RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BTBD8 (Homo sapiens)

Ensembl gene IDs: ENSG00000189195

Ensembl transcript IDs: ENST00000342818.4, ENST00000370378.5, ENST00000370382.7, ENST00000635934.1, ENST00000636805.2, ENST00000637221.2, ENST00000642070.1, ENST00000674371.1

Found 601 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTCATATATTGGAGACAGGGTTTTTGAAGGCCGATGGTCATACATaGGGGTTTGTGCCAGTGTGTCACAATCATCTATGTCTCCTGCAG +
Preference number: 1 (lower is better)
Translates to: SHILETGFLKADGHT*GFVPVCHNHLCLLQ
Trigger: CTGCAGGAGACATAGATGATTGTGACACACTGGCACAAACCCGCATGTATGACCATCGGCCTTCAAAAACCCTGTCTCCAATATATGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR TCA 90 bp GCAAACTGGACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTaGACTATTGCAGATCGAGACCAAATTTCTGGCCTTTTCCTAGGG +
Preference number: 1 (lower is better)
Translates to: ANWTLPRGIFSLSLE*TIADRDQISGLFLG
Trigger: CCCTAGGAAAAGGCCAGAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTCCAGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR TCA 90 bp CTTTCTTCAAAGGCTTTGCTTTGGCTTGCACATTTAAGTTTCCTGTaGGTACCTTGGGTCTGGCACCTGAAATTTGCCCTTCCTGATTTC +
Preference number: 1 (lower is better)
Translates to: LSSKALLWLAHLSFL*VPWVWHLKFALPDF
Trigger: GAAATCAGGAAGGGCAAATTTCAGGTGCCAGACCCAAGGTACTCACAGGAAACTTAAATGTGCAAGCCAAAGCAAAGCCTTTGAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR GCA 90 bp TCTCATATATTGGAGACAGGGTTTTTGAAGGCCGATGGTCATACATaGGGGTTTGTGCCAGTGTGTCACAATCATCTATGTCTCCTGAAA +
Preference number: 1 (lower is better)
Translates to: SHILETGFLKADGHT*GFVPVCHNHLCLLK
Trigger: TTTCAGGAGACATAGATGATTGTGACACACTGGCACAAACCCGCATGTATGACCATCGGCCTTCAAAAACCCTGTCTCCAATATATGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674371.1
3UTR GCA 90 bp GACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTaGAGATCGAGACCAAATTTCTGGCCTTTTCCTAGGGATTTCATC +
Preference number: 1 (lower is better)
Translates to: DTASWNIFSFPRVNY*RSRPNFWPFPRDFI
Trigger: GATGAAATCCCTAGGAAAAGGCCAGAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CCA 90 bp ATTACATCCATCTCATATATTGGAGACAGGGTTTTTGAAGGCCGATaGTCATACATGCGGGTTTGTGCCAGTGTGTCACAATCATCTATG +
Preference number: 1 (lower is better)
Translates to: ITSISYIGDRVFEGR*SYMRVCASVSQSSM
Trigger: CATAGATGATTGTGACACACTGGCACAAACCCGCATGTATGACCATCGGCCTTCAAAAACCCTGTCTCCAATATATGAGATGGATGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR TCA 90 bp TGCAACGTTTTCAGCTTCAGATCTTTCATCTTCTGTTTCATCTGCTaGAGAAGATACCTGATCTATTTCCTGAGCAAACTGGACACTGCC +
Preference number: 1 (lower is better)
Translates to: CNVFSFRSFIFCFIC*RRYLIYFLSKLDTA
Trigger: GGCAGTGTCCAGTTTGCTCAGGAAATAGATCAGGTATCTTCTTCAGCAGATGAAACAGAAGATGAAAGATCTGAAGCTGAAAACGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CCA 90 bp TCTTCAGGAGTACTGGTATCACTGCTACTTCTTCCAAGAAAATCATaGCACAGCATAGTGCCACATTTAGAGATACCTCTGTCATTTGAC +
Preference number: 1 (lower is better)
Translates to: SSGVLVSLLLLPRKS*HSIVPHLEIPLSFD
Trigger: GTCAAATGACAGAGGTATCTCTAAATGTGGCACTATGCTGTGCCATGATTTTCTTGGAAGAAGTAGCAGTGATACCAGTACTCCTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CCA 90 bp AGAAGATACCTGATCTATTTCCTGAGCAAACTGGACACTGCCTCGTaGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGA +
Preference number: 1 (lower is better)
Translates to: RRYLIYFLSKLDTAS*NIFSFPRVNYCRSR
Trigger: TCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTCCAGTTTGCTCAGGAAATAGATCAGGTATCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR GCA 90 bp CTTAGGCAAAGCTGTGTGTACTTGCTTGACCATTTTTCTCTTAGGTaGTTGTTTCTCTGTAGTTGTATTGTGGTCCAACTTTGCCACATT +
Preference number: 1 (lower is better)
Translates to: LRQSCVYLLDHFSLR*LFLCSCIVVQLCHI
Trigger: AATGTGGCAAAGTTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAGCAAGTACACACAGCTTTGCCTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR TCA 90 bp GCTTCTGCATCACTTATTTCAGATGCAAGATTAATGAGAGGTTTGTaGGGCTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGC +
Preference number: 1 (lower is better)
Translates to: ASASLISDARLMRGL*GFCSETLSLLLLSR
Trigger: GCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAGCCTCACAAACCTCTCATTAATCTTGCATCTGAAATAAGTGATGCAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CCA 90 bp TTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTaGTCCAACTTTGCCACATTTTCATCAGACTGCCTTGAAGAGACT +
Preference number: 1 (lower is better)
Translates to: LTIFLLGACFSVVVL*SNFATFSSDCLEET
Trigger: AGTCTCTTCAAGGCAGTCTGATGAAAATGTGGCAAAGTTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR TCA 90 bp TACCCTGAGGTTTTGAGCTATCTCGTGCTAAAAGTAGTGTCTGATTaGTTAGATACTGTGCTAAACTTAAGTCTTCAGGAACGGAATTTG +
Preference number: 1 (lower is better)
Translates to: YPEVLSYLVLKVVSD*LDTVLNLSLQERNL
Trigger: CAAATTCCGTTCCTGAAGACTTAAGTTTAGCACAGTATCTAATCAATCAGACACTACTTTTAGCACGAGATAGCTCAAAACCTCAGGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR TCA 90 bp AGAGATAACTCCAACACTCTTTCTTGTTATTTCCCCTCCAAGATTTaGTTTTTATATCACCAGAGTCAGAAACTTGTTTCCTTTGCTGCG +
Preference number: 1 (lower is better)
Translates to: RDNSNTLSCYFPSKI*FLYHQSQKLVSFAA
Trigger: CGCAGCAAAGGAAACAAGTTTCTGACTCTGGTGATATAAAAATCAAATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAGTTATCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR GCA 90 bp ACGGAATTTGTAACATCTAAGTTTGAATCCTGTTCAGAGAGCAGTTaGTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCATCT +
Preference number: 1 (lower is better)
Translates to: TEFVTSKFESCSESS*FSSVQSCFAKCWSS
Trigger: AGATGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGAACAGGATTCAAACTTAGATGTTACAAATTCCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp TCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCAGGGTCCTGCGATGCTaGGGCATGGTGAATCCTTCC +
Preference number: 2 (lower is better)
Translates to: SLMQNTSTQIPVTHKWSFRVLRC*GMVNPS
Trigger: GGAAGGATTCACCATGCCTCAGCATCGCAGGACCCT...GAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTCGCCATGGTCAGTGCTaGTTCCGTCCACTTCACTCT +
Preference number: 2 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSRHGQC*FRPLHS
Trigger: AGAGTGAAGTGGACGGAAGCAGCACTGACCATGGCG...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR GCA 90 bp AGATTCAGGACTCTCTCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCATTCTTCTGTCCAGTTaGTGCTGCTGCTGCTGTTGC +
Preference number: 2 (lower is better)
Translates to: RFRTLSLMQNTSTQIPVTILLSS*CCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAACTGGACAGAAGAAT...GGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGTTGAATCTGTGGATCTaGTGGAGGGTCCTGCGATGC +
Preference number: 2 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQLNLWI*WRVLRC
Trigger: GCATCGCAGGACCCTCCAGCAGATCCACAGATTCAA...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCATGTCCTCTGCTGAGCTaGAGTACATCCATTGCTAGT +
Preference number: 2 (lower is better)
Translates to: FNGFCGSGLQDDWSASASCPLLS*STSIAS
Trigger: ACTAGCAATGGATGTACTGCAGCTCAGCAGAGGACA...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp GGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTTATTACTTTCCACTCCAACTaGATGAGCAATAATCAGGCA +
Preference number: 2 (lower is better)
Translates to: GFCGSGLQDDWSASASLITFHSN*MSNNQA
Trigger: TGCCTGATTATTGCTCATTCAGTTGGAGTGGAAAGT...AATAAGTGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR TCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCATACAACTTGTCTAGGTaGCATGTTTTCCAACCGTGC +
Preference number: 2 (lower is better)
Translates to: FNGFCGSGLQDDWSASASYNLSR*HVFQPC
Trigger: GCACGGTTGGAAAACATGTCACCTAGACAAGTTGTA...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCATGCTGCTGCTGTTGCTaGTCTTTCTACAACTTGTCT +
Preference number: 2 (lower is better)
Translates to: FNGFCGSGLQDDWSASASCCCCC*SFYNLS
Trigger: AGACAAGTTGTAGAAAGATCAGCAACAGCAGCAGCA...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp TCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCGATGCTGAGGCATGGTaGATCCTTCCCTGTAGCTTT +
Preference number: 2 (lower is better)
Translates to: SLMQNTSTQIPVTHKWSFDAEAW*ILPCSF
Trigger: AAAGCTACAGGGAAGGATTCACCATGCCTCAGCATC...GAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp TCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCCTCTTTGTCCTCTGCTaGGCTGCAGTACATCCATTG +
Preference number: 2 (lower is better)
Translates to: SLMQNTSTQIPVTHKWSFLFVLC*AAVHPL
Trigger: CAATGGATGTACTGCAGCTCAGCAGAGGACAAAGAG...GAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp GACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGTCAGGACTCTCTCGCTaGTGCAGAACACCAGTACTC +
Preference number: 2 (lower is better)
Translates to: DTASWNIFSFPRVNYCRSSGLSR*CRTPVL
Trigger: GAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGA...CGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGATTCTTCTGTCCAGTTaGTGCTGCTGCTGCTGTTGC +
Preference number: 2 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQILLSS*CCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAACTGGACAGAAGAAT...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CAA 90 bp AGGCATGGTGAATCCTTCCCTGTAGCTTTCTTCAAAGGCTTTGCTTaGGCTTGCACATTTAAGTTTCCTGTGAGTACCTTGGGTCTGGCA +
Preference number: 2 (lower is better)
Translates to: RHGESFPVAFFKGFA*ACTFKFPVSTLGLA
Trigger: TGCCAGACCCAAGGTACTCACAGGAAACTTAAATGTGCAAGCCAAAGCAAAGCCTTTGAAGAAAGCTACAGGGAAGGATTCACCATGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGCCAACAGATCGGCTGTaGTGCTCATTGCTTGTGACT +
Preference number: 2 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLPTDRL*CSLLVT
Trigger: AGTCACAAGCAATGAGCAGCACAGCCGATCTGTTGG...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR CCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTCCATACTTGAATCTGTaGATCTGCTGGAGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSPYLNL*ICWRVL
Trigger: CAGGACCCTCCAGCAGATCCACAGATTCAAGTATGG...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGTACAACTTGTCTAGGTaGCATGTTTTCCAACCGTGC +
Preference number: 2 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQYNLSR*HVFQPC
Trigger: GCACGGTTGGAAAACATGTCACCTAGACAAGTTGTA...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp AGATTCAGGACTCTCTCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCTTGGAAGATACATCTaGGTCTGCTGTAGCATGTTT +
Preference number: 2 (lower is better)
Translates to: RFRTLSLMQNTSTQIPVTLGRYI*VCCSMF
Trigger: AAACATGCTACAGCAGACTCAGATGTATCTTCCAAG...GGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCAAGACGCCATGGTCAGTaGTGCTTCCGTCCACTTCAC +
Preference number: 2 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSRRHGQ*CFRPLH
Trigger: GTGAAGTGGACGGAAGCAGCACTGACCATGGCGTCT...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR GCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGACAGATCGGCTGTGCTaGTCATTGCTTGTGACTGTA +
Preference number: 2 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLTDRLC*SLLVTV
Trigger: TACAGTCACAAGCAATGAGCAGCACAGCCGATCTGT...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR TCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTGCTTGGATTTTCTGTTaGTCATCTGTGCTCATCAGC +
Preference number: 2 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSAWIFC*SSVLIS
Trigger: GCTGATGAGCACAGATGATCAACAGAAAATCCAAGC...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR TCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCATTCCCCTCCAAGATTTaGTTTTTATATCACCAGAGT +
Preference number: 2 (lower is better)
Translates to: FNGFCGSGLQDDWSASASFPSKI*FLYHQS
Trigger: ACTCTGGTGATATAAAAATCAAATCTTGGAGGGGAA...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCCTTGGAAGATACATCTaGGTCTGCTGTAGCATGTTT +
Preference number: 2 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSLGRYI*VCCSMF
Trigger: AAACATGCTACAGCAGACTCAGATGTATCTTCCAAG...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGTCAGGACTCTCTCGCTaGTGCAGAACACCAGTACTC +
Preference number: 2 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMSGLSR*CRTPVL
Trigger: GAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGA...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CCA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTGAAGCTGAGACGCCATaGTCAGTGCTGCTTCCGTCC +
Preference number: 2 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFEAETP*SVLLPS
Trigger: GGACGGAAGCAGCACTGACCATGGCGTCTCAGCTTC...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR CAA 90 bp TCAGAAACTTGTTTCCTTTGCTGCGAGCTACTGAATATAGGCTTTTaGCCAAGTCTTCGATCATCACCTTTGTCAAATGCAGCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: SETCFLCCELLNIGF*PSLRSSPLSNAAAW
Trigger: CCAAGCAGCTGCATTTGACAAAGGTGATGATCGAAGACTTGGCAAAAAGCCTATATTCAGTAGCTCGCAGCAAAGGAAACAAGTTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR CAA 90 bp CTGTTGATCCATTTTCTTTCGGTTCATCCAGACATTCAGTGGAAATaGAGAATTCCATACTTGAATCTGTGGATCTGCTGGAGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: LLIHFLSVHPDIQWK*RIPYLNLWICWRVL
Trigger: CAGGACCCTCCAGCAGATCCACAGATTCAAGTATGGAATTCTCAATTTCCACTGAATGTCTGGATGAACCGAAAGAAAATGGATCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCTACATCCTTTGCCACTaGCTTTCTTTAGTACACTGT +
Preference number: 2 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSYILCH*LSLVHC
Trigger: ACAGTGTACTAAAGAAAGTCAGTGGCAAAGGATGTA...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGTTAATGAGAGGTTTGTaGGGCTTCTGTTCAGAAACA +
Preference number: 2 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQLMRGL*GFCSET
Trigger: TGTTTCTGAACAGAAGCCTCACAAACCTCTCATTAA...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp AGATTCAGGACTCTCTCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCATAGCAGATTCATCTaGCAACTTACTAGGAATTGT +
Preference number: 2 (lower is better)
Translates to: RFRTLSLMQNTSTQIPVTHSRFI*QLTRNC
Trigger: ACAATTCCTAGTAAGTTGTCAGATGAATCTGCTATG...GGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGGCTCTCTGGAGATTCTaGTGTTTCCATATTTTTAGG +
Preference number: 2 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQALWRF*CFHIFR
Trigger: CCTAAAAATATGGAAACATCAGAATCTCCAGAGAGC...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp CTTTTTCTTGATCGTTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGACATGTTTTCCAACCGTaGCTTATCACCATTTTCTGT +
Preference number: 2 (lower is better)
Translates to: LFLDRLMAFVGQACRMTGHVFQP*LITIFC
Trigger: ACAGAAAATGGTGATAAGGCACGGTTGGAAAACATG...TCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAACGATCAAGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CCA 90 bp GACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGGTTTCTGGAGTTTCATaGCTCTCTGGAGATTCTGAT +
Preference number: 2 (lower is better)
Translates to: DTASWNIFSFPRVNYCRSVSGVS*LSGDSD
Trigger: ATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAAC...CGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CCA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGCTTCCAAGAAAATCATaGCACAGCATAGTGCCACAT +
Preference number: 2 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVLPRKS*HSIVPH
Trigger: ATGTGGCACTATGCTGTGCCATGATTTTCTTGGAAG...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGTTCCCCTCCAAGATTTaGTTTTTATATCACCAGAGT +
Preference number: 2 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQFPSKI*FLYHQS
Trigger: ACTCTGGTGATATAAAAATCAAATCTTGGAGGGGAA...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGCATTTAAGTTTCCTGTaGGTACCTTGGGTCTGGCAC +
Preference number: 2 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMHLSFL*VPWVWH
Trigger: GTGCCAGACCCAAGGTACTCACAGGAAACTTAAATG...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTACATCCTTTGCCACTaGCTTTCTTTAGTACACTGT +
Preference number: 2 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSYILCH*LSLVHC
Trigger: ACAGTGTACTAAAGAAAGTCAGTGGCAAAGGATGTA...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGGGAAGGCTGAGTTTTTaGTATAACCTGTCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMGRLSF*YNLSRR
Trigger: CCTCCTGGACAGGTTATATCAAAAACTCAGCCTTCC...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGCATGTTTTCCAACCGTaGCTTATCACCATTTTCTGT +
Preference number: 2 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLHVFQP*LITIFC
Trigger: ACAGAAAATGGTGATAAGGCACGGTTGGAAAACATG...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCCATTGCCACTATTTTTaGATTAACCTTAGGCAAAGC +
Preference number: 2 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSHCHYF*INLRQS
Trigger: GCTTTGCCTAAGGTTAATGCAAAAATAGTGGCAATG...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGGATATCAAATGGATTTaGCCTGCACTTGTTGAGTCT +
Preference number: 2 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVDIKWI*PALVES
Trigger: AGACTCAACAAGTGCAGGGCAAATCCATTTGATATC...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CAA 90 bp TGCTTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATaGTGGTCCAACTTTGCCACATTTTCATCAGACTGCCTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: CLTIFLLGACFSVVV*WSNFATFSSDCLEE
Trigger: CTCTTCAAGGCAGTCTGATGAAAATGTGGCAAAGTTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CAA 90 bp ATTCCACTTTCTGCTCAAATGCTTCTATTACATCCATCTCATATATaGGAGACAGGGTTTTTGAAGGCCGATGGTCATACATGCGGGTTT +
Preference number: 2 (lower is better)
Translates to: IPLSAQMLLLHPSHI*ETGFLKADGHTCGF
Trigger: AAACCCGCATGTATGACCATCGGCCTTCAAAAACCCTGTCTCCAATATATGAGATGGATGTAATAGAAGCATTTGAGCAGAAAGTGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTCCATTGGTAACTCTTaGAACAGGTCGAGATTTTAT +
Preference number: 2 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSSIGNS*NRSRFY
Trigger: ATAAAATCTCGACCTGTTTCAAGAGTTACCAATGGA...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGTCTCCTTGGGATCCTTaGGTTTTAGTAAGATTAGAT +
Preference number: 2 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLSPWDP*VLVRLD
Trigger: ATCTAATCTTACTAAAACTCAAGGATCCCAAGGAGA...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGTTCTGTTTCATCTGCTaGAGAAGATACCTGATCTAT +
Preference number: 2 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVFCFIC*RRYLIY
Trigger: ATAGATCAGGTATCTTCTTCAGCAGATGAAACAGAA...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp TCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCCAAAACCTTGCAAAATaGTTTACAATCCACTTCATG +
Preference number: 2 (lower is better)
Translates to: SLMQNTSTQIPVTHKWSFQNLAK*FTIHFM
Trigger: CATGAAGTGGATTGTAAAGCATTTTGCAAGGTTTTG...GAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR CCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGTCAAAGGCTTTGCTTTaGCTTGCACATTTAAGTTTC +
Preference number: 2 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLSKALL*LAHLSF
Trigger: GAAACTTAAATGTGCAAGCCAAAGCAAAGCCTTTGA...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CCA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCAATTGCCTGTGGTACTaGCTCACTACATCCTTTGCC +
Preference number: 2 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFNCLWY*LTTSFA
Trigger: GGCAAAGGATGTAGTGAGCCAGTACCACAGGCAATT...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CCA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCACTTCAAAATTGCCTGTaGTACTGGCTCACTACATCC +
Preference number: 2 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSLQNCL*YWLTTS
Trigger: GGATGTAGTGAGCCAGTACCACAGGCAATTTTGAAG...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CAA 90 bp CCCGAAAAACACTTGGAAGATACATCTGAGTCTGCTGTAGCATGTTaGTCTTCATCCATAGCAGATTCATCTGACAACTTACTAGGAATT +
Preference number: 2 (lower is better)
Translates to: PEKHLEDTSESAVAC*SSSIADSSDNLLGI
Trigger: AATTCCTAGTAAGTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGATGTATCTTCCAAGTGTTTTTCGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGTCCACTCCAACTGAATaGGCAATAATCAGGCATTCT +
Preference number: 2 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMSTPTE*AIIRHS
Trigger: AGAATGCCTGATTATTGCTCATTCAGTTGGAGTGGA...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR TCA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCAATTTCTATTGGTACTTaGCGAATGTCCAGATGCTCC +
Preference number: 2 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSISIGT*RMSRCS
Trigger: GGAGCATCTGGACATTCGTCAAGTACCAATAGAAAT...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR TCA 90 bp AACTTTAAAGACCTCCTTATTCTTCCGATTTTGCTGAACAGGAAACTACTGATCTGCTGCTGCTGTTGCTaGTCTTTCTACAACTTGTCT +
Preference number: 2 (lower is better)
Translates to: NFKDLLILPILLNRKLLICCCCC*SFYNLS
