTGCCATCAGTCCT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVAAVRE*DFAISP
Trigger: AGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGC...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTTGGTGTGACACACCTTaGCTTGGCCTCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALWCDTP*LGLQAQ
Trigger: CTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCA...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTCAAAAGTTACTGACTaGCAGGACTTGCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSKVTD*QDLQET
Trigger: AGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGCTCCTTTATTGGTGCTaGCGGTTGGGGGAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPLLYWC*RLGERE
Trigger: CTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAG...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCCCCATTCCTAAAGGGTaGCTCCAGGTAGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVPIPKG*LQVAKA
Trigger: GGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGG...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGTCCTTTGATCAGGGTTaGAGGTTGGCGCCGAAGACC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAESFDQG*RLAPKT
Trigger: GGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGA...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTCCTTTGATCAGGGTTaGAGGTTGGCGCCGAAGACC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGESFDQG*RLAPKT
Trigger: GGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGAGGTCAGCAGCATGCTaGTTCAGGCCAAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPRSAAC*FRPRAS
Trigger: AGAGGCCCTTGGCCTGAAGCAGCATGCTGCTGACCT...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGATGCGAGGCCGAGCTaGCAAGCTGCTATCTCGTTC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPDARPS*QAAISF
Trigger: GAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGAGATCTGGAAGGGCATaGCCCGAAGGAAAGAACCGC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAERSGRA*PEGKNR
Trigger: GCGGTTCTTTCCTTCGGGGCATGCCCTTCCAGATCT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCCACGAAAAGAGTTCCTaGCCCAGTCAGAAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVHEKSS*PSQKAP
Trigger: AGGGGCCTTCTGACTGGGGCAGGAACTCTTTTCGTG...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGACCCTCCCCAGAGCTaGCAGAAGGTGACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPDPPQS*QKVTLK
Trigger: CTTCAAAGTCACCTTCTGGCAGCTCTGGGGAGGGTC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCAGCACACACCCTACCTaGCCTACACTCTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPSTHPT*PTLSVH
Trigger: GTGGACTGAGAGTGTAGGGCAGGTAGGGTGTGTGCT...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGCATGGACACAGCTGCTaGCCAGCACACACCCTACCT +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPHGHSC*PAHTLP
Trigger: AGGTAGGGTGTGTGCTGGGCAGCAGCTGTGTCCATG...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTAGGGAGATGAGCTGGTaGCGTCCCCTCCCAATTCCG +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALREMSW*RPLPIP
Trigger: CGGAATTGGGAGGGGACGGCACCAGCTCATCTCCCT...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTCAAAGTGGACACAGTaGAACACCTCATTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSKWTQ*NTSFAV
Trigger: CACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGCTGACCGGCCAGGCTaGTGTCCCCTGTCCCCGATT +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPADRPG*CPLSPI
Trigger: AATCGGGGACAGGGGACACCAGCCTGGCCGGTCAGC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGACGCTGATGGGCAGGTaGCTGCCTCTCCAATGCTTC +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPTLMGR*LPLQCF
Trigger: GAAGCATTGGAGAGGCAGCCACCTGCCCATCAGCGT...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGAGAGCTGCAGACCCTaGCTTCTCCTCAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPESCRP*LLLRNV
Trigger: CACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCTTGGCAACCCGGGGCTaGGGGCTGACAGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSLATRG*GLTESA
Trigger: TGCTGACTCTGTCAGCCCCCAGCCCCGGGTTGCCAA...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGTGTGCAGGAGCTCTCTaGCTAATTGGCAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPCAGAL*LIGNPG
Trigger: CCCCGGGTTGCCAATTAGCCAGAGAGCTCCTGCACA...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTCTGCGTGCTCTGTaGGCAGGGGACTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSALRAL*AGDWRV
Trigger: AACCCTCCAGTCCCCTGCCCACAGAGCACGCAGAGC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGTGAGACTGCCCTGCTaGGTGCTGGCTGCATGGACA +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALVRLPC*VLAAWT
Trigger: TGTCCATGCAGCCAGCACCCAGCAGGGCAGTCTCAC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATCGGAGCGTCCTCAGTaGTGCAGCCAAGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWASERPQ*CSQEPG
Trigger: TCCTGGCTCTTGGCTGCACCACTGAGGACGCTCCGA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCTAGCTGGAAGGCCGTaGGGCTTGGGGCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHLAGRP*GLGPAL
Trigger: CAGTGCTGGCCCCAAGCCCCACGGCCTTCCAGCTAG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCAATGGTGTGTCGGGTaGGGCGGCTCTTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALQWCVG*GGSSMH
Trigger: GTGCATGGAAGAGCCGCCCCACCCGACACACCATTG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCCCCTTCCGCGAGGTTaGAGCATTATGCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEPLPRG*SIMPGT
Trigger: TGTTCCTGGCATAATGCTCCAACCTCGCGGAAGGGG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTAGCCTGGCTTCTGACTaGAAGCTCGCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALSLASD*KLAGCS
Trigger: GCTGCACCCAGCGAGCTTCCAGTCAGAAGCCAGGCT...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACAGGTGTGTAGCTCCTaGCTGCAGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSQVCSS*LQGLLH
Trigger: GTGGAGGAGGCCCTGCAGCCAGGAGCTACACACCTG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGCTGGGGCTCATGTGGTaGGGAGCAATTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPLGLMW*GAIWQQ
Trigger: CTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAG...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGCCCTTGCATCAGAGTaGCCTGGGAGGTACACACAT +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEALASE*PGRYTH
Trigger: ATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAAACCCAGGCCTGGCATaGTCCCTGCCCTTGCATCAG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWANPGLA*SLPLHQ
Trigger: CTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTT...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 72 bp CCCACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTaGGCGCCGAAGACCCAAGGACTGCAGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PTPSPSFDQGCR*APKTQGLQCCS
Trigger: TGAGCAGCACTGCAGTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGGGAAATCCATATTTATaGGCCAGGCTCAAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRGNPYL*ARLKKS
Trigger: GGACTTTTTGAGCCTGGCTCATAAATATGGATTTCC...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGAGGAGACAGCAGTCCTaGAGGCCTCACAACATTCAG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGERRQQS*RPHNIQ
Trigger: CTGAATGTTGTGAGGCCTTCAGGACTGCTGTCTCCT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGCTTTCTCCTCCGCCTaGGTGTTTGCGTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPAFSSA*VFACHF
Trigger: AAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCCCGGGGCTGGGGGCTaGCAGAGTCAGCAACCATGC +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTPGAGG*QSQQPC
Trigger: GCATGGTTGCTGACTCTGTCAGCCCCCAGCCCCGGG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCATGGTGTGACACACCTTaGCTTGGCCTCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSWCDTP*LGLQAQ
Trigger: CTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCA...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGATCTGCACAGCAGTTTaGCAACTGGGGCGACAGCAT +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEICTAV*QLGRQH
Trigger: ATGCTGTCGCCCCAGTTGTCAAACTGCTGTGCAGAT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGCTCTTTCCTCCTCCCTaGTGGAAGCCAGAGACCTAC +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPLFPPP*WKPETY
Trigger: GTAGGTCTCTGGCTTCCATCAGGGAGGAGGAAAGAG...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGGACCAGGGAGCGTGTaGTGGAGAGATTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPGPGSV*WRDFSL
Trigger: CAGTGAGAAATCTCTCCATCACACGCTCCCTGGTCC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGCTTCCTCCTGTTCCCTaGGCCTGGGCTAGATTAGAG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPLPPVP*AWARLE
Trigger: CTCTAATCTAGCCCAGGCGCAGGGAACAGGAGGAAG...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACCTCTGTGGCCCAAGTaGCAGGATGAGCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSPLWPK*QDELHP
Trigger: CGGATGCAGCTCATCCTGGCACTTGGGCCACAGAGG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTACGGAGTCCCAGTTCTaGGTTCCTGACGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALTESQF*VPDADG
Trigger: CCCATCAGCGTCAGGAACGCAGAACTGGGACTCCGT...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAGGGAGGATGGAGAGCTaGAGACCCTGGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGGRMES*RPWLLL
Trigger: GAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCC...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGAAGCAGCTCAGCCCTaGAGCTGGAGCTACCGGGGA +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPEAAQP*SWSYRG
Trigger: TCCCCGGTAGCTCCAGCTGCAGGGCTGAGCTGCTTC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCAGGAGGGCTCTGCGTaGTCTGTGGGCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNQEGSA*SVGRGL
Trigger: CAGTCCCCTGCCCACAGAGCACGCAGAGCCCTCCTG...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGAGCACAGGAGGGCTCTaGGTGCTCTGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQSTGGL*VLCGQG
Trigger: CCCCTGCCCACAGAGCACGCAGAGCCCTCCTGTGCT...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGATCTGGAAGGGCATaGCCCGAAGGAAAGAACCGC +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPRSGRA*PEGKNR
Trigger: GCGGTTCTTTCCTTCGGGGCATGCCCTTCCAGATCT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGCATCGCTGCAGACCTaGCCTGCCCGGGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAASLQT*PARAVP
Trigger: GGGCACGGCCCGGGCAGGGCAGGTCTGCAGCGATGC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGAGTATGCCCACCTCTaGCACGGCATCGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSEYAHL*HGIAAD
Trigger: GTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACAAACAAAGACCTGCTaGCTCCGCCCCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGQTKTC*LRPSSL
Trigger: GAGGGAGGAGGGGCGGAGGCAGCAGGTCTTTGTTTG...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTGTGTAGCTCCTGGCTaGAGGGCCTCCTCCACCCCC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEICVAPG*RASSTP
