RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BTBD16 (Homo sapiens)

Ensembl gene IDs: ENSG00000138152

Ensembl transcript IDs: ENST00000260723.6, ENST00000495370.2

Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GCCGTCAACCAGGGCCTCTGCTCTGATCTCATACTTCACCAGGCGTaGCGCTCGCAGGCTGACGTGGTTGTGCTCGTAGACCGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: AVNQGLCSDLILHQA*RSQADVVVLVDRRG
Trigger: CCCTCTGCGGTCTACGAGCACAACCACGTCAGCCTGCGAGCGGCACGCCTGGTGAAGTATGAGATCAGAGCAGAGGCCCTGGTTGACGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260723.6
ENST00000495370.2
CDS TCA 90 bp CAGGTCCCCAGAGAAAGGCTGTTTGGGCAAACGCCACCGGTTGGTTaGGCCAGTGACCCGGCGTTCCAGCCGAGCTTTGTGCGTGTTCGA +
Preference number: 5 (lower is better)
Translates to: QVPRERLFGQTPPVG*ASDPAFQPSFVRVR
Trigger: TCGAACACGCACAAAGCTCGGCTGGAACGCCGGGTCACTGGCTCAACCAACCGGTGGCGTTTGCCCAAACAGCCTTTCTCTGGGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS GCA 90 bp CTGGTTTGTCCTGAACTCCTGCCACTTGCCGTCAACCAGGGCCTCTaGTCTGATCTCATACTTCACCAGGCGTGCCGCTCGCAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: LVCPELLPLAVNQGL*SDLILHQACRSQAD
Trigger: GTCAGCCTGCGAGCGGCACGCCTGGTGAAGTATGAGATCAGAGCAGAGGCCCTGGTTGACGGCAAGTGGCAGGAGTTCAGGACAAACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CCA 90 bp AGTGGAGGAACTCCCATCACACTGGCCTCTGAGTTACAGGAGAGCTaGGGGCGCCTTCTGAGCCTGAAGCCTGGAAGCGCTCATCACATC +
Preference number: 5 (lower is better)
Translates to: SGGTPITLASELQES*GRLLSLKPGSAHHI
Trigger: GATGTGATGAGCGCTTCCAGGCTTCAGGCTCAGAAGGCGCCCCCAGCTCTCCTGTAACTCAGAGGCCAGTGTGATGGGAGTTCCTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS TCA 90 bp CAGAGAAAGGCTGTTTGGGCAAACGCCACCGGTTGGTTGAGCCAGTaGCCCGGCGTTCCAGCCGAGCTTTGTGCGTGTTCGACATTATCA +
Preference number: 5 (lower is better)
Translates to: QRKAVWANATGWLSQ*PGVPAELCACSTLS
Trigger: TGATAATGTCGAACACGCACAAAGCTCGGCTGGAACGCCGGGTCACTGGCTCAACCAACCGGTGGCGTTTGCCCAAACAGCCTTTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS TCA 90 bp AGCTTCCTCAAAGTCTATGCTCAGAGCCTTGCACATCTGGGAAAGTaGGAGCAGGTCCCCAGAGAAAGGCTGTTTGGGCAAACGCCACCG +
Preference number: 5 (lower is better)
Translates to: SFLKVYAQSLAHLGK*EQVPRERLFGQTPP
Trigger: CGGTGGCGTTTGCCCAAACAGCCTTTCTCTGGGGACCTGCTCTCACTTTCCCAGATGTGCAAGGCTCTGAGCATAGACTTTGAGGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS GCA 90 bp TTGACTGTAACCTGGTCGAGCCATGACTCTGGGAAGAAGTTAAGGTaGCGCAGCACCTCCAGATCCTTGCCTTTGGTGATGCCGTGCAGA +
Preference number: 5 (lower is better)
Translates to: LTVTWSSHDSGKKLR*RSTSRSLPLVMPCR
Trigger: TCTGCACGGCATCACCAAAGGCAAGGATCTGGAGGTGCTGCGGCACCTTAACTTCTTCCCAGAGTCATGGCTCGACCAGGTTACAGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CCA 90 bp AAGAGCAGCCCAAATCTCACAGCCTGGGTGTTAAGATCTTTCAGGTaGACCATGTCGCCCCCATTCTCCAGTGTGTCTGGCACTGTGTCC +
Preference number: 5 (lower is better)
Translates to: KSSPNLTAWVLRSFR*TMSPPFSSVSGTVS
Trigger: GGACACAGTGCCAGACACACTGGAGAATGGGGGCGACATGGTCCACCTGAAAGATCTTAACACCCAGGCTGTGAGATTTGGGCTGCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495370.2
CDS CCA 90 bp TGGCTTTTGCAGGATGACGTGGTCAACCCAAACTTCTGCTTGATCTaGTTTGTCCTGAACTCCTGCCACTTGCCGTCAACCAGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: WLLQDDVVNPNFCLI*FVLNSCHLPSTRAS
Trigger: AGAGGCCCTGGTTGACGGCAAGTGGCAGGAGTTCAGGACAAACCAGATCAAGCAGAAGTTTGGGTTGACCACGTCATCCTGCAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS TCA 90 bp ATTCTCCAGTGCGTGGTAATGGTTGACTGTAACCTGGTCGAGCCATaGCTCTGGGAAGAAGTTAAGGTGCCGCAGCACCTCCAGATCCTT +
Preference number: 5 (lower is better)
Translates to: ILQCVVMVDCNLVEP*LWEEVKVPQHLQIL
Trigger: AAGGATCTGGAGGTGCTGCGGCACCTTAACTTCTTCCCAGAGTCATGGCTCGACCAGGTTACAGTCAACCATTACCACGCACTGGAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS GCA 90 bp GTGGTCAACCCAAACTTCTGCTTGATCTGGTTTGTCCTGAACTCCTaGCACTTGCCGTCAACCAGGGCCTCTGCTCTGATCTCATACTTC +
Preference number: 5 (lower is better)
Translates to: VVNPNFCLIWFVLNS*HLPSTRASALISYF
Trigger: GAAGTATGAGATCAGAGCAGAGGCCCTGGTTGACGGCAAGTGGCAGGAGTTCAGGACAAACCAGATCAAGCAGAAGTTTGGGTTGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS GCA 90 bp TGTCTGGGTTCCTCAAAGCTTCCTCAAAGTCTATGCTCAGAGCCTTaGACATCTGGGAAAGTGAGAGCAGGTCCCCAGAGAAAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: CLGSSKLPQSLCSEP*TSGKVRAGPQRKAV
Trigger: AACAGCCTTTCTCTGGGGACCTGCTCTCACTTTCCCAGATGTGCAAGGCTCTGAGCATAGACTTTGAGGAAGCTTTGAGGAACCCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CCA 90 bp TTCCTCAAAGCTTCCTCAAAGTCTATGCTCAGAGCCTTGCACATCTaGGAAAGTGAGAGCAGGTCCCCAGAGAAAGGCTGTTTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: FLKASSKSMLRALHI*ESESRSPEKGCLGK
Trigger: TTTGCCCAAACAGCCTTTCTCTGGGGACCTGCTCTCACTTTCCCAGATGTGCAAGGCTCTGAGCATAGACTTTGAGGAAGCTTTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CCA 90 bp TTCCTTGTACTTGCAGCCGGCCTCGTAGAATTTCTTGATGGTGCTTaGCTTGAGTCTGGCTATCATCACATCCACGCACCTTTGAAACAG +
Preference number: 5 (lower is better)
Translates to: FLVLAAGLVEFLDGA*LESGYHHIHAPLKQ
Trigger: CTGTTTCAAAGGTGCGTGGATGTGATGATAGCCAGACTCAAGCCAAGCACCATCAAGAAATTCTACGAGGCCGGCTGCAAGTACAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS TCA 90 bp ACTCGAGAATCACATCTGCTTCCCCACTTTGGATGTCCTTGTTCTTaGAATTCTCAAAGAAAAACTTCTGGATTTGTGAAATGCATAACC +
Preference number: 5 (lower is better)
Translates to: TRESHLLPHFGCPCS*NSQRKTSGFVKCIT
Trigger: GGTTATGCATTTCACAAATCCAGAAGTTTTTCTTTGAGAATTTCAAGAACAAGGACATCCAAAGTGGGGAAGCAGATGTGATTCTCGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CAA 90 bp GAGAGCAGGTCCCCAGAGAAAGGCTGTTTGGGCAAACGCCACCGGTaGGTTGAGCCAGTGACCCGGCGTTCCAGCCGAGCTTTGTGCGTG +
Preference number: 6 (lower is better)
Translates to: ESRSPEKGCLGKRHR*VEPVTRRSSRALCV
Trigger: CACGCACAAAGCTCGGCTGGAACGCCGGGTCACTGGCTCAACCAACCGGTGGCGTTTGCCCAAACAGCCTTTCTCTGGGGACCTGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS TCA 72 bp GCTGTTTGGGCAAACGCCACCGGTTGGTTGAGCCAGTaGCCCGGCGTTCCAGCCGAGCTTTGTGCGTGTTCG +
Preference number: 6 (lower is better)
Translates to: AVWANATGWLSQ*PGVPAELCACS
Trigger: CGAACACGCACAAAGCTCGGCTGGAACGCCGGGTCACTGGCTCAACCAACCGGTGGCGTTTGCCCAAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CAA 72 bp TCCCCAGAGAAAGGCTGTTTGGGCAAACGCCACCGGTaGGTTGAGCCAGTGACCCGGCGTTCCAGCCGAGCT +
Preference number: 6 (lower is better)
Translates to: SPEKGCLGKRHR*VEPVTRRSSRA
Trigger: AGCTCGGCTGGAACGCCGGGTCACTGGCTCAACCAACCGGTGGCGTTTGCCCAAACAGCCTTTCTCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS GCA 72 bp CGCAGCACCTCCAGATCCTTGCCTTTGGTGATGCCGTaGAGACGCAAGCAGAGGAAGAGCGGCCTCAAGCTC +
Preference number: 6 (lower is better)
Translates to: RSTSRSLPLVMP*RRKQRKSGLKL
Trigger: GAGCTTGAGGCCGCTCTTCCTCTGCTTGCGTCTGCACGGCATCACCAAAGGCAAGGATCTGGAGGTGCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS GCA 72 bp CAGGGCCTCTGCTCTGATCTCATACTTCACCAGGCGTaGCGCTCGCAGGCTGACGTGGTTGTGCTCGTAGAC +
Preference number: 6 (lower is better)
Translates to: QGLCSDLILHQA*RSQADVVVLVD
Trigger: GTCTACGAGCACAACCACGTCAGCCTGCGAGCGGCACGCCTGGTGAAGTATGAGATCAGAGCAGAGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260723.6
ENST00000495370.2
CDS GCA 72 bp CCTGAACTCCTGCCACTTGCCGTCAACCAGGGCCTCTaGTCTGATCTCATACTTCACCAGGCGTGCCGCTCG +
Preference number: 6 (lower is better)
Translates to: PELLPLAVNQGL*SDLILHQACRS
Trigger: CGAGCGGCACGCCTGGTGAAGTATGAGATCAGAGCAGAGGCCCTGGTTGACGGCAAGTGGCAGGAGTTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CCA 72 bp ACTCCCATCACACTGGCCTCTGAGTTACAGGAGAGCTaGGGGCGCCTTCTGAGCCTGAAGCCTGGAAGCGCT +
Preference number: 6 (lower is better)
Translates to: TPITLASELQES*GRLLSLKPGSA
Trigger: AGCGCTTCCAGGCTTCAGGCTCAGAAGGCGCCCCCAGCTCTCCTGTAACTCAGAGGCCAGTGTGATGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS TCA 72 bp TGTGCTGAGTGGAGGAACTCCCATCACACTGGCCTCTaGGTTACAGGAGAGCTGGGGGCGCCTTCTGAGCCT +
Preference number: 6 (lower is better)
Translates to: CAEWRNSHHTGL*VTGELGAPSEP
Trigger: AGGCTCAGAAGGCGCCCCCAGCTCTCCTGTAACTCAGAGGCCAGTGTGATGGGAGTTCCTCCACTCAGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS TCA 72 bp AGAGAAAGGCTGTTTGGGCAAACGCCACCGGTTGGTTaGGCCAGTGACCCGGCGTTCCAGCCGAGCTTTGTG +
Preference number: 6 (lower is better)
Translates to: RERLFGQTPPVG*ASDPAFQPSFV
Trigger: CACAAAGCTCGGCTGGAACGCCGGGTCACTGGCTCAACCAACCGGTGGCGTTTGCCCAAACAGCCTTTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CCA 72 bp CTTCTGAGCCTGAAGCCTGGAAGCGCTCATCACATCTaGGGCTCCCCCTTTTCTTCTTATGGGCCAAGGTGC +
Preference number: 6 (lower is better)
Translates to: LLSLKPGSAHHI*GSPFSSYGPRC
Trigger: GCACCTTGGCCCATAAGAAGAAAAGGGGGAGCCCCAGATGTGATGAGCGCTTCCAGGCTTCAGGCTCAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS TCA 72 bp CTATCATCACATCCACGCACCTTTGAAACAGGCCACTaGACTGGAGGATGTGGGCGGAAGCCAGCACTCCCA +
Preference number: 6 (lower is better)
Translates to: LSSHPRTFETGH*TGGCGRKPALP
Trigger: TGGGAGTGCTGGCTTCCGCCCACATCCTCCAGTTCAGTGGCCTGTTTCAAAGGTGCGTGGATGTGATGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS TCA 72 bp CAGACTGAAAAAGCTGGGGCTGATGGAGCTCCCATTTaGAGCCCAGGCACTCGAGAATCACATCTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: QTEKAGADGAPI*SPGTRESHLLP
Trigger: GGGAAGCAGATGTGATTCTCGAGTGCCTGGGCTTCAAATGGGAGCTCCATCAGCCCCAGCTTTTTCAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS TCA 72 bp TGCGTGGTAATGGTTGACTGTAACCTGGTCGAGCCATaGCTCTGGGAAGAAGTTAAGGTGCCGCAGCACCTC +
Preference number: 6 (lower is better)
Translates to: CVVMVDCNLVEP*LWEEVKVPQHL
Trigger: GAGGTGCTGCGGCACCTTAACTTCTTCCCAGAGTCATGGCTCGACCAGGTTACAGTCAACCATTACCACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS GCA 72 bp CCAAACTTCTGCTTGATCTGGTTTGTCCTGAACTCCTaGCACTTGCCGTCAACCAGGGCCTCTGCTCTGATC +
Preference number: 6 (lower is better)
Translates to: PNFCLIWFVLNS*HLPSTRASALI
Trigger: GATCAGAGCAGAGGCCCTGGTTGACGGCAAGTGGCAGGAGTTCAGGACAAACCAGATCAAGCAGAAGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CCA 72 bp CCAAATCTCACAGCCTGGGTGTTAAGATCTTTCAGGTaGACCATGTCGCCCCCATTCTCCAGTGTGTCTGGC +
Preference number: 6 (lower is better)
Translates to: PNLTAWVLRSFR*TMSPPFSSVSG
Trigger: GCCAGACACACTGGAGAATGGGGGCGACATGGTCCACCTGAAAGATCTTAACACCCAGGCTGTGAGATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495370.2
CDS CCA 72 bp CTTGCAGCCGGCCTCGTAGAATTTCTTGATGGTGCTTaGCTTGAGTCTGGCTATCATCACATCCACGCACCT +
Preference number: 6 (lower is better)
Translates to: LAAGLVEFLDGA*LESGYHHIHAP
Trigger: AGGTGCGTGGATGTGATGATAGCCAGACTCAAGCCAAGCACCATCAAGAAATTCTACGAGGCCGGCTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CAA 90 bp AAGGTATGGCTTTTGCAGGATGACGTGGTCAACCCAAACTTCTGCTaGATCTGGTTTGTCCTGAACTCCTGCCACTTGCCGTCAACCAGG +
Preference number: 6 (lower is better)
Translates to: KVWLLQDDVVNPNFC*IWFVLNSCHLPSTR
Trigger: CCTGGTTGACGGCAAGTGGCAGGAGTTCAGGACAAACCAGATCAAGCAGAAGTTTGGGTTGACCACGTCATCCTGCAAAAGCCATACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CCA 72 bp TTCTCCTGGTTAAAGAGCAGCCCAAATCTCACAGCCTaGGTGTTAAGATCTTTCAGGTGGACCATGTCGCCC +
Preference number: 6 (lower is better)
Translates to: FSWLKSSPNLTA*VLRSFRWTMSP
Trigger: GGGCGACATGGTCCACCTGAAAGATCTTAACACCCAGGCTGTGAGATTTGGGCTGCTCTTTAACCAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260723.6
ENST00000495370.2
CDS CAA 72 bp GCCGTGGCGAAGGCGACTTTAGTGACCAGTGGGTCATaGATCTTCAAGGAAATGATGATCCTCTTTGCAGGG +
Preference number: 6 (lower is better)
Translates to: AVAKATLVTSGS*IFKEMMILFAG
Trigger: CCCTGCAAAGAGGATCATCATTTCCTTGAAGATCAATGACCCACTGGTCACTAAAGTCGCCTTCGCCACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CAA 72 bp CTTTTGCAGGATGACGTGGTCAACCCAAACTTCTGCTaGATCTGGTTTGTCCTGAACTCCTGCCACTTGCCG +
Preference number: 6 (lower is better)
Translates to: LLQDDVVNPNFC*IWFVLNSCHLP
Trigger: CGGCAAGTGGCAGGAGTTCAGGACAAACCAGATCAAGCAGAAGTTTGGGTTGACCACGTCATCCTGCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS GCA 72 bp ACCTGTCTGGGTTCCTCAAAGCTTCCTCAAAGTCTATaGTCAGAGCCTTGCACATCTGGGAAAGTGAGAGCA +
Preference number: 6 (lower is better)
Translates to: TCLGSSKLPQSL*SEPCTSGKVRA
Trigger: TGCTCTCACTTTCCCAGATGTGCAAGGCTCTGAGCATAGACTTTGAGGAAGCTTTGAGGAACCCAGACAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CCA 72 bp CTTCAGGGCCGTGGCGAAGGCGACTTTAGTGACCAGTaGGTCATTGATCTTCAAGGAAATGATGATCCTCTT +
Preference number: 6 (lower is better)
Translates to: LQGRGEGDFSDQ*VIDLQGNDDPL
Trigger: AAGAGGATCATCATTTCCTTGAAGATCAATGACCCACTGGTCACTAAAGTCGCCTTCGCCACGGCCCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CAA 72 bp TCACTAAAGGTAAATAACCTGGGGGACTTCAGCACTTaGTGGAGCAGGTCCTGTGGGATTTTGTGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: SLKVNNLGDFST*WSRSCGILWRW
Trigger: CCACCTCCACAAAATCCCACAGGACCTGCTCCACAAAGTGCTGAAGTCCCCCAGGTTATTTACCTTTAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CAA 90 bp TTCTTCAGGGCCGTGGCGAAGGCGACTTTAGTGACCAGTGGGTCATaGATCTTCAAGGAAATGATGATCCTCTTTGCAGGGGATTTTTCT +
Preference number: 6 (lower is better)
Translates to: FFRAVAKATLVTSGS*IFKEMMILFAGDFS
Trigger: AGAAAAATCCCCTGCAAAGAGGATCATCATTTCCTTGAAGATCAATGACCCACTGGTCACTAAAGTCGCCTTCGCCACGGCCCTGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS TCA 72 bp CAGCCGAGCTTTGTGCGTGTTCGACATTATCATGAATaGAAGTGGAAATTACGCAGGAGAGAAAAGACAAGC +
Preference number: 6 (lower is better)
Translates to: QPSFVRVRHYHE*KWKLRRREKTS
Trigger: GCTTGTCTTTTCTCTCCTGCGTAATTTCCACTTTCATTCATGATAATGTCGAACACGCACAAAGCTCGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS TCA 72 bp GTTCCAGCCGAGCTTTGTGCGTGTTCGACATTATCATaGATGAAAGTGGAAATTACGCAGGAGAGAAAAGAC +
Preference number: 6 (lower is better)
Translates to: VPAELCACSTLS*MKVEITQERKD
Trigger: GTCTTTTCTCTCCTGCGTAATTTCCACTTTCATTCATGATAATGTCGAACACGCACAAAGCTCGGCTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS TCA 72 bp CACAGTTTGGATTTTCAAGGTATGGCTTTTGCAGGATaGCGTGGTCAACCCAAACTTCTGCTTGATCTGGTT +
Preference number: 6 (lower is better)
Translates to: HSLDFQGMAFAG*RGQPKLLLDLV
Trigger: AACCAGATCAAGCAGAAGTTTGGGTTGACCACGTCATCCTGCAAAAGCCATACCTTGAAAATCCAAACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CCA 72 bp TCTGAGCAGTCTCACATGGGAAATAAAATGTGTGCATaGGGCAGAGATGATCACAGTCACAAAATCAAGAGC +
Preference number: 6 (lower is better)
Translates to: SEQSHMGNKMCA*GRDDHSHKIKS
Trigger: GCTCTTGATTTTGTGACTGTGATCATCTCTGCCCCATGCACACATTTTATTTCCCATGTGAGACTGCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495370.2
CDS CAA 90 bp CATCACGGTTTCATAAGTCGGAATTGCCTGAATCTTGTAGTTCAGTaGCAAGAAGACCCACAAAAGCATTGTTTTCAGAAGATGGAATTC +
Preference number: 6 (lower is better)
Translates to: HHGFISRNCLNLVVQ*QEDPQKHCFQKMEF
Trigger: GAATTCCATCTTCTGAAAACAATGCTTTTGTGGGTCTTCTTGCAACTGAACTACAAGATTCAGGCAATTCCGACTTATGAAACCGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS CAA 90 bp CACTCGAGAATCACATCTGCTTCCCCACTTTGGATGTCCTTGTTCTaGAAATTCTCAAAGAAAAACTTCTGGATTTGTGAAATGCATAAC +
Preference number: 6 (lower is better)
Translates to: HSRITSASPLWMSLF*KFSKKNFWICEMHN
Trigger: GTTATGCATTTCACAAATCCAGAAGTTTTTCTTTGAGAATTTCAAGAACAAGGACATCCAAAGTGGGGAAGCAGATGTGATTCTCGAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260723.6
CDS GCA 72 bp GGAAAATCCCATAGATTCTTCTGGAAACTGTCAAGATaGTGGGAAGATGAATGCAAAACTTACATAGATTGG +
Preference number: 6 (lower is better)
Translates to: GKSHRFFWKLSR*WEDECKTYIDW
Trigger: CCAATCTATGTAAGTTTTGCATTCATCTTCCCAGCATCTTGACAGTTTCCAGAAGAATCTATGGGATTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260723.6