Trigger: AGACAAGTTGTAGAAAGATCAGCAACAGCAGCAGCA...GATCAGTAGTTTCCTGTTCAGCAAAATCGGAAGAATAAGGAGGTCTTTAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674371.1
3UTR-3UTR TCA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGCTTTGGGAGGAAGGCTaGGTTTTTGATATAACCTGT +
Preference number: 2 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMLWEEG*VFDITC
Trigger: ACAGGTTATATCAAAAACTCAGCCTTCCTCCCAAAG...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACACATTTTCATCAGACTaGCTTGAAGAGACTGAAGAT +
Preference number: 2 (lower is better)
Translates to: SESAVACLSSSIADSSDNTFSSD*LEETED
Trigger: ATCTTCAGTCTCTTCAAGGCAGTCTGATGAAAATGT...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CCA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCCATAGTCTTCAGATCTaGGCTTTATGTCATCGGAGG +
Preference number: 2 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFHSLQI*ALCHRR
Trigger: CCTCCGATGACATAAAGCCCAGATCTGAAGACTATG...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CCA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGTTTCTCGTGAGAATCTaGAATAGCAGGTCCTTCCAT +
Preference number: 2 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMFLVRI*NSRSFH
Trigger: ATGGAAGGACCTGCTATTCCAGATTCTCACGAGAAA...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCCTCAGGAGGTATATTTaGAAAGCTTCTCTCAGACCA +
Preference number: 2 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFLRRYI*KASLRP
Trigger: TGGTCTGAGAGAAGCTTTGCAAATATACCTCCTGAG...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR GCA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACAAAGCTGTGTGTACTTaGTTGACCATTTTTCTCTTA +
Preference number: 2 (lower is better)
Translates to: SESAVACLSSSIADSSDNKAVCT*LTIFLL
Trigger: TAAGAGAAAAATGGTCAAGCAAGTACACACAGCTTT...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CAA 90 bp AGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGGTCTTTCTaGAGATTTTACATCACTATCCAAGAATTTGCTGCGTTGCTGAAT +
Preference number: 2 (lower is better)
Translates to: RIGFSLMKIQVTWSF*RFYITIQEFAALLN
Trigger: ATTCAGCAACGCAGCAAATTCTTGGATAGTGATGTAAAATCTCAAGAAAGACCATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAATACTATGTTACCCTATaGAGAGCAAAAAGTAAAGGG +
Preference number: 2 (lower is better)
Translates to: PYLISNGFALHLLSLNHKYYVTL*RAKSKG
Trigger: CCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTA...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp CTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATATCACCTTTGTCAAATaGAGCTGCTTGGATTTTCTG +
Preference number: 2 (lower is better)
Translates to: LLFRNTVLVVIITHIMKHITFVK*SCLDFL
Trigger: CAGAAAATCCAAGCAGCTGCATTTGACAAAGGTGAT...ATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR GCA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTACTTGTTTCCTTTGCTaGGAGCTACTGAATATAGGC +
Preference number: 2 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFTCFLC*ELLNIG
Trigger: GCCTATATTCAGTAGCTCGCAGCAAAGGAAACAAGT...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR CCA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCATTTAGTAAGATTAGATaGGGTACTCTTTGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSFSKIR*GTLCPL
Trigger: CAGAGGACAAAGAGTACCCCATCTAATCTTACTAAA...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CCA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCATTCTTCAGGAGTACTaGTATCACTGCTACTTCTTC +
Preference number: 2 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFILQEY*YHCYFF
Trigger: GAAGAAGTAGCAGTGATACCAGTACTCCTGAAGAAT...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CAA 90 bp AGATTTTGTAGAGCTGTTCTTTGGTATGTCAGAATTGGGTTCTCTTaGATGAAGATCCAAGTGACATGGTCTTTCTTGAGATTTTACATC +
Preference number: 2 (lower is better)
Translates to: RFCRAVLWYVRIGFS*MKIQVTWSFLRFYI
Trigger: GATGTAAAATCTCAAGAAAGACCATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACAGCTCTACAAAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR GCA 90 bp AACTTTAAAGACCTCCTTATTCTTCCGATTTTGCTGAACAGGAAACTACTGATCTACTATGTTACCCTATaGAGAGCAAAAAGTAAAGGG +
Preference number: 2 (lower is better)
Translates to: NFKDLLILPILLNRKLLIYYVTL*RAKSKG
Trigger: CCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTA...GATCAGTAGTTTCCTGTTCAGCAAAATCGGAAGAATAAGGAGGTCTTTAAAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674371.1
3UTR-3UTR GCA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAATTACAATCCACTTCATaGAGTCAGCAAAAAGACTTT +
Preference number: 2 (lower is better)
Translates to: PYLISNGFALHLLSLNHKLQSTS*SQQKDF
Trigger: AAAGTCTTTTTGCTGACTGCATGAAGTGGATTGTAA...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR GCA 90 bp CTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATTTTGTCAAATGCAGCTaGTTGGATTTTCTGTTGATC +
Preference number: 2 (lower is better)
Translates to: LLFRNTVLVVIITHIMKHFVKCS*LDFLLI
Trigger: GATCAACAGAAAATCCAAGCAGCTGCATTTGACAAA...ATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR GCA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGAAAGCTGTGTGTACTTaGTTGACCATTTTTCTCTTA +
Preference number: 2 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMKAVCT*LTIFLL
Trigger: TAAGAGAAAAATGGTCAAGCAAGTACACACAGCTTT...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CCA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCTCAAAGGCTTTGCTTTaGCTTGCACATTTAAGTTTC +
Preference number: 2 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFSKALL*LAHLSF
Trigger: GAAACTTAAATGTGCAAGCCAAAGCAAAGCCTTTGA...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTTCGATCATCACCTTaGTCAAATGCAGCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: FNGFCGSGLQDDWSASASLRSSP*SNAAAW
Trigger: CCAAGCAGCTGCATTTGACAAAGGTGATGATCGAAG...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR CAA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCAACCAGAGTCAGAAACTaGTTTCCTTTGCTGCGAGCT +
Preference number: 3 (lower is better)
Translates to: FNGFCGSGLQDDWSASASTRVRN*FPLLRA
Trigger: AGCTCGCAGCAAAGGAAACAAGTTTCTGACTCTGGT...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR CAA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCAGCTGTGTGTACTTGCTaGACCATTTTTCTCTTAGGT +
Preference number: 3 (lower is better)
Translates to: FNGFCGSGLQDDWSASASAVCTC*TIFLLG
Trigger: ACCTAAGAGAAAAATGGTCAAGCAAGTACACACAGC...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR GCA 72 bp TTGGAGACAGGGTTTTTGAAGGCCGATGGTCATACATaGGGGTTTGTGCCAGTGTGTCACAATCATCTATGT +
Preference number: 3 (lower is better)
Translates to: LETGFLKADGHT*GFVPVCHNHLC
Trigger: ACATAGATGATTGTGACACACTGGCACAAACCCGCATGTATGACCATCGGCCTTCAAAAACCCTGTCTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp GGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTTATTTTTCCCCTCCAAGATTaGATTTTTATATCACCAGAG +
Preference number: 3 (lower is better)
Translates to: GFCGSGLQDDWSASASLIFPLQD*IFISPE
Trigger: CTCTGGTGATATAAAAATCAAATCTTGGAGGGGAAA...AATAAGTGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp CTTTTTCTTGATCGTTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGCTGCAGTACATCCATaGCTAGTTCCTCTTTTCTTC +
Preference number: 3 (lower is better)
Translates to: LFLDRLMAFVGQACRMTGAAVHP*LVPLFF
Trigger: GAAGAAAAGAGGAACTAGCAATGGATGTACTGCAGC...TCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAACGATCAAGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CCA 72 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTaGAGTGCTTCTGCATCACTTATTTCAGATGCAAGA +
Preference number: 3 (lower is better)
Translates to: FNGFCGSGLQDD*SASASLISDAR
Trigger: TCTTGCATCTGAAATAAGTGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CCA 72 bp CAGAACACCAGTACTCAAATTCCAGTGACCCACAAATaGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTC +
Preference number: 3 (lower is better)
Translates to: QNTSTQIPVTHK*SFWSFMALWRF
Trigger: GAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CCA 72 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTaGACCTTCCTGAGGCAGAACTTGACTCCGAAAGGA +
Preference number: 3 (lower is better)
Translates to: SFFSSCRMALFH*TFLRQNLTPKG
Trigger: TCCTTTCGGAGTCAAGTTCTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CCA 72 bp ATCTCATATATTGGAGACAGGGTTTTTGAAGGCCGATaGTCATACATGCGGGTTTGTGCCAGTGTGTCACAA +
Preference number: 3 (lower is better)
Translates to: ISYIGDRVFEGR*SYMRVCASVSQ
Trigger: TTGTGACACACTGGCACAAACCCGCATGTATGACCATCGGCCTTCAAAAACCCTGTCTCCAATATATGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp TCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGCTTGGATTTTCTGTaGATCATCTGTGCTCATCAG +
Preference number: 3 (lower is better)
Translates to: SLMQNTSTQIPVTHKWSFCLDFL*IICAHQ
Trigger: CTGATGAGCACAGATGATCAACAGAAAATCCAAGCA...GAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR CAA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACCTGCTGCTGCTGCTGTaGCTGATCTTTCTACAACTT +
Preference number: 3 (lower is better)
Translates to: SESAVACLSSSIADSSDNLLLLL*LIFLQL
Trigger: AAGTTGTAGAAAGATCAGCAACAGCAGCAGCAGCAG...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGGCTCACTACATCCTTaGCCACTGACTTTCTTTAGT +
Preference number: 3 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLGSLHP*PLTFFS
Trigger: ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCC...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCAAGATTTTACTGAGTTaGGTGACTCTCCTTGGGATC +
Preference number: 3 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSKILLS*VTLLGI
Trigger: GATCCCAAGGAGAGTCACCAAACTCAGTAAAATCTT...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCATTTCATCAGACTGCCTaGAAGAGACTGAAGATTTTA +
Preference number: 3 (lower is better)
Translates to: FNGFCGSGLQDDWSASASFHQTA*KRLKIL
Trigger: TAAAATCTTCAGTCTCTTCAAGGCAGTCTGATGAAA...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGGGATTTGCCCTGCACTaGTTGAGTCTAAATCACAAA +
Preference number: 3 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQGFALH*LSLNHK
Trigger: TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCC...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR TCA 72 bp TATTACATCCATCTCATATATTGGAGACAGGGTTTTTaGAGGCCGATGGTCATACATGCGGGTTTGTGCCAG +
Preference number: 3 (lower is better)
Translates to: YYIHLIYWRQGF*RPMVIHAGLCQ
Trigger: CTGGCACAAACCCGCATGTATGACCATCGGCCTTCAAAAACCCTGTCTCCAATATATGAGATGGATGTAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCTCTCAGACCAAAACCTaGCAAAATGCTTTACAATCC +
Preference number: 3 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSSQTKT*QNALQS
Trigger: GGATTGTAAAGCATTTTGCAAGGTTTTGGTCTGAGA...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR CAA 90 bp ACTTGTTTCCTTTGCTGCGAGCTACTGAATATAGGCTTTTTGCCAAGTCTTCGATCTCAGGAGGTATATTaGCAAAGCTTCTCTCAGACC +
Preference number: 3 (lower is better)
Translates to: TCFLCCELLNIGFLPSLRSQEVY*QSFSQT
Trigger: GGTCTGAGAGAAGCTTTGCAAATATACCTCCTGAGA...TCGAAGACTTGGCAAAAAGCCTATATTCAGTAGCTCGCAGCAAAGGAAACAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR CAA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCCAATTGCTTTTAAAATaGTGTCCAACAGATCGGCTG +
Preference number: 3 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSQLLLK*CPTDRL
Trigger: CAGCCGATCTGTTGGACACAATTTTAAAAGCAATTG...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR CAA 90 bp CTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATCGCAGAGCCTGGATCTaGCACGTAAAACCCATTTCC +
Preference number: 3 (lower is better)
Translates to: LLFRNTVLVVIITHIMKHRRAWI*HVKPIS
Trigger: GGAAATGGGTTTTACGTGCAAGATCCAGGCTCTGCG...ATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR CAA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGCTCCAACACTCTTTCTaGTTATTTCCCCTCCAAGAT +
Preference number: 3 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVLQHSF*LFPLQD
Trigger: ATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAG...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGTATTTCTATTGGTACTaGACGAATGTCCAGATGCTC +
Preference number: 3 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQYFYWY*TNVQML
Trigger: GAGCATCTGGACATTCGTCAAGTACCAATAGAAATA...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp CTTTTTCTTGATCGTTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGACTTTCTTCAAAGGCTTaGCTTTGGCTTGCACATTTA +
Preference number: 3 (lower is better)
Translates to: LFLDRLMAFVGQACRMTGLSSKA*LWLAHL
Trigger: TAAATGTGCAAGCCAAAGCAAAGCCTTTGAAGAAAG...TCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAACGATCAAGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACCTCTTTTCTTCAAAATaGCCTGTGGTACTGGCTCAC +
Preference number: 3 (lower is better)
Translates to: SESAVACLSSSIADSSDNLFSSK*PVVLAH
Trigger: GTGAGCCAGTACCACAGGCAATTTTGAAGAAAAGAG...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCCTCTCCTTGGGATCCTaGAGTTTTAGTAAGATTAGA +
Preference number: 3 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSLSLGS*SFSKIR
Trigger: TCTAATCTTACTAAAACTCAAGGATCCCAAGGAGAG...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp GACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGGCTGTGTGTACTTGCTaGACCATTTTTCTCTTAGGT +
Preference number: 3 (lower is better)
Translates to: DTASWNIFSFPRVNYCRSAVCTC*TIFLLG
Trigger: ACCTAAGAGAAAAATGGTCAAGCAAGTACACACAGC...CGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR TCA 72 bp TTAGTAAGATTAGATGGGGTACTCTTTGTCCTCTGCTaGGCTGCAGTACATCCATTGCTAGTTCCTCTTTTC +
Preference number: 3 (lower is better)
Translates to: LVRLDGVLFVLC*AAVHPLLVPLF
Trigger: GAAAAGAGGAACTAGCAATGGATGTACTGCAGCTCAGCAGAGGACAAAGAGTACCCCATCTAATCTTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR TCA 72 bp ACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTaGACTATTGCAGATCGAGACCAAATTTCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: TLPRGIFSLSLE*TIADRDQISGL
Trigger: AAGGCCAGAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CCA 72 bp GTACTGGTATCACTGCTACTTCTTCCAAGAAAATCATaGCACAGCATAGTGCCACATTTAGAGATACCTCTG +
Preference number: 3 (lower is better)
Translates to: VLVSLLLLPRKS*HSIVPHLEIPL
Trigger: CAGAGGTATCTCTAAATGTGGCACTATGCTGTGCCATGATTTTCTTGGAAGAAGTAGCAGTGATACCAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp AAAATTGCCTGTGGTACTGGCTCACTACATCCTTTGCCACTGACTTTCTTTAGTTGCAATACATTTTTCTaGAAGCTGAGACGCCATGGT +
Preference number: 3 (lower is better)
Translates to: KIACGTGSLHPLPLTFFSCNTFF*KLRRHG
Trigger: ACCATGGCGTCTCAGCTTCAAGAAAAATGTATTGCA...ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCCAGTACCACAGGCAATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR CAA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGCTGAATATAGGCTTTTaGCCAAGTCTTCGATCATCA +
Preference number: 3 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLLNIGF*PSLRSS
Trigger: TGATGATCGAAGACTTGGCAAAAAGCCTATATTCAG...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR CAA 90 bp AAAATTGCCTGTGGTACTGGCTCACTACATCCTTTGCCACTGACTTTCTTTAGTCTCCAACACTCTTTCTaGTTATTTCCCCTCCAAGAT +
Preference number: 3 (lower is better)
Translates to: KIACGTGSLHPLPLTFFSLQHSF*LFPLQD
Trigger: ATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAG...ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCCAGTACCACAGGCAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTATTTCTATTGGTACTaGACGAATGTCCAGATGCTC +
Preference number: 3 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSYFYWY*TNVQML
Trigger: GAGCATCTGGACATTCGTCAAGTACCAATAGAAATA...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp TCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTTCAAAGGCTTTGCTTaGGCTTGCACATTTAAGTTT +
Preference number: 3 (lower is better)
Translates to: SLMQNTSTQIPVTHKWSFFKGFA*ACTFKF
Trigger: AAACTTAAATGTGCAAGCCAAAGCAAAGCCTTTGAA...GAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGCTTTCTTCAAAGGCTTaGCTTTGGCTTGCACATTTA +
Preference number: 3 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVLSSKA*LWLAHL
Trigger: TAAATGTGCAAGCCAAAGCAAAGCCTTTGAAGAAAG...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR TCA 72 bp TGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTaGCAACTTACTAGGAATTGTCAGTCCTTCCACAGG +
Preference number: 3 (lower is better)
Translates to: CSMFVFIHSRFI*QLTRNCQSFHR
Trigger: CCTGTGGAAGGACTGACAATTCCTAGTAAGTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR GCA 72 bp TCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTaGAGATCGAGACCAAATTTCTGGCCTTTTCCTAGG +
Preference number: 3 (lower is better)
Translates to: SWNIFSFPRVNY*RSRPNFWPFPR
Trigger: CCTAGGAAAAGGCCAGAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCCTGCTGCTGCTGCTGTaGCTGATCTTTCTACAACTT +
Preference number: 3 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFLLLLL*LIFLQL
Trigger: AAGTTGTAGAAAGATCAGCAACAGCAGCAGCAGCAG...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCAAAGGCTTTGCTTaGGCTTGCACATTTAAGTTT +
Preference number: 3 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSFKGFA*ACTFKF
Trigger: AAACTTAAATGTGCAAGCCAAAGCAAAGCCTTTGAA...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp GACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGTTTCATCAGACTGCCTaGAAGAGACTGAAGATTTTA +
Preference number: 3 (lower is better)
Translates to: DTASWNIFSFPRVNYCRSFHQTA*KRLKIL
Trigger: TAAAATCTTCAGTCTCTTCAAGGCAGTCTGATGAAA...CGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGGTGTCCAATCTTGTTTaGCAAAATGTTGGTCATCTT +
Preference number: 3 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVVSNLV*QNVGHL
Trigger: AAGATGACCAACATTTTGCAAAACAAGATTGGACAC...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCCTCTTTTCTTCAAAATaGCCTGTGGTACTGGCTCAC +
Preference number: 3 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFLFSSK*PVVLAH
Trigger: GTGAGCCAGTACCACAGGCAATTTTGAAGAAAAGAG...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAAAAGATTTTACTGAGTTaGGTGACTCTCCTTGGGATC +
Preference number: 3 (lower is better)
Translates to: PYLISNGFALHLLSLNHKKILLS*VTLLGI
Trigger: GATCCCAAGGAGAGTCACCAAACTCAGTAAAATCTT...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CCA 72 bp TTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTaGTCCAACTTTGCCACATTTTCATCAGACTGCCTT +
Preference number: 3 (lower is better)
Translates to: FLLGACFSVVVL*SNFATFSSDCL
Trigger: AAGGCAGTCTGATGAAAATGTGGCAAAGTTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGTATTGTGGTCCAACTTaGCCACATTTTCATCAGACT +
Preference number: 3 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMYCGPT*PHFHQT
Trigger: AGTCTGATGAAAATGTGGCAAAGTTGGACCACAATA...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp CTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATTTCTCTGTAGTTGTATaGTGGTCCAACTTTGCCACA +
Preference number: 3 (lower is better)
Translates to: LLFRNTVLVVIITHIMKHFSVVV*WSNFAT
Trigger: TGTGGCAAAGTTGGACCACAATACAACTACAGAGAA...ATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp AACTTTAAAGACCTCCTTATTCTTCCGATTTTGCTGAACAGGAAACTACTGATCTCTGCTGTAGCATGTTaGTCTTCATCCATAGCAGAT +
Preference number: 3 (lower is better)
Translates to: NFKDLLILPILLNRKLLISAVAC*SSSIAD
Trigger: ATCTGCTATGGATGAAGACAAACATGCTACAGCAGA...GATCAGTAGTTTCCTGTTCAGCAAAATCGGAAGAATAAGGAGGTCTTTAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674371.1
3UTR-3UTR CAA 90 bp GTACTTGACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTAGTCAAATGCAGCTGCTaGGATTTTCTGTTGATCATC +
Preference number: 3 (lower is better)
Translates to: VLDECPDAPNPSDFIFLLVKCSC*DFLLII
Trigger: GATGATCAACAGAAAATCCAAGCAGCTGCATTTGAC...TAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTCAAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR-3UTR CAA 90 bp CTTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTGGTCCAATTTCCCCTCCAAGATTaGATTTTTATATCACCAGAG +
Preference number: 3 (lower is better)
Translates to: LDHFSLRCLFLCSCIVVQFPLQD*IFISPE
Trigger: CTCTGGTGATATAAAAATCAAATCTTGGAGGGGAAA...TTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCCTCTCCTTGGGATCCTaGAGTTTTAGTAAGATTAGA +
Preference number: 3 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFLSLGS*SFSKIR
Trigger: TCTAATCTTACTAAAACTCAAGGATCCCAAGGAGAG...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR-3UTR CAA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCCAAAGCTGTGTGTACTaGCTTGACCATTTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFQSCVY*LDHFSL
Trigger: AAGAGAAAAATGGTCAAGCAAGTACACACAGCTTTG...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR TCA 72 bp TCACTTATTTCAGATGCAAGATTAATGAGAGGTTTGTaGGGCTTCTGTTCAGAAACACTGTCCTTGTTGTTA +
Preference number: 3 (lower is better)
Translates to: SLISDARLMRGL*GFCSETLSLLL
Trigger: TAACAACAAGGACAGTGTTTCTGAACAGAAGCCTCACAAACCTCTCATTAATCTTGCATCTGAAATAAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR TCA 72 bp GTTTTGAGCTATCTCGTGCTAAAAGTAGTGTCTGATTaGTTAGATACTGTGCTAAACTTAAGTCTTCAGGAA +
Preference number: 3 (lower is better)
Translates to: VLSYLVLKVVSD*LDTVLNLSLQE
Trigger: TTCCTGAAGACTTAAGTTTAGCACAGTATCTAATCAATCAGACACTACTTTTAGCACGAGATAGCTCAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR GCA 72 bp GTAACATCTAAGTTTGAATCCTGTTCAGAGAGCAGTTaGTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGT +
Preference number: 3 (lower is better)
Translates to: VTSKFESCSESS*FSSVQSCFAKC
Trigger: ACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGAACAGGATTCAAACTTAGATGTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CCA 72 bp ATTCTAAAATATTATCTTCACTTTCTCGTGAGAATCTaGAATAGCAGGTCCTTCCATGATGTTCATGAGAAA +
Preference number: 3 (lower is better)
Translates to: ILKYYLHFLVRI*NSRSFHDVHEK
Trigger: TTTCTCATGAACATCATGGAAGGACCTGCTATTCCAGATTCTCACGAGAAAGTGAAGATAATATTTTAGAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCAGTACTTGGCCTCACTTaGCCCGCCCAGGAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: FNGFCGSGLQDDWSASASVLGLT*PAQEEE
Trigger: TTCTTCCTCCTGGGCGGGGCAAGTGAGGCCAAGTAC...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CCA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGAGAGGTACGACGCCCTaGAGGCCCAGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQRGTTP*RPSTWP
Trigger: AGGCCAAGTACTGGGCCTCCAGGGCGTCGTACCTCT...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTACCCCAGAAGTACCATaGGGGCCGCACTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSTPEVP*GPHCLP
Trigger: GGGAAGGCAGTGCGGCCCCCATGGTACTTCTGGGGT...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR GCA 90 bp CTTTTTCTTGATCGTTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAAAATCCTGGCTGAGCTaGTCCGACACCGTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LFLDRLMAFVGQACRMTGKSWLS*SDTVAF
Trigger: GAAGGCGACGGTGTCGGAGCAGCTCAGCCAGGATTT...TCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAACGATCAAGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR GCA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACGACCCAGGAAGAGCGTaGGCAGGCGTACTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: SESAVACLSSSIADSSDNDPGRA*AGVLAL
Trigger: CAGAGCGAGTACGCCTGCGCACGCTCTTCCTGGGTC...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CCA 90 bp ACTTGTTTCCTTTGCTGCGAGCTACTGAATATAGGCTTTTTGCCAAGTCTTCGATGGAGGCCCAGTACTTaGCCTCACTTGCCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: TCFLCCELLNIGFLPSLRWRPST*PHLPRP
Trigger: TGGGCGGGGCAAGTGAGGCCAAGTACTGGGCCTCCA...TCGAAGACTTGGCAAAAAGCCTATATTCAGTAGCTCGCAGCAAAGGAAACAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR TCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACATGGTGATGCTCGCTaGGGAATCAAGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: FNGFCGSGLQDDWSASASHGDAR*GIKWRC
Trigger: ACATCTCCACTTGATTCCTCAGCGAGCATCACCATG...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp AGATTCAGGACTCTCTCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACGGCCCCTTCCTTTaGAACCCCTTACTGCAAACT +
Preference number: 4 (lower is better)
Translates to: RFRTLSLMQNTSTQIPVTHGPFL*NPLLQT
Trigger: AGTTTGCAGTAAGGGGTTGCAAAGGAAGGGGCCGTG...GGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR GCA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCCGCCATGGTCAGTGCTaGTTCCGTCCACTTCACTCT +
Preference number: 4 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSRHGQC*FRPLHS
Trigger: AGAGTGAAGTGGACGGAAGCAGCACTGACCATGGCG...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CCA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGGAAGCTGAGACGCCATaGTCAGTGCTGCTTCCGTCC +
Preference number: 4 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVEAETP*SVLLPS
Trigger: GGACGGAAGCAGCACTGACCATGGCGTCTCAGCTTC...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACCATACTTGAATCTGTaGATCTGCTGGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FNGFCGSGLQDDWSASASPYLNL*ICWRVL
Trigger: CAGGACCCTCCAGCAGATCCACAGATTCAAGTATGG...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp GGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTTATTAATTGCCTGTGGTACTaGCTCACTACATCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GFCGSGLQDDWSASASLINCLWY*LTTSFA
Trigger: GGCAAAGGATGTAGTGAGCCAGTACCACAGGCAATT...AATAAGTGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCAATGGCTCTCTTTCACTaGACCTTCCTGAGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: FNGFCGSGLQDDWSASASMALFH*TFLRQN
Trigger: GTTCTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCAT...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AGATTCAGGACTCTCTCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCTCTTTGTCCTCTGCTaGGCTGCAGTACATCCATTG +
Preference number: 4 (lower is better)
Translates to: RFRTLSLMQNTSTQIPVTLFVLC*AAVHPL
Trigger: CAATGGATGTACTGCAGCTCAGCAGAGGACAAAGAG...GGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGGAGATTGTAGAGGTCTaGGGCAGAGCCTGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVEIVEV*GRACAL
Trigger: GAGAGCACAGGCTCTGCCTCAGACCTCTACAATCTC...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR GCA 90 bp TCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTTTGCAACCCCTTACTaGAAACTCCAGCGGACCCCA +
Preference number: 4 (lower is better)
Translates to: SLMQNTSTQIPVTHKWSFFATPY*KLQRTP
Trigger: TGGGGTCCGCTGGAGTTTGCAGTAAGGGGTTGCAAA...GAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR GCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTAGACGCCATGGTCAGTaGTGCTTCCGTCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSRRHGQ*CFRPLH
Trigger: GTGAAGTGGACGGAAGCAGCACTGACCATGGCGTCT...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR GCA 90 bp TCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTTGAATCTGTGGATCTaGTGGAGGGTCCTGCGATGC +
Preference number: 4 (lower is better)
Translates to: SLMQNTSTQIPVTHKWSFLNLWI*WRVLRC
Trigger: GCATCGCAGGACCCTCCAGCAGATCCACAGATTCAA...GAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp CTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACTGAAGCCGGACCGCGGTaGGGAGCCTCAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: LFRNTVLVVIITHIMKHTEAGPR*GASESQ
Trigger: CTGGGATTCTGAGGCTCCCCACCGCGGTCCGGCTTC...AGTATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGAAGCCGGACCGCGGTaGGGAGCCTCAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLEAGPR*GASESQ
Trigger: CTGGGATTCTGAGGCTCCCCACCGCGGTCCGGCTTC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCAAGAGTAACGTACTCTTaGGAGCTTTCAGCCCAACAG +
Preference number: 4 (lower is better)
Translates to: FNGFCGSGLQDDWSASASRVTYS*ELSAQQ
Trigger: CTGTTGGGCTGAAAGCTCCCAAGAGTACGTTACTCT...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CCA 90 bp GGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTTATTGTTTTTGAAGGCCGATaGTCATACATGCGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: GFCGSGLQDDWSASASLIVFEGR*SYMRVC
Trigger: ACAAACCCGCATGTATGACCATCGGCCTTCAAAAAC...AATAAGTGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp GACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGCCTAGGGTAAAAGGTTaGCGCCTCTCGTCGGTTTGT +
Preference number: 4 (lower is better)
Translates to: DTASWNIFSFPRVNYCRSPRVKG*RLSSVC
Trigger: ACAAACCGACGAGAGGCGTCAACCTTTTACCCTAGG...CGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR TCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGTCAGGACTCTCTCGCTaGTGCAGAACACCAGTACTC +
Preference number: 4 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLSGLSR*CRTPVL
Trigger: GAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGA...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGTCAGGACTCTCTCGCTaGTGCAGAACACCAGTACTC +
Preference number: 4 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVSGLSR*CRTPVL
Trigger: GAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGA...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCATCTCTTTCCCTAGAGTaGACTATTGCAGATCGAGAC +
Preference number: 4 (lower is better)
Translates to: FNGFCGSGLQDDWSASASSLSLE*TIADRD
Trigger: GTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGA...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AGATTCAGGACTCTCTCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCTGGAGACAGGGTTTTTaGAGGCCGATGGTCATACAT +
Preference number: 4 (lower is better)
Translates to: RFRTLSLMQNTSTQIPVTWRQGF*RPMVIH
Trigger: ATGTATGACCATCGGCCTTCAAAAACCCTGTCTCCA...GGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp CTTTTTCTTGATCGTTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAATTCTTCTGTCCAGTTaGTGCTGCTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LFLDRLMAFVGQACRMTGILLSS*CCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAACTGGACAGAAGAAT...TCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAACGATCAAGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp AGATTCAGGACTCTCTCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCTGTCCTCTGCTGAGCTaGAGTACATCCATTGCTAGT +
Preference number: 4 (lower is better)
Translates to: RFRTLSLMQNTSTQIPVTCPLLS*STSIAS
Trigger: ACTAGCAATGGATGTACTGCAGCTCAGCAGAGGACA...GGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp AGATTCAGGACTCTCTCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCTCGAAGAAGCTGTCTaGTTCTACTGGATAGGACGT +
Preference number: 4 (lower is better)
Translates to: RFRTLSLMQNTSTQIPVTLEEAV*FYWIGR
Trigger: ACGTCCTATCCAGTAGAAGCAGACAGCTTCTTCGAG...GGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGGCCGATGGTCATACATaGGGGTTTGTGCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVADGHT*GFVPVC
Trigger: ACACACTGGCACAAACCCGCATGTATGACCATCGGC...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTGGAGGCCCAGTACTTaGCCTCACTTGCCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLWRPST*PHLPRP
Trigger: TGGGCGGGGCAAGTGAGGCCAAGTACTGGGCCTCCA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGACCCCAGAAGTACCATaGGGGCCGCACTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLTPEVP*GPHCLP
Trigger: GGGAAGGCAGTGCGGCCCCCATGGTACTTCTGGGGT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCAGCTGTCTGCTTCTACTaGATAGGACGTCTATTGTGT +
Preference number: 4 (lower is better)
Translates to: FNGFCGSGLQDDWSASASAVCFY*IGRLLC
Trigger: ACACAATAGACGTCCTATCCAGTAGAAGCAGACAGC...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp GGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTTATTCACCATGTCACATATTaGATACTGCGAGCTACTGAA +
Preference number: 4 (lower is better)
Translates to: GFCGSGLQDDWSASASLIHHVTY*ILRATE
Trigger: TTCAGTAGCTCGCAGTATCCAATATGTGACATGGTG...AATAAGTGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR TCA 90 bp GGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTTATTCACACTTTGGAAAACTaGTGTCAAGTTGCTTTTGTG +
Preference number: 4 (lower is better)
Translates to: GFCGSGLQDDWSASASLIHTLEN*CQVAFV
Trigger: CACAAAAGCAACTTGACATCAGTTTTCCAAAGTGTG...AATAAGTGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR TCA 90 bp CTTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTGGTCCAAAGGGTCCTGCGATGCTaGGGCATGGTGAATCCTTCC +
Preference number: 4 (lower is better)
Translates to: LDHFSLRCLFLCSCIVVQRVLRC*GMVNPS
Trigger: GGAAGGATTCACCATGCCTCAGCATCGCAGGACCCT...TTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGGGAAGGCTGAGTTTTTaGTATAACCTGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQGRLSF*YNLSRR
Trigger: CCTCCTGGACAGGTTATATCAAAAACTCAGCCTTCC...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTATTGTCCACTCGCCTTaGGGCGAACAATCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSIVHSP*GEQSSE
Trigger: CTCTGAAGATTGTTCGCCTCAAGGCGAGTGGACAAT...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGATTCTTCTGTCCAGTTaGTGCTGCTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLILLSS*CCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAACTGGACAGAAGAAT...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp ACTTGTTTCCTTTGCTGCGAGCTACTGAATATAGGCTTTTTGCCAAGTCTTCGATTTGTGGGTCAGGCCTaGAGGATGACTGGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: TCFLCCELLNIGFLPSLRFVGQA*RMTGVL
Trigger: AAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAA...TCGAAGACTTGGCAAAAAGCCTATATTCAGTAGCTCGCAGCAAAGGAAACAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR GCA 90 bp GGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTTATTCCTAGAGTGAACTATTaGAGATCGAGACCAAATTTC +
Preference number: 4 (lower is better)
Translates to: GFCGSGLQDDWSASASLIPRVNY*RSRPNF
Trigger: GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGG...AATAAGTGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGCATTTAAGTTTCCTGTaGGTACCTTGGGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLHLSFL*VPWVWH
Trigger: GTGCCAGACCCAAGGTACTCACAGGAAACTTAAATG...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAGGGTCCTGCGATGCTaGGGCATGGTGAATCCTTCC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLRVLRC*GMVNPS
Trigger: GGAAGGATTCACCATGCCTCAGCATCGCAGGACCCT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGTCAGGCCTGCAGGATaGCTGGAGTGCTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLVRPAG*LECFCI
Trigger: GATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGAC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp GACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTAGTAGAGGTCAGGCCTGCAGGATaGCTGGAGTGCTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: DECPDAPNPSDFIFLLVEVRPAG*LECFCI
Trigger: GATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGAC...CTCTACTAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AGATTCAGGACTCTCTCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCTCACTCCCAACAGAATaGCAACATATGTTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RFRTLSLMQNTSTQIPVTSLPTE*QHMLAA
Trigger: TGCAGCTAACATATGTTGTCATTCTGTTGGGAGTGA...GGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCGATACCTCTGTCATTTaGCCCATCATCATCCTGAGA +
Preference number: 4 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSDTSVI*PIIILR
Trigger: TCTCAGGATGATGATGGGTCAAATGACAGAGGTATC...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCTCTCTTTCCCTAGAGTaGACTATTGCAGATCGAGAC +
Preference number: 4 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSSLSLE*TIADRD
Trigger: GTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGA...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGACTTCTCCTTCATCTaGTCCCAGCTCTTCACATTC +
Preference number: 4 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLDFSFI*SQLFTF
Trigger: GAATGTGAAGAGCTGGGATCAGATGAAGGAGAAGTC...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACATTGTCCACTCGCCTTaGGGCGAACAATCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SESAVACLSSSIADSSDNIVHSP*GEQSSE
Trigger: CTCTGAAGATTGTTCGCCTCAAGGCGAGTGGACAAT...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGTACTTGGCCTCACTTaGCCCGCCCAGGAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLVLGLT*PAQEEE
Trigger: TTCTTCCTCCTGGGCGGGGCAAGTGAGGCCAAGTAC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAAATCCTGGCTGAGCTaGTCCGACACCGTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLKSWLS*SDTVAF
Trigger: GAAGGCGACGGTGTCGGAGCAGCTCAGCCAGGATTT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR GCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTCTCGAAGAAGCTGTCTaGTTCTACTGGATAGGACGT +
Preference number: 4 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSLEEAV*FYWIGR
Trigger: ACGTCCTATCCAGTAGAAGCAGACAGCTTCTTCGAG...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACACTATCCAAGAATTTaGTGCGTTGCTGAATGTCAT +
Preference number: 4 (lower is better)
Translates to: FNGFCGSGLQDDWSASASHYPRI*CVAECH
Trigger: ATGACATTCAGCAACGCAGCAAATTCTTGGATAGTG...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCATACATGCGGGTTTGTaGCAGTGTGTCACAATCATC +
Preference number: 4 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSIHAGL*QCVTII
Trigger: GATGATTGTGACACACTGGCACAAACCCGCATGTAT...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGAAGCTGAGACGCCATaGTCAGTGCTGCTTCCGTCC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLEAETP*SVLLPS
Trigger: GGACGGAAGCAGCACTGACCATGGCGTCTCAGCTTC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCATCTTTTCTCCCTACTTaGTTCTCCCTATCTGATATC +
Preference number: 4 (lower is better)
Translates to: FNGFCGSGLQDDWSASASSFLPT*FSLSDI
Trigger: GATATCAGATAGGGAGAACCAAGTAGGGAGAAAAGA...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCCACAAATGGAGTTTCTaGAGTTTCATGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSHKWSF*SFMALW
Trigger: CCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTG...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp CTTTTTCTTGATCGTTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGACACAAATGGAGTTTCTaGAGTTTCATGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LFLDRLMAFVGQACRMTGHKWSF*SFMALW
Trigger: CCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTG...TCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAACGATCAAGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp CTTTTTCTTGATCGTTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGACCAGTGACCCACAAATaGAGTTTCTGGAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: LFLDRLMAFVGQACRMTGPVTHK*SFWSFM
Trigger: CATGAAACTCCAGAAACTCCATTTGTGGGTCACTGG...TCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAACGATCAAGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCATGTAGAGCTGTTCTTTaGTATGTCAGAATTGGGTTC +
Preference number: 4 (lower is better)
Translates to: FNGFCGSGLQDDWSASASCRAVL*YVRIGF
Trigger: GAACCCAATTCTGACATACCAAAGAACAGCTCTACA...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CAA 72 bp ATGCTGAGTTTCCAGTTCCAGAATTGTCCACTCGCCTaGAGGCGAACAATCTTCAGAGGAAAAACTAGCCAT +
Preference number: 4 (lower is better)
Translates to: MLSFQFQNCPLA*RRTIFRGKTSH
Trigger: ATGGCTAGTTTTTCCTCTGAAGATTGTTCGCCTCAAGGCGAGTGGACAATTCTGGAACTGGAAACTCAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp CTTTTTCTTGATCGTTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAATTTCTATTGGTACTTaGCGAATGTCCAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: LFLDRLMAFVGQACRMTGISIGT*RMSRCS
Trigger: GGAGCATCTGGACATTCGTCAAGTACCAATAGAAAT...TCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAACGATCAAGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGTGCTGCTGCTGTTGCTaGTCTTTCTACAACTTGTCT +
Preference number: 4 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLCCCCC*SFYNLS
Trigger: AGACAAGTTGTAGAAAGATCAGCAACAGCAGCAGCA...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGTGCTGCTGCTGTTGCTaGTCTTTCTACAACTTGTCT +
Preference number: 4 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVCCCCC*SFYNLS
Trigger: AGACAAGTTGTAGAAAGATCAGCAACAGCAGCAGCA...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AAAATTGCCTGTGGTACTGGCTCACTACATCCTTTGCCACTGACTTTCTTTAGTGGAAGGCTGAGTTTTTaGTATAACCTGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KIACGTGSLHPLPLTFFSGRLSF*YNLSRR
Trigger: CCTCCTGGACAGGTTATATCAAAAACTCAGCCTTCC...ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCCAGTACCACAGGCAATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGCTTTGGGAGGAAGGCTaGGTTTTTGATATAACCTGT +
Preference number: 4 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQLWEEG*VFDITC
Trigger: ACAGGTTATATCAAAAACTCAGCCTTCCTCCCAAAG...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AGAGAGATAACTCCAACACTCTTTCTTGTTATTTCCCCTCCAAGATTTGATTTTGTCAGGCCTGCAGGATaGCTGGAGTGCTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: REITPTLFLVISPPRFDFVRPAG*LECFCI
Trigger: GATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGAC...AAAATCAAATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAGTTATCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp TCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTTGGTTCTCCCTATCTaGTATCAAATGGATTTGCCC +
Preference number: 4 (lower is better)
Translates to: SLMQNTSTQIPVTHKWSFLVLPI*YQMDLP
Trigger: GGGCAAATCCATTTGATATCAGATAGGGAGAACCAA...GAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AGATTCAGGACTCTCTCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCATATGTGTTATACCCTaGGGTTTTGAGCTATCTCGT +
Preference number: 4 (lower is better)
Translates to: RFRTLSLMQNTSTQIPVTICVIP*GFELSR
Trigger: ACGAGATAGCTCAAAACCTCAGGGTATAACACATAT...GGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCGCCATGGTCAGTGCTaGTTCCGTCCACTTCACTCT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLRHGQC*FRPLHS
Trigger: AGAGTGAAGTGGACGGAAGCAGCACTGACCATGGCG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAGACGCCATGGTCAGTaGTGCTTCCGTCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLRRHGQ*CFRPLH
Trigger: GTGAAGTGGACGGAAGCAGCACTGACCATGGCGTCT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
CDS-3UTR GCA 90 bp GTCTTCGATCATCACCTTTGTCAAATGCAGCTGCTTGGATTTTCTGTTGATCATCCAACAGATCGGCTGTaGTGCTCATTGCTTGTGACT +
Preference number: 4 (lower is better)
Translates to: VFDHHLCQMQLLGFSVDHPTDRL*CSLLVT
Trigger: AGTCACAAGCAATGAGCAGCACAGCCGATCTGTTGG...ATGATCAACAGAAAATCCAAGCAGCTGCATTTGACAAAGGTGATGATCGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR GCA 90 bp GGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTTATTGATGTTCATGAGAAATaGCATCAAAAACATCAGAAG +
Preference number: 4 (lower is better)
Translates to: GFCGSGLQDDWSASASLIDVHEK*HQKHQK
Trigger: CTTCTGATGTTTTTGATGGCATTTCTCATGAACATC...AATAAGTGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTATCTGATATCAAATaGATTTGCCCTGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: FNGFCGSGLQDDWSASASLSDIK*ICPALV
Trigger: AACAAGTGCAGGGCAAATCCATTTGATATCAGATAG...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCGTTTCTGGAGTTTCATaGCTCTCTGGAGATTCTGAT +
Preference number: 4 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSVSGVS*LSGDSD
Trigger: ATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAAC...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGTTTTTGAAGGCCGATaGTCATACATGCGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLVFEGR*SYMRVC
Trigger: ACAAACCCGCATGTATGACCATCGGCCTTCAAAAAC...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CAA 72 bp CTATTACATCCATCTCATATATTGGAGACAGGGTTTTaGAAGGCCGATGGTCATACATGCGGGTTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LLHPSHILETGF*KADGHTCGFVP
Trigger: TGGCACAAACCCGCATGTATGACCATCGGCCTTCAAAAACCCTGTCTCCAATATATGAGATGGATGTAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCCTAGGGTAAAAGGTTaGCGCCTCTCGTCGGTTTGT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLPRVKG*RLSSVC
Trigger: ACAAACCGACGAGAGGCGTCAACCTTTTACCCTAGG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR TCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTACTTTCCACTCCAACTaGATGAGCAATAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSTFHSN*MSNNQA
Trigger: TGCCTGATTATTGCTCATTCAGTTGGAGTGGAAAGT...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR TCA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGCTCTTTGTCCTCTGCTaGGCTGCAGTACATCCATTG +
Preference number: 4 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMLFVLC*AAVHPL
Trigger: CAATGGATGTACTGCAGCTCAGCAGAGGACAAAGAG...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGTACTCAAATTCCAGTaGCCCACAAATGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLVLKFQ*PTNGVS
Trigger: AGAAACTCCATTTGTGGGTCACTGGAATTTGAGTAC...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTCAGGACTCTCTCGCTaGTGCAGAACACCAGTACTC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSGLSR*CRTPVL
Trigger: GAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTTGCAACCCCTTACTaGAAACTCCAGCGGACCCCA +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLFATPY*KLQRTP
Trigger: TGGGGTCCGCTGGAGTTTGCAGTAAGGGGTTGCAAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR GCA 90 bp GACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGCTCAGGAGGTATATTTaGAAAGCTTCTCTCAGACCA +
Preference number: 4 (lower is better)
Translates to: DTASWNIFSFPRVNYCRSLRRYI*KASLRP
Trigger: TGGTCTGAGAGAAGCTTTGCAAATATACCTCCTGAG...CGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTGAATCTGTGGATCTaGTGGAGGGTCCTGCGATGC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLNLWI*WRVLRC
Trigger: GCATCGCAGGACCCTCCAGCAGATCCACAGATTCAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp GACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTAGTAGAGTTGAATCTGTGGATCTaGTGGAGGGTCCTGCGATGC +
Preference number: 4 (lower is better)
Translates to: DECPDAPNPSDFIFLLVELNLWI*WRVLRC
Trigger: GCATCGCAGGACCCTCCAGCAGATCCACAGATTCAA...CTCTACTAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTTGTGGGTCAGGCCTaGAGGATGACTGGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLFVGQA*RMTGVL
Trigger: AAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp CTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACTTTTGTGGGTCAGGCCTaGAGGATGACTGGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LFRNTVLVVIITHIMKHTFVGQA*RMTGVL
Trigger: AAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAA...AGTATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp TCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCCACTATCCAAGAATTTaGTGCGTTGCTGAATGTCAT +
Preference number: 4 (lower is better)
Translates to: SLMQNTSTQIPVTHKWSFHYPRI*CVAECH
Trigger: ATGACATTCAGCAACGCAGCAAATTCTTGGATAGTG...GAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGCCGATGGTCATACATaGGGGTTTGTGCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLADGHT*GFVPVC
Trigger: ACACACTGGCACAAACCCGCATGTATGACCATCGGC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAACCATACTTGAATCTGTaGATCTGCTGGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PYLISNGFALHLLSLNHKPYLNL*ICWRVL
Trigger: CAGGACCCTCCAGCAGATCCACAGATTCAAGTATGG...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AAAATTGCCTGTGGTACTGGCTCACTACATCCTTTGCCACTGACTTTCTTTAGTCTTCAAAATTGCCTGTaGTACTGGCTCACTACATCC +
Preference number: 4 (lower is better)
Translates to: KIACGTGSLHPLPLTFFSLQNCL*YWLTTS
Trigger: GGATGTAGTGAGCCAGTACCACAGGCAATTTTGAAG...ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCCAGTACCACAGGCAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTCTTCCAAGAAAATCATaGCACAGCATAGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSLPRKS*HSIVPH
Trigger: ATGTGGCACTATGCTGTGCCATGATTTTCTTGGAAG...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAAATGGCTCTCTTTCACTaGACCTTCCTGAGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: PYLISNGFALHLLSLNHKMALFH*TFLRQN
Trigger: GTTCTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCAT...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp GACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGTCAGTAGTTGTAGAATaGCTCTCTTTCACTGGACCT +
Preference number: 4 (lower is better)
Translates to: DTASWNIFSFPRVNYCRSSVVVE*LSFTGP
Trigger: AGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGA...CGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp CTTTTTCTTGATCGTTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTCAAGTTGCTTTTGTaGTATCCCAATCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: LFLDRLMAFVGQACRMTGVKLLL*YPNLHY
Trigger: ATAATGGAGATTGGGATATCACAAAAGCAACTTGAC...TCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAACGATCAAGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGATGCTGAGGCATGGTaGATCCTTCCCTGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLDAEAW*ILPCSF
Trigger: AAAGCTACAGGGAAGGATTCACCATGCCTCAGCATC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp CTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATGATGCTGAGGCATGGTaGATCCTTCCCTGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: LLFRNTVLVVIITHIMKHDAEAW*ILPCSF
Trigger: AAAGCTACAGGGAAGGATTCACCATGCCTCAGCATC...ATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTCTTTGTCCTCTGCTaGGCTGCAGTACATCCATTG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLFVLC*AAVHPL
Trigger: CAATGGATGTACTGCAGCTCAGCAGAGGACAAAGAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGTCTCCTTGGGATCCTTaGGTTTTAGTAAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQSPWDP*VLVRLD
Trigger: ATCTAATCTTACTAAAACTCAAGGATCCCAAGGAGA...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AAAATTGCCTGTGGTACTGGCTCACTACATCCTTTGCCACTGACTTTCTTTAGTTTGGTTCTCCCTATCTaGTATCAAATGGATTTGCCC +
Preference number: 4 (lower is better)
Translates to: KIACGTGSLHPLPLTFFSLVLPI*YQMDLP
Trigger: GGGCAAATCCATTTGATATCAGATAGGGAGAACCAA...ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCCAGTACCACAGGCAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AAAATTGCCTGTGGTACTGGCTCACTACATCCTTTGCCACTGACTTTCTTTAGTCTTGGAAGATACATCTaGGTCTGCTGTAGCATGTTT +
Preference number: 4 (lower is better)
Translates to: KIACGTGSLHPLPLTFFSLGRYI*VCCSMF
Trigger: AAACATGCTACAGCAGACTCAGATGTATCTTCCAAG...ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCCAGTACCACAGGCAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTGCTCTCTGGAGATTCTaGTGTTTCCATATTTTTAGG +
Preference number: 4 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSALWRF*CFHIFR
Trigger: CCTAAAAATATGGAAACATCAGAATCTCCAGAGAGC...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp ACTTGTTTCCTTTGCTGCGAGCTACTGAATATAGGCTTTTTGCCAAGTCTTCGAATCTTCACTTTCTCGTaGGAATCTGGAATAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TCFLCCELLNIGFLPSLRIFTFS*ESGIAG
Trigger: ACCTGCTATTCCAGATTCTCACGAGAAAGTGAAGAT...TCGAAGACTTGGCAAAAAGCCTATATTCAGTAGCTCGCAGCAAAGGAAACAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR TCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTAATTTGCTGCGTTGCTaGATGTCATTTTCCACATTG +
Preference number: 4 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSNLLRC*MSFSTL
Trigger: CAATGTGGAAAATGACATTCAGCAACGCAGCAAATT...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCATGGTGATGCTCGCTaGGGAATCAAGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLHGDAR*GIKWRC
Trigger: ACATCTCCACTTGATTCCTCAGCGAGCATCACCATG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGATTGTCCACTCGCCTTaGGGCGAACAATCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLIVHSP*GEQSSE
Trigger: CTCTGAAGATTGTTCGCCTCAAGGCGAGTGGACAAT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCCAACAGATCGGCTGTaGTGCTCATTGCTTGTGACT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLPTDRL*CSLLVT
Trigger: AGTCACAAGCAATGAGCAGCACAGCCGATCTGTTGG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGATTCTTCTGTCCAGTTaGTGCTGCTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLILLSS*CCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAACTGGACAGAAGAAT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp CTTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTGGTCCAATGTCCTCTGCTGAGCTaGAGTACATCCATTGCTAGT +
Preference number: 4 (lower is better)
Translates to: LDHFSLRCLFLCSCIVVQCPLLS*STSIAS
Trigger: ACTAGCAATGGATGTACTGCAGCTCAGCAGAGGACA...TTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp GACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGGATATCAAATGGATTTaGCCTGCACTTGTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: DTASWNIFSFPRVNYCRSDIKWI*PALVES
Trigger: AGACTCAACAAGTGCAGGGCAAATCCATTTGATATC...CGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp TCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCGAGTACTGGTATCACTaGTACTTCTTCCAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: SLMQNTSTQIPVTHKWSFEYWYH*YFFQEN
Trigger: ATTTTCTTGGAAGAAGTAGCAGTGATACCAGTACTC...GAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGCCTAGAGTGAACTATTaGAGATCGAGACCAAATTTC +
Preference number: 4 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLPRVNY*RSRPNF
Trigger: GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGG...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp GACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGTGTTCAGAGAGCAGTTaGTTTAGTAGTGTCCAATCT +
Preference number: 4 (lower is better)
Translates to: DTASWNIFSFPRVNYCRSCSESS*FSSVQS
Trigger: AGATTGGACACTACTAAAGCAACTGCTCTCTGAACA...CGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp TCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTACTATGTTACCCTATaGAGAGCAAAAAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: SLMQNTSTQIPVTHKWSFYYVTL*RAKSKG
Trigger: CCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTA...GAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp CTTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTGGTCCAATTATCACGCAGAGCCTaGATCTTGCACGTAAAACCC +
Preference number: 4 (lower is better)
Translates to: LDHFSLRCLFLCSCIVVQLSRRA*ILHVKP
Trigger: GGGTTTTACGTGCAAGATCCAGGCTCTGCGTGATAA...TTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CCA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCTCAAAGGCTTTGCTTTaGCTTGCACATTTAAGTTTC +
Preference number: 4 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSSKALL*LAHLSF
Trigger: GAAACTTAAATGTGCAAGCCAAAGCAAAGCCTTTGA...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCCATACTTGAATCTGTaGATCTGCTGGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLPYLNL*ICWRVL
Trigger: CAGGACCCTCCAGCAGATCCACAGATTCAAGTATGG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACGTCCCGAAAAACACTTaGAAGATACATCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SESAVACLSSSIADSSDNVPKNT*KIHLSL
Trigger: CAGACTCAGATGTATCTTCCAAGTGTTTTTCGGGAC...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp GACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGATTCTTCAGGAGTACTaGTATCACTGCTACTTCTTC +
Preference number: 4 (lower is better)
Translates to: DTASWNIFSFPRVNYCRSILQEY*YHCYFF
Trigger: GAAGAAGTAGCAGTGATACCAGTACTCCTGAAGAAT...CGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACTTTCTCGTGAGAATCTaGAATAGCAGGTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SESAVACLSSSIADSSDNFLVRI*NSRSFH
Trigger: ATGGAAGGACCTGCTATTCCAGATTCTCACGAGAAA...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGATGGCTCTCTTTCACTaGACCTTCCTGAGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLMALFH*TFLRQN
Trigger: GTTCTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCAT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
3UTR CAA 72 bp TGTTTCCTTTGCTGCGAGCTACTGAATATAGGCTTTTaGCCAAGTCTTCGATCATCACCTTTGTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: CFLCCELLNIGF*PSLRSSPLSNA
Trigger: TGCATTTGACAAAGGTGATGATCGAAGACTTGGCAAAAAGCCTATATTCAGTAGCTCGCAGCAAAGGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR CAA 72 bp TGTGGTCCAACTTTGCCACATTTTCATCAGACTGCCTaGAAGAGACTGAAGATTTTACTGAGTTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: CGPTLPHFHQTA*KRLKILLSLVT
Trigger: AGTCACCAAACTCAGTAAAATCTTCAGTCTCTTCAAGGCAGTCTGATGAAAATGTGGCAAAGTTGGACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCAGCTTGGATTTTCTGTTaGTCATCTGTGCTCATCAGC +
Preference number: 4 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSAWIFC*SSVLIS
Trigger: GCTGATGAGCACAGATGATCAACAGAAAATCCAAGC...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCCCCTCCAAGATTTaGTTTTTATATCACCAGAGT +
Preference number: 4 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSFPSKI*FLYHQS
Trigger: ACTCTGGTGATATAAAAATCAAATCTTGGAGGGGAA...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCATTTAAGTTTCCTGTaGGTACCTTGGGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLHLSFL*VPWVWH
Trigger: GTGCCAGACCCAAGGTACTCACAGGAAACTTAAATG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp CTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACTCATTTAAGTTTCCTGTaGGTACCTTGGGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LFRNTVLVVIITHIMKHTHLSFL*VPWVWH
Trigger: GTGCCAGACCCAAGGTACTCACAGGAAACTTAAATG...AGTATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp GTACTTGACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTAGATGCTGAGGCATGGTaGATCCTTCCCTGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: VLDECPDAPNPSDFIFLLDAEAW*ILPCSF
Trigger: AAAGCTACAGGGAAGGATTCACCATGCCTCAGCATC...TAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTCAAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGGAAGGCTGAGTTTTTaGTATAACCTGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLGRLSF*YNLSRR
Trigger: CCTCCTGGACAGGTTATATCAAAAACTCAGCCTTCC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACGCTCTCTGGAGATTCTaGTGTTTCCATATTTTTAGG +
Preference number: 4 (lower is better)
Translates to: SESAVACLSSSIADSSDNALWRF*CFHIFR
Trigger: CCTAAAAATATGGAAACATCAGAATCTCCAGAGAGC...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGACTTCTCCTTCATCTaGTCCCAGCTCTTCACATTC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLDFSFI*SQLFTF
Trigger: GAATGTGAAGAGCTGGGATCAGATGAAGGAGAAGTC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp CTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACTGACTTCTCCTTCATCTaGTCCCAGCTCTTCACATTC +
Preference number: 4 (lower is better)
Translates to: LFRNTVLVVIITHIMKHTDFSFI*SQLFTF
Trigger: GAATGTGAAGAGCTGGGATCAGATGAAGGAGAAGTC...AGTATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp CTTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTGGTCCAAGAATCTACAGAAGCCTaGAAGGGAGTATGGACTTCT +
Preference number: 4 (lower is better)
Translates to: LDHFSLRCLFLCSCIVVQESTEA*KGVWTS
Trigger: AGAAGTCCATACTCCCTTTCAGGCTTCTGTAGATTC...TTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTGGAGACAGGGTTTTTaGAGGCCGATGGTCATACAT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLWRQGF*RPMVIH
Trigger: ATGTATGACCATCGGCCTTCAAAAACCCTGTCTCCA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGTGTAACATGTGTTTCTaGTTCCACTTTCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLCNMCF*FHFLLK
Trigger: TTTGAGCAGAAAGTGGAATCAGAAACACATGTTACA...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGGCTAAAAGTAGTGTCTaGTTGATTAGATACTGTGCT +
Preference number: 4 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVAKSSV*LIRYCA
Trigger: AGCACAGTATCTAATCAATCAGACACTACTTTTAGC...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGACAGATCGGCTGTGCTaGTCATTGCTTGTGACTGTA +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLTDRLC*SLLVTV
Trigger: TACAGTCACAAGCAATGAGCAGCACAGCCGATCTGT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
CDS-3UTR GCA 90 bp GTCTTCGATCATCACCTTTGTCAAATGCAGCTGCTTGGATTTTCTGTTGATCATACTTGTTTCCTTTGCTaGGAGCTACTGAATATAGGC +
Preference number: 4 (lower is better)
Translates to: VFDHHLCQMQLLGFSVDHTCFLC*ELLNIG
Trigger: GCCTATATTCAGTAGCTCGCAGCAAAGGAAACAAGT...ATGATCAACAGAAAATCCAAGCAGCTGCATTTGACAAAGGTGATGATCGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTGTCCTCTGCTGAGCTaGAGTACATCCATTGCTAGT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLCPLLS*STSIAS
Trigger: ACTAGCAATGGATGTACTGCAGCTCAGCAGAGGACA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGACATTTTCATCAGACTaGCTTGAAGAGACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVTFSSD*LEETED
Trigger: ATCTTCAGTCTCTTCAAGGCAGTCTGATGAAAATGT...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGAAAGCTGTGTGTACTTaGTTGACCATTTTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQKAVCT*LTIFLL
Trigger: TAAGAGAAAAATGGTCAAGCAAGTACACACAGCTTT...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTCATTGCCACTATTTTTaGATTAACCTTAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSHCHYF*INLRQS
Trigger: GCTTTGCCTAAGGTTAATGCAAAAATAGTGGCAATG...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGACAACATATGTTAGCTaGATCGCAATCATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLTTYVS*IAIICF
Trigger: GAAACAGATGATTGCGATGCAGCTAACATATGTTGT...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp CTTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTGGTCCAAGAGCAAACTGGACACTaGCTCGTGGAATATTTTCTC +
Preference number: 4 (lower is better)
Translates to: LDHFSLRCLFLCSCIVVQEQTGH*LVEYFL
Trigger: GAGAAAATATTCCACGAGGCAGTGTCCAGTTTGCTC...TTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTCGAAGAAGCTGTCTaGTTCTACTGGATAGGACGT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLEEAV*FYWIGR
Trigger: ACGTCCTATCCAGTAGAAGCAGACAGCTTCTTCGAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp CTTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTGGTCCAAATACATGCGGGTTTGTaGCAGTGTGTCACAATCATC +
Preference number: 4 (lower is better)
Translates to: LDHFSLRCLFLCSCIVVQIHAGL*QCVTII
Trigger: GATGATTGTGACACACTGGCACAAACCCGCATGTAT...TTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAGAGTAACGTACTCTTaGGAGCTTTCAGCCCAACAG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLRVTYS*ELSAQQ
Trigger: CTGTTGGGCTGAAAGCTCCCAAGAGTACGTTACTCT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTATCACGCAGAGCCTaGATCTTGCACGTAAAACCC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLSRRA*ILHVKP
Trigger: GGGTTTTACGTGCAAGATCCAGGCTCTGCGTGATAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAATTGCCTGTGGTACTaGCTCACTACATCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLNCLWY*LTTSFA
Trigger: GGCAAAGGATGTAGTGAGCCAGTACCACAGGCAATT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGCTTCAAAATTGCCTGTaGTACTGGCTCACTACATCC +
Preference number: 4 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMLQNCL*YWLTTS
Trigger: GGATGTAGTGAGCCAGTACCACAGGCAATTTTGAAG...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGCTATCTGATATCAAATaGATTTGCCCTGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLLSDIK*ICPALV
Trigger: AACAAGTGCAGGGCAAATCCATTTGATATCAGATAG...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCAGCTGTCTGCTTCTACTaGATAGGACGTCTATTGTGT +
Preference number: 4 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSAVCFY*IGRLLC
Trigger: ACACAATAGACGTCCTATCCAGTAGAAGCAGACAGC...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTGCTTTGTGTGCTTTaGACAAAGTACAACCCACAG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLLCVL*TKYNPQ
Trigger: CTGTGGGTTGTACTTTGTTCAAAGCACACAAAGCAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGCTTGGATTTTCTGTTaGTCATCTGTGCTCATCAGC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLAWIFC*SSVLIS
Trigger: GCTGATGAGCACAGATGATCAACAGAAAATCCAAGC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTACAACTTGTCTAGGTaGCATGTTTTCCAACCGTGC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLYNLSR*HVFQPC
Trigger: GCACGGTTGGAAAACATGTCACCTAGACAAGTTGTA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp CTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATTACAACTTGTCTAGGTaGCATGTTTTCCAACCGTGC +
Preference number: 4 (lower is better)
Translates to: LLFRNTVLVVIITHIMKHYNLSR*HVFQPC
Trigger: GCACGGTTGGAAAACATGTCACCTAGACAAGTTGTA...ATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp CTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACTTACAACTTGTCTAGGTaGCATGTTTTCCAACCGTGC +
Preference number: 4 (lower is better)
Translates to: LFRNTVLVVIITHIMKHTYNLSR*HVFQPC
Trigger: GCACGGTTGGAAAACATGTCACCTAGACAAGTTGTA...AGTATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTGCTGCTGCTGTTGCTaGTCTTTCTACAACTTGTCT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLCCCCC*SFYNLS
Trigger: AGACAAGTTGTAGAAAGATCAGCAACAGCAGCAGCA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAACTTTGGGAGGAAGGCTaGGTTTTTGATATAACCTGT +
Preference number: 4 (lower is better)
Translates to: PYLISNGFALHLLSLNHKLWEEG*VFDITC
Trigger: ACAGGTTATATCAAAAACTCAGCCTTCCTCCCAAAG...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACCATAGCAGATTCATCTaGCAACTTACTAGGAATTGT +
Preference number: 4 (lower is better)
Translates to: SESAVACLSSSIADSSDNHSRFI*QLTRNC
Trigger: ACAATTCCTAGTAAGTTGTCAGATGAATCTGCTATG...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGATACCTCTGTCATTTaGCCCATCATCATCCTGAGA +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLDTSVI*PIIILR
Trigger: TCTCAGGATGATGATGGGTCAAATGACAGAGGTATC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp CTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACTGATACCTCTGTCATTTaGCCCATCATCATCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LFRNTVLVVIITHIMKHTDTSVI*PIIILR
Trigger: TCTCAGGATGATGATGGGTCAAATGACAGAGGTATC...AGTATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTCTCTTTCCCTAGAGTaGACTATTGCAGATCGAGAC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSLSLE*TIADRD
Trigger: GTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AAAATTGCCTGTGGTACTGGCTCACTACATCCTTTGCCACTGACTTTCTTTAGTTTCTGTTTCATCTGCTaGAGAAGATACCTGATCTAT +
Preference number: 4 (lower is better)
Translates to: KIACGTGSLHPLPLTFFSFCFIC*RRYLIY
Trigger: ATAGATCAGGTATCTTCTTCAGCAGATGAAACAGAA...ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCCAGTACCACAGGCAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGAATCTACAGAAGCCTaGAAGGGAGTATGGACTTCT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLESTEA*KGVWTS
Trigger: AGAAGTCCATACTCCCTTTCAGGCTTCTGTAGATTC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCGAATCTACAGAAGCCTaGAAGGGAGTATGGACTTCT +
Preference number: 4 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFESTEA*KGVWTS
Trigger: AGAAGTCCATACTCCCTTTCAGGCTTCTGTAGATTC...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTTGGAGACAGGGTTTTTaGAGGCCGATGGTCATACAT +
Preference number: 4 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFWRQGF*RPMVIH
Trigger: ATGTATGACCATCGGCCTTCAAAAACCCTGTCTCCA...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACTGTAACATGTGTTTCTaGTTCCACTTTCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: SESAVACLSSSIADSSDNCNMCF*FHFLLK
Trigger: TTTGAGCAGAAAGTGGAATCAGAAACACATGTTACA...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp GTCTTCGATCATCACCTTTGTCAAATGCAGCTGCTTGGATTTTCTGTTGATCATATATGTGTTATACCCTaGGGTTTTGAGCTATCTCGT +
Preference number: 4 (lower is better)
Translates to: VFDHHLCQMQLLGFSVDHICVIP*GFELSR
Trigger: ACGAGATAGCTCAAAACCTCAGGGTATAACACATAT...ATGATCAACAGAAAATCCAAGCAGCTGCATTTGACAAAGGTGATGATCGAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR GCA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGTTACAATCCACTTCATaGAGTCAGCAAAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLLQSTS*SQQKDF
Trigger: AAAGTCTTTTTGCTGACTGCATGAAGTGGATTGTAA...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR GCA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACTTTGTCAAATGCAGCTaGTTGGATTTTCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: SESAVACLSSSIADSSDNFVKCS*LDFLLI
Trigger: GATCAACAGAAAATCCAAGCAGCTGCATTTGACAAA...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp ACTTGTTTCCTTTGCTGCGAGCTACTGAATATAGGCTTTTTGCCAAGTCTTCGAACATTTTCATCAGACTaGCTTGAAGAGACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: TCFLCCELLNIGFLPSLRTFSSD*LEETED
Trigger: ATCTTCAGTCTCTTCAAGGCAGTCTGATGAAAATGT...TCGAAGACTTGGCAAAAAGCCTATATTCAGTAGCTCGCAGCAAAGGAAACAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGAGCAAACTGGACACTaGCTCGTGGAATATTTTCTC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLEQTGH*LVEYFL
Trigger: GAGAAAATATTCCACGAGGCAGTGTCCAGTTTGCTC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp CTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATGAGCAAACTGGACACTaGCTCGTGGAATATTTTCTC +
Preference number: 4 (lower is better)
Translates to: LLFRNTVLVVIITHIMKHEQTGH*LVEYFL
Trigger: GAGAAAATATTCCACGAGGCAGTGTCCAGTTTGCTC...ATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGATACATGCGGGTTTGTaGCAGTGTGTCACAATCATC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLIHAGL*QCVTII
Trigger: GATGATTGTGACACACTGGCACAAACCCGCATGTAT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTTCAAAATTGCCTGTaGTACTGGCTCACTACATCC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLQNCL*YWLTTS
Trigger: GGATGTAGTGAGCCAGTACCACAGGCAATTTTGAAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGAGCTTTGAAATATTTTaGCATTCTAACGCCAACTTC +
Preference number: 4 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVSFEIF*HSNANF
Trigger: GAAGTTGGCGTTAGAATGCCAAAATATTTCAAAGCT...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCAGTTTCTGGAGTTTCATaGCTCTCTGGAGATTCTGAT +
Preference number: 4 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSVSGVS*LSGDSD
Trigger: ATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAAC...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCACAAATGGAGTTTCTaGAGTTTCATGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLHKWSF*SFMALW
Trigger: CCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCCAGTGACCCACAAATaGAGTTTCTGGAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLPVTHK*SFWSFM
Trigger: CATGAAACTCCAGAAACTCCATTTGTGGGTCACTGG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCATAGTCTTCAGATCTaGGCTTTATGTCATCGGAGG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLHSLQI*ALCHRR
Trigger: CCTCCGATGACATAAAGCCCAGATCTGAAGACTATG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp CTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATCATAGTCTTCAGATCTaGGCTTTATGTCATCGGAGG +
Preference number: 4 (lower is better)
Translates to: LLFRNTVLVVIITHIMKHHSLQI*ALCHRR
Trigger: CCTCCGATGACATAAAGCCCAGATCTGAAGACTATG...ATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp CTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACTCATAGTCTTCAGATCTaGGCTTTATGTCATCGGAGG +
Preference number: 4 (lower is better)
Translates to: LFRNTVLVVIITHIMKHTHSLQI*ALCHRR
Trigger: CCTCCGATGACATAAAGCCCAGATCTGAAGACTATG...AGTATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGCTTCCAAGAAAATCATaGCACAGCATAGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMLPRKS*HSIVPH
Trigger: ATGTGGCACTATGCTGTGCCATGATTTTCTTGGAAG...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGTCGAGACCAAATTTCTaGCCTTTTCCTAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMSRPNF*PFPRDF
Trigger: GAAATCCCTAGGAAAAGGCCAGAAATTTGGTCTCGA...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGCTGTCTGCTTCTACTaGATAGGACGTCTATTGTGT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLAVCFY*IGRLLC
Trigger: ACACAATAGACGTCCTATCCAGTAGAAGCAGACAGC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGTTTTTGAAGGCCGATaGTCATACATGCGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLVFEGR*SYMRVC
Trigger: ACAAACCCGCATGTATGACCATCGGCCTTCAAAAAC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
3UTR CAA 72 bp TCTGCTCAAATGCTTCTATTACATCCATCTCATATATaGGAGACAGGGTTTTTGAAGGCCGATGGTCATACA +
Preference number: 4 (lower is better)
Translates to: SAQMLLLHPSHI*ETGFLKADGHT
Trigger: TGTATGACCATCGGCCTTCAAAAACCCTGTCTCCAATATATGAGATGGATGTAATAGAAGCATTTGAGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AGAGAGATAACTCCAACACTCTTTCTTGTTATTTCCCCTCCAAGATTTGATTTTCTGCTTTGTGTGCTTTaGACAAAGTACAACCCACAG +
Preference number: 4 (lower is better)
Translates to: REITPTLFLVISPPRFDFLLCVL*TKYNPQ
Trigger: CTGTGGGTTGTACTTTGTTCAAAGCACACAAAGCAG...AAAATCAAATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAGTTATCTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR TCA 90 bp CTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACATGGCTTATACCTTaGAGAGTAACGTACTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLFRNTVLVVIITHIMKHTWLIP*RVTYSW
Trigger: CCAAGAGTACGTTACTCTTCAAGGTATAAGCCATGT...ATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGACATGGCTTATACCTTaGAGAGTAACGTACTCTTGG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLTWLIP*RVTYSW
Trigger: CCAAGAGTACGTTACTCTTCAAGGTATAAGCCATGT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR TCA 90 bp CTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATTCCACTCCAACTGAATaGGCAATAATCAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: LLFRNTVLVVIITHIMKHSTPTE*AIIRHS
Trigger: AGAATGCCTGATTATTGCTCATTCAGTTGGAGTGGA...ATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTCCACTCCAACTGAATaGGCAATAATCAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSTPTE*AIIRHS
Trigger: AGAATGCCTGATTATTGCTCATTCAGTTGGAGTGGA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGACTTTCCACTCCAACTaGATGAGCAATAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLTFHSN*MSNNQA
Trigger: TGCCTGATTATTGCTCATTCAGTTGGAGTGGAAAGT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR TCA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTGCTTGGATTTTCTGTTaGTCATCTGTGCTCATCAGC +
Preference number: 4 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFAWIFC*SSVLIS
Trigger: GCTGATGAGCACAGATGATCAACAGAAAATCCAAGC...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGATTTCTATTGGTACTTaGCGAATGTCCAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLISIGT*RMSRCS
Trigger: GGAGCATCTGGACATTCGTCAAGTACCAATAGAAAT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTTTGGGAGGAAGGCTaGGTTTTTGATATAACCTGT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLWEEG*VFDITC
Trigger: ACAGGTTATATCAAAAACTCAGCCTTCCTCCCAAAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCATTAATGAGAGGTTTGTaGGGCTTCTGTTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSLMRGL*GFCSET
Trigger: TGTTTCTGAACAGAAGCCTCACAAACCTCTCATTAA...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTCACTCCCAACAGAATaGCAACATATGTTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSLPTE*QHMLAA
Trigger: TGCAGCTAACATATGTTGTCATTCTGTTGGGAGTGA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTGGTTCTCCCTATCTaGTATCAAATGGATTTGCCC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLVLPI*YQMDLP
Trigger: GGGCAAATCCATTTGATATCAGATAGGGAGAACCAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTTGGAAGATACATCTaGGTCTGCTGTAGCATGTTT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLGRYI*VCCSMF
Trigger: AAACATGCTACAGCAGACTCAGATGTATCTTCCAAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCCTTGGAAGATACATCTaGGTCTGCTGTAGCATGTTT +
Preference number: 4 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFLGRYI*VCCSMF
Trigger: AAACATGCTACAGCAGACTCAGATGTATCTTCCAAG...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGTACTCAAATTCCAGTaGCCCACAAATGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLVLKFQ*PTNGVS
Trigger: AGAAACTCCATTTGTGGGTCACTGGAATTTGAGTAC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGATCTTCACTTTCTCGTaGGAATCTGGAATAGCAGGT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLIFTFS*ESGIAG
Trigger: ACCTGCTATTCCAGATTCTCACGAGAAAGTGAAGAT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTCAGGAGGTATATTTaGAAAGCTTCTCTCAGACCA +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLRRYI*KASLRP
Trigger: TGGTCTGAGAGAAGCTTTGCAAATATACCTCCTGAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGACTTGTTTCCTTTGCTaGGAGCTACTGAATATAGGC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLTCFLC*ELLNIG
Trigger: GCCTATATTCAGTAGCTCGCAGCAAAGGAAACAAGT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
CDS-3UTR GCA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCACATGTTTTCCAACCGTaGCTTATCACCATTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSHVFQP*LITIFC
Trigger: ACAGAAAATGGTGATAAGGCACGGTTGGAAAACATG...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp CTTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTGGTCCAACATGTTTTCCAACCGTaGCTTATCACCATTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LDHFSLRCLFLCSCIVVQHVFQP*LITIFC
Trigger: ACAGAAAATGGTGATAAGGCACGGTTGGAAAACATG...TTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCAGATATCAAATGGATTTaGCCTGCACTTGTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSDIKWI*PALVES
Trigger: AGACTCAACAAGTGCAGGGCAAATCCATTTGATATC...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACTATCCAAGAATTTGCTaGGTTGCTGAATGTCATTTT +
Preference number: 4 (lower is better)
Translates to: SESAVACLSSSIADSSDNYPRIC*VAECHF
Trigger: AAAATGACATTCAGCAACGCAGCAAATTCTTGGATA...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCATGTTCAGAGAGCAGTTaGTTTAGTAGTGTCCAATCT +
Preference number: 4 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSCSESS*FSSVQS
Trigger: AGATTGGACACTACTAAAGCAACTGCTCTCTGAACA...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCATCTTTTCTCCCTACTTaGTTCTCCCTATCTGATATC +
Preference number: 4 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSSFLPT*FSLSDI
Trigger: GATATCAGATAGGGAGAACCAAGTAGGGAGAAAAGA...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGTCCCGAAAAACACTTaGAAGATACATCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLVPKNT*KIHLSL
Trigger: CAGACTCAGATGTATCTTCCAAGTGTTTTTCGGGAC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGTTTCTGGAGTTTCATaGCTCTCTGGAGATTCTGAT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLVSGVS*LSGDSD
Trigger: ATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAAC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTCCAGTGACCCACAAATaGAGTTTCTGGAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFPVTHK*SFWSFM
Trigger: CATGAAACTCCAGAAACTCCATTTGTGGGTCACTGG...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTTCCAAGAAAATCATaGCACAGCATAGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLPRKS*HSIVPH
Trigger: ATGTGGCACTATGCTGTGCCATGATTTTCTTGGAAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCAATTCTTCAGGAGTACTaGTATCACTGCTACTTCTTC +
Preference number: 4 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSILQEY*YHCYFF
Trigger: GAAGAAGTAGCAGTGATACCAGTACTCCTGAAGAAT...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTCGAGACCAAATTTCTaGCCTTTTCCTAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSRPNF*PFPRDF
Trigger: GAAATCCCTAGGAAAAGGCCAGAAATTTGGTCTCGA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp GACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTAGTAGAGTCGAGACCAAATTTCTaGCCTTTTCCTAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: DECPDAPNPSDFIFLLVESRPNF*PFPRDF
Trigger: GAAATCCCTAGGAAAAGGCCAGAAATTTGGTCTCGA...CTCTACTAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTTCTCGTGAGAATCTaGAATAGCAGGTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLFLVRI*NSRSFH
Trigger: ATGGAAGGACCTGCTATTCCAGATTCTCACGAGAAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp AACTTTAAAGACCTCCTTATTCTTCCGATTTTGCTGAACAGGAAACTACTGATCTTTCTCGTGAGAATCTaGAATAGCAGGTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: NFKDLLILPILLNRKLLIFLVRI*NSRSFH
Trigger: ATGGAAGGACCTGCTATTCCAGATTCTCACGAGAAA...GATCAGTAGTTTCCTGTTCAGCAAAATCGGAAGAATAAGGAGGTCTTTAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTCAGTAGTTGTAGAATaGCTCTCTTTCACTGGACCT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSVVVE*LSFTGP
Trigger: AGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
3UTR CAA 72 bp ATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATaGTGGTCCAACTTTGCCACATTTTCATCAGACTGC +
Preference number: 4 (lower is better)
Translates to: IFLLGACFSVVV*WSNFATFSSDC
Trigger: GCAGTCTGATGAAAATGTGGCAAAGTTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCACACTTTGGAAAACTaGTGTCAAGTTGCTTTTGTG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLHTLEN*CQVAFV
Trigger: CACAAAAGCAACTTGACATCAGTTTTCCAAAGTGTG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCATCATCTCTGTCACTaGTATCCTCTGGAATTTCAT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLHHLCH*YPLEFH
Trigger: ATGAAATTCCAGAGGATATCAGTGACAGAGATGATG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR TCA 90 bp AGAGAGATAACTCCAACACTCTTTCTTGTTATTTCCCCTCCAAGATTTGATTTTATTTCTATTGGTACTTaGCGAATGTCCAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: REITPTLFLVISPPRFDFISIGT*RMSRCS
Trigger: GGAGCATCTGGACATTCGTCAAGTACCAATAGAAAT...AAAATCAAATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAGTTATCTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp CTTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTGGTCCAATCCATTGGTAACTCTTaGAACAGGTCGAGATTTTAT +
Preference number: 4 (lower is better)
Translates to: LDHFSLRCLFLCSCIVVQSIGNS*NRSRFY
Trigger: ATAAAATCTCGACCTGTTTCAAGAGTTACCAATGGA...TTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTACATCCTTTGCCACTaGCTTTCTTTAGTACACTGT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLYILCH*LSLVHC
Trigger: ACAGTGTACTAAAGAAAGTCAGTGGCAAAGGATGTA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTAATGAGAGGTTTGTaGGGCTTCTGTTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLMRGL*GFCSET
Trigger: TGTTTCTGAACAGAAGCCTCACAAACCTCTCATTAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTTCACTCCCAACAGAATaGCAACATATGTTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFSLPTE*QHMLAA
Trigger: TGCAGCTAACATATGTTGTCATTCTGTTGGGAGTGA...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAACATAGCAGATTCATCTaGCAACTTACTAGGAATTGT +
Preference number: 4 (lower is better)
Translates to: PYLISNGFALHLLSLNHKHSRFI*QLTRNC
Trigger: ACAATTCCTAGTAAGTTGTCAGATGAATCTGCTATG...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGCTCTCTGGAGATTCTaGTGTTTCCATATTTTTAGG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLALWRF*CFHIFR
Trigger: CCTAAAAATATGGAAACATCAGAATCTCCAGAGAGC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAATTCTGTTTCATCTGCTaGAGAAGATACCTGATCTAT +
Preference number: 4 (lower is better)
Translates to: PYLISNGFALHLLSLNHKFCFIC*RRYLIY
Trigger: ATAGATCAGGTATCTTCTTCAGCAGATGAAACAGAA...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAATTTGCTGCGTTGCTaGATGTCATTTTCCACATTG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLNLLRC*MSFSTL
Trigger: CAATGTGGAAAATGACATTCAGCAACGCAGCAAATT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGATATGTGTTATACCCTaGGGTTTTGAGCTATCTCGT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLICVIP*GFELSR
Trigger: ACGAGATAGCTCAAAACCTCAGGGTATAACACATAT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGATCACCTTTGTCAAATaGAGCTGCTTGGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLITFVK*SCLDFL
Trigger: CAGAAAATCCAAGCAGCTGCATTTGACAAAGGTGAT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp CTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACTATCACCTTTGTCAAATaGAGCTGCTTGGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: LFRNTVLVVIITHIMKHTITFVK*SCLDFL
Trigger: CAGAAAATCCAAGCAGCTGCATTTGACAAAGGTGAT...AGTATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp GACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTAGTAGAGATCACCTTTGTCAAATaGAGCTGCTTGGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: DECPDAPNPSDFIFLLVEITFVK*SCLDFL
Trigger: CAGAAAATCCAAGCAGCTGCATTTGACAAAGGTGAT...CTCTACTAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCATGTTTTCCAACCGTaGCTTATCACCATTTTCTGT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLHVFQP*LITIFC
Trigger: ACAGAAAATGGTGATAAGGCACGGTTGGAAAACATG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGATATCAAATGGATTTaGCCTGCACTTGTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLDIKWI*PALVES
Trigger: AGACTCAACAAGTGCAGGGCAAATCCATTTGATATC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCCTAGAGTGAACTATTaGAGATCGAGACCAAATTTC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLPRVNY*RSRPNF
Trigger: GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCACTATCCAAGAATTTaGTGCGTTGCTGAATGTCAT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLHYPRI*CVAECH
Trigger: ATGACATTCAGCAACGCAGCAAATTCTTGGATAGTG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTGTTCAGAGAGCAGTTaGTTTAGTAGTGTCCAATCT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLCSESS*FSSVQS
Trigger: AGATTGGACACTACTAAAGCAACTGCTCTCTGAACA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp CTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACACAATGTAAAAATTaGACGTTGGTACCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LLFRNTVLVVIITHIMKHTQCKN*TLVPSE
Trigger: CTCTGAGGGTACCAACGTGCAATTTTTACATTGTGT...ATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR CCA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCATCAAAGGCTTTGCTTTaGCTTGCACATTTAAGTTTC +
Preference number: 4 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSSKALL*LAHLSF
Trigger: GAAACTTAAATGTGCAAGCCAAAGCAAAGCCTTTGA...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp CTTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTGGTCCAATTTAGTAAGATTAGATaGGGTACTCTTTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LDHFSLRCLFLCSCIVVQFSKIR*GTLCPL
Trigger: CAGAGGACAAAGAGTACCCCATCTAATCTTACTAAA...TTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTCTTTTCTCCCTACTTaGTTCTCCCTATCTGATATC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSFLPT*FSLSDI
Trigger: GATATCAGATAGGGAGAACCAAGTAGGGAGAAAAGA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTGTCCCGAAAAACACTTaGAAGATACATCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFVPKNT*KIHLSL
Trigger: CAGACTCAGATGTATCTTCCAAGTGTTTTTCGGGAC...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGATTCTTCAGGAGTACTaGTATCACTGCTACTTCTTC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLILQEY*YHCYFF
Trigger: GAAGAAGTAGCAGTGATACCAGTACTCCTGAAGAAT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTGTAGAGCTGTTCTTTaGTATGTCAGAATTGGGTTC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLCRAVL*YVRIGF
Trigger: GAACCCAATTCTGACATACCAAAGAACAGCTCTACA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAAGTAAAAATTGCACGTTaGTACCCTCAGAGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: PYLISNGFALHLLSLNHKVKIAR*YPQSFV
Trigger: TACAAAACTCTGAGGGTACCAACGTGCAATTTTTAC...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674371.1
3UTR CAA 72 bp CCAAGATTTGATTTTTATATCACCAGAGTCAGAAACTaGTTTCCTTTGCTGCGAGCTACTGAATATAGGCTT +
Preference number: 4 (lower is better)
Translates to: PRFDFYITRVRN*FPLLRATEYRL
Trigger: AAGCCTATATTCAGTAGCTCGCAGCAAAGGAAACAAGTTTCTGACTCTGGTGATATAAAAATCAAATCTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635934.1
3UTR CAA 72 bp TTCTCTTTGATGAAGATCCAAGTGACATGGTCTTTCTaGAGATTTTACATCACTATCCAAGAATTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: FSLMKIQVTWSF*RFYITIQEFAA
Trigger: CGCAGCAAATTCTTGGATAGTGATGTAAAATCTCAAGAAAGACCATGTCACTTGGATCTTCATCAAAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp GTACTTGACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTACATCATCTCTGTCACTaGTATCCTCTGGAATTTCAT +
Preference number: 4 (lower is better)
Translates to: VLDECPDAPNPSDFIFLLHHLCH*YPLEFH
Trigger: ATGAAATTCCAGAGGATATCAGTGACAGAGATGATG...TAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTCAAGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTCCCCTCCAAGATTTaGTTTTTATATCACCAGAGT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLFPSKI*FLYHQS
Trigger: ACTCTGGTGATATAAAAATCAAATCTTGGAGGGGAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTCCATTGGTAACTCTTaGAACAGGTCGAGATTTTAT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSIGNS*NRSRFY
Trigger: ATAAAATCTCGACCTGTTTCAAGAGTTACCAATGGA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AGAGAGATAACTCCAACACTCTTTCTTGTTATTTCCCCTCCAAGATTTGATTTTTACATCCTTTGCCACTaGCTTTCTTTAGTACACTGT +
Preference number: 4 (lower is better)
Translates to: REITPTLFLVISPPRFDFYILCH*LSLVHC
Trigger: ACAGTGTACTAAAGAAAGTCAGTGGCAAAGGATGTA...AAAATCAAATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAGTTATCTCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTCTCCTTGGGATCCTTaGGTTTTAGTAAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSPWDP*VLVRLD
Trigger: ATCTAATCTTACTAAAACTCAAGGATCCCAAGGAGA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp CTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATTCTCCTTGGGATCCTTaGGTTTTAGTAAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: LLFRNTVLVVIITHIMKHSPWDP*VLVRLD
Trigger: ATCTAATCTTACTAAAACTCAAGGATCCCAAGGAGA...ATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AGAGAGATAACTCCAACACTCTTTCTTGTTATTTCCCCTCCAAGATTTGATTTTTTAATGAGAGGTTTGTaGGGCTTCTGTTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: REITPTLFLVISPPRFDFLMRGL*GFCSET
Trigger: TGTTTCTGAACAGAAGCCTCACAAACCTCTCATTAA...AAAATCAAATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAGTTATCTCTCT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCATAGCAGATTCATCTaGCAACTTACTAGGAATTGT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLHSRFI*QLTRNC
Trigger: ACAATTCCTAGTAAGTTGTCAGATGAATCTGCTATG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTCTGTTTCATCTGCTaGAGAAGATACCTGATCTAT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLFCFIC*RRYLIY
Trigger: ATAGATCAGGTATCTTCTTCAGCAGATGAAACAGAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTGTAACATGTGTTTCTaGTTCCACTTTCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLCNMCF*FHFLLK
Trigger: TTTGAGCAGAAAGTGGAATCAGAAACACATGTTACA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR TCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGCTAAAAGTAGTGTCTaGTTGATTAGATACTGTGCT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLAKSSV*LIRYCA
Trigger: AGCACAGTATCTAATCAATCAGACACTACTTTTAGC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTTGTCAAATGCAGCTaGTTGGATTTTCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLFVKCS*LDFLLI
Trigger: GATCAACAGAAAATCCAAGCAGCTGCATTTGACAAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AACTTTAAAGACCTCCTTATTCTTCCGATTTTGCTGAACAGGAAACTACTGATCTTTGTCAAATGCAGCTaGTTGGATTTTCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: NFKDLLILPILLNRKLLIFVKCS*LDFLLI
Trigger: GATCAACAGAAAATCCAAGCAGCTGCATTTGACAAA...GATCAGTAGTTTCCTGTTCAGCAAAATCGGAAGAATAAGGAGGTCTTTAAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGACATTTTCATCAGACTaGCTTGAAGAGACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLTFSSD*LEETED
Trigger: ATCTTCAGTCTCTTCAAGGCAGTCTGATGAAAATGT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCATTGCCACTATTTTTaGATTAACCTTAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLHCHYF*INLRQS
Trigger: GCTTTGCCTAAGGTTAATGCAAAAATAGTGGCAATG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGACAACATATGTTAGCTaGATCGCAATCATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLTTYVS*IAIICF
Trigger: GAAACAGATGATTGCGATGCAGCTAACATATGTTGT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGAGTACTGGTATCACTaGTACTTCTTCCAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLEYWYH*YFFQEN
Trigger: ATTTTCTTGGAAGAAGTAGCAGTGATACCAGTACTC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTACTATGTTACCCTATaGAGAGCAAAAAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLYYVTL*RAKSKG
Trigger: CCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp CTTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTGGTCCAATTTGTATATTGCACATaGAAAGGAAGATGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LDHFSLRCLFLCSCIVVQFVYCT*KGRCKQ
Trigger: TTGCTTGCATCTTCCTTTGCATGTGCAATATACAAA...TTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTCAAAGGCTTTGCTTTaGCTTGCACATTTAAGTTTC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSKALL*LAHLSF
Trigger: GAAACTTAAATGTGCAAGCCAAAGCAAAGCCTTTGA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTTAGTAAGATTAGATaGGGTACTCTTTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLFSKIR*GTLCPL
Trigger: CAGAGGACAAAGAGTACCCCATCTAATCTTACTAAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCTTTAGTAAGATTAGATaGGGTACTCTTTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFFSKIR*GTLCPL
Trigger: CAGAGGACAAAGAGTACCCCATCTAATCTTACTAAA...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTATCTGATATCAAATaGATTTGCCCTGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLSDIK*ICPALV
Trigger: AACAAGTGCAGGGCAAATCCATTTGATATCAGATAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp AGAGAGATAACTCCAACACTCTTTCTTGTTATTTCCCCTCCAAGATTTGATTTTTGTAGAGCTGTTCTTTaGTATGTCAGAATTGGGTTC +
Preference number: 4 (lower is better)
Translates to: REITPTLFLVISPPRFDFCRAVL*YVRIGF
Trigger: GAACCCAATTCTGACATACCAAAGAACAGCTCTACA...AAAATCAAATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAGTTATCTCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp AGAGAGATAACTCCAACACTCTTTCTTGTTATTTCCCCTCCAAGATTTGATTTTTCCATTGGTAACTCTTaGAACAGGTCGAGATTTTAT +
Preference number: 4 (lower is better)
Translates to: REITPTLFLVISPPRFDFSIGNS*NRSRFY
Trigger: ATAAAATCTCGACCTGTTTCAAGAGTTACCAATGGA...AAAATCAAATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAGTTATCTCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR TCA 90 bp GTACTTGACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTAGCTAAAAGTAGTGTCTaGTTGATTAGATACTGTGCT +
Preference number: 4 (lower is better)
Translates to: VLDECPDAPNPSDFIFLLAKSSV*LIRYCA
Trigger: AGCACAGTATCTAATCAATCAGACACTACTTTTAGC...TAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTCAAGTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTACAATCCACTTCATaGAGTCAGCAAAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLQSTS*SQQKDF
Trigger: AAAGTCTTTTTGCTGACTGCATGAAGTGGATTGTAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCAAAACCTTGCAAAATaGTTTACAATCCACTTCATG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLQNLAK*FTIHFM
Trigger: CATGAAGTGGATTGTAAAGCATTTTGCAAGGTTTTG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAAAGCTGTGTGTACTTaGTTGACCATTTTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLKAVCT*LTIFLL
Trigger: TAAGAGAAAAATGGTCAAGCAAGTACACACAGCTTT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp CTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACTAAAGCTGTGTGTACTTaGTTGACCATTTTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: LFRNTVLVVIITHIMKHTKAVCT*LTIFLL
Trigger: TAAGAGAAAAATGGTCAAGCAAGTACACACAGCTTT...AGTATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTACAACATATGTTAGCTaGATCGCAATCATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFTTYVS*IAIICF
Trigger: GAAACAGATGATTGCGATGCAGCTAACATATGTTGT...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTGAGTACTGGTATCACTaGTACTTCTTCCAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFEYWYH*YFFQEN
Trigger: ATTTTCTTGGAAGAAGTAGCAGTGATACCAGTACTC...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGATGTTCATGAGAAATaGCATCAAAAACATCAGAAG +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLDVHEK*HQKHQK
Trigger: CTTCTGATGTTTTTGATGGCATTTCTCATGAACATC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR GCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTATCCAAGAATTTGCTaGGTTGCTGAATGTCATTTT +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLYPRIC*VAECHF
Trigger: AAAATGACATTCAGCAACGCAGCAAATTCTTGGATA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAGCTTTGAAATATTTTaGCATTCTAACGCCAACTTC +
Preference number: 4 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSFEIF*HSNANF
Trigger: GAAGTTGGCGTTAGAATGCCAAAATATTTCAAAGCT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CCA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCAGCTTTGAAATATTTTaGCATTCTAACGCCAACTTC +
Preference number: 4 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFSFEIF*HSNANF
Trigger: GAAGTTGGCGTTAGAATGCCAAAATATTTCAAAGCT...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
3UTR CAA 72 bp CTCCAACACTCTTTCTTGTTATTTCCCCTCCAAGATTaGATTTTTATATCACCAGAGTCAGAAACTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LQHSFLLFPLQD*IFISPESETCF
Trigger: GAAACAAGTTTCTGACTCTGGTGATATAAAAATCAAATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR GCA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTCAAAACCTTGCAAAATaGTTTACAATCCACTTCATG +
Preference number: 4 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFQNLAK*FTIHFM
Trigger: CATGAAGTGGATTGTAAAGCATTTTGCAAGGTTTTG...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR GCA 90 bp GTACTTGACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTATATCCAAGAATTTGCTaGGTTGCTGAATGTCATTTT +
Preference number: 4 (lower is better)
Translates to: VLDECPDAPNPSDFIFLLYPRIC*VAECHF
Trigger: AAAATGACATTCAGCAACGCAGCAAATTCTTGGATA...TAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTCAAGTAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS GCA 90 bp CTCACAGAGGTACGACGCCCTGGAGGCCCAGTACTTGGCCTCACTTaGCCCGCCCAGGAGGAAGAAGGGGGCGTTTCCGACCGAACGCTC +
Preference number: 5 (lower is better)
Translates to: LTEVRRPGGPVLGLT*PAQEEEGGVSDRTL
Trigger: GAGCGTTCGGTCGGAAACGCCCCCTTCTTCCTCCTGGGCGGGGCAAGTGAGGCCAAGTACTGGGCCTCCAGGGCGTCGTACCTCTGTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
CDS CCA 90 bp CGAGCCATGTCTCACAGAGGTACGACGCCCTGGAGGCCCAGTACTTaGCCTCACTTGCCCCGCCCAGGAGGAAGAAGGGGGCGTTTCCGA +
Preference number: 5 (lower is better)
Translates to: RAMSHRGTTPWRPST*PHLPRPGGRRGRFR
Trigger: TCGGAAACGCCCCCTTCTTCCTCCTGGGCGGGGCAAGTGAGGCCAAGTACTGGGCCTCCAGGGCGTCGTACCTCTGTGAGACATGGCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
CDS CCA 90 bp CTGCCTTCCCCACAGCGAGCCATGTCTCACAGAGGTACGACGCCCTaGAGGCCCAGTACTTGGCCTCACTTGCCCCGCCCAGGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: LPSPQRAMSHRGTTP*RPSTWPHLPRPGGR
Trigger: TCTTCCTCCTGGGCGGGGCAAGTGAGGCCAAGTACTGGGCCTCCAGGGCGTCGTACCTCTGTGAGACATGGCTCGCTGTGGGGAAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
CDS TCA 90 bp CGAACGCTCGGCTCCTACCCAAATCCGCCCCCTAGGGTAAAAGGTTaGCGCCTCTCGTCGGTTTGTAGACAGTCTCCCAGAGAAGCCGGA +
Preference number: 5 (lower is better)
Translates to: RTLGSYPNPPPRVKG*RLSSVCRQSPREAG
Trigger: TCCGGCTTCTCTGGGAGACTGTCTACAAACCGACGAGAGGCGTCAACCTTTTACCCTAGGGGGCGGATTTGGGTAGGAGCCGAGCGTTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
CDS CCA 90 bp CACCCTGCGCTGGAATGGTATCCTGTCCAGGGTTGGTTCCAACCTTaGGTCCTTAGCTGCAGACAGGCTCCAGCCACCCACAATAAGGAC +
Preference number: 5 (lower is better)
Translates to: HPALEWYPVQGWFQP*VLSCRQAPATHNKD
Trigger: GTCCTTATTGTGGGTGGCTGGAGCCTGTCTGCAGCTAAGGACCCAAGGTTGGAACCAACCCTGGACAGGATACCATTCCAGCGCAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642070.1
CDS-3UTR CAA 90 bp CTTTTTCTTGATCGTTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGAACCGAGCCGGCTCTaGACCCAGGAAGAGCGTGCG +
Preference number: 5 (lower is better)
Translates to: LFLDRLMAFVGQACRMTGEPSRL*TQEERA
Trigger: CGCACGCTCTTCCTGGGTCAAGAGCCGGCTCGGTTC...TCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAACGATCAAGAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGCTGGAGGCCCAGTACTaGGCCTCACTTGCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLLEAQY*ASLAPP
Trigger: GGGCGGGGCAAGTGAGGCCAAGTACTGGGCCTCCAG...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp GGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTTATTTTTCCAGTTCCAGAATaGTCCACTCGCCTTGAGGCG +
Preference number: 5 (lower is better)
Translates to: GFCGSGLQDDWSASASLIFPVPE*STRLEA
Trigger: CGCCTCAAGGCGAGTGGACAATTCTGGAACTGGAAA...AATAAGTGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTGGAGGCCCAGTACTaGGCCTCACTTGCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLEAQY*ASLAPP
Trigger: GGGCGGGGCAAGTGAGGCCAAGTACTGGGCCTCCAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CAA 90 bp GGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTTATTACCAGAGTCAGAAACTaGTTTCCTTTGCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GFCGSGLQDDWSASASLITRVRN*FPLLSL
Trigger: GAGGCTGAGCAAAGGAAACAAGTTTCTGACTCTGGT...AATAAGTGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR CAA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGCGCAGAGCCTGGATCTaGCACGTAAAACCCATTTCC +
Preference number: 5 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVRRAWI*HVKPIS
Trigger: GGAAATGGGTTTTACGTGCAAGATCCAGGCTCTGCG...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTCTTTTCTTCAAAATaGCCTGTGGTACTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: FNGFCGSGLQDDWSASASLFSSK*PVVLAH
Trigger: GTGAGCCAGTACCACAGGCAATTTTGAAGAAAAGAG...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp GGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTTATTTTCTCTGTAGTTGTATaGTGGTCCAACTTTGCCACA +
Preference number: 5 (lower is better)
Translates to: GFCGSGLQDDWSASASLIFSVVV*WSNFAT
Trigger: TGTGGCAAAGTTGGACCACAATACAACTACAGAGAA...AATAAGTGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCAAGATACCTCTGTCATTaGACCCATCATCATCCTGAG +
Preference number: 5 (lower is better)
Translates to: FNGFCGSGLQDDWSASASRYLCH*THHHPE
Trigger: CTCAGGATGATGATGGGTCAAATGACAGAGGTATCT...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAGTACTTGGCCTCACTaGCCCCGCCCAGGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSTWPH*PRPGGR
Trigger: TCTTCCTCCTGGGCGGGGCAAGTGAGGCCAAGTACT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CAA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCAACTGCTTTGTGTGCTTaGAACAAAGTACAACCCACA +
Preference number: 5 (lower is better)
Translates to: FNGFCGSGLQDDWSASASTALCA*NKVQPT
Trigger: TGTGGGTTGTACTTTGTTCAAAGCACACAAAGCAGT...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGAAGAGTAACGTACTCTaGGGAGCTTTCAGCCCAACA +
Preference number: 5 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQKSNVL*GAFSPT
Trigger: TGTTGGGCTGAAAGCTCCCAAGAGTACGTTACTCTT...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp CTTTTTCTTGATCGTTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGACTTCGATCATCACCTTaGTCAAATGCAGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: LFLDRLMAFVGQACRMTGLRSSP*SNAAAW
Trigger: CCAAGCAGCTGCATTTGACAAAGGTGATGATCGAAG...TCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAACGATCAAGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp TCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCCTTCGATCATCACCTTaGTCAAATGCAGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: SLMQNTSTQIPVTHKWSFLRSSP*SNAAAW
Trigger: CCAAGCAGCTGCATTTGACAAAGGTGATGATCGAAG...GAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AGATTCAGGACTCTCTCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCTCTTTTCTTCAAAATaGCCTGTGGTACTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: RFRTLSLMQNTSTQIPVTLFSSK*PVVLAH
Trigger: GTGAGCCAGTACCACAGGCAATTTTGAAGAAAAGAG...GGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp GGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCACTTATTCTCTCCTTGGGATCCTaGAGTTTTAGTAAGATTAGA +
Preference number: 5 (lower is better)
Translates to: GFCGSGLQDDWSASASLILSLGS*SFSKIR
Trigger: TCTAATCTTACTAAAACTCAAGGATCCCAAGGAGAG...AATAAGTGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGTGCTCTCTTCATCTTTaGTATCCCTCGGCACCATGT +
Preference number: 5 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQCSLHL*YPSAPC
Trigger: ACATGGTGCCGAGGGATACAAAAGATGAAGAGAGCA...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR CAA 90 bp AGAGAGATAACTCCAACACTCTTTCTTGTTATTTCCCCTCCAAGATTTGATTTTAGTACTTGGCCTCACTaGCCCCGCCCAGGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: REITPTLFLVISPPRFDFSTWPH*PRPGGR
Trigger: TCTTCCTCCTGGGCGGGGCAAGTGAGGCCAAGTACT...AAAATCAAATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAGTTATCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAAACACGGCCCCTTCCTTaGCAACCCCTTACTGCAAAC +
Preference number: 5 (lower is better)
Translates to: PYLISNGFALHLLSLNHKTRPLP*QPLTAN
Trigger: GTTTGCAGTAAGGGGTTGCAAAGGAAGGGGCCGTGT...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp AGATTCAGGACTCTCTCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCTGCTTGGATTTTCTGTaGATCATCTGTGCTCATCAG +
Preference number: 5 (lower is better)
Translates to: RFRTLSLMQNTSTQIPVTCLDFL*IICAHQ
Trigger: CTGATGAGCACAGATGATCAACAGAAAATCCAAGCA...GGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp CTTTTTCTTGATCGTTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGGCTCACTACATCCTTaGCCACTGACTTTCTTTAGT +
Preference number: 5 (lower is better)
Translates to: LFLDRLMAFVGQACRMTGGSLHP*PLTFFS
Trigger: ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCC...TCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAACGATCAAGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS CCA 90 bp TGTGCTCTCTTCATCTTTTGTATCCCTCGGCACCATGTCACATATTaGATACTGCGAGCTACTGAATATAGGCTTTTTGCCAAGTCTTCG +
Preference number: 5 (lower is better)
Translates to: CALFIFCIPRHHVTY*ILRATEYRLFAKSS
Trigger: CGAAGACTTGGCAAAAAGCCTATATTCAGTAGCTCGCAGTATCCAATATGTGACATGGTGCCGAGGGATACAAAAGATGAAGAGAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGACACGGCCCCTTCCTTaGCAACCCCTTACTGCAAAC +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLTRPLP*QPLTAN
Trigger: GTTTGCAGTAAGGGGTTGCAAAGGAAGGGGCCGTGT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CAA 90 bp CTTTTTCTTGATCGTTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTCAAATGCAGCTGCTaGGATTTTCTGTTGATCATC +
Preference number: 5 (lower is better)
Translates to: LFLDRLMAFVGQACRMTGVKCSC*DFLLII
Trigger: GATGATCAACAGAAAATCCAAGCAGCTGCATTTGAC...TCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAACGATCAAGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AAAATTGCCTGTGGTACTGGCTCACTACATCCTTTGCCACTGACTTTCTTTAGTCTGCTGCTGCTGCTGTaGCTGATCTTTCTACAACTT +
Preference number: 5 (lower is better)
Translates to: KIACGTGSLHPLPLTFFSLLLLL*LIFLQL
Trigger: AAGTTGTAGAAAGATCAGCAACAGCAGCAGCAGCAG...ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCCAGTACCACAGGCAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp TTTAATGGCTTTTGTGGGTCAGGCCTGCAGGATGACTGGAGTGCTTCTGCATCATTCAAAGGCTTTGCTTaGGCTTGCACATTTAAGTTT +
Preference number: 5 (lower is better)
Translates to: FNGFCGSGLQDDWSASASFKGFA*ACTFKF
Trigger: AAACTTAAATGTGCAAGCCAAAGCAAAGCCTTTGAA...TGATGCAGAAGCACTCCAGTCATCCTGCAGGCCTGACCCACAAAAGCCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGGGCTCACTACATCCTTaGCCACTGACTTTCTTTAGT +
Preference number: 5 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVGSLHP*PLTFFS
Trigger: ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCC...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGGCTGCAGTACATCCATaGCTAGTTCCTCTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVAAVHP*LVPLFF
Trigger: GAAGAAAAGAGGAACTAGCAATGGATGTACTGCAGC...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAATTTCCAGTTCCAGAATaGTCCACTCGCCTTGAGGCG +
Preference number: 5 (lower is better)
Translates to: PYLISNGFALHLLSLNHKFPVPE*STRLEA
Trigger: CGCCTCAAGGCGAGTGGACAATTCTGGAACTGGAAA...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AGATTCAGGACTCTCTCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCTCAGTCAGCCACTATaGCATATTTTAAATGTGGGT +
Preference number: 5 (lower is better)
Translates to: RFRTLSLMQNTSTQIPVTLSQPL*HILNVG
Trigger: ACCCACATTTAAAATATGCAATAGTGGCTGACTGAG...GGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGAGAGAGTCCTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCGCAGAGCCTGGATCTaGCACGTAAAACCCATTTCC +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLRRAWI*HVKPIS
Trigger: GGAAATGGGTTTTACGTGCAAGATCCAGGCTCTGCG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CAA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGTCAAATGCAGCTGCTaGGATTTTCTGTTGATCATC +
Preference number: 5 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLVKCSC*DFLLII
Trigger: GATGATCAACAGAAAATCCAAGCAGCTGCATTTGAC...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCAGAAACTTGTTTCCTTaGCTGCGAGCTACTGAATAT +
Preference number: 5 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSRNLFP*LRATEY
Trigger: ATATTCAGTAGCTCGCAGCAAAGGAAACAAGTTTCT...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp ATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTCTCCAACACTCTTTCTaGTTATTTCCCCTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: MQNTSTQIPVTHKWSFWSLQHSF*LFPLQD
Trigger: ATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAG...ACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCCTTTCTTCAAAGGCTTaGCTTTGGCTTGCACATTTA +
Preference number: 5 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSLSSKA*LWLAHL
Trigger: TAAATGTGCAAGCCAAAGCAAAGCCTTTGAAGAAAG...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp CCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGGAGATTCTGATGTTTCCTATTGTGGTCCAACTTaGCCACATTTTCATCAGACT +
Preference number: 5 (lower is better)
Translates to: PTNGVSGVSWLSGDSDVSYCGPT*PHFHQT
Trigger: AGTCTGATGAAAATGTGGCAAAGTTGGACCACAATA...GGAAACATCAGAATCTCCAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGGAAACACTGTCCTTGTaGTTATTATCACGCACATCA +
Preference number: 5 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQETLSL*LLSRTS
Trigger: TGATGTGCGTGATAATAACAACAAGGACAGTGTTTC...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp GTCTTCGATCATCACCTTTGTCAAATGCAGCTGCTTGGATTTTCTGTTGATCATAATTGTCCACTCGCCTaGAGGCGAACAATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: VFDHHLCQMQLLGFSVDHNCPLA*RRTIFR
Trigger: TCTGAAGATTGTTCGCCTCAAGGCGAGTGGACAATT...ATGATCAACAGAAAATCCAAGCAGCTGCATTTGACAAAGGTGATGATCGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTTCCAGTTCCAGAATaGTCCACTCGCCTTGAGGCG +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLFPVPE*STRLEA
Trigger: CGCCTCAAGGCGAGTGGACAATTCTGGAACTGGAAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGAGGCCAACATTAGTTTaGTCTGGAATGTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLRPTLV*SGMSRV
Trigger: AACTCTGGACATTCCAGACAAAACTAATGTTGGCCT...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp AAAATTGCCTGTGGTACTGGCTCACTACATCCTTTGCCACTGACTTTCTTTAGTAGAAACTTGTTTCCTTaGCTCAGCCTCCTAAAGTGC +
Preference number: 5 (lower is better)
Translates to: KIACGTGSLHPLPLTFFSRNLFP*LSLLKC
Trigger: GCACTTTAGGAGGCTGAGCAAAGGAAACAAGTTTCT...ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCCAGTACCACAGGCAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR CAA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGTTTAGGGTAAGTCCGTaGCAAAAGGCAGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLFRVSP*QKAGIN
Trigger: ATTTATCCCTGCCTTTTGCAACGGACTTACCCTAAA...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR CAA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGTGTAAAAATTGCACGTaGGTACCCTCAGAGTTTTGT +
Preference number: 5 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQCKNCT*VPSEFC
Trigger: ACAAAACTCTGAGGGTACCAACGTGCAATTTTTACA...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS GCA 90 bp TCTTCATCTTTTGTATCCCTCGGCACCATGTCACATATTGGATACTaGGAGCTACTGAATATAGGCTTTTTGCCAAGTCTTCGATCATCA +
Preference number: 5 (lower is better)
Translates to: SSSFVSLGTMSHIGY*ELLNIGFLPSLRSS
Trigger: TGATGATCGAAGACTTGGCAAAAAGCCTATATTCAGTAGCTCGCAGTATCCAATATGTGACATGGTGCCGAGGGATACAAAAGATGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR CAA 90 bp ACTTGTTTCCTTTGCTGCGAGCTACTGAATATAGGCTTTTTGCCAAGTCTTCGATGCAATACATTTTTCTaGAAGCTGAGACGCCATGGT +
Preference number: 5 (lower is better)
Translates to: TCFLCCELLNIGFLPSLRCNTFF*KLRRHG
Trigger: ACCATGGCGTCTCAGCTTCAAGAAAAATGTATTGCA...TCGAAGACTTGGCAAAAAGCCTATATTCAGTAGCTCGCAGCAAAGGAAACAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp GACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGCTTTCTTCAAAGGCTTaGCTTTGGCTTGCACATTTA +
Preference number: 5 (lower is better)
Translates to: DTASWNIFSFPRVNYCRSLSSKA*LWLAHL
Trigger: TAAATGTGCAAGCCAAAGCAAAGCCTTTGAAGAAAG...CGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AAAATTGCCTGTGGTACTGGCTCACTACATCCTTTGCCACTGACTTTCTTTAGTAAGATTTTACTGAGTTaGGTGACTCTCCTTGGGATC +
Preference number: 5 (lower is better)
Translates to: KIACGTGSLHPLPLTFFSKILLS*VTLLGI
Trigger: GATCCCAAGGAGAGTCACCAAACTCAGTAAAATCTT...ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCCAGTACCACAGGCAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp TCGCTGATGCAGAACACCAGTACTCAAATTCCAGTGACCCACAAATGGAGTTTCTTTCATCAGACTGCCTaGAAGAGACTGAAGATTTTA +
Preference number: 5 (lower is better)
Translates to: SLMQNTSTQIPVTHKWSFFHQTA*KRLKIL
Trigger: TAAAATCTTCAGTCTCTTCAAGGCAGTCTGATGAAA...GAAACTCCATTTGTGGGTCACTGGAATTTGAGTACTGGTGTTCTGCATCAGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp GACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGTATTGTGGTCCAACTTaGCCACATTTTCATCAGACT +
Preference number: 5 (lower is better)
Translates to: DTASWNIFSFPRVNYCRSYCGPT*PHFHQT
Trigger: AGTCTGATGAAAATGTGGCAAAGTTGGACCACAATA...CGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp TACTCAAATTCCAGTGACCCACAAATGGAGTTTCTGGAGTTTCATGGCTCTCTGCATCCATCTCATATATaGGAGACAGGGTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: YSNSSDPQMEFLEFHGSLHPSHI*ETGFLK
Trigger: CTTCAAAAACCCTGTCTCCAATATATGAGATGGATG...CAGAGAGCCATGAAACTCCAGAAACTCCATTTGTGGGTCACTGGAATTTGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AGCTTTTTCAGTAGTTGTAGAATGGCTCTCTTTCACTGGACCTTCCTGAGGCAGGTGTCCAATCTTGTTTaGCAAAATGTTGGTCATCTT +
Preference number: 5 (lower is better)
Translates to: SFFSSCRMALFHWTFLRQVSNLV*QNVGHL
Trigger: AAGATGACCAACATTTTGCAAAACAAGATTGGACAC...CTGCCTCAGGAAGGTCCAGTGAAAGAGAGCCATTCTACAACTACTGAAAAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp ATGCTCGCTGAGGAATCAAGTGGAGATGTTAGTTCACTCCATCTGTTCAAAGTGCTTATTCTTCCGATTTaGCTGAACAGGAAACTACTG +
Preference number: 5 (lower is better)
Translates to: MLAEESSGDVSSLHLFKVLILPI*LNRKLL
Trigger: CAGTAGTTTCCTGTTCAGCAAAATCGGAAGAATAAG...CACTTTGAACAGATGGAGTGAACTAACATCTCCACTTGATTCCTCAGCGAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAAGAGTAACGTACTCTaGGGAGCTTTCAGCCCAACA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLKSNVL*GAFSPT
Trigger: TGTTGGGCTGAAAGCTCCCAAGAGTACGTTACTCTT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CAA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAATCTCAGGAGGTATATTaGCAAAGCTTCTCTCAGACC +
Preference number: 5 (lower is better)
Translates to: PYLISNGFALHLLSLNHKSQEVY*QSFSQT
Trigger: GGTCTGAGAGAAGCTTTGCAAATATACCTCCTGAGA...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTTCGATCATCACCTTaGTCAAATGCAGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLRSSP*SNAAAW
Trigger: CCAAGCAGCTGCATTTGACAAAGGTGATGATCGAAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACCTGAATATAGGCTTTTaGCCAAGTCTTCGATCATCA +
Preference number: 5 (lower is better)
Translates to: SESAVACLSSSIADSSDNLNIGF*PSLRSS
Trigger: TGATGATCGAAGACTTGGCAAAAAGCCTATATTCAG...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGACCAGAGTCAGAAACTaGTTTCCTTTGCTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLTRVRN*FPLLRA
Trigger: AGCTCGCAGCAAAGGAAACAAGTTTCTGACTCTGGT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
CDS-3UTR CAA 90 bp AAAATTGCCTGTGGTACTGGCTCACTACATCCTTTGCCACTGACTTTCTTTAGTTATTTCTATTGGTACTaGACGAATGTCCAGATGCTC +
Preference number: 5 (lower is better)
Translates to: KIACGTGSLHPLPLTFFSYFYWY*TNVQML
Trigger: GAGCATCTGGACATTCGTCAAGTACCAATAGAAATA...ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCCAGTACCACAGGCAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTGCTGCTGCTGCTGTaGCTGATCTTTCTACAACTT +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLLLLL*LIFLQL
Trigger: AAGTTGTAGAAAGATCAGCAACAGCAGCAGCAGCAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACCAAAGCTGTGTGTACTaGCTTGACCATTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: SESAVACLSSSIADSSDNQSCVY*LDHFSL
Trigger: AAGAGAAAAATGGTCAAGCAAGTACACACAGCTTTG...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACAGAATTGGGTTCTCTTaGATGAAGATCCAAGTGACA +
Preference number: 5 (lower is better)
Translates to: SESAVACLSSSIADSSDNRIGFS*MKIQVT
Trigger: TGTCACTTGGATCTTCATCAAAGAGAACCCAATTCT...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTGGAGACAGGGTTTTaGAAGGCCGATGGTCATACA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLETGF*KADGHT
Trigger: TGTATGACCATCGGCCTTCAAAAACCCTGTCTCCAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAATTGTCCACTCGCCTaGAGGCGAACAATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLNCPLA*RRTIFR
Trigger: TCTGAAGATTGTTCGCCTCAAGGCGAGTGGACAATT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AACTTTAAAGACCTCCTTATTCTTCCGATTTTGCTGAACAGGAAACTACTGATCAATTGTCCACTCGCCTaGAGGCGAACAATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: NFKDLLILPILLNRKLLINCPLA*RRTIFR
Trigger: TCTGAAGATTGTTCGCCTCAAGGCGAGTGGACAATT...GATCAGTAGTTTCCTGTTCAGCAAAATCGGAAGAATAAGGAGGTCTTTAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR CAA 90 bp GACACTGCCTCGTGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGGCTTATTTGTATATaGCACATGCAAAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: DTASWNIFSFPRVNYCRSRLICI*HMQRKM
Trigger: CATCTTCCTTTGCATGTGCAATATACAAATAAGCCT...CGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCACGAGGCAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTCTCAGGAGGTATATTaGCAAAGCTTCTCTCAGACC +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSQEVY*QSFSQT
Trigger: GGTCTGAGAGAAGCTTTGCAAATATACCTCCTGAGA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CAA 90 bp GTACTTGACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTAACCAGAGTCAGAAACTaGTTTCCTTTGCTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: VLDECPDAPNPSDFIFLLTRVRN*FPLLRA
Trigger: AGCTCGCAGCAAAGGAAACAAGTTTCTGACTCTGGT...TAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTCAAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp GTACTTGACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTACTGCTGCTGCTGCTGTaGCTGATCTTTCTACAACTT +
Preference number: 5 (lower is better)
Translates to: VLDECPDAPNPSDFIFLLLLLLL*LIFLQL
Trigger: AAGTTGTAGAAAGATCAGCAACAGCAGCAGCAGCAG...TAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTCAAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGGCTCACTACATCCTTaGCCACTGACTTTCTTTAGT +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLGSLHP*PLTFFS
Trigger: ACTAAAGAAAGTCAGTGGCAAAGGATGTAGTGAGCC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTCTTTTCTTCAAAATaGCCTGTGGTACTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLFSSK*PVVLAH
Trigger: GTGAGCCAGTACCACAGGCAATTTTGAAGAAAAGAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGCTGCAGTACATCCATaGCTAGTTCCTCTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLAAVHP*LVPLFF
Trigger: GAAGAAAAGAGGAACTAGCAATGGATGTACTGCAGC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAGATACCTCTGTCATTaGACCCATCATCATCCTGAG +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLRYLCH*THHHPE
Trigger: CTCAGGATGATGATGGGTCAAATGACAGAGGTATCT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp CTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACTAGATACCTCTGTCATTaGACCCATCATCATCCTGAG +
Preference number: 5 (lower is better)
Translates to: LFRNTVLVVIITHIMKHTRYLCH*THHHPE
Trigger: CTCAGGATGATGATGGGTCAAATGACAGAGGTATCT...AGTATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp TCTGAGTCTGCTGTAGCATGTTTGTCTTCATCCATAGCAGATTCATCTGACAACGTGACATGGTCTTTCTaGAGATTTTACATCACTATC +
Preference number: 5 (lower is better)
Translates to: SESAVACLSSSIADSSDNVTWSF*RFYITI
Trigger: GATAGTGATGTAAAATCTCAAGAAAGACCATGTCAC...GTTGTCAGATGAATCTGCTATGGATGAAGACAAACATGCTACAGCAGACTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTTTGGAGACAGGGTTTTaGAAGGCCGATGGTCATACA +
Preference number: 5 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFLETGF*KADGHT
Trigger: TGTATGACCATCGGCCTTCAAAAACCCTGTCTCCAA...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AGAGAGATAACTCCAACACTCTTTCTTGTTATTTCCCCTCCAAGATTTGATTTTTTGGAGACAGGGTTTTaGAAGGCCGATGGTCATACA +
Preference number: 5 (lower is better)
Translates to: REITPTLFLVISPPRFDFLETGF*KADGHT
Trigger: TGTATGACCATCGGCCTTCAAAAACCCTGTCTCCAA...AAAATCAAATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAGTTATCTCTCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGACTGCTTTGTGTGCTTaGAACAAAGTACAACCCACA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLTALCA*NKVQPT
Trigger: TGTGGGTTGTACTTTGTTCAAAGCACACAAAGCAGT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CAA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAAGCTAAAAGGACTGCTTaGTGTGCTTTGAACAAAGTA +
Preference number: 5 (lower is better)
Translates to: PYLISNGFALHLLSLNHKAKRTA*CALNKV
Trigger: TACTTTGTTCAAAGCACACAAAGCAGTCCTTTTAGC...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAGAAGTCAGGAACTCTaGCTAAAAGGACTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLRSQEL*LKGLLC
Trigger: ACAAAGCAGTCCTTTTAGCAAGAGTTCCTGACTTCT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CAA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGTACATGGCTTATACCTaGAAGAGTAACGTACTCTTG +
Preference number: 5 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMYMAYT*KSNVLL
Trigger: CAAGAGTACGTTACTCTTCAAGGTATAAGCCATGTA...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTGCAATACATTTTTCTaGAAGCTGAGACGCCATGGT +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLCNTFF*KLRRHG
Trigger: ACCATGGCGTCTCAGCTTCAAGAAAAATGTATTGCA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTGCTTGGATTTTCTGTaGATCATCTGTGCTCATCAG +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLCLDFL*IICAHQ
Trigger: CTGATGAGCACAGATGATCAACAGAAAATCCAAGCA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGTCAAATGCAGCTGCTaGGATTTTCTGTTGATCATC +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLVKCSC*DFLLII
Trigger: GATGATCAACAGAAAATCCAAGCAGCTGCATTTGAC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCACTGAATATAGGCTTTTaGCCAAGTCTTCGATCATCA +
Preference number: 5 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSLNIGF*PSLRSS
Trigger: TGATGATCGAAGACTTGGCAAAAAGCCTATATTCAG...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTCCAACACTCTTTCTaGTTATTTCCCCTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLQHSF*LFPLQD
Trigger: ATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAATATTTCTATTGGTACTaGACGAATGTCCAGATGCTC +
Preference number: 5 (lower is better)
Translates to: PYLISNGFALHLLSLNHKYFYWY*TNVQML
Trigger: GAGCATCTGGACATTCGTCAAGTACCAATAGAAATA...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp GTACTTGACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTAGCTGCAGTACATCCATaGCTAGTTCCTCTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: VLDECPDAPNPSDFIFLLAAVHP*LVPLFF
Trigger: GAAGAAAAGAGGAACTAGCAATGGATGTACTGCAGC...TAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTCAAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAAGATTTTACTGAGTTaGGTGACTCTCCTTGGGATC +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLKILLS*VTLLGI
Trigger: GATCCCAAGGAGAGTCACCAAACTCAGTAAAATCTT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCAAGATTTTACTGAGTTaGGTGACTCTCCTTGGGATC +
Preference number: 5 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFKILLS*VTLLGI
Trigger: GATCCCAAGGAGAGTCACCAAACTCAGTAAAATCTT...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTCTCTGTAGTTGTATaGTGGTCCAACTTTGCCACA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLFSVVV*WSNFAT
Trigger: TGTGGCAAAGTTGGACCACAATACAACTACAGAGAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGCTGTGTGTACTTGCTaGACCATTTTTCTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLAVCTC*TIFLLG
Trigger: ACCTAAGAGAAAAATGGTCAAGCAAGTACACACAGC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGCAAAGCTGTGTGTACTaGCTTGACCATTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMQSCVY*LDHFSL
Trigger: AAGAGAAAAATGGTCAAGCAAGTACACACAGCTTTG...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGTCAGAAACACTGTCCTaGTTGTTATTATCACGCACA +
Preference number: 5 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMSETLS*LLLSRT
Trigger: TGTGCGTGATAATAACAACAAGGACAGTGTTTCTGA...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGGATTTGCCCTGCACTaGTTGAGTCTAAATCACAAA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLGFALH*LSLNHK
Trigger: TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp CTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACTGGATTTGCCCTGCACTaGTTGAGTCTAAATCACAAA +
Preference number: 5 (lower is better)
Translates to: LFRNTVLVVIITHIMKHTGFALH*LSLNHK
Trigger: TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCC...AGTATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTCTGCTGTAGCATGTTaGTCTTCATCCATAGCAGAT +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSAVAC*SSSIAD
Trigger: ATCTGCTATGGATGAAGACAAACATGCTACAGCAGA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp CTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATTCTGCTGTAGCATGTTaGTCTTCATCCATAGCAGAT +
Preference number: 5 (lower is better)
Translates to: LLFRNTVLVVIITHIMKHSAVAC*SSSIAD
Trigger: ATCTGCTATGGATGAAGACAAACATGCTACAGCAGA...ATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCAAGAATTTGCTGCGTaGCTGAATGTCATTTTCCAC +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLQEFAA*LNVIFH
Trigger: GTGGAAAATGACATTCAGCAACGCAGCAAATTCTTG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp TCAGAGAGCAGTTGCTTTAGTAGTGTCCAATCTTGTTTTGCAAAATGTTGGTCAAGAATTGGGTTCTCTTaGATGAAGATCCAAGTGACA +
Preference number: 5 (lower is better)
Translates to: SESSCFSSVQSCFAKCWSRIGFS*MKIQVT
Trigger: TGTCACTTGGATCTTCATCAAAGAGAACCCAATTCT...TGACCAACATTTTGCAAAACAAGATTGGACACTACTAAAGCAACTGCTCTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp CTTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTGGTCCAACATCCATCTCATATATaGGAGACAGGGTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: LDHFSLRCLFLCSCIVVQHPSHI*ETGFLK
Trigger: CTTCAAAAACCCTGTCTCCAATATATGAGATGGATG...TTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp CCCTATCTGATATCAAATGGATTTGCCCTGCACTTGTTGAGTCTAAATCACAAATTATACCCTGAGGTTTaGAGCTATCTCGTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: PYLISNGFALHLLSLNHKLYPEV*SYLVLK
Trigger: TTTTAGCACGAGATAGCTCAAAACCTCAGGGTATAA...TTTGTGATTTAGACTCAACAAGTGCAGGGCAAATCCATTTGATATCAGATAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGCTAAAAGGACTGCTTaGTGTGCTTTGAACAAAGTA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLAKRTA*CALNKV
Trigger: TACTTTGTTCAAAGCACACAAAGCAGTCCTTTTAGC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CAA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTAGAAGTCAGGAACTCTaGCTAAAAGGACTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFRSQEL*LKGLLC
Trigger: ACAAAGCAGTCCTTTTAGCAAGAGTTCCTGACTTCT...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTACATGGCTTATACCTaGAAGAGTAACGTACTCTTG +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLYMAYT*KSNVLL
Trigger: CAAGAGTACGTTACTCTTCAAGGTATAAGCCATGTA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CAA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCTCTCAGACCAAAACCTaGCAAAATGCTTTACAATCC +
Preference number: 5 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFSQTKT*QNALQS
Trigger: GGATTGTAAAGCATTTTGCAAGGTTTTGGTCTGAGA...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTCTCAGACCAAAACCTaGCAAAATGCTTTACAATCC +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSQTKT*QNALQS
Trigger: GGATTGTAAAGCATTTTGCAAGGTTTTGGTCTGAGA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCAATTGCTTTTAAAATaGTGTCCAACAGATCGGCTG +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLQLLLK*CPTDRL
Trigger: CAGCCGATCTGTTGGACACAATTTTAAAAGCAATTG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
CDS-3UTR CAA 90 bp CTTCTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATCAATTGCTTTTAAAATaGTGTCCAACAGATCGGCTG +
Preference number: 5 (lower is better)
Translates to: LLFRNTVLVVIITHIMKHQLLLK*CPTDRL
Trigger: CAGCCGATCTGTTGGACACAATTTTAAAAGCAATTG...ATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635934.1
CDS-3UTR CAA 90 bp GTACTTGACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTATGCTTGGATTTTCTGTaGATCATCTGTGCTCATCAG +
Preference number: 5 (lower is better)
Translates to: VLDECPDAPNPSDFIFLLCLDFL*IICAHQ
Trigger: CTGATGAGCACAGATGATCAACAGAAAATCCAAGCA...TAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTCAAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTGAATATAGGCTTTTaGCCAAGTCTTCGATCATCA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLNIGF*PSLRSS
Trigger: TGATGATCGAAGACTTGGCAAAAAGCCTATATTCAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAGAAACTTGTTTCCTTaGCTGCGAGCTACTGAATAT +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLRNLFP*LRATEY
Trigger: ATATTCAGTAGCTCGCAGCAAAGGAAACAAGTTTCT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
CDS-3UTR CAA 90 bp TGTTCTTTGGTATGTCAGAATTGGGTTCTCTTTGATGAAGATCCAAGTGACATGTTTCCCCTCCAAGATTaGATTTTTATATCACCAGAG +
Preference number: 5 (lower is better)
Translates to: CSLVCQNWVLFDEDPSDMFPLQD*IFISPE
Trigger: CTCTGGTGATATAAAAATCAAATCTTGGAGGGGAAA...CATGTCACTTGGATCTTCATCAAAGAGAACCCAATTCTGACATACCAAAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp GTACTTGACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTACTCCAACACTCTTTCTaGTTATTTCCCCTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: VLDECPDAPNPSDFIFLLLQHSF*LFPLQD
Trigger: ATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAG...TAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTCAAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTATTTCTATTGGTACTaGACGAATGTCCAGATGCTC +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLYFYWY*TNVQML
Trigger: GAGCATCTGGACATTCGTCAAGTACCAATAGAAATA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp CTTGACCATTTTTCTCTTAGGTGCTTGTTTCTCTGTAGTTGTATTGTGGTCCAATTCAAAGGCTTTGCTTaGGCTTGCACATTTAAGTTT +
Preference number: 5 (lower is better)
Translates to: LDHFSLRCLFLCSCIVVQFKGFA*ACTFKF
Trigger: AAACTTAAATGTGCAAGCCAAAGCAAAGCCTTTGAA...TTGGACCACAATACAACTACAGAGAAACAAGCACCTAAGAGAAAAATGGTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTTTCTTCAAAGGCTTaGCTTTGGCTTGCACATTTA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLSSKA*LWLAHL
Trigger: TAAATGTGCAAGCCAAAGCAAAGCCTTTGAAGAAAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCTCTCCTTGGGATCCTaGAGTTTTAGTAAGATTAGA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLSLGS*SFSKIR
Trigger: TCTAATCTTACTAAAACTCAAGGATCCCAAGGAGAG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTATTGTGGTCCAACTTaGCCACATTTTCATCAGACT +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLYCGPT*PHFHQT
Trigger: AGTCTGATGAAAATGTGGCAAAGTTGGACCACAATA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTTTCTCTGTAGTTGTATaGTGGTCCAACTTTGCCACA +
Preference number: 5 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFFSVVV*WSNFAT
Trigger: TGTGGCAAAGTTGGACCACAATACAACTACAGAGAA...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCAAAGCTGTGTGTACTaGCTTGACCATTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLQSCVY*LDHFSL
Trigger: AAGAGAAAAATGGTCAAGCAAGTACACACAGCTTTG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGAAACACTGTCCTTGTaGTTATTATCACGCACATCA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLETLSL*LLSRTS
Trigger: TGATGTGCGTGATAATAACAACAAGGACAGTGTTTC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTCAGAAACACTGTCCTaGTTGTTATTATCACGCACA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLSETLS*LLLSRT
Trigger: TGTGCGTGATAATAACAACAAGGACAGTGTTTCTGA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp CTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACTTCAGAAACACTGTCCTaGTTGTTATTATCACGCACA +
Preference number: 5 (lower is better)
Translates to: LFRNTVLVVIITHIMKHTSETLS*LLLSRT
Trigger: TGTGCGTGATAATAACAACAAGGACAGTGTTTCTGA...AGTATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTTCTGCTGTAGCATGTTaGTCTTCATCCATAGCAGAT +
Preference number: 5 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFSAVAC*SSSIAD
Trigger: ATCTGCTATGGATGAAGACAAACATGCTACAGCAGA...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AGAGAGATAACTCCAACACTCTTTCTTGTTATTTCCCCTCCAAGATTTGATTTTCAAGAATTTGCTGCGTaGCTGAATGTCATTTTCCAC +
Preference number: 5 (lower is better)
Translates to: REITPTLFLVISPPRFDFQEFAA*LNVIFH
Trigger: GTGGAAAATGACATTCAGCAACGCAGCAAATTCTTG...AAAATCAAATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAGTTATCTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp GTACTTGACGAATGTCCAGATGCTCCTAATCCATCAGATTTCATCTTTTTATTACAAGAATTTGCTGCGTaGCTGAATGTCATTTTCCAC +
Preference number: 5 (lower is better)
Translates to: VLDECPDAPNPSDFIFLLQEFAA*LNVIFH
Trigger: GTGGAAAATGACATTCAGCAACGCAGCAAATTCTTG...TAATAAAAAGATGAAATCTGATGGATTAGGAGCATCTGGACATTCGTCAAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGAGAATTGGGTTCTCTTaGATGAAGATCCAAGTGACA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLRIGFS*MKIQVT
Trigger: TGTCACTTGGATCTTCATCAAAGAGAACCCAATTCT...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGCATCCATCTCATATATaGGAGACAGGGTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLHPSHI*ETGFLK
Trigger: CTTCAAAAACCCTGTCTCCAATATATGAGATGGATG...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTATACCCTGAGGTTTaGAGCTATCTCGTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLLYPEV*SYLVLK
Trigger: TTTTAGCACGAGATAGCTCAAAACCTCAGGGTATAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCTTATACCCTGAGGTTTaGAGCTATCTCGTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFLYPEV*SYLVLK
Trigger: TTTTAGCACGAGATAGCTCAAAACCTCAGGGTATAA...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS TCA 90 bp AAATCATCATCTCTGTCACTGATATCCTCTGGAATTTCATGCTTCTaGAGAGAACAATCAGATGAGTTTTCACACTTTGGAAAACTGATG +
Preference number: 5 (lower is better)
Translates to: KSSSLSLISSGISCF*REQSDEFSHFGKLM
Trigger: CATCAGTTTTCCAAAGTGTGAAAACTCATCTGATTGTTCTCTTCAGAAGCATGAAATTCCAGAGGATATCAGTGACAGAGATGATGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
CDS TCA 90 bp AGAGATAACTCCAACACTCTTTCTTGTTATTTCCCCTCCAAGATTTaGTTTTTATATCACCAGAGTCAGAAACTTGTTTCCTTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: RDNSNTLSCYFPSKI*FLYHQSQKLVSFAQ
Trigger: CTGAGCAAAGGAAACAAGTTTCTGACTCTGGTGATATAAAAATCAAATCTTGGAGGGGAAATAACAAGAAAGAGTGTTGGAGTTATCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTTCCCCTCCAAGATTaGATTTTTATATCACCAGAG +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLFPLQD*IFISPE
Trigger: CTCTGGTGATATAAAAATCAAATCTTGGAGGGGAAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp CTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACTTTTCCCCTCCAAGATTaGATTTTTATATCACCAGAG +
Preference number: 5 (lower is better)
Translates to: LFRNTVLVVIITHIMKHTFPLQD*IFISPE
Trigger: CTCTGGTGATATAAAAATCAAATCTTGGAGGGGAAA...AGTATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTCAAAGGCTTTGCTTaGGCTTGCACATTTAAGTTT +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLFKGFA*ACTFKF
Trigger: AAACTTAAATGTGCAAGCCAAAGCAAAGCCTTTGAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp ACAACATATGTTAGCTGCATCGCAATCATCTGTTTCTTTGTGATTGGGAAATTTCTCTCCTTGGGATCCTaGAGTTTTAGTAAGATTAGA +
Preference number: 5 (lower is better)
Translates to: TTYVSCIAIICFFVIGKFLSLGS*SFSKIR
Trigger: TCTAATCTTACTAAAACTCAAGGATCCCAAGGAGAG...AAATTTCCCAATCACAAAGAAACAGATGATTGCGATGCAGCTAACATATGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGTTTCATCAGACTGCCTaGAAGAGACTGAAGATTTTA +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLFHQTA*KRLKIL
Trigger: TAAAATCTTCAGTCTCTTCAAGGCAGTCTGATGAAA...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp TGGAATATTTTCTCTTTCCCTAGAGTGAACTATTGCAGATCGAGACCAAATTTCTTTCATCAGACTGCCTaGAAGAGACTGAAGATTTTA +
Preference number: 5 (lower is better)
Translates to: WNIFSFPRVNYCRSRPNFFHQTA*KRLKIL
Trigger: TAAAATCTTCAGTCTCTTCAAGGCAGTCTGATGAAA...GAAATTTGGTCTCGATCTGCAATAGTTCACTCTAGGGAAAGAGAAAATATTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGTGACATGGTCTTTCTaGAGATTTTACATCACTATC +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLVTWSF*RFYITI
Trigger: GATAGTGATGTAAAATCTCAAGAAAGACCATGTCAC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp AATTACTATGTTACCCTATGCAGAGCAAAAAGTAAAGGGACTGATCTACTTCTGGTGTCCAATCTTGTTTaGCAAAATGTTGGTCATCTT +
Preference number: 5 (lower is better)
Translates to: NYYVTLCRAKSKGTDLLLVSNLV*QNVGHL
Trigger: AAGATGACCAACATTTTGCAAAACAAGATTGGACAC...CAGAAGTAGATCAGTCCCTTTACTTTTTGCTCTGCATAGGGTAACATAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370378.5
ENST00000635934.1
ENST00000636805.2
ENST00000637221.2
ENST00000674371.1
CDS-3UTR CAA 90 bp CTGTTCAGAAACACTGTCCTTGTTGTTATTATCACGCACATCATGAAACATACTGTGTCCAATCTTGTTTaGCAAAATGTTGGTCATCTT +
Preference number: 5 (lower is better)
Translates to: LFRNTVLVVIITHIMKHTVSNLV*QNVGHL
Trigger: AAGATGACCAACATTTTGCAAAACAAGATTGGACAC...AGTATGTTTCATGATGTGCGTGATAATAACAACAAGGACAGTGTTTCTGAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635934.1
ENST00000674371.1
CDS CCA 72 bp TCTCACAGAGGTACGACGCCCTGGAGGCCCAGTACTTaGCCTCACTTGCCCCGCCCAGGAGGAAGAAGGGGG +
Preference number: 6 (lower is better)
Translates to: SHRGTTPWRPST*PHLPRPGGRRG
Trigger: CCCCCTTCTTCCTCCTGGGCGGGGCAAGTGAGGCCAAGTACTGGGCCTCCAGGGCGTCGTACCTCTGTGAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
CDS CCA 72 bp CCACAGCGAGCCATGTCTCACAGAGGTACGACGCCCTaGAGGCCCAGTACTTGGCCTCACTTGCCCCGCCCA +
Preference number: 6 (lower is better)
Translates to: PQRAMSHRGTTP*RPSTWPHLPRP
Trigger: TGGGCGGGGCAAGTGAGGCCAAGTACTGGGCCTCCAGGGCGTCGTACCTCTGTGAGACATGGCTCGCTGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
CDS CAA 72 bp GTGGGGAGCCTCAGAATCCCAGAACCGAGCCGGCTCTaGACCCAGGAAGAGCGTGCGCAGGCGTACTCGCTC +
Preference number: 6 (lower is better)
Translates to: VGSLRIPEPSRL*TQEERAQAYSL
Trigger: GAGCGAGTACGCCTGCGCACGCTCTTCCTGGGTCAAGAGCCGGCTCGGTTCTGGGATTCTGAGGCTCCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370382.7
ENST00000635934.1
CDS CAA 90 bp TCTCACAGAGGTACGACGCCCTGGAGGCCCAGTACTTGGCCTCACTaGCCCCGCCCAGGAGGAAGAAGGGGGCGTTTCCGACCGAACGCT +
Preference number: 6 (lower is better)
Translates to: SHRGTTPWRPSTWPH*PRPGGRRGRFRPNA
Trigger: AGCGTTCGGTCGGAAACGCCCCCTTCTTCCTCCTGGGCGGGGCAAGTGAGGCCAAGTACTGGGCCTCCAGGGCGTCGTACCTCTGTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
CDS GCA 72 bp CCCAGAACCGAGCCGGCTCTTGACCCAGGAAGAGCGTaGGCAGGCGTACTCGCTCTGTTTACTTCTGCCGGC +
Preference number: 6 (lower is better)
Translates to: PRTEPALDPGRA*AGVLALFTSAG
Trigger: GCCGGCAGAAGTAAACAGAGCGAGTACGCCTGCGCACGCTCTTCCTGGGTCAAGAGCCGGCTCGGTTCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370382.7
ENST00000635934.1
CDS GCA 72 bp TCTTCCCTTAGAAGCCTGAGCAAATCCTGGCTGAGCTaGTCCGACACCGTCGCCTTCAGCCGGCGCCGCTCA +
Preference number: 6 (lower is better)
Translates to: SSLRSLSKSWLS*SDTVAFSRRRS
Trigger: TGAGCGGCGCCGGCTGAAGGCGACGGTGTCGGAGCAGCTCAGCCAGGATTTGCTCAGGCTTCTAAGGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
CDS CCA 72 bp GTTTGTAGACAGTCTCCCAGAGAAGCCGGACCGCGGTaGGGAGCCTCAGAATCCCAGAACCGAGCCGGCTCT +
Preference number: 6 (lower is better)
Translates to: VCRQSPREAGPR*GASESQNRAGS
Trigger: AGAGCCGGCTCGGTTCTGGGATTCTGAGGCTCCCCACCGCGGTCCGGCTTCTCTGGGAGACTGTCTACAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
CDS CCA 72 bp CTGGAATGGTATCCTGTCCAGGGTTGGTTCCAACCTTaGGTCCTTAGCTGCAGACAGGCTCCAGCCACCCAC +
Preference number: 6 (lower is better)
Translates to: LEWYPVQGWFQP*VLSCRQAPATH
Trigger: GTGGGTGGCTGGAGCCTGTCTGCAGCTAAGGACCCAAGGTTGGAACCAACCCTGGACAGGATACCATTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642070.1
CDS TCA 72 bp GGCTCCTACCCAAATCCGCCCCCTAGGGTAAAAGGTTaGCGCCTCTCGTCGGTTTGTAGACAGTCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: GSYPNPPPRVKG*RLSSVCRQSPR
Trigger: TCTGGGAGACTGTCTACAAACCGACGAGAGGCGTCAACCTTTTACCCTAGGGGGCGGATTTGGGTAGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
CDS CAA 72 bp TTCTACATGGCTTATACCTTGAAGAGTAACGTACTCTaGGGAGCTTTCAGCCCAACAGCCACTCAGCATTGC +
Preference number: 6 (lower is better)
Translates to: FYMAYTLKSNVL*GAFSPTATQHC
Trigger: GCAATGCTGAGTGGCTGTTGGGCTGAAAGCTCCCAAGAGTACGTTACTCTTCAAGGTATAAGCCATGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
ENST00000642070.1
CDS CAA 90 bp ACCATGTCACATATTGGATACTGCGAGCTACTGAATATAGGCTTTTaGCCAAGTCTTCGATCATCACCTTTGTCAAATGCAGCTGCTTGG +
Preference number: 6 (lower is better)
Translates to: TMSHIGYCELLNIGF*PSLRSSPLSNAAAW
Trigger: CCAAGCAGCTGCATTTGACAAAGGTGATGATCGAAGACTTGGCAAAAAGCCTATATTCAGTAGCTCGCAGTATCCAATATGTGACATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS TCA 72 bp TTTTTCCTTTGGAAGCTGTATGAGATTGTAGAGGTCTaGGGCAGAGCCTGTGCTCTCTTCATCTTTTGTATC +
Preference number: 6 (lower is better)
Translates to: FFLWKLYEIVEV*GRACALFIFCI
Trigger: GATACAAAAGATGAAGAGAGCACAGGCTCTGCCTCAGACCTCTACAATCTCATACAGCTTCCAAAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS GCA 72 bp TTTGTATCCCTCGGCACCATGTCACATATTGGATACTaGGAGCTACTGAATATAGGCTTTTTGCCAAGTCTT +
Preference number: 6 (lower is better)
Translates to: FVSLGTMSHIGY*ELLNIGFLPSL
Trigger: AAGACTTGGCAAAAAGCCTATATTCAGTAGCTCGCAGTATCCAATATGTGACATGGTGCCGAGGGATACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS CCA 72 bp TTCATCTTTTGTATCCCTCGGCACCATGTCACATATTaGATACTGCGAGCTACTGAATATAGGCTTTTTGCC +
Preference number: 6 (lower is better)
Translates to: FIFCIPRHHVTY*ILRATEYRLFA
Trigger: GGCAAAAAGCCTATATTCAGTAGCTCGCAGTATCCAATATGTGACATGGTGCCGAGGGATACAAAAGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS CAA 72 bp CATATTGGATACTGCGAGCTACTGAATATAGGCTTTTaGCCAAGTCTTCGATCATCACCTTTGTCAAATGCA +
Preference number: 6 (lower is better)
Translates to: HIGYCELLNIGF*PSLRSSPLSNA
Trigger: TGCATTTGACAAAGGTGATGATCGAAGACTTGGCAAAAAGCCTATATTCAGTAGCTCGCAGTATCCAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674371.1
CDS TCA 72 bp CTCTGGAATTTCATGCTTCTGAAGAGAACAATCAGATaGGTTTTCACACTTTGGAAAACTGATGTCAAGTTG +
Preference number: 6 (lower is better)
Translates to: LWNFMLLKRTIR*VFTLWKTDVKL
Trigger: CAACTTGACATCAGTTTTCCAAAGTGTGAAAACTCATCTGATTGTTCTCTTCAGAAGCATGAAATTCCAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
CDS TCA 72 bp TCTAAAGCTTCAACATTCTCCACAGCAATAGGCTCCTaGTTTGTTAAACTATTTGATGTCTGTCCAATAGTA +
Preference number: 6 (lower is better)
Translates to: SKASTFSTAIGS*FVKLFDVCPIV
Trigger: TACTATTGGACAGACATCAAATAGTTTAACAAATCAGGAGCCTATTGCTGTGGAGAATGTTGAAGCTTTAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
CDS GCA 72 bp TTGTCTGGAATGTCCAGAGTTCCTCCATATATAAAATaGATCATAACATTCAGTTCTACATGGCTTATACCT +
Preference number: 6 (lower is better)
Translates to: LSGMSRVPPYIK*IITFSSTWLIP
Trigger: AGGTATAAGCCATGTAGAACTGAATGTTATGATGCATTTTATATATGGAGGAACTCTGGACATTCCAGACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342818.4
ENST00000370382.7
ENST00000635934.1
ENST00000636805.2
ENST00000642070.1