RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BTBD7 (Homo sapiens)

Ensembl gene IDs: ENSG00000011114

Ensembl transcript IDs: ENST00000298896.7, ENST00000334746.10, ENST00000355125.3, ENST00000553975.1, ENST00000554565.5, ENST00000554644.1, ENST00000555525.1, ENST00000613511.3, ENST00000613725.4, ENST00000620259.2, ENST00000625792.1, ENST00000625801.1, ENST00000627779.2, ENST00000628944.1

Found 1281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTGGTGGTGGCGGCAGCAGCAGCCACCGTCTGTCTGCCCAGTCCTaGAGTGCTGGTACAATCAGGCGGTGCAGCTTTCACACTCGGCAA +
Preference number: 1 (lower is better)
Translates to: GGGGGSSSHRLSAQS*SAGTIRRCSFHTRQ
Trigger: TTGCCGAGTGTGAAAGCTGCACCGCCTGATTGTACCAGCACTGCAGGACTGGGCAGACAGACGGTGGCTGCTGCTGCCGCCACCACCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CCA 90 bp TCTCAGATGCTGCTGCTGCTGCTGCTGTTGCTGTTGAGGTGGTGGTaGCGGCAGCAGCAGCCACCGTCTGTCTGCCCAGTCCTGCAGTGC +
Preference number: 1 (lower is better)
Translates to: SQMLLLLLLLLLRWW*RQQQPPSVCPVLQC
Trigger: GCACTGCAGGACTGGGCAGACAGACGGTGGCTGCTGCTGCCGCCACCACCACCTCAACAGCAACAGCAGCAGCAGCAGCAGCATCTGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CCA 90 bp GCTTCTCAGATGCTGCTGCTGCTGCTGCTGTTGCTGTTGAGGTGGTaGTGGCGGCAGCAGCAGCCACCGTCTGTCTGCCCAGTCCTGCAG +
Preference number: 1 (lower is better)
Translates to: ASQMLLLLLLLLLRW*WRQQQPPSVCPVLQ
Trigger: CTGCAGGACTGGGCAGACAGACGGTGGCTGCTGCTGCCGCCACCACCACCTCAACAGCAACAGCAGCAGCAGCAGCAGCATCTGAGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR GCA 90 bp ACAGCCGACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTaGACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAAC +
Preference number: 1 (lower is better)
Translates to: TADLQISVNSGSSGA*TTTSVTERTRTAAN
Trigger: GTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGTCGGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR GCA 90 bp GCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTaGCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACT +
Preference number: 1 (lower is better)
Translates to: AQQLTSQAAERVAAV*RGVQTHDMFPILET
Trigger: AGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR CCA 90 bp GCTGGTACAATCAGGCGGTGCAGCTTTCACACTCGGCAAGTAGACTaGGGGAGGGCCAGCTTTAGGAGCTGTTCTGGAGTGGAACAGCGA +
Preference number: 1 (lower is better)
Translates to: AGTIRRCSFHTRQVD*GRASFRSCSGVEQR
Trigger: TCGCTGTTCCACTCCAGAACAGCTCCTAAAGCTGGCCCTCCCCCAGTCTACTTGCCGAGTGTGAAAGCTGCACCGCCTGATTGTACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR GCA 90 bp GAGGTCGGCTTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTaGCTTCTGCATCGGCACCTTAATGCAGATGTACAAGGACTAAGC +
Preference number: 1 (lower is better)
Translates to: EVGFEPHCRWRVFPI*LLHRHLNADVQGLS
Trigger: GCTTAGTCCTTGTACATCTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAAGCCGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR CCA 90 bp CACGACAGATGCTGGGGAGGCCCTGGTCCTGCTTCAGAAACTGACTaGCTTAATTCTGTGTCTACAGCAAGCTCTGGAAGCCTCCTGTCC +
Preference number: 1 (lower is better)
Translates to: HDRCWGGPGPASETD*LNSVSTASSGSLLS
Trigger: GGACAGGAGGCTTCCAGAGCTTGCTGTAGACACAGAATTAAGCCAGTCAGTTTCTGAAGCAGGACCAGGGCCTCCCCAGCATCTGTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR TCA 90 bp CTGCAAGACCAAACTCTCTTAGCACTCGAATCTGAATTTCATAGCTaGCAGTGGCGCCTTCCCCGCAGTTCAGGGCATAGGCCCTCTGCA +
Preference number: 1 (lower is better)
Translates to: LQDQTLLALESEFHS*QWRLPRSSGHRPSA
Trigger: TGCAGAGGGCCTATGCCCTGAACTGCGGGGAAGGCGCCACTGTCAGCTATGAAATTCAGATTCGAGTGCTAAGAGAGTTTGGTCTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR TCA 90 bp GGCTTAATTCTGTGTCTACAGCAAGCTCTGGAAGCCTCCTGTCCTTaGGTGACAGTGTGGACACACCCACCGCGATGTCTGGCATCAGAT +
Preference number: 1 (lower is better)
Translates to: GLILCLQQALEASCP*VTVWTHPPRCLASD
Trigger: ATCTGATGCCAGACATCGCGGTGGGTGTGTCCACACTGTCACTCAAGGACAGGAGGCTTCCAGAGCTTGCTGTAGACACAGAATTAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR GCA 90 bp GCGATGTCTGGCATCAGATCATTCAGCACAGGTTGTGTTCGCACTTaGTTCTCAGATGCTGCTGCTGCTGCTGCTGTTGCTGTTGAGGTG +
Preference number: 1 (lower is better)
Translates to: AMSGIRSFSTGCVRT*FSDAAAAAAVAVEV
Trigger: CACCTCAACAGCAACAGCAGCAGCAGCAGCAGCATCTGAGAAGCAAGTGCGAACACAACCTGTGCTGAATGATCTGATGCCAGACATCGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CCA 90 bp TGGGCTAGACTGAATGCCCACAAGACCTACTGTGTGGCTGATGCGTaGGATCTCCCTTTGCTTCCTTCCCGTGTTGGAGCCCATTTTCTA +
Preference number: 1 (lower is better)
Translates to: WARLNAHKTYCVADA*DLPLLPSRVGAHFL
Trigger: TAGAAAATGGGCTCCAACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACAGTAGGTCTTGTGGGCATTCAGTCTAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR GCA 90 bp CAAATCTGTATTTCTCTGAGCTCCATGGCCCAGGGACTCACTGTCTaGCAGTCTTCTACCGGATCTCTCTTCGGGAGCTTCAGAGCTACA +
Preference number: 1 (lower is better)
Translates to: QICISLSSMAQGLTV*QSSTGSLFGSFRAT
Trigger: TGTAGCTCTGAAGCTCCCGAAGAGAGATCCGGTAGAAGACTGGCAGACAGTGAGTCCCTGGGCCATGGAGCTCAGAGAAATACAGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CCA 90 bp CTGGTTGCTGCTGATCTGCTGGTGGCTGATCATGTGACAACACTGTaGCACGGCATTATTGACCATGTAGAGCGTGTCTGGCACATTGGA +
Preference number: 1 (lower is better)
Translates to: LVAADLLVADHVTTL*HGIIDHVERVWHIG
Trigger: TCCAATGTGCCAGACACGCTCTACATGGTCAATAATGCCGTGCCACAGTGTTGTCACATGATCAGCCACCAGCAGATCAGCAGCAACCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR GCA 90 bp GTGAGTCACTGCGCCCGGTCTCCACTGCTTTCTAATTCCAAGGGATaGGATCTGTTTAGAGCCTCATCTGGTGACTCTAATCCTTATGAC +
Preference number: 1 (lower is better)
Translates to: VSHCARSPLLSNSKG*DLFRASSGDSNPYD
Trigger: GTCATAAGGATTAGAGTCACCAGATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAGACCGGGCGCAGTGACTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR GCA 90 bp GAGGTTGCTCTCAGAGGGCAGACTTTTTGTAGAGGAAGTCCGGCTTaGTTGGTGACCTCCTTCCTCTGCTTATTGAATCTTCCCTTTCCA +
Preference number: 1 (lower is better)
Translates to: EVALRGQTFCRGSPA*LVTSFLCLLNLPFP
Trigger: TGGAAAGGGAAGATTCAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGTCTGCCCTCTGAGAGCAACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CCA 90 bp GTGACAACACTGTGGCACGGCATTATTGACCATGTAGAGCGTGTCTaGCACATTGGACATTCTAACCATTCGCAAGCGCACAAGATCCGT +
Preference number: 1 (lower is better)
Translates to: VTTLWHGIIDHVERV*HIGHSNHSQAHKIR
Trigger: ACGGATCTTGTGCGCTTGCGAATGGTTAGAATGTCCAATGTGCCAGACACGCTCTACATGGTCAATAATGCCGTGCCACAGTGTTGTCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CCA 90 bp TTCCGAGAAGTGTGTGTATGTCTCTGTGGAATACACGACAGATGCTaGGGAGGCCCTGGTCCTGCTTCAGAAACTGACTGGCTTAATTCT +
Preference number: 1 (lower is better)
Translates to: FREVCVCLCGIHDRC*GGPGPASETDWLNS
Trigger: AGAATTAAGCCAGTCAGTTTCTGAAGCAGGACCAGGGCCTCCCCAGCATCTGTCGTGTATTCCACAGAGACATACACACACTTCTCGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR TCA 90 bp AAACAGTCCTTAGCTCACACATTGCCCTTCCAAGGGAGAGGATCCTaGAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGC +
Preference number: 1 (lower is better)
Translates to: KQSLAHTLPFQGRGS*KTPCAQWFSKCQTS
Trigger: GCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTCTCCCTTGGAAGGGCAATGTGTGAGCTAAGGACTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR GCA 90 bp TTTTTCCGAGAAGTGTGTGTATGTCTCTGTGGAATACACGACAGATaGTGGGGAGGCCCTGGTCCTGCTTCAGAAACTGACTGGCTTAAT +
Preference number: 1 (lower is better)
Translates to: FFREVCVCLCGIHDR*WGGPGPASETDWLN
Trigger: ATTAAGCCAGTCAGTTTCTGAAGCAGGACCAGGGCCTCCCCAGCATCTGTCGTGTATTCCACAGAGACATACACACACTTCTCGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CCA 90 bp GCAAGACAATTAAAGGCAGCAAGCAGTCAGTTCCGCCATCACAGCTaGAGAGTTGACGCTCAGAACCAGAAATTCTGTCAGTGTGACCTT +
Preference number: 1 (lower is better)
Translates to: ARQLKAASSQFRHHS*RVDAQNQKFCQCDL
Trigger: AAGGTCACACTGACAGAATTTCTGGTTCTGAGCGTCAACTCTCCAGCTGTGATGGCGGAACTGACTGCTTGCTGCCTTTAATTGTCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR TCA 90 bp GGTGCGTCTGCTGAGAGCAGGAGTAGAAGGTCTGCAAGCAGCATTTaGGAAGTCATAGAAATCCGGATATTCCTGTGGATTTTCTCTGGT +
Preference number: 1 (lower is better)
Translates to: GASAESRSRRSASSI*EVIEIRIFLWIFSG
Trigger: ACCAGAGAAAATCCACAGGAATATCCGGATTTCTATGACTTCTCAAATGCTGCTTGCAGACCTTCTACTCCTGCTCTCAGCAGACGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR TCA 90 bp TCTACCGGATCTCTCTTCGGGAGCTTCAGAGCTACATGCAGAAAGTaGAGGTCTGTTAGGAGTCAGCCCAAAAGTCAAGTCAGTTTCTAC +
Preference number: 1 (lower is better)
Translates to: STGSLFGSFRATCRK*RSVRSQPKSQVSFY
Trigger: GTAGAAACTGACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACTTTCTGCATGTAGCTCTGAAGCTCCCGAAGAGAGATCCGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR GCA 90 bp TCAACGACATCCAGGTGTATCGGCTCATTCTTTTGTCTGTGTAGATaGCCGTCAGGGGAAAGTGGATATTCTCTCCTAGCTTCTTCCTGT +
Preference number: 1 (lower is better)
Translates to: STTSRCIGSFFCLCR*PSGESGYSLLASSC
Trigger: ACAGGAAGAAGCTAGGAGAGAATATCCACTTTCCCCTGACGGGCATCTACACAGACAAAAGAATGAGCCGATACACCTGGATGTCGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR TCA 90 bp TCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTaGCTGCATCCACACTGTGGAAATGTAACAGCTTTAGCCTGGGCA +
Preference number: 1 (lower is better)
Translates to: SSGDSNPYDQNVQGF*LHPHCGNVTALAWA
Trigger: TGCCCAGGCTAAAGCTGTTACATTTCCACAGTGTGGATGCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR CCA 90 bp TCCCGTGTTGGAGCCCATTTTCTAGATCCTTCACTTCTTTGTTCTTaGTTTGCTTCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCT +
Preference number: 1 (lower is better)
Translates to: SRVGAHFLDPSLLCS*FASSFGGIHSQQLP
Trigger: AGGCAGCTGCTGGGAATGTATTCCACCAAATGACGAAGCAAACCAAGAACAAAGAAGTGAAGGATCTAGAAAATGGGCTCCAACACGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR CCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTaGAGGTTGCTCTCAGAGGGCAGACTTTTTGTAGAGGAAGTCCGG +
Preference number: 1 (lower is better)
Translates to: LHHKMGCFTSQAQTT*RLLSEGRLFVEEVR
Trigger: CCGGACTTCCTCTACAAAAAGTCTGCCCTCTGAGAGCAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CCA 90 bp TCCATGTCCAGGTCCCGTCTTTTTACACCTCTTTTGTTCACACTATaGGCAGTGCCACTCAGTAAGTTTGGCTCTCTATCTGCTATTCTT +
Preference number: 1 (lower is better)
Translates to: SMSRSRLFTPLLFTL*AVPLSKFGSLSAIL
Trigger: AAGAATAGCAGATAGAGAGCCAAACTTACTGAGTGGCACTGCCCATAGTGTGAACAAAAGAGGTGTAAAAAGACGGGACCTGGACATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CCA 90 bp TGTACTGTTTACGCGACATCTCCCAGGCTGTCTCATTGTCAAGAGTaGACTTTCATCCCCAAAACGTTCATCAGGAAAGAATTTGTGAGG +
Preference number: 1 (lower is better)
Translates to: CTVYATSPRLSHCQE*TFIPKTFIRKEFVR
Trigger: CCTCACAAATTCTTTCCTGATGAACGTTTTGGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGCGTAAACAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR GCA 90 bp ACTTTTTGTAGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTaGTTATTGAATCTTCCCTTTCCAAATCTGTATTTCTCTGAGCTC +
Preference number: 1 (lower is better)
Translates to: TFCRGSPACLVTSFL*LLNLPFPNLYFSEL
Trigger: GAGCTCAGAGAAATACAGATTTGGAAAGGGAAGATTCAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR TCA 90 bp GCAGAAACACACATCAAGGAACATGACGGCATTCACTTTTGTTTCTaGAGACAGACAGAGACTGGGCTTCAAAAGACACCGTCTTCTATT +
Preference number: 1 (lower is better)
Translates to: AETHIKEHDGIHFCF*RQTETGLQKTPSSI
Trigger: AATAGAAGACGGTGTCTTTTGAAGCCCAGTCTCTGTCTGTCTTCAGAAACAAAAGTGAATGCCGTCATGTTCCTTGATGTGTGTTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR TCA 90 bp CAAATTAGGTCTGTTGAGTCTTACTTGCAGTACCGGCGCAGTACATaGACATGTCAACATACATATGTGGCAGAAACACACATCAAGGAA +
Preference number: 1 (lower is better)
Translates to: QIRSVESYLQYRRST*TCQHTYVAETHIKE
Trigger: TTCCTTGATGTGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCAAGTAAGACTCAACAGACCTAATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR TCA 90 bp GAAGACAGACAGAGACTGGGCTTCAAAAGACACCGTCTTCTATTATaGGTCAAACTTCTTACAAATGAGAACAGAGGCCTATGCTTTTCT +
Preference number: 1 (lower is better)
Translates to: EDRQRLGFKRHRLLL*VKLLTNENRGLCFS
Trigger: AGAAAAGCATAGGCCTCTGTTCTCATTTGTAAGAAGTTTGACTCATAATAGAAGACGGTGTCTTTTGAAGCCCAGTCTCTGTCTGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR TCA 90 bp GTATTGTGGTATTCAGTTGTTGCTACTGAAAATCTCAATACCATCTaGTTCCTATTTCTTTGCATGGAACCTAATTTTTCTCCTCCCTGC +
Preference number: 1 (lower is better)
Translates to: VLWYSVVATENLNTI*FLFLCMEPNFSPPC
Trigger: GCAGGGAGGAGAAAAATTAGGTTCCATGCAAAGAAATAGGAATCAGATGGTATTGAGATTTTCAGTAGCAACAACTGAATACCACAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR-3UTR TCA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACTGCCGATCACAGGTGTaGGTCACTGCGCCCGGTCTC +
Preference number: 2 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHCRSQV*VTAPGL
Trigger: GAGACCGGGCGCAGTGACTCACACCTGTGATCGGCA...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACCTGCAGTTCGTCCCCTaGCATGGGCTGGACCGGTAC +
Preference number: 2 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHLQFVP*HGLDRY
Trigger: GTACCGGTCCAGCCCATGTCAGGGGACGAACTGCAG...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGGGCTTTGAGCCCCACTaGCGCTGGCGCGTGTTTCCA +
Preference number: 2 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGGFEPH*RWRVFP
Trigger: TGGAAACACGCGCCAGCGGCAGTGGGGCTCAAAGCC...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGGTGAAGGGTGCTGACTaGGAGGTCTTTGCTTCCAGC +
Preference number: 2 (lower is better)
Translates to: LGARERAPPPVSPSAPAQVKGAD*EVFASS
Trigger: GCTGGAAGCAAAGACCTCCCAGTCAGCACCCTTCAC...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGGCGCCCGGTCTCCACTaGTTTCTAATTCCAAGGGAT +
Preference number: 2 (lower is better)
Translates to: LGARERAPPPVSPSAPAQAPGLH*FLIPRD
Trigger: ATCCCTTGGAATTAGAAAGCAGTGGAGACCGGGCGC...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGAATGTGCAGGGATTCTaGCTGCATCCACACTGTGGA +
Preference number: 2 (lower is better)
Translates to: LGARERAPPPVSPSAPAQNVQGF*LHPHCG
Trigger: TCCACAGTGTGGATGCAGTCAGAATCCCTGCACATT...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGACTCGGCAAGTAGACTaGGGGAGGGCCAGCTTTAGG +
Preference number: 2 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGTRQVD*GRASFR
Trigger: CCTAAAGCTGGCCCTCCCCCAGTCTACTTGCCGAGT...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCACCAGTCCTGCAGTGCTaGTACAATCAGGCGGTGCAG +
Preference number: 2 (lower is better)
Translates to: ACTTTSVTERTRTAANQSPVLQC*YNQAVQ
Trigger: CTGCACCGCCTGATTGTACCAGCACTGCAGGACTGG...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCAGTTCGTCCCCTGACATaGGCTGGACCGGTACTAGCA +
Preference number: 2 (lower is better)
Translates to: ACTTTSVTERTRTAANQSVRPLT*AGPVLA
Trigger: TGCTAGTACCGGTCCAGCCCATGTCAGGGGACGAAC...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCCTGGTCTTGAACTCCTaGGCTTCAGTGATCTGCCCG +
Preference number: 2 (lower is better)
Translates to: LTLGARERAPPPVSPSAPLVLNS*ASVICP
Trigger: CGGGCAGATCACTGAAGCTCAGGAGTTCAAGACCAG...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCTCTGAATTTCATAGCTaGCAGTGGCGCCTTCCCCGC +
Preference number: 2 (lower is better)
Translates to: LTLGARERAPPPVSPSAPSEFHS*QWRLPR
Trigger: GCGGGGAAGGCGCCACTGTCAGCTATGAAATTCAGA...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGCGAGTGGCGGCAGTTTaGCGGGGCGTGCAGACACAC +
Preference number: 2 (lower is better)
Translates to: TCRLVLTLGARERAPPPVRVAAV*RGVQTH
Trigger: GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCG...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR CAA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTaGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: RTAANQSGSRTSGGS*PGRADTRHVSHLGD
Trigger: GTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTGCCGATCACAGGTGTaGGTCACTGCGCCCGGTCTC +
Preference number: 2 (lower is better)
Translates to: TCRLVLTLGARERAPPPVCRSQV*VTAPGL
Trigger: GAGACCGGGCGCAGTGACTCACACCTGTGATCGGCA...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCTTCCGCCATCACAGCTaGAGAGTTGACGCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: LTLGARERAPPPVSPSAPFRHHS*RVDAQN
Trigger: GTTCTGAGCGTCAACTCTCCAGCTGTGATGGCGGAA...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCATTCCGCCATCACAGCTaGAGAGTTGACGCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: ACTTTSVTERTRTAANQSFRHHS*RVDAQN
Trigger: GTTCTGAGCGTCAACTCTCCAGCTGTGATGGCGGAA...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp GAAAGTCTGACCGCTGGGGAGGTTGCTCAACGACATCCAGGTGTATCGGCTCATTGCCGATCACAGGTGTaGGTCACTGCGCCCGGTCTC +
Preference number: 2 (lower is better)
Translates to: ESLTAGEVAQRHPGVSAHCRSQV*VTAPGL
Trigger: GAGACCGGGCGCAGTGACTCACACCTGTGATCGGCA...ATGAGCCGATACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCTGGCATTGATGAACTaGTCTGTAAGTTGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: LGARERAPPPVSPSAPAQLALMN*SVSCWV
Trigger: AACCCAACAACTTACAGACCAGTTCATCAATGCCAG...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGAGAAATCAGCGTTGTTaGCACCCAATAGAAAACCTA +
Preference number: 2 (lower is better)
Translates to: LGARERAPPPVSPSAPAQRNQRC*HPIENL
Trigger: TAGGTTTTCTATTGGGTGTCAACAACGCTGATTTCT...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACGGGCACTGGAAGCGGTaGTTGTCCAAAGGCCTGATT +
Preference number: 2 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHGHWKR*LSKGLI
Trigger: AATCAGGCCTTTGGACAATCACCGCTTCCAGTGCCC...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp TGTGTGGCTGATGCGTGGGATCTCCCTTTGCTTCCTTCCCGTGTTGGAGCCCATTACATTCCCAGCAGCTaGCTGAGTGGGGAAGCAGGG +
Preference number: 2 (lower is better)
Translates to: CVADAWDLPLLPSRVGAHYIPSS*LSGEAG
Trigger: CCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTA...ATGGGCTCCAACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR-3UTR GCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCATGCAGGGATTCTGACTaGATCCACACTGTGGAAATG +
Preference number: 2 (lower is better)
Translates to: ACTTTSVTERTRTAANQSCRDSD*IHTVEM
Trigger: CATTTCCACAGTGTGGATGCAGTCAGAATCCCTGCA...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGACAGGTGTGAGTCACTaGGCCCGGTCTCCACTGCTT +
Preference number: 2 (lower is better)
Translates to: TCRLVLTLGARERAPPPVTGVSH*ARSPLL
Trigger: AAGCAGTGGAGACCGGGCGCAGTGACTCACACCTGT...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGCTTCAGGACCCTGACTaGACTCCCGCTGGAGGAATG +
Preference number: 2 (lower is better)
Translates to: TCRLVLTLGARERAPPPVLQDPD*TPAGGM
Trigger: CATTCCTCCAGCGGGAGTCCAGTCAGGGTCCTGAAG...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCAGTAACAGCTTTAGCCTaGGCACAGAAGGCTTTTCTC +
Preference number: 2 (lower is better)
Translates to: ACTTTSVTERTRTAANQSVTALA*AQKAFL
Trigger: GAGAAAAGCCTTCTGTGCCCAGGCTAAAGCTGTTAC...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCAAAACCAGCGTCCCAGTaGAGTTCAAGTAGGACATGT +
Preference number: 2 (lower is better)
Translates to: ACTTTSVTERTRTAANQSKPASQ*SSSRTC
Trigger: ACATGTCCTACTTGAACTCCACTGGGACGCTGGTTT...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCAAACCAGCGTCCCAGTaGAGTTCAAGTAGGACATGT +
Preference number: 2 (lower is better)
Translates to: LTLGARERAPPPVSPSAPKPASQ*SSSRTC
Trigger: ACATGTCCTACTTGAACTCCACTGGGACGCTGGTTT...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGTTCAACTCTAGAGAATaGTGCATGGAGGTCGGCTTT +
Preference number: 2 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGFNSRE*CMEVGF
Trigger: AAAGCCGACCTCCATGCATCATTCTCTAGAGTTGAA...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGGAACGTGAAGGGTGCTaGCTGGGAGGTCTTTGCTTC +
Preference number: 2 (lower is better)
Translates to: TCRLVLTLGARERAPPPVEREGC*LGGLCF
Trigger: GAAGCAAAGACCTCCCAGTCAGCACCCTTCACGTTC...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGGTGGGAGCACAGTGGTaGAATCTTGGCTCACTGCAG +
Preference number: 2 (lower is better)
Translates to: TCRLVLTLGARERAPPPVVGAQW*NLGSLQ
Trigger: CTGCAGTGAGCCAAGATTGCACCACTGTGCTCCCAC...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp GAAAGTCTGACCGCTGGGGAGGTTGCTCAACGACATCCAGGTGTATCGGCTCATACAGGGTCTCACTGTTaGCCAGGTGGGAGCACAGTG +
Preference number: 2 (lower is better)
Translates to: ESLTAGEVAQRHPGVSAHTGSHC*PGGSTV
Trigger: CACTGTGCTCCCACCTGGGCAACAGTGAGACCCTGT...ATGAGCCGATACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGTTCCAATTTGCCTTCTaGATCGGCACCTTAATGCAG +
Preference number: 2 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGFQFAF*IGTLMQ
Trigger: CTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAA...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACCAGGGACTCACTGTCTaGCAGTCTTCTACCGGATCT +
Preference number: 2 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHQGLTV*QSSTGS
Trigger: AGATCCGGTAGAAGACTGGCAGACAGTGAGTCCCTG...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp CCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCCCAGTGGAGTTCAAGAGGCAGCAGAACGAGTaGCGGCAGTTTGCCGGGGCG +
Preference number: 2 (lower is better)
Translates to: PCAQWFSKCQTSVPVEFKRQQNE*RQFAGA
Trigger: CGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCT...CTTGAACTCCACTGGGACGCTGGTTTGGCATTTACTAAACCACTGAGCACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACCATGTGACAACACTGTaGCACGGCATTATTGACCAT +
Preference number: 2 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHHVTTL*HGIIDH
Trigger: ATGGTCAATAATGCCGTGCCACAGTGTTGTCACATG...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACTCCCCTGACATGGGCTaGACCGGTACTAGCATTTTC +
Preference number: 2 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHSPDMG*TGTSIF
Trigger: GAAAATGCTAGTACCGGTCCAGCCCATGTCAGGGGA...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CAA 90 bp GGACACACCCACCGCGATGTCTGGCATCAGATCATTCAGCACAGGTaGTGTTCGCACTTGCTTCTCAGATGCTGCTGCTGCTGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: GHTHRDVWHQIIQHR*CSHLLLRCCCCCCC
Trigger: ACAGCAGCAGCAGCAGCAGCATCTGAGAAGCAAGTGCGAACACAACCTGTGCTGAATGATCTGATGCCAGACATCGCGGTGGGTGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATCTGGTCTTGAACTCCTaGGCTTCAGTGATCTGCCCG +
Preference number: 2 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYLVLNS*ASVICP
Trigger: CGGGCAGATCACTGAAGCTCAGGAGTTCAAGACCAG...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACACATGGAGGTCGGCTTTaGGCCCCACTGCCGCTGGCG +
Preference number: 2 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTHGGRL*APLPLA
Trigger: CGCCAGCGGCAGTGGGGCTCAAAGCCGACCTCCATG...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp ACTTGGAGGTTGCTCTCAGAGGGCAGACTTTTTGTAGAGGAAGTCCGGCTTGCTTGCACCTGCTCCGTGTaGCGCAGTTCCTGCAGTCGT +
Preference number: 2 (lower is better)
Translates to: TWRLLSEGRLFVEEVRLACTCSV*RSSCSR
Trigger: ACGACTGCAGGAACTGCGGCACACGGAGCAGGTGCA...AGCAAGCCGGACTTCCTCTACAAAAAGTCTGCCCTCTGAGAGCAACCTCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATCTGTCTGCCCAGTCCTaGAGTGCTGGTACAATCAGG +
Preference number: 2 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYLSAQS*SAGTIR
Trigger: CCTGATTGTACCAGCACTGCAGGACTGGGCAGACAG...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCATCCGGATATTCCTGTaGATTTTCTCTGGTGTCTGT +
Preference number: 2 (lower is better)
Translates to: LTLGARERAPPPVSPSAPIRIFL*IFSGVC
Trigger: ACAGACACCAGAGAAAATCCACAGGAATATCCGGAT...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp CCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCCCAGTGGAGTTCAAGCAAACTTCAGGACCCTaGCTGGACTCCCGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: PCAQWFSKCQTSVPVEFKQTSGP*LDSRWR
Trigger: CCTCCAGCGGGAGTCCAGTCAGGGTCCTGAAGTTTG...CTTGAACTCCACTGGGACGCTGGTTTGGCATTTACTAAACCACTGAGCACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGCAAACTTCAGGACCCTaGCTGGACTCCCGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: EDPERPHVLSGLVNAKPAQTSGP*LDSRWR
Trigger: CCTCCAGCGGGAGTCCAGTCAGGGTCCTGAAGTTTG...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCAGAAATCAGCGTTGTTaGCACCCAATAGAAAACCTA +
Preference number: 2 (lower is better)
Translates to: LTLGARERAPPPVSPSAPRNQRC*HPIENL
Trigger: TAGGTTTTCTATTGGGTGTCAACAACGCTGATTTCT...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGACACATCAAGGAACATaGCGGCATTCACTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGTHQGT*RHSLLF
Trigger: AAACAAAAGTGAATGCCGTCATGTTCCTTGATGTGT...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATGCTTCCAGCCTGCTTTaGGTTGGTTATGGATTGGGG +
Preference number: 2 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYASSLL*VGYGLG
Trigger: CCCCAATCCATAACCAACTCAAAGCAGGCTGGAAGC...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCCAGCCACCGTCTGTCTaGCCAGTCCTGCAGTGCTGG +
Preference number: 2 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCQPPSV*PVLQCW
Trigger: CCAGCACTGCAGGACTGGGCAGACAGACGGTGGCTG...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CAA 90 bp TGGCTTAATTCTGTGTCTACAGCAAGCTCTGGAAGCCTCCTGTCCTaGAGTGACAGTGTGGACACACCCACCGCGATGTCTGGCATCAGA +
Preference number: 2 (lower is better)
Translates to: WLNSVSTASSGSLLS*SDSVDTPTAMSGIR
Trigger: TCTGATGCCAGACATCGCGGTGGGTGTGTCCACACTGTCACTCAAGGACAGGAGGCTTCCAGAGCTTGCTGTAGACACAGAATTAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCCAAACTTCAGGACCCTaGCTGGACTCCCGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCQTSGP*LDSRWR
Trigger: CCTCCAGCGGGAGTCCAGTCAGGGTCCTGAAGTTTG...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGGCTACATGCAGAAAGTaGAGGTCTGTTAGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: TCRLVLTLGARERAPPPVATCRK*RSVRSQ
Trigger: CTGACTCCTAACAGACCTTCACTTTCTGCATGTAGC...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCAGGAGCATTCTGATGTaGTGTTCTTTGGAATTTCTA +
Preference number: 2 (lower is better)
Translates to: LTLGARERAPPPVSPSAPRSILM*CSLEFL
Trigger: TAGAAATTCCAAAGAACAGCACATCAGAATGCTCCT...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp GCGACATCTCCCAGGCTGTCTCATTGTCAAGAGTGGACTTTCATCCCCAAAACGGTGTGCCGCAGTTCCTaGAGTCGTCTGACCATGTCT +
Preference number: 2 (lower is better)
Translates to: ATSPRLSHCQEWTFIPKTVCRSS*SRLTMS
Trigger: AGACATGGTCAGACGACTGCAGGAACTGCGGCACAC...CGTTTTGGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp CCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCCCAGTGGAGTTCAAGATACACGACAGATGCTaGGGAGGCCCTGGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: PCAQWFSKCQTSVPVEFKIHDRC*GGPGPA
Trigger: AGCAGGACCAGGGCCTCCCCAGCATCTGTCGTGTAT...CTTGAACTCCACTGGGACGCTGGTTTGGCATTTACTAAACCACTGAGCACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CAA 90 bp ATGTCAATCCTTTCAACTCTAGAGAATGATGCATGGAGGTCGGCTTaGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: MSILSTLENDAWRSA*SPTAAGACFQFAFC
