RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BTBD11 (Homo sapiens)

Ensembl gene IDs: ENSG00000151136

Ensembl transcript IDs: ENST00000280758.10, ENST00000357167.8, ENST00000415943.6, ENST00000420571.6, ENST00000490090.6, ENST00000494235.2, ENST00000550706.5

Found 728 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATTGGGTTTCACTCAGTGGCTACTAAAAGCAGTCAGGCAAGCAAGTaGACTAGCACCCCAGCCTGCCAGGGAAGGTCTCTGATGAGAAGC +
Preference number: 1 (lower is better)
Translates to: IGFHSVATKSSQASK*TSTPACQGRSLMRS
Trigger: GCTTCTCATCAGAGACCTTCCCTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCACTGAGTGAAACCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR TCA 90 bp CAGATATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTaGCATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACAG +
Preference number: 1 (lower is better)
Translates to: QISPRCSMGHAHEAM*HWSSEQWFRELVQQ
Trigger: CTGTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR GCA 90 bp TTCATCCAAATGAAAACCCAACACGGGTCCTTCCAGACACTTCCATaGAGGCTGGTGACCCGAGTTTACAGAAGTGCCACTCACCCAAGG +
Preference number: 1 (lower is better)
Translates to: FIQMKTQHGSFQTLP*RLVTRVYRSATHPR
Trigger: CCTTGGGTGAGTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTGGGTTTTCATTTGGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR TCA 90 bp TTCAGGGTTGGTACGGTGAAGTCCTCCAACTGTCAACCTGGAACCTaGGTGACCTTTAAAAGGCCTCAATCCATTCACTGGACAGTGGTC +
Preference number: 1 (lower is better)
Translates to: FRVGTVKSSNCQPGT*VTFKRPQSIHWTVV
Trigger: GACCACTGTCCAGTGAATGGATTGAGGCCTTTTAAAGGTCACTCAGGTTCCAGGTTGACAGTTGGAGGACTTCACCGTACCAACCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CCA 90 bp TTTGTTTTTCAACAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTaGCCCAGCCAAAAACAGGTGCCAGGTGGAATTTGTCTGTGTTTG +
Preference number: 1 (lower is better)
Translates to: FVFQQEHVGAVEAAP*PSQKQVPGGICLCL
Trigger: CAAACACAGACAAATTCCACCTGGCACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTGTTGAAAAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR TCA 90 bp GGGTTAACTTGGTTGTCCAGTTGCCCATTAAACTCTGGACCCAGCTaGTCTGATCTGCAGACCAGTGGAAAGTCCTTTGTTTTTCAACAG +
Preference number: 1 (lower is better)
Translates to: GLTWLSSCPLNSGPS*SDLQTSGKSFVFQQ
Trigger: CTGTTGAAAAACAAAGGACTTTCCACTGGTCTGCAGATCAGATCAGCTGGGTCCAGAGTTTAATGGGCAACTGGACAACCAAGTTAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR GCA 90 bp CTGTGGGATGCTCAGTTTGAGGAAAGCCAGGAGGAGACTGTAATCTaGCCTCAGCTTCTATATCTTGGAAGAACAGACAGTGTTGTGATT +
Preference number: 1 (lower is better)
Translates to: LWDAQFEESQEETVI*PQLLYLGRTDSVVI
Trigger: AATCACAACACTGTCTGTTCTTCCAAGATATAGAAGCTGAGGGCAGATTACAGTCTCCTCCTGGCTTTCCTCAAACTGAGCATCCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR TCA 90 bp AACTTGGTTGTCCAGTTGCCCATTAAACTCTGGACCCAGCTGATCTaGTCTGCAGACCAGTGGAAAGTCCTTTGTTTTTCAACAGGAACA +
Preference number: 1 (lower is better)
Translates to: NLVVQLPIKLWTQLI*SADQWKVLCFSTGT
Trigger: TGTTCCTGTTGAAAAACAAAGGACTTTCCACTGGTCTGCAGATCAGATCAGCTGGGTCCAGAGTTTAATGGGCAACTGGACAACCAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CCA 90 bp GATTATTTCCTCATTATTGGTCACAGCCTCACCAATTTGCTACCATaGTTGACGTTTGCTGAAGCACAGCTACCAAGGTCCTTAATGTGT +
Preference number: 1 (lower is better)
Translates to: DYFLIIGHSLTNLLP*LTFAEAQLPRSLMC
Trigger: ACACATTAAGGACCTTGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTGACCAATAATGAGGAAATAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR TCA 90 bp ATGTATCTAGGTTTCAAATTAAAGAACGAGAAGAAAGGCCGCAACTaGAAAGTTATCTGGAATACTGTGGCACTTTACCAATCTCTTTTG +
Preference number: 1 (lower is better)
Translates to: MYLGFKLKNEKKGRN*KVIWNTVALYQSLL
Trigger: CAAAAGAGATTGGTAAAGTGCCACAGTATTCCAGATAACTTTTCAGTTGCGGCCTTTCTTCTCGTTCTTTAATTTGAAACCTAGATACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGTTCCATGCAGGCTGGTaGCCCGAGTTTACAGAAGTG +
Preference number: 2 (lower is better)
Translates to: VATKSSQASKCTSTPACQFHAGW*PEFTEV
Trigger: CACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAA...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR-3UTR CCA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCAGTGGTCCCCGGCAGTaGGTGTTCAATGGTCCTAGG +
Preference number: 2 (lower is better)
Translates to: GWGRFANDHVEERPCVSASGPRQ*VFNGPR
Trigger: CCTAGGACCATTGAACACCCACTGCCGGGGACCACT...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCCACCCAGATGCTCCATaGGCCATGCCCATGAAGCGA +
Preference number: 2 (lower is better)
Translates to: GWGRFANDHVEERPCVSAHPDAP*AMPMKR
Trigger: TCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTG...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR GCA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGCCAGCTGATCTGATCTaGAGACCAGTGGAAAGTCCT +
Preference number: 2 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGPADLI*RPVESP
Trigger: AGGACTTTCCACTGGTCTGCAGATCAGATCAGCTGG...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR GCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGAATTCTCTGACGTGCTaGCCCCCTCCCCCATTCAGC +
Preference number: 2 (lower is better)
Translates to: GRFANDHVEERPCVSASQNSLTC*PPPPFS
Trigger: GCTGAATGGGGGAGGGGGGCAGCACGTCAGAGAATT...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTAACTCTGGACCCAGCTaGTCTGATCTGCAGACCAGT +
Preference number: 2 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPNSGPS*SDLQTS
Trigger: ACTGGTCTGCAGATCAGATCAGCTGGGTCCAGAGTT...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGACCCAGCTGATCTaGTCTGCAGACCAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQWTQLI*SADQWK
Trigger: TTTCCACTGGTCTGCAGATCAGATCAGCTGGGTCCA...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATTCAGGGTTGGTACGGTaGAGTCCTCCAACTGTCAAC +
Preference number: 2 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNSGLVR*SPPTVN
Trigger: GTTGACAGTTGGAGGACTTCACCGTACCAACCCTGA...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR GCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGAGTCAGGCAAGCAAGTaGACTAGCACCCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRSQASK*TSTPAC
Trigger: GCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACT...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR-3UTR CCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCACCTCAATCCATTCACTaGACAGTGGTCCCCGGCAGT +
Preference number: 2 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPPQSIH*TVVPGS
Trigger: ACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGG...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTCAGGCGTGGGCTTCATaGCTGTGGGATGCTCAGTTT +
Preference number: 2 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTQAWAS*LWDAQF
Trigger: AAACTGAGCATCCCACAGTCATGAAGCCCACGCCTG...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR-3UTR GCA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAACCAGCTGATCTGATCTaGAGACCAGTGGAAAGTCCT +
Preference number: 2 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQPADLI*RPVESP
Trigger: AGGACTTTCCACTGGTCTGCAGATCAGATCAGCTGG...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTCCATTCACTGGACAGTaGTCCCCGGCAGTGGGTGTT +
Preference number: 2 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSPFTGQ*SPAVGV
Trigger: AACACCCACTGCCGGGGACCACTGTCCAGTGAATGG...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp CTGTACAAATCAATGCCTGGAGGCCCTGAACTAGCATTAGACATTCACAGGGAACACCCAGATGCTCCATaGGCCATGCCCATGAAGCGA +
Preference number: 2 (lower is better)
Translates to: LYKSMPGGPELALDIHREHPDAP*AMPMKR
Trigger: TCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTG...TTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CAA 90 bp CTTTGTTTTTCAACAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTaGGCCCAGCCAAAAACAGGTGCCAGGTGGAATTTGTCTGTGTTT +
Preference number: 2 (lower is better)
Translates to: LCFSTGTRGSSRGSS*AQPKTGARWNLSVF
Trigger: AAACACAGACAAATTCCACCTGGCACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTGTTGAAAAACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR GCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATCCAGCCAAAAACAGGTaGCAGGTGGAATTTGTCTGT +
Preference number: 2 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNPAKNR*QVEFVC
Trigger: ACAGACAAATTCCACCTGGCACCTGTTTTTGGCTGG...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR GCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGACTTGGTTGTCCAGTTaGCCATTAAACTCTGGACCC +
Preference number: 2 (lower is better)
Translates to: GRFANDHVEERPCVSASQTWLSS*PLNSGP
Trigger: GGGTCCAGAGTTTAATGGGCAACTGGACAACCAAGT...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATTCACAATCTAGGGTCTaGCACAACTTCCTGAAGGCA +
Preference number: 2 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNSQSRV*HNFLKA
Trigger: TGCCTTCAGGAAGTTGTGCCAGACCCTAGATTGTGA...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCACAACAGAAGAACAGTaGGTCCTTCACAATCTAGGG +
Preference number: 2 (lower is better)
Translates to: GWGRFANDHVEERPCVSATTEEQ*VLHNLG
Trigger: CCCTAGATTGTGAAGGACCCACTGTTCTTCTGTTGT...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CAA 90 bp AGGAGGAAGGTGACAGCCGCAATGCACACGCTGTGTATCTGTAGCTaGGACTCTTCTTCAGGCAGTTCTTGTTTTCCTTCCACATTGGAT +
Preference number: 2 (lower is better)
Translates to: RRKVTAAMHTLCICS*DSSSGSSCFPSTLD
Trigger: ATCCAATGTGGAAGGAAAACAAGAACTGCCTGAAGAAGAGTCCAAGCTACAGATACACAGCGTGTGCATTGCGGCTGTCACCTTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTTGGACCCAGCTGATCTaGTCTGCAGACCAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSWTQLI*SADQWK
Trigger: TTTCCACTGGTCTGCAGATCAGATCAGCTGGGTCCA...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp GGGTGTTTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTAACTCTGGACCCAGCTaGTCTGATCTGCAGACCAGT +
Preference number: 2 (lower is better)
Translates to: GCFILTPKPRLACRLLSTNSGPS*SDLQTS
Trigger: ACTGGTCTGCAGATCAGATCAGCTGGGTCCAGAGTT...AGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAAACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCATGTCAACCTGGAACCTaGGTGACCTTTAAAAGGCCT +
Preference number: 2 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPCQPGT*VTFKRP
Trigger: AGGCCTTTTAAAGGTCACTCAGGTTCCAGGTTGACA...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR GCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCACTAGCACCCCAGCCTaGCAGGGAAGGTCTCTGATG +
Preference number: 2 (lower is better)
Translates to: TSSRIFPDDITINASAVATSTPA*QGRSLM
Trigger: CATCAGAGACCTTCCCTGGCAGGCTGGGGTGCTAGT...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR-3UTR CCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTATGCGGCAGGAGAACTaGAAAGTTCCCGGGAAGCAT +
Preference number: 2 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSMRQEN*KVPGKH
Trigger: ATGCTTCCCGGGAACTTTCCAGTTCTCCTGCCGCAT...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTATGGTTGACGTTTGCTaGAGCACAGCTACCAAGGTC +
Preference number: 2 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSMVDVC*STATKV
Trigger: GACCTTGGTAGCTGTGCTTCAGCAAACGTCAACCAT...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp CTGTACAAATCAATGCCTGGAGGCCCTGAACTAGCATTAGACATTCACAGGGAAGTGACATTGGTCCTCTaGACAATGGTTCAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: LYKSMPGGPELALDIHREVTLVL*TMVQGA
Trigger: AGCTCCCTGAACCATTGTTCAGAGGACCAATGTCAC...TTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp ATGAAGCGATGTGACATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACTCACAATCTAGGGTCTaGCACAACTTCCTGAAGGCA +
Preference number: 2 (lower is better)
Translates to: MKRCDIGPLNNGSGSSYNSQSRV*HNFLKA
Trigger: TGCCTTCAGGAAGTTGTGCCAGACCCTAGATTGTGA...GTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR GCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTAAACCACGATTAGCATaGAGGTTGCTTTCAACTATT +
Preference number: 2 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPKPRLA*RLLSTI
Trigger: AATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTT...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR GCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCTTCCAGACACTTCCATaGAGGCTGGTGACCCGAGTT +
Preference number: 2 (lower is better)
Translates to: TSSRIFPDDITINASAVAFQTLP*RLVTRV
Trigger: AACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAA...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR-3UTR CCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCAAAAACAGGTGCCAGGTaGAATTTGTCTGTGTTTGTG +
Preference number: 2 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPKTGAR*NLSVFV
Trigger: CACAAACACAGACAAATTCCACCTGGCACCTGTTTT...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp GGGTGTTTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTCAATCTCTTCAGGGTTaGTACGGTGAAGTCCTCCAA +
Preference number: 2 (lower is better)
Translates to: GCFILTPKPRLACRLLSTQSLQG*YGEVLQ
Trigger: TTGGAGGACTTCACCGTACCAACCCTGAAGAGATTG...AGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAAACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCATGTTTACACAGTGTaGACCTGTGACTTACTATTT +
Preference number: 2 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPHVYTV*TCDLLF
Trigger: AAATAGTAAGTCACAGGTCCACACTGTGTAAACATG...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTTTTGCTTATAATATATaGCAGAGCCAACGAAACCCT +
Preference number: 2 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPFAYNI*QSQRNP
Trigger: AGGGTTTCGTTGGCTCTGCCATATATTATAAGCAAA...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATTTTGCTTATAATATATaGCAGAGCCAACGAAACCCT +
Preference number: 2 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNFAYNI*QSQRNP
Trigger: AGGGTTTCGTTGGCTCTGCCATATATTATAAGCAAA...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CAA 90 bp AATTTGCCAGATTATTTCCTCATTATTGGTCACAGCCTCACCAATTaGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCAAGGTCC +
Preference number: 2 (lower is better)
Translates to: NLPDYFLIIGHSLTN*LPWLTFAEAQLPRS
Trigger: GGACCTTGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTGACCAATAATGAGGAAATAATCTGGCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp ATGAAGCGATGTGACATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACAAGAAAGGCCGCAACTaGAAAGTTATCTGGAATACT +
Preference number: 2 (lower is better)
Translates to: MKRCDIGPLNNGSGSSYNKKGRN*KVIWNT
Trigger: AGTATTCCAGATAACTTTTCAGTTGCGGCCTTTCTT...GTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp CTGTACAAATCAATGCCTGGAGGCCCTGAACTAGCATTAGACATTCACAGGGAAAAAACAGGTGCCAGGTaGAATTTGTCTGTGTTTGTG +
Preference number: 2 (lower is better)
Translates to: LYKSMPGGPELALDIHREKTGAR*NLSVFV
Trigger: CACAAACACAGACAAATTCCACCTGGCACCTGTTTT...TTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp CTGTACAAATCAATGCCTGGAGGCCCTGAACTAGCATTAGACATTCACAGGGAACAATTGGGGTTAACTTaGTTGTCCAGTTGCCCATTA +