Trigger: GGGGGTGGAGGAGGCCCTGCAGCCAGGAGCTACACA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACAGACCTGGAAGCTCTaGCCCAGTATCCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSQTWKL*PSIPQP
Trigger: AGGCTGGGGGATACTGGGGCAGAGCTTCCAGGTCTG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTCCCCCTTTACAACTTaGGCTCCATACTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRSPFTT*APYFIV
Trigger: AACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACGCTGCCTCCTTTATTaGTGCTGCCGGTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSRCLLY*CCRLGE
Trigger: CTCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGCTTGTGTGCATTTGTaGCACTTCCTCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPACVHL*HFLCGP
Trigger: TGGGCCACAGAGGAAGTGCCACAAATGCACACAAGC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGCTTGTGTGCATTTGTaGCACTTCCTCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEACVHL*HFLCGP
Trigger: TGGGCCACAGAGGAAGTGCCACAAATGCACACAAGC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTATCAGGGTTGCAGGTTaGCGCCGAAGACCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALIRVAG*RRRPKD
Trigger: GTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGAT...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGAGAGCTGCAGACCCTaGCTTCTCCTCAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALESCRP*LLLRNV
Trigger: CACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGCTACCGGGGAGGATaGAGAGCTGCAGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPSYRGG*RAADPG
Trigger: GCCAGGGTCTGCAGCTCTCCATCCTCCCCGGTAGCT...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAGGAGGGACAGAGATCTaGAAGGGCATGCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSGGTEI*KGMPRR
Trigger: CCTTCGGGGCATGCCCTTCCAGATCTCTGTCCCTCC...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGATCGCTTTGGTCCTGGTaGCCCAGGGGAGAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGSLWSW*PRGEVL
Trigger: GAGCACTTCTCCCCTGGGCCACCAGGACCAAAGCGA...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATGGGACATAAACCCCTaGGGCTCATGTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAWDINP*GSCGGE
Trigger: CTCCCCACCACATGAGCCCCAGGGGTTTATGTCCCA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACCTGGGAAGACCCCATaGCCTCCAGCAGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGPGKTP*PPAGLR
Trigger: TCTGAGACCTGCTGGAGGCCATGGGGTCTTCCCAGG...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGAAGGGGCGAAGAGGGTaGCTGTTACTCATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEKGRRG*LLLILW
Trigger: CCACAAGATGAGTAACAGCCACCCTCTTCGCCCCTT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
3UTR CAA 72 bp TCCAGGCTGCCCGGGGACTTTCTGGTAGCCACTCACTaGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SRLPGDFLVATH*SLFPGDEVLAL
Trigger: CAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTACCAGAAAGTCCCCGGGCAGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGCATGCCTCTATAATTaGGGTCCATATCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEACLYN*GPYPGS
Trigger: AGAGCCGGGATATGGACCTCAATTATAGAGGCATGC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCGCATGCCTCTATAATTaGGGTCCATATCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPACLYN*GPYPGS
Trigger: AGAGCCGGGATATGGACCTCAATTATAGAGGCATGC...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCGCATGCCTCTATAATTaGGGTCCATATCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVACLYN*GPYPGS
Trigger: AGAGCCGGGATATGGACCTCAATTATAGAGGCATGC...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTACGGTTGTGCCAACTaGACCACAATCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEYGCAN*TTIAPL
Trigger: AAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGATCCATGTCAGGAATaGCAGGTGAGTAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEDPCQE*QVSNSA
Trigger: GGCTGAGTTACTCACCTGTCATTCCTGACATGGATC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGCCCTCACCCTCCTTTaGTCAGGGTTGCAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPALTLL*SGLQVG
Trigger: GCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGCCTGGGAAAGGAGGTaGACCCGTGTCCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSAWERR*TRVLLE
Trigger: CTCCAAAAGGACACGGGTTCACCTCCTTTCCCAGGC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTTCACAACGGCTCCTGTaGGACTGCCCTGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPSQRLL*DCPAGC
Trigger: GCACCCAGCAGGGCAGTCTCACAGGAGCCGTTGTGA...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACAGAGGACGTGAACGATaGCGTGGGCCCAGGTCGGAA +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHRGRER*RGPRSE
Trigger: TTCCGACCTGGGCCCACGTCATCGTTCACGTCCTCT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCGGGGTGCAGCCTCTCTaGAGGTCACTGTGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFGVQPL*RSLWRA
Trigger: CGCCCTCCACAGTGACCTTCAGAGAGGCTGCACCCC...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGCTCTCTTGGGCTCATaGGGCTGTAGAATGCAGTGT +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPALLGS*GCRMQC
Trigger: ACACTGCATTCTACAGCCTCATGAGCCCAAGAGAGC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649492.1
CDS-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGTTTCCTCCTTCTGGCTaGTCTGCTGCTCTGGACACT +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPFPPSG*SAALDT
Trigger: AGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAA...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACTCCTTTATTGGTGCTaGCGGTTGGGGGAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGLLYWC*RLGERE
Trigger: CTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAG...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCACCGTTTCCTGCCGTTaGCCGAGCCCACCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPTVSCR*PSPPSH
Trigger: GTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGT...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGAGTGCCAGGATGAGCTaGATCCGTGTCTCATTTAGG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGESARMS*IRVSFR
Trigger: CCTAAATGAGACACGGATGCAGCTCATCCTGGCACT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGAAAGCTTCTTGGAACTaGTATTTTTCAGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRKASWN*YFSVPS
Trigger: ACTGGGGACTGAAAAATAGCAGTTCCAAGAAGCTTT...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGCAGTGCTGCTCACGTaGCATGCCGTCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNAVLLT*HAVLGR
Trigger: TCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGCAGTGCTGCTCACGTaGCATGCCGTCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIAVLLT*HAVLGR
Trigger: TCTCCCCAGGACGGCATGGCACGTGAGCAGCACTGC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGAAGCAGCTCAGCCCTaGAGCTGGAGCTACCGGGGA +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIEAAQP*SWSYRG
Trigger: TCCCCGGTAGCTCCAGCTGCAGGGCTGAGCTGCTTC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCAGGGGACTGGAGGGTTaGAGATGCAGGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFRGLEG*RCRAGQ
Trigger: CTGCCCGGCCCTGCATCTGCAACCCTCCAGTCCCCT...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCAGGAGGGCTCTGCGTaGTCTGTGGGCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTQEGSA*SVGRGL
Trigger: CAGTCCCCTGCCCACAGAGCACGCAGAGCCCTCCTG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGTATTCCTTTTCAGATaGGAGGCCGAGCTGCCAAGC +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPVFLFR*EAELPS
Trigger: GCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATAC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCACGAAAAGAGTTCCTaGCCCAGTCAGAAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALHEKSS*PSQKAP
Trigger: AGGGGCCTTCTGACTGGGGCAGGAACTCTTTTCGTG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATTCCATGTTGGCTTGTTaGCCCTGGGGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNSMLAC*PWGWPG
Trigger: CCCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGA...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGACCCTCCCCAGAGCTaGCAGAAGGTGACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALDPPQS*QKVTLK
Trigger: CTTCAAAGTCACCTTCTGGCAGCTCTGGGGAGGGTC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACTGCATGGACACAGCTaGTGCCCAGCACACACCCTA +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSLHGHS*CPAHTL
Trigger: TAGGGTGTGTGCTGGGCAGCAGCTGTGTCCATGCAG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGGGGTGGTTCATAGCTaGTTCAAGTCCAAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEGVVHS*FKSKVL
Trigger: GAGCACTTTGGACTTGAAGCAGCTATGAACCACCCC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCACTGCCACGGCATCGCTaGAGACCTGCCCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPLPRHR*RPALPG
Trigger: CCCGGGCAGGGCAGGTCTGCAGCGATGCCGTGGCAG...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGAGCGTCCTCAGTGGTaGAGCCAAGAGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHERPQW*SQEPGR
Trigger: CCTTCCTGGCTCTTGGCTGCACCACTGAGGACGCTC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCATGCACCTGTCCCCTaGCTCTGCATGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHHAPVP*LCMSPA
Trigger: TGCTGGGCTCATGCAGAGGCAGGGGACAGGTGCATG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGAGGTTGGAGCATTATaGCAGGAACAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEEVGAL*QEQVFP
Trigger: AGGGAACACCTGTTCCTGGCATAATGCTCCAACCTC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCCGCTTAGGTTGCTCTaGAAAATGAGGAAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPPLRLL*KMRKKP
Trigger: CGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTTGGGGGAGCGTGAGTTaGAGCCTGGGCTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCWGSVS*SLGWRV
Trigger: TACCCTCCAGCCCAGGCTCCAACTCACGCTCCCCCA...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACATTGGTGCTGCCGGTTaGGGGAGCGTGAGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHIGAAG*GSVSWS
Trigger: GCTCCAACTCACGCTCCCCCAACCGGCAGCACCAAT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCCGTGCCATGCCGTCCTaGGGAGACTCCCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIRAMPS*GDSQAD
Trigger: ATCAGCCTGGGAGTCTCCCCAGGACGGCATGGCACG...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATTTGGCAACCCGGGGCTaGGGGCTGACAGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNLATRG*GLTESA
Trigger: TGCTGACTCTGTCAGCCCCCAGCCCCGGGTTGCCAA...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTCCTTTGTCCCCATCTaGGTAGAAAACACACTGGGG +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVSFVPI*VENTLG
Trigger: CCCCAGTGTGTTTTCTACCCAGATGGGGACAAAGGA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGCTGTGGGCAGGGGACTaGAGGGTTGCAGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQLWAGD*RVADAG
Trigger: CCCTGCATCTGCAACCCTCCAGTCCCCTGCCCACAG...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGCTCTGCGTGCTCTGTaGGCAGGGGACTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNALRAL*AGDWRV
Trigger: AACCCTCCAGTCCCCTGCCCACAGAGCACGCAGAGC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGAACCCGTGTCCTTTTaGAGTCCAGGGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPEPVSF*SPGQAP
Trigger: GGGAGCCTGCCCTGGACTCCAAAAGGACACGGGTTC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGCCTCCACTCTCTGCTaGGCTGAGGGCTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQASTLC*AEGSVV
Trigger: CACCACAGAGCCCTCAGCCCAGCAGAGAGTGGAGGC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCGGACCATTGCCCTCATaGGCCCAGGCCACAGGCACC +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFGPLPS*AQATGT
Trigger: GGTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCC...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGTGCCCTGCTGGGTGCTaGCTGCATGGACACAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQCPAGC*LHGHSC
Trigger: GCAGCTGTGTCCATGCAGCCAGCACCCAGCAGGGCA...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGAAGGTGAAGTTGACTaGGCTGGAGCCATCTGCACA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPEGEVD*AGAICT
Trigger: TGTGCAGATGGCTCCAGCCCAGTCAACTTCACCTTC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAGCACTGTGCAAAGGATaGGTGAGCACGCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGALCKG*VSTLSL
Trigger: GAGGGACAGCGTGCTCACCCATCCTTTGCACAGTGC...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTGAAGGCCGTGGGGCTTaGGGCCAGCACTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPEGRGA*GQHCAK
Trigger: CTTTGCACAGTGCTGGCCCCAAGCCCCACGGCCTTC...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAACTAGCTGGAAGGCCGTaGGGCTTGGGGCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPELAGRP*GLGPAL
Trigger: CAGTGCTGGCCCCAAGCCCCACGGCCTTCCAGCTAG...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGAGAAACGCCAAAGGCTaGGAGGCTCTTGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPRNAKG*EALVLW
Trigger: CCAGAGAACAAGAGCCTCCCAGCCTTTGGCGTTTCT...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTTTAGACGGAGCTTCTaGAGTCACAGAGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVFRRSF*SHRAIP
Trigger: GGGAATGGCTCTGTGACTCCAGAAGCTCCGTCTAAA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGACTCTCCTGTCCCTTTaGAGCTGCAATGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPTLLSL*SCNGHS
Trigger: ACTGTGGCCATTGCAGCTCCAAAGGGACAGGAGAGT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649492.1
3UTR CAA 72 bp GGTGGTGGTGACCATGGCGCCCTTGTGTCCTTTCCATaGGTTACTGAGGACCATTGCCCTCATGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGGDHGALVSFP*VTEDHCPHGPR
Trigger: CCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGGACACAAGGGCGCCATGGTCACCACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 72 bp GAGCCAGATGAAGGGCACCTGGCCCCTTCCGCGAGGTaGGAGCATTATGCCAGGAACAGGTGTTCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: EPDEGHLAPSAR*EHYARNRCSLY
Trigger: GTACAGGGAACACCTGTTCCTGGCATAATGCTCCAACCTCGCGGAAGGGGCCAGGTGCCCTTCATCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GCCTCCTTTATTGGTGCTGCCGGTTGGGGGAGCGTGAGTTGGAGCCTGGGCTGGATTTCTGCTTCAGGCTaGGACTCTCGCATTCCACCA +
Preference number: 4 (lower is better)
Translates to: ASFIGAAGWGSVSWSLGWISASG*DSRIPP
Trigger: TGGTGGAATGCGAGAGTCTCAGCCTGAAGCAGAAAT...CCAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACATTTCGGCTCCGACTaGCTCCTTCAATCACACTGG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAHFGSD*LLQSHW
Trigger: CCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAATG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAATGGGAGTCGAGCTGCTaGCCGGCCAGGCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKWESSC*PARLVS
Trigger: GGACACCAGCCTGGCCGGTCAGCAGCTCGACTCCCA...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCCATTTTCTCCCCCTTaGGACCTGCCTGATTTGGAT +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPPFSPP*DLPDLD
Trigger: ATCCAAATCAGGCAGGTCTCAAGGGGGAGAAAATGG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGTGTATTCCAGCAGAATaGACACTCTATGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAECIPAE*TLYGGP
Trigger: TGGGCCTCCATAGAGTGTTCATTCTGCTGGAATACA...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCCCAGTGTCCACAGGTTaGTTTGCTTGTGTGCATTTG +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPPVSTG*FACVHL
Trigger: CAAATGCACACAAGCAAATCAACCTGTGGACACTGG...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCCAGTGTCCACAGGTTaGTTTGCTTGTGTGCATTTG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEPVSTG*FACVHL
Trigger: CAAATGCACACAAGCAAATCAACCTGTGGACACTGG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGACTCAGCCACACGAGTaGCTATTAACTCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPTQPHE*LLTPVS
Trigger: GGACACTGGAGTTAATAGTCACTCGTGTGGCTGAGT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGGCAGAGATCAGAGCTaGGGGGATAGGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHGRDQS*GDRKQL
Trigger: GAGCTGCTTCCTATCCCCTCAGCTCTGATCTCTGCC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAAGCCTCCTCCCATTATaGAATGCCTGGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGSLLPL*NAWHPR
Trigger: CCTGGGATGCCAGGCATTTCATAATGGGAGGAGGCT...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTTTGAACTCTGCCCTTaGTATGACTGTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVFELCP*YDCLAP
Trigger: AGGAGCCAGACAGTCATATCAAGGGCAGAGTTCAAA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTTGGTGTGACACACCTTaGCTTGGCCTCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCWCDTP*LGLQAQ
Trigger: CTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCA...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCTTTCCATTGGTTACTaGGGACCATTGCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPLSIGY*GPLPSW
Trigger: CCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTTGTGCAAAGGATGGGTaGGCACGCTGTCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPCAKDG*ARCPSE
Trigger: CTCCGAGGGACAGCGTGCTCACCCATCCTTTGCACA...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACAAGAAGACACGAAGCTaGTGGGGCAGGAGGGCCGTT +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHKKTRS*WGRRAV
Trigger: AACGGCCCTCCTGCCCCATCAGCTTCGTGTCTTCTT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTATCAACGTCTCCAGTaGCCCAGGGCCCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIYQRLQ*PRAQSL
Trigger: CAGGGACTGGGCCCTGGGTCACTGGAGACGTTGATA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTCCAGCGATGCTCCTCTaGGACCAAGCTGCGACACAG +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPPAMLL*DQAATQ
Trigger: CTGTGTCGCAGCTTGGTCTCAGAGGAGCATCGCTGG...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481247.6
CDS-3UTR GCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATCCTTCTGGCTGCTCTaGTGCTCTGGACACTCAAAG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWASFWLL*CSGHSK
Trigger: CTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCCTCCTTTATTGGTGCTaGCGGTTGGGGGAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPLLYWC*RLGERE
Trigger: CTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAG...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGAGGAGACCGTTTCCTaGCGTTGCCCGAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCEETVS*RCPSPP
Trigger: TGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGGGAGGATGGAGAGCTaGAGACCCTGGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQGRMES*RPWLLL
Trigger: GAGGAGAAGCCAGGGTCTGCAGCTCTCCATCCTCCC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGCCGAGCTGCCAAGCTaGTATCTCGTTCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQAELPS*YLVPGA
Trigger: TGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGCTAGGGCCGAGGCTTTaGAGCGTATTCCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPLGPRL*SVFLFR
Trigger: TCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAG...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGACACGAAAAGAGTTCCTaGCCCAGTCAGAAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGHEKSS*PSQKAP
Trigger: AGGGGCCTTCTGACTGGGGCAGGAACTCTTTTCGTG...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGGCCCAGGGGAGAAGTaGTCTGTAGGACCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEGPGEK*SVGPAR
Trigger: CCTGGCTGGTCCTACAGAGCACTTCTCCCCTGGGCC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACACCTCCCATTTCTTTaGCTGGGTGGTGGTGACCAT +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAHLPFL*LGGGDH
Trigger: ATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACCTGTCCCCTGCCTCTaGATGAGCCCAGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSPVPCL*MSPAEN
Trigger: ATTTTCTGCTGGGCTCATGCAGAGGCAGGGGACAGG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTAGGGAGATGAGCTGGTaGCGTCCCCTCCCAATTCCG +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCREMSW*RPLPIP
Trigger: CGGAATTGGGAGGGGACGGCACCAGCTCATCTCCCT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACACGGTTTGTACATCTaGCCGCTTAGGTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAHGLYI*PLRLLC
Trigger: GCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCATCAATTTCCCCCACTaGAGTAAAGGGGCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPINFPH*SKGAKR
Trigger: CCTCTTCGCCCCTTTACTGCAGTGGGGGAAATTGAT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGCAGGCTCCCAGCAAAGCGAGGGGGAGGCGAGCTGGCAGCGCGGCTGTGAGGTGCAATGTTTTCTTCTaGTATGAGCATGCCTCTATA +
Preference number: 4 (lower is better)
Translates to: GQAPSKARGRRAGSAAVRCNVFF*YEHASI
Trigger: TATAGAGGCATGCTCATACCAGAAGAAAACATTGCA...CCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTCGCTTTGCTGGGAGCCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGATGGTCCACTGTTGCTaGTTGGTAGAAACCTCAACG +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEMVHCC*LVETST
Trigger: CGTTGAGGTTTCTACCAACCAGCAACAGTGGACCAT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGAGTTGGAGCCTGGGCTaGAGGGTAGTGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQSWSLG*RVVSCH
Trigger: GTGGCAGCTCACTACCCTCCAGCCCAGGCTCCAACT...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCAGTTGGAGCCTGGGCTaGAGGGTAGTGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEISWSLG*RVVSCH
Trigger: GTGGCAGCTCACTACCCTCCAGCCCAGGCTCCAACT...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCCCAAGCTTAAAGGCTaGATCCATGTCAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEPKLKG*IHVRND
Trigger: GTCATTCCTGACATGGATCCAGCCTTTAAGCTTGGG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGATTGAGTACTGTGGTGTaGGGGAAGCACGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGLSTVV*GKHGVP
Trigger: TGGGACTCCGTGCTTCCCCCACACCACAGTACTCAA...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGAGGTCGCTTTGGTCCTaGTGGCCCAGGGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQRSLWS*WPRGEV
Trigger: CACTTCTCCCCTGGGCCACCAGGACCAAAGCGACCT...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGGGCTGAGGGCTCTGTaGTGCCCAGGAGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAGLRAL*CPGALP
Trigger: TGGGAGGGCTCCTGGGCACCACAGAGCCCTCAGCCC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGCCCCGACCAGGGGCTTaGCCATGTCTCCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQPRPGA*PCLLHN
Trigger: GTTGTGAAGGAGACATGGCCAAGCCCCTGGTCGGGG...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACATGAAAAGTGAAGGGTaGGGGTGCTGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHMKSEG*GCWPPP
Trigger: GGGAGGTGGCCAGCACCCCCACCCTTCACTTTTCAT...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTGTGAGACTGCCCTGCTaGGTGCTGGCTGCATGGACA +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPVRLPC*VLAAWT
Trigger: TGTCCATGCAGCCAGCACCCAGCAGGGCAGTCTCAC...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCGGGCCGTGCCCGACCTaGGCATCGCTCGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSGPCPT*ASLGGA
Trigger: AGCTCCTCCGAGCGATGCCCAGGTCGGGCACGGCCC...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCAGCCCCAGGTATGACTaGATCCGTGTCAGCGAGAGA +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSSPRYD*IRVSER
Trigger: TCTCTCGCTGACACGGATCCAGTCATACCTGGGGCT...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACCCCTTCCGCGAGGTTaGAGCATTATGCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSPLPRG*SIMPGT
Trigger: TGTTCCTGGCATAATGCTCCAACCTCGCGGAAGGGG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGAGGGCCGTTCAGCCTaGCTTCTGACTGGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIEGRSA*LLTGSS
Trigger: CGAGCTTCCAGTCAGAAGCCAGGCTGAACGGCCCTC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGGAGCGACTGTCCACTaGCTTTCAAAGGCGGCACTC +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHGATVH*LSKAAL
Trigger: GAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCTGGGACATAAACCCCTaGGGCTCATGTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPWDINP*GSCGGE
Trigger: CTCCCCACCACATGAGCCCCAGGGGTTTATGTCCCA...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGGACCCCTGGCCTCCTaGCGCCCCTCCAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQGPLAS*RPSRVS
Trigger: TGAGACTCTGGAGGGGCGCCAGGAGGCCAGGGGTCC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCAACCCAGGCCTGGCATaGTCCCTGCCCTTGCATCAG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEINPGLA*SLPLHQ
Trigger: CTGATGCAAGGGCAGGGACCATGCCAGGCCTGGGTT...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGCTTGAGAGGACTTCCTaGGCATTCCTATCCATAAAC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGELERTS*AFLSIN
Trigger: GTTTATGGATAGGAATGCTCAGGAAGTCCTCTCAAG...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGCCCAAGTGCCAGGATaGGCTGCATCCGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCAQVPG*AASVSH
Trigger: ATGAGACACGGATGCAGCTCATCCTGGCACTTGGGC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGCCCAAGTGCCAGGATaGGCTGCATCCGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIAQVPG*AASVSH
Trigger: ATGAGACACGGATGCAGCTCATCCTGGCACTTGGGC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGATCCATGTCAGGAATaGCAGGTGAGTAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALDPCQE*QVSNSA
Trigger: GGCTGAGTTACTCACCTGTCATTCCTGACATGGATC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGCCCTCACCCTCCTTTaGTCAGGGTTGCAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEALTLL*SGLQVG
Trigger: GCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTTTCTAGAGCGCAGCTaGTATGTCTTTGACACACCT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVFLERS*YVFDTP
Trigger: AGGTGTGTCAAAGACATATCAGCTGCGCTCTAGAAA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAACTCTGCCCTTGATATaGCTGTCTGGCTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWATLPLI*LSGSFV
Trigger: GACAAAGGAGCCAGACAGTCATATCAAGGGCAGAGT...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCTTTGAACTCTGCCCTTaGTATGACTGTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPFELCP*YDCLAP
Trigger: AGGAGCCAGACAGTCATATCAAGGGCAGAGTTCAAA...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGCGGCTGTGAGGGAATaGGACTTTGCCATCAGTCCT +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHAAVRE*DFAISP
Trigger: AGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCTGGCAGCGCGGCTGTaGGGGAATGAGACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFLAARL*GNETLP
Trigger: TGGCAAAGTCTCATTCCCTCACAGCCGCGCTGCCAG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGCCTGGGAAAGGAGGTaGACCCGTGTCCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCAWERR*TRVLLE
Trigger: CTCCAAAAGGACACGGGTTCACCTCCTTTCCCAGGC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCAATAATAATGAAAAGTaGAGGGTGGGGGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPNNNEK*RVGVLA
Trigger: GGCCAGCACCCCCACCCTTCACTTTTCATTATTATT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGGTCCAGCCCCAGGTATaGCTGGATCCGTGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTVQPQV*LDPCQR
Trigger: TCGCTGACACGGATCCAGTCATACCTGGGGCTGGAC...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCAGAGGACGTGAACGATaGCGTGGGCCCAGGTCGGAA +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFRGRER*RGPRSE
Trigger: TTCCGACCTGGGCCCACGTCATCGTTCACGTCCTCT...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGTTCAGCCTGGCTTCTaGCTGGAAGCTCGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCVQPGF*LEARWV
Trigger: CACCCAGCGAGCTTCCAGTCAGAAGCCAGGCTGAAC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGGACAAAATGTGCACATaGTCAATTTCCCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGEDKMCT*SISPTA
Trigger: TGCAGTGGGGGAAATTGATCATGTGCACATTTTGTC...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGCACTGGGTTATACTCTaGCTAAAAGTACCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEHWVIL*LKVPLK
Trigger: CTTCAGGGGTACTTTTAGGCAGAGTATAACCCAGTG...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314100.10
CDS-3UTR GCA 90 bp GCCTCCTTTATTGGTGCTGCCGGTTGGGGGAGCGTGAGTTGGAGCCTGGGCTGGTTGGAGAGGAATTTCTaGTTCAGGCTGAGACTCTCG +
Preference number: 4 (lower is better)
Translates to: ASFIGAAGWGSVSWSLGWLERNF*FRLRLS
Trigger: CGAGAGTCTCAGCCTGAAGCAGAAATTCCTCTCCAA...CCAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCTCATCTGTCAGCGTTaGCCGCCCAGTGTAGATATA +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALLICQR*PPSVDI
Trigger: TATATCTACACTGGGCGGGCAACGCTGACAGATGAG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTCAAAAGTTACTGACTaGCAGGACTTGCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVSKVTD*QDLQET
Trigger: AGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGATTCTGGCTGCTCTGCTaGTCTGGACACTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGFWLLC*SGHSKW
Trigger: CCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAA...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCTTTCCTCCTTCTGGCTaGTCTGCTGCTCTGGACACT +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSFPPSG*SAALDT
Trigger: AGTGTCCAGAGCAGCAGAGCAGCCAGAAGGAGGAAA...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCGGGCAGGCAATGTTGTaGGCAGTTACCCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFGQAML*AVTQGR
Trigger: CCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGAAGACCCAAGGACTaGAGTGCTGCTCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNRRPKD*SAAHVP
Trigger: TGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCG...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCCAAGGTCAGCAGCATaGTGCTTCAGGCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCPRSAA*CFRPRA
Trigger: GGCCCTTGGCCTGAAGCAGCATGCTGCTGACCTTGG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGATGCGAGGCCGAGCTaGCAAGCTGCTATCTCGTTC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQDARPS*QAAISF
Trigger: GAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGAGGGAATGAGACTTTaGCATCAGTCCTCACCAATG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPEGMRL*HQSSPM
Trigger: CATTGGTGAGGACTGATGGCAAAGTCTCATTCCCTC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTCATGGACACAGCTGCTaGCCAGCACACACCCTACCT +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPHGHSC*PAHTLP
Trigger: AGGTAGGGTGTGTGCTGGGCAGCAGCTGTGTCCATG...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAGGGGTGGTTCATAGCTaGTTCAAGTCCAAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAGVVHS*FKSKVL
Trigger: GAGCACTTTGGACTTGAAGCAGCTATGAACCACCCC...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCCTCCGCCTCGCCTCTaGAACCGGTCTTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFPPPRL*NRSFLQ
Trigger: TTGGAGGAAAGACCGGTTGCAGAGGCGAGGCGGAGG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAGAGCGTCCTCAGTGGTaGAGCCAAGAGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEERPQW*SQEPGR
Trigger: CCTTCCTGGCTCTTGGCTGCACCACTGAGGACGCTC...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGGGGGCGGCTCTTCCATaGACCTGTCCCCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQGAALP*TCPLPL
Trigger: CAGAGGCAGGGGACAGGTGCATGGAAGAGCCGCCCC...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGTGTGTAGCTCCTGGCTaGAGGGCCTCCTCCACCCCC +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQCVAPG*RASSTP
Trigger: GGGGGTGGAGGAGGCCCTGCAGCCAGGAGCTACACA...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCTTACTGGCAGCACCCTaGCCTGCTGACCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCLLAAP*PADPGS
Trigger: GCTTCCAGGGTCAGCAGGGCAGGGTGCTGCCAGTAA...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTCTGCAGTGGTGTCTTaGAGAGGAATTTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVSAVVS*RGISAS
Trigger: TGAAGCAGAAATTCCTCTCCAAGACACCACTGCAGA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCATTGGTGCTGCCGGTTaGGGGAGCGTGAGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCIGAAG*GSVSWS
Trigger: GCTCCAACTCACGCTCCCCCAACCGGCAGCACCAAT...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCGCTGCCTCCTTTATTaGTGCTGCCGGTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFRCLLY*CCRLGE
Trigger: CTCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCAGGAGACATGCACGATaGGTCTCTGTCCCCGCAAGC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIRRHAR*VSVPAS
Trigger: GCTTGCGGGGACAGAGACCCATCGTGCATGTCTCCT...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGCTCAGCCCTGCAGCTaGAGCTACCGGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAAQPCS*SYRGGW
Trigger: CCATCCTCCCCGGTAGCTCCAGCTGCAGGGCTGAGC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAATCGCTTTGGTCCTGGTaGCCCAGGGGAGAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPESLWSW*PRGEVL
Trigger: GAGCACTTCTCCCCTGGGCCACCAGGACCAAAGCGA...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGTGTTTAGGTCGCTTTaGTCCTGGTGGCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNVFRSL*SWWPRG
Trigger: TCCCCTGGGCCACCAGGACCAAAGCGACCTAAACAC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCATGAAAAGTGAAGGGTaGGGGTGCTGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIMKSEG*GCWPPP
Trigger: GGGAGGTGGCCAGCACCCCCACCCTTCACTTTTCAT...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCCTCTTTATCACCAAGTaGCCTCAGTACACAGAACGC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPLFITK*PQYTER
Trigger: GCGTTCTGTGTACTGAGGCCACTTGGTGATAAAGAG...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCAGAAACGCCAAAGGCTaGGAGGCTCTTGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSRNAKG*EALVLW
Trigger: CCAGAGAACAAGAGCCTCCCAGCCTTTGGCGTTTCT...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCAAAGGGGCGAAGAGGGTaGCTGTTACTCATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSKGRRG*LLLILW
Trigger: CCACAAGATGAGTAACAGCCACCCTCTTCGCCCCTT...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481247.6
3UTR CAA 72 bp GGAGGGGCAGCTAAGCCACGGCAGTCCCCGGCAGGTTaGGCCACGCCAGAACTCGGTATATGTTTATCTACA +
Preference number: 4 (lower is better)
Translates to: GGAAKPRQSPAG*ATPELGICLST
Trigger: TGTAGATAAACATATACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACTGCCGTGGCTTAGCTGCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
3UTR CAA 72 bp GTCCTTGCCCTGGTGTGTGGTGTGACACACCTTGACTaGGCCTCCAGGCCCAGCTGGACACACGAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: VLALVCGVTHLD*ASRPSWTHEKS
Trigger: ACTCTTTTCGTGTGTCCAGCTGGGCCTGGAGGCCAAGTCAAGGTGTGTCACACCACACACCAGGGCAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTTGATAATGGATGGCTaGCCTAGCTTAATCTCGATG +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGELIMDG*PSLISM
Trigger: CATCGAGATTAAGCTAGGTCAGCCATCCATTATCAA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGCCATTGACACTTCAATaGAGTATGAGTAAGACCGGC +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPPLTLQ*SMSKTG
Trigger: GCCGGTCTTACTCATACTTCATTGAAGTGTCAATGG...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACCTTTCAAAAGTTACTaGCTGCCAGGACTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAPFKSY*LPGLAG
Trigger: TCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTCCCAACGATACGGATaGAGGAGGCAGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEISQRYG*RRQAAF
Trigger: AAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ATTTCGGCTCCGACTGACTCCTTCAATCACACTGGCACAATCAGCAATTGTTGCTGGGAGTCGAGCTGCTaGCCGGCCAGGCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: ISAPTDSFNHTGTISNCCWESSC*PARLVS
Trigger: GGACACCAGCCTGGCCGGTCAGCAGCTCGACTCCCA...GCAACAATTGCTGATTGTGCCAGTGTGATTGAAGGAGTCAGTCGGAGCCGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCTCTGTCCCCGCAAGCTaGACCGTTCAAAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPSVPAS*TVQNQG
Trigger: TCCTTGGTTTTGAACGGTTCAGCTTGCGGGGACAGA...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGCCACCATCGTCAAATaGGGTCCTTTTGATGAGGAT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALATIVK*GPFDED
Trigger: ATCCTCATCAAAAGGACCTCATTTGACGATGGTGGC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGGGCCTCTGGGCAGGTaGTGCCCATGTTTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPGPLGR*CPCLKR
Trigger: TCTTTTTAAACATGGGCATCACCTGCCCAGAGGCCC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGATCAGTCCTCACCAATaGCATCTACTGTTAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPISPHQ*HLLLVP
Trigger: TGGCACTAACAGTAGATGTCATTGGTGAGGACTGAT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGCGGCTGTGAGGGAATaGGACTTTGCCATCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNAAVRE*DFAISP
Trigger: AGGACTGATGGCAAAGTCTCATTCCCTCACAGCCGC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCGCCTGGGAAAGGAGGTaGACCCGTGTCCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCAWERR*TRVLLE
Trigger: CTCCAAAAGGACACGGGTTCACCTCCTTTCCCAGGC...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAATCACAACGGCTCCTGTaGGACTGCCCTGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKSQRLL*DCPAGC
Trigger: GCACCCAGCAGGGCAGTCTCACAGGAGCCGTTGTGA...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCATTCACTCTGCAAATaGCCAGGGCCTCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHHSLCK*PGPPNP
Trigger: GGGATTTGGAGGCCCTGGTCATTTGCAGAGTGAATG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGGACCAGGGAGCGTGTaGTGGAGAGATTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCGPGSV*WRDFSL
Trigger: CAGTGAGAAATCTCTCCATCACACGCTCCCTGGTCC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCCAATTCGAATATACCTaGAGACACGGGCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVQFEYT*RHGLEN
Trigger: ATTTTCCAGCCCGTGTCTGCAGGTATATTCGAATTG...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGCCCATTCCTAAAGGGTaGCTCCAGGTAGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQPIPKG*LQVAKA
Trigger: GGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGG...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGTCCACAGGTTGATTTaGTTGTGTGCATTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPVHRLI*LCAFVA
Trigger: TGCCACAAATGCACACAAGCAAATCAACCTGTGGAC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCACGGAGTCCCAGTTCTaGGTTCCTGACGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCTESQF*VPDADG
Trigger: CCCATCAGCGTCAGGAACGCAGAACTGGGACTCCGT...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGCTGCTCACGTGCCATaGCGTCCTGGGGAGACTCCC +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFAAHVP*RPGETP
Trigger: GGGAGTCTCCCCAGGACGGCATGGCACGTGAGCAGC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGTCCTTTGATCAGGGTTaGAGGTTGGCGCCGAAGACC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQSFDQG*RLAPKT
Trigger: GGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGA...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTAGGGGACTGGAGGGTTaGAGATGCAGGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFRGLEG*RCRAGQ
Trigger: CTGCCCGGCCCTGCATCTGCAACCCTCCAGTCCCCT...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCGTATTCCTTTTCAGATaGGAGGCCGAGCTGCCAAGC +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPVFLFR*EAELPS
Trigger: GCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATAC...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTTCCATGTTGGCTTGTTaGCCCTGGGGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRASMLAC*PWGWPG
Trigger: CCCAGGCCAGCCCCAGGGGCAACAAGCCAACATGGA...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCCTGTCAGCCTCACCTaGCACCTCTCTCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFPVSLT*HLSPCW
Trigger: CCAACATGGAGAGAGGTGGCAGGTGAGGCTGACAGG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp TCGTGCTCACAAATAATACACATTCCACATAGCAGCACAGCCTTTTGGGCATCTGCTGCAGACCTGCCCTaGCCGGGCCGTGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: SCSQIIHIPHSSTAFWASAADLP*PGRARP
Trigger: AGGTCGGGCACGGCCCGGGCAGGGCAGGTCTGCAGC...AGATGCCCAAAAGGCTGTGCTGCTATGTGGAATGTGTATTATTTGTGAGCACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTAAAACAAATGGAGTATaGCCACCTCTGCCACGGCAT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALKTNGV*PPLPRH
Trigger: ATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTT...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGTGCAGAATCAATGGCTaGAGCTGCCAAAACAAATGG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPCRING*SCQNKW
Trigger: CCATTTGTTTTGGCAGCTGCAGCCATTGATTCTGCA...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGCCTGTCCCCTGCCTCTaGATGAGCCCAGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQPVPCL*MSPAEN
Trigger: ATTTTCTGCTGGGCTCATGCAGAGGCAGGGGACAGG...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAATGGAAGCTCGCTGGGTaGAGCAGACTGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKWKLAG*SRLAWE
Trigger: CTCCCAGGCCAGTCTGCTGCACCCAGCGAGCTTCCA...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCCATCAGGGGCTGTGGTaGAGGAGCAGCCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSHQGLW*RSSHQG
Trigger: GCCCTGGTGGCTGCTCCTGCACCACAGCCCCTGATG...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTGGGCGGCCGGGCTGTaGTCCCTGAGGACCTTACTG +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSWAAGL*SLRTLL
Trigger: CAGTAAGGTCCTCAGGGAGCACAGCCCGGCCGCCCA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGTTGATGAGGCTCCCTTaGAACAATAAACATGAACCC +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGELMRLP*NNKHEP
Trigger: GGGTTCATGTTTATTGTTCCAAGGGAGCCTCATCAA...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314100.10
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGGAAGTGAGTAGAGACTaGCAACATCAAAAGTCATGC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAEEVSRD*QHQKSC
Trigger: GCATGACTTTTGATGTTGCCAGTCTCTACTCACTTC...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCTTCTGTCAGCAACCATaGTCCACTGTTGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSFCQQP*STVAGW
Trigger: CCAACCAGCAACAGTGGACCATGGTTGCTGACAGAA...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCTCAAAGTGGACACAGTaGAACACCTCATTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPSKWTQ*NTSFAV
Trigger: CACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGA...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGCTGACCGGCCAGGCTaGTGTCCCCTGTCCCCGATT +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFADRPG*CPLSPI
Trigger: AATCGGGGACAGGGGACACCAGCCTGGCCGGTCAGC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTTGAGTACTGTGGTGTaGGGGAAGCACGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEILSTVV*GKHGVP
Trigger: TGGGACTCCGTGCTTCCCCCACACCACAGTACTCAA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCAGAAATCAGGGTTGCAGGTTaGCGCCGAAGACCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LPLHQSGLGGTHIFTGPEIRVAG*RRRPKD
Trigger: GTCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGAT...TTCTGGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGCTGTGGGCAGGGGACTaGAGGGTTGCAGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQLWAGD*RVADAG
Trigger: CCCTGCATCTGCAACCCTCCAGTCCCCTGCCCACAG...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGGAGGGGGAGGCGAGCTaGCAGCGCGGCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMEGEAS*QRGCEG
Trigger: TCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTC...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCGTGTTTAGGTCGCTTTaGTCCTGGTGGCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFVFRSL*SWWPRG
Trigger: TCCCCTGGGCCACCAGGACCAAAGCGACCTAAACAC...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTCAGCAGTTTGACAACTaGGGCGACAGCATAATACTG +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALQQFDN*GDSIIL
Trigger: CAGTATTATGCTGTCGCCCCAGTTGTCAAACTGCTG...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACTCTTTATCACCAAGTaGCCTCAGTACACAGAACGC +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWALFITK*PQYTER
Trigger: GCGTTCTGTGTACTGAGGCCACTTGGTGATAAAGAG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGGCAGAAAATCCTAGCTaGAAGGCCGTGGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTAENPS*KAVGLG
Trigger: CCCAAGCCCCACGGCCTTCCAGCTAGGATTTTCTGC...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCACTGGGTGCAGCAGACTaGCCTGGGAGATGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPLGAAD*PGRCQG
Trigger: ACCCTGGCATCTCCCAGGCCAGTCTGCTGCACCCAG...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCTGGGGCTCATGTGGTaGGGAGCAATTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCLGLMW*GAIWQQ
Trigger: CTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAGCACCCTCGCCTTCCTaGGACATAAACCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPAPSPS*DINPWG
Trigger: GCCCCAGGGGTTTATGTCCCAGGAAGGCGAGGGTGC...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATGCATCAGAGTGGCCTaGGAGGTACACACATCTTTA +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWACIRVA*EVHTSL
Trigger: TAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGCATTTTCACACACATaGACTCAGGGGTTTCGAACA +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPAFSHT*TQGFRT
Trigger: TGTTCGAAACCCCTGAGTCCATGTGTGTGAAAATGC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 72 bp TCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTaGCAGCTAGGTCGGCTCCTCCCTGGAAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SVLGRKPVRCLL*QLGRLLPGKGQ
Trigger: CTGCCCCTTTCCAGGGAGGAGCCGACCTAGCTGCAAAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCATTTCTGCTTCAGGCTaGGACTCTCGCATTCCACCA +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPISASG*DSRIPP
Trigger: TGGTGGAATGCGAGAGTCTCAGCCTGAAGCAGAAAT...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGTCATGCAGACATTCTaGATGTTAAGTATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPVMQTF*MLSMVQ
Trigger: CTGCACCATACTTAACATTCAGAATGTCTGCATGAC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAGCCCACCAAGTCTGCATGATTTCAGCATaGTTCTCCTTTGAATTGTGC +
Preference number: 4 (lower is better)
Translates to: DPCSGRRPFPAVARAHQVCMISA*FSFELC
Trigger: GCACAATTCAAAGGAGAATCATGCTGAAATCATGCA...GACTTGGTGGGCTCGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGTGCATGATTTCAGCATaGTTCTCCTTTGAATTGTGC +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAECMISA*FSFELC
Trigger: GCACAATTCAAAGGAGAATCATGCTGAAATCATGCA...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCAGGAGACAGCAGTCCTaGAGGCCTCACAACATTCAG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIRRQQS*RPHNIQ
Trigger: CTGAATGTTGTGAGGCCTTCAGGACTGCTGTCTCCT...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCACACTTCAATGAAGTATaGGTAAGACCGGCTATCTCG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWAHFNEV*VRPAIS
Trigger: CGAGATAGCCGGTCTTACTCATACTTCATTGAAGTG...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp TGCCTCCTTTATTGGTGCTGCCGGTTGGGGGAGCGTGAGTTGGAGCCTGGGCTGCCATTGACACTTCAATaGAGTATGAGTAAGACCGGC +
Preference number: 4 (lower is better)
Translates to: CLLYWCCRLGERELEPGLPLTLQ*SMSKTG
Trigger: GCCGGTCTTACTCATACTTCATTGAAGTGTCAATGG...CAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR TCA 90 bp GGGGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCAATGATCTATCACTCTaGCCCAATCAAGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: GVLATSHFFAWVVVTMAPNDLSL*PNQVHP
Trigger: TGGATGAACTTGATTGGGTCAGAGTGATAGATCATT...GGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CGCCGAAGACCCAAGGACTGCAGTGCTGCTCACGTGCCATGCCGTCCTGGGGAGAATGATCTATCACTCTaGCCCAATCAAGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: RRRPKDCSAAHVPCRPGENDLSL*PNQVHP
Trigger: TGGATGAACTTGATTGGGTCAGAGTGATAGATCATT...CTCCCCAGGACGGCATGGCACGTGAGCAGCACTGCAGTCCTTGGGTCTTCGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTTCTGTCCCCGCAAGCTaGACCGTTCAAAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPSVPAS*TVQNQG
Trigger: TCCTTGGTTTTGAACGGTTCAGCTTGCGGGGACAGA...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCTCTCCCCCTAGTGGAGCGACTGTCCACTGGCTTTCAAAGGCGGCACTCCTCACCAGTGTCCACAGGTTaGTTTGCTTGTGTGCATTTG +
Preference number: 4 (lower is better)
Translates to: PLPLVERLSTGFQRRHSSPVSTG*FACVHL
Trigger: CAAATGCACACAAGCAAATCAACCTGTGGACACTGG...TGAGGAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCCACTAGGGGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCACTCTGCCCTTGATATaGCTGTCTGGCTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPTLPLI*LSGSFV
Trigger: GACAAAGGAGCCAGACAGTCATATCAAGGGCAGAGT...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGGGCCTCTGGGCAGGTaGTGCCCATGTTTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQGPLGR*CPCLKR
Trigger: TCTTTTTAAACATGGGCATCACCTGCCCAGAGGCCC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTATCTGCACAGCAGTTTaGCAACTGGGGCGACAGCAT +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCICTAV*QLGRQH
Trigger: ATGCTGTCGCCCCAGTTGTCAAACTGCTGTGCAGAT...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCTCTTTCCTCCTCCCTaGTGGAAGCCAGAGACCTAC +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFLFPPP*WKPETY
Trigger: GTAGGTCTCTGGCTTCCATCAGGGAGGAGGAAAGAG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTTATCAACGTCTCCAGTaGCCCAGGGCCCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAYQRLQ*PRAQSL
Trigger: CAGGGACTGGGCCCTGGGTCACTGGAGACGTTGATA...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGGTTGCTCTGCAAAATaGGGAAGAAGCCGCATCGTG +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQGCSAK*GRSRIV
Trigger: CACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCAGACAAAATGTGCACATaGTCAATTTCCCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWADKMCT*SISPTA
Trigger: TGCAGTGGGGGAAATTGATCATGTGCACATTTTGTC...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCTGCAATGGCCACAGTaGTGGCCACTTGCCACATGT +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCLQWPQ*WPLATC
Trigger: ACATGTGGCAAGTGGCCATCACTGTGGCCATTGCAG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649492.1
CDS-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAACCATGGTCCACTGTTaGTGGTTGGTAGAAACCTCA +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGTMVHC*WLVETS
Trigger: TGAGGTTTCTACCAACCAGCAACAGTGGACCATGGT...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTACCGTTTCCTGCCGTTaGCCGAGCCCACCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRATVSCR*PSPPSH
Trigger: GTGACTTGGTGGGCTCGGGCAACGGCAGGAAACGGT...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCCCATTCCTAAAGGGTaGCTCCAGGTAGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCPIPKG*LQVAKA
Trigger: GGCCTTTGCTACCTGGAGGCACCCTTTAGGAATGGG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGTTGATTTGCTTGTGTaGATTTGTGGCACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPVDLLV*ICGTSS
Trigger: AGAGGAAGTGCCACAAATGCACACAAGCAAATCAAC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGGAACGTGTCCACCCTaGCCCGGTAGCCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFGTCPP*PGSPLM
Trigger: CATCAGAGGGCTACCGGGGCAGGGTGGACACGTTCC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGAAGCAGCTCAGCCCTaGAGCTGGAGCTACCGGGGA +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFEAAQP*SWSYRG
Trigger: TCCCCGGTAGCTCCAGCTGCAGGGCTGAGCTGCTTC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTGCCGAGCTGCCAAGCTaGTATCTCGTTCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRAAELPS*YLVPGA
Trigger: TGCTCCGGGAACGAGATAGCAGCTTGGCAGCTCGGC...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGTATTCCTTTTCAGATaGGAGGCCGAGCTGCCAAGC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIVFLFR*EAELPS
Trigger: GCTTGGCAGCTCGGCCTCGCATCTGAAAAGGAATAC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCTAGGGCCGAGGCTTTaGAGCGTATTCCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHLGPRL*SVFLFR
Trigger: TCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCGCCCTCCCAGCCACGTaGCAGCCCATCCCATCATCA +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSALPAT*QPIPSS
Trigger: TGATGATGGGATGGGCTGGCACGTGGCTGGGAGGGC...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCAGCACACACCCTACCTaGCCTACACTCTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCSTHPT*PTLSVH
Trigger: GTGGACTGAGAGTGTAGGGCAGGTAGGGTGTGTGCT...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCATCAATGGCTGCAGCTaGCAAAACAAATGGAGTATG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPINGCS*QNKWSM
Trigger: CATACTCCATTTGTTTTGGCAGCTGCAGCCATTGAT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTTCCAGTTGTCCTGCATaGCATTTAAACCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALSSCPA*HLNLAL
Trigger: AAGGGCAAGGTTTAAATGGCATGCAGGACAACTGGA...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGCAAACAAAGACCTGCTaGCTCCGCCCCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQQTKTC*LRPSSL
Trigger: GAGGGAGGAGGGGCGGAGGCAGCAGGTCTTTGTTTG...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACGAGGTTGGAGCATTATaGCAGGAACAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHEVGAL*QEQVFP
Trigger: AGGGAACACCTGTTCCTGGCATAATGCTCCAACCTC...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGTCGCAACGCCTCCTCTaGGCCAGGGCCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMSQRLL*ARARAS
Trigger: AGAGGCCCTGGCCCTGGCGCAGAGGAGGCGTTGCGA...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCATCAATTTCCCCCACTaGAGTAAAGGGGCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPINFPH*SKGAKR
Trigger: CCTCTTCGCCCCTTTACTGCAGTGGGGGAAATTGAT...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481247.6
CDS-3UTR CCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCGAAGTGAGTAGAGACTaGCAACATCAAAAGTCATGC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPEVSRD*QHQKSC
Trigger: GCATGACTTTTGATGTTGCCAGTCTCTACTCACTTC...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTTTGCAACATTCTCCATaGGAACTATCAGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALLQHSP*ELSAPS
Trigger: AGAAGGGGCTGATAGTTCCCATGGAGAATGTTGCAA...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAAGCTGCTATCTCGTTCCCGGAGCACAGGAGGGCTCTGCGTGCTCTGTGGGCATCAAAGTGGACACAGTaGAACACCTCATTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: QAAISFPEHRRALRALWASKWTQ*NTSFAV
Trigger: CACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGA...TGCCCACAGAGCACGCAGAGCCCTCCTGTGCTCCGGGAACGAGATAGCAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGCTGCTCTGCTGCTCTaGACACTCAAAGTGGACACA +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCAALLL*TLKVDT
Trigger: TGTGTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAGGAGACTTTAGTTCTGTCAGCAACCATGGTCCACTGTTGCTGGTTGGTAGAAGCTGACCGGCCAGGCTaGTGTCCCCTGTCCCCGATT +
Preference number: 4 (lower is better)
Translates to: QETLVLSATMVHCCWLVEADRPG*CPLSPI
Trigger: AATCGGGGACAGGGGACACCAGCCTGGCCGGTCAGC...TTCTACCAACCAGCAACAGTGGACCATGGTTGCTGACAGAACTAAAGTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp GTCCCAACGATACGGATGAAGGAGGCAGGCTGCCTTTCAAAAGTTACTGACTGCATTGGTGCTGCCGGTTaGGGGAGCGTGAGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: VPTIRMKEAGCLSKVTDCIGAAG*GSVSWS
Trigger: GCTCCAACTCACGCTCCCCCAACCGGCAGCACCAAT...GCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGGCTTGTGTGCATTTGTaGCACTTCCTCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQACVHL*HFLCGP
Trigger: TGGGCCACAGAGGAAGTGCCACAAATGCACACAAGC...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGAGGCTCTTGTTCTCTGGTGAATCCGGATTCAAGACAGGCTTCGCAAAAGCAGAGTCCCCGGCAGGTTTaGCCACGCCAGAACTCGGTA +
Preference number: 4 (lower is better)
Translates to: GGSCSLVNPDSRQASQKQSPRQV*PRQNSV
Trigger: TACCGAGTTCTGGCGTGGCCAAACCTGCCGGGGACT...CTGCTTTTGCGAAGCCTGTCTTGAATCCGGATTCACCAGAGAACAAGAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGAGGGGGAGGCGAGCTaGCAGCGCGGCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSEGEAS*QRGCEG
Trigger: TCCCTCACAGCCGCGCTGCCAGCTCGCCTCCCCCTC...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGAATGGGGCTGAGGGCTCTGTaGTGCCCAGGAGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: NYFLVSLPSLKAGSMSGMGLRAL*CPGALP
Trigger: TGGGAGGGCTCCTGGGCACCACAGAGCCCTCAGCCC...CATTCCTGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTGCCCTGCTGGGTGCTaGCTGCATGGACACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSCPAGC*LHGHSC
Trigger: GCAGCTGTGTCCATGCAGCCAGCACCCAGCAGGGCA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTGAAGGTGAAGTTGACTaGGCTGGAGCCATCTGCACA +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCEGEVD*AGAICT
Trigger: TGTGCAGATGGCTCCAGCCCAGTCAACTTCACCTTC...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTGCAGCAGACTGGCCTaGGAGATGCCAGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSCSRLA*EMPGCW
Trigger: CCAGCACCCTGGCATCTCCCAGGCCAGTCTGCTGCA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGGGCGCACCAAGGCCTaGAGAGCCTTGGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFGRTKA*RALGRD
Trigger: ATCTCTCCCCAAGGCTCTCCAGGCCTTGGTGCGCCC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTTTCCCAACCCAGGCCTaGCATGGTCCCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFFPTQA*HGPCPC
Trigger: GCAAGGGCAGGGACCATGCCAGGCCTGGGTTGGGAA...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
3UTR CAA 72 bp GGATCCGTGTCAGCGAGAGAGATGGGGGCATTCCAGTaGTCCTGCATGCCATTTAAACCTTGCCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GSVSAREMGAFQ*SCMPFKPCPSL
Trigger: GAGGGAAGGGCAAGGTTTAAATGGCATGCAGGACAACTGGAATGCCCCCATCTCTCTCGCTGACACGGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCATCCCCAATCCTGTATaGTCCATGGTATTTATTTGG +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPIPNPV*SMVFIW
Trigger: CCAAATAAATACCATGGATCATACAGGATTGGGGAT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314100.10
CDS-3UTR TCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCCCATTGACACTTCAATaGAGTATGAGTAAGACCGGC +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSPLTLQ*SMSKTG
Trigger: GCCGGTCTTACTCATACTTCATTGAAGTGTCAATGG...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAATGATCTATCACTCTaGCCCAATCAAGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPNDLSL*PNQVHP
Trigger: TGGATGAACTTGATTGGGTCAGAGTGATAGATCATT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATTACGGTTGTGCCAACTaGACCACAATCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNYGCAN*TTIAPL
Trigger: AAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTA...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTTTCCATTGGTTACTGAGGACCATTGCCCTCATGGGCCCAGGCCACAGGCACCCTTTCAAAAGTTACTaGCTGCCAGGACTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PFHWLLRTIALMGPGHRHPFKSY*LPGLAG
Trigger: TCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGG...GTGCCTGTGGCCTGGGCCCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGGCTTTCTCCTCCGCCTaGGTGTTTGCGTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTAFSSA*VFACHF
Trigger: AAAATGGCACGCAAACACTCAGGCGGAGGAGAAAGC...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GTCCCTGCCCTTGCATCAGAGTGGCCTGGGAGGTACACACATCTTTACAGGCCCTGTATTCCAGCAGAATaGACACTCTATGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VPALASEWPGRYTHLYRPCIPAE*TLYGGP
Trigger: TGGGCCTCCATAGAGTGTTCATTCTGCTGGAATACA...GGGCCTGTAAAGATGTGTGTACCTCCCAGGCCACTCTGATGCAAGGGCAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCACTCAGCCACACGAGTaGCTATTAACTCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEITQPHE*LLTPVS
Trigger: GGACACTGGAGTTAATAGTCACTCGTGTGGCTGAGT...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGATCCATGTCAGGAATaGCAGGTGAGTAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIDPCQE*QVSNSA
Trigger: GGCTGAGTTACTCACCTGTCATTCCTGACATGGATC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTGGACTTCGGAACAGTaGATTAGCAGCGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIWTSEQ*ISSGHS
Trigger: ACTATGCCCGCTGCTAATTCACTGTTCCGAAGTCCA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTTGGACTTCGGAACAGTaGATTAGCAGCGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPWTSEQ*ISSGHS
Trigger: ACTATGCCCGCTGCTAATTCACTGTTCCGAAGTCCA...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGCCCTCACCCTCCTTTaGTCAGGGTTGCAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFALTLL*SGLQVG
Trigger: GCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCTTTAATCACGCAGTTTaGTGCTACCCTACTATTTCC +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPFNHAV*CYPTIS
Trigger: GGAAATAGTAGGGTAGCATCAAACTGCGTGATTAAA...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGCCCCGGTAGCCCTCTaGTGTCTGCCATCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFAPVAL*CLPSCV
Trigger: AACACAGGATGGCAGACATCAGAGGGCTACCGGGGC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAGGCAGAGATCAGAGCTaGGGGGATAGGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKGRDQS*GDRKQL
Trigger: GAGCTGCTTCCTATCCCCTCAGCTCTGATCTCTGCC...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGACTCTGCCCTTGATATaGCTGTCTGGCTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQTLPLI*LSGSFV
Trigger: GACAAAGGAGCCAGACAGTCATATCAAGGGCAGAGT...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCGGGCCTCTGGGCAGGTaGTGCCCATGTTTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFGPLGR*CPCLKR
Trigger: TCTTTTTAAACATGGGCATCACCTGCCCAGAGGCCC...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTTTCCATTGGTTACTaGGGACCATTGCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNLSIGY*GPLPSW
Trigger: CCATGAGGGCAATGGTCCTCAGTAACCAATGGAAAG...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGGGTTGCTCTGCAAAATaGGGAAGAAGCCGCATCGTG +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTGCSAK*GRSRIV
Trigger: CACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACC...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTTTTCCACCACGAATGTaGCGTCGCCATATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCFPPRM*RRHILP
Trigger: GGGAAGAATATGGCGACGTCACATTCGTGGTGGAAA...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTTTCCACCACGAATGTaGCGTCGCCATATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIFPPRM*RRHILP
Trigger: GGGAAGAATATGGCGACGTCACATTCGTGGTGGAAA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCCCAGCGATGCTCCTCTaGGACCAAGCTGCGACACAG +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSPAMLL*DQAATQ
Trigger: CTGTGTCGCAGCTTGGTCTCAGAGGAGCATCGCTGG...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGAATTGCCTTATCTGCTaGTTTTCAGCAAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPNCLIC*FSANQG
Trigger: ACCTTGGTTTGCTGAAAATCAGCAGATAAGGCAATT...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTCATCTGTCAGCGTTaGCCGCCCAGTGTAGATATA +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNLICQR*PPSVDI
Trigger: TATATCTACACTGGGCGGGCAACGCTGACAGATGAG...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGTTCTGGCTGCTCTGCTaGTCTGGACACTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTFWLLC*SGHSKW
Trigger: CCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAA...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGTCCTTCTGGCTGCTCTaGTGCTCTGGACACTCAAAG +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTSFWLL*CSGHSK
Trigger: CTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGA...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCTCCTTCTGGCTGCTCTaGTGCTCTGGACACTCAAAG +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCSFWLL*CSGHSK
Trigger: CTTTGAGTGTCCAGAGCAGCAGAGCAGCCAGAAGGA...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCATCACACCAGGCCCGCTaGCTCCTTTATTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPSHQAR*LLYWCC
Trigger: GCAGCACCAATAAAGGAGGCAGCGGGCCTGGTGTGA...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGTGCTGGCCACCTCCCATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTTGTTGATTTGCTTGTGTaGATTTGTGGCACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GAGHLPFLCLGGGDHGALVDLLV*ICGTSS
Trigger: AGAGGAAGTGCCACAAATGCACACAAGCAAATCAAC...AAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTGGCCAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AAGGCCCCTCAGGGAAGGGCAGTACCCCTCCAGCCTGGGAAAGGAGGTGAACCCAAAGCTTCTTGGAACTaGTATTTTTCAGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: KAPQGRAVPLQPGKGGEPKASWN*YFSVPS
Trigger: ACTGGGGACTGAAAAATAGCAGTTCCAAGAAGCTTT...GGGTTCACCTCCTTTCCCAGGCTGGAGGGGTACTGCCCTTCCCTGAGGGGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCTGCCAAAACAAATGGAGTATGCCCACCTCTGCCACGGCATCGCTGCAGACCTAGGAAGTGCTGTGTGTaGAGGAGCTCTCTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: AAKTNGVCPPLPRHRCRPRKCCV*RSSLAN
Trigger: ATTAGCCAGAGAGCTCCTGCACACACAGCACTTCCT...AGGTCTGCAGCGATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGGAGCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGAGGAAGTGCTGTGTGTaGAGGAGCTCTCTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: GSCRCGSRAEALQRIPFQRKCCV*RSSLAN
Trigger: ATTAGCCAGAGAGCTCCTGCACACACAGCACTTCCT...CTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAAGGTCAGCAGCATGCTaGTTCAGGCCAAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKRSAAC*FRPRAS
Trigger: AGAGGCCCTTGGCCTGAAGCAGCATGCTGCTGACCT...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAGATGCGAGGCCGAGCTaGCAAGCTGCTATCTCGTTC +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKDARPS*QAAISF
Trigger: GAACGAGATAGCAGCTTGGCAGCTCGGCCTCGCATC...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCACCTCCCATTTCTTTaGCTGGGTGGTGGTGACCAT +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTHLPFL*LGGGDH
Trigger: ATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCACCTCCCATTTCTTTaGCTGGGTGGTGGTGACCAT +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCHLPFL*LGGGDH
Trigger: ATGGTCACCACCACCCAGGCAAAGAAATGGGAGGTG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCATTGGGGCCAGCACTGTaGAAAGGATGGGTGAGCACG +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPLGPAL*KGWVST
Trigger: CGTGCTCACCCATCCTTTGCACAGTGCTGGCCCCAA...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GATGGAGAGCTGCAGACCCTGGCTTCTCCTCAGGAACGTGTCCACCCTGCCCCGGAAGAAGCCGCATCGTaGTCACAAATAATACACATT +
Preference number: 4 (lower is better)
Translates to: DGELQTLASPQERVHPAPEEAAS*SQIIHI
Trigger: AATGTGTATTATTTGTGAGCACGATGCGGCTTCTTC...CGGGGCAGGGTGGACACGTTCCTGAGGAGAAGCCAGGGTCTGCAGCTCTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CCTGGGGCTCATGTGGTGGGGAGCAATTTGGCAGCAGACGGACTAATATCAACGCACGGTTTGTACATCTaGCCGCTTAGGTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PGAHVVGSNLAADGLISTHGLYI*PLRLLC
Trigger: GCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTG...CGTTGATATTAGTCCGTCTGCTGCCAAATTGCTCCCCACCACATGAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGTGCAATGTTTTCTTCTaGTATGAGCATGCCTCTATA +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAECNVFF*YEHASI
Trigger: TATAGAGGCATGCTCATACCAGAAGAAAACATTGCA...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTTCTGTCAGCAACCATaGTCCACTGTTGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIFCQQP*STVAGW
Trigger: CCAACCAGCAACAGTGGACCATGGTTGCTGACAGAA...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATTTCTGTCAGCAACCATaGTCCACTGTTGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNFCQQP*STVAGW
Trigger: CCAACCAGCAACAGTGGACCATGGTTGCTGACAGAA...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GTAACCGTATTGACCCAATCATGTACGGTTGTGCCAACTGAACCACAATCGCACTGGGGGAGCGTGAGTTaGAGCCTGGGCTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: VTVLTQSCTVVPTEPQSHWGSVS*SLGWRV
Trigger: TACCCTCCAGCCCAGGCTCCAACTCACGCTCCCCCA...GTGCGATTGTGGTTCAGTTGGCACAACCGTACATGATTGGGTCAATACGGTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTCGCTGCCTCCTTTATTaGTGCTGCCGGTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFRCLLY*CCRLGE
Trigger: CTCCCCCAACCGGCAGCACCAATAAAGGAGGCAGCG...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp CAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCTTAGGTTGCTCTGCAAAAAGCGGCTGACCCGTTaGCTCTTTCTAGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: QGFRTHGLYICPLRLLCKKRLTR*LFLERS
Trigger: GCTGCGCTCTAGAAAGAGCCAACGGGTCAGCCGCTT...TTTGCAGAGCAACCTAAGCGGGCAGATGTACAAACCGTGTGTTCGAAACCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCGGAGGGACAGAGATCTaGAAGGGCATGCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSGGTEI*KGMPRR
Trigger: CCTTCGGGGCATGCCCTTCCAGATCTCTGTCCCTCC...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTGAACCCGTGTCCTTTTaGAGTCCAGGGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFEPVSF*SPGQAP
Trigger: GGGAGCCTGCCCTGGACTCCAAAAGGACACGGGTTC...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GCAGCACTGGAATGGAAATCACTAAGTAGGAGACGGAGCCACATCAAGCCACCAGGAGCGACTGTCCACTaGCTTTCAAAGGCGGCACTC +
Preference number: 4 (lower is better)
Translates to: AALEWKSLSRRRSHIKPPGATVH*LSKAAL
Trigger: GAGTGCCGCCTTTGAAAGCCAGTGGACAGTCGCTCC...TGGTGGCTTGATGTGGCTCCGTCTCCTACTTAGTGATTTCCATTCCAGTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCACCCTCGCCTTCCTaGGACATAAACCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPAPSPS*DINPWG
Trigger: GCCCCAGGGGTTTATGTCCCAGGAAGGCGAGGGTGC...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCCCCAGGTGGGAAGTGTaGGCTGGGGGTAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPPRWEV*AGGKPS
Trigger: GCTGGGTTTACCCCCAGCCCACACTTCCCACCTGGG...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCCAGGCCCCACAGACCTaGAAGCTCTGCCCCAGTATC +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSQAPQT*KLCPSI
Trigger: GATACTGGGGCAGAGCTTCCAGGTCTGTGGGGCCTG...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp ACTCCCAGGCTGATGCTGATGGCGACAGAGGCCGGAGCTCTGGGGACAGCGGAGAATGCTCGAAAATATTaGCACCTGGCTGCTAAAATT +
Preference number: 4 (lower is better)
Translates to: TPRLMLMATEAGALGTAENARKY*HLAAKI
Trigger: AATTTTAGCAGCCAGGTGCCAATATTTTCGAGCATT...CTCCGCTGTCCCCAGAGCTCCGGCCTCTGTCGCCATCAGCATCAGCCTGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
3UTR CAA 72 bp CATTTCTTTGCCTGGGTGGTGGTGACCATGGCGCCCTaGTGTCCTTTCCATTGGTTACTGAGGACCATTGCC +
Preference number: 4 (lower is better)
Translates to: HFFAWVVVTMAP*CPFHWLLRTIA
Trigger: GGCAATGGTCCTCAGTAACCAATGGAAAGGACACAAGGGCGCCATGGTCACCACCACCCAGGCAAAGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTCCACTGGCTTTCAAAGGCGGCACTCCTCAGCTGTCACAGCCGCAGTGACAGCGGAAATCCATATTTATaGGCCAGGCTCAAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: VHWLSKAALLSCHSRSDSGNPYL*ARLKKS
Trigger: GGACTTTTTGAGCCTGGCTCATAAATATGGATTTCC...GCTGTCACTGCGGCTGTGACAGCTGAGGAGTGCCGCCTTTGAAAGCCAGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp TACATCTGCCCGCTTAGGTTGCTCTGCAAAATGAGGAAGAAGCCGCATCGTGCTTCCCAACGATACGGATaGAGGAGGCAGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: YICPLRLLCKMRKKPHRASQRYG*RRQAAF
Trigger: AAAGGCAGCCTGCCTCCTTCATCCGTATCGTTGGGA...AGCACGATGCGGCTTCTTCCTCATTTTGCAGAGCAACCTAAGCGGGCAGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp GCTGCAGATGTGGGTCTAGGGCCGAGGCTTTGCAGCGTATTCCTTTTCAGATGCCCATTTTCTCCCCCTTaGGACCTGCCTGATTTGGAT +
Preference number: 4 (lower is better)
Translates to: AADVGLGPRLCSVFLFRCPFSPP*DLPDLD
Trigger: ATCCAAATCAGGCAGGTCTCAAGGGGGAGAAAATGG...GCATCTGAAAAGGAATACGCTGCAAAGCCTCGGCCCTAGACCCACATCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GTAGCCACTCACTTGTCCCTGTTCCCTGGAGATGAGGTCCTTGCCCTGGTGTGTTGTATTCCAGCAGAATaGACACTCTATGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VATHLSLFPGDEVLALVCCIPAE*TLYGGP
Trigger: TGGGCCTCCATAGAGTGTTCATTCTGCTGGAATACA...ACACACCAGGGCAAGGACCTCATCTCCAGGGAACAGGGACAAGTGAGTGGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATGCCACCATCGTCAAATaGGGTCCTTTTGATGAGGAT +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNATIVK*GPFDED
Trigger: ATCCTCATCAAAAGGACCTCATTTGACGATGGTGGC...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR TCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCGCCCCGGTAGCCCTCTaGTGTCTGCCATCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPAPVAL*CLPSCV
Trigger: AACACAGGATGGCAGACATCAGAGGGCTACCGGGGC...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR TCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCAAGAAGACACGAAGCTaGTGGGGCAGGAGGGCCGTT +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSKKTRS*WGRRAV
Trigger: AACGGCCCTCCTGCCCCATCAGCTTCGTGTCTTCTT...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTTGCCTCCTTTATTGGTaGTGCCGGTTGGGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFCLLYW*CRLGER
Trigger: ACGCTCCCCCAACCGGCAGCACCAATAAAGGAGGCA...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp AGCGGGCATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCTCACACCAGGCCCGCTaGCTCCTTTATTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SGHSNYFLVSLPSLKAGSSHQAR*LLYWCC
Trigger: GCAGCACCAATAAAGGAGGCAGCGGGCCTGGTGTGA...GGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATGCCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCTCCGCCTGAGTGTTTaGGTGCCATTTTTGTATTCC +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNLRLSV*VPFLYS
Trigger: GGAATACAAAAATGGCACGCAAACACTCAGGCGGAG...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCAGTGCCAGGATGAGCTaGATCCGTGTCTCATTTAGG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFSARMS*IRVSFR
Trigger: CCTAAATGAGACACGGATGCAGCTCATCCTGGCACT...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCGAGGGAATGAGACTTTaGCATCAGTCCTCACCAATG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIEGMRL*HQSSPM
Trigger: CATTGGTGAGGACTGATGGCAAAGTCTCATTCCCTC...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTCCTGTCAGCCTCACCTaGCACCTCTCTCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFPVSLT*HLSPCW
Trigger: CCAACATGGAGAGAGGTGGCAGGTGAGGCTGACAGG...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp GGGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATAAAACAAATGGAGTATaGCCACCTCTGCCACGGCAT +
Preference number: 4 (lower is better)
Translates to: GQAMLCAVTQGRQHWNGNKTNGV*PPLPRH
Trigger: ATGCCGTGGCAGAGGTGGGCATACTCCATTTGTTTT...ATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp ACGCCCTCACCCTCCTTTGATCAGGGTTGCAGGTTGGCGCCGAAGACCCAAGGAATCAATGGCTGCAGCTaGCAAAACAAATGGAGTATG +
Preference number: 4 (lower is better)
Translates to: TPSPSFDQGCRLAPKTQGINGCS*QNKWSM
Trigger: CATACTCCATTTGTTTTGGCAGCTGCAGCCATTGAT...TCCTTGGGTCTTCGGCGCCAACCTGCAACCCTGATCAAAGGAGGGTGAGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp CATAGTAACTATTTCCTTGTCAGCCTCCCAAGCTTAAAGGCTGGATCCATGTCAGGGGCGGCTCTTCCATaGACCTGTCCCCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HSNYFLVSLPSLKAGSMSGAALP*TCPLPL
Trigger: CAGAGGCAGGGGACAGGTGCATGGAAGAGCCGCCCC...TGACATGGATCCAGCCTTTAAGCTTGGGAGGCTGACAAGGAAATAGTTACTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GGCAGTCAACAGAGACCCCTGCTCAGGGAGGAGACCGTTTCCTGCCGTTGCCCGGACGCAAATGGTAAATaGTCCCAGACATTTATCATA +
Preference number: 4 (lower is better)
Translates to: GSQQRPLLREETVSCRCPDANGK*SQTFII
Trigger: TATGATAAATGTCTGGGAGCATTTACCATTTGCGTC...CGGGCAACGGCAGGAAACGGTCTCCTCCCTGAGCAGGGGTCTCTGTTGACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR GCA 90 bp GAACAAAGCAGCCCCTTTCTGTCCTTGGGAGAAAACCTGTTCGGTGTCTGCTTTCCTCTGAGACCAAGCTaGGACACAGACGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EQSSPFLSLGENLFGVCFPLRPS*DTDASS
Trigger: GGAAGAGGCGTCTGTGTCGCAGCTTGGTCTCAGAGG...AAAGCAGACACCGAACAGGTTTTCTCCCAAGGACAGAAAGGGGCTGCTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481247.6
ENST00000649492.1
CDS-3UTR GCA 90 bp CCCGGTAGCCCTCTGATGTCTGCCATCCTGTGTTCACACGGAAAGACAGTCTTCCAGCAAACCAAGGTTTaGTCTCTTGGGCTCATGAGG +
Preference number: 4 (lower is better)
Translates to: PGSPLMSAILCSHGKTVFQQTKV*SLGLMR
Trigger: CCTCATGAGCCCAAGAGAGCAAACCTTGGTTTGCTG...GAAGACTGTCTTTCCGTGTGAACACAGGATGGCAGACATCAGAGGGCTACCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649492.1
CDS-3UTR CCA 90 bp GGCAGGCAATGTTGTGCGCAGTTACCCAGGGCAGGCAGCACTGGAATGGAAATCATGGTCCACTGTTGCTaGTTGGTAGAAACCTCAACG +
Preference number: 4 (lower is better)
Translates to: GRQCCAQLPRAGSTGMEIMVHCC*LVETST
Trigger: CGTTGAGGTTTCTACCAACCAGCAACAGTGGACCAT...GATTTCCATTCCAGTGCTGCCTGCCCTGGGTAACTGCGCACAACATTGCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314100.10
ENST00000481247.6
ENST00000649492.1
CDS-3UTR CCA 90 bp GACACAGTGGAACACCTCATTTGCTGTGTTGTGTGTCCCAACGATACGGATGAAAGTTGGAGCCTGGGCTaGAGGGTAGTGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: DTVEHLICCVVCPNDTDESWSLG*RVVSCH
Trigger: GTGGCAGCTCACTACCCTCCAGCCCAGGCTCCAACT...TTCATCCGTATCGTTGGGACACACAACACAGCAAATGAGGTGTTCCACTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328403.10
CDS-3UTR CCA 90 bp ATTTTCACACACATGGACTCAGGGGTTTCGAACACACGGTTTGTACATCTGCCCATTGGTGCTGCCGGTTaGGGGAGCGTGAGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: IFTHMDSGVSNTRFVHLPIGAAG*GSVSWS
Trigger: GCTCCAACTCACGCTCCCCCAACCGGCAGCACCAAT...GGGCAGATGTACAAACCGTGTGTTCGAAACCCCTGAGTCCATGTGTGTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314100.10
ENST00000481247.6
CDS-3UTR CCA 90 bp CACTGGCACAATCAGCAATTGTTGCAACATTCTCCATGGGAACTATCAGCCCCTCGCTGCCTCCTTTATTaGTGCTGCCGGTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: HWHNQQLLQHSPWELSAPRCLLY*C