Trigger: GCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAAGCCGACCTCCATGCATCATTCTCTAGAGTTGAAAGGATTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATTCACAGCTGGAGAGTTaGCGCTCAGAACCAGAAATT +
Preference number: 2 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYSQLES*RSEPEI
Trigger: AATTTCTGGTTCTGAGCGTCAACTCTCCAGCTGTGA...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATAAGAAAGGATCTCTCTaGGCTCTTCCATGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYKKGSL*ALPCPG
Trigger: ACCTGGACATGGAAGAGCTCAGAGAGATCCTTTCTT...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp TCAGAAACTGACTGGCTTAATTCTGTGTCTACAGCAAGCTCTGGAAGCCTCCTGACAGGTGTGAGTCACTaGGCCCGGTCTCCACTGCTT +
Preference number: 2 (lower is better)
Translates to: SETDWLNSVSTASSGSLLTGVSH*ARSPLL
Trigger: AAGCAGTGGAGACCGGGCGCAGTGACTCACACCTGT...CAGGAGGCTTCCAGAGCTTGCTGTAGACACAGAATTAAGCCAGTCAGTTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp CCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCCCAGTGGAGTTCAAGGTGGGAGCACAGTGGTaGAATCTTGGCTCACTGCAG +
Preference number: 2 (lower is better)
Translates to: PCAQWFSKCQTSVPVEFKVGAQW*NLGSLQ
Trigger: CTGCAGTGAGCCAAGATTGCACCACTGTGCTCCCAC...CTTGAACTCCACTGGGACGCTGGTTTGGCATTTACTAAACCACTGAGCACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp GAAAGTCTGACCGCTGGGGAGGTTGCTCAACGACATCCAGGTGTATCGGCTCATTCACACTATGGGCAGTaGCACTCAGTAAGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: ESLTAGEVAQRHPGVSAHSHYGQ*HSVSLA
Trigger: AGCCAAACTTACTGAGTGGCACTGCCCATAGTGTGA...ATGAGCCGATACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACATGCACCTGCTCCGTGTaGCGCAGTTCCTGCAGTCGT +
Preference number: 2 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTCTCSV*RSSCSR
Trigger: ACGACTGCAGGAACTGCGGCACACGGAGCAGGTGCA...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp CCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCCCAGTGGAGTTCAAGAGAGGAAGTCCGGCTTaGTTGGTGACCTCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: PCAQWFSKCQTSVPVEFKRGSPA*LVTSFL
Trigger: GAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCT...CTTGAACTCCACTGGGACGCTGGTTTGGCATTTACTAAACCACTGAGCACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp TGTGTGGCTGATGCGTGGGATCTCCCTTTGCTTCCTTCCCGTGTTGGAGCCCATTGCTTCGTCATTTGGTaGAATACATTCCCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: CVADAWDLPLLPSRVGAHCFVIW*NTFPAA
Trigger: AGCTGCTGGGAATGTATTCCACCAAATGACGAAGCA...ATGGGCTCCAACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR CAA 90 bp AATGCCCACAAGACCTACTGTGTGGCTGATGCGTGGGATCTCCCTTaGCTTCCTTCCCGTGTTGGAGCCCATTTTCTAGATCCTTCACTT +
Preference number: 2 (lower is better)
Translates to: NAHKTYCVADAWDLP*LPSRVGAHFLDPSL
Trigger: AAGTGAAGGATCTAGAAAATGGGCTCCAACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACAGTAGGTCTTGTGGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR-3UTR TCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGAAGAGAGGAGCATTCTaGTGTGCTGTTCTTTGGAAT +
Preference number: 2 (lower is better)
Translates to: TCRLVLTLGARERAPPPVKRGAF*CAVLWN
Trigger: ATTCCAAAGAACAGCACATCAGAATGCTCCTCTCTT...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp GTTTACGCGACATCTCCCAGGCTGTCTCATTGTCAAGAGTGGACTTTCATCCCCAATGTGCAGGGATTCTaGCTGCATCCACACTGTGGA +
Preference number: 2 (lower is better)
Translates to: VYATSPRLSHCQEWTFIPNVQGF*LHPHCG
Trigger: TCCACAGTGTGGATGCAGTCAGAATCCCTGCACATT...GGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGCGTAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp ACTTTTTGTAGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTGCTTATTGTGGTGGCTGATCATGTaGCAACACTGTGGCACGGCA +
Preference number: 2 (lower is better)
Translates to: TFCRGSPACLVTSFLCLLWWLIM*QHCGTA
Trigger: TGCCGTGCCACAGTGTTGTCACATGATCAGCCACCA...CAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp ACTTTTTGTAGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTGCTTATTGGAACGTGAAGGGTGCTaGCTGGGAGGTCTTTGCTTC +
Preference number: 2 (lower is better)
Translates to: TFCRGSPACLVTSFLCLLEREGC*LGGLCF
Trigger: GAAGCAAAGACCTCCCAGTCAGCACCCTTCACGTTC...CAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCGAAGCCTCCTGTCCTTaGGTGACAGTGTGGACACAC +
Preference number: 2 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCEASCP*VTVWTH
Trigger: GTGTGTCCACACTGTCACTCAAGGACAGGAGGCTTC...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATTCTGCAAGCAGCATTTaGGAAGTCATAGAAATCCGG +
Preference number: 2 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYSASSI*EVIEIR
Trigger: CCGGATTTCTATGACTTCTCAAATGCTGCTTGCAGA...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCTAATTCCAAGGGATaGGATCTGTTTAGAGCCTCA +
Preference number: 2 (lower is better)
Translates to: TCRLVLTLGARERAPPPVSNSKG*DLFRAS
Trigger: TGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGA...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp GCGTGTTTCCAATTTGCCTTCTGCATCGGCACCTTAATGCAGATGTACAAGGACGTGGGAGCACAGTGGTaGAATCTTGGCTCACTGCAG +
Preference number: 2 (lower is better)
Translates to: ACFQFAFCIGTLMQMYKDVGAQW*NLGSLQ
Trigger: CTGCAGTGAGCCAAGATTGCACCACTGTGCTCCCAC...GTCCTTGTACATCTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAAACACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTTGCTTCTCAGATGCTaGTGCTGCTGCTGCTGTTGC +
Preference number: 2 (lower is better)
Translates to: EDPERPHVLSGLVNAKPALLLRC*CCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAGCATCTGAGAAGCAA...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATCTTTTGTTCACACTATaGGCAGTGCCACTCAGTAAG +
Preference number: 2 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYLLFTL*AVPLSK
Trigger: CTTACTGAGTGGCACTGCCCATAGTGTGAACAAAAG...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATAAGAGAGGAGCATTCTaGTGTGCTGTTCTTTGGAAT +
Preference number: 2 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYKRGAF*CAVLWN
Trigger: ATTCCAAAGAACAGCACATCAGAATGCTCCTCTCTT...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGTGCCGATCACAGGTGTaGGTCACTGCGCCCGGTCTC +
Preference number: 2 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWCRSQV*VTAPGL
Trigger: GAGACCGGGCGCAGTGACTCACACCTGTGATCGGCA...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp GAGCTACATGCAGAAAGTGAAGGTCTGTTAGGAGTCAGCCCAAAAGTCAAGTCACAAGGGAGAGGATCCTaGAAGACCCCATGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: ELHAESEGLLGVSPKVKSQGRGS*KTPCAQ
Trigger: CTGAGCACATGGGGTCTTTCAGGATCCTCTCCCTTG...TGACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACTTTCTGCATGTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATAACAGGGTCTCACTGTTaGCCAGGTGGGAGCACAGTG +
Preference number: 2 (lower is better)
Translates to: CKSHRSAIPQIKASFPFITGSHC*PGGSTV
Trigger: CACTGTGCTCCCACCTGGGCAACAGTGAGACCCTGT...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGCTCTTTTCTTCTAAGTaGTACGGCTGTGTGTTTATG +
Preference number: 2 (lower is better)
Translates to: TCRLVLTLGARERAPPPVLFSSK*YGCVFM
Trigger: CATAAACACACAGCCGTAGCACTTAGAAGAAAAGAG...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACGAGCCTCGAATGCGATaGACAGCCGACCTGCAGATT +
Preference number: 2 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHEPRMR*TADLQI
Trigger: AATCTGCAGGTCGGCTGTGCATCGCATTCGAGGCTC...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCCTTCTCAGATGCTGCTaGTGCTGCTGCTGTTGCTGT +
Preference number: 2 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCLLRCC*CCCCCC
Trigger: ACAGCAACAGCAGCAGCAGCAGCAGCATCTGAGAAG...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp CCGGTCTGGGCTAGACTGAATGCCCACAAGACCTACTGTGTGGCTGATGCGTGGATCTCTGTCTCAATTTaGAAGCTTTCCTCAAATGTC +
Preference number: 2 (lower is better)
Translates to: PVWARLNAHKTYCVADAWISVSI*KLSSNV
Trigger: GACATTTGAGGAAAGCTTCCAAATTGAGACAGAGAT...CCACGCATCAGCCACACAGTAGGTCTTGTGGGCATTCAGTCTAGCCCAGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
3UTR-3UTR CCA 90 bp GCGACATCTCCCAGGCTGTCTCATTGTCAAGAGTGGACTTTCATCCCCAAAACGGAACTGGAATTTCGTTaGCTACAACTGAAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: ATSPRLSHCQEWTFIPKTELEFR*LQLKEG
Trigger: GCCCTCCTTCAGTTGTAGCCAACGAAATTCCAGTTC...CGTTTTGGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp GAGCTACATGCAGAAAGTGAAGGTCTGTTAGGAGTCAGCCCAAAAGTCAAGTCATGGAGGGGGCAAGGGTaGATGGAAGGCCACAAAAGA +
Preference number: 2 (lower is better)
Translates to: ELHAESEGLLGVSPKVKSWRGQG*MEGHKR
Trigger: TCTTTTGTGGCCTTCCATCCACCCTTGCCCCCTCCA...TGACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACTTTCTGCATGTAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCTCCCCTGACATGGGCTaGACCGGTACTAGCATTTTC +
Preference number: 2 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCSPDMG*TGTSIF
Trigger: GAAAATGCTAGTACCGGTCCAGCCCATGTCAGGGGA...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CAA 90 bp CTGCAGGAGGTGTACTGTTTACGCGACATCTCCCAGGCTGTCTCATaGTCAAGAGTGGACTTTCATCCCCAAAACGTTCATCAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: LQEVYCLRDISQAVS*SRVDFHPQNVHQER
Trigger: TCTTTCCTGATGAACGTTTTGGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGCGTAAACAGTACACCTCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CAA 90 bp CATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTaGCTCTCAGAGGGCAGACTTTTTGTAGAGGAAGTCCGGCTTGCT +
Preference number: 2 (lower is better)
Translates to: HKMGCFTSQAQTTWR*LSEGRLFVEEVRLA
Trigger: AGCAAGCCGGACTTCCTCTACAAAAAGTCTGCCCTCTGAGAGCAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp TGTGTGGCTGATGCGTGGGATCTCCCTTTGCTTCCTTCCCGTGTTGGAGCCCATTTGTTCTTTTTGCTCTaGTCTCTGTCTCAATTTGGA +
Preference number: 2 (lower is better)
Translates to: CVADAWDLPLLPSRVGAHLFFLL*SLSQFG
Trigger: TCCAAATTGAGACAGAGATCAGAGCAAAAAGAACAA...ATGGGCTCCAACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
3UTR-3UTR TCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATACAAGGGAGAGGATCCTaGAAGACCCCATGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: CKSHRSAIPQIKASFPFIQGRGS*KTPCAQ
Trigger: CTGAGCACATGGGGTCTTTCAGGATCCTCTCCCTTG...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATATGTCAGATTATTCCTaGGTGTATATCCACAGGGTA +
Preference number: 2 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYMSDYS*VYIHRV
Trigger: TACCCTGTGGATATACACTCAGGAATAATCTGACAT...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATAGGGAAGGGTCAGGGATaGGAGTTTTTCTCCCCATCC +
Preference number: 2 (lower is better)
Translates to: CKSHRSAIPQIKASFPFIGKGQG*EFFSPS
Trigger: GGATGGGGAGAAAAACTCTCATCCCTGACCCTTCCC...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACGTGGCACGGCATTATTaGCCATGTAGAGCGTGTCTG +
Preference number: 2 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHVARHY*PCRACL
Trigger: CAGACACGCTCTACATGGTCAATAATGCCGTGCCAC...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp GCGTGTTTCCAATTTGCCTTCTGCATCGGCACCTTAATGCAGATGTACAAGGACAAATCTGTATTTCTCTaGGCTCCATGGCCCAGGGAC +
Preference number: 2 (lower is better)
Translates to: ACFQFAFCIGTLMQMYKDKSVFL*APWPRD
Trigger: GTCCCTGGGCCATGGAGCTCAGAGAAATACAGATTT...GTCCTTGTACATCTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAAACACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGAGGAGCATTCTGATGTaGTGTTCTTTGGAATTTCTA +
Preference number: 2 (lower is better)
Translates to: TCRLVLTLGARERAPPPVRSILM*CSLEFL
Trigger: TAGAAATTCCAAAGAACAGCACATCAGAATGCTCCT...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACTGTATCGTTTTACAATaGTTCACACAGACGAATTCA +
Preference number: 2 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHCIVLQ*FTQTNS
Trigger: TGAATTCGTCTGTGTGAAGCATTGTAAAACGATACA...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACGGTACAATCAGGCGGTaGAGCTTTCACACTCGGCAA +
Preference number: 2 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHGTIRR*SFHTRQ
Trigger: TTGCCGAGTGTGAAAGCTGCACCGCCTGATTGTACC...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp GCGTGTTTCCAATTTGCCTTCTGCATCGGCACCTTAATGCAGATGTACAAGGACAGACGACTTGGAGGTTaGTCTCAGAGGGCAGACTTT +
Preference number: 2 (lower is better)
Translates to: ACFQFAFCIGTLMQMYKDRRLGG*SQRADF
Trigger: AAAGTCTGCCCTCTGAGAGCAACCTCCAAGTCGTCT...GTCCTTGTACATCTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAAACACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGAAGACAGACAGAGACTaGGCTTCAAAAGACACCGTC +
Preference number: 2 (lower is better)
Translates to: EDPERPHVLSGLVNAKPAKTDRD*ASKDTV
Trigger: GACGGTGTCTTTTGAAGCCCAGTCTCTGTCTGTCTT...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp CTGGCATCAGATCATTCAGCACAGGTTGTGTTCGCACTTGCTTCTCAGATGCTGGAACTGGAATTTCGTTaGCTACAACTGAAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: LASDHSAQVVFALASQMLELEFR*LQLKEG
Trigger: GCCCTCCTTCAGTTGTAGCCAACGAAATTCCAGTTC...CAGCATCTGAGAAGCAAGTGCGAACACAACCTGTGCTGAATGATCTGATGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp CTGGCATCAGATCATTCAGCACAGGTTGTGTTCGCACTTGCTTCTCAGATGCTGCAGCCTGCTTTGAGTTaGTTATGGATTGGGGTAGCT +
Preference number: 2 (lower is better)
Translates to: LASDHSAQVVFALASQMLQPALS*LWIGVA
Trigger: AGCTACCCCAATCCATAACCAACTCAAAGCAGGCTG...CAGCATCTGAGAAGCAAGTGCGAACACAACCTGTGCTGAATGATCTGATGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATAGTGAAGGGTGCTGACTaGGAGGTCTTTGCTTCCAGC +
Preference number: 2 (lower is better)
Translates to: CKSHRSAIPQIKASFPFIVKGAD*EVFASS
Trigger: GCTGGAAGCAAAGACCTCCCAGTCAGCACCCTTCAC...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACAACCCACCGCGATGTCTaGCATCAGATCATTCAGCAC +
Preference number: 2 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTTHRDV*HQIIQH
Trigger: GTGCTGAATGATCTGATGCCAGACATCGCGGTGGGT...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CAA 90 bp TCTCTGAGCTCTTCCATGTCCAGGTCCCGTCTTTTTACACCTCTTTaGTTCACACTATGGGCAGTGCCACTCAGTAAGTTTGGCTCTCTA +
Preference number: 2 (lower is better)
Translates to: SLSSSMSRSRLFTPL*FTLWAVPLSKFGSL
Trigger: TAGAGAGCCAAACTTACTGAGTGGCACTGCCCATAGTGTGAACAAAAGAGGTGTAAAAAGACGGGACCTGGACATGGAAGAGCTCAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CAA 90 bp GTTGCTCTCAGAGGGCAGACTTTTTGTAGAGGAAGTCCGGCTTGCTaGGTGACCTCCTTCCTCTGCTTATTGAATCTTCCCTTTCCAAAT +
Preference number: 2 (lower is better)
Translates to: VALRGQTFCRGSPAC*VTSFLCLLNLPFPN
Trigger: ATTTGGAAAGGGAAGATTCAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGTCTGCCCTCTGAGAGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp TCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAGGGGATTGTTCTTTTTGCTCTaGTCTCTGTCTCAATTTGGA +
Preference number: 2 (lower is better)
Translates to: SSFGGIHSQQLPEWGSRGLFFLL*SLSQFG
Trigger: TCCAAATTGAGACAGAGATCAGAGCAAAAAGAACAA...TCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
3UTR-3UTR TCA 90 bp GAGCTACATGCAGAAAGTGAAGGTCTGTTAGGAGTCAGCCCAAAAGTCAAGTCAAATGTGCAGGGATTCTaGCTGCATCCACACTGTGGA +
Preference number: 2 (lower is better)
Translates to: ELHAESEGLLGVSPKVKSNVQGF*LHPHCG
Trigger: TCCACAGTGTGGATGCAGTCAGAATCCCTGCACATT...TGACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACTTTCTGCATGTAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp CCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCCCAGTGGAGTTCAAGGATTGTCCAAAGGCCTaGTTGTCCACGATCTCAAAA +
Preference number: 2 (lower is better)
Translates to: PCAQWFSKCQTSVPVEFKDCPKA*LSTISK
Trigger: TTTTGAGATCGTGGACAATCAGGCCTTTGGACAATC...CTTGAACTCCACTGGGACGCTGGTTTGGCATTTACTAAACCACTGAGCACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp GCGTGTTTCCAATTTGCCTTCTGCATCGGCACCTTAATGCAGATGTACAAGGACAAGAAAGGATCTCTCTaGGCTCTTCCATGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: ACFQFAFCIGTLMQMYKDKKGSL*ALPCPG
Trigger: ACCTGGACATGGAAGAGCTCAGAGAGATCCTTTCTT...GTCCTTGTACATCTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAAACACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp GTTTACGCGACATCTCCCAGGCTGTCTCATTGTCAAGAGTGGACTTTCATCCCCTCAGGAAAGAATTTGTaGGGATTCTGCAACAGCTCT +
Preference number: 2 (lower is better)
Translates to: VYATSPRLSHCQEWTFIPSGKNL*GFCNSS
Trigger: AGAGCTGTTGCAGAATCCTCACAAATTCTTTCCTGA...GGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGCGTAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp ACTTTTTGTAGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTGCTTATTGGCTACATGCAGAAAGTaGAGGTCTGTTAGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: TFCRGSPACLVTSFLCLLATCRK*RSVRSQ
Trigger: CTGACTCCTAACAGACCTTCACTTTCTGCATGTAGC...CAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp CTTCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAGGGACTTTAATAGCATCCTaGTTATGTCTCACTGATTCC +
Preference number: 2 (lower is better)
Translates to: LRHLVEYIPSSCLSGEAGTLIAS*LCLTDS
Trigger: GGAATCAGTGAGACATAAGCAGGATGCTATTAAAGT...CCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
3UTR-3UTR GCA 90 bp GAGCTACATGCAGAAAGTGAAGGTCTGTTAGGAGTCAGCCCAAAAGTCAAGTCAGGTTGTGTTCGCACTTaGTTCTCAGATGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: ELHAESEGLLGVSPKVKSGCVRT*FSDAAA
Trigger: AGCAGCAGCATCTGAGAAGCAAGTGCGAACACAACC...TGACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACTTTCTGCATGTAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp TGGCTGATGCGTGGGATCTCCCTTTGCTTCCTTCCCGTGTTGGAGCCCATTTTCTTTTCCATCAGCTTTTaGAAGACACTACTTCACTGT +
Preference number: 2 (lower is better)
Translates to: WLMRGISLCFLPVLEPIFFSISF*KTLLHC
Trigger: ACAGTGAAGTAGTGTCTTCCAAAAGCTGATGGAAAA...GAAAATGGGCTCCAACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR-3UTR CCA 90 bp CTGGCATCAGATCATTCAGCACAGGTTGTGTTCGCACTTGCTTCTCAGATGCTGCTTTTGTTCACACTATaGGCAGTGCCACTCAGTAAG +
Preference number: 2 (lower is better)
Translates to: LASDHSAQVVFALASQMLLLFTL*AVPLSK
Trigger: CTTACTGAGTGGCACTGCCCATAGTGTGAACAAAAG...CAGCATCTGAGAAGCAAGTGCGAACACAACCTGTGCTGAATGATCTGATGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACCAGTGGTTTAGTAAATaGCAAACCAGCGTCCCAGTG +
Preference number: 2 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHQWFSK*QTSVPV
Trigger: CACTGGGACGCTGGTTTGGCATTTACTAAACCACTG...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp CCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCCCAGTGGAGTTCAAGTCTTTGCTTCCAGCCTaGTTTGAGTTGGTTATGGAT +
Preference number: 2 (lower is better)
Translates to: PCAQWFSKCQTSVPVEFKSLLPA*FELVMD
Trigger: ATCCATAACCAACTCAAAGCAGGCTGGAAGCAAAGA...CTTGAACTCCACTGGGACGCTGGTTTGGCATTTACTAAACCACTGAGCACATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp TTCACAAGATACATTAAAAGTCCACTAACACCTAACCTAACGCACACAAAACCCGACCGCTGGGGAGGTTaGTCAACGACATCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: FTRYIKSPLTPNLTHTKPDRWGG*STTSRC
Trigger: ACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTC...GGGTTTTGTGTGCGTTAGGTTAGGTGTTAGTGGACTTTTAATGTATCTTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACCAAGTCAGTTTCTACTaGAGTTCGTCCCCTGACATG +
Preference number: 2 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHQVSFY*SSSPDM
Trigger: CATGTCAGGGGACGAACTGCAGTAGAAACTGACTTG...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp ACAAGACCTACTGTGTGGCTGATGCGTGGGATCTCCCTTTGCTTCCTTCCCGTGTACTTCACTGTATTGTaGTATTCAGTTGTTGCTACT +
Preference number: 2 (lower is better)
Translates to: TRPTVWLMRGISLCFLPVYFTVL*YSVVAT
Trigger: AGTAGCAACAACTGAATACCACAATACAGTGAAGTA...CACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACAGTAGGTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR-3UTR CCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGCTGGCATTGATGAACTaGTCTGTAAGTTGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: EDPERPHVLSGLVNAKPALALMN*SVSCWV
Trigger: AACCCAACAACTTACAGACCAGTTCATCAATGCCAG...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp CCCGGTCTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATACTGCATCCACACTGTaGAAATGTAACAGCTTTAGC +
Preference number: 2 (lower is better)
Translates to: PGLHCFLIPRDAICLEPHTASTL*KCNSFS
Trigger: GCTAAAGCTGTTACATTTCCACAGTGTGGATGCAGT...ATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAGACCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCACCCCATGTGCTCAGTaGTTTAGTAAATGCCAAACC +
Preference number: 2 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCTPCAQ*FSKCQT
Trigger: GGTTTGGCATTTACTAAACCACTGAGCACATGGGGT...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp ACTTTTTGTAGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTGCTTATTGGTGTGTATGTCTCTGTaGAATACACGACAGATGCTG +
Preference number: 2 (lower is better)
Translates to: TFCRGSPACLVTSFLCLLVCMSL*NTRQML
Trigger: CAGCATCTGTCGTGTATTCCACAGAGACATACACAC...CAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp GCGTGTTTCCAATTTGCCTTCTGCATCGGCACCTTAATGCAGATGTACAAGGACAAGAGAGGAGCATTCTaGTGTGCTGTTCTTTGGAAT +
Preference number: 2 (lower is better)
Translates to: ACFQFAFCIGTLMQMYKDKRGAF*CAVLWN
Trigger: ATTCCAAAGAACAGCACATCAGAATGCTCCTCTCTT...GTCCTTGTACATCTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAAACACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp TTCACAAGATACATTAAAAGTCCACTAACACCTAACCTAACGCACACAAAACCCCTGGTCTTGAACTCCTaGGCTTCAGTGATCTGCCCG +
Preference number: 2 (lower is better)
Translates to: FTRYIKSPLTPNLTHTKPLVLNS*ASVICP
Trigger: CGGGCAGATCACTGAAGCTCAGGAGTTCAAGACCAG...GGGTTTTGTGTGCGTTAGGTTAGGTGTTAGTGGACTTTTAATGTATCTTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp ACTTTTTGTAGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTGCTTATTGTCAGGAAAGAATTTGTaGGGATTCTGCAACAGCTCT +
Preference number: 2 (lower is better)
Translates to: TFCRGSPACLVTSFLCLLSGKNL*GFCNSS
Trigger: AGAGCTGTTGCAGAATCCTCACAAATTCTTTCCTGA...CAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp GCATGTGAGAACGGGCGTGGAAAATTGAAACAATTACGTTTCAAATACTTTTTGGACCGCTGGGGAGGTTaGTCAACGACATCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: ACENGRGKLKQLRFKYFLDRWGG*STTSRC
Trigger: ACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTC...CAAAAAGTATTTGAAACGTAATTGTTTCAATTTTCCACGCCCGTTCTCACATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp AAGACCTACTGTGTGGCTGATGCGTGGGATCTCCCTTTGCTTCCTTCCCGTGTTTCCTATTTCTTTGCATaGAACCTAATTTTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: KTYCVADAWDLPLLPSRVSYFFA*NLIFLL
Trigger: GAGGAGAAAAATTAGGTTCCATGCAAAGAAATAGGA...AACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACAGTAGGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR-3UTR CCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATAGTAACAGCTTTAGCCTaGGCACAGAAGGCTTTTCTC +
Preference number: 2 (lower is better)
Translates to: CKSHRSAIPQIKASFPFIVTALA*AQKAFL
Trigger: GAGAAAAGCCTTCTGTGCCCAGGCTAAAGCTGTTAC...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp GCATGTGAGAACGGGCGTGGAAAATTGAAACAATTACGTTTCAAATACTTTTTGCAAGGGAGAGGATCCTaGAAGACCCCATGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: ACENGRGKLKQLRFKYFLQGRGS*KTPCAQ
Trigger: CTGAGCACATGGGGTCTTTCAGGATCCTCTCCCTTG...CAAAAAGTATTTGAAACGTAATTGTTTCAATTTTCCACGCCCGTTCTCACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp GCATGTGAGAACGGGCGTGGAAAATTGAAACAATTACGTTTCAAATACTTTTTGGTCCGGCTTGCTTGGTaGCCTCCTTCCTCTGCTTAT +
Preference number: 2 (lower is better)
Translates to: ACENGRGKLKQLRFKYFLVRLAW*PPSSAY
Trigger: ATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGAC...CAAAAAGTATTTGAAACGTAATTGTTTCAATTTTCCACGCCCGTTCTCACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp TTCACAAGATACATTAAAAGTCCACTAACACCTAACCTAACGCACACAAAACCCGCGCCCGGTCTCCACTaGTTTCTAATTCCAAGGGAT +
Preference number: 2 (lower is better)
Translates to: FTRYIKSPLTPNLTHTKPAPGLH*FLIPRD
Trigger: ATCCCTTGGAATTAGAAAGCAGTGGAGACCGGGCGC...GGGTTTTGTGTGCGTTAGGTTAGGTGTTAGTGGACTTTTAATGTATCTTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp ACTTTTTGTAGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTGCTTATTGCTCTTTTCTTCTAAGTaGTACGGCTGTGTGTTTATG +
Preference number: 2 (lower is better)
Translates to: TFCRGSPACLVTSFLCLLLFSSK*YGCVFM
Trigger: CATAAACACACAGCCGTAGCACTTAGAAGAAAAGAG...CAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp GCATGTGAGAACGGGCGTGGAAAATTGAAACAATTACGTTTCAAATACTTTTTGAAAAGGAGCCTCGAATaGGATGCACAGCCGACCTGC +
Preference number: 2 (lower is better)
Translates to: ACENGRGKLKQLRFKYFLKRSLE*DAQPTC
Trigger: GCAGGTCGGCTGTGCATCGCATTCGAGGCTCCTTTT...CAAAAAGTATTTGAAACGTAATTGTTTCAATTTTCCACGCCCGTTCTCACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGATGAAGGATGGCAGATaGAATAAAAAGTTTCTGAGG +
Preference number: 2 (lower is better)
Translates to: EDPERPHVLSGLVNAKPAMKDGR*NKKFLR
Trigger: CCTCAGAAACTTTTTATTGCATCTGCCATCCTTCAT...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp GAGCTACATGCAGAAAGTGAAGGTCTGTTAGGAGTCAGCCCAAAAGTCAAGTCAACTGCATCCACACTGTaGAAATGTAACAGCTTTAGC +
Preference number: 2 (lower is better)
Translates to: ELHAESEGLLGVSPKVKSTASTL*KCNSFS
Trigger: GCTAAAGCTGTTACATTTCCACAGTGTGGATGCAGT...TGACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACTTTCTGCATGTAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp GCATGTGAGAACGGGCGTGGAAAATTGAAACAATTACGTTTCAAATACTTTTTGGAAGGAGGGCTTGACTaGTTGCTGCTGATCTGCTGG +
Preference number: 2 (lower is better)
Translates to: ACENGRGKLKQLRFKYFLEGGLD*LLLICW
Trigger: CCAGCAGATCAGCAGCAACCAGTCAAGCCCTCCTTC...CAAAAAGTATTTGAAACGTAATTGTTTCAATTTTCCACGCCCGTTCTCACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATAGTGTGTATGTCTCTGTaGAATACACGACAGATGCTG +
Preference number: 2 (lower is better)
Translates to: CKSHRSAIPQIKASFPFIVCMSL*NTRQML
Trigger: CAGCATCTGTCGTGTATTCCACAGAGACATACACAC...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCAGGAGCATTCTGATGTaGTGTTCTTTGGAATTTCTA +
Preference number: 2 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCRSILM*CSLEFL
Trigger: TAGAAATTCCAAAGAACAGCACATCAGAATGCTCCT...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACTGTAAACATGGTTTCTaGAGGAGGTGTACTGTTTAC +
Preference number: 2 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHCKHGF*RRCTVY
Trigger: GTAAACAGTACACCTCCTGCAGAAACCATGTTTACA...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGGAGGAGACGAGGAACTaGAATTTCGTTGGCTACAAC +
Preference number: 2 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWEETRN*NFVGYN
Trigger: GTTGTAGCCAACGAAATTCCAGTTCCTCGTCTCCTC...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CCA 90 bp TTCACAAGATACATTAAAAGTCCACTAACACCTAACCTAACGCACACAAAACCCGGTGATGCCTTATTGTaGCTGTACAGATCGGGACCA +
Preference number: 2 (lower is better)
Translates to: FTRYIKSPLTPNLTHTKPGDALL*LYRSGP
Trigger: TGGTCCCGATCTGTACAGCCACAATAAGGCATCACC...GGGTTTTGTGTGCGTTAGGTTAGGTGTTAGTGGACTTTTAATGTATCTTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CAA 90 bp GAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTaGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGA +
Preference number: 2 (lower is better)
Translates to: ETELSAGIDELVCKL*GYIIKWDVSHLRHR
Trigger: TCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
3UTR CAA 90 bp TGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTaGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCAC +
Preference number: 2 (lower is better)
Translates to: CETELSAGIDELVCK*LGYIIKWDVSHLRH
Trigger: GTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
3UTR-3UTR TCA 90 bp GCATGTGAGAACGGGCGTGGAAAATTGAAACAATTACGTTTCAAATACTTTTTGAATGTGCAGGGATTCTaGCTGCATCCACACTGTGGA +
Preference number: 2 (lower is better)
Translates to: ACENGRGKLKQLRFKYFLNVQGF*LHPHCG
Trigger: TCCACAGTGTGGATGCAGTCAGAATCCCTGCACATT...CAAAAAGTATTTGAAACGTAATTGTTTCAATTTTCCACGCCCGTTCTCACATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp TTCACAAGATACATTAAAAGTCCACTAACACCTAACCTAACGCACACAAAACCCTCACAGCTGGAGAGTTaGCGCTCAGAACCAGAAATT +
Preference number: 2 (lower is better)
Translates to: FTRYIKSPLTPNLTHTKPSQLES*RSEPEI
Trigger: AATTTCTGGTTCTGAGCGTCAACTCTCCAGCTGTGA...GGGTTTTGTGTGCGTTAGGTTAGGTGTTAGTGGACTTTTAATGTATCTTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp TCAGAAACTGACTGGCTTAATTCTGTGTCTACAGCAAGCTCTGGAAGCCTCCTGAAATACATCTTAGTGTaGAATCCAATGCACATGGAT +
Preference number: 2 (lower is better)
Translates to: SETDWLNSVSTASSGSLLKYILV*NPMHMD
Trigger: ATCCATGTGCATTGGATTGCACACTAAGATGTATTT...CAGGAGGCTTCCAGAGCTTGCTGTAGACACAGAATTAAGCCAGTCAGTTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACAAGGAGCATTCTGATGTaGTGTTCTTTGGAATTTCTA +
Preference number: 2 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTRSILM*CSLEFL
Trigger: TAGAAATTCCAAAGAACAGCACATCAGAATGCTCCT...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp TTCACAAGATACATTAAAAGTCCACTAACACCTAACCTAACGCACACAAAACCCCTGTTGAGTCTTACTTaGAGTACCGGCGCAGTACAT +
Preference number: 2 (lower is better)
Translates to: FTRYIKSPLTPNLTHTKPLLSLT*STGAVH
Trigger: ATGTACTGCGCCGGTACTGCAAGTAAGACTCAACAG...GGGTTTTGTGTGCGTTAGGTTAGGTGTTAGTGGACTTTTAATGTATCTTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR GCA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACAATGAAGGATGGCAGATaGAATAAAAAGTTTCTGAGG +
Preference number: 2 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTMKDGR*NKKFLR
Trigger: CCTCAGAAACTTTTTATTGCATCTGCCATCCTTCAT...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp CATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGATTCTTTTCATCAACTaGTGCTCTCCCCATTTAATC +
Preference number: 2 (lower is better)
Translates to: HVKPSYQLALMNWSVSCWILFIN*CSPHLI
Trigger: GATTAAATGGGGAGAGCATCAGTTGATGAAAAGAAT...CCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp GCATGTGAGAACGGGCGTGGAAAATTGAAACAATTACGTTTCAAATACTTTTTGCAGTGGTTTAGTAAATaGCAAACCAGCGTCCCAGTG +
Preference number: 2 (lower is better)
Translates to: ACENGRGKLKQLRFKYFLQWFSK*QTSVPV
Trigger: CACTGGGACGCTGGTTTGGCATTTACTAAACCACTG...CAAAAAGTATTTGAAACGTAATTGTTTCAATTTTCCACGCCCGTTCTCACATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp TTCACAAGATACATTAAAAGTCCACTAACACCTAACCTAACGCACACAAAACCCACCCCATGTGCTCAGTaGTTTAGTAAATGCCAAACC +
Preference number: 2 (lower is better)
Translates to: FTRYIKSPLTPNLTHTKPTPCAQ*FSKCQT
Trigger: GGTTTGGCATTTACTAAACCACTGAGCACATGGGGT...GGGTTTTGTGTGCGTTAGGTTAGGTGTTAGTGGACTTTTAATGTATCTTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGTGTAGGAAGCATATCTaGTGGAGGAGTACTAATCAA +
Preference number: 2 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWCRKHI*WRSTNQ
Trigger: TTGATTAGTACTCCTCCATCAGATATGCTTCCTACA...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp AAGCCTCTTTTCATTGCATCACTTAAGACTTCACTGTTTATAGGTAAGATGTGTTCACACTATGGGCAGTaGCACTCAGTAAGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: KPLFIASLKTSLFIGKMCSHYGQ*HSVSLA
Trigger: AGCCAAACTTACTGAGTGGCACTGCCCATAGTGTGA...ACACATCTTACCTATAAACAGTGAAGTCTTAAGTGATGCAATGAAAAGAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR TCA 90 bp TTCACAAGATACATTAAAAGTCCACTAACACCTAACCTAACGCACACAAAACCCGAGCGGGAAGATCTCTaGACTAAAACAATTACTGAA +
Preference number: 2 (lower is better)
Translates to: FTRYIKSPLTPNLTHTKPEREDL*TKTITE
Trigger: TTCAGTAATTGTTTTAGTTCAGAGATCTTCCCGCTC...GGGTTTTGTGTGCGTTAGGTTAGGTGTTAGTGGACTTTTAATGTATCTTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR TCA 90 bp CAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTATTCTTTTCATCAACTaGTGCTCTCCCCATTTAATC +
Preference number: 2 (lower is better)
Translates to: QNHVKPSYQLALMNWSVSILFIN*CSPHLI
Trigger: GATTAAATGGGGAGAGCATCAGTTGATGAAAAGAAT...ACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR GCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGAAATACATCTTAGTGTaGAATCCAATGCACATGGAT +
Preference number: 2 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWKYILV*NPMHMD
Trigger: ATCCATGTGCATTGGATTGCACACTAAGATGTATTT...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CCA 90 bp ATACCATCTGATTCCTATTTCTTTGCATGGAACCTAATTTTTCTCCTCCCTGCAATCTCTGTCTCAATTTaGAAGCTTTCCTCAAATGTC +
Preference number: 2 (lower is better)
Translates to: IPSDSYFFAWNLIFLLPAISVSI*KLSSNV
Trigger: GACATTTGAGGAAAGCTTCCAAATTGAGACAGAGAT...TGCAGGGAGGAGAAAAATTAGGTTCCATGCAAAGAAATAGGAATCAGATGGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
3UTR-3UTR CCA 90 bp GTTCAAACATTGAAAGTAATTGATTTCTTCCGAGACACCTCTTTCCTTGGAGACTTTTCCATCAGCTTTTaGAAGACACTACTTCACTGT +
Preference number: 2 (lower is better)
Translates to: VQTLKVIDFFRDTSFLGDFSISF*KTLLHC
Trigger: ACAGTGAAGTAGTGTCTTCCAAAAGCTGATGGAAAA...GTCTCCAAGGAAAGAGGTGTCTCGGAAGAAATCAATTACTTTCAATGTTTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
3UTR-3UTR CCA 90 bp CCTACACAGGCAGTTTTTCGAGGTATGACTGAAAAATGCCTTTATTTAGCCTTATCCTATTTCTTTGCATaGAACCTAATTTTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: PTQAVFRGMTEKCLYLALSYFFA*NLIFLL
Trigger: GAGGAGAAAAATTAGGTTCCATGCAAAGAAATAGGA...TAAGGCTAAATAAAGGCATTTTTCAGTCATACCTCGAAAAACTGCCTGTGTAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR CAA 90 bp CATCAGCTTTTGGAAGACACTACTTCACTGTATTGTGGTATTCAGTaGTTGCTACTGAAAATCTCAATACCATCTGATTCCTATTTCTTT +
Preference number: 2 (lower is better)
Translates to: HQLLEDTTSLYCGIQ*LLLKISIPSDSYFF
Trigger: AAAGAAATAGGAATCAGATGGTATTGAGATTTTCAGTAGCAACAACTGAATACCACAATACAGTGAAGTAGTGTCTTCCAAAAGCTGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR-3UTR GCA 90 bp ACTTCACTGTATTGTGGTATTCAGTTGTTGCTACTGAAAATCTCAATACCATCTACTTTAATAGCATCCTaGTTATGTCTCACTGATTCC +
Preference number: 2 (lower is better)
Translates to: TSLYCGIQLLLLKISIPSTLIAS*LCLTDS
Trigger: GGAATCAGTGAGACATAAGCAGGATGCTATTAAAGT...AGATGGTATTGAGATTTTCAGTAGCAACAACTGAATACCACAATACAGTGAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
3UTR-3UTR CAA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGGCATGGAGGTCGGCTTaGAGCCCCACTGCCGCTGGC +
Preference number: 3 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGAWRSA*SPTAAG
Trigger: GCCAGCGGCAGTGGGGCTCAAAGCCGACCTCCATGC...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGGACAGGGTCTCACTGTaGCCCAGGTGGGAGCACAGT +
Preference number: 3 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGDRVSL*PRWEHS
Trigger: ACTGTGCTCCCACCTGGGCAACAGTGAGACCCTGTC...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGGGAGGGCTTGACTGGTaGCTGCTGATCTGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGGGLDW*LLICWW
Trigger: CCACCAGCAGATCAGCAGCAACCAGTCAAGCCCTCC...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR TCA 72 bp GCCCGCCTCGGCCTTCCGAAGTGCCGATCACAGGTGTaGGTCACTGCGCCCGGTCTCCACTGCTTTCTAATT +
Preference number: 3 (lower is better)
Translates to: ARLGLPKCRSQV*VTAPGLHCFLI
Trigger: AATTAGAAAGCAGTGGAGACCGGGCGCAGTGACTCACACCTGTGATCGGCACTTCGGAAGGCCGAGGCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR GCA 72 bp CTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTaGACCACCACCAGTGTCACCGAGCGCACCCGCACA +
Preference number: 3 (lower is better)
Translates to: LQISVNSGSSGA*TTTSVTERTRT
Trigger: TGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACTCCTTAGCTCACACATaGCCCTTCCAAGGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHSLAHT*PFQGRG
Trigger: TCCTCTCCCTTGGAAGGGCAATGTGTGAGCTAAGGA...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR GCA 72 bp CTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTaGCGGGGCGTGCAGACACACGACATGTTTCCCATC +
Preference number: 3 (lower is better)
Translates to: LTSQAAERVAAV*RGVQTHDMFPI
Trigger: GATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR GCA 72 bp TCTGCCCAGTCCTGCAGTGCTGGTACAATCAGGCGGTaGAGCTTTCACACTCGGCAAGTAGACTGGGGGAGG +
Preference number: 3 (lower is better)
Translates to: SAQSCSAGTIRR*SFHTRQVDWGR
Trigger: CCTCCCCCAGTCTACTTGCCGAGTGTGAAAGCTGCACCGCCTGATTGTACCAGCACTGCAGGACTGGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGATCATTCAGCACAGGTaGTGTTCGCACTTGCTTCTC +
Preference number: 3 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGIIQHR*CSHLLL
Trigger: GAGAAGCAAGTGCGAACACAACCTGTGCTGAATGAT...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR GCA 72 bp AGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTaGAGACACACGACATGTTTCCCATCTTGGAGACTA +
Preference number: 3 (lower is better)
Translates to: RQQNEWRQFAGA*RHTTCFPSWRL
Trigger: TAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR CCA 72 bp ATCAGGCGGTGCAGCTTTCACACTCGGCAAGTAGACTaGGGGAGGGCCAGCTTTAGGAGCTGTTCTGGAGTG +
Preference number: 3 (lower is better)
Translates to: IRRCSFHTRQVD*GRASFRSCSGV
Trigger: CACTCCAGAACAGCTCCTAAAGCTGGCCCTCCCCCAGTCTACTTGCCGAGTGTGAAAGCTGCACCGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGCAGACGACTTGGAGGTaGCTCTCAGAGGGCAGACTT +
Preference number: 3 (lower is better)
Translates to: TCRLVLTLGARERAPPPVQTTWR*LSEGRL
Trigger: AAGTCTGCCCTCTGAGAGCAACCTCCAAGTCGTCTG...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR TCA 72 bp CCTTGGAGACTTTCACCCTCCCGGTCTGGGCTAGACTaGATGCCCACAAGACCTACTGTGTGGCTGATGCGT +
Preference number: 3 (lower is better)
Translates to: PWRLSPSRSGLD*MPTRPTVWLMR
Trigger: ACGCATCAGCCACACAGTAGGTCTTGTGGGCATTCAGTCTAGCCCAGACCGGGAGGGTGAAAGTCTCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR CCA 72 bp CTGAATGCCCACAAGACCTACTGTGTGGCTGATGCGTaGGATCTCCCTTTGCTTCCTTCCCGTGTTGGAGCC +
Preference number: 3 (lower is better)
Translates to: LNAHKTYCVADA*DLPLLPSRVGA
Trigger: GGCTCCAACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACAGTAGGTCTTGTGGGCATTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR-3UTR CAA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACAGTTATCAGCTGGCATaGATGAACTGGTCTGTAAGT +
Preference number: 3 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHSYQLA*MNWSVS
Trigger: ACTTACAGACCAGTTCATCAATGCCAGCTGATAACT...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR TCA 72 bp TCCTGTTCTTTCCTGAACCAGCAAACTTCAGGACCCTaGCTGGACTCCCGCTGGAGGAATGAAGCCCAGCTC +
Preference number: 3 (lower is better)
Translates to: SCSFLNQQTSGP*LDSRWRNEAQL
Trigger: GAGCTGGGCTTCATTCCTCCAGCGGGAGTCCAGTCAGGGTCCTGAAGTTTGCTGGTTCAGGAAAGAACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR GCA 72 bp GGGGCTGCCAAAGGAAAGTCTGACCGCTGGGGAGGTTaGTCAACGACATCCAGGTGTATCGGCTCATTCTTT +
Preference number: 3 (lower is better)
Translates to: GAAKGKSDRWGG*STTSRCIGSFF
Trigger: AAAGAATGAGCCGATACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTCCTTTGGCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR GCA 72 bp ATTTCTCTGAGCTCCATGGCCCAGGGACTCACTGTCTaGCAGTCTTCTACCGGATCTCTCTTCGGGAGCTTC +
Preference number: 3 (lower is better)
Translates to: ISLSSMAQGLTV*QSSTGSLFGSF
Trigger: GAAGCTCCCGAAGAGAGATCCGGTAGAAGACTGGCAGACAGTGAGTCCCTGGGCCATGGAGCTCAGAGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp TCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAGGGGACTTCTGCTCCCTTCATaGTCTGCTTCCTCCAGGACT +
Preference number: 3 (lower is better)
Translates to: SSFGGIHSQQLPEWGSRGLLLPS*SASSRT
Trigger: AGTCCTGGAGGAAGCAGACAATGAAGGGAGCAGAAG...TCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
3UTR-3UTR CAA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACCTGGTCTGTAAGTTGTaGGGTTACATCATAAAATGG +
Preference number: 3 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHLVCKL*GYIIKW
Trigger: CCATTTTATGATGTAACCCAACAACTTACAGACCAG...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp GAAAGTCTGACCGCTGGGGAGGTTGCTCAACGACATCCAGGTGTATCGGCTCATCACAGTGGTGCAATCTaGGCTCACTGCAGTCTCAAC +
Preference number: 3 (lower is better)
Translates to: ESLTAGEVAQRHPGVSAHHSGAI*AHCSLN
Trigger: GTTGAGACTGCAGTGAGCCAAGATTGCACCACTGTG...ATGAGCCGATACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACAACGAGTGGCGGCAGTTaGCCGGGGCGTGCAGACACA +
Preference number: 3 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTTSGGS*PGRADT
Trigger: TGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGT...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACACGAGTGGCGGCAGTTaGCCGGGGCGTGCAGACACA +
Preference number: 3 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHTSGGS*PGRADT
Trigger: TGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGT...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCAGAACTGGTCTGTAAGTaGTTGGGTTACATCATAAAA +
Preference number: 3 (lower is better)
Translates to: ACTTTSVTERTRTAANQSELVCK*LGYIIK
Trigger: TTTTATGATGTAACCCAACAACTTACAGACCAGTTC...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACGACATGTTTCCCATCTaGGAGACTATCTACTGTTCG +
Preference number: 3 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHDMFPI*ETIYCS
Trigger: CGAACAGTAGATAGTCTCCAAGATGGGAAACATGTC...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp TCAGAAACTGACTGGCTTAATTCTGTGTCTACAGCAAGCTCTGGAAGCCTCCTGGGAGGGCTTGACTGGTaGCTGCTGATCTGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: SETDWLNSVSTASSGSLLGGLDW*LLICWW
Trigger: CCACCAGCAGATCAGCAGCAACCAGTCAAGCCCTCC...CAGGAGGCTTCCAGAGCTTGCTGTAGACACAGAATTAAGCCAGTCAGTTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR TCA 72 bp TTCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTaGGTGGGGAAGCAGGGGAAATATCCCTACACAGGC +
Preference number: 3 (lower is better)
Translates to: FVIWWNTFPAAA*VGKQGKYPYTG
Trigger: GCCTGTGTAGGGATATTTCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR GCA 72 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTaGCTTCTGCATCGGCACCTTAATGCAGATGTACAA +
Preference number: 3 (lower is better)
Translates to: FEPHCRWRVFPI*LLHRHLNADVQ
Trigger: TTGTACATCTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR GCA 72 bp GAAGTGTGTGTATGTCTCTGTGGAATACACGACAGATaGTGGGGAGGCCCTGGTCCTGCTTCAGAAACTGAC +
Preference number: 3 (lower is better)
Translates to: EVCVCLCGIHDR*WGGPGPASETD
Trigger: GTCAGTTTCTGAAGCAGGACCAGGGCCTCCCCAGCATCTGTCGTGTATTCCACAGAGACATACACACACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR GCA 72 bp GTTAGGAGTCAGCCCAAAAGTCAAGTCAGTTTCTACTaGAGTTCGTCCCCTGACATGGGCTGGACCGGTACT +
Preference number: 3 (lower is better)
Translates to: VRSQPKSQVSFY*SSSPDMGWTGT
Trigger: AGTACCGGTCCAGCCCATGTCAGGGGACGAACTGCAGTAGAAACTGACTTGACTTTTGGGCTGACTCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CCA 72 bp GCTGATCTGCTGGTGGCTGATCATGTGACAACACTGTaGCACGGCATTATTGACCATGTAGAGCGTGTCTGG +
Preference number: 3 (lower is better)
Translates to: ADLLVADHVTTL*HGIIDHVERVW
Trigger: CCAGACACGCTCTACATGGTCAATAATGCCGTGCCACAGTGTTGTCACATGATCAGCCACCAGCAGATCAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACGACAGGGTCTCACTGTaGCCCAGGTGGGAGCACAGT +
Preference number: 3 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHDRVSL*PRWEHS
Trigger: ACTGTGCTCCCACCTGGGCAACAGTGAGACCCTGTC...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATATCACAGCTGGAGAGTaGACGCTCAGAACCAGAAAT +
Preference number: 3 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYITAGE*TLRTRN
Trigger: ATTTCTGGTTCTGAGCGTCAACTCTCCAGCTGTGAT...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTGCCACTCAGTAAGTTaGGCTCTCTATCTGCTATTC +
Preference number: 3 (lower is better)
Translates to: TCRLVLTLGARERAPPPVCHSVS*ALYLLF
Trigger: GAATAGCAGATAGAGAGCCAAACTTACTGAGTGGCA...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGAGTTATCAGCTGGCATaGATGAACTGGTCTGTAAGT +
Preference number: 3 (lower is better)
Translates to: TCRLVLTLGARERAPPPVSYQLA*MNWSVS
Trigger: ACTTACAGACCAGTTCATCAATGCCAGCTGATAACT...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp GCGACATCTCCCAGGCTGTCTCATTGTCAAGAGTGGACTTTCATCCCCAAAACGGCGCACAAGATCCGTTaGTTCCACCATCATCTCATC +
Preference number: 3 (lower is better)
Translates to: ATSPRLSHCQEWTFIPKTAHKIR*FHHHLI
Trigger: GATGAGATGATGGTGGAACAAACGGATCTTGTGCGC...CGTTTTGGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR TCA 72 bp CAAACTCTCTTAGCACTCGAATCTGAATTTCATAGCTaGCAGTGGCGCCTTCCCCGCAGTTCAGGGCATAGG +
Preference number: 3 (lower is better)
Translates to: QTLLALESEFHS*QWRLPRSSGHR
Trigger: CCTATGCCCTGAACTGCGGGGAAGGCGCCACTGTCAGCTATGAAATTCAGATTCGAGTGCTAAGAGAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CCA 72 bp TCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTaGGGAAGCAGGGGAAATATCCCTACACAGGCAGTT +
Preference number: 3 (lower is better)
Translates to: SFGGIHSQQLPE*GSRGNIPTQAV
Trigger: AACTGCCTGTGTAGGGATATTTCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR CCA 72 bp CTGTGGCACGGCATTATTGACCATGTAGAGCGTGTCTaGCACATTGGACATTCTAACCATTCGCAAGCGCAC +
Preference number: 3 (lower is better)
Translates to: LWHGIIDHVERV*HIGHSNHSQAH
Trigger: GTGCGCTTGCGAATGGTTAGAATGTCCAATGTGCCAGACACGCTCTACATGGTCAATAATGCCGTGCCACAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCTCCTTAGCTCACACATaGCCCTTCCAAGGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCSLAHT*PFQGRG
Trigger: TCCTCTCCCTTGGAAGGGCAATGTGTGAGCTAAGGA...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATGAGAAATCAGCGTTGTaGACACCCAATAGAAAACCT +
Preference number: 3 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYEKSAL*TPNRKP
Trigger: AGGTTTTCTATTGGGTGTCAACAACGCTGATTTCTC...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR GCA 72 bp TGCGCCCGGTCTCCACTGCTTTCTAATTCCAAGGGATaGGATCTGTTTAGAGCCTCATCTGGTGACTCTAAT +
Preference number: 3 (lower is better)
Translates to: CARSPLLSNSKG*DLFRASSGDSN
Trigger: ATTAGAGTCACCAGATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAGACCGGGCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR CCA 72 bp TTAAAGGCAGCAAGCAGTCAGTTCCGCCATCACAGCTaGAGAGTTGACGCTCAGAACCAGAAATTCTGTCAG +
Preference number: 3 (lower is better)
Translates to: LKAASSQFRHHS*RVDAQNQKFCQ
Trigger: CTGACAGAATTTCTGGTTCTGAGCGTCAACTCTCCAGCTGTGATGGCGGAACTGACTGCTTGCTGCCTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp GCATGTGAGAACGGGCGTGGAAAATTGAAACAATTACGTTTCAAATACTTTTTGACGAGTGGCGGCAGTTaGCCGGGGCGTGCAGACACA +
Preference number: 3 (lower is better)
Translates to: ACENGRGKLKQLRFKYFLTSGGS*PGRADT
Trigger: TGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGT...CAAAAAGTATTTGAAACGTAATTGTTTCAATTTTCCACGCCCGTTCTCACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCGGAACTGGAATTTCGTaGGCTACAACTGAAGGAGGG +
Preference number: 3 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCGTGIS*ATTEGG
Trigger: CCCTCCTTCAGTTGTAGCCAACGAAATTCCAGTTCC...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp GCGTGTTTCCAATTTGCCTTCTGCATCGGCACCTTAATGCAGATGTACAAGGACCTTGGTGATGCCTTATaGTGGCTGTACAGATCGGGA +
Preference number: 3 (lower is better)
Translates to: ACFQFAFCIGTLMQMYKDLGDAL*WLYRSG
Trigger: TCCCGATCTGTACAGCCACAATAAGGCATCACCAAG...GTCCTTGTACATCTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAAACACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR TCA 72 bp TCTCTCTTCGGGAGCTTCAGAGCTACATGCAGAAAGTaGAGGTCTGTTAGGAGTCAGCCCAAAAGTCAAGTC +
Preference number: 3 (lower is better)
Translates to: SLFGSFRATCRK*RSVRSQPKSQV
Trigger: GACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACTTTCTGCATGTAGCTCTGAAGCTCCCGAAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR GCA 72 bp TCCAGGTGTATCGGCTCATTCTTTTGTCTGTGTAGATaGCCGTCAGGGGAAAGTGGATATTCTCTCCTAGCT +
Preference number: 3 (lower is better)
Translates to: SRCIGSFFCLCR*PSGESGYSLLA
Trigger: AGCTAGGAGAGAATATCCACTTTCCCCTGACGGGCATCTACACAGACAAAAGAATGAGCCGATACACCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR GCA 72 bp CTCAGAGGGCAGACTTTTTGTAGAGGAAGTCCGGCTTaGTTGGTGACCTCCTTCCTCTGCTTATTGAATCTT +
Preference number: 3 (lower is better)
Translates to: LRGQTFCRGSPA*LVTSFLCLLNL
Trigger: AAGATTCAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGTCTGCCCTCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp CTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCTGGTGAAAGTGCCAGCCTGCTaGTTCTTAAAAATGCCTCCC +
Preference number: 3 (lower is better)
Translates to: LHCFLIPRDAICLEPHLVKVPAC*FLKMPP
Trigger: GGGAGGCATTTTTAAGAACAAGCAGGCTGGCACTTT...CACCAGATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp GCGTGTTTCCAATTTGCCTTCTGCATCGGCACCTTAATGCAGATGTACAAGGACAAAGTGCCAGCCTGCTaGTTCTTAAAAATGCCTCCC +
Preference number: 3 (lower is better)
Translates to: ACFQFAFCIGTLMQMYKDKVPAC*FLKMPP
Trigger: GGGAGGCATTTTTAAGAACAAGCAGGCTGGCACTTT...GTCCTTGTACATCTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAAACACGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATATCCTTAGCTCACACATaGCCCTTCCAAGGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: CKSHRSAIPQIKASFPFISLAHT*PFQGRG
Trigger: TCCTCTCCCTTGGAAGGGCAATGTGTGAGCTAAGGA...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACGGAACTGGAATTTCGTaGGCTACAACTGAAGGAGGG +
Preference number: 3 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHGTGIS*ATTEGG
Trigger: CCCTCCTTCAGTTGTAGCCAACGAAATTCCAGTTCC...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp TCAGAAACTGACTGGCTTAATTCTGTGTCTACAGCAAGCTCTGGAAGCCTCCTGTCCCAGGCTGTCTCATaGTCAAGAGTGGACTTTCAT +
Preference number: 3 (lower is better)
Translates to: SETDWLNSVSTASSGSLLSQAVS*SRVDFH
Trigger: ATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGA...CAGGAGGCTTCCAGAGCTTGCTGTAGACACAGAATTAAGCCAGTCAGTTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCCTGACTTTAAGCCACTaGGTGATGCCTTATTGTGGC +
Preference number: 3 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCLTLSH*VMPYCG
Trigger: GCCACAATAAGGCATCACCAAGTGGCTTAAAGTCAG...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp CCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCCCAGTGGAGTTCAAGTGGGAGAAATCAGCGTaGTTGACACCCAATAGAAAA +
Preference number: 3 (lower is better)
Translates to: PCAQWFSKCQTSVPVEFKWEKSA*LTPNRK
Trigger: TTTTCTATTGGGTGTCAACAACGCTGATTTCTCCCA...CTTGAACTCCACTGGGACGCTGGTTTGGCATTTACTAAACCACTGAGCACATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGCAAGGACTAAGCTCATaGCTAGAATGGCAACAACAA +
Preference number: 3 (lower is better)
Translates to: EDPERPHVLSGLVNAKPAQGLSS*LEWQQQ
Trigger: TTGTTGTTGCCATTCTAGCAATGAGCTTAGTCCTTG...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp GCGACATCTCCCAGGCTGTCTCATTGTCAAGAGTGGACTTTCATCCCCAAAACGTCAAGCCTCTTTTCATaGCATCACTTAAGACTTCAC +
Preference number: 3 (lower is better)
Translates to: ATSPRLSHCQEWTFIPKTSSLFS*HHLRLH
Trigger: GTGAAGTCTTAAGTGATGCAATGAAAAGAGGCTTGA...CGTTTTGGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp GAGCTACATGCAGAAAGTGAAGGTCTGTTAGGAGTCAGCCCAAAAGTCAAGTCAATCATTCAGCACAGGTaGTGTTCGCACTTGCTTCTC +
Preference number: 3 (lower is better)
Translates to: ELHAESEGLLGVSPKVKSIIQHR*CSHLLL
Trigger: GAGAAGCAAGTGCGAACACAACCTGTGCTGAATGAT...TGACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACTTTCTGCATGTAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR GCA 72 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTaGAGGGATTCTGACTGCATCCACACTGTGGAAATG +
Preference number: 3 (lower is better)
Translates to: PHLVTLILMTRM*RDSDCIHTVEM
Trigger: CATTTCCACAGTGTGGATGCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR CCA 72 bp AAAATGGGATGTTTCACATCTCAGGCACAGACGACTTaGAGGTTGCTCTCAGAGGGCAGACTTTTTGTAGAG +
Preference number: 3 (lower is better)
Translates to: KMGCFTSQAQTT*RLLSEGRLFVE
Trigger: CTCTACAAAAAGTCTGCCCTCTGAGAGCAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACAGACATGTTTCCCATCTaGGAGACTATCTACTGTTCG +
Preference number: 3 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTDMFPI*ETIYCS
Trigger: CGAACAGTAGATAGTCTCCAAGATGGGAAACATGTC...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACATGCCACTCAGTAAGTTaGGCTCTCTATCTGCTATTC +
Preference number: 3 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTCHSVS*ALYLLF
Trigger: GAATAGCAGATAGAGAGCCAAACTTACTGAGTGGCA...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp TCAGAAACTGACTGGCTTAATTCTGTGTCTACAGCAAGCTCTGGAAGCCTCCTGCTTTTTACACCTCTTTaGTTCACACTATGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: SETDWLNSVSTASSGSLLLFTPL*FTLWAV
Trigger: CACTGCCCATAGTGTGAACAAAAGAGGTGTAAAAAG...CAGGAGGCTTCCAGAGCTTGCTGTAGACACAGAATTAAGCCAGTCAGTTTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR GCA 72 bp AGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTaGTTATTGAATCTTCCCTTTCCAAATCTGTATTTC +
Preference number: 3 (lower is better)
Translates to: RGSPACLVTSFL*LLNLPFPNLYF
Trigger: GAAATACAGATTTGGAAAGGGAAGATTCAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CCA 72 bp AGGTCCCGTCTTTTTACACCTCTTTTGTTCACACTATaGGCAGTGCCACTCAGTAAGTTTGGCTCTCTATCT +
Preference number: 3 (lower is better)
Translates to: RSRLFTPLLFTL*AVPLSKFGSLS
Trigger: AGATAGAGAGCCAAACTTACTGAGTGGCACTGCCCATAGTGTGAACAAAAGAGGTGTAAAAAGACGGGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp GAGCTACATGCAGAAAGTGAAGGTCTGTTAGGAGTCAGCCCAAAAGTCAAGTCAAGTTATCAGCTGGCATaGATGAACTGGTCTGTAAGT +
Preference number: 3 (lower is better)
Translates to: ELHAESEGLLGVSPKVKSSYQLA*MNWSVS
Trigger: ACTTACAGACCAGTTCATCAATGCCAGCTGATAACT...TGACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACTTTCTGCATGTAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR-3UTR CAA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACACAAGGACTAAGCTCATaGCTAGAATGGCAACAACAA +
Preference number: 3 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTQGLSS*LEWQQQ
Trigger: TTGTTGTTGCCATTCTAGCAATGAGCTTAGTCCTTG...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp ACTTTTTGTAGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTGCTTATTGTCAAGCCTCTTTTCATaGCATCACTTAAGACTTCAC +
Preference number: 3 (lower is better)
Translates to: TFCRGSPACLVTSFLCLLSSLFS*HHLRLH
Trigger: GTGAAGTCTTAAGTGATGCAATGAAAAGAGGCTTGA...CAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR TCA 72 bp TCTGTTGAGTCTTACTTGCAGTACCGGCGCAGTACATaGACATGTCAACATACATATGTGGCAGAAACACAC +
Preference number: 3 (lower is better)
Translates to: SVESYLQYRRST*TCQHTYVAETH
Trigger: GTGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCAAGTAAGACTCAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR GCA 72 bp TTCTCCCCATCCAAATTAGGTCTGTTGAGTCTTACTTaGAGTACCGGCGCAGTACATGAACATGTCAACATA +
Preference number: 3 (lower is better)
Translates to: FSPSKLGLLSLT*STGAVHEHVNI
Trigger: TATGTTGACATGTTCATGTACTGCGCCGGTACTGCAAGTAAGACTCAACAGACCTAATTTGGATGGGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp TCAATACCATCTGATTCCTATTTCTTTGCATGGAACCTAATTTTTCTCCTCCCTCTTCTGCTCCCTTCATaGTCTGCTTCCTCCAGGACT +
Preference number: 3 (lower is better)
Translates to: SIPSDSYFFAWNLIFLLPLLLPS*SASSRT
Trigger: AGTCCTGGAGGAAGCAGACAATGAAGGGAGCAGAAG...AGGGAGGAGAAAAATTAGGTTCCATGCAAAGAAATAGGAATCAGATGGTATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
3UTR-3UTR CAA 90 bp TTCACAAGATACATTAAAAGTCCACTAACACCTAACCTAACGCACACAAAACCCCTTGGTGATGCCTTATaGTGGCTGTACAGATCGGGA +
Preference number: 3 (lower is better)
Translates to: FTRYIKSPLTPNLTHTKPLGDAL*WLYRSG
Trigger: TCCCGATCTGTACAGCCACAATAAGGCATCACCAAG...GGGTTTTGTGTGCGTTAGGTTAGGTGTTAGTGGACTTTTAATGTATCTTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR GCA 72 bp GTCTTTTTACACCTCTTTTGTTCACACTATGGGCAGTaGCACTCAGTAAGTTTGGCTCTCTATCTGCTATTC +
Preference number: 3 (lower is better)
Translates to: VFLHLFCSHYGQ*HSVSLALYLLF
Trigger: GAATAGCAGATAGAGAGCCAAACTTACTGAGTGGCACTGCCCATAGTGTGAACAAAAGAGGTGTAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR TCA 72 bp CAGAGACTGGGCTTCAAAAGACACCGTCTTCTATTATaGGTCAAACTTCTTACAAATGAGAACAGAGGCCTA +
Preference number: 3 (lower is better)
Translates to: QRLGFKRHRLLL*VKLLTNENRGL
Trigger: TAGGCCTCTGTTCTCATTTGTAAGAAGTTTGACTCATAATAGAAGACGGTGTCTTTTGAAGCCCAGTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR GCA 72 bp CCATTTTCTAGATCCTTCACTTCTTTGTTCTTGGTTTaGTTCGTCATTTGGTGGAATACATTCCCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: PFSRSFTSLFLV*FVIWWNTFPAA
Trigger: AGCTGCTGGGAATGTATTCCACCAAATGACGAAGCAAACCAAGAACAAAGAAGTGAAGGATCTAGAAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR-3UTR CAA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATAGAACTGGTCTGTAAGTaGTTGGGTTACATCATAAAA +
Preference number: 3 (lower is better)
Translates to: CKSHRSAIPQIKASFPFIELVCK*LGYIIK
Trigger: TTTTATGATGTAACCCAACAACTTACAGACCAGTTC...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR-3UTR CAA 90 bp GTTCAAACATTGAAAGTAATTGATTTCTTCCGAGACACCTCTTTCCTTGGAGACGATCTCTGTCTCAATTaGGAAGCTTTCCTCAAATGT +
Preference number: 3 (lower is better)
Translates to: VQTLKVIDFFRDTSFLGDDLCLN*EAFLKC
Trigger: ACATTTGAGGAAAGCTTCCAAATTGAGACAGAGATC...GTCTCCAAGGAAAGAGGTGTCTCGGAAGAAATCAATTACTTTCAATGTTTGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
3UTR CCA 72 bp CCATCAGCTTTTGGAAGACACTACTTCACTGTATTGTaGTATTCAGTTGTTGCTACTGAAAATCTCAATACC +
Preference number: 3 (lower is better)
Translates to: PSAFGRHYFTVL*YSVVATENLNT
Trigger: GGTATTGAGATTTTCAGTAGCAACAACTGAATACCACAATACAGTGAAGTAGTGTCTTCCAAAAGCTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR-3UTR CAA 90 bp GCAGTTTTTCGAGGTATGACTGAAAAATGCCTTTATTTAGCCTTACACTTGATTGATCTCTGTCTCAATTaGGAAGCTTTCCTCAAATGT +
Preference number: 3 (lower is better)
Translates to: AVFRGMTEKCLYLALHLIDLCLN*EAFLKC
Trigger: ACATTTGAGGAAAGCTTCCAAATTGAGACAGAGATC...AATCAAGTGTAAGGCTAAATAAAGGCATTTTTCAGTCATACCTCGAAAAACTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
3UTR-3UTR CAA 90 bp GCATGTGAGAACGGGCGTGGAAAATTGAAACAATTACGTTTCAAATACTTTTTGGAACTGGTCTGTAAGTaGTTGGGTTACATCATAAAA +
Preference number: 3 (lower is better)
Translates to: ACENGRGKLKQLRFKYFLELVCK*LGYIIK
Trigger: TTTTATGATGTAACCCAACAACTTACAGACCAGTTC...CAAAAAGTATTTGAAACGTAATTGTTTCAATTTTCCACGCCCGTTCTCACATGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR TCA 72 bp CTACTTCACTGTATTGTGGTATTCAGTTGTTGCTACTaGAAATCTCAATACCATCTGATTCCTATTTCTTTG +
Preference number: 3 (lower is better)
Translates to: LLHCIVVFSCCY*KSQYHLIPISL
Trigger: CAAAGAAATAGGAATCAGATGGTATTGAGATTTTCAGTAGCAACAACTGAATACCACAATACAGTGAAGTAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
3UTR TCA 72 bp AAGTTTGGCTCTCTATCTGCTATTCTTTTCATCAACTaGTGCTCTCCCCATTTAATCAGATATTTAAGGATA +
Preference number: 3 (lower is better)
Translates to: KFGSLSAILFIN*CSPHLIRYLRI
Trigger: TATCCTTAAATATCTGATTAAATGGGGAGAGCATCAGTTGATGAAAAGAATAGCAGATAGAGAGCCAAACTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp CCGGTCTGGGCTAGACTGAATGCCCACAAGACCTACTGTGTGGCTGATGCGTGGTCCTCCCGCCGCTGCTaGTGCCGCTGGGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: PVWARLNAHKTYCVADAWSSRRC*CRWDRC
Trigger: GCAGCGGTCCCAGCGGCAGCAGCAGCGGCGGGAGGA...CCACGCATCAGCCACACAGTAGGTCTTGTGGGCATTCAGTCTAGCCCAGACCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
CDS-3UTR TCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGTGCCGATCACAGGTGTaGGTCACTGCGCCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGCRSQV*VTAPGL
Trigger: GAGACCGGGCGCAGTGACTCACACCTGTGATCGGCA...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCTGTCTGCCCAGTCCTaGAGTGCTGGTACAATCAGG +
Preference number: 4 (lower is better)
Translates to: LGARERAPPPVSPSAPAQLSAQS*SAGTIR
Trigger: CCTGATTGTACCAGCACTGCAGGACTGGGCAGACAG...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGTGGAGGGGGCAAGGGTaGATGGAAGGCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: LGARERAPPPVSPSAPAQWRGQG*MEGHKR
Trigger: TCTTTTGTGGCCTTCCATCCACCCTTGCCCCCTCCA...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGGGAAAGTCTGACCGCTaGGGAGGTTGCTCAACGACA +
Preference number: 4 (lower is better)
Translates to: LGARERAPPPVSPSAPAQGKSDR*GGCSTT
Trigger: TGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTCC...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGGCTTCCAGCCTGCTTTaGGTTGGTTATGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: LGARERAPPPVSPSAPAQASSLL*VGYGLG
Trigger: CCCCAATCCATAACCAACTCAAAGCAGGCTGGAAGC...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGGCTAAAGGGGGCATGTaGGAACGGGCGTGGAAAATT +
Preference number: 4 (lower is better)
Translates to: LGARERAPPPVSPSAPAQAKGGM*ERAWKI
Trigger: AATTTTCCACGCCCGTTCTCACATGCCCCCTTTAGC...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGAGCCTAACGGGTTATTaGGGTGTCAGGCTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LGARERAPPPVSPSAPAQSLTGY*GVRLAE
Trigger: CTCAGCTAGCCTGACACCGCAATAACCCGTTAGGCT...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGAGCCCCACTGCCGCTaGCGCGTGTTTCCAATTTGC +
Preference number: 4 (lower is better)
Translates to: LTLGARERAPPPVSPSAPEPHCR*RVFPIC
Trigger: GCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTC...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGGAATACACGACAGATaGTGGGGAGGCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LTLGARERAPPPVSPSAPGIHDR*WGGPGP
Trigger: AGGACCAGGGCCTCCCCAGCATCTGTCGTGTATTCC...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCAGACCGCTGGGGAGGTTaGTCAACGACATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ACTTTSVTERTRTAANQSDRWGG*STTSRC
Trigger: ACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTC...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCAACAGGTGTGAGTCACTaGGCCCGGTCTCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: ACTTTSVTERTRTAANQSTGVSH*ARSPLL
Trigger: AAGCAGTGGAGACCGGGCGCAGTGACTCACACCTGT...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACACAGGGTCTCACTGTTaGCCAGGTGGGAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHTGSHC*PGGSTV
Trigger: CACTGTGCTCCCACCTGGGCAACAGTGAGACCCTGT...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACCGAGTGGCGGCAGTTTaGCGGGGCGTGCAGACACAC +
Preference number: 4 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHRVAAV*RGVQTH
Trigger: GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCG...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCACTCGGCAAGTAGACTaGGGGAGGGCCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LTLGARERAPPPVSPSAPTRQVD*GRASFR
Trigger: CCTAAAGCTGGCCCTCCCCCAGTCTACTTGCCGAGT...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCCAGTCCTGCAGTGCTaGTACAATCAGGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGPVLQC*YNQAVQ
Trigger: CTGCACCGCCTGATTGTACCAGCACTGCAGGACTGG...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACATACACGACAGATGCTaGGGAGGCCCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHIHDRC*GGPGPA
Trigger: AGCAGGACCAGGGCCTCCCCAGCATCTGTCGTGTAT...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACTGGTGGCTGATCATGTaGCAACACTGTGGCACGGCA +
Preference number: 4 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHWWLIM*QHCGTA
Trigger: TGCCGTGCCACAGTGTTGTCACATGATCAGCCACCA...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCTGGTGGCTGATCATGTaGCAACACTGTGGCACGGCA +
Preference number: 4 (lower is better)
Translates to: LTLGARERAPPPVSPSAPWWLIM*QHCGTA
Trigger: TGCCGTGCCACAGTGTTGTCACATGATCAGCCACCA...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGGAACGTGAAGGGTGCTaGCTGGGAGGTCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGEREGC*LGGLCF
Trigger: GAAGCAAAGACCTCCCAGTCAGCACCCTTCACGTTC...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCAGAAGCCTCCTGTCCTTaGGTGACAGTGTGGACACAC +
Preference number: 4 (lower is better)
Translates to: ACTTTSVTERTRTAANQSEASCP*VTVWTH
Trigger: GTGTGTCCACACTGTCACTCAAGGACAGGAGGCTTC...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCACAAGGGAGAGGATCCTaGAAGACCCCATGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ACTTTSVTERTRTAANQSQGRGS*KTPCAQ
Trigger: CTGAGCACATGGGGTCTTTCAGGATCCTCTCCCTTG...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGGGCACTGGAAGCGGTaGTTGTCCAAAGGCCTGATT +
Preference number: 4 (lower is better)
Translates to: LTLGARERAPPPVSPSAPGHWKR*LSKGLI
Trigger: AATCAGGCCTTTGGACAATCACCGCTTCCAGTGCCC...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGGTGTCAGGCTAGCTaGGGTCTAGTGACATGTTCC +
Preference number: 4 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGRCQAS*GLVTCS
Trigger: GGAACATGTCACTAGACCTCAGCTAGCCTGACACCG...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAAGTCAGTTTCTACTaGAGTTCGTCCCCTGACATG +
Preference number: 4 (lower is better)
Translates to: LGARERAPPPVSPSAPAQQVSFY*SSSPDM
Trigger: CATGTCAGGGGACGAACTGCAGTAGAAACTGACTTG...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGGAGCCTCGAATGCGATaGACAGCCGACCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGEPRMR*TADLQI
Trigger: AATCTGCAGGTCGGCTGTGCATCGCATTCGAGGCTC...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGCCTGTTTACCTTCTaGAAGTCGCATCGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGRLFTF*KSHRSA
Trigger: TGCGGACCGATGCGACTTGCAGAAGGTAAACAGGCG...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATCGAGTGGCGGCAGTTTaGCGGGGCGTGCAGACACAC +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYRVAAV*RGVQTH
Trigger: GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCG...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACTTCCGCCATCACAGCTaGAGAGTTGACGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHFRHHS*RVDAQN
Trigger: GTTCTGAGCGTCAACTCTCCAGCTGTGATGGCGGAA...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGACCCCATGTGCTCAGTaGTTTAGTAAATGCCAAACC +
Preference number: 4 (lower is better)
Translates to: LGARERAPPPVSPSAPAQTPCAQ*FSKCQT
Trigger: GGTTTGGCATTTACTAAACCACTGAGCACATGGGGT...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR CAA 72 bp GCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTaGCCGGGGCGTGCAGACACACGACATGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ANQSGSRTSGGS*PGRADTRHVSH
Trigger: ATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGTCAAAGTTCGGTCTGTaGTTTCTTCACCAGTTCGTA +
Preference number: 4 (lower is better)
Translates to: LGARERAPPPVSPSAPAQSKFGL*FLHQFV
Trigger: TACGAACTGGTGAAGAAATCACAGACCGAACTTTGA...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334746.10
ENST00000613725.4
CDS-3UTR TCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACTGCCAAAGGAAAGTCTaGCCGCTGGGGAGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHCQRKV*PLGRLL
Trigger: GAGCAACCTCCCCAGCGGTCAGACTTTCCTTTGGCA...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCAAAATCTGTATTTCTCTaGGCTCCATGGCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: ACTTTSVTERTRTAANQSKSVFL*APWPRD
Trigger: GTCCCTGGGCCATGGAGCTCAGAGAAATACAGATTT...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GCGACATCTCCCAGGCTGTCTCATTGTCAAGAGTGGACTTTCATCCCCAAAACGCATGGAGGTCGGCTTTaGGCCCCACTGCCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: ATSPRLSHCQEWTFIPKTHGGRL*APLPLA
Trigger: CGCCAGCGGCAGTGGGGCTCAAAGCCGACCTCCATG...CGTTTTGGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp CCGGTCTGGGCTAGACTGAATGCCCACAAGACCTACTGTGTGGCTGATGCGTGGTACATTCCCAGCAGCTaGCTGAGTGGGGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PVWARLNAHKTYCVADAWYIPSS*LSGEAG
Trigger: CCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTA...CCACGCATCAGCCACACAGTAGGTCTTGTGGGCATTCAGTCTAGCCCAGACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR GCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGTGTAAAGCTTGTCGGTaGACCCATTTAGAGCCATAT +
Preference number: 4 (lower is better)
Translates to: LGARERAPPPVSPSAPAQCKACR*THLEPY
Trigger: ATATGGCTCTAAATGGGTGCACCGACAAGCTTTACA...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334746.10
ENST00000613725.4
CDS-3UTR GCA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACGGTTGTGTTCGCACTTaGTTCTCAGATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHGCVRT*FSDAAA
Trigger: AGCAGCAGCATCTGAGAAGCAAGTGCGAACACAACC...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCCGCGTGTTTCCAATTTaGCTTCTGCATCGGCACCTT +
Preference number: 4 (lower is better)
Translates to: LTLGARERAPPPVSPSAPRVFPI*LLHRHL
Trigger: AAGGTGCCGATGCAGAAGGCAAATTGGAAACACGCG...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCACGCGTGTTTCCAATTTaGCTTCTGCATCGGCACCTT +
Preference number: 4 (lower is better)
Translates to: ACTTTSVTERTRTAANQSRVFPI*LLHRHL
Trigger: AAGGTGCCGATGCAGAAGGCAAATTGGAAACACGCG...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATGGCTTTGAGCCCCACTaGCGCTGGCGCGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYGFEPH*RWRVFP
Trigger: TGGAAACACGCGCCAGCGGCAGTGGGGCTCAAAGCC...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACACTCGGCAAGTAGACTaGGGGAGGGCCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHTRQVD*GRASFR
Trigger: CCTAAAGCTGGCCCTCCCCCAGTCTACTTGCCGAGT...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACCCAGTCCTGCAGTGCTaGTACAATCAGGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHPVLQC*YNQAVQ
Trigger: CTGCACCGCCTGATTGTACCAGCACTGCAGGACTGG...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGGAGCCCCACTGCCGCTaGCGCGTGTTTCCAATTTGC +
Preference number: 4 (lower is better)
Translates to: TCRLVLTLGARERAPPPVEPHCR*RVFPIC
Trigger: GCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTC...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CTTCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAGGGTTCCCAGCAGCTGCCTaGGTGGGGAAGCAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LRHLVEYIPSSCLSGEAGFPAAA*VGKQGK
Trigger: TTTCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAA...CCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp CCCGGTCTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCATGGAGGTCGGCTTTaGGCCCCACTGCCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: PGLHCFLIPRDAICLEPHHGGRL*APLPLA
Trigger: CGCCAGCGGCAGTGGGGCTCAAAGCCGACCTCCATG...ATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAGACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGCATGGAGGTCGGCTTTaGGCCCCACTGCCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPAHGGRL*APLPLA
Trigger: CGCCAGCGGCAGTGGGGCTCAAAGCCGACCTCCATG...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGTGTAAACATGGTTTCTaGAGGAGGTGTACTGTTTAC +
Preference number: 4 (lower is better)
Translates to: LGARERAPPPVSPSAPAQCKHGF*RRCTVY
Trigger: GTAAACAGTACACCTCCTGCAGAAACCATGTTTACA...CTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCTGCAGGGATTCTGACTaGATCCACACTGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: LTLGARERAPPPVSPSAPCRDSD*IHTVEM
Trigger: CATTTCCACAGTGTGGATGCAGTCAGAATCCCTGCA...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCTCCGAAGTCATGACCTaGGAAAATTCCTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: LTLGARERAPPPVSPSAPSEVMT*ENSSQR
Trigger: CCTCTGTGAGGAATTTTCCCAGGTCATGACTTCGGA...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334746.10
ENST00000613725.4
CDS-3UTR CCA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACGAGGAGACGAGGAACTaGAATTTCGTTGGCTACAAC +
Preference number: 4 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHEETRN*NFVGYN
Trigger: GTTGTAGCCAACGAAATTCCAGTTCCTCGTCTCCTC...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCACAGCCTGCTTTGAGTTaGTTATGGATTGGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: ACTTTSVTERTRTAANQSQPALS*LWIGVA
Trigger: AGCTACCCCAATCCATAACCAACTCAAAGCAGGCTG...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGTAACAGCTTTAGCCTaGGCACAGAAGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LTLGARERAPPPVSPSAPVTALA*AQKAFL
Trigger: GAGAAAAGCCTTCTGTGCCCAGGCTAAAGCTGTTAC...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGTTAGAGCCATATGGATaGGAACTCCACTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGLEPYG*ELHLRM
Trigger: CATCCTCAAGTGGAGTTCTCATCCATATGGCTCTAA...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334746.10
ENST00000613725.4
CDS-3UTR TCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACGCTTCCAGCCTGCTTTaGGTTGGTTATGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHASSLL*VGYGLG
Trigger: CCCCAATCCATAACCAACTCAAAGCAGGCTGGAAGC...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACTCTGCAAGCAGCATTTaGGAAGTCATAGAAATCCGG +
Preference number: 4 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHSASSI*EVIEIR
Trigger: CCGGATTTCTATGACTTCTCAAATGCTGCTTGCAGA...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp ACTTGGAGGTTGCTCTCAGAGGGCAGACTTTTTGTAGAGGAAGTCCGGCTTGCTCTGCAGTTCGTCCCCTaGCATGGGCTGGACCGGTAC +
Preference number: 4 (lower is better)
Translates to: TWRLLSEGRLFVEEVRLALQFVP*HGLDRY
Trigger: GTACCGGTCCAGCCCATGTCAGGGGACGAACTGCAG...AGCAAGCCGGACTTCCTCTACAAAAAGTCTGCCCTCTGAGAGCAACCTCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGGATTGTCCAAAGGCCTaGTTGTCCACGATCTCAAAA +
Preference number: 4 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGDCPKA*LSTISK
Trigger: TTTTGAGATCGTGGACAATCAGGCCTTTGGACAATC...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATCCTCCCGCCGCTGCTaGTGCCGCTGGGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSSSRRC*CRWDRC
Trigger: GCAGCGGTCCCAGCGGCAGCAGCAGCGGCGGGAGGA...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000554565.5
ENST00000613725.4
ENST00000627779.2
CDS-3UTR GCA 90 bp TCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAGGGGATACATTCCCAGCAGCTaGCTGAGTGGGGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSFGGIHSQQLPEWGSRGYIPSS*LSGEAG
Trigger: CCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTA...TCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR GCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATGGAATACACGACAGATaGTGGGGAGGCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYGIHDR*WGGPGP
Trigger: AGGACCAGGGCCTCCCCAGCATCTGTCGTGTATTCC...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GAAAGTCTGACCGCTGGGGAGGTTGCTCAACGACATCCAGGTGTATCGGCTCATGGAATACACGACAGATaGTGGGGAGGCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ESLTAGEVAQRHPGVSAHGIHDR*WGGPGP
Trigger: AGGACCAGGGCCTCCCCAGCATCTGTCGTGTATTCC...ATGAGCCGATACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGAAAAGGAGCCTCGAATaGGATGCACAGCCGACCTGC +
Preference number: 4 (lower is better)
Translates to: TCRLVLTLGARERAPPPVKRSLE*DAQPTC
Trigger: GCAGGTCGGCTGTGCATCGCATTCGAGGCTCCTTTT...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGGTGTGTATGTCTCTGTaGAATACACGACAGATGCTG +
Preference number: 4 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGVCMSL*NTRQML
Trigger: CAGCATCTGTCGTGTATTCCACAGAGACATACACAC...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp TCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAGGGGACGGTCTGGGCTAGACTaGATGCCCACAAGACCTACT +
Preference number: 4 (lower is better)
Translates to: SSFGGIHSQQLPEWGSRGRSGLD*MPTRPT
Trigger: AGTAGGTCTTGTGGGCATTCAGTCTAGCCCAGACCG...TCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACGATGAGAACTCCACTTaGGGATGGCAATTAAGGTAT +
Preference number: 4 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHDENST*GWQLRY
Trigger: ATACCTTAATTGCCATCCTCAAGTGGAGTTCTCATC...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334746.10
ENST00000613725.4
CDS-3UTR TCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGGTGGCACGGCATTATTaGCCATGTAGAGCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: TCRLVLTLGARERAPPPVVARHY*PCRACL
Trigger: CAGACACGCTCTACATGGTCAATAATGCCGTGCCAC...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATGAAGCCTCCTGTCCTTaGGTGACAGTGTGGACACAC +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYEASCP*VTVWTH
Trigger: GTGTGTCCACACTGTCACTCAAGGACAGGAGGCTTC...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTGCCGATCACAGGTGTaGGTCACTGCGCCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPACRSQV*VTAPGL
Trigger: GAGACCGGGCGCAGTGACTCACACCTGTGATCGGCA...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATCAAGGGAGAGGATCCTaGAAGACCCCATGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYQGRGS*KTPCAQ
Trigger: CTGAGCACATGGGGTCTTTCAGGATCCTCTCCCTTG...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATGGGAAGGGTCAGGGATaGGAGTTTTTCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYGKGQG*EFFSPS
Trigger: GGATGGGGAGAAAAACTCTCATCCCTGACCCTTCCC...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATCGGTGTCAGGCTAGCTaGGGTCTAGTGACATGTTCC +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYRCQAS*GLVTCS
Trigger: GGAACATGTCACTAGACCTCAGCTAGCCTGACACCG...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGATCCTCCCGCCGCTGCTaGTGCCGCTGGGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: LGYIIKWDVSHLRHRRLGSSRRC*CRWDRC
Trigger: GCAGCGGTCCCAGCGGCAGCAGCAGCGGCGGGAGGA...TCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000554565.5
ENST00000613725.4
ENST00000627779.2
CDS-3UTR GCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCTGTAAAGCTTGTCGGTaGACCCATTTAGAGCCATAT +
Preference number: 4 (lower is better)
Translates to: LTLGARERAPPPVSPSAPCKACR*THLEPY
Trigger: ATATGGCTCTAAATGGGTGCACCGACAAGCTTTACA...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334746.10
ENST00000613725.4
CDS-3UTR GCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTTGCTTCTCAGATGCTaGTGCTGCTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TCRLVLTLGARERAPPPVLLLRC*CCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAGCATCTGAGAAGCAA...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CCCGGTCTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATGGCTTTGAGCCCCACTaGCGCTGGCGCGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PGLHCFLIPRDAICLEPHGFEPH*RWRVFP
Trigger: TGGAAACACGCGCCAGCGGCAGTGGGGCTCAAAGCC...ATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAGACCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGGGCTTTGAGCCCCACTaGCGCTGGCGCGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPAGFEPH*RWRVFP
Trigger: TGGAAACACGCGCCAGCGGCAGTGGGGCTCAAAGCC...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCAAGGATATCGACATTTTaGAACCTTGAGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: ACTTTSVTERTRTAANQSRISTF*NLESSI
Trigger: AATGGAGGACTCAAGGTTTCAAAATGTCGATATCCT...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334746.10
ENST00000613725.4
CDS-3UTR TCA 90 bp AAGACCTACTGTGTGGCTGATGCGTGGGATCTCCCTTTGCTTCCTTCCCGTGTTGACCTACTGTGTGGCTaGTGCGTGGGATCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: KTYCVADAWDLPLLPSRVDLLCG*CVGSPF
Trigger: AAAGGGAGATCCCACGCATCAGCCACACAGTAGGTC...AACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACAGTAGGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCTGTAGGAAGCATATCTaGTGGAGGAGTACTAATCAA +
Preference number: 4 (lower is better)
Translates to: LTLGARERAPPPVSPSAPCRKHI*WRSTNQ
Trigger: TTGATTAGTACTCCTCCATCAGATATGCTTCCTACA...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGATGTCAGATTATTCCTaGGTGTATATCCACAGGGTA +
Preference number: 4 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGMSDYS*VYIHRV
Trigger: TACCCTGTGGATATACACTCAGGAATAATCTGACAT...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACACACATCAAGGAACATaGCGGCATTCACTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHTHQGT*RHSLLF
Trigger: AAACAAAAGTGAATGCCGTCATGTTCCTTGATGTGT...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGTCCTCCCGCCGCTGCTaGTGCCGCTGGGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWSSRRC*CRWDRC
Trigger: GCAGCGGTCCCAGCGGCAGCAGCAGCGGCGGGAGGA...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000554565.5
ENST00000613725.4
ENST00000627779.2
CDS-3UTR GCA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACATCCTCACAGCCTTGTaGAAGCATGTTAAATTCCAA +
Preference number: 4 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHILTAL*KHVKFQ
Trigger: TTGGAATTTAACATGCTTGCACAAGGCTGTGAGGAT...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334746.10
ENST00000613725.4
CDS-3UTR GCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACTCACACTATGGGCAGTaGCACTCAGTAAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHSHYGQ*HSVSLA
Trigger: AGCCAAACTTACTGAGTGGCACTGCCCATAGTGTGA...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGGGTTGTGTTCGCACTTaGTTCTCAGATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TCRLVLTLGARERAPPPVGCVRT*FSDAAA
Trigger: AGCAGCAGCATCTGAGAAGCAAGTGCGAACACAACC...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACTTTTGTCTGTGTAGATaGCCGTCAGGGGAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHFCLCR*PSGESG
Trigger: TCCACTTTCCCCTGACGGGCATCTACACAGACAAAA...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GCGTGCACCACCACCAGTGTCACCGAGCGCACCCGCACAGCAGCTAACCAGTCACTCTTTTCTTCTAAGTaGTACGGCTGTGTGTTTATG +
Preference number: 4 (lower is better)
Translates to: ACTTTSVTERTRTAANQSLFSSK*YGCVFM
Trigger: CATAAACACACAGCCGTAGCACTTAGAAGAAAAGAG...TGACTGGTTAGCTGCTGTGCGGGTGCGCTCGGTGACACTGGTGGTGGTGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GAGCTACATGCAGAAAGTGAAGGTCTGTTAGGAGTCAGCCCAAAAGTCAAGTCACGAGTGGCGGCAGTTTaGCGGGGCGTGCAGACACAC +
Preference number: 4 (lower is better)
Translates to: ELHAESEGLLGVSPKVKSRVAAV*RGVQTH
Trigger: GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCG...TGACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACTTTCTGCATGTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACCTGTTGAGTCTTACTTaGAGTACCGGCGCAGTACAT +
Preference number: 4 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHLLSLT*STGAVH
Trigger: ATGTACTGCGCCGGTACTGCAAGTAAGACTCAACAG...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCTGGTGGGCTTTGAGCCCCACTaGCGCTGGCGCGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LHCFLIPRDAICLEPHLVGFEPH*RWRVFP
Trigger: TGGAAACACGCGCCAGCGGCAGTGGGGCTCAAAGCC...CACCAGATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGAGCACCCATCACTGCTaGTTTGTCACTCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TCRLVLTLGARERAPPPVSTHHC*FVTPES
Trigger: GCTTTCTGGAGTGACAAAGCAGCAGTGATGGGTGCT...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp AAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACGCTGCTGCTGCCGCTaGGACCGCTGCCGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: KLLGYIIKWDVSHLRHRRRCCCR*DRCRRL
Trigger: GAGGCGACGGCAGCGGTCCCAGCGGCAGCAGCAGCG...TCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000554565.5
ENST00000613725.4
ENST00000627779.2
CDS-3UTR CCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGCGCTGCTGCTGCCGCTaGGACCGCTGCCGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWRCCCR*DRCRRL
Trigger: GAGGCGACGGCAGCGGTCCCAGCGGCAGCAGCAGCG...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000554565.5
ENST00000613725.4
ENST00000627779.2
CDS-3UTR CCA 90 bp TCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAGGGGATGTGTGGCTGATGCGTaGGATCTCCCTTTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSFGGIHSQQLPEWGSRGCVADA*DLPLLP
Trigger: AGGAAGCAAAGGGAGATCCCACGCATCAGCCACACA...TCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR CCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACGAACTGGAATTTCGTTaGCTACAACTGAAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHELEFR*LQLKEG
Trigger: GCCCTCCTTCAGTTGTAGCCAACGAAATTCCAGTTC...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACCAGCCTGCTTTGAGTTaGTTATGGATTGGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHQPALS*LWIGVA
Trigger: AGCTACCCCAATCCATAACCAACTCAAAGCAGGCTG...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp GCTGCTGATCTGCTGGTGGCTGATCATGTGACAACACTGTGGCACGGCATTATTGTTCGTCCCCTGACATaGGCTGGACCGGTACTAGCA +
Preference number: 4 (lower is better)
Translates to: AADLLVADHVTTLWHGIIVRPLT*AGPVLA
Trigger: TGCTAGTACCGGTCCAGCCCATGTCAGGGGACGAAC...AATAATGCCGTGCCACAGTGTTGTCACATGATCAGCCACCAGCAGATCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
3UTR CAA 72 bp CACCGCGATGTCTGGCATCAGATCATTCAGCACAGGTaGTGTTCGCACTTGCTTCTCAGATGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HRDVWHQIIQHR*CSHLLLRCCCC
Trigger: GCAGCAGCAGCATCTGAGAAGCAAGTGCGAACACAACCTGTGCTGAATGATCTGATGCCAGACATCGCGGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp TTGCTTCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCACGGTCTGGGCTAGACTaGATGCCCACAAGACCTACT +
Preference number: 4 (lower is better)
Translates to: LLRHLVEYIPSSCLSGEARSGLD*MPTRPT
Trigger: AGTAGGTCTTGTGGGCATTCAGTCTAGCCCAGACCG...TGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp GCGACATCTCCCAGGCTGTCTCATTGTCAAGAGTGGACTTTCATCCCCAAAACGTCTGAATTTCATAGCTaGCAGTGGCGCCTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: ATSPRLSHCQEWTFIPKTSEFHS*QWRLPR
Trigger: GCGGGGAAGGCGCCACTGTCAGCTATGAAATTCAGA...CGTTTTGGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp CCCGGTCTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATTGCCAAAGGAAAGTCTaGCCGCTGGGGAGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PGLHCFLIPRDAICLEPHCQRKV*PLGRLL
Trigger: GAGCAACCTCCCCAGCGGTCAGACTTTCCTTTGGCA...ATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAGACCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACCTGCAGTTCGTCCCCTaGCATGGGCTGGACCGGTAC +
Preference number: 4 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHLQFVP*HGLDRY
Trigger: GTACCGGTCCAGCCCATGTCAGGGGACGAACTGCAG...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATAATGTGCAGGGATTCTaGCTGCATCCACACTGTGGA +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYNVQGF*LHPHCG
Trigger: TCCACAGTGTGGATGCAGTCAGAATCCCTGCACATT...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGGAATTTTCAGAAAAATaGATGTGTGGGATCAACAGC +
Preference number: 4 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGEFSEK*MCGINS
Trigger: GCTGTTGATCCCACACATTCATTTTTCTGAAAATTC...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCGAATTTTCAGAAAAATaGATGTGTGGGATCAACAGC +
Preference number: 4 (lower is better)
Translates to: LTLGARERAPPPVSPSAPEFSEK*MCGINS
Trigger: GCTGTTGATCCCACACATTCATTTTTCTGAAAATTC...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GTTTACGCGACATCTCCCAGGCTGTCTCATTGTCAAGAGTGGACTTTCATCCCCGGGCACTGGAAGCGGTaGTTGTCCAAAGGCCTGATT +
Preference number: 4 (lower is better)
Translates to: VYATSPRLSHCQEWTFIPGHWKR*LSKGLI
Trigger: AATCAGGCCTTTGGACAATCACCGCTTCCAGTGCCC...GGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGCGTAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp TCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGCATGGAGGTCGGCTTTaGGCCCCACTGCCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SCETELSAGIDELVCKLLHGGRL*APLPLA
Trigger: CGCCAGCGGCAGTGGGGCTCAAAGCCGACCTCCATG...CAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACACTATGGGCAGTaGCACTCAGTAAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: TCRLVLTLGARERAPPPVSHYGQ*HSVSLA
Trigger: AGCCAAACTTACTGAGTGGCACTGCCCATAGTGTGA...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATAGACGACTTGGAGGTTaGTCTCAGAGGGCAGACTTT +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYRRLGG*SQRADF
Trigger: AAAGTCTGCCCTCTGAGAGCAACCTCCAAGTCGTCT...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAGGGAGCTCGGGAGCGTaGACCACCACCAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSGSSGA*TTTSVT
Trigger: GGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCC...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCGGGAGCTCGGGAGCGTaGACCACCACCAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYIGSSGA*TTTSVT
Trigger: GGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCC...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp ACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGCGTGCAGACACACATGAAGGATGGCAGATaGAATAAAAAGTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: TSQAAERVAAVCRGVQTHMKDGR*NKKFLR
Trigger: CCTCAGAAACTTTTTATTGCATCTGCCATCCTTCAT...GTGTGTCTGCACGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CCTACACAGGCAGTTTTTCGAGGTATGACTGAAAAATGCCTTTATTTAGCCTTACGCTGCTGCTGCCGCTaGGACCGCTGCCGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: PTQAVFRGMTEKCLYLALRCCCR*DRCRRL
Trigger: GAGGCGACGGCAGCGGTCCCAGCGGCAGCAGCAGCG...TAAGGCTAAATAAAGGCATTTTTCAGTCATACCTCGAAAAACTGCCTGTGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
CDS-3UTR CCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACCATGTGACAACACTGTaGCACGGCATTATTGACCAT +
Preference number: 4 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHHVTTL*HGIIDH
Trigger: ATGGTCAATAATGCCGTGCCACAGTGTTGTCACATG...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGGAGGAGACGAGGAACTaGAATTTCGTTGGCTACAAC +
Preference number: 4 (lower is better)
Translates to: TCRLVLTLGARERAPPPVEETRN*NFVGYN
Trigger: GTTGTAGCCAACGAAATTCCAGTTCCTCGTCTCCTC...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGCTTCAGGACCCTGACTaGACTCCCGCTGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPALQDPD*TPAGGM
Trigger: CATTCCTCCAGCGGGAGTCCAGTCAGGGTCCTGAAG...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAAGGCAGCAGAACGAGTaGCGGCAGTTTGCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSRQQNE*RQFAGA
Trigger: CGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCT...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR CAA 72 bp CAGCAAGCAGTCAGTTCCGCCATCACAGCTGGAGAGTaGACGCTCAGAACCAGAAATTCTGTCAGTGTGACC +
Preference number: 4 (lower is better)
Translates to: QQAVSSAITAGE*TLRTRNSVSVT
Trigger: GGTCACACTGACAGAATTTCTGGTTCTGAGCGTCAACTCTCCAGCTGTGATGGCGGAACTGACTGCTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR CAA 72 bp TGGCATCAGATCATTCAGCACAGGTTGTGTTCGCACTaGCTTCTCAGATGCTGCTGCTGCTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: WHQIIQHRLCSH*LLRCCCCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAGCATCTGAGAAGCAAGTGCGAACACAACCTGTGCTGAATGATCTGATGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp CTGGCATCAGATCATTCAGCACAGGTTGTGTTCGCACTTGCTTCTCAGATGCTGGAACGTGAAGGGTGCTaGCTGGGAGGTCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LASDHSAQVVFALASQMLEREGC*LGGLCF
Trigger: GAAGCAAAGACCTCCCAGTCAGCACCCTTCACGTTC...CAGCATCTGAGAAGCAAGTGCGAACACAACCTGTGCTGAATGATCTGATGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCACTGCAGTTCGTCCCCTaGCATGGGCTGGACCGGTAC +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSLQFVP*HGLDRY
Trigger: GTACCGGTCCAGCCCATGTCAGGGGACGAACTGCAG...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp CTGGCATCAGATCATTCAGCACAGGTTGTGTTCGCACTTGCTTCTCAGATGCTGGTCCGGCTTGCTTGGTaGCCTCCTTCCTCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: LASDHSAQVVFALASQMLVRLAW*PPSSAY
Trigger: ATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGAC...CAGCATCTGAGAAGCAAGTGCGAACACAACCTGTGCTGAATGATCTGATGCCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGCTGGTCTTGAACTCCTaGGCTTCAGTGATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPALVLNS*ASVICP
Trigger: CGGGCAGATCACTGAAGCTCAGGAGTTCAAGACCAG...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATGAGGCATGTAGCTCTTaGACCTACCCTAGTAACCAT +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYEACSS*TYPSNH
Trigger: ATGGTTACTAGGGTAGGTTCAAGAGCTACATGCCTC...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TCAATACCATCTGATTCCTATTTCTTTGCATGGAACCTAATTTTTCTCCTCCCTTCCTCCCGCCGCTGCTaGTGCCGCTGGGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: SIPSDSYFFAWNLIFLLPSSRRC*CRWDRC
Trigger: GCAGCGGTCCCAGCGGCAGCAGCAGCGGCGGGAGGA...AGGGAGGAGAAAAATTAGGTTCCATGCAAAGAAATAGGAATCAGATGGTATTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
CDS-3UTR GCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATACAGCCACCGTCTGTCTaGCCAGTCCTGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CKSHRSAIPQIKASFPFIQPPSV*PVLQCW
Trigger: CCAGCACTGCAGGACTGGGCAGACAGACGGTGGCTG...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACCAGCCACCGTCTGTCTaGCCAGTCCTGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ETELSAGIDELVCKLLGYQPPSV*PVLQCW
Trigger: CCAGCACTGCAGGACTGGGCAGACAGACGGTGGCTG...GTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CGCACAGCAGCTAACCAGTCAGGCAGCAGAACGAGTGGCGGCAGTTTGCCGGGGAAATACATCTTAGTGTaGAATCCAATGCACATGGAT +
Preference number: 4 (lower is better)
Translates to: RTAANQSGSRTSGGSLPGKYILV*NPMHMD
Trigger: ATCCATGTGCATTGGATTGCACACTAAGATGTATTT...CCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCTGACTGGTTAGCTGCTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GAAAGTCTGACCGCTGGGGAGGTTGCTCAACGACATCCAGGTGTATCGGCTCATTGCAGGGATTCTGACTaGATCCACACTGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: ESLTAGEVAQRHPGVSAHCRDSD*IHTVEM
Trigger: CATTTCCACAGTGTGGATGCAGTCAGAATCCCTGCA...ATGAGCCGATACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp CCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCCCAGTGGAGTTCAAGCAGTTTGCCGGGGCGTaGAGACACACGACATGTTTC +
Preference number: 4 (lower is better)
Translates to: PCAQWFSKCQTSVPVEFKQFAGA*RHTTCF
Trigger: GAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTG...CTTGAACTCCACTGGGACGCTGGTTTGGCATTTACTAAACCACTGAGCACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGAAAAGGAGCCTCGAATaGGATGCACAGCCGACCTGC +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPAKRSLE*DAQPTC
Trigger: GCAGGTCGGCTGTGCATCGCATTCGAGGCTCCTTTT...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATCTGTTGAGTCTTACTTaGAGTACCGGCGCAGTACAT +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYLLSLT*STGAVH
Trigger: ATGTACTGCGCCGGTACTGCAAGTAAGACTCAACAG...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp AAAACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGCGCTGCTGCTGCCGCTaGGACCGCTGCCGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: KTRTKSCETELSAGIDELRCCCR*DRCRRL
Trigger: GAGGCGACGGCAGCGGTCCCAGCGGCAGCAGCAGCG...CAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000554565.5
ENST00000613725.4
ENST00000627779.2
CDS-3UTR CCA 90 bp TTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGTCACCGAGCGCACCCTACATCAAGGGAATTTaGTGTTCCAAATTCTTCACT +
Preference number: 4 (lower is better)
Translates to: LTLGARERAPPPVSPSAPYIKGI*CSKFFT
Trigger: AGTGAAGAATTTGGAACACCAAATTCCCTTGATGTA...GGGTGCGCTCGGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334746.10
ENST00000613725.4
CDS-3UTR CCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGGAAGGAGGGCTTGACTaGTTGCTGCTGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPAEGGLD*LLLICW
Trigger: CCAGCAGATCAGCAGCAACCAGTCAAGCCCTCCTTC...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGGTGAAGGGTGCTGACTaGGAGGTCTTTGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPAVKGAD*EVFASS
Trigger: GCTGGAAGCAAAGACCTCCCAGTCAGCACCCTTCAC...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGGGAAAGTCTGACCGCTaGGGAGGTTGCTCAACGACA +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPAGKSDR*GGCSTT
Trigger: TGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTCC...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCGTTCGTCCCCTGACATaGGCTGGACCGGTACTAGCA +
Preference number: 4 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCVRPLT*AGPVLA
Trigger: TGCTAGTACCGGTCCAGCCCATGTCAGGGGACGAAC...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp ACTTTTTGTAGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTGCTTATTGGTTCGTCCCCTGACATaGGCTGGACCGGTACTAGCA +
Preference number: 4 (lower is better)
Translates to: TFCRGSPACLVTSFLCLLVRPLT*AGPVLA
Trigger: TGCTAGTACCGGTCCAGCCCATGTCAGGGGACGAAC...CAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR CCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACAAGGCAGCAGAACGAGTaGCGGCAGTTTGCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTRQQNE*RQFAGA
Trigger: CGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCT...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACGAGCCCCACTGCCGCTaGCGCGTGTTTCCAATTTGC +
Preference number: 4 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHEPHCR*RVFPIC
Trigger: GCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTC...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp TGTGTGGCTGATGCGTGGGATCTCCCTTTGCTTCCTTCCCGTGTTGGAGCCCATTCAAAGTTCGGTCTGTaGTTTCTTCACCAGTTCGTA +
Preference number: 4 (lower is better)
Translates to: CVADAWDLPLLPSRVGAHSKFGL*FLHQFV
Trigger: TACGAACTGGTGAAGAAATCACAGACCGAACTTTGA...ATGGGCTCCAACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp CTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCTGGTGGAACGTGAAGGGTGCTaGCTGGGAGGTCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LHCFLIPRDAICLEPHLVEREGC*LGGLCF
Trigger: GAAGCAAAGACCTCCCAGTCAGCACCCTTCACGTTC...CACCAGATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACATGCCAAAGGAAAGTCTaGCCGCTGGGGAGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTCQRKV*PLGRLL
Trigger: GAGCAACCTCCCCAGCGGTCAGACTTTCCTTTGGCA...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACACTGCAGTTCGTCCCCTaGCATGGGCTGGACCGGTAC +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTLQFVP*HGLDRY
Trigger: GTACCGGTCCAGCCCATGTCAGGGGACGAACTGCAG...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGCTGCAGTTCGTCCCCTaGCATGGGCTGGACCGGTAC +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLLQFVP*HGLDRY
Trigger: GTACCGGTCCAGCCCATGTCAGGGGACGAACTGCAG...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp TCAGAAACTGACTGGCTTAATTCTGTGTCTACAGCAAGCTCTGGAAGCCTCCTGGTCCGGCTTGCTTGGTaGCCTCCTTCCTCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: SETDWLNSVSTASSGSLLVRLAW*PPSSAY
Trigger: ATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGAC...CAGGAGGCTTCCAGAGCTTGCTGTAGACACAGAATTAAGCCAGTCAGTTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACGAGCGGGAAGATCTCTaGACTAAAACAATTACTGAA +
Preference number: 4 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHEREDL*TKTITE
Trigger: TTCAGTAATTGTTTTAGTTCAGAGATCTTCCCGCTC...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCACAAACTTCAGGACCCTaGCTGGACTCCCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSQTSGP*LDSRWR
Trigger: CCTCCAGCGGGAGTCCAGTCAGGGTCCTGAAGTTTG...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp TTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGATGCCGATCACAGGTGTaGGTCACTGCGCCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: LGYIIKWDVSHLRHRRLGCRSQV*VTAPGL
Trigger: GAGACCGGGCGCAGTGACTCACACCTGTGATCGGCA...TCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp TCAGAAACTGACTGGCTTAATTCTGTGTCTACAGCAAGCTCTGGAAGCCTCCTGCAAGGGAGAGGATCCTaGAAGACCCCATGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SETDWLNSVSTASSGSLLQGRGS*KTPCAQ
Trigger: CTGAGCACATGGGGTCTTTCAGGATCCTCTCCCTTG...CAGGAGGCTTCCAGAGCTTGCTGTAGACACAGAATTAAGCCAGTCAGTTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp TTTGAGCCCCACTGCCGCTGGCGCGTGTTTCCAATTTGCCTTCTGCATCGGCACACACATCAAGGAACATaGCGGCATTCACTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: FEPHCRWRVFPICLLHRHTHQGT*RHSLLF
Trigger: AAACAAAAGTGAATGCCGTCATGTTCCTTGATGTGT...GTGCCGATGCAGAAGGCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GCGTGTTTCCAATTTGCCTTCTGCATCGGCACCTTAATGCAGATGTACAAGGACGTGTGCCGCAGTTCCTaGAGTCGTCTGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: ACFQFAFCIGTLMQMYKDVCRSS*SRLTMS
Trigger: AGACATGGTCAGACGACTGCAGGAACTGCGGCACAC...GTCCTTGTACATCTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAAACACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACTGCACCTGCTCCGTGTaGCGCAGTTCCTGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: ETELSAGIDELVCKLLGYCTCSV*RSSCSR
Trigger: ACGACTGCAGGAACTGCGGCACACGGAGCAGGTGCA...GTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GCGTGTTTCCAATTTGCCTTCTGCATCGGCACCTTAATGCAGATGTACAAGGACCTGTCTGCCCAGTCCTaGAGTGCTGGTACAATCAGG +
Preference number: 4 (lower is better)
Translates to: ACFQFAFCIGTLMQMYKDLSAQS*SAGTIR
Trigger: CCTGATTGTACCAGCACTGCAGGACTGGGCAGACAG...GTCCTTGTACATCTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAAACACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGCAGCCACCGTCTGTCTaGCCAGTCCTGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLQPPSV*PVLQCW
Trigger: CCAGCACTGCAGGACTGGGCAGACAGACGGTGGCTG...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CCCGGTCTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCTTCTCAGATGCTGCTaGTGCTGCTGCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PGLHCFLIPRDAICLEPHLLRCC*CCCCCC
Trigger: ACAGCAACAGCAGCAGCAGCAGCAGCATCTGAGAAG...ATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAGACCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACGACCGCTGGGGAGGTTaGTCAACGACATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHDRWGG*STTSRC
Trigger: ACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTC...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TCAGAAACTGACTGGCTTAATTCTGTGTCTACAGCAAGCTCTGGAAGCCTCCTGAGAGGAAGTCCGGCTTaGTTGGTGACCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SETDWLNSVSTASSGSLLRGSPA*LVTSFL
Trigger: GAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCT...CAGGAGGCTTCCAGAGCTTGCTGTAGACACAGAATTAAGCCAGTCAGTTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp CCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCCCAGTGGAGTTCAAGGCGCCCGGTCTCCACTaGTTTCTAATTCCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: PCAQWFSKCQTSVPVEFKAPGLH*FLIPRD
Trigger: ATCCCTTGGAATTAGAAAGCAGTGGAGACCGGGCGC...CTTGAACTCCACTGGGACGCTGGTTTGGCATTTACTAAACCACTGAGCACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp ACTTTTTGTAGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTGCTTATTGGTGGGAGCACAGTGGTaGAATCTTGGCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: TFCRGSPACLVTSFLCLLVGAQW*NLGSLQ
Trigger: CTGCAGTGAGCCAAGATTGCACCACTGTGCTCCCAC...CAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp GAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAGGGAGCTCGGGAGCGTaGACCACCACCAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: ELSAGIDELVCKLLGYIIGSSGA*TTTSVT
Trigger: GGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCC...TATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCTGGTGGAGCCTCGAATGCGATaGACAGCCGACCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: LHCFLIPRDAICLEPHLVEPRMR*TADLQI
Trigger: AATCTGCAGGTCGGCTGTGCATCGCATTCGAGGCTC...CACCAGATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGGGACTTGGTACCGCCTaGCCATGTAACCCAGATACA +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPAGLGTA*PCNPDT
Trigger: TGTATCTGGGTTACATGGGCAGGCGGTACCAAGTCC...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp ACTTCACTGTATTGTGGTATTCAGTTGTTGCTACTGAAAATCTCAATACCATCTCGCTGCTGCTGCCGCTaGGACCGCTGCCGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: TSLYCGIQLLLLKISIPSRCCCR*DRCRRL
Trigger: GAGGCGACGGCAGCGGTCCCAGCGGCAGCAGCAGCG...AGATGGTATTGAGATTTTCAGTAGCAACAACTGAATACCACAATACAGTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
CDS-3UTR CCA 90 bp TCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAGGGGATGCTTCGTCATTTGGTaGAATACATTCCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSFGGIHSQQLPEWGSRGCFVIW*NTFPAA
Trigger: AGCTGCTGGGAATGTATTCCACCAAATGACGAAGCA...TCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR CCA 90 bp TTGCTTCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAGCTTCCTTCCCGTGTTaGAGCCCATTTTCTAGATCC +
Preference number: 4 (lower is better)
Translates to: LLRHLVEYIPSSCLSGEAASFPC*SPFSRS
Trigger: GGATCTAGAAAATGGGCTCCAACACGGGAAGGAAGC...TGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR CCA 90 bp CCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCCCAGTGGAGTTCAAGACCCACCGCGATGTCTaGCATCAGATCATTCAGCAC +
Preference number: 4 (lower is better)
Translates to: PCAQWFSKCQTSVPVEFKTHRDV*HQIIQH
Trigger: GTGCTGAATGATCTGATGCCAGACATCGCGGTGGGT...CTTGAACTCCACTGGGACGCTGGTTTGGCATTTACTAAACCACTGAGCACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp GAAAGTCTGACCGCTGGGGAGGTTGCTCAACGACATCCAGGTGTATCGGCTCATGTGTGTATGTCTCTGTaGAATACACGACAGATGCTG +
Preference number: 4 (lower is better)
Translates to: ESLTAGEVAQRHPGVSAHVCMSL*NTRQML
Trigger: CAGCATCTGTCGTGTATTCCACAGAGACATACACAC...ATGAGCCGATACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR CCA 90 bp CCCGGTCTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATTCCCCTGACATGGGCTaGACCGGTACTAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: PGLHCFLIPRDAICLEPHSPDMG*TGTSIF
Trigger: GAAAATGCTAGTACCGGTCCAGCCCATGTCAGGGGA...ATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAGACCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAGAGCCCCACTGCCGCTaGCGCGTGTTTCCAATTTGC +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSEPHCR*RVFPIC
Trigger: GCAAATTGGAAACACGCGCCAGCGGCAGTGGGGCTC...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CCCGGTCTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCTAGAGAATGATGCATaGAGGTCGGCTTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PGLHCFLIPRDAICLEPHLENDA*RSALSP
Trigger: GGGGCTCAAAGCCGACCTCCATGCATCATTCTCTAG...ATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAGACCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGCTAGAGAATGATGCATaGAGGTCGGCTTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPALENDA*RSALSP
Trigger: GGGGCTCAAAGCCGACCTCCATGCATCATTCTCTAG...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR CAA 72 bp AAGACCTACTGTGTGGCTGATGCGTGGGATCTCCCTTaGCTTCCTTCCCGTGTTGGAGCCCATTTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: KTYCVADAWDLP*LPSRVGAHFLD
Trigger: ATCTAGAAAATGGGCTCCAACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACAGTAGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp TGGCTGATGCGTGGGATCTCCCTTTGCTTCCTTCCCGTGTTGGAGCCCATTTTCTCAAAGTTCGGTCTGTaGTTTCTTCACCAGTTCGTA +
Preference number: 4 (lower is better)
Translates to: WLMRGISLCFLPVLEPIFSKFGL*FLHQFV
Trigger: TACGAACTGGTGAAGAAATCACAGACCGAACTTTGA...GAAAATGGGCTCCAACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp CTTCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAGGGTCAAAGTTCGGTCTGTaGTTTCTTCACCAGTTCGTA +
Preference number: 4 (lower is better)
Translates to: LRHLVEYIPSSCLSGEAGSKFGL*FLHQFV
Trigger: TACGAACTGGTGAAGAAATCACAGACCGAACTTTGA...CCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp TGCTCCCTTCATTGTCTGCTTCCTCCAGGACTTTGTTCTTTTTGCTCTGATCTCCGGTCTGGGCTAGACTaGATGCCCACAAGACCTACT +
Preference number: 4 (lower is better)
Translates to: CSLHCLLPPGLCSFCSDLRSGLD*MPTRPT
Trigger: AGTAGGTCTTGTGGGCATTCAGTCTAGCCCAGACCG...GAGATCAGAGCAAAAAGAACAAAGTCCTGGAGGAAGCAGACAATGAAGGGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
CDS-3UTR TCA 90 bp GCGACATCTCCCAGGCTGTCTCATTGTCAAGAGTGGACTTTCATCCCCAAAACGAAGAAAGGATCTCTCTaGGCTCTTCCATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ATSPRLSHCQEWTFIPKTKKGSL*ALPCPG
Trigger: ACCTGGACATGGAAGAGCTCAGAGAGATCCTTTCTT...CGTTTTGGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCGTGGCACGGCATTATTaGCCATGTAGAGCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCVARHY*PCRACL
Trigger: CAGACACGCTCTACATGGTCAATAATGCCGTGCCAC...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GAGCTACATGCAGAAAGTGAAGGTCTGTTAGGAGTCAGCCCAAAAGTCAAGTCATCTGAATTTCATAGCTaGCAGTGGCGCCTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: ELHAESEGLLGVSPKVKSSEFHS*QWRLPR
Trigger: GCGGGGAAGGCGCCACTGTCAGCTATGAAATTCAGA...TGACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACTTTCTGCATGTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp GAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACTGCCAAAGGAAAGTCTaGCCGCTGGGGAGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: ETELSAGIDELVCKLLGYCQRKV*PLGRLL
Trigger: GAGCAACCTCCCCAGCGGTCAGACTTTCCTTTGGCA...GTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATATGCCAAAGGAAAGTCTaGCCGCTGGGGAGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: CKSHRSAIPQIKASFPFICQRKV*PLGRLL
Trigger: GAGCAACCTCCCCAGCGGTCAGACTTTCCTTTGGCA...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GTCTGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACCTGCAGTTCGTCCCCTaGCATGGGCTGGACCGGTAC +
Preference number: 4 (lower is better)
Translates to: VCKLLGYIIKWDVSHLRHLQFVP*HGLDRY
Trigger: GTACCGGTCCAGCCCATGTCAGGGGACGAACTGCAG...GTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp GTTTACGCGACATCTCCCAGGCTGTCTCATTGTCAAGAGTGGACTTTCATCCCCGCTACATGCAGAAAGTaGAGGTCTGTTAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: VYATSPRLSHCQEWTFIPATCRK*RSVRSQ
Trigger: CTGACTCCTAACAGACCTTCACTTTCTGCATGTAGC...GGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGCGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACGTCCGGCTTGCTTGGTaGCCTCCTTCCTCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHVRLAW*PPSSAY
Trigger: ATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGAC...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGAATGTGCAGGGATTCTaGCTGCATCCACACTGTGGA +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPANVQGF*LHPHCG
Trigger: TCCACAGTGTGGATGCAGTCAGAATCCCTGCACATT...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp ACCTGCAGATTAGTGTTAACTCTGGGAGCTCGGGAGCGTGCACCACCACCAGTGAGAAATCAGCGTTGTTaGCACCCAATAGAAAACCTA +
Preference number: 4 (lower is better)
Translates to: TCRLVLTLGARERAPPPVRNQRC*HPIENL
Trigger: TAGGTTTTCTATTGGGTGTCAACAACGCTGATTTCT...CACTGGTGGTGGTGCACGCTCCCGAGCTCCCAGAGTTAACACTAATCTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACAGGGAAGGGTCAGGGATaGGAGTTTTTCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTGKGQG*EFFSPS
Trigger: GGATGGGGAGAAAAACTCTCATCCCTGACCCTTCCC...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GCTGCTGATCTGCTGGTGGCTGATCATGTGACAACACTGTGGCACGGCATTATTGAGGCATGTAGCTCTTaGACCTACCCTAGTAACCAT +
Preference number: 4 (lower is better)
Translates to: AADLLVADHVTTLWHGIIEACSS*TYPSNH
Trigger: ATGGTTACTAGGGTAGGTTCAAGAGCTACATGCCTC...AATAATGCCGTGCCACAGTGTTGTCACATGATCAGCCACCAGCAGATCAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACGGGCACTGGAAGCGGTaGTTGTCCAAAGGCCTGATT +
Preference number: 4 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHGHWKR*LSKGLI
Trigger: AATCAGGCCTTTGGACAATCACCGCTTCCAGTGCCC...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCTGGTGGCTAAAGGGGGCATGTaGGAACGGGCGTGGAAAATT +
Preference number: 4 (lower is better)
Translates to: LHCFLIPRDAICLEPHLVAKGGM*ERAWKI
Trigger: AATTTTCCACGCCCGTTCTCACATGCCCCCTTTAGC...CACCAGATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACAGTGTGCCGCAGTTCCTaGAGTCGTCTGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTVCRSS*SRLTMS
Trigger: AGACATGGTCAGACGACTGCAGGAACTGCGGCACAC...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGTGCACCTGCTCCGTGTaGCGCAGTTCCTGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLCTCSV*RSSCSR
Trigger: ACGACTGCAGGAACTGCGGCACACGGAGCAGGTGCA...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGATGCACCTGCTCCGTGTaGCGCAGTTCCTGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: LGYIIKWDVSHLRHRRLGCTCSV*RSSCSR
Trigger: ACGACTGCAGGAACTGCGGCACACGGAGCAGGTGCA...TCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATGCACCTGCTCCGTGTaGCGCAGTTCCTGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTCTCSV*RSSCSR
Trigger: ACGACTGCAGGAACTGCGGCACACGGAGCAGGTGCA...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCGGTACAATCAGGCGGTaGAGCTTTCACACTCGGCAA +
Preference number: 4 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCGTIRR*SFHTRQ
Trigger: TTGCCGAGTGTGAAAGCTGCACCGCCTGATTGTACC...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp ACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCCAGCCACCGTCTGTCTaGCCAGTCCTGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TRTKSCETELSAGIDELVQPPSV*PVLQCW
Trigger: CCAGCACTGCAGGACTGGGCAGACAGACGGTGGCTG...GACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATACAGCCACCGTCTGTCTaGCCAGTCCTGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ELSAGIDELVCKLLGYIIQPPSV*PVLQCW
Trigger: CCAGCACTGCAGGACTGGGCAGACAGACGGTGGCTG...TATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCTGGTGTTGCTTCTCAGATGCTaGTGCTGCTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LHCFLIPRDAICLEPHLVLLLRC*CCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAGCATCTGAGAAGCAA...CACCAGATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CTGGCATCAGATCATTCAGCACAGGTTGTGTTCGCACTTGCTTCTCAGATGCTGGGTTGTGTTCGCACTTaGTTCTCAGATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LASDHSAQVVFALASQMLGCVRT*FSDAAA
Trigger: AGCAGCAGCATCTGAGAAGCAAGTGCGAACACAACC...CAGCATCTGAGAAGCAAGTGCGAACACAACCTGTGCTGAATGATCTGATGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp CATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGACCGCTGGGGAGGTTaGTCAACGACATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: HVKPSYQLALMNWSVSCWDRWGG*STTSRC
Trigger: ACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTC...CCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCGCGCCCGGTCTCCACTaGTTTCTAATTCCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCAPGLH*FLIPRD
Trigger: ATCCCTTGGAATTAGAAAGCAGTGGAGACCGGGCGC...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCACAGGGTCTCACTGTTaGCCAGGTGGGAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYITGSHC*PGGSTV
Trigger: CACTGTGCTCCCACCTGGGCAACAGTGAGACCCTGT...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GAGCTACATGCAGAAAGTGAAGGTCTGTTAGGAGTCAGCCCAAAAGTCAAGTCAGAGCCTCGAATGCGATaGACAGCCGACCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: ELHAESEGLLGVSPKVKSEPRMR*TADLQI
Trigger: AATCTGCAGGTCGGCTGTGCATCGCATTCGAGGCTC...TGACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACTTTCTGCATGTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACAAAAAGGAGCCTCGAATaGGATGCACAGCCGACCTGC +
Preference number: 4 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTKRSLE*DAQPTC
Trigger: GCAGGTCGGCTGTGCATCGCATTCGAGGCTCCTTTT...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACCGCCTGTTTACCTTCTaGAAGTCGCATCGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHRLFTF*KSHRSA
Trigger: TGCGGACCGATGCGACTTGCAGAAGGTAAACAGGCG...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCGGACTTGGTACCGCCTaGCCATGTAACCCAGATACA +
Preference number: 4 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCGLGTA*PCNPDT
Trigger: TGTATCTGGGTTACATGGGCAGGCGGTACCAAGTCC...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TGTGTGGCTGATGCGTGGGATCTCCCTTTGCTTCCTTCCCGTGTTGGAGCCCATTGGAAGGCAAGCTTGTaGAAGCATGTTAAATTCCAA +
Preference number: 4 (lower is better)
Translates to: CVADAWDLPLLPSRVGAHWKASL*KHVKFQ
Trigger: TTGGAATTTAACATGCTTGCACAAGCTTGCCTTCCA...ATGGGCTCCAACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555525.1
ENST00000625801.1
CDS-3UTR CCA 90 bp GAAAGTCTGACCGCTGGGGAGGTTGCTCAACGACATCCAGGTGTATCGGCTCATTCTCATTGTCAAGAGTaGACTTTCATCCCCAAAACG +
Preference number: 4 (lower is better)
Translates to: ESLTAGEVAQRHPGVSAHSHCQE*TFIPKT
Trigger: CGTTTTGGGGATGAAAGTCCACTCTTGACAATGAGA...ATGAGCCGATACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR CCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCACTCGGCAAGTAGACTaGGGGAGGGCCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYITRQVD*GRASFR
Trigger: CCTAAAGCTGGCCCTCCCCCAGTCTACTTGCCGAGT...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp CATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGACTCGGCAAGTAGACTaGGGGAGGGCCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: HVKPSYQLALMNWSVSCWTRQVD*GRASFR
Trigger: CCTAAAGCTGGCCCTCCCCCAGTCTACTTGCCGAGT...CCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp ACTTTTTGTAGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTGCTTATTGACCCACCGCGATGTCTaGCATCAGATCATTCAGCAC +
Preference number: 4 (lower is better)
Translates to: TFCRGSPACLVTSFLCLLTHRDV*HQIIQH
Trigger: GTGCTGAATGATCTGATGCCAGACATCGCGGTGGGT...CAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR CCA 90 bp CATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGATACACGACAGATGCTaGGGAGGCCCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HVKPSYQLALMNWSVSCWIHDRC*GGPGPA
Trigger: AGCAGGACCAGGGCCTCCCCAGCATCTGTCGTGTAT...CCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAATACACGACAGATGCTaGGGAGGCCCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSIHDRC*GGPGPA
Trigger: AGCAGGACCAGGGCCTCCCCAGCATCTGTCGTGTAT...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp CCCGGTCTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATGGTGATGCCTTATTGTaGCTGTACAGATCGGGACCA +
Preference number: 4 (lower is better)
Translates to: PGLHCFLIPRDAICLEPHGDALL*LYRSGP
Trigger: TGGTCCCGATCTGTACAGCCACAATAAGGCATCACC...ATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAGACCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACGGAAAGTCTGACCGCTaGGGAGGTTGCTCAACGACA +
Preference number: 4 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHGKSDR*GGCSTT
Trigger: TGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTCC...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTCGTCCCCTGACATaGGCTGGACCGGTACTAGCA +
Preference number: 4 (lower is better)
Translates to: HVKPSYQLALMNWSVSCWVRPLT*AGPVLA
Trigger: TGCTAGTACCGGTCCAGCCCATGTCAGGGGACGAAC...CCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCACTTCAGGACCCTGACTaGACTCCCGCTGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSLQDPD*TPAGGM
Trigger: CATTCCTCCAGCGGGAGTCCAGTCAGGGTCCTGAAG...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATACTTCAGGACCCTGACTaGACTCCCGCTGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: CKSHRSAIPQIKASFPFILQDPD*TPAGGM
Trigger: CATTCCTCCAGCGGGAGTCCAGTCAGGGTCCTGAAG...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATACTGCATCCACACTGTaGAAATGTAACAGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYTASTL*KCNSFS
Trigger: GCTAAAGCTGTTACATTTCCACAGTGTGGATGCAGT...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp GCGTGTTTCCAATTTGCCTTCTGCATCGGCACCTTAATGCAGATGTACAAGGACTTCCGCCATCACAGCTaGAGAGTTGACGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: ACFQFAFCIGTLMQMYKDFRHHS*RVDAQN
Trigger: GTTCTGAGCGTCAACTCTCCAGCTGTGATGGCGGAA...GTCCTTGTACATCTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAAACACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TTCACAAGATACATTAAAAGTCCACTAACACCTAACCTAACGCACACAAAACCCAGGCAGCAGAACGAGTaGCGGCAGTTTGCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: FTRYIKSPLTPNLTHTKPRQQNE*RQFAGA
Trigger: CGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCT...GGGTTTTGTGTGCGTTAGGTTAGGTGTTAGTGGACTTTTAATGTATCTTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR CAA 72 bp AGAGGGCAGACTTTTTGTAGAGGAAGTCCGGCTTGCTaGGTGACCTCCTTCCTCTGCTTATTGAATCTTCCC +
Preference number: 4 (lower is better)
Translates to: RGQTFCRGSPAC*VTSFLCLLNLP
Trigger: GGGAAGATTCAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGTCTGCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp TCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAGGGGAAGGATATCGACATTTTaGAACCTTGAGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: SSFGGIHSQQLPEWGSRGRISTF*NLESSI
Trigger: AATGGAGGACTCAAGGTTTCAAAATGTCGATATCCT...TCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATATGGTGGCTGATCATGTaGCAACACTGTGGCACGGCA +
Preference number: 4 (lower is better)
Translates to: CKSHRSAIPQIKASFPFIWWLIM*QHCGTA
Trigger: TGCCGTGCCACAGTGTTGTCACATGATCAGCCACCA...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACTCTGAATTTCATAGCTaGCAGTGGCGCCTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: ETELSAGIDELVCKLLGYSEFHS*QWRLPR
Trigger: GCGGGGAAGGCGCCACTGTCAGCTATGAAATTCAGA...GTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp CATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGAACGTGAAGGGTGCTaGCTGGGAGGTCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: HVKPSYQLALMNWSVSCWEREGC*LGGLCF
Trigger: GAAGCAAAGACCTCCCAGTCAGCACCCTTCACGTTC...CCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATGCCAAAGGAAAGTCTaGCCGCTGGGGAGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTCQRKV*PLGRLL
Trigger: GAGCAACCTCCCCAGCGGTCAGACTTTCCTTTGGCA...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp TGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACTGCAGTTCGTCCCCTaGCATGGGCTGGACCGGTAC +
Preference number: 4 (lower is better)
Translates to: CKLLGYIIKWDVSHLRHRLQFVP*HGLDRY
Trigger: GTACCGGTCCAGCCCATGTCAGGGGACGAACTGCAG...TCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGGCTACATGCAGAAAGTaGAGGTCTGTTAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPAATCRK*RSVRSQ
Trigger: CTGACTCCTAACAGACCTTCACTTTCTGCATGTAGC...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCTGGTGAAATCTGTATTTCTCTaGGCTCCATGGCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LHCFLIPRDAICLEPHLVKSVFL*APWPRD
Trigger: GTCCCTGGGCCATGGAGCTCAGAGAAATACAGATTT...CACCAGATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACGTCCGGCTTGCTTGGTaGCCTCCTTCCTCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: ETELSAGIDELVCKLLGYVRLAW*PPSSAY
Trigger: ATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGAC...GTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATGAGCGGGAAGATCTCTaGACTAAAACAATTACTGAA +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYEREDL*TKTITE
Trigger: TTCAGTAATTGTTTTAGTTCAGAGATCTTCCCGCTC...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATACAAACTTCAGGACCCTaGCTGGACTCCCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ELSAGIDELVCKLLGYIIQTSGP*LDSRWR
Trigger: CCTCCAGCGGGAGTCCAGTCAGGGTCCTGAAGTTTG...TATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCAATGTGCAGGGATTCTaGCTGCATCCACACTGTGGA +
Preference number: 4 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCNVQGF*LHPHCG
Trigger: TCCACAGTGTGGATGCAGTCAGAATCCCTGCACATT...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCACTGGTCTTGAACTCCTaGGCTTCAGTGATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSLVLNS*ASVICP
Trigger: CGGGCAGATCACTGAAGCTCAGGAGTTCAAGACCAG...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGCTGGTCTTGAACTCCTaGGCTTCAGTGATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: HVKPSYQLALMNWSVSCWLVLNS*ASVICP
Trigger: CGGGCAGATCACTGAAGCTCAGGAGTTCAAGACCAG...CCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CTGGCATCAGATCATTCAGCACAGGTTGTGTTCGCACTTGCTTCTCAGATGCTGTCACAGCTGGAGAGTTaGCGCTCAGAACCAGAAATT +
Preference number: 4 (lower is better)
Translates to: LASDHSAQVVFALASQMLSQLES*RSEPEI
Trigger: AATTTCTGGTTCTGAGCGTCAACTCTCCAGCTGTGA...CAGCATCTGAGAAGCAAGTGCGAACACAACCTGTGCTGAATGATCTGATGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp GAAAGTCTGACCGCTGGGGAGGTTGCTCAACGACATCCAGGTGTATCGGCTCATATGTCAGATTATTCCTaGGTGTATATCCACAGGGTA +
Preference number: 4 (lower is better)
Translates to: ESLTAGEVAQRHPGVSAHMSDYS*VYIHRV
Trigger: TACCCTGTGGATATACACTCAGGAATAATCTGACAT...ATGAGCCGATACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAGGGCACTGGAAGCGGTaGTTGTCCAAAGGCCTGATT +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSGHWKR*LSKGLI
Trigger: AATCAGGCCTTTGGACAATCACCGCTTCCAGTGCCC...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GAGCTACATGCAGAAAGTGAAGGTCTGTTAGGAGTCAGCCCAAAAGTCAAGTCAGCTAAAGGGGGCATGTaGGAACGGGCGTGGAAAATT +
Preference number: 4 (lower is better)
Translates to: ELHAESEGLLGVSPKVKSAKGGM*ERAWKI
Trigger: AATTTTCCACGCCCGTTCTCACATGCCCCCTTTAGC...TGACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACTTTCTGCATGTAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCACACTATGGGCAGTaGCACTCAGTAAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPASHYGQ*HSVSLA
Trigger: AGCCAAACTTACTGAGTGGCACTGCCCATAGTGTGA...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAGTGTGCCGCAGTTCCTaGAGTCGTCTGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSVCRSS*SRLTMS
Trigger: AGACATGGTCAGACGACTGCAGGAACTGCGGCACAC...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCGTGTGCCGCAGTTCCTaGAGTCGTCTGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYIVCRSS*SRLTMS
Trigger: AGACATGGTCAGACGACTGCAGGAACTGCGGCACAC...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCATTCTGCAACAGCTCTaGAGCAGCATCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCILQQL*SSICKT
Trigger: GGTCTTGCAGATGCTGCTGCAGAGCTGTTGCAGAAT...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCACTGTCTGCCCAGTCCTaGAGTGCTGGTACAATCAGG +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSLSAQS*SAGTIR
Trigger: CCTGATTGTACCAGCACTGCAGGACTGGGCAGACAG...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACCTGTCTGCCCAGTCCTaGAGTGCTGGTACAATCAGG +
Preference number: 4 (lower is better)
Translates to: ETELSAGIDELVCKLLGYLSAQS*SAGTIR
Trigger: CCTGATTGTACCAGCACTGCAGGACTGGGCAGACAG...GTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACAGCCACCGTCTGTCTaGCCAGTCCTGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CKLLGYIIKWDVSHLRHRQPPSV*PVLQCW
Trigger: CCAGCACTGCAGGACTGGGCAGACAGACGGTGGCTG...TCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACACTTCTCAGATGCTGCTaGTGCTGCTGCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTLLRCC*CCCCCC
Trigger: ACAGCAACAGCAGCAGCAGCAGCAGCATCTGAGAAG...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACAGGAATACACGACAGATaGTGGGGAGGCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTGIHDR*WGGPGP
Trigger: AGGACCAGGGCCTCCCCAGCATCTGTCGTGTATTCC...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGGGAATACACGACAGATaGTGGGGAGGCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLGIHDR*WGGPGP
Trigger: AGGACCAGGGCCTCCCCAGCATCTGTCGTGTATTCC...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACACAGGGACTCACTGTCTaGCAGTCTTCTACCGGATCT +
Preference number: 4 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTQGLTV*QSSTGS
Trigger: AGATCCGGTAGAAGACTGGCAGACAGTGAGTCCCTG...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACAGAGGAAGTCCGGCTTaGTTGGTGACCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ETELSAGIDELVCKLLGYRGSPA*LVTSFL
Trigger: GAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCT...GTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATAAGAGGAAGTCCGGCTTaGTTGGTGACCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CKSHRSAIPQIKASFPFIRGSPA*LVTSFL
Trigger: GAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCT...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAAGAGGAAGTCCGGCTTaGTTGGTGACCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSRGSPA*LVTSFL
Trigger: GAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCT...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GCTGCTGATCTGCTGGTGGCTGATCATGTGACAACACTGTGGCACGGCATTATTCTTATGACCAGAATGTaGAGGGATTCTGACTGCATC +
Preference number: 4 (lower is better)
Translates to: AADLLVADHVTTLWHGIILMTRM*RDSDCI
Trigger: GATGCAGTCAGAATCCCTGCACATTCTGGTCATAAG...AATAATGCCGTGCCACAGTGTTGTCACATGATCAGCCACCAGCAGATCAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp TTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAACAGGTGTGAGTCACTaGGCCCGGTCTCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: LGYIIKWDVSHLRHRRLGTGVSH*ARSPLL
Trigger: AAGCAGTGGAGACCGGGCGCAGTGACTCACACCTGT...TCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACGTGGGAGCACAGTGGTaGAATCTTGGCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: ETELSAGIDELVCKLLGYVGAQW*NLGSLQ
Trigger: CTGCAGTGAGCCAAGATTGCACCACTGTGCTCCCAC...GTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCACAGTTTGCCGGGGCGTaGAGACACACGACATGTTTC +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSQFAGA*RHTTCF
Trigger: GAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTG...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATAGAGCCTCGAATGCGATaGACAGCCGACCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: CKSHRSAIPQIKASFPFIEPRMR*TADLQI
Trigger: AATCTGCAGGTCGGCTGTGCATCGCATTCGAGGCTC...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GCGTGTTTCCAATTTGCCTTCTGCATCGGCACCTTAATGCAGATGTACAAGGACCGCGTGTTTCCAATTTaGCTTCTGCATCGGCACCTT +
Preference number: 4 (lower is better)
Translates to: ACFQFAFCIGTLMQMYKDRVFPI*LLHRHL
Trigger: AAGGTGCCGATGCAGAAGGCAAATTGGAAACACGCG...GTCCTTGTACATCTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAAACACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CCGGTCTGGGCTAGACTGAATGCCCACAAGACCTACTGTGTGGCTGATGCGTGGTACATCAAGGGAATTTaGTGTTCCAAATTCTTCACT +
Preference number: 4 (lower is better)
Translates to: PVWARLNAHKTYCVADAWYIKGI*CSKFFT
Trigger: AGTGAAGAATTTGGAACACCAAATTCCCTTGATGTA...CCACGCATCAGCCACACAGTAGGTCTTGTGGGCATTCAGTCTAGCCCAGACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR CCA 90 bp TGTGTGGCTGATGCGTGGGATCTCCCTTTGCTTCCTTCCCGTGTTGGAGCCCATTTTTCCATCAGCTTTTaGAAGACACTACTTCACTGT +
Preference number: 4 (lower is better)
Translates to: CVADAWDLPLLPSRVGAHFSISF*KTLLHC
Trigger: ACAGTGAAGTAGTGTCTTCCAAAAGCTGATGGAAAA...ATGGGCTCCAACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR CCA 90 bp TTGCTTCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCATGCTTCGTCATTTGGTaGAATACATTCCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLRHLVEYIPSSCLSGEACFVIW*NTFPAA
Trigger: AGCTGCTGGGAATGTATTCCACCAAATGACGAAGCA...TGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR CCA 90 bp GTTTACGCGACATCTCCCAGGCTGTCTCATTGTCAAGAGTGGACTTTCATCCCCCTTTTGTTCACACTATaGGCAGTGCCACTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: VYATSPRLSHCQEWTFIPLLFTL*AVPLSK
Trigger: CTTACTGAGTGGCACTGCCCATAGTGTGAACAAAAG...GGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGCGTAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR CCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAGAAGGAGGGCTTGACTaGTTGCTGCTGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSEGGLD*LLLICW
Trigger: CCAGCAGATCAGCAGCAACCAGTCAAGCCCTCCTTC...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCTGGAGGGGGCAAGGGTaGATGGAAGGCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYIWRGQG*MEGHKR
Trigger: TCTTTTGTGGCCTTCCATCCACCCTTGCCCCCTCCA...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAGTGAAGGGTGCTGACTaGGAGGTCTTTGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSVKGAD*EVFASS
Trigger: GCTGGAAGCAAAGACCTCCCAGTCAGCACCCTTCAC...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCGTGAAGGGTGCTGACTaGGAGGTCTTTGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYIVKGAD*EVFASS
Trigger: GCTGGAAGCAAAGACCTCCCAGTCAGCACCCTTCAC...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACAACTCGGCAAGTAGACTaGGGGAGGGCCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTTRQVD*GRASFR
Trigger: CCTAAAGCTGGCCCTCCCCCAGTCTACTTGCCGAGT...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGACCAGTCCTGCAGTGCTaGTACAATCAGGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LGYIIKWDVSHLRHRRLGPVLQC*YNQAVQ
Trigger: CTGCACCGCCTGATTGTACCAGCACTGCAGGACTGG...TCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGCCAGTCCTGCAGTGCTaGTACAATCAGGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLPVLQC*YNQAVQ
Trigger: CTGCACCGCCTGATTGTACCAGCACTGCAGGACTGG...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACACCAGTCCTGCAGTGCTaGTACAATCAGGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTPVLQC*YNQAVQ
Trigger: CTGCACCGCCTGATTGTACCAGCACTGCAGGACTGG...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGATACACGACAGATGCTaGGGAGGCCCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SCETELSAGIDELVCKLLIHDRC*GGPGPA
Trigger: AGCAGGACCAGGGCCTCCCCAGCATCTGTCGTGTAT...CAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAATACACGACAGATGCTaGGGAGGCCCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LGYIIKWDVSHLRHRRLGIHDRC*GGPGPA
Trigger: AGCAGGACCAGGGCCTCCCCAGCATCTGTCGTGTAT...TCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp CATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGGAAAGTCTGACCGCTaGGGAGGTTGCTCAACGACA +
Preference number: 4 (lower is better)
Translates to: HVKPSYQLALMNWSVSCWGKSDR*GGCSTT
Trigger: TGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTCC...CCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp CCCGGTCTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATGGTACTAGCATTTTCTaGGGCTGCCAAAGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: PGLHCFLIPRDAICLEPHGTSIF*GCQRKV
Trigger: GACTTTCCTTTGGCAGCCCCAGAAAATGCTAGTACC...ATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAGACCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGTTCGTCCCCTGACATaGGCTGGACCGGTACTAGCA +
Preference number: 4 (lower is better)
Translates to: SCETELSAGIDELVCKLLVRPLT*AGPVLA
Trigger: TGCTAGTACCGGTCCAGCCCATGTCAGGGGACGAAC...CAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGTTCGTCCCCTGACATaGGCTGGACCGGTACTAGCA +
Preference number: 4 (lower is better)
Translates to: LGYIIKWDVSHLRHRRLGVRPLT*AGPVLA
Trigger: TGCTAGTACCGGTCCAGCCCATGTCAGGGGACGAAC...TCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp AAAACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGAGGCAGCAGAACGAGTaGCGGCAGTTTGCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: KTRTKSCETELSAGIDELRQQNE*RQFAGA
Trigger: CGCCCCGGCAAACTGCCGCCACTCGTTCTGCTGCCT...CAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCCCAGTGGAGTTCAAGAAGACAGACAGAGACTaGGCTTCAAAAGACACCGTC +
Preference number: 4 (lower is better)
Translates to: PCAQWFSKCQTSVPVEFKKTDRD*ASKDTV
Trigger: GACGGTGTCTTTTGAAGCCCAGTCTCTGTCTGTCTT...CTTGAACTCCACTGGGACGCTGGTTTGGCATTTACTAAACCACTGAGCACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CTTCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAGGGTTGTTCTTTTTGCTCTaGTCTCTGTCTCAATTTGGA +
Preference number: 4 (lower is better)
Translates to: LRHLVEYIPSSCLSGEAGLFFLL*SLSQFG
Trigger: TCCAAATTGAGACAGAGATCAGAGCAAAAAGAACAA...CCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp CCTACACAGGCAGTTTTTCGAGGTATGACTGAAAAATGCCTTTATTTAGCCTTATTCCCAGCAGCTGCCTaGGTGGGGAAGCAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PTQAVFRGMTEKCLYLALFPAAA*VGKQGK
Trigger: TTTCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAA...TAAGGCTAAATAAAGGCATTTTTCAGTCATACCTCGAAAAACTGCCTGTGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATATTCTTTTCATCAACTaGTGCTCTCCCCATTTAATC +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYILFIN*CSPHLI
Trigger: GATTAAATGGGGAGAGCATCAGTTGATGAAAAGAAT...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAGTGGCACGGCATTATTaGCCATGTAGAGCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSVARHY*PCRACL
Trigger: CAGACACGCTCTACATGGTCAATAATGCCGTGCCAC...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGTGGTGGCTGATCATGTaGCAACACTGTGGCACGGCA +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLWWLIM*QHCGTA
Trigger: TGCCGTGCCACAGTGTTGTCACATGATCAGCCACCA...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATGGTGGCTGATCATGTaGCAACACTGTGGCACGGCA +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTWWLIM*QHCGTA
Trigger: TGCCGTGCCACAGTGTTGTCACATGATCAGCCACCA...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCGCTTCCAGCCTGCTTTaGGTTGGTTATGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYIASSLL*VGYGLG
Trigger: CCCCAATCCATAACCAACTCAAAGCAGGCTGGAAGC...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAGCTTCCAGCCTGCTTTaGGTTGGTTATGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSASSLL*VGYGLG
Trigger: CCCCAATCCATAACCAACTCAAAGCAGGCTGGAAGC...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp TTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGAAGCCTCCTGTCCTTaGGTGACAGTGTGGACACAC +
Preference number: 4 (lower is better)
Translates to: LGYIIKWDVSHLRHRRLGEASCP*VTVWTH
Trigger: GTGTGTCCACACTGTCACTCAAGGACAGGAGGCTTC...TCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACAGAAGCCTCCTGTCCTTaGGTGACAGTGTGGACACAC +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTEASCP*VTVWTH
Trigger: GTGTGTCCACACTGTCACTCAAGGACAGGAGGCTTC...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCTGCAAGCAGCATTTaGGAAGTCATAGAAATCCGG +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPASASSI*EVIEIR
Trigger: CCGGATTTCTATGACTTCTCAAATGCTGCTTGCAGA...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CCCGGTCTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATTCTGCAAGCAGCATTTaGGAAGTCATAGAAATCCGG +
Preference number: 4 (lower is better)
Translates to: PGLHCFLIPRDAICLEPHSASSI*EVIEIR
Trigger: CCGGATTTCTATGACTTCTCAAATGCTGCTTGCAGA...ATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAGACCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GTCTGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACTGCCAAAGGAAAGTCTaGCCGCTGGGGAGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: VCKLLGYIIKWDVSHLRHCQRKV*PLGRLL
Trigger: GAGCAACCTCCCCAGCGGTCAGACTTTCCTTTGGCA...GTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp TCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGTCCGGCTTGCTTGGTaGCCTCCTTCCTCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: SCETELSAGIDELVCKLLVRLAW*PPSSAY
Trigger: ATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGAC...CAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp GCGTGTTTCCAATTTGCCTTCTGCATCGGCACCTTAATGCAGATGTACAAGGACTCACAGCTGGAGAGTTaGCGCTCAGAACCAGAAATT +
Preference number: 4 (lower is better)
Translates to: ACFQFAFCIGTLMQMYKDSQLES*RSEPEI
Trigger: AATTTCTGGTTCTGAGCGTCAACTCTCCAGCTGTGA...GTCCTTGTACATCTGCATTAAGGTGCCGATGCAGAAGGCAAATTGGAAACACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACAGGGAAGGGTCAGGGATaGGAGTTTTTCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTGKGQG*EFFSPS
Trigger: GGATGGGGAGAAAAACTCTCATCCCTGACCCTTCCC...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp TTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGACGGTGTCAGGCTAGCTaGGGTCTAGTGACATGTTCC +
Preference number: 4 (lower is better)
Translates to: LGYIIKWDVSHLRHRRLGRCQAS*GLVTCS
Trigger: GGAACATGTCACTAGACCTCAGCTAGCCTGACACCG...TCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAGGGGAACTTTAATAGCATCCTaGTTATGTCTCACTGATTCC +
Preference number: 4 (lower is better)
Translates to: SSFGGIHSQQLPEWGSRGTLIAS*LCLTDS
Trigger: GGAATCAGTGAGACATAAGCAGGATGCTATTAAAGT...TCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR GCA 90 bp TGGCTGATGCGTGGGATCTCCCTTTGCTTCCTTCCCGTGTTGGAGCCCATTTTCACTTTAATAGCATCCTaGTTATGTCTCACTGATTCC +
Preference number: 4 (lower is better)
Translates to: WLMRGISLCFLPVLEPIFTLIAS*LCLTDS
Trigger: GGAATCAGTGAGACATAAGCAGGATGCTATTAAAGT...GAAAATGGGCTCCAACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR GCA 90 bp TGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGATGCACCTGCTCCGTGTaGCGCAGTTCCTGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: CKLLGYIIKWDVSHLRHRCTCSV*RSSCSR
Trigger: ACGACTGCAGGAACTGCGGCACACGGAGCAGGTGCA...TCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCGGTACAATCAGGCGGTaGAGCTTTCACACTCGGCAA +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYIGTIRR*SFHTRQ
Trigger: TTGCCGAGTGTGAAAGCTGCACCGCCTGATTGTACC...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGACTGTCTGCCCAGTCCTaGAGTGCTGGTACAATCAGG +
Preference number: 4 (lower is better)
Translates to: LGYIIKWDVSHLRHRRLGLSAQS*SAGTIR
Trigger: CCTGATTGTACCAGCACTGCAGGACTGGGCAGACAG...TCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp AAAACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGCAGCCACCGTCTGTCTaGCCAGTCCTGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KTRTKSCETELSAGIDELQPPSV*PVLQCW
Trigger: CCAGCACTGCAGGACTGGGCAGACAGACGGTGGCTG...CAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGCTTCTCAGATGCTGCTaGTGCTGCTGCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HVKPSYQLALMNWSVSCWLLRCC*CCCCCC
Trigger: ACAGCAACAGCAGCAGCAGCAGCAGCATCTGAGAAG...CCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCTTGCTTCTCAGATGCTaGTGCTGCTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYILLLRC*CCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAGCATCTGAGAAGCAA...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAGGAATACACGACAGATaGTGGGGAGGCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ELSAGIDELVCKLLGYIIGIHDR*WGGPGP
Trigger: AGGACCAGGGCCTCCCCAGCATCTGTCGTGTATTCC...TATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTGGAATACACGACAGATaGTGGGGAGGCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: QNHVKPSYQLALMNWSVSGIHDR*WGGPGP
Trigger: AGGACCAGGGCCTCCCCAGCATCTGTCGTGTATTCC...ACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GTCTGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACGACCGCTGGGGAGGTTaGTCAACGACATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VCKLLGYIIKWDVSHLRHDRWGG*STTSRC
Trigger: ACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTC...GTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAGACCGCTGGGGAGGTTaGTCAACGACATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ELSAGIDELVCKLLGYIIDRWGG*STTSRC
Trigger: ACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTC...TATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTGACCGCTGGGGAGGTTaGTCAACGACATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: QNHVKPSYQLALMNWSVSDRWGG*STTSRC
Trigger: ACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTC...ACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCACAGGGACTCACTGTCTaGCAGTCTTCTACCGGATCT +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSQGLTV*QSSTGS
Trigger: AGATCCGGTAGAAGACTGGCAGACAGTGAGTCCCTG...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGCTTATGACCAGAATGTaGAGGGATTCTGACTGCATC +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPALMTRM*RDSDCI
Trigger: GATGCAGTCAGAATCCCTGCACATTCTGGTCATAAG...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp ACTTTTTGTAGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTGCTTATTGCAGTGGTTTAGTAAATaGCAAACCAGCGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: TFCRGSPACLVTSFLCLLQWFSK*QTSVPV
Trigger: CACTGGGACGCTGGTTTGGCATTTACTAAACCACTG...CAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp AAGCCTCTTTTCATTGCATCACTTAAGACTTCACTGTTTATAGGTAAGATGTGTGGGAGCTCGGGAGCGTaGACCACCACCAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: KPLFIASLKTSLFIGKMCGSSGA*TTTSVT
Trigger: GGTGACACTGGTGGTGGTGCACGCTCCCGAGCTCCC...ACACATCTTACCTATAAACAGTGAAGTCTTAAGTGATGCAATGAAAAGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGCGCCTGTTTACCTTCTaGAAGTCGCATCGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLRLFTF*KSHRSA
Trigger: TGCGGACCGATGCGACTTGCAGAAGGTAAACAGGCG...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GAAAGTCTGACCGCTGGGGAGGTTGCTCAACGACATCCAGGTGTATCGGCTCATTGTTCACTTGCCTTGTaGAAGCATGTTAAATTCCAA +
Preference number: 4 (lower is better)
Translates to: ESLTAGEVAQRHPGVSAHCSLAL*KHVKFQ
Trigger: TTGGAATTTAACATGCTTGCACAAGGCAAGTGAACA...ATGAGCCGATACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp GGCAGTTTGCCGGGGCGTGCAGACACACGACATGTTTCCCATCTTGGAGACTATTGTTCACTTGCCTTGTaGAAGCATGTTAAATTCCAA +
Preference number: 4 (lower is better)
Translates to: GSLPGRADTRHVSHLGDYCSLAL*KHVKFQ
Trigger: TTGGAATTTAACATGCTTGCACAAGGCAAGTGAACA...ATAGTCTCCAAGATGGGAAACATGTCGTGTGTCTGCACGCCCCGGCAAACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR CCA 90 bp TCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAGGGGAATCTCTGTCTCAATTTaGAAGCTTTCCTCAAATGTC +
Preference number: 4 (lower is better)
Translates to: SSFGGIHSQQLPEWGSRGISVSI*KLSSNV
Trigger: GACATTTGAGGAAAGCTTCCAAATTGAGACAGAGAT...TCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR CCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACAGAAGGAGGGCTTGACTaGTTGCTGCTGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTEGGLD*LLLICW
Trigger: CCAGCAGATCAGCAGCAACCAGTCAAGCCCTCCTTC...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGAAGGAGGGCTTGACTaGTTGCTGCTGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SCETELSAGIDELVCKLLEGGLD*LLLICW
Trigger: CCAGCAGATCAGCAGCAACCAGTCAAGCCCTCCTTC...CAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGGAAGGAGGGCTTGACTaGTTGCTGCTGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLEGGLD*LLLICW
Trigger: CCAGCAGATCAGCAGCAACCAGTCAAGCCCTCCTTC...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp CTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCTGGTGGAGGAGACGAGGAACTaGAATTTCGTTGGCTACAAC +
Preference number: 4 (lower is better)
Translates to: LHCFLIPRDAICLEPHLVEETRN*NFVGYN
Trigger: GTTGTAGCCAACGAAATTCCAGTTCCTCGTCTCCTC...CACCAGATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGTGGAGGGGGCAAGGGTaGATGGAAGGCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: SCETELSAGIDELVCKLLWRGQG*MEGHKR
Trigger: TCTTTTGTGGCCTTCCATCCACCCTTGCCCCCTCCA...CAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp ACTTTTTGTAGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTGCTTATTGCAGCCTGCTTTGAGTTaGTTATGGATTGGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: TFCRGSPACLVTSFLCLLQPALS*LWIGVA
Trigger: AGCTACCCCAATCCATAACCAACTCAAAGCAGGCTG...CAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR CCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGGTGAAGGGTGCTGACTaGGAGGTCTTTGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLVKGAD*EVFASS
Trigger: GCTGGAAGCAAAGACCTCCCAGTCAGCACCCTTCAC...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp ACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCACTCGGCAAGTAGACTaGGGGAGGGCCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: TRTKSCETELSAGIDELVTRQVD*GRASFR
Trigger: CCTAAAGCTGGCCCTCCCCCAGTCTACTTGCCGAGT...GACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp CAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTACTCGGCAAGTAGACTaGGGGAGGGCCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: QNHVKPSYQLALMNWSVSTRQVD*GRASFR
Trigger: CCTAAAGCTGGCCCTCCCCCAGTCTACTTGCCGAGT...ACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp AAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGAACTCGGCAAGTAGACTaGGGGAGGGCCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: KLLGYIIKWDVSHLRHRRTRQVD*GRASFR
Trigger: CCTAAAGCTGGCCCTCCCCCAGTCTACTTGCCGAGT...TCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGCCAGTCCTGCAGTGCTaGTACAATCAGGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWPVLQC*YNQAVQ
Trigger: CTGCACCGCCTGATTGTACCAGCACTGCAGGACTGG...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAGTCTACAGCAAGCTCTaGAAGCCTCCTGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSVYSKL*KPPVLE
Trigger: CTCAAGGACAGGAGGCTTCCAGAGCTTGCTGTAGAC...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp ACTTGGAGGTTGCTCTCAGAGGGCAGACTTTTTGTAGAGGAAGTCCGGCTTGCTATCCGGATATTCCTGTaGATTTTCTCTGGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TWRLLSEGRLFVEEVRLAIRIFL*IFSGVC
Trigger: ACAGACACCAGAGAAAATCCACAGGAATATCCGGAT...AGCAAGCCGGACTTCCTCTACAAAAAGTCTGCCCTCTGAGAGCAACCTCCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR CCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGGGAAAGTCTGACCGCTaGGGAGGTTGCTCAACGACA +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLGKSDR*GGCSTT
Trigger: TGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTCC...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCTCCCCTGACATGGGCTaGACCGGTACTAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYISPDMG*TGTSIF
Trigger: GAAAATGCTAGTACCGGTCCAGCCCATGTCAGGGGA...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATATCCCCTGACATGGGCTaGACCGGTACTAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: CKSHRSAIPQIKASFPFISPDMG*TGTSIF
Trigger: GAAAATGCTAGTACCGGTCCAGCCCATGTCAGGGGA...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATCCCCTGACATGGGCTaGACCGGTACTAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSSPDMG*TGTSIF
Trigger: GAAAATGCTAGTACCGGTCCAGCCCATGTCAGGGGA...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGGTTCGTCCCCTGACATaGGCTGGACCGGTACTAGCA +
Preference number: 4 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWVRPLT*AGPVLA
Trigger: TGCTAGTACCGGTCCAGCCCATGTCAGGGGACGAAC...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp ACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCGTTCGTCCCCTGACATaGGCTGGACCGGTACTAGCA +
Preference number: 4 (lower is better)
Translates to: TRTKSCETELSAGIDELVVRPLT*AGPVLA
Trigger: TGCTAGTACCGGTCCAGCCCATGTCAGGGGACGAAC...GACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCTTCCGCCATCACAGCTaGAGAGTTGACGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYIFRHHS*RVDAQN
Trigger: GTTCTGAGCGTCAACTCTCCAGCTGTGATGGCGGAA...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCTGGTGAAACCAGCGTCCCAGTaGAGTTCAAGTAGGACATGT +
Preference number: 4 (lower is better)
Translates to: LHCFLIPRDAICLEPHLVKPASQ*SSSRTC
Trigger: ACATGTCCTACTTGAACTCCACTGGGACGCTGGTTT...CACCAGATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGTCCCAGTGGAGTTCAAGACCCCATGTGCTCAGTaGTTTAGTAAATGCCAAACC +
Preference number: 4 (lower is better)
Translates to: PCAQWFSKCQTSVPVEFKTPCAQ*FSKCQT
Trigger: GGTTTGGCATTTACTAAACCACTGAGCACATGGGGT...CTTGAACTCCACTGGGACGCTGGTTTGGCATTTACTAAACCACTGAGCACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp TCAATACCATCTGATTCCTATTTCTTTGCATGGAACCTAATTTTTCTCCTCCCTTTCCCAGCAGCTGCCTaGGTGGGGAAGCAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SIPSDSYFFAWNLIFLLPFPAAA*VGKQGK
Trigger: TTTCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAA...AGGGAGGAGAAAAATTAGGTTCCATGCAAAGAAATAGGAATCAGATGGTATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp GAAGACACTACTTCACTGTATTGTGGTATTCAGTTGTTGCTACTGAAAATCTCATTCCCAGCAGCTGCCTaGGTGGGGAAGCAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: EDTTSLYCGIQLLLLKISFPAAA*VGKQGK
Trigger: TTTCCCCTGCTTCCCCACTCAGGCAGCTGCTGGGAA...TGAGATTTTCAGTAGCAACAACTGAATACCACAATACAGTGAAGTAGTGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACAAGAAAGGATCTCTCTaGGCTCTTCCATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHKKGSL*ALPCPG
Trigger: ACCTGGACATGGAAGAGCTCAGAGAGATCCTTTCTT...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp GCTGCTGATCTGCTGGTGGCTGATCATGTGACAACACTGTGGCACGGCATTATTTGTAGGAAGCATATCTaGTGGAGGAGTACTAATCAA +
Preference number: 4 (lower is better)
Translates to: AADLLVADHVTTLWHGIICRKHI*WRSTNQ
Trigger: TTGATTAGTACTCCTCCATCAGATATGCTTCCTACA...AATAATGCCGTGCCACAGTGTTGTCACATGATCAGCCACCAGCAGATCAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp TCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGTGGCACGGCATTATTaGCCATGTAGAGCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SCETELSAGIDELVCKLLVARHY*PCRACL
Trigger: CAGACACGCTCTACATGGTCAATAATGCCGTGCCAC...CAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACAGTGGCACGGCATTATTaGCCATGTAGAGCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTVARHY*PCRACL
Trigger: CAGACACGCTCTACATGGTCAATAATGCCGTGCCAC...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGTGGTGGCTGATCATGTaGCAACACTGTGGCACGGCA +
Preference number: 4 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWWWLIM*QHCGTA
Trigger: TGCCGTGCCACAGTGTTGTCACATGATCAGCCACCA...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp GAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATATCTGAATTTCATAGCTaGCAGTGGCGCCTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: ELSAGIDELVCKLLGYIISEFHS*QWRLPR
Trigger: GCGGGGAAGGCGCCACTGTCAGCTATGAAATTCAGA...TATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp CAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTCTGAATTTCATAGCTaGCAGTGGCGCCTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: QNHVKPSYQLALMNWSVSSEFHS*QWRLPR
Trigger: GCGGGGAAGGCGCCACTGTCAGCTATGAAATTCAGA...ACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGTCTGAATTTCATAGCTaGCAGTGGCGCCTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWSEFHS*QWRLPR
Trigger: GCGGGGAAGGCGCCACTGTCAGCTATGAAATTCAGA...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp GTCTGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACTCTGAATTTCATAGCTaGCAGTGGCGCCTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: VCKLLGYIIKWDVSHLRHSEFHS*QWRLPR
Trigger: GCGGGGAAGGCGCCACTGTCAGCTATGAAATTCAGA...GTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp TCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGCTTCCAGCCTGCTTTaGGTTGGTTATGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: SCETELSAGIDELVCKLLASSLL*VGYGLG
Trigger: CCCCAATCCATAACCAACTCAAAGCAGGCTGGAAGC...CAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGGAACGTGAAGGGTGCTaGCTGGGAGGTCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWEREGC*LGGLCF
Trigger: GAAGCAAAGACCTCCCAGTCAGCACCCTTCACGTTC...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp GAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAGAACGTGAAGGGTGCTaGCTGGGAGGTCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ELSAGIDELVCKLLGYIIEREGC*LGGLCF
Trigger: GAAGCAAAGACCTCCCAGTCAGCACCCTTCACGTTC...TATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp GTCTGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACGAACGTGAAGGGTGCTaGCTGGGAGGTCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VCKLLGYIIKWDVSHLRHEREGC*LGGLCF
Trigger: GAAGCAAAGACCTCCCAGTCAGCACCCTTCACGTTC...GTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGGAAGCCTCCTGTCCTTaGGTGACAGTGTGGACACAC +
Preference number: 4 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWEASCP*VTVWTH
Trigger: GTGTGTCCACACTGTCACTCAAGGACAGGAGGCTTC...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp AAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGAGAAGCCTCCTGTCCTTaGGTGACAGTGTGGACACAC +
Preference number: 4 (lower is better)
Translates to: KLLGYIIKWDVSHLRHRREASCP*VTVWTH
Trigger: GTGTGTCCACACTGTCACTCAAGGACAGGAGGCTTC...TCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp GTCTGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACGTCCGGCTTGCTTGGTaGCCTCCTTCCTCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: VCKLLGYIIKWDVSHLRHVRLAW*PPSSAY
Trigger: ATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGAC...GTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp ACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCGTCCGGCTTGCTTGGTaGCCTCCTTCCTCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: TRTKSCETELSAGIDELVVRLAW*PPSSAY
Trigger: ATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGAC...GACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp AAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGAGTCCGGCTTGCTTGGTaGCCTCCTTCCTCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: KLLGYIIKWDVSHLRHRRVRLAW*PPSSAY
Trigger: ATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGAC...TCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp GCGACATCTCCCAGGCTGTCTCATTGTCAAGAGTGGACTTTCATCCCCAAAACGAGAAATCAGCGTTGTTaGCACCCAATAGAAAACCTA +
Preference number: 4 (lower is better)
Translates to: ATSPRLSHCQEWTFIPKTRNQRC*HPIENL
Trigger: TAGGTTTTCTATTGGGTGTCAACAACGCTGATTTCT...CGTTTTGGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACGAGGCATGTAGCTCTTaGACCTACCCTAGTAACCAT +
Preference number: 4 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHEACSS*TYPSNH
Trigger: ATGGTTACTAGGGTAGGTTCAAGAGCTACATGCCTC...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp CTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCTGGTGGATTGTCCAAAGGCCTaGTTGTCCACGATCTCAAAA +
Preference number: 4 (lower is better)
Translates to: LHCFLIPRDAICLEPHLVDCPKA*LSTISK
Trigger: TTTTGAGATCGTGGACAATCAGGCCTTTGGACAATC...CACCAGATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GTTCAAACATTGAAAGTAATTGATTTCTTCCGAGACACCTCTTTCCTTGGAGACTACATTCCCAGCAGCTaGCTGAGTGGGGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VQTLKVIDFFRDTSFLGDYIPSS*LSGEAG
Trigger: CCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTA...GTCTCCAAGGAAAGAGGTGTCTCGGAAGAAATCAATTACTTTCAATGTTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
CDS-3UTR GCA 90 bp GAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAGTGTGCCGCAGTTCCTaGAGTCGTCTGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: ELSAGIDELVCKLLGYIIVCRSS*SRLTMS
Trigger: AGACATGGTCAGACGACTGCAGGAACTGCGGCACAC...TATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTGTGTGCCGCAGTTCCTaGAGTCGTCTGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: QNHVKPSYQLALMNWSVSVCRSS*SRLTMS
Trigger: AGACATGGTCAGACGACTGCAGGAACTGCGGCACAC...ACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp ACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCGTGTGCCGCAGTTCCTaGAGTCGTCTGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: TRTKSCETELSAGIDELVVCRSS*SRLTMS
Trigger: AGACATGGTCAGACGACTGCAGGAACTGCGGCACAC...GACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAATTCTGCAACAGCTCTaGAGCAGCATCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSILQQL*SSICKT
Trigger: GGTCTTGCAGATGCTGCTGCAGAGCTGTTGCAGAAT...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTACAATCAGGCGGTaGAGCTTTCACACTCGGCAA +
Preference number: 4 (lower is better)
Translates to: LGYIIKWDVSHLRHRRLGGTIRR*SFHTRQ
Trigger: TTGCCGAGTGTGAAAGCTGCACCGCCTGATTGTACC...TCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTACAATCAGGCGGTaGAGCTTTCACACTCGGCAA +
Preference number: 4 (lower is better)
Translates to: SCETELSAGIDELVCKLLGTIRR*SFHTRQ
Trigger: TTGCCGAGTGTGAAAGCTGCACCGCCTGATTGTACC...CAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGCTTCTCAGATGCTGCTaGTGCTGCTGCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLLLRCC*CCCCCC
Trigger: ACAGCAACAGCAGCAGCAGCAGCAGCATCTGAGAAG...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACGGTTGTGTTCGCACTTaGTTCTCAGATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ETELSAGIDELVCKLLGYGCVRT*FSDAAA
Trigger: AGCAGCAGCATCTGAGAAGCAAGTGCGAACACAACC...GTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACATTTTGTCTGTGTAGATaGCCGTCAGGGGAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTFCLCR*PSGESG
Trigger: TCCACTTTCCCCTGACGGGCATCTACACAGACAAAA...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGCAGGGACTCACTGTCTaGCAGTCTTCTACCGGATCT +
Preference number: 4 (lower is better)
Translates to: SCETELSAGIDELVCKLLQGLTV*QSSTGS
Trigger: AGATCCGGTAGAAGACTGGCAGACAGTGAGTCCCTG...CAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp ACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCAGAGGAAGTCCGGCTTaGTTGGTGACCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TRTKSCETELSAGIDELVRGSPA*LVTSFL
Trigger: GAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCT...GACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp AAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGAAGAGGAAGTCCGGCTTaGTTGGTGACCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KLLGYIIKWDVSHLRHRRRGSPA*LVTSFL
Trigger: GAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCT...TCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAAGACGACTTGGAGGTTaGTCTCAGAGGGCAGACTTT +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSRRLGG*SQRADF
Trigger: AAAGTCTGCCCTCTGAGAGCAACCTCCAAGTCGTCT...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGAACAGGTGTGAGTCACTaGGCCCGGTCTCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: CKLLGYIIKWDVSHLRHRTGVSH*ARSPLL
Trigger: AAGCAGTGGAGACCGGGCGCAGTGACTCACACCTGT...TCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGGTGGGAGCACAGTGGTaGAATCTTGGCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWVGAQW*NLGSLQ
Trigger: CTGCAGTGAGCCAAGATTGCACCACTGTGCTCCCAC...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TTCACAAGATACATTAAAAGTCCACTAACACCTAACCTAACGCACACAAAACCCACAGGGTCTCACTGTTaGCCAGGTGGGAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: FTRYIKSPLTPNLTHTKPTGSHC*PGGSTV
Trigger: CACTGTGCTCCCACCTGGGCAACAGTGAGACCCTGT...GGGTTTTGTGTGCGTTAGGTTAGGTGTTAGTGGACTTTTAATGTATCTTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGAACAGGGTCTCACTGTTaGCCAGGTGGGAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: CKLLGYIIKWDVSHLRHRTGSHC*PGGSTV
Trigger: CACTGTGCTCCCACCTGGGCAACAGTGAGACCCTGT...TCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACACAGTGGTTTAGTAAATaGCAAACCAGCGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: AVPAQYMNMSTYICGRNTQWFSK*QTSVPV
Trigger: CACTGGGACGCTGGTTTGGCATTTACTAAACCACTG...TGTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAAGCCTAACGGGTTATTaGGGTGTCAGGCTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LGYIIKWDVSHLRHRRLGSLTGY*GVRLAE
Trigger: CTCAGCTAGCCTGACACCGCAATAACCCGTTAGGCT...TCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAAGCACCCATCACTGCTaGTTTGTCACTCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSSTHHC*FVTPES
Trigger: GCTTTCTGGAGTGACAAAGCAGCAGTGATGGGTGCT...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATAAGCACCCATCACTGCTaGTTTGTCACTCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: CKSHRSAIPQIKASFPFISTHHC*FVTPES
Trigger: GCTTTCTGGAGTGACAAAGCAGCAGTGATGGGTGCT...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCCTTTTGTTCACACTATaGGCAGTGCCACTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCLLFTL*AVPLSK
Trigger: CTTACTGAGTGGCACTGCCCATAGTGTGAACAAAAG...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp AAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGAGAAGGAGGGCTTGACTaGTTGCTGCTGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KLLGYIIKWDVSHLRHRREGGLD*LLLICW
Trigger: CCAGCAGATCAGCAGCAACCAGTCAAGCCCTCCTTC...TCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp GAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATATGGAGGGGGCAAGGGTaGATGGAAGGCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: ELSAGIDELVCKLLGYIIWRGQG*MEGHKR
Trigger: TCTTTTGTGGCCTTCCATCCACCCTTGCCCCCTCCA...TATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp CAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTGTGAAGGGTGCTGACTaGGAGGTCTTTGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QNHVKPSYQLALMNWSVSVKGAD*EVFASS
Trigger: GCTGGAAGCAAAGACCTCCCAGTCAGCACCCTTCAC...ACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp ACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCGTGAAGGGTGCTGACTaGGAGGTCTTTGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TRTKSCETELSAGIDELVVKGAD*EVFASS
Trigger: GCTGGAAGCAAAGACCTCCCAGTCAGCACCCTTCAC...GACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAACCCACCGCGATGTCTaGCATCAGATCATTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LGYIIKWDVSHLRHRRLGTHRDV*HQIIQH
Trigger: GTGCTGAATGATCTGATGCCAGACATCGCGGTGGGT...TCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACAACCCACCGCGATGTCTaGCATCAGATCATTCAGCAC +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTTHRDV*HQIIQH
Trigger: GTGCTGAATGATCTGATGCCAGACATCGCGGTGGGT...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACAGTCTACAGCAAGCTCTaGAAGCCTCCTGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTVYSKL*KPPVLE
Trigger: CTCAAGGACAGGAGGCTTCCAGAGCTTGCTGTAGAC...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGAATACACGACAGATGCTaGGGAGGCCCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CKLLGYIIKWDVSHLRHRIHDRC*GGPGPA
Trigger: AGCAGGACCAGGGCCTCCCCAGCATCTGTCGTGTAT...TCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGATCCGGATATTCCTGTaGATTTTCTCTGGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPAIRIFL*IFSGVC
Trigger: ACAGACACCAGAGAAAATCCACAGGAATATCCGGAT...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CTGGCATCAGATCATTCAGCACAGGTTGTGTTCGCACTTGCTTCTCAGATGCTGATCCGGATATTCCTGTaGATTTTCTCTGGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LASDHSAQVVFALASQMLIRIFL*IFSGVC
Trigger: ACAGACACCAGAGAAAATCCACAGGAATATCCGGAT...CAGCATCTGAGAAGCAAGTGCGAACACAACCTGTGCTGAATGATCTGATGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR CCA 90 bp CATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGGTGATGCCTTATTGTaGCTGTACAGATCGGGACCA +
Preference number: 4 (lower is better)
Translates to: HVKPSYQLALMNWSVSCWGDALL*LYRSGP
Trigger: TGGTCCCGATCTGTACAGCCACAATAAGGCATCACC...CCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGGGAAAGTCTGACCGCTaGGGAGGTTGCTCAACGACA +
Preference number: 4 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWGKSDR*GGCSTT
Trigger: TGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTCC...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp GTCTGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACGGAAAGTCTGACCGCTaGGGAGGTTGCTCAACGACA +
Preference number: 4 (lower is better)
Translates to: VCKLLGYIIKWDVSHLRHGKSDR*GGCSTT
Trigger: TGTCGTTGAGCAACCTCCCCAGCGGTCAGACTTTCC...GTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCCCCTGACATGGGCTaGACCGGTACTAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTSPDMG*TGTSIF
Trigger: GAAAATGCTAGTACCGGTCCAGCCCATGTCAGGGGA...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGTCCCCTGACATGGGCTaGACCGGTACTAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLSPDMG*TGTSIF
Trigger: GAAAATGCTAGTACCGGTCCAGCCCATGTCAGGGGA...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TTCACAAGATACATTAAAAGTCCACTAACACCTAACCTAACGCACACAAAACCCCTTCAGGACCCTGACTaGACTCCCGCTGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: FTRYIKSPLTPNLTHTKPLQDPD*TPAGGM
Trigger: CATTCCTCCAGCGGGAGTCCAGTCAGGGTCCTGAAG...GGGTTTTGTGTGCGTTAGGTTAGGTGTTAGTGGACTTTTAATGTATCTTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACAAGACAGACAGAGACTaGGCTTCAAAAGACACCGTC +
Preference number: 4 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHKTDRD*ASKDTV
Trigger: GACGGTGTCTTTTGAAGCCCAGTCTCTGTCTGTCTT...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGCTAGAGAATGATGCATaGAGGTCGGCTTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLLENDA*RSALSP
Trigger: GGGGCTCAAAGCCGACCTCCATGCATCATTCTCTAG...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
3UTR CAA 72 bp GTGTACTGTTTACGCGACATCTCCCAGGCTGTCTCATaGTCAAGAGTGGACTTTCATCCCCAAAACGTTCAT +
Preference number: 4 (lower is better)
Translates to: VYCLRDISQAVS*SRVDFHPQNVH
Trigger: ATGAACGTTTTGGGGATGAAAGTCCACTCTTGACAATGAGACAGCCTGGGAGATGTCGCGTAAACAGTACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR TCA 90 bp GAGGATCCTGAAAGACCCCATGTGCTCAGTGGTTTAGTAAATGCCAAACCAGCGAGGATATCGACATTTTaGAACCTTGAGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: EDPERPHVLSGLVNAKPARISTF*NLESSI
Trigger: AATGGAGGACTCAAGGTTTCAAAATGTCGATATCCT...CGCTGGTTTGGCATTTACTAAACCACTGAGCACATGGGGTCTTTCAGGATCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334746.10
ENST00000613725.4
CDS-3UTR TCA 90 bp CTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCTGGTGTCAAAGTTCGGTCTGTaGTTTCTTCACCAGTTCGTA +
Preference number: 4 (lower is better)
Translates to: LHCFLIPRDAICLEPHLVSKFGL*FLHQFV
Trigger: TACGAACTGGTGAAGAAATCACAGACCGAACTTTGA...CACCAGATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334746.10
ENST00000613725.4
CDS-3UTR TCA 90 bp TTGCTTCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCATTGTTCTTTTTGCTCTaGTCTCTGTCTCAATTTGGA +
Preference number: 4 (lower is better)
Translates to: LLRHLVEYIPSSCLSGEALFFLL*SLSQFG
Trigger: TCCAAATTGAGACAGAGATCAGAGCAAAAAGAACAA...TGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGAAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp ATACCATCTGATTCCTATTTCTTTGCATGGAACCTAATTTTTCTCCTCCCTGCAGACCTACTGTGTGGCTaGTGCGTGGGATCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: IPSDSYFFAWNLIFLLPADLLCG*CVGSPF
Trigger: AAAGGGAGATCCCACGCATCAGCCACACAGTAGGTC...TGCAGGGAGGAGAAAAATTAGGTTCCATGCAAAGAAATAGGAATCAGATGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR TCA 90 bp TTGCTTCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCAAACATTGAAAGTAATTaGTTTCTTCCGAGACACCTC +
Preference number: 4 (lower is better)
Translates to: LLRHLVEYIPSSCLSGEANIESN*FLPRHL
Trigger: GAGGTGTCTCGGAAGAAATCAATTACTTTCAATGTT...TGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298896.7
ENST00000613511.3
CDS-3UTR TCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACTTAGAGCCATATGGATaGGAACTCCACTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHLEPYG*ELHLRM
Trigger: CATCCTCAAGTGGAGTTCTCATCCATATGGCTCTAA...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334746.10
ENST00000613725.4
CDS-3UTR TCA 90 bp GAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACAAGAAAGGATCTCTCTaGGCTCTTCCATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ETELSAGIDELVCKLLGYKKGSL*ALPCPG
Trigger: ACCTGGACATGGAAGAGCTCAGAGAGATCCTTTCTT...GTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp GTCTGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACGTGGCACGGCATTATTaGCCATGTAGAGCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VCKLLGYIIKWDVSHLRHVARHY*PCRACL
Trigger: CAGACACGCTCTACATGGTCAATAATGCCGTGCCAC...GTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGGCTTCCAGCCTGCTTTaGGTTGGTTATGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWASSLL*VGYGLG
Trigger: CCCCAATCCATAACCAACTCAAAGCAGGCTGGAAGC...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp CAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTGCTTCCAGCCTGCTTTaGGTTGGTTATGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: QNHVKPSYQLALMNWSVSASSLL*VGYGLG
Trigger: CCCCAATCCATAACCAACTCAAAGCAGGCTGGAAGC...ACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp ACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCGCTTCCAGCCTGCTTTaGGTTGGTTATGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: TRTKSCETELSAGIDELVASSLL*VGYGLG
Trigger: CCCCAATCCATAACCAACTCAAAGCAGGCTGGAAGC...GACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR TCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCAAGAGAGGAGCATTCTaGTGTGCTGTTCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCKRGAF*CAVLWN
Trigger: ATTCCAAAGAACAGCACATCAGAATGCTCCTCTCTT...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp TACACAAAAACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATCAAACTTCAGGACCCTaGCTGGACTCCCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: YTKTRTKSCETELSAGIDQTSGP*LDSRWR
Trigger: CCTCCAGCGGGAGTCCAGTCAGGGTCCTGAAGTTTG...ATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGTTTTTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp TGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGAGGGAAGGGTCAGGGATaGGAGTTTTTCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: CKLLGYIIKWDVSHLRHRGKGQG*EFFSPS
Trigger: GGATGGGGAGAAAAACTCTCATCCCTGACCCTTCCC...TCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR TCA 90 bp TGCAGTACCGGCGCAGTACATGAACATGTCAACATACATATGTGGCAGAAACACGATTTTCCACCTCTCTaGAGTACAGATGTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: CSTGAVHEHVNIHMWQKHDFPPL*STDVVH
Trigger: ATGCACCACATCTGTACTTCAGAGAGGTGGAAAATC...GTGTTTCTGCCACATATGTATGTTGACATGTTCATGTACTGCGCCGGTACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CGAGGTATGACTGAAAAATGCCTTTATTTAGCCTTACACTTGATTGACTGTTTGTACATTCCCAGCAGCTaGCTGAGTGGGGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RGMTEKCLYLALHLIDCLYIPSS*LSGEAG
Trigger: CCCTGCTTCCCCACTCAGGCAGCTGCTGGGAATGTA...CAAACAGTCAATCAAGTGTAAGGCTAAATAAAGGCATTTTTCAGTCATACCTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR GCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATCACACTATGGGCAGTaGCACTCAGTAAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSSHYGQ*HSVSLA
Trigger: AGCCAAACTTACTGAGTGGCACTGCCCATAGTGTGA...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACTCACACTATGGGCAGTaGCACTCAGTAAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: ETELSAGIDELVCKLLGYSHYGQ*HSVSLA
Trigger: AGCCAAACTTACTGAGTGGCACTGCCCATAGTGTGA...GTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCTCACACTATGGGCAGTaGCACTCAGTAAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYISHYGQ*HSVSLA
Trigger: AGCCAAACTTACTGAGTGGCACTGCCCATAGTGTGA...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCTCTTTGCTTCCAGCCTaGTTTGAGTTGGTTATGGAT +
Preference number: 4 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCSLLPA*FELVMD
Trigger: ATCCATAACCAACTCAAAGCAGGCTGGAAGCAAAGA...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp CTCCACTGCTTTCTAATTCCAAGGGATGCGATCTGTTTAGAGCCTCATCTGGTGTCTTTGCTTCCAGCCTaGTTTGAGTTGGTTATGGAT +
Preference number: 4 (lower is better)
Translates to: LHCFLIPRDAICLEPHLVSLLPA*FELVMD
Trigger: ATCCATAACCAACTCAAAGCAGGCTGGAAGCAAAGA...CACCAGATGAGGCTCTAAACAGATCGCATCCCTTGGAATTAGAAAGCAGTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp ACTTTTTGTAGAGGAAGTCCGGCTTGCTTGGTGACCTCCTTCCTCTGCTTATTGTCTTTGCTTCCAGCCTaGTTTGAGTTGGTTATGGAT +
Preference number: 4 (lower is better)
Translates to: TFCRGSPACLVTSFLCLLSLLPA*FELVMD
Trigger: ATCCATAACCAACTCAAAGCAGGCTGGAAGCAAAGA...CAATAAGCAGAGGAAGGAGGTCACCAAGCAAGCCGGACTTCCTCTACAAAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355125.3
ENST00000620259.2
CDS-3UTR GCA 90 bp GTCTGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACGGTACAATCAGGCGGTaGAGCTTTCACACTCGGCAA +
Preference number: 4 (lower is better)
Translates to: VCKLLGYIIKWDVSHLRHGTIRR*SFHTRQ
Trigger: TTGCCGAGTGTGAAAGCTGCACCGCCTGATTGTACC...GTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp CAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTGGTACAATCAGGCGGTaGAGCTTTCACACTCGGCAA +
Preference number: 4 (lower is better)
Translates to: QNHVKPSYQLALMNWSVSGTIRR*SFHTRQ
Trigger: TTGCCGAGTGTGAAAGCTGCACCGCCTGATTGTACC...ACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACTGTCTGCCCAGTCCTaGAGTGCTGGTACAATCAGG +
Preference number: 4 (lower is better)
Translates to: CKLLGYIIKWDVSHLRHRLSAQS*SAGTIR
Trigger: CCTGATTGTACCAGCACTGCAGGACTGGGCAGACAG...TCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp AAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTCTCAGATGCTGCTaGTGCTGCTGCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KLLGYIIKWDVSHLRHRRLLRCC*CCCCCC
Trigger: ACAGCAACAGCAGCAGCAGCAGCAGCATCTGAGAAG...TCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GTCTGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACCTTCTCAGATGCTGCTaGTGCTGCTGCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VCKLLGYIIKWDVSHLRHLLRCC*CCCCCC
Trigger: ACAGCAACAGCAGCAGCAGCAGCAGCATCTGAGAAG...GTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp ACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTTGCTTCTCAGATGCTaGTGCTGCTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TRTKSCETELSAGIDELVLLLRC*CCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAGCATCTGAGAAGCAA...GACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGGGTTGTGTTCGCACTTaGTTCTCAGATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLGCVRT*FSDAAA
Trigger: AGCAGCAGCATCTGAGAAGCAAGTGCGAACACAACC...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACAGGTTGTGTTCGCACTTaGTTCTCAGATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTGCVRT*FSDAAA
Trigger: AGCAGCAGCATCTGAGAAGCAAGTGCGAACACAACC...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GCATGTGAGAACGGGCGTGGAAAATTGAAACAATTACGTTTCAAATACTTTTTGGGAATACACGACAGATaGTGGGGAGGCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ACENGRGKLKQLRFKYFLGIHDR*WGGPGP
Trigger: AGGACCAGGGCCTCCCCAGCATCTGTCGTGTATTCC...CAAAAAGTATTTGAAACGTAATTGTTTCAATTTTCCACGCCCGTTCTCACATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCTTTTGTCTGTGTAGATaGCCGTCAGGGGAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYIFCLCR*PSGESG
Trigger: TCCACTTTCCCCTGACGGGCATCTACACAGACAAAA...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp AAAACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGACCGCTGGGGAGGTTaGTCAACGACATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: KTRTKSCETELSAGIDELDRWGG*STTSRC
Trigger: ACACCTGGATGTCGTTGAGCAACCTCCCCAGCGGTC...CAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATACAAGTCAGTTTCTACTaGAGTTCGTCCCCTGACATG +
Preference number: 4 (lower is better)
Translates to: CKSHRSAIPQIKASFPFIQVSFY*SSSPDM
Trigger: CATGTCAGGGGACGAACTGCAGTAGAAACTGACTTG...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCCAAGTCAGTTTCTACTaGAGTTCGTCCCCTGACATG +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYIQVSFY*SSSPDM
Trigger: CATGTCAGGGGACGAACTGCAGTAGAAACTGACTTG...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGCAGGGACTCACTGTCTaGCAGTCTTCTACCGGATCT +
Preference number: 4 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWQGLTV*QSSTGS
Trigger: AGATCCGGTAGAAGACTGGCAGACAGTGAGTCCCTG...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp ACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCCAGGGACTCACTGTCTaGCAGTCTTCTACCGGATCT +
Preference number: 4 (lower is better)
Translates to: TRTKSCETELSAGIDELVQGLTV*QSSTGS
Trigger: AGATCCGGTAGAAGACTGGCAGACAGTGAGTCCCTG...GACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp GAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATACAGGGACTCACTGTCTaGCAGTCTTCTACCGGATCT +
Preference number: 4 (lower is better)
Translates to: ELSAGIDELVCKLLGYIIQGLTV*QSSTGS
Trigger: AGATCCGGTAGAAGACTGGCAGACAGTGAGTCCCTG...TATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGAGACGACTTGGAGGTTaGTCTCAGAGGGCAGACTTT +
Preference number: 4 (lower is better)
Translates to: SCETELSAGIDELVCKLLRRLGG*SQRADF
Trigger: AAAGTCTGCCCTCTGAGAGCAACCTCCAAGTCGTCT...CAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGAGACGACTTGGAGGTTaGTCTCAGAGGGCAGACTTT +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLRRLGG*SQRADF
Trigger: AAAGTCTGCCCTCTGAGAGCAACCTCCAAGTCGTCT...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR GCA 90 bp ACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCGCGCCCGGTCTCCACTaGTTTCTAATTCCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: TRTKSCETELSAGIDELVAPGLH*FLIPRD
Trigger: ATCCCTTGGAATTAGAAAGCAGTGGAGACCGGGCGC...GACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp TTCACAAGATACATTAAAAGTCCACTAACACCTAACCTAACGCACACAAAACCCGTGGGAGCACAGTGGTaGAATCTTGGCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: FTRYIKSPLTPNLTHTKPVGAQW*NLGSLQ
Trigger: CTGCAGTGAGCCAAGATTGCACCACTGTGCTCCCAC...GGGTTTTGTGTGCGTTAGGTTAGGTGTTAGTGGACTTTTAATGTATCTTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp GAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACCTGTTGAGTCTTACTTaGAGTACCGGCGCAGTACAT +
Preference number: 4 (lower is better)
Translates to: ETELSAGIDELVCKLLGYLLSLT*STGAVH
Trigger: ATGTACTGCGCCGGTACTGCAAGTAAGACTCAACAG...GTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR GCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCCTGTTGAGTCTTACTTaGAGTACCGGCGCAGTACAT +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYILLSLT*STGAVH
Trigger: ATGTACTGCGCCGGTACTGCAAGTAAGACTCAACAG...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp AAGACCTACTGTGTGGCTGATGCGTGGGATCTCCCTTTGCTTCCTTCCCGTGTTTACATCAAGGGAATTTaGTGTTCCAAATTCTTCACT +
Preference number: 4 (lower is better)
Translates to: KTYCVADAWDLPLLPSRVYIKGI*CSKFFT
Trigger: AGTGAAGAATTTGGAACACCAAATTCCCTTGATGTA...AACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACAGTAGGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR CCA 90 bp AAGACCTACTGTGTGGCTGATGCGTGGGATCTCCCTTTGCTTCCTTCCCGTGTTTACTTCACTGTATTGTaGTATTCAGTTGTTGCTACT +
Preference number: 4 (lower is better)
Translates to: KTYCVADAWDLPLLPSRVYFTVL*YSVVAT
Trigger: AGTAGCAACAACTGAATACCACAATACAGTGAAGTA...AACACGGGAAGGAAGCAAAGGGAGATCCCACGCATCAGCCACACAGTAGGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR CCA 90 bp TTGCTTCGTCATTTGGTGGAATACATTCCCAGCAGCTGCCTGAGTGGGGAAGCATTTTCCATCAGCTTTTaGAAGACACTACTTCACTGT +
Preference number: 4 (lower is better)
Translates to: LLRHLVEYIPSSCLSGEAFSISF*KTLLHC
Trigger: ACAGTGAAGTAGTGTCTTCCAAAAGCTGATGGAAAA...TGCTTCCCCACTCAGGCAGCTGCTGGGAATGTATTCCACCAAATGACGAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000298896.7
ENST00000555525.1
ENST00000613511.3
ENST00000625801.1
CDS-3UTR CCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCCCATTTAGAGCCATATaGATGAGAACTCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCPFRAI*MRTPLE
Trigger: CTCAAGTGGAGTTCTCATCCATATGGCTCTAAATGG...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334746.10
ENST00000613725.4
CDS-3UTR CCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATATCCGAAGTCATGACCTaGGAAAATTCCTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: CKSHRSAIPQIKASFPFISEVMT*ENSSQR
Trigger: CCTCTGTGAGGAATTTTCCCAGGTCATGACTTCGGA...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334746.10
ENST00000613725.4
CDS-3UTR CCA 90 bp ACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCGAACTGGAATTTCGTTaGCTACAACTGAAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TELSAGIDELVCKLLGYIELEFR*LQLKEG
Trigger: GCCCTCCTTCAGTTGTAGCCAACGAAATTCCAGTTC...GATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATAGAACTGGAATTTCGTTaGCTACAACTGAAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: CKSHRSAIPQIKASFPFIELEFR*LQLKEG
Trigger: GCCCTCCTTCAGTTGTAGCCAACGAAATTCCAGTTC...TATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp CCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCAGAGGAGACGAGGAACTaGAATTTCGTTGGCTACAAC +
Preference number: 4 (lower is better)
Translates to: PSYQLALMNWSVSCWVTSEETRN*NFVGYN
Trigger: GTTGTAGCCAACGAAATTCCAGTTCCTCGTCTCCTC...TGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp GAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACCAGCCTGCTTTGAGTTaGTTATGGATTGGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: ETELSAGIDELVCKLLGYQPALS*LWIGVA
Trigger: AGCTACCCCAATCCATAACCAACTCAAAGCAGGCTG...GTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp AAAACTAGAACAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGCCAGTCCTGCAGTGCTaGTACAATCAGGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KTRTKSCETELSAGIDELPVLQC*YNQAVQ
Trigger: CTGCACCGCCTGATTGTACCAGCACTGCAGGACTGG...CAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTGTTCTAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp GAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAACCCACCGCGATGTCTaGCATCAGATCATTCAGCAC +
Preference number: 4 (lower is better)
Translates to: ELSAGIDELVCKLLGYIITHRDV*HQIIQH
Trigger: GTGCTGAATGATCTGATGCCAGACATCGCGGTGGGT...TATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp CAAAATCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTGTCTACAGCAAGCTCTaGAAGCCTCCTGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: QNHVKPSYQLALMNWSVSVYSKL*KPPVLE
Trigger: CTCAAGGACAGGAGGCTTCCAGAGCTTGCTGTAGAC...ACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp GTCTGTAAGTTGTTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACGTCTACAGCAAGCTCTaGAAGCCTCCTGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: VCKLLGYIIKWDVSHLRHVYSKL*KPPVLE
Trigger: CTCAAGGACAGGAGGCTTCCAGAGCTTGCTGTAGAC...GTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp GAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAGTCTACAGCAAGCTCTaGAAGCCTCCTGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: ELSAGIDELVCKLLGYIIVYSKL*KPPVLE
Trigger: CTCAAGGACAGGAGGCTTCCAGAGCTTGCTGTAGAC...TATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACATCATAAAATGGGTCTACAGCAAGCTCTaGAAGCCTCCTGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: SAGIDELVCKLLGYIIKWVYSKL*KPPVLE
Trigger: CTCAAGGACAGGAGGCTTCCAGAGCTTGCTGTAGAC...CCATTTTATGATGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp CCTCATCTGGTGACTCTAATCCTTATGACCAGAATGTGCAGGGATTCTGACTGCATCCGGATATTCCTGTaGATTTTCTCTGGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: PHLVTLILMTRMCRDSDCIRIFL*IFSGVC
Trigger: ACAGACACCAGAGAAAATCCACAGGAATATCCGGAT...GCAGTCAGAATCCCTGCACATTCTGGTCATAAGGATTAGAGTCACCAGATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000613725.4
ENST00000620259.2
CDS-3UTR CCA 90 bp TCATGTGAAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTGATGCCTTATTGTaGCTGTACAGATCGGGACCA +
Preference number: 4 (lower is better)
Translates to: SCETELSAGIDELVCKLLGDALL*LYRSGP
Trigger: TGGTCCCGATCTGTACAGCCACAATAAGGCATCACC...CAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTTCACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp AAACCGAGTTATCAGCTGGCATTGATGAACTGGTCTGTAAGTTGTTGGGTTACAGGTGATGCCTTATTGTaGCTGTACAGATCGGGACCA +
Preference number: 4 (lower is better)
Translates to: KPSYQLALMNWSVSCWVTGDALL*LYRSGP
Trigger: TGGTCCCGATCTGTACAGCCACAATAAGGCATCACC...TGTAACCCAACAACTTACAGACCAGTTCATCAATGCCAGCTGATAACTCGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTTGGGTGATGCCTTATTGTaGCTGTACAGATCGGGACCA +
Preference number: 4 (lower is better)
Translates to: LHHKMGCFTSQAQTTWRLGDALL*LYRSGP
Trigger: TGGTCCCGATCTGTACAGCCACAATAAGGCATCACC...CAACCTCCAAGTCGTCTGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334746.10
ENST00000355125.3
ENST00000553975.1
ENST00000554565.5
ENST00000613725.4
ENST00000620259.2
ENST00000627779.2
ENST00000628944.1
CDS-3UTR CCA 90 bp TTGGGTTACATCATAAAATGGGATGTTTCACATCTCAGGCACAGACGACTTGGAGGTGATGCCTTATTGTaGCTGTACAGATCGGGACCA +
Preference number: 4 (lower is better)
Translates to: LGYIIKWDVSHLRHRRLGGDALL*LYRSG