Preference number: 2 (lower is better)
Translates to: LYKSMPGGPELALDIHREQLGLT*LSSCPL
Trigger: TAATGGGCAACTGGACAACCAAGTTAACCCCAATTG...TTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTTCAGGGTTGGTACGGTaGAGTCCTCCAACTGTCAAC +
Preference number: 2 (lower is better)
Translates to: AVHLFCVIMITKARLFQLSGLVR*SPPTVN
Trigger: GTTGACAGTTGGAGGACTTCACCGTACCAACCCTGA...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCAAGTCTTCATCCAAATaGAAACCCAACACGGGTCCT +
Preference number: 2 (lower is better)
Translates to: TSSRIFPDDITINASAVAKSSSK*KPNTGP
Trigger: AGGACCCGTGTTGGGTTTTCATTTGGATGAAGACTT...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR-3UTR CCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTATGCGGCAGGAGAACTaGAAAGTTCCCGGGAAGCAT +
Preference number: 2 (lower is better)
Translates to: AVHLFCVIMITKARLFQLMRQEN*KVPGKH
Trigger: ATGCTTCCCGGGAACTTTCCAGTTCTCCTGCCGCAT...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACCCTCAATCCATTCACTaGACAGTGGTCCCCGGCAGT +
Preference number: 2 (lower is better)
Translates to: NNPVLYTLRIQKESILSYPQSIH*TVVPGS
Trigger: ACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGG...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp ATGAAGCGATGTGACATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACTTTATCAACAAAACTTaGCTGTCCCCAAGGGTAAAA +
Preference number: 2 (lower is better)
Translates to: MKRCDIGPLNNGSGSSYNFINKT*LSPRVK
Trigger: TTTTACCCTTGGGGACAGCCAAGTTTTGTTGATAAA...GTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CAA 90 bp TATTTCCTCATTATTGGTCACAGCCTCACCAATTTGCTACCATGGTaGACGTTTGCTGAAGCACAGCTACCAAGGTCCTTAATGTGTAAT +
Preference number: 2 (lower is better)
Translates to: YFLIIGHSLTNLLPW*TFAEAQLPRSLMCN
Trigger: ATTACACATTAAGGACCTTGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTGACCAATAATGAGGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTGAAAACCTGGAACCTGAGTaGCCTTTAAAAGGCCTCAAT +
Preference number: 2 (lower is better)
Translates to: FILTPKPRLACRLLSTIENLEPE*PLKGLN
Trigger: ATTGAGGCCTTTTAAAGGTCACTCAGGTTCCAGGTT...TTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTATGGTTGACGTTTGCTaGAGCACAGCTACCAAGGTC +
Preference number: 2 (lower is better)
Translates to: AVHLFCVIMITKARLFQLMVDVC*STATKV
Trigger: GACCTTGGTAGCTGTGCTTCAGCAAACGTCAACCAT...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTATTCAGCATCATCTATaGACACATTTCTGCAAAAGC +
Preference number: 2 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSIQHHL*THFCKS
Trigger: GCTTTTGCAGAAATGTGTTCATAGATGATGCTGAAT...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR GCA 90 bp GGGTGTTTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTCAGTATCTTATCAGATaGATGTTTACACAGTGTGGA +
Preference number: 2 (lower is better)
Translates to: GCFILTPKPRLACRLLSTQYLIR*MFTQCG
Trigger: TCCACACTGTGTAAACATGCATCTGATAAGATACTG...AGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAAACACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR TCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAATGTCAACCTGGAACCTaGGTGACCTTTAAAAGGCCT +
Preference number: 2 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQCQPGT*VTFKRP
Trigger: AGGCCTTTTAAAGGTCACTCAGGTTCCAGGTTGACA...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR GCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAACCAGCCAAAAACAGGTaGCAGGTGGAATTTGTCTGT +
Preference number: 2 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQPAKNR*QVEFVC
Trigger: ACAGACAAATTCCACCTGGCACCTGTTTTTGGCTGG...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR GCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACACAGGTTCGGGCCCATaGAAATGCATGTTATGTGGG +
Preference number: 2 (lower is better)
Translates to: NNPVLYTLRIQKESILSYTGSGP*KCMLCG
Trigger: CCCACATAACATGCATTTGCATGGGCCCGAACCTGT...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CAA 90 bp TGTTTCACACACACACAAAAATTAGTTGTAAACACCAGCGCACTTTaGTTTACAAATAAGCCCACATCCTCGAGACTAAAACCATCAGAG +
Preference number: 2 (lower is better)
Translates to: CFTHTQKLVVNTSAL*FTNKPTSSRLKPSE
Trigger: CTCTGATGGTTTTAGTCTCGAGGATGTGGGCTTATTTGTAAACAAAAGTGCGCTGGTGTTTACAACTAATTTTTGTGTGTGTGTGAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR-3UTR TCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACAGGATTAATTGGGGGTaGTTTTTGGCTTCTGGTTCA +
Preference number: 2 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNRINWG*FLASGS
Trigger: TGAACCAGAAGCCAAAAATCACCCCCAATTAATCCT...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR-3UTR CCA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTACCAATTTGCTACCATaGTTGACGTTTGCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPTNLLP*LTFAEA
Trigger: TGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGT...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAACATGTTTACACAGTGTaGACCTGTGACTTACTATTT +
Preference number: 2 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQHVYTV*TCDLLF
Trigger: AAATAGTAAGTCACAGGTCCACACTGTGTAAACATG...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR GCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACAAACCACGATTAGCATaGAGGTTGCTTTCAACTATT +
Preference number: 2 (lower is better)
Translates to: NNPVLYTLRIQKESILSYKPRLA*RLLSTI
Trigger: AATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTT...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAATTATTTCCTCATTATTaGTCACAGCCTCACCAATTT +
Preference number: 2 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQLFPHY*SQPHQF
Trigger: AAATTGGTGAGGCTGTGACCAATAATGAGGAAATAA...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACATTAGAGATACTTATTaGCAGTGCACCTCTTTTGTG +
Preference number: 2 (lower is better)
Translates to: NNPVLYTLRIQKESILSYIRDTY*QCTSFV
Trigger: CACAAAAGAGGTGCACTGCCAATAAGTATCTCTAAT...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp GGAAGCAGGCGTGGGCTTCATGACTGTGGGATGCTCAGTTTGAGGAAAGCCAGGAGAAGCCCTTCCTGTTaGGGAGGACTGAGGAGTCAG +
Preference number: 3 (lower is better)
Translates to: GSRRGLHDCGMLSLRKARRSPSC*GGLRSQ
Trigger: CTGACTCCTCAGTCCTCCCAAACAGGAAGGGCTTCT...CCTGGCTTTCCTCAAACTGAGCATCCCACAGTCATGAAGCCCACGCCTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR TCA 72 bp AACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTaGCCCGAGTTTACAGAAGTGCCACTCACCCAAGGG +
Preference number: 3 (lower is better)
Translates to: NTGPSRHFHAGW*PEFTEVPLTQG
Trigger: CCCTTGGGTGAGTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR GCA 72 bp CACTCAGTGGCTACTAAAAGCAGTCAGGCAAGCAAGTaGACTAGCACCCCAGCCTGCCAGGGAAGGTCTCTG +
Preference number: 3 (lower is better)
Translates to: HSVATKSSQASK*TSTPACQGRSL
Trigger: CAGAGACCTTCCCTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCACTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR TCA 72 bp CCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTaGCATTGGTCCTCTGAACAATGGTTCAGGGAGCTC +
Preference number: 3 (lower is better)
Translates to: PRCSMGHAHEAM*HWSSEQWFREL
Trigger: GAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CCA 72 bp GCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTaGGTGTTCAATGGTCCTAGGGGTGCTTTCAATTGG +
Preference number: 3 (lower is better)
Translates to: ASIHSLDSGPRQ*VFNGPRGAFNW
Trigger: CCAATTGAAAGCACCCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR GCA 72 bp ATGAAAACCCAACACGGGTCCTTCCAGACACTTCCATaGAGGCTGGTGACCCGAGTTTACAGAAGTGCCACT +
Preference number: 3 (lower is better)
Translates to: MKTQHGSFQTLP*RLVTRVYRSAT
Trigger: AGTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTGGGTTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR-3UTR CAA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTAACTTGGTTGTCCAGTaGCCCATTAAACTCTGGACC +
Preference number: 3 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPNLVVQ*PIKLWT
Trigger: GGTCCAGAGTTTAATGGGCAACTGGACAACCAAGTT...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CCA 72 bp GCCAATACTGTAGACAGATATCACCCAGATGCTCCATaGGCCATGCCCATGAAGCGATGTGACATTGGTCCT +
Preference number: 3 (lower is better)
Translates to: ANTVDRYHPDAP*AMPMKRCDIGP
Trigger: AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATATCTGTCTACAGTATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCGGAATTTGTCTGTGTTaGTGTAAAGCCAATGCGGCA +
Preference number: 3 (lower is better)
Translates to: GWGRFANDHVEERPCVSAGICLC*CKANAA
Trigger: TGCCGCATTGGCTTTACACAAACACAGACAAATTCC...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCCCAGTGGAAAGTCCTTaGTTTTTCAACAGGAACACG +
Preference number: 3 (lower is better)
Translates to: GWGRFANDHVEERPCVSAPVESP*FFNRNT
Trigger: CGTGTTCCTGTTGAAAAACAAAGGACTTTCCACTGG...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTTTGGGGTTAACTTGGTaGTCCAGTTGCCCATTAAAC +
Preference number: 3 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPLGLTW*SSCPLN
Trigger: GTTTAATGGGCAACTGGACAACCAAGTTAACCCCAA...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTAATTTGCTACCATGGTaGACGTTTGCTGAAGCACAG +
Preference number: 3 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPNLLPW*TFAEAQ
Trigger: CTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATT...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGCACAGCCTCACCAATTaGCTACCATGGTTGACGTTT +
Preference number: 3 (lower is better)
Translates to: GRFANDHVEERPCVSASQHSLTN*LPWLTF
Trigger: AAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGTGTGGGATGCTCAGTTaGAGGAAAGCCAGGAGGAGA +
Preference number: 3 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRCGMLS*RKARRR
Trigger: TCTCCTCCTGGCTTTCCTCAAACTGAGCATCCCACA...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR TCA 72 bp GGTACGGTGAAGTCCTCCAACTGTCAACCTGGAACCTaGGTGACCTTTAAAAGGCCTCAATCCATTCACTGG +
Preference number: 3 (lower is better)
Translates to: GTVKSSNCQPGT*VTFKRPQSIHW
Trigger: CCAGTGAATGGATTGAGGCCTTTTAAAGGTCACTCAGGTTCCAGGTTGACAGTTGGAGGACTTCACCGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CCA 72 bp ACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTaGGTCCTTCACAATCTAGGGTCTGGCACAACTTCC +
Preference number: 3 (lower is better)
Translates to: TMVQGARTTEEQ*VLHNLGSGTTS
Trigger: GGAAGTTGTGCCAGACCCTAGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR TCA 72 bp TGGTTGTCCAGTTGCCCATTAAACTCTGGACCCAGCTaGTCTGATCTGCAGACCAGTGGAAAGTCCTTTGTT +
Preference number: 3 (lower is better)
Translates to: WLSSCPLNSGPS*SDLQTSGKSFV
Trigger: AACAAAGGACTTTCCACTGGTCTGCAGATCAGATCAGCTGGGTCCAGAGTTTAATGGGCAACTGGACAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR TCA 72 bp GGAGTTACCACTGTACAAATCAATGCCTGGAGGCCCTaGACTAGCATTAGACATTCACAGGGAAGTCAGCTG +
Preference number: 3 (lower is better)
Translates to: GVTTVQINAWRP*TSIRHSQGSQL
Trigger: CAGCTGACTTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAGTGGTAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR TCA 72 bp TCAGGAAGGAACAAGAGCCCCAAGTCTTCATCCAAATaGAAACCCAACACGGGTCCTTCCAGACACTTCCAT +
Preference number: 3 (lower is better)
Translates to: SGRNKSPKSSSK*KPNTGPSRHFH
Trigger: ATGGAAGTGTCTGGAAGGACCCGTGTTGGGTTTTCATTTGGATGAAGACTTGGGGCTCTTGTTCCTTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR CCA 72 bp CTCATTATTGGTCACAGCCTCACCAATTTGCTACCATaGTTGACGTTTGCTGAAGCACAGCTACCAAGGTCC +
Preference number: 3 (lower is better)
Translates to: LIIGHSLTNLLP*LTFAEAQLPRS
Trigger: GGACCTTGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTGACCAATAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGGTTTATCAACAAAACTaGGCTGTCCCCAAGGGTAAA +
Preference number: 3 (lower is better)
Translates to: GRFANDHVEERPCVSASQVYQQN*AVPKGK
Trigger: TTTACCCTTGGGGACAGCCAAGTTTTGTTGATAAAC...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp ATGAAGCGATGTGACATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACGGAATTTGTCTGTGTTaGTGTAAAGCCAATGCGGCA +
Preference number: 3 (lower is better)
Translates to: MKRCDIGPLNNGSGSSYNGICLC*CKANAA
Trigger: TGCCGCATTGGCTTTACACAAACACAGACAAATTCC...GTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp GGGTGTTTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTCACAGCCTCACCAATTaGCTACCATGGTTGACGTTT +
Preference number: 3 (lower is better)
Translates to: GCFILTPKPRLACRLLSTHSLTN*LPWLTF
Trigger: AAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG...AGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAAACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTATTATTTCCTCATTATaGGTCACAGCCTCACCAATT +
Preference number: 3 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPIISSL*VTASPI
Trigger: AATTGGTGAGGCTGTGACCAATAATGAGGAAATAAT...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR TCA 72 bp GTCCAGTTGCCCATTAAACTCTGGACCCAGCTGATCTaGTCTGCAGACCAGTGGAAAGTCCTTTGTTTTTCA +
Preference number: 3 (lower is better)
Translates to: VQLPIKLWTQLI*SADQWKVLCFS
Trigger: TGAAAAACAAAGGACTTTCCACTGGTCTGCAGATCAGATCAGCTGGGTCCAGAGTTTAATGGGCAACTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR GCA 72 bp GCTCAGTTTGAGGAAAGCCAGGAGGAGACTGTAATCTaGCCTCAGCTTCTATATCTTGGAAGAACAGACAGT +
Preference number: 3 (lower is better)
Translates to: AQFEESQEETVI*PQLLYLGRTDS
Trigger: ACTGTCTGTTCTTCCAAGATATAGAAGCTGAGGGCAGATTACAGTCTCCTCCTGGCTTTCCTCAAACTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR-3UTR CAA 90 bp GGGTGTTTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTTCAATTGGGGTTAACTaGGTTGTCCAGTTGCCCATT +
Preference number: 3 (lower is better)
Translates to: GCFILTPKPRLACRLLSTSIGVN*VVQLPI
Trigger: AATGGGCAACTGGACAACCAAGTTAACCCCAATTGA...AGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAAACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTCAATGCCAGTTAAAATaGGGTTTCACTCAGTGGCTA +
Preference number: 3 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTQCQLK*GFTQWL
Trigger: TAGCCACTGAGTGAAACCCAATTTTAACTGGCATTG...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR GCA 72 bp AGGTTTCACAGAATAGGAAGAAAGGATAAGTGGGCCTaGAGTGAATACATAGTCCTATTGGCGATCACTGTG +
Preference number: 3 (lower is better)
Translates to: RFHRIGRKDKWA*SEYIVLLAITV
Trigger: CACAGTGATCGCCAATAGGACTATGTATTCACTGCAGGCCCACTTATCCTTTCTTCCTATTCTGTGAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR-3UTR CAA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTCCAGTGGAAAGTCCTTaGTTTTTCAACAGGAACACG +
Preference number: 3 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPPVESP*FFNRNT
Trigger: CGTGTTCCTGTTGAAAAACAAAGGACTTTCCACTGG...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAATTGGGGTTAACTTGGTaGTCCAGTTGCCCATTAAAC +
Preference number: 3 (lower is better)
Translates to: LAVHLFCVIMITKARLFQLGLTW*SSCPLN
Trigger: GTTTAATGGGCAACTGGACAACCAAGTTAACCCCAA...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR TCA 72 bp GAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTaGATTAGAGATACTTATTGGCAGTGCACCTCTTTT +
Preference number: 3 (lower is better)
Translates to: ETTISMQVAFNY*IRDTYWQCTSF
Trigger: AAAAGAGGTGCACTGCCAATAAGTATCTCTAATTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAAATTATTTCCTCATTATaGGTCACAGCCTCACCAATT +
Preference number: 3 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQIISSL*VTASPI
Trigger: AATTGGTGAGGCTGTGACCAATAATGAGGAAATAAT...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR-3UTR CAA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACCGATTAGCATGCAGGTaGCTTTCAACTATTGAATTA +
Preference number: 3 (lower is better)
Translates to: NNPVLYTLRIQKESILSYRLACR*LSTIEL
Trigger: TAATTCAATAGTTGAAAGCAACCTGCATGCTAATCG...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR GCA 72 bp TCAACTTGTTTAGAATATCAGCAGTATCTTATCAGATaGATGTTTACACAGTGTGGACCTGTGACTTACTAT +
Preference number: 3 (lower is better)
Translates to: STCLEYQQYLIR*MFTQCGPVTYY
Trigger: ATAGTAAGTCACAGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACAAGTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CCA 72 bp TGTGGCACTTTACCAATCTCTTTTGCTTATAATATATaGCAGAGCCAACGAAACCCTGTTGATATAAACTTT +
Preference number: 3 (lower is better)
Translates to: CGTLPISFAYNI*QSQRNPVDINF
Trigger: AAAGTTTATATCAACAGGGTTTCGTTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGAGCCGCGAGCAGTGCTaGCCGGCGCAGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVSREQC*PAQSSP
Trigger: GGGGCTGGACTGCGCCGGCCAGCACTGCTCGCGGCT...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR TCA 90 bp GGAAGCAGGCGTGGGCTTCATGACTGTGGGATGCTCAGTTTGAGGAAAGCCAGGGGCCCACGGAGAAGGTaGGGCCGCAGCGGGCCGACT +
Preference number: 4 (lower is better)
Translates to: GSRRGLHDCGMLSLRKARGPRRR*GRSGPT
Trigger: AGTCGGCCCGCTGCGGCCTCACCTTCTCCGTGGGCC...CCTGGCTTTCCTCAAACTGAGCATCCCACAGTCATGAAGCCCACGCCTGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGGCAGCCGCCGTACAGTaGGCGGCCAGGCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGAAAVQ*AARPQD
Trigger: GTCCTGGGGCCTGGCCGCGCACTGTACGGCGGCTGC...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGAGTCCGGGCCGGAGCTaGGCGCAATGGGGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVSPGRS*AQWGAS
Trigger: GCTCGCTCCCCATTGCGCCCAGCTCCGGCCCGGACT...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGAGCTGCTGCCCCCGCTaGCGCTGCTGGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGSCCPR*RCWLRC
Trigger: GCAGCGCAGCCAGCAGCGCCAGCGGGGGCAGCAGCT...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGAGCAGCCGCGAGCAGTaGTGGCCGGCGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQSSREQ*WPAQSS
Trigger: GCTGGACTGCGCCGGCCAGCACTGCTCGCGGCTGCT...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAGCAGCCGCCGTACAGTaGGCGGCCAGGCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRAAAVQ*AARPQD
Trigger: GTCCTGGGGCCTGGCCGCGCACTGTACGGCGGCTGC...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACAGCTGCTGCCCCCGCTaGCGCTGCTGGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHSCCPR*RCWLRC
Trigger: GCAGCGCAGCCAGCAGCGCCAGCGGGGGCAGCAGCT...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGCCAGGGTCTCCACGGTaGACTTGGGCGCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVPGSPR*TWAPRG
Trigger: TCCACGAGGCGCCCAAGTTCACCGTGGAGACCCTGG...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGACCCAGGGCCACTaGAGCTCCGGGGCACCCCGG +
Preference number: 4 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPLTQGH*SSGAPR
Trigger: CCGGGGTGCCCCGGAGCTGCAGTGGCCCTGGGTCAG...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGAGCGCCTCCAGCTCCTaGAGAGTCCAGGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVSASSS*RVQGTS
Trigger: CGAGGTCCCCTGGACTCTCCAGGAGCTGGAGGCGCT...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACTCGTCGGCCCTGAGCTaGCGCGGCTCGCAGTCCACG +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHSSALS*RGSQST
Trigger: CGTGGACTGCGAGCCGCGCCAGCTCAGGGCCGACGA...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGCCAGGGTCTCCACGGTaGACTTGGGCGCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQPGSPR*TWAPRG
Trigger: TCCACGAGGCGCCCAAGTTCACCGTGGAGACCCTGG...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGGTGGGAGGAGGAAGGTaGCAGCCGCAATGCACACGC +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVVGGGR*QPQCTR
Trigger: GCGTGTGCATTGCGGCTGTCACCTTCCTCCTCCCAC...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GGAAGCAGGCGTGGGCTTCATGACTGTGGGATGCTCAGTTTGAGGAAAGCCAGGCGCAGGCTCAGGCGCTaGGCCTCTTTGGCTATGCGC +
Preference number: 4 (lower is better)
Translates to: GSRRGLHDCGMLSLRKARRRLRR*ASLAMR
Trigger: GCGCATAGCCAAAGAGGCGCAGCGCCTGAGCCTGCG...CCTGGCTTTCCTCAAACTGAGCATCCCACAGTCATGAAGCCCACGCCTGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCCGGCGTGCTCGTGGATaGGCAGCGCCACGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: GWGRFANDHVEERPCVSARRARG*AAPRGC
Trigger: ACAGCCGCGTGGCGCTGCGCATCCACGAGCACGCCG...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACTGTCCATGGAGAAGCTaGGGCGGTGGCCGGCGTGCG +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHCPWRS*GGGRRA
Trigger: CGCACGCCGGCCACCGCCGCAGCTTCTCCATGGACA...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCAGCCGCGAGCAGTGCTaGCCGGCGCAGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGSREQC*PAQSSP
Trigger: GGGGCTGGACTGCGCCGGCCAGCACTGCTCGCGGCT...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGAGCGCCTCCAGCTCCTaGAGAGTCCAGGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQSASSS*RVQGTS
Trigger: CGAGGTCCCCTGGACTCTCCAGGAGCTGGAGGCGCT...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTTCGTCGGCCCTGAGCTaGCGCGGCTCGCAGTCCACG +
Preference number: 4 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPSSALS*RGSQST
Trigger: CGTGGACTGCGAGCCGCGCCAGCTCAGGGCCGACGA...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCAGCCGGAGCCCGAGCCTaGCCCAGGGCCACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPAGARA*PRATAA
Trigger: AGCTGCAGTGGCCCTGGGTCAGGCTCGGGCTCCGGC...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp GGAAGCAGGCGTGGGCTTCATGACTGTGGGATGCTCAGTTTGAGGAAAGCCAGGGGTCGCCGCCGGCGCTaGTCATGTTGTAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: GSRRGLHDCGMLSLRKARGRRRR*SCCRGT
Trigger: TGTCCCTCTACAACATGAGCAGCGCCGGCGGCGACC...CCTGGCTTTCCTCAAACTGAGCATCCCACAGTCATGAAGCCCACGCCTGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGGACTCCAGCCACGTGTaGAGAGTCCACGGGACGCCT +
Preference number: 4 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGDSSHV*RVHGTP
Trigger: AGGCGTCCCGTGGACTCTGCACACGTGGCTGGAGTC...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGATGAGAGGCCTGCGGTaGTGCTGGAAGGCGATCCGC +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQMRGLR*CWKAIR
Trigger: GCGGATCGCCTTCCAGCAGCACCGCAGGCCTCTCAT...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GGAAGCAGGCGTGGGCTTCATGACTGTGGGATGCTCAGTTTGAGGAAAGCCAGGTGTGCCGGCTGTGCATaGAGTCAGCTAGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GSRRGLHDCGMLSLRKARCAGCA*SQLEAA
Trigger: GGCCGCCTCTAGCTGACTCCATGCACAGCCGGCACA...CCTGGCTTTCCTCAAACTGAGCATCCCACAGTCATGAAGCCCACGCCTGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGGGTGATGGTGGTGGTTaGCGGCGGCTGCCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQGDGGG*RRLPAG
Trigger: TCCCGCCGGCAGCCGCCGCCAACCACCACCATCACC...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp GGAAGCAGGCGTGGGCTTCATGACTGTGGGATGCTCAGTTTGAGGAAAGCCAGGGGCACAGCACCCCGCTaGCGTTCTTCCCGCAGATCA +
Preference number: 4 (lower is better)
Translates to: GSRRGLHDCGMLSLRKARGTAPR*RSSRRS
Trigger: TGATCTGCGGGAAGAACGCCAGCGGGGTGCTGTGCC...CCTGGCTTTCCTCAAACTGAGCATCCCACAGTCATGAAGCCCACGCCTGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGGGGGTGCCATTGCCGTaGTGCTTGGCATTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQGVPLP*CLALRG
Trigger: GCCCCTCAATGCCAAGCACCACGGCAATGGCACCCC...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTGCCGGAGCCCGAGCCTaGCCCAGGGCCACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTAGARA*PRATAA
Trigger: AGCTGCAGTGGCCCTGGGTCAGGCTCGGGCTCCGGC...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGGTGCCATTGCCGTGGTaGTTGGCATTGAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQVPLPW*LALRGC
Trigger: GCAGCCCCTCAATGCCAAGCACCACGGCAATGGCAC...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAGGGCTCCCAGTACAGTaGCCCCTGCTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRGLPVQ*PLLVVQ
Trigger: CTGCACCACAAGCAGGGGGCACTGTACTGGGAGCCC...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGTGTCCATGGAGAAGCTaGGGCGGTGGCCGGCGTGCG +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKCPWRS*GGGRRA
Trigger: CGCACGCCGGCCACCGCCGCAGCTTCTCCATGGACA...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACGTTTGGCCTTGCTGTTaGGGCTGGCGCACAAGGGGG +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHVWPCC*GWRTRG
Trigger: CCCCCTTGTGCGCCAGCCGCAACAGCAAGGCCAAAC...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAGACTCCAGCCACGTGTaGAGAGTCCACGGGACGCCT +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRDSSHV*RVHGTP
Trigger: AGGCGTCCCGTGGACTCTGCACACGTGGCTGGAGTC...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAATGGCGGCGTGCTCGTaGATGCGCAGCGCCACGCGG +
Preference number: 4 (lower is better)
Translates to: CLCLCKANAAGELESSREMAACS*MRSATR
Trigger: CCGCGTGGCGCTGCGCATCCACGAGCACGCCGCCAT...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAATCGTCGGCCCTGAGCTaGCGCGGCTCGCAGTCCACG +
Preference number: 4 (lower is better)
Translates to: CLCLCKANAAGELESSRESSALS*RGSQST
Trigger: CGTGGACTGCGAGCCGCGCCAGCTCAGGGCCGACGA...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTGTCAGAGCCGTCCAATaGCGGGTCTCGGGGTGGACG +
Preference number: 4 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPVRAVQ*RVSGWT
Trigger: CGTCCACCCCGAGACCCGCCATTGGACGGCTCTGAC...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAGGCCTGCGGTGCTGCTaGAAGGCGATCCGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRGLRCC*KAIRKD
Trigger: GTCTTTGCGGATCGCCTTCCAGCAGCACCGCAGGCC...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGATCAGGGGCAGGCCTTaGGTAACGAGCTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQIRGRP*VTSSSV
Trigger: CACGGAGGAGCTCGTTACCCAAGGCCTGCCCCTGAT...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp GGGTGCTTTCAATTGGGGTTAACTTGGTTGTCCAGTTGCCCATTAAACTCTGGAGGCCCACGGAGAAGGTaGGGCCGCAGCGGGCCGACT +
Preference number: 4 (lower is better)
Translates to: GCFQLGLTWLSSCPLNSGGPRRR*GRSGPT
Trigger: AGTCGGCCCGCTGCGGCCTCACCTTCTCCGTGGGCC...TCCAGAGTTTAATGGGCAACTGGACAACCAAGTTAACCCCAATTGAAAGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR TCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGGGCAGGAGAATGGTGTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQGRRMV*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCACACCATTCTCCTGCC...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAACGCTGCGCCACTTCATaGTGCAGCCGCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: CLCLCKANAAGELESSRERCATS*CSRLGA
Trigger: GGCTCCCAGGCGGCTGCAGCATGAAGTGGCGCAGCG...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACTACGGGGACGCCGGGTaGGAGTCGGAACAGCACAAA +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHYGDAG*ESEQHK
Trigger: TTTGTGCTGTTCCGACTCGCACCCGGCGTCCCCGTA...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGGCGCCTCTTTGGCTATaGGCACCAGCGCCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKAPLWL*APAPGS
Trigger: TGAGCCGGGCGCTGGTGCGCATAGCCAAAGAGGCGC...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAACGCAGGCTCAGGCGCTaGGCCTCTTTGGCTATGCGC +
Preference number: 4 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQRRLRR*ASLAMR
Trigger: GCGCATAGCCAAAGAGGCGCAGCGCCTGAGCCTGCG...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGCGGCGTGCTCGTGGATaGGCAGCGCCACGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRRRARG*AAPRGC
Trigger: ACAGCCGCGTGGCGCTGCGCATCCACGAGCACGCCG...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGACACTCAATTCGGCGATaGTGCCTACGCGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRHSIRR*CLRAWP
Trigger: TGGCCACGCGCGTAGGCAGCATCGCCGAATTGAGTG...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGAATTCTCTGACGTGCTaGCCCCCTCCCCCATTCAGC +
Preference number: 4 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGNSLTC*PPPPFS
Trigger: GCTGAATGGGGGAGGGGGGCAGCACGTCAGAGAATT...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGCCAGCGTCGACAGCTTaGCCAGCGCGTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQPASTA*PARPWA
Trigger: TGCCCAAGGACGCGCTGGCCAAGCTGTCGACGCTGG...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTGGTGATGGTGGTGGTTaGCGGCGGCTGCCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTGDGGG*RRLPAG
Trigger: TCCCGCCGGCAGCCGCCGCCAACCACCACCATCACC...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGGTCCTCAGCTCCGACTaGCTGAACATGGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGVLSSD*LNMGSS
Trigger: GGAACTGCCCATGTTCAGCCAGTCGGAGCTGAGGAC...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCGGGGTGCCATTGCCGTaGTGCTTGGCATTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GWGRFANDHVEERPCVSAGVPLP*CLALRG
Trigger: GCCCCTCAATGCCAAGCACCACGGCAATGGCACCCC...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATGTCAGAGCCGTCCAATaGCGGGTCTCGGGGTGGACG +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNVRAVQ*RVSGWT
Trigger: CGTCCACCCCGAGACCCGCCATTGGACGGCTCTGAC...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCGGCCTGCGGTGCTGCTaGAAGGCGATCCGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GWGRFANDHVEERPCVSAGLRCC*KAIRKD
Trigger: GTCTTTGCGGATCGCCTTCCAGCAGCACCGCAGGCC...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAACGGTGTTCGTGGGACTaGGACCACCCCAGATGCCGC +
Preference number: 4 (lower is better)
Translates to: CLCLCKANAAGELESSRERCSWD*DHPRCR
Trigger: GCGGCATCTGGGGTGGTCTCAGTCCCACGAACACCG...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR TCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGTTAACAAGCACTGGATaGGAGGCCTGCGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQLTSTG*EACGAA
Trigger: AGCAGCACCGCAGGCCTCTCATCCAGTGCTTGTTAA...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGGGGGAGGTTTGCAAATaGTCATGTGGAAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVGEVCK*SCGREA
Trigger: GGCCTCTCTTCCACATGATCATTTGCAAACCTCCCC...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GGAAGCAGGCGTGGGCTTCATGACTGTGGGATGCTCAGTTTGAGGAAAGCCAGGCAGGCGTGGGCTTCATaGCTGTGGGATGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: GSRRGLHDCGMLSLRKARQAWAS*LWDAQF
Trigger: AAACTGAGCATCCCACAGTCATGAAGCCCACGCCTG...CCTGGCTTTCCTCAAACTGAGCATCCCACAGTCATGAAGCCCACGCCTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGGGTCGCCGCCGGCGCTaGTCATGTTGTAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQGRRRR*SCCRGT
Trigger: TGTCCCTCTACAACATGAGCAGCGCCGGCGGCGACC...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACGTGGCCAGCAAAGACTaGTCGATGGTCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHVASKD*SMVLSS
Trigger: GGAGCTGAGGACCATCGAGCAGTCTTTGCTGGCCAC...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTTCAATTCGGCGATGCTaGCTACGCGCGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPSIRRC*LRAWPA
Trigger: TGCTGGCCACGCGCGTAGGCAGCATCGCCGAATTGA...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATGACTCCAGCCACGTGTaGAGAGTCCACGGGACGCCT +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNDSSHV*RVHGTP
Trigger: AGGCGTCCCGTGGACTCTGCACACGTGGCTGGAGTC...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGCTTGCTGGAGAGGAGTaGTTTGAACCTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVLAGEE*FEPWRG
Trigger: GCCTCTCCAAGGTTCAAAGCACTCCTCTCCAGCAAG...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGCCGGGAAGCATTCCCTaGACTAGGCGTTTCATACCA +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVPGSIP*TRRFIP
Trigger: TGGTATGAAACGCCTAGTGCAGGGAATGCTTCCCGG...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACACTAGCACCCCAGCCTaGCAGGGAAGGTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHTSTPA*QGRSLM
Trigger: CATCAGAGACCTTCCCTGGCAGGCTGGGGTGCTAGT...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACAGTCAGGCAAGCAAGTaGACTAGCACCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHSQASK*TSTPAC
Trigger: GCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACT...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGCATGCTGCAGCCGCCTaGGAGCCAAAGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQHAAAA*EPKGRS
Trigger: GCTCCTTCCCTTTGGCTCCCAGGCGGCTGCAGCATG...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCGCTGCGCCTCTTTaGCTATGCGCACCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRGAAPL*LCAPAP
Trigger: GGGCGCTGGTGCGCATAGCCAAAGAGGCGCAGCGCC...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAGTCCTCAGCTCCGACTaGCTGAACATGGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRVLSSD*LNMGSS
Trigger: GGAACTGCCCATGTTCAGCCAGTCGGAGCTGAGGAC...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAGCCTTCCACCTTaGCCCCAGCATCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPLSLPP*PQHPGG
Trigger: TCCTCCTGGATGCTGGGGCCAAGGTGGAAGGCTCAG...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCCTGAGCCTTCCACCTTaGCCCCAGCATCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GWGRFANDHVEERPCVSALSLPP*PQHPGG
Trigger: TCCTCCTGGATGCTGGGGCCAAGGTGGAAGGCTCAG...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGTTCTCCTTCTCTGGCTaGGCGAGCAGTTTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGFSFSG*ASSLRN
Trigger: GTTCCGCAAACTGCTCGCCCAGCCAGAGAAGGAGAA...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GGAAGCAGGCGTGGGCTTCATGACTGTGGGATGCTCAGTTTGAGGAAAGCCAGGTTCTCCTTCTCTGGCTaGGCGAGCAGTTTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: GSRRGLHDCGMLSLRKARFSFSG*ASSLRN
Trigger: GTTCCGCAAACTGCTCGCCCAGCCAGAGAAGGAGAA...CCTGGCTTTCCTCAAACTGAGCATCCCACAGTCATGAAGCCCACGCCTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGACTCTTCTCCTTCTCTaGCTGGGCGAGCAGTTTGCG +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQTLLLL*LGEQFA
Trigger: CGCAAACTGCTCGCCCAGCCAGAGAAGGAGAAGAGT...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCCAGCGCTGTGATACATaGCCTCCCTCAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GWGRFANDHVEERPCVSAQRCDT*PPSGPS
Trigger: TGAGGGCCCTGAGGGAGGCCATGTATCACAGCGCTG...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACCGCTGTGGGTCTCTGTaGAGATTCAGGCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHRCGSL*RFRLSG
Trigger: ACCAGACAGCCTGAATCTTCACAGAGACCCACAGCG...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATTCAGCTCCGACTGGCTaGACATGGGCAGTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNSAPTG*TWAVPL
Trigger: CAGGGGAACTGCCCATGTTCAGCCAGTCGGAGCTGA...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR TCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGGTTCGCTCATGGTGTTaGTCCCATCGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQVRSWC*SHRAPA
Trigger: TGCTGGGGCCCGATGGGATCAACACCATGAGCGAAC...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAAGCATCCAGCAGCATCTaGACCATCGCCTCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQASSSI*TIASSP
Trigger: TGGGGACGAGGCGATGGTTCAGATGCTGCTGGATGC...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGGACAAGTGGATGGACTaGATTCTGATGGCCAACGTC +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVDKWMD*ILMANV
Trigger: GACGTTGGCCATCAGAATTCAGTCCATCCACTTGTC...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGATGGTTGACGTTTGCTaGAGCACAGCTACCAAGGTC +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVMVDVC*STATKV
Trigger: GACCTTGGTAGCTGTGCTTCAGCAAACGTCAACCAT...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGCGCCTCTTTGGCTATaGGCACCAGCGCCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRAPLWL*APAPGS
Trigger: TGAGCCGGGCGCTGGTGCGCATAGCCAAAGAGGCGC...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCCTGACCCAGGGCCACTaGAGCTCCGGGGCACCCCGG +
Preference number: 4 (lower is better)
Translates to: TSSRIFPDDITINASAVALTQGH*SSGAPR
Trigger: CCGGGGTGCCCCGGAGCTGCAGTGGCCCTGGGTCAG...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTTCGTTGTTGACCGTGTaGTCCAGGGTCTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPSLLTV*SRVSTV
Trigger: CACCGTGGAGACCCTGGAGCACACGGTCAACAACGA...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGCACTCAATTCGGCGATaGTGCCTACGCGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQHSIRR*CLRAWP
Trigger: TGGCCACGCGCGTAGGCAGCATCGCCGAATTGAGTG...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATGTGCCATTGCCGTGGTaGTTGGCATTGAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNVPLPW*LALRGC
Trigger: GCAGCCCCTCAATGCCAAGCACCACGGCAATGGCAC...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGAGCAGAGACACTGCCTaGTTCACCAGGTCTGTTCGT +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQSRDTA*FTRSVR
Trigger: ACGAACAGACCTGGTGAAGCAGGCAGTGTCTCTGCT...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCCCCTCAGTTTGGCCTTaGTGTTGCGGCTGGCGCACA +
Preference number: 4 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGPSVWP*CCGWRT
Trigger: TGTGCGCCAGCCGCAACAGCAAGGCCAAACTGAGGG...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATAGAGGCCTGCGGTGCTaGTGGAAGGCGATCCGCAAA +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNRGLRC*WKAIRK
Trigger: TTTGCGGATCGCCTTCCAGCAGCACCGCAGGCCTCT...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGCTTGCTGGAGAGGAGTaGTTTGAACCTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQLAGEE*FEPWRG
Trigger: GCCTCTCCAAGGTTCAAAGCACTCCTCTCCAGCAAG...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGTCGGGCCCATGCAAATaGATGTTATGTGGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVSGPCK*MLCGGV
Trigger: AACACCCCCACATAACATGCATTTGCATGGGCCCGA...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATGAGTCCGCGCCGCCTTaGCTCACTTTTCCACTAGCC +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNESAPP*LTFPLA
Trigger: GGCTAGTGGAAAAGTGAGCCAAGGCGGCGCGGACTC...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGCACAAAGACAAGTTaGAGGAGCGCACCGAGTCCG +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRSTKTS*RSAPSP
Trigger: CGGACTCGGTGCGCTCCTCCAACTTGTCTTTGTGCT...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGCGTACTTGGTGCACTTaGCGAAGCGCAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQRTWCT*RSAGSG
Trigger: GCCTGAGCCTGCGCTTCGCCAAGTGCACCAAGTACG...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCTGCTGCCTACGCGCGTaGCCAGCAAAGACTGCTCGA +
Preference number: 4 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGCCLRA*PAKTAR
Trigger: TCGAGCAGTCTTTGCTGGCCACGCGCGTAGGCAGCA...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTGTCAGAGCCGTCCAATaGCGGGTCTCGGGGTGGACG +
Preference number: 4 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTVRAVQ*RVSGWT
Trigger: CGTCCACCCCGAGACCCGCCATTGGACGGCTCTGAC...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCCTGAGCCTTCCACCTTaGCCCCAGCATCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGLSLPP*PQHPGG
Trigger: TCCTCCTGGATGCTGGGGCCAAGGTGGAAGGCTCAG...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGCCGTGGGCTGCAGCCTaGCTGAAAGAGTTCATATCA +
Preference number: 4 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGPWAAA*LKEFIS
Trigger: TGATATGAACTCTTTCAGCCAGGCTGCAGCCCACGG...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACACATTCCTGTGTCCGTaGGCTGCAGCCTGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHTFLCP*AAAWLK
Trigger: TTTCAGCCAGGCTGCAGCCCACGGACACAGGAATGT...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGACCACCAGGGCAGTGTTaGCAGTGTCAAAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRPPGQC*QCQSCC
Trigger: ACAACAGCTTTGACACTGTCAACACTGCCCTGGTGG...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGTCTCCGAGTCGTTGTTaGCCGTGTGCTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKSPSRC*PCAPGS
Trigger: AGACCCTGGAGCACACGGTCAACAACGACTCGGAGA...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR TCA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGTTCGCTCATGGTGTTaGTCCCATCGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CLCLCKANAAGELESSREVRSWC*SHRAPA
Trigger: TGCTGGGGCCCGATGGGATCAACACCATGAGCGAAC...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGAATGCCTGGAGGCCCTaGACTAGCATTAGACATTCA +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVNAWRP*TSIRHS
Trigger: TGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATT...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGGGGGCTAGAACCAGTTaGATTACAAGAGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQGARTS*ITRGRQ
Trigger: CTGTCTGCCTCTTGTAATTCAACTGGTTCTAGCCCC...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCATGCGCCACTTCATGCTaGAGCCGCCTGGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPCATSC*SRLGAK
Trigger: TTTGGCTCCCAGGCGGCTGCAGCATGAAGTGGCGCA...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAGTGTCAAAGCTGTTGTaGCGGCTGTGCATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRVSKLL*RLCMES
Trigger: TGACTCCATGCACAGCCGGCACAACAGCTTTGACAC...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCGGATCTCGTACTTGGTaGACTTGGCGAAGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGGSRTW*TWRSAG
Trigger: GCCTGCGCTTCGCCAAGTGCACCAAGTACGAGATCC...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAAGTGGCCAGCAAAGACTaGTCGATGGTCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQVASKD*SMVLSS
Trigger: GGAGCTGAGGACCATCGAGCAGTCTTTGCTGGCCAC...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp ATGAAGCGATGTGACATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACGGGCTCCCAGTACAGTaGCCCCTGCTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: MKRCDIGPLNNGSGSSYNGLPVQ*PLLVVQ
Trigger: CTGCACCACAAGCAGGGGGCACTGTACTGGGAGCCC...GTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGCGGAAACCCAGGTCCTaGTTAAACTTGGCTTCGATG +
Preference number: 4 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGRKPRS*LNLASM
Trigger: CATCGAAGCCAAGTTTAAGCAGGACCTGGGTTTCCG...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATCCCCAGCAGAGACACTaGCTGCTTCACCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNPQQRH*LLHQVC
Trigger: ACAGACCTGGTGAAGCAGGCAGTGTCTCTGCTGGGG...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGCCAGCCAAAAACAGGTaGCAGGTGGAATTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVPAKNR*QVEFVC
Trigger: ACAGACAAATTCCACCTGGCACCTGTTTTTGGCTGG...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGAATTCTCTGACGTGCTaGCCCCCTCCCCCATTCAGC +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKNSLTC*PPPPFS
Trigger: GCTGAATGGGGGAGGGGGGCAGCACGTCAGAGAATT...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACCCGAGTTTACAGAAGTaGCACTCACCCAAGGGACCT +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHPSLQK*HSPKGP
Trigger: AGGTCCCTTGGGTGAGTGGCACTTCTGTAAACTCGG...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATCGGAACTGCCGCCGCTaGAATATACAGAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNRNCRR*NIQSRP
Trigger: GGGTCTGCTCTGTATATTCCAGCGGCGGCAGTTCCG...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACATCTCCATGGCGCTCTaGATCTCGTACTTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHISMAL*ISYLVH
Trigger: GTGCACCAAGTACGAGATCCAGAGCGCCATGGAGAT...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCATGGCGGCGTGCTCGTaGATGCGCAGCGCCACGCGG +
Preference number: 4 (lower is better)
Translates to: TSSRIFPDDITINASAVAMAACS*MRSATR
Trigger: CCGCGTGGCGCTGCGCATCCACGAGCACGCCGCCAT...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAAGGGCCTTTCCACCTaGAGGTTGACTTTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRKGLST*RLTLEG
Trigger: GCCTTCCAAAGTCAACCTCCAGGTGGAAAGGCCCTT...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGACCGTGGGCTGCAGCCTaGCTGAAAGAGTTCATATCA +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRPWAAA*LKEFIS
Trigger: TGATATGAACTCTTTCAGCCAGGCTGCAGCCCACGG...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCACAGCGCTGTGATACATaGCCTCCCTCAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPQRCDT*PPSGPS
Trigger: TGAGGGCCCTGAGGGAGGCCATGTATCACAGCGCTG...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGATCCTTTAACAAGCACTaGATGAGAGGCCTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRSFNKH*MRGLRC
Trigger: GCACCGCAGGCCTCTCATCCAGTGCTTGTTAAAGGA...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGGTCCTCTGTAAGTCCTaGAGCACATCCTGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQVLCKS*STSWPV
Trigger: GACCGGCCAGGATGTGCTCCAGGACTTACAGAGGAC...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAAAGTGGTCCCCGGCAGTaGGTGTTCAATGGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQSGPRQ*VFNGPR
Trigger: CCTAGGACCATTGAACACCCACTGCCGGGGACCACT...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGTTGAGGGGCTGCAGGTaGTGCATTGCACGGGACACC +
Preference number: 4 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRLRGCR*CIARDT
Trigger: GGTGTCCCGTGCAATGCATCACCTGCAGCCCCTCAA...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp ATGAAGCGATGTGACATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACCGTGGTGCTTGGCATTaGGGGGCTGCAGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: MKRCDIGPLNNGSGSSYNRGAWH*GAAGDA
Trigger: TGCATCACCTGCAGCCCCTCAATGCCAAGCACCACG...GTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR TCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGCGTGGTGCTTGGCATTaGGGGGCTGCAGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRRGAWH*GAAGDA
Trigger: TGCATCACCTGCAGCCCCTCAATGCCAAGCACCACG...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGTTTGTGGGCAGTGCATaGAATAGCAAAGGGTGTACA +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVFVGSA*NSKGCT
Trigger: TGTACACCCTTTGCTATTTCATGCACTGCCCACAAA...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR TCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGGGGCTGCAGCCTGGCTaGAAGAGTTCATATCACCCT +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQGLQPG*KSSYHP
Trigger: AGGGTGATATGAACTCTTTCAGCCAGGCTGCAGCCC...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATTTAACAAGCACTGGATaGGAGGCCTGCGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNLTSTG*EACGAA
Trigger: AGCAGCACCGCAGGCCTCTCATCCAGTGCTTGTTAA...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCAGGGTTGGTACGGTaGAGTCCTCCAACTGTCAAC +
Preference number: 4 (lower is better)
Translates to: GWGRFANDHVEERPCVSASGLVR*SPPTVN
Trigger: GTTGACAGTTGGAGGACTTCACCGTACCAACCCTGA...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAACATGGGCCATGCCCATaGAGCGATGTGACATTGGTC +
Preference number: 4 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQHGPCP*SDVTLV
Trigger: GACCAATGTCACATCGCTTCATGGGCATGGCCCATG...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTGTGGGAGGAGGAAGGTaGCAGCCGCAATGCACACGC +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSVGGGR*QPQCTR
Trigger: GCGTGTGCATTGCGGCTGTCACCTTCCTCCTCCCAC...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATCTGCAGGTGATGCATTaGACGGGACACCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNLQVMH*TGHQVT
Trigger: AGTGACCTGGTGTCCCGTGCAATGCATCACCTGCAG...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACATCCAGCTTTCGAGATaGACAAAAGCAGTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHIQLSR*TKAVVG
Trigger: GCCGACGACTGCTTTTGTGCATCTCGAAAGCTGGAT...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GGGTGCTTTCAATTGGGGTTAACTTGGTTGTCCAGTTGCCCATTAAACTCTGGAGTTTGGCCTTGCTGTTaGGGCTGGCGCACAAGGGGG +
Preference number: 4 (lower is better)
Translates to: GCFQLGLTWLSSCPLNSGVWPCC*GWRTRG
Trigger: CCCCCTTGTGCGCCAGCCGCAACAGCAAGGCCAAAC...TCCAGAGTTTAATGGGCAACTGGACAACCAAGTTAACCCCAATTGAAAGCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGCTTCTTACCTCTCCTaGCCATCGCTGCGCCACTTC +
Preference number: 4 (lower is better)
Translates to: CLCLCKANAAGELESSREASYLS*PSLRHF
Trigger: GAAGTGGCGCAGCGATGGCCAGGAGAGGTAAGAAGC...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp CTGTACAAATCAATGCCTGGAGGCCCTGAACTAGCATTAGACATTCACAGGGAATGTGCCGGCTGTGCATaGAGTCAGCTAGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LYKSMPGGPELALDIHRECAGCA*SQLEAA
Trigger: GGCCGCCTCTAGCTGACTCCATGCACAGCCGGCACA...TTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCAGCAAAGACTGCTCGATaGTCCTCAGCTCCGACTGGC +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPAKTAR*SSAPTG
Trigger: GCCAGTCGGAGCTGAGGACCATCGAGCAGTCTTTGC...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp ATGAAGCGATGTGACATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACTGCTGCCTACGCGCGTaGCCAGCAAAGACTGCTCGA +
Preference number: 4 (lower is better)
Translates to: MKRCDIGPLNNGSGSSYNCCLRA*PAKTAR
Trigger: TCGAGCAGTCTTTGCTGGCCACGCGCGTAGGCAGCA...GTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGCTCGGGGTGGACGGATaGATATTTATGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQLGVDG*IFMRST
Trigger: AGTACTCCTCATAAATATCCATCCGTCCACCCCGAG...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGTCAGGGCCCTCAGTTTaGCCTTGCTGTTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRSGPSV*PCCCGW
Trigger: CCAGCCGCAACAGCAAGGCCAAACTGAGGGCCCTGA...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTCAGCGCTGTGATACATaGCCTCCCTCAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTQRCDT*PPSGPS
Trigger: TGAGGGCCCTGAGGGAGGCCATGTATCACAGCGCTG...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCCTTTAACAAGCACTaGATGAGAGGCCTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GWGRFANDHVEERPCVSASFNKH*MRGLRC
Trigger: GCACCGCAGGCCTCTCATCCAGTGCTTGTTAAAGGA...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp ATGAAGCGATGTGACATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACATCAGGGGCAGGCCTTaGGTAACGAGCTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: MKRCDIGPLNNGSGSSYNIRGRP*VTSSSV
Trigger: CACGGAGGAGCTCGTTACCCAAGGCCTGCCCCTGAT...GTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGTCCTGGAGCACATCCTaGCCGGTCCCTTCACCATTT +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQSWSTS*PVPSPF
Trigger: AAATGGTGAAGGGACCGGCCAGGATGTGCTCCAGGA...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCAGTCCTCTGTAAGTCCTaGAGCACATCCTGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPVLCKS*STSWPV
Trigger: GACCGGCCAGGATGTGCTCCAGGACTTACAGAGGAC...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCACCATTCACTGGACAGTaGTCCCCGGCAGTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPPFTGQ*SPAVGV
Trigger: AACACCCACTGCCGGGGACCACTGTCCAGTGAATGG...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCACACCCAGATGCTCCATaGGCCATGCCCATGAAGCGA +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPHPDAP*AMPMKR
Trigger: TCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTG...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGTTCCCCTGGCTTGTTTaGCCGCTGTGGGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRFPWLV*PLWVSV
Trigger: CACAGAGACCCACAGCGGTCAAACAAGCCAGGGGAA...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCTTTCCACCTGGAGGTTaGCTTTGGAAGGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGFPPGG*LWKAPR
Trigger: ACGTGGAGCCTTCCAAAGTCAACCTCCAGGTGGAAA...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGATTTATGAGGAGTACTaGCAACCTCCACATTCAGGT +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVIYEEY*QPPHSG
Trigger: ACCTGAATGTGGAGGTTGTCAGTACTCCTCATAAAT...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTGTGACATTGGTCCTCTaGACAATGGTTCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPVTLVL*TMVQGA
Trigger: AGCTCCCTGAACCATTGTTCAGAGGACCAATGTCAC...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTGCCCATGAAGCGATGTaGCATTGGTCCTCTGAACAA +
Preference number: 4 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPAHEAM*HWSSEQ
Trigger: TTGTTCAGAGGACCAATGTCACATCGCTTCATGGGC...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAATCCGGACCGCACCGGTaGCCCCGGGGCAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQSGPHR*PRGRLS
Trigger: AGAGAGCCTGCCCCGGGGTCACCGGTGCGGTCCGGA...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS-3UTR TCA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCTTCCATGCAGGCTGGTaGCCCGAGTTTACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGFHAGW*PEFTEV
Trigger: CACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAA...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GGGTGTTTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTTACGGGGACGCCGGGTaGGAGTCGGAACAGCACAAA +
Preference number: 4 (lower is better)
Translates to: GCFILTPKPRLACRLLSTYGDAG*ESEQHK
Trigger: TTTGTGCTGTTCCGACTCGCACCCGGCGTCCCCGTA...AGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAAACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp ATGAAGCGATGTGACATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACGGATCTCGTACTTGGTaGACTTGGCGAAGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: MKRCDIGPLNNGSGSSYNGSRTW*TWRSAG
Trigger: GCCTGCGCTTCGCCAAGTGCACCAAGTACGAGATCC...GTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTGAATGTCCATGGAGAAGCTaGGGCGGTGGCCGGCGTGCG +
Preference number: 4 (lower is better)
Translates to: FILTPKPRLACRLLSTIECPWRS*GGGRRA
Trigger: CGCACGCCGGCCACCGCCGCAGCTTCTCCATGGACA...TTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATAGCAGAGACACTGCCTaGTTCACCAGGTCTGTTCGT +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNSRDTA*FTRSVR
Trigger: ACGAACAGACCTGGTGAAGCAGGCAGTGTCTCTGCT...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp ATGAAGCGATGTGACATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACCCCCAGCAGAGACACTaGCTGCTTCACCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: MKRCDIGPLNNGSGSSYNPQQRH*LLHQVC
Trigger: ACAGACCTGGTGAAGCAGGCAGTGTCTCTGCTGGGG...GTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTCCCCAGCAGAGACACTaGCTGCTTCACCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTPQQRH*LLHQVC
Trigger: ACAGACCTGGTGAAGCAGGCAGTGTCTCTGCTGGGG...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTCCTGTGTCCGTGGGCTaGAGCCTGGCTGAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTPVSVG*SLAERV
Trigger: AACTCTTTCAGCCAGGCTGCAGCCCACGGACACAGG...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGCCGGGAAGCATTCCCTaGACTAGGCGTTTCATACCA +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQPGSIP*TRRFIP
Trigger: TGGTATGAAACGCCTAGTGCAGGGAATGCTTCCCGG...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCTTCCAGACACTTCCATaGAGGCTGGTGACCCGAGTT +
Preference number: 4 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGFQTLP*RLVTRV
Trigger: AACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAA...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTCGGAGCTGGGCGCAATaGGGAGCGAGCCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPRSWAQ*GASQAG
Trigger: CCCGGCCTGGCTCGCTCCCCATTGCGCCCAGCTCCG...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTATACAGAGCAGACCCTaGAGTCATCTTCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPIQSRP*SHLPES
Trigger: GGACTCTGGAAGATGACTCCAGGGTCTGCTCTGTAT...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCAAGCACAAAGACAAGTTaGAGGAGCGCACCGAGTCCG +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPSTKTS*RSAPSP
Trigger: CGGACTCGGTGCGCTCCTCCAACTTGTCTTTGTGCT...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGTCTGGATCTCGTACTTaGTGCACTTGGCGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQSGSRT*CTWRSA
Trigger: TGCGCTTCGCCAAGTGCACCAAGTACGAGATCCAGA...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATATCTCCATGGCGCTCTaGATCTCGTACTTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNISMAL*ISYLVH
Trigger: GTGCACCAAGTACGAGATCCAGAGCGCCATGGAGAT...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTGCAAAGACTGCTCGATaGTCCTCAGCTCCGACTGGC +
Preference number: 4 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTAKTAR*SSAPTG
Trigger: GCCAGTCGGAGCTGAGGACCATCGAGCAGTCTTTGC...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATAAGGGCCTTTCCACCTaGAGGTTGACTTTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNKGLST*RLTLEG
Trigger: GCCTTCCAAAGTCAACCTCCAGGTGGAAAGGCCCTT...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGGAGTTCATATCACCCTaGGGGGTTGTAGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGEFISP*GVVEIP
Trigger: TGGAATTTCTACAACCCCCCAGGGTGATATGAACTC...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGCCGTGGGCTGCAGCCTaGCTGAAAGAGTTCATATCA +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKPWAAA*LKEFIS
Trigger: TGATATGAACTCTTTCAGCCAGGCTGCAGCCCACGG...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCATTCTCCTTCTCTGGCTaGGCGAGCAGTTTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPFSFSG*ASSLRN
Trigger: GTTCCGCAAACTGCTCGCCCAGCCAGAGAAGGAGAA...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGTCCTTTAACAAGCACTaGATGAGAGGCCTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKSFNKH*MRGLRC
Trigger: GCACCGCAGGCCTCTCATCCAGTGCTTGTTAAAGGA...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAATGACGCACAGCTGCTaGCTGATCACTTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRMTHSC*LITSFL
Trigger: CAAGAATGAAGTGATCAGCCAGCAGCTGTGCGTCAT...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCATCCTGGAGCACATCCTaGCCGGTCCCTTCACCATTT +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPSWSTS*PVPSPF
Trigger: AAATGGTGAAGGGACCGGCCAGGATGTGCTCCAGGA...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAACGGATGGATATTTATaGGGAGTACTGACAACCTCC +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRTDGYL*GVLTTS
Trigger: GGAGGTTGTCAGTACTCCTCATAAATATCCATCCGT...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACGTTTTTAATGAGCAGTaGCTCTGGGCCACCATAGTA +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHVFNEQ*LWATIV
Trigger: TACTATGGTGGCCCAGAGTCACTGCTCATTAAAAAC...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATGGATGGACTGAATTCTaGTGGCCAACGTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNGWTEF*WPTSSV
Trigger: TACAGAGGACGTTGGCCATCAGAATTCAGTCCATCC...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGGACAAGTGGATGGACTaGATTCTGATGGCCAACGTC +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQDKWMD*ILMANV
Trigger: GACGTTGGCCATCAGAATTCAGTCCATCCACTTGTC...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTTGTCAACCTGGAACCTaGGTGACCTTTAAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPCQPGT*VTFKRP
Trigger: AGGCCTTTTAAAGGTCACTCAGGTTCCAGGTTGACA...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCCAGTTGATTGTGTCCTaGCATCTCTCATCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGQLIVS*HLSSAR
Trigger: CCTGGCTGATGAGAGATGTCAGGACACAATCAACTG...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGAGCCTGGGGGCAGAGTaGGACTGTTTCACACACACA +
Preference number: 4 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRSLGAE*DCFTHT
Trigger: TGTGTGTGTGAAACAGTCTCACTCTGCCCCCAGGCT...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTCTGTTGTGCCGGCTGTaGATGGAGTCAGCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSLLCRL*MESARG
Trigger: GCCTCTAGCTGACTCCATGCACAGCCGGCACAACAG...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAAAGCAGCCGCGAGCAGTaGTGGCCGGCGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LAVHLFCVIMITKARLFQSSREQ*WPAQSS
Trigger: GCTGGACTGCGCCGGCCAGCACTGCTCGCGGCTGCT...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTCCTGTGTCCGTGGGCTaGAGCCTGGCTGAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSPVSVG*SLAERV
Trigger: AACTCTTTCAGCCAGGCTGCAGCCCACGGACACAGG...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GGGTGCTTTCAATTGGGGTTAACTTGGTTGTCCAGTTGCCCATTAAACTCTGGACCTGTGTCCGTGGGCTaGAGCCTGGCTGAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: GCFQLGLTWLSSCPLNSGPVSVG*SLAERV
Trigger: AACTCTTTCAGCCAGGCTGCAGCCCACGGACACAGG...TCCAGAGTTTAATGGGCAACTGGACAACCAAGTTAACCCCAATTGAAAGCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGTTGTCATACAGGAGCTaGTTGAATGCTTCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVLSYRS*LNASFS
Trigger: TGAAAACGAAGCATTCAAGCAGCTCCTGTATGACAA...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTACTTGGTTGTCCAGTTaGCCATTAAACTCTGGACCC +
Preference number: 4 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPTWLSS*PLNSGP
Trigger: GGGTCCAGAGTTTAATGGGCAACTGGACAACCAAGT...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGTCGGGCCCATGCAAATaGATGTTATGTGGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKSGPCK*MLCGGV
Trigger: AACACCCCCACATAACATGCATTTGCATGGGCCCGA...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGATTCCTTCCCTTCCCTaGCCCCTTACCACCAATGCC +
Preference number: 4 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRIPSLP*PLTTNA
Trigger: GGCATTGGTGGTAAGGGGGCAGGGAAGGGAAGGAAT...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTCCCAGTTCCCGGCCCTaGTTCGCTCGGCGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPPSSRP*FARRQP
Trigger: AGGCTGGCGCCGAGCGAACCAGGGCCGGGAACTGGG...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGTTCCCATTCCATTTGTaGGCAGTGCATGAAATAGCA +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQFPFHL*AVHEIA
Trigger: TGCTATTTCATGCACTGCCCACAAATGGAATGGGAA...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAGAGTTCATATCACCCTaGGGGGTTGTAGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYREFISP*GVVEIP
Trigger: TGGAATTTCTACAACCCCCCAGGGTGATATGAACTC...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp ATGAAGCGATGTGACATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACACATTCCTGTGTCCGTaGGCTGCAGCCTGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: MKRCDIGPLNNGSGSSYNTFLCP*AAAWLK
Trigger: TTTCAGCCAGGCTGCAGCCCACGGACACAGGAATGT...GTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCATACCACGGAACCTTTaGAAGACGACAAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: GWGRFANDHVEERPCVSAIPRNL*KTTSGW
Trigger: CCATCCACTTGTCGTCTTCCAAAGGTTCCGTGGTAT...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTATACCACGGAACCTTTaGAAGACGACAAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPIPRNL*KTTSGW
Trigger: CCATCCACTTGTCGTCTTCCAAAGGTTCCGTGGTAT...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAATGCGGCAGGAGAACTaGAAAGTTCCCGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: CLCLCKANAAGELESSREMRQEN*KVPGKH
Trigger: ATGCTTCCCGGGAACTTTCCAGTTCTCCTGCCGCAT...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGAAAACAGGTGCCAGGTaGAATTTGTCTGTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGKTGAR*NLSVFV
Trigger: CACAAACACAGACAAATTCCACCTGGCACCTGTTTT...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTAGTGGTCCCCGGCAGTaGGTGTTCAATGGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSSGPRQ*VFNGPR
Trigger: CCTAGGACCATTGAACACCCACTGCCGGGGACCACT...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCTCAGCTCCGACTGGCTaGACATGGGCAGTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TSSRIFPDDITINASAVASAPTG*TWAVPL
Trigger: CAGGGGAACTGCCCATGTTCAGCCAGTCGGAGCTGA...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCGCATCCAGCAGCATCTaGACCATCGCCTCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: TSSRIFPDDITINASAVAASSSI*TIASSP
Trigger: TGGGGACGAGGCGATGGTTCAGATGCTGCTGGATGC...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAATTTATGAGGAGTACTaGCAACCTCCACATTCAGGT +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRIYEEY*QPPHSG
Trigger: ACCTGAATGTGGAGGTTGTCAGTACTCCTCATAAAT...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTGGGCTGCAGCCTGGCTaGAAGAGTTCATATCACCCT +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSGLQPG*KSSYHP
Trigger: AGGGTGATATGAACTCTTTCAGCCAGGCTGCAGCCC...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACGTGTATTCCTCCTCCTaGATGGTCTTAAACTCCTTT +
Preference number: 4 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHVYSSS*MVLNSF
Trigger: AAAGGAGTTTAAGACCATTCAGGAGGAGGAATACAC...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGTACTGCATAACCAGCTaGAAGATGGAGTATTTCACA +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQYCITS*KMEYFT
Trigger: TGTGAAATACTCCATCTTTCAGCTGGTTATGCAGTA...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCAATGGTTGACGTTTGCTaGAGCACAGCTACCAAGGTC +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPMVDVC*STATKV
Trigger: GACCTTGGTAGCTGTGCTTCAGCAAACGTCAACCAT...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGCCCATGAAGCGATGTaGCATTGGTCCTCTGAACAA +
Preference number: 4 (lower is better)
Translates to: CLCLCKANAAGELESSREAHEAM*HWSSEQ
Trigger: TTGTTCAGAGGACCAATGTCACATCGCTTCATGGGC...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp CTGTACAAATCAATGCCTGGAGGCCCTGAACTAGCATTAGACATTCACAGGGAAGGAAGAGGCTCTCCATaGAGGCTGTCAGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: LYKSMPGGPELALDIHREGRGSP*RLSGRW
Trigger: CCATCTACCTGACAGCCTGCATGGAGAGCCTCTTCC...TTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCACGGAAACCCAGGTCCTaGTTAAACTTGGCTTCGATG +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPRKPRS*LNLASM
Trigger: CATCGAAGCCAAGTTTAAGCAGGACCTGGGTTTCCG...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTGAAATGAGAGGCCTGCGGTaGTGCTGGAAGGCGATCCGC +
Preference number: 4 (lower is better)
Translates to: FILTPKPRLACRLLSTIEMRGLR*CWKAIR
Trigger: GCGGATCGCCTTCCAGCAGCACCGCAGGCCTCTCAT...TTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGAAGATGACGCACAGCTaGTGGCTGATCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKKMTHS*WLITSF
Trigger: GAATGAAGTGATCAGCCAGCAGCTGTGCGTCATCTT...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCAATCTCACAGTGTCGCTaGAAAGCCTCCAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPISQCR*KASSWK
Trigger: TTTCCAGCTGGAGGCTTTGCAGCGACACTGTGAGAT...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAACCAGCTGATCTGATCTaGAGACCAGTGGAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: CLCLCKANAAGELESSREPADLI*RPVESP
Trigger: AGGACTTTCCACTGGTCTGCAGATCAGATCAGCTGG...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGACTTGGTTGTCCAGTTaGCCATTAAACTCTGGACCC +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKTWLSS*PLNSGP
Trigger: GGGTCCAGAGTTTAATGGGCAACTGGACAACCAAGT...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAACAGGTTCGGGCCCATaGAAATGCATGTTATGTGGG +
Preference number: 4 (lower is better)
Translates to: CLCLCKANAAGELESSRETGSGP*KCMLCG
Trigger: CCCACATAACATGCATTTGCATGGGCCCGAACCTGT...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAGAGGAGACTGTAATCTaGCCTCAGCTTCTATATCTT +
Preference number: 4 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYREETVI*PQLLYL
Trigger: AAGATATAGAAGCTGAGGGCAGATTACAGTCTCCTC...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTGGCGCTGCGCCTCTTTaGCTATGCGCACCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPGAAPL*LCAPAP
Trigger: GGGCGCTGGTGCGCATAGCCAAAGAGGCGCAGCGCC...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCCGTACTTGGTGCACTTaGCGAAGCGCAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TSSRIFPDDITINASAVARTWCT*RSAGSG
Trigger: GCCTGAGCCTGCGCTTCGCCAAGTGCACCAAGTACG...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTTCTGGATCTCGTACTTaGTGCACTTGGCGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTSGSRT*CTWRSA
Trigger: TGCGCTTCGCCAAGTGCACCAAGTACGAGATCCAGA...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGTGGAAGGCTCCACGTTaGGGTTTTCCCATTCCATTT +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKWKAPR*GFPIPF
Trigger: AAATGGAATGGGAAAACCCCAACGTGGAGCCTTCCA...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp GGGTGCTTTCAATTGGGGTTAACTTGGTTGTCCAGTTGCCCATTAAACTCTGGAACTCTTCTCCTTCTCTaGCTGGGCGAGCAGTTTGCG +
Preference number: 4 (lower is better)
Translates to: GCFQLGLTWLSSCPLNSGTLLLL*LGEQFA
Trigger: CGCAAACTGCTCGCCCAGCCAGAGAAGGAGAAGAGT...TCCAGAGTTTAATGGGCAACTGGACAACCAAGTTAACCCCAATTGAAAGCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAAATGACGCACAGCTGCTaGCTGATCACTTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQMTHSC*LITSFL
Trigger: CAAGAATGAAGTGATCAGCCAGCAGCTGTGCGTCAT...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGTCACAATCTAGGGTCTaGCACAACTTCCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKSQSRV*HNFLKA
Trigger: TGCCTTCAGGAAGTTGTGCCAGACCCTAGATTGTGA...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GGGTGCTTTCAATTGGGGTTAACTTGGTTGTCCAGTTGCCCATTAAACTCTGGATTTCCACCTGGAGGTTaGCTTTGGAAGGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: GCFQLGLTWLSSCPLNSGFPPGG*LWKAPR
Trigger: ACGTGGAGCCTTCCAAAGTCAACCTCCAGGTGGAAA...TCCAGAGTTTAATGGGCAACTGGACAACCAAGTTAACCCCAATTGAAAGCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR TCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGACGGATGGATATTTATaGGGAGTACTGACAACCTCC +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKTDGYL*GVLTTS
Trigger: GGAGGTTGTCAGTACTCCTCATAAATATCCATCCGT...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAAACGGATGGATATTTATaGGGAGTACTGACAACCTCC +
Preference number: 4 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQTDGYL*GVLTTS
Trigger: GGAGGTTGTCAGTACTCCTCATAAATATCCATCCGT...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCGTGTATTCCTCCTCCTaGATGGTCTTAAACTCCTTT +
Preference number: 4 (lower is better)
Translates to: GWGRFANDHVEERPCVSAVYSSS*MVLNSF
Trigger: AAAGGAGTTTAAGACCATTCAGGAGGAGGAATACAC...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GGGTGTTTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTTGGACCCAGCTGATCTaGTCTGCAGACCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GCFILTPKPRLACRLLSTWTQLI*SADQWK
Trigger: TTTCCACTGGTCTGCAGATCAGATCAGCTGGGTCCA...AGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAAACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp ATGAAGCGATGTGACATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACGTGACATTGGTCCTCTaGACAATGGTTCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: MKRCDIGPLNNGSGSSYNVTLVL*TMVQGA
Trigger: AGCTCCCTGAACCATTGTTCAGAGGACCAATGTCAC...GTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAAATGCCTGGAGGCCCTaGACTAGCATTAGACATTCA +
Preference number: 4 (lower is better)
Translates to: CLCLCKANAAGELESSRENAWRP*TSIRHS
Trigger: TGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATT...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCCTGTTGTGCCGGCTGTaGATGGAGTCAGCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: TSSRIFPDDITINASAVALLCRL*MESARG
Trigger: GCCTCTAGCTGACTCCATGCACAGCCGGCACAACAG...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCTCGTTGTTGACCGTGTaGTCCAGGGTCTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: TSSRIFPDDITINASAVASLLTV*SRVSTV
Trigger: CACCGTGGAGACCCTGGAGCACACGGTCAACAACGA...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTCGGAAACCCAGGTCCTaGTTAAACTTGGCTTCGATG +
Preference number: 4 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTRKPRS*LNLASM
Trigger: CATCGAAGCCAAGTTTAAGCAGGACCTGGGTTTCCG...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTATTTCCTACAGCAGCTaGCAGCTGGAGGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSISYSS*QLEGCF
Trigger: GAAACACCCCTCCAGCTGGCAGCTGCTGTAGGAAAT...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GGGTGTTTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTCTTGCTGGAGAGGAGTaGTTTGAACCTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GCFILTPKPRLACRLLSTLAGEE*FEPWRG
Trigger: GCCTCTCCAAGGTTCAAAGCACTCCTCTCCAGCAAG...AGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAAACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCCCCCCTTACCACCAATaGCAGTTAAAATTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGPPYHQ*QLKLGF
Trigger: GAAACCCAATTTTAACTGGCATTGGTGGTAAGGGGG...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACCCAGCGTCGACAGCTTaGCCAGCGCGTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNPASTA*PARPWA
Trigger: TGCCCAAGGACGCGCTGGCCAAGCTGTCGACGCTGG...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTTTCCCATTCCATTTGTaGGCAGTGCATGAAATAGCA +
Preference number: 4 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPFPFHL*AVHEIA
Trigger: TGCTATTTCATGCACTGCCCACAAATGGAATGGGAA...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCACAATCTCTTCAGGGTTaGTACGGTGAAGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPQSLQG*YGEVLQ
Trigger: TTGGAGGACTTCACCGTACCAACCCTGAAGAGATTG...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGTTATTTCCTCATTATTaGTCACAGCCTCACCAATTT +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVLFPHY*SQPHQF
Trigger: AAATTGGTGAGGCTGTGACCAATAATGAGGAAATAA...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGTTATCTGGAATACTGTaGCACTTTACCAATCTCTTT +
Preference number: 4 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVLSGIL*HFTNLF
Trigger: AAAGAGATTGGTAAAGTGCCACAGTATTCCAGATAA...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCATGGTCCTCTGAACAATaGTTCAGGGAGCTCGTACAA +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPWSSEQ*FRELVQ
Trigger: TTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCA...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGCGTGTTATTTCTATTTaGGGCTCCCTGATTGTGGAC +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQRVISI*GSLIVD
Trigger: GTCCACAATCAGGGAGCCCCAAATAGAAATAACACG...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS-3UTR CCA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCTTGGGTTTCACTCAGTaGCTACTAAAAGCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGLGFTQ*LLKAVR
Trigger: CCTGACTGCTTTTAGTAGCCACTGAGTGAAACCCAA...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGTCAGCTTCTATATCTTaGAAGAACAGACAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: VATKSSQASKCTSTPACQSASIS*KNRQCC
Trigger: ACAACACTGTCTGTTCTTCCAAGATATAGAAGCTGA...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR CAA 72 bp TCAATGGTCCTAGGGGTGCTTTCAATTGGGGTTAACTaGGTTGTCCAGTTGCCCATTAAACTCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: SMVLGVLSIGVN*VVQLPIKLWTQ
Trigger: CTGGGTCCAGAGTTTAATGGGCAACTGGACAACCAAGTTAACCCCAATTGAAAGCACCCCTAGGACCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCGGGCTGCAGCCTGGCTaGAAGAGTTCATATCACCCT +
Preference number: 4 (lower is better)
Translates to: TSSRIFPDDITINASAVAGLQPG*KSSYHP
Trigger: AGGGTGATATGAACTCTTTCAGCCAGGCTGCAGCCC...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGGGACCATCATGTTTTTaGGAAAGTAGCCTTCGCAAT +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKGPSCF*ESSLRN
Trigger: ATTGCGAAGGCTACTTTCTCAAAAACATGATGGTCC...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTTGTGAGGTCTGCTCTTaGACAGTTGATTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTCEVCS*TVDCVL
Trigger: CAGGACACAATCAACTGTTCAAGAGCAGACCTCACA...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCCTGCAGGTGATGCATTaGACGGGACACCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: TSSRIFPDDITINASAVALQVMH*TGHQVT
Trigger: AGTGACCTGGTGTCCCGTGCAATGCATCACCTGCAG...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp CTGTACAAATCAATGCCTGGAGGCCCTGAACTAGCATTAGACATTCACAGGGAAATCCAGCTTTCGAGATaGACAAAAGCAGTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: LYKSMPGGPELALDIHREIQLSR*TKAVVG
Trigger: GCCGACGACTGCTTTTGTGCATCTCGAAAGCTGGAT...TTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCGCTGGGCGAGCAGTTTaGGGAACACATTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: TSSRIFPDDITINASAVAAGRAV*GTHSCV
Trigger: GACACAGGAATGTGTTCCGCAAACTGCTCGCCCAGC...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAAATGAGAGGCCTGCGGTaGTGCTGGAAGGCGATCCGC +
Preference number: 4 (lower is better)
Translates to: LAVHLFCVIMITKARLFQMRGLR*CWKAIR
Trigger: GCGGATCGCCTTCCAGCAGCACCGCAGGCCTCTCAT...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGCAATCTCTATGCAGGTaGCATCATTTGTCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRQSLCR*HHLSAC
Trigger: GCAAGCCGACAAATGATGGCACCTGCATAGAGATTG...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATCATAACCAATCTCTATaGAGGTGCCATCATTTGTCG +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNHNQSL*RCHHLS
Trigger: CGACAAATGATGGCACCTGCATAGAGATTGGTTATG...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAACATAACCAATCTCTATaGAGGTGCCATCATTTGTCG +
Preference number: 4 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQHNQSL*RCHHLS
Trigger: CGACAAATGATGGCACCTGCATAGAGATTGGTTATG...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTTGTCATACAGGAGCTaGTTGAATGCTTCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GWGRFANDHVEERPCVSALSYRS*LNASFS
Trigger: TGAAAACGAAGCATTCAAGCAGCTCCTGTATGACAA...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCAAGGATAAGTGGGCCTaGAGTGAATACATAGTCCTA +
Preference number: 4 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGKDKWA*SEYIVL
Trigger: TAGGACTATGTATTCACTGCAGGCCCACTTATCCTT...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAAGGCACAGCACCCCGCTaGCGTTCTTCCCGCAGATCA +
Preference number: 4 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQGTAPR*RSSRRS
Trigger: TGATCTGCGGGAAGAACGCCAGCGGGGTGCTGTGCC...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGTGGAAGGCTCCACGTTaGGGTTTTCCCATTCCATTT +
Preference number: 4 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRWKAPR*GFPIPF
Trigger: AAATGGAATGGGAAAACCCCAACGTGGAGCCTTCCA...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTGGCCTGCGGTGCTGCTaGAAGGCGATCCGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPGLRCC*KAIRKD
Trigger: GTCTTTGCGGATCGCCTTCCAGCAGCACCGCAGGCC...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGTTTGTGAGCATAAAATaGTCTTCCTTCTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGFVSIK*SSFYQK
Trigger: TTTCTGGTAGAAGGAAGACCATTTTATGCTCACAAA...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GGAAGCAGGCGTGGGCTTCATGACTGTGGGATGCTCAGTTTGAGGAAAGCCAGGTTTGTGAGCATAAAATaGTCTTCCTTCTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: GSRRGLHDCGMLSLRKARFVSIK*SSFYQK
Trigger: TTTCTGGTAGAAGGAAGACCATTTTATGCTCACAAA...CCTGGCTTTCCTCAAACTGAGCATCCCACAGTCATGAAGCCCACGCCTGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGCAATTGGGGTTAACTTaGTTGTCCAGTTGCCCATTA +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKQLGLT*LSSCPL
Trigger: TAATGGGCAACTGGACAACCAAGTTAACCCCAATTG...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCGTGATTTTTGGCTTCTaGTTCAAAGCTCCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGVIFGF*FKAPSF
Trigger: GAAACTGGGAGCTTTGAACCAGAAGCCAAAAATCAC...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTTTGAGGGGCTGCAGGTaGTGCATTGCACGGGACACC +
Preference number: 4 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPLRGCR*CIARDT
Trigger: GGTGTCCCGTGCAATGCATCACCTGCAGCCCCTCAA...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR TCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGTTTGTGGGCAGTGCATaGAATAGCAAAGGGTGTACA +
Preference number: 4 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRFVGSA*NSKGCT
Trigger: TGTACACCCTTTGCTATTTCATGCACTGCCCACAAA...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACGTTCGCTCATGGTGTTaGTCCCATCGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNVRSWC*SHRAPA
Trigger: TGCTGGGGCCCGATGGGATCAACACCATGAGCGAAC...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGTGTATTCCTCCTCCTaGATGGTCTTAAACTCCTTT +
Preference number: 4 (lower is better)
Translates to: CLCLCKANAAGELESSREVYSSS*MVLNSF
Trigger: AAAGGAGTTTAAGACCATTCAGGAGGAGGAATACAC...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTTGTCAACCTGGAACCTaGGTGACCTTTAAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSCQPGT*VTFKRP
Trigger: AGGCCTTTTAAAGGTCACTCAGGTTCCAGGTTGACA...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAAAAGAAAGGCCGCAACTaGAAAGTTATCTGGAATACT +
Preference number: 4 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQKKGRN*KVIWNT
Trigger: AGTATTCCAGATAACTTTTCAGTTGCGGCCTTTCTT...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGAAGTCTTCATCCAAATaGAAACCCAACACGGGTCCT +
Preference number: 4 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRKSSSK*KPNTGP
Trigger: AGGACCCGTGTTGGGTTTTCATTTGGATGAAGACTT...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTGTTAGTACTTTCGGCTaGCTCCCGGAACTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLVSTFG*LPELPP
Trigger: CGGCGGCAGTTCCGGGAGGCAGCCGAAAGTACTAAC...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTTCTCCTGGCCATCGCTaGGCCACTTCATGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPSPGHR*ATSCCS
Trigger: GCTGCAGCATGAAGTGGCGCAGCGATGGCCAGGAGA...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACTCAATTCGGCGATGCTaGCTACGCGCGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNSIRRC*LRAWPA
Trigger: TGCTGGCCACGCGCGTAGGCAGCATCGCCGAATTGA...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATACAGGAATATGTCCATaGAACACAGCAAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNTGICP*NTAKVR
Trigger: TCTGACTTTTGCTGTGTTGCATGGACATATTCCTGT...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCATTTCCTACAGCAGCTaGCAGCTGGAGGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: TSSRIFPDDITINASAVAISYSS*QLEGCF
Trigger: GAAACACCCCTCCAGCTGGCAGCTGCTGTAGGAAAT...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTCCCTCAGTTTGGCCTTaGTGTTGCGGCTGGCGCACA +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLPSVWP*CCGWRT
Trigger: TGTGCGCCAGCCGCAACAGCAAGGCCAAACTGAGGG...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAACCCTCAGTTTGGCCTTaGTGTTGCGGCTGGCGCACA +
Preference number: 4 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQPSVWP*CCGWRT
Trigger: TGTGCGCCAGCCGCAACAGCAAGGCCAAACTGAGGG...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAAAGAGGCCTGCGGTGCTaGTGGAAGGCGATCCGCAAA +
Preference number: 4 (lower is better)
Translates to: LAVHLFCVIMITKARLFQRGLRC*WKAIRK
Trigger: TTTGCGGATCGCCTTCCAGCAGCACCGCAGGCCTCT...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACAGAGGCCTGCGGTGCTaGTGGAAGGCGATCCGCAAA +
Preference number: 4 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNRGLRC*WKAIRK
Trigger: TTTGCGGATCGCCTTCCAGCAGCACCGCAGGCCTCT...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTCACTCCCTTCCCATCTaGAGCCTCGTCCCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLHSLPI*SLVPVV
Trigger: GACGACAGGGACGAGGCTGCAGATGGGAAGGGAGTG...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS-3UTR GCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACCCGAAATTGCACCACTaGACTCCAGCCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNPKLHH*TPAWGQ
Trigger: CTGCCCCCAGGCTGGAGTGCAGTGGTGCAATTTCGG...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp GGGTGCTTTCAATTGGGGTTAACTTGGTTGTCCAGTTGCCCATTAAACTCTGGACTCGGGGTGGACGGATaGATATTTATGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: GCFQLGLTWLSSCPLNSGLGVDG*IFMRST
Trigger: AGTACTCCTCATAAATATCCATCCGTCCACCCCGAG...TCCAGAGTTTAATGGGCAACTGGACAACCAAGTTAACCCCAATTGAAAGCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CTGTACAAATCAATGCCTGGAGGCCCTGAACTAGCATTAGACATTCACAGGGAACTCGGGGTGGACGGATaGATATTTATGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: LYKSMPGGPELALDIHRELGVDG*IFMRST
Trigger: AGTACTCCTCATAAATATCCATCCGTCCACCCCGAG...TTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTATCAGGGGCAGGCCTTaGGTAACGAGCTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPIRGRP*VTSSSV
Trigger: CACGGAGGAGCTCGTTACCCAAGGCCTGCCCCTGAT...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAACAAATGCATGTTATGTaGGGGTGTTTTATTCTCACC +
Preference number: 4 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQQMHVM*GCFILT
Trigger: GGTGAGAATAAAACACCCCCACATAACATGCATTTG...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAACCGGGGCAGGCTCTCTaGAATCCTTGGGCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQPGQAL*NPWASV
Trigger: AACTGAGGCCCAAGGATTCCAGAGAGCCTGCCCCGG...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS-3UTR TCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACTCTCCGAGTCGTTGTTaGCCGTGTGCTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNSPSRC*PCAPGS
Trigger: AGACCCTGGAGCACACGGTCAACAACGACTCGGAGA...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR TCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAATTCCCCTGGCTTGTTTaGCCGCTGTGGGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQFPWLV*PLWVSV
Trigger: CACAGAGACCCACAGCGGTCAAACAAGCCAGGGGAA...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR TCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACGCATCCAGCAGCATCTaGACCATCGCCTCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: NNPVLYTLRIQKESILSYASSSI*TIASSP
Trigger: TGGGGACGAGGCGATGGTTCAGATGCTGCTGGATGC...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCATACTGCATAACCAGCTaGAAGATGGAGTATTTCACA +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPYCITS*KMEYFT
Trigger: TGTGAAATACTCCATCTTTCAGCTGGTTATGCAGTA...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTGTTTTTAATGAGCAGTaGCTCTGGGCCACCATAGTA +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSVFNEQ*LWATIV
Trigger: TACTATGGTGGCCCAGAGTCACTGCTCATTAAAAAC...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GGGTGTTTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTGTTTTTAATGAGCAGTaGCTCTGGGCCACCATAGTA +
Preference number: 4 (lower is better)
Translates to: GCFILTPKPRLACRLLSTVFNEQ*LWATIV
Trigger: TACTATGGTGGCCCAGAGTCACTGCTCATTAAAAAC...AGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAAACACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTAACCTGGAACCTGAGTaGCCTTTAAAAGGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSNLEPE*PLKGLN
Trigger: ATTGAGGCCTTTTAAAGGTCACTCAGGTTCCAGGTT...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGATTCAGCATCATCTATaGACACATTTCTGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQIQHHL*THFCKS
Trigger: GCTTTTGCAGAAATGTGTTCATAGATGATGCTGAAT...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTAGGCTAGGAGGTAACTaGTCTGGGAATATTATCCCT +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSRLGGN*SGNIIP
Trigger: AGGGATAATATTCCCAGATCAGTTACCTCCTAGCCT...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS-3UTR TCA 90 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTGAAAGCCTGGGGATAATGTaGCTAGGAAAGGCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: FILTPKPRLACRLLSTIESLGIM*LGKARR
Trigger: CCTCCTAGCCTTTCCTAGTCACATTATCCCCAGGCT...TTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS-3UTR TCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACTGGGTGGGGAGAGAGTaGCCACGGAAGGTTTCACAG +
Preference number: 4 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNWVGRE*PRKVSQ
Trigger: CTGTGAAACCTTCCGTGGTCACTCTCTCCCCACCCA...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACGCTGCCTCCCGGAACTaGCGCCGCTGGAATATACAG +
Preference number: 4 (lower is better)
Translates to: NNPVLYTLRIQKESILSYAASRN*RRWNIQ
Trigger: CTGTATATTCCAGCGGCGGCAGTTCCGGGAGGCAGC...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAACAGGAATATGTCCATaGAACACAGCAAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: CLCLCKANAAGELESSRETGICP*NTAKVR
Trigger: TCTGACTTTTGCTGTGTTGCATGGACATATTCCTGT...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTGAACAGATATCACCCAGATaGTCCATGGGCCATGCCCAT +
Preference number: 4 (lower is better)
Translates to: FILTPKPRLACRLLSTIEQISPR*SMGHAH
Trigger: ATGGGCATGGCCCATGGAGCATCTGGGTGATATCTG...TTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GGGTGCTTTCAATTGGGGTTAACTTGGTTGTCCAGTTGCCCATTAAACTCTGGAGAGTTCATATCACCCTaGGGGGTTGTAGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: GCFQLGLTWLSSCPLNSGEFISP*GVVEIP
Trigger: TGGAATTTCTACAACCCCCCAGGGTGATATGAACTC...TCCAGAGTTTAATGGGCAACTGGACAACCAAGTTAACCCCAATTGAAAGCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACTCAGGGCCCTCAGTTTaGCCTTGCTGTTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: NNPVLYTLRIQKESILSYSGPSV*PCCCGW
Trigger: CCAGCCGCAACAGCAAGGCCAAACTGAGGGCCCTGA...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTGAAATGCGGCAGGAGAACTaGAAAGTTCCCGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: FILTPKPRLACRLLSTIEMRQEN*KVPGKH
Trigger: ATGCTTCCCGGGAACTTTCCAGTTCTCCTGCCGCAT...TTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTCCATTCACTGGACAGTaGTCCCCGGCAGTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLPFTGQ*SPAVGV
Trigger: AACACCCACTGCCGGGGACCACTGTCCAGTGAATGG...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATCATGTTTACACAGTGTaGACCTGTGACTTACTATTT +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNHVYTV*TCDLLF
Trigger: AAATAGTAAGTCACAGGTCCACACTGTGTAAACATG...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATATTAGAGATACTTATTaGCAGTGCACCTCTTTTGTG +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNIRDTY*QCTSFV
Trigger: CACAAAAGAGGTGCACTGCCAATAAGTATCTCTAAT...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGATTAGAGATACTTATTaGCAGTGCACCTCTTTTGTG +
Preference number: 4 (lower is better)
Translates to: GRFANDHVEERPCVSASQIRDTY*QCTSFV
Trigger: CACAAAAGAGGTGCACTGCCAATAAGTATCTCTAAT...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCACAAATGCATGTTATGTaGGGGTGTTTTATTCTCACC +
Preference number: 4 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPQMHVM*GCFILT
Trigger: GGTGAGAATAAAACACCCCCACATAACATGCATTTG...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATTTTATCAACAAAACTTaGCTGTCCCCAAGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNFINKT*LSPRVK
Trigger: TTTTACCCTTGGGGACAGCCAAGTTTTGTTGATAAA...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTACAACAGAAGAACAGTaGGTCCTTCACAATCTAGGG +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSTTEEQ*VLHNLG
Trigger: CCCTAGATTGTGAAGGACCCACTGTTCTTCTGTTGT...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTACCAAGCGCAGGGTCTaGAGCGGCGGAAAACCAATC +
Preference number: 4 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPTKRRV*SGGKPI
Trigger: GATTGGTTTTCCGCCGCTCCAGACCCTGCGCTTGGT...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS-3UTR CCA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGAAGAAAGGATAAGTaGGCCTGCAGTGAATACATA +
Preference number: 4 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRGRKDK*ACSEYI
Trigger: TATGTATTCACTGCAGGCCCACTTATCCTTTCTTCC...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR CAA 72 bp ATTATTGGTCACAGCCTCACCAATTTGCTACCATGGTaGACGTTTGCTGAAGCACAGCTACCAAGGTCCTTA +
Preference number: 4 (lower is better)
Translates to: IIGHSLTNLLPW*TFAEAQLPRSL
Trigger: TAAGGACCTTGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTGACCAATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTCGCTGTGGGTCTCTGTaGAGATTCAGGCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLRCGSL*RFRLSG
Trigger: ACCAGACAGCCTGAATCTTCACAGAGACCCACAGCG...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR TCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTATTTATGAGGAGTACTaGCAACCTCCACATTCAGGT +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSIYEEY*QPPHSG
Trigger: ACCTGAATGTGGAGGTTGTCAGTACTCCTCATAAAT...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTTTAACAAGCACTGGATaGGAGGCCTGCGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLLTSTG*EACGAA
Trigger: AGCAGCACCGCAGGCCTCTCATCCAGTGCTTGTTAA...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACAGGCAGAGGTTGCAGTaGGCCGAAATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNRQRLQ*AEIAPL
Trigger: CAGTGGTGCAATTTCGGCTCACTGCAACCTCTGCCT...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACGGAAGAGGCTCTCCATaGAGGCTGTCAGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNGRGSP*RLSGRW
Trigger: CCATCTACCTGACAGCCTGCATGGAGAGCCTCTTCC...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAAGCTGGGCGAGCAGTTTaGGGAACACATTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LAVHLFCVIMITKARLFQAGRAV*GTHSCV
Trigger: GACACAGGAATGTGTTCCGCAAACTGCTCGCCCAGC...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTACATTCCTGTGTCCGTaGGCTGCAGCCTGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLTFLCP*AAAWLK
Trigger: TTTCAGCCAGGCTGCAGCCCACGGACACAGGAATGT...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAACCTCAATCCATTCACTaGACAGTGGTCCCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQPQSIH*TVVPGS
Trigger: ACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGG...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGTTATTTCCTCATTATTaGTCACAGCCTCACCAATTT +
Preference number: 4 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKLFPHY*SQPHQF
Trigger: AAATTGGTGAGGCTGTGACCAATAATGAGGAAATAA...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTTGTGTATCTGTAGCTTaGACTCTTCTTCAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSCVSVA*TLLQAV
Trigger: AACTGCCTGAAGAAGAGTCCAAGCTACAGATACACA...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTGTTATCCCCATTTTATaGGTAAGGAAGCTGAGGATA +
Preference number: 4 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTVIPIL*VRKLRI
Trigger: TATCCTCAGCTTCCTTACCCATAAAATGGGGATAAC...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
3UTR CAA 72 bp ACAGAGAAAGCACACCAAATGATAACAGAAGCCTCATaGGGAGTTACCACTGTACAAATCAATGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TEKAHQMITEAS*GVTTVQINAWR
Trigger: CCTCCAGGCATTGATTTGTACAGTGGTAACTCCCAATGAGGCTTCTGTTATCATTTGGTGTGCTTTCTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAACCACCAGGGCAGTGTTaGCAGTGTCAAAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQPPGQC*QCQSCC
Trigger: ACAACAGCTTTGACACTGTCAACACTGCCCTGGTGG...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR TCA 90 bp GGGTGTTTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTTACTGCATAACCAGCTaGAAGATGGAGTATTTCACA +
Preference number: 4 (lower is better)
Translates to: GCFILTPKPRLACRLLSTYCITS*KMEYFT
Trigger: TGTGAAATACTCCATCTTTCAGCTGGTTATGCAGTA...AGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAAACACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAAGCCTTCGCAATATGCTaGGAGCTCTGTGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: LAVHLFCVIMITKARLFQAFAIC*ELCDSK
Trigger: CTTGGAGTCACAGAGCTCTCAGCATATTGCGAAGGC...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTGCCTTCGCAATATGCTaGGAGCTCTGTGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLAFAIC*ELCDSK
Trigger: CTTGGAGTCACAGAGCTCTCAGCATATTGCGAAGGC...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTAACTCTGGACCCAGCTaGTCTGATCTGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLNSGPS*SDLQTS
Trigger: ACTGGTCTGCAGATCAGATCAGCTGGGTCCAGAGTT...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTAAGAAAGGCCGCAACTaGAAAGTTATCTGGAATACT +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSKKGRN*KVIWNT
Trigger: AGTATTCCAGATAACTTTTCAGTTGCGGCCTTTCTT...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAAGGGGAGGTTTGCAAATaGTCATGTGGAAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQGEVCK*SCGREA
Trigger: GGCCTCTCTTCCACATGATCATTTGCAAACCTCCCC...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTAGCAGAGACACTGCCTaGTTCACCAGGTCTGTTCGT +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLSRDTA*FTRSVR
Trigger: ACGAACAGACCTGGTGAAGCAGGCAGTGTCTCTGCT...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTATTTCCTACAGCAGCTaGCAGCTGGAGGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPISYSS*QLEGCF
Trigger: GAAACACCCCTCCAGCTGGCAGCTGCTGTAGGAAAT...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACGCTGGGCGAGCAGTTTaGGGAACACATTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: NNPVLYTLRIQKESILSYAGRAV*GTHSCV
Trigger: GACACAGGAATGTGTTCCGCAAACTGCTCGCCCAGC...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTCAGATATCACCCAGATaGTCCATGGGCCATGCCCAT +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLQISPR*SMGHAH
Trigger: ATGGGCATGGCCCATGGAGCATCTGGGTGATATCTG...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTACAGCACGATCTCCATaGCGCTCTGGATCTCGTACT +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLTARSP*RSGSRT
Trigger: AGTACGAGATCCAGAGCGCCATGGAGATCGTGCTGT...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACACAGCACGATCTCCATaGCGCTCTGGATCTCGTACT +
Preference number: 4 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNTARSP*RSGSRT
Trigger: AGTACGAGATCCAGAGCGCCATGGAGATCGTGCTGT...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACACTCTTCTCCTTCTCTaGCTGGGCGAGCAGTTTGCG +
Preference number: 4 (lower is better)
Translates to: NNPVLYTLRIQKESILSYTLLLL*LGEQFA
Trigger: CGCAAACTGCTCGCCCAGCCAGAGAAGGAGAAGAGT...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp CTGTACAAATCAATGCCTGGAGGCCCTGAACTAGCATTAGACATTCACAGGGAATTGCAAATGATCATGTaGAAGAGAGGCCTTGTGTAT +
Preference number: 4 (lower is better)
Translates to: LYKSMPGGPELALDIHRELQMIM*KRGLVY
Trigger: ATACACAAGGCCTCTCTTCCACATGATCATTTGCAA...TTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CAA 72 bp GATTATTTCCTCATTATTGGTCACAGCCTCACCAATTaGCTACCATGGTTGACGTTTGCTGAAGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: DYFLIIGHSLTN*LPWLTFAEAQL
Trigger: TAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTGACCAATAATGAGGAAATAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACTCAGGGTTGGTACGGTaGAGTCCTCCAACTGTCAAC +
Preference number: 4 (lower is better)
Translates to: NNPVLYTLRIQKESILSYSGLVR*SPPTVN
Trigger: GTTGACAGTTGGAGGACTTCACCGTACCAACCCTGA...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp CTGTACAAATCAATGCCTGGAGGCCCTGAACTAGCATTAGACATTCACAGGGAAATTCAGCATCATCTATaGACACATTTCTGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LYKSMPGGPELALDIHREIQHHL*THFCKS
Trigger: GCTTTTGCAGAAATGTGTTCATAGATGATGCTGAAT...TTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCAGGATTAATTGGGGGTaGTTTTTGGCTTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: TSSRIFPDDITINASAVARINWG*FLASGS
Trigger: TGAACCAGAAGCCAAAAATCACCCCCAATTAATCCT...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACGTGTCAAAGCTGTTGTaGCGGCTGTGCATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: NNPVLYTLRIQKESILSYVSKLL*RLCMES
Trigger: TGACTCCATGCACAGCCGGCACAACAGCTTTGACAC...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTATCCAGCTTTCGAGATaGACAAAAGCAGTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLIQLSR*TKAVVG
Trigger: GCCGACGACTGCTTTTGTGCATCTCGAAAGCTGGAT...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAAATCTCACAGTGTCGCTaGAAAGCCTCCAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LAVHLFCVIMITKARLFQISQCR*KASSWK
Trigger: TTTCCAGCTGGAGGCTTTGCAGCGACACTGTGAGAT...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAAACAGGTTCGGGCCCATaGAAATGCATGTTATGTGGG +
Preference number: 4 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQTGSGP*KCMLCG
Trigger: CCCACATAACATGCATTTGCATGGGCCCGAACCTGT...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTTTTGCTTATAATATATaGCAGAGCCAACGAAACCCT +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSFAYNI*QSQRNP
Trigger: AGGGTTTCGTTGGCTCTGCCATATATTATAAGCAAA...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTAAGATGACGCACAGCTaGTGGCTGATCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPKMTHS*WLITSF
Trigger: GAATGAAGTGATCAGCCAGCAGCTGTGCGTCATCTT...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACAAGATGACGCACAGCTaGTGGCTGATCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNKMTHS*WLITSF
Trigger: GAATGAAGTGATCAGCCAGCAGCTGTGCGTCATCTT...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACAATCTCTATGCAGGTaGCATCATTTGTCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LAVHLFCVIMITKARLFQQSLCR*HHLSAC
Trigger: GCAAGCCGACAAATGATGGCACCTGCATAGAGATTG...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAAATGACGCACAGCTGCTaGCTGATCACTTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQMTHSC*LITSFL
Trigger: CAAGAATGAAGTGATCAGCCAGCAGCTGTGCGTCAT...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTTTTGTGAGCATAAAATaGTCTTCCTTCTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSFVSIK*SSFYQK
Trigger: TTTCTGGTAGAAGGAAGACCATTTTATGCTCACAAA...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACAATCTCTTCAGGGTTaGTACGGTGAAGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LAVHLFCVIMITKARLFQQSLQG*YGEVLQ
Trigger: TTGGAGGACTTCACCGTACCAACCCTGAAGAGATTG...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTGAAACCAATTTGCTACCATaGTTGACGTTTGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: FILTPKPRLACRLLSTIETNLLP*LTFAEA
Trigger: TGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGT...TTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTTCACAATCTAGGGTCTaGCACAACTTCCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLSQSRV*HNFLKA
Trigger: TGCCTTCAGGAAGTTGTGCCAGACCCTAGATTGTGA...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAATGGTCCTCTGAACAATaGTTCAGGGAGCTCGTACAA +
Preference number: 4 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQWSSEQ*FRELVQ
Trigger: TTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCA...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACCTGCTCTTGAACAGTTaGTTGTGTCCTGACATCTCT +
Preference number: 4 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNLLLNS*LCPDIS
Trigger: AGAGATGTCAGGACACAATCAACTGTTCAAGAGCAG...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACCAATCTCTATGCAGGTaGCATCATTTGTCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: NNPVLYTLRIQKESILSYQSLCR*HHLSAC
Trigger: GCAAGCCGACAAATGATGGCACCTGCATAGAGATTG...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTCAGGAGCTGCTTGAATaGTTCGTTTTCAATGAGGAC +
Preference number: 4 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPQELLE*FVFNED
Trigger: GTCCTCATTGAAAACGAAGCATTCAAGCAGCTCCTG...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACCCAGCCAAAAACAGGTaGCAGGTGGAATTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: NNPVLYTLRIQKESILSYPAKNR*QVEFVC
Trigger: ACAGACAAATTCCACCTGGCACCTGTTTTTGGCTGG...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAAACAACAGAAGAACAGTaGGTCCTTCACAATCTAGGG +
Preference number: 4 (lower is better)
Translates to: LAVHLFCVIMITKARLFQTTEEQ*VLHNLG
Trigger: CCCTAGATTGTGAAGGACCCACTGTTCTTCTGTTGT...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CAA 72 bp GTTATCTGGAATACTGTGGCACTTTACCAATCTCTTTaGCTTATAATATATGGCAGAGCCAACGAAACCCTG +
Preference number: 4 (lower is better)
Translates to: VIWNTVALYQSL*LIIYGRANETL
Trigger: CAGGGTTTCGTTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTCCAGATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR TCA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAAGGACCATCATGTTTTTaGGAAAGTAGCCTTCGCAAT +
Preference number: 4 (lower is better)
Translates to: LAVHLFCVIMITKARLFQGPSCF*ESSLRN
Trigger: ATTGCGAAGGCTACTTTCTCAAAAACATGATGGTCC...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACCATAACCAATCTCTATaGAGGTGCCATCATTTGTCG +
Preference number: 4 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNHNQSL*RCHHLS
Trigger: CGACAAATGATGGCACCTGCATAGAGATTGGTTATG...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACCAGGAGCTGCTTGAATaGTTCGTTTTCAATGAGGAC +
Preference number: 4 (lower is better)
Translates to: NNPVLYTLRIQKESILSYQELLE*FVFNED
Trigger: GTCCTCATTGAAAACGAAGCATTCAAGCAGCTCCTG...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTAAAACAGGTGCCAGGTaGAATTTGTCTGTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLKTGAR*NLSVFV
Trigger: CACAAACACAGACAAATTCCACCTGGCACCTGTTTT...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACAATTGGGGTTAACTTaGTTGTCCAGTTGCCCATTA +
Preference number: 4 (lower is better)
Translates to: LAVHLFCVIMITKARLFQQLGLT*LSSCPL
Trigger: TAATGGGCAACTGGACAACCAAGTTAACCCCAATTG...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CAA 72 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTaGCTTTCAACTATTGAATTAGAGATACTTATTGGC +
Preference number: 4 (lower is better)
Translates to: FILTPKPRLACR*LSTIELEILIG
Trigger: GCCAATAAGTATCTCTAATTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACTTTTCCACTAGCCGCTaGTACCAACTGTTAGTACTT +
Preference number: 4 (lower is better)
Translates to: NNPVLYTLRIQKESILSYFSTSR*YQLLVL
Trigger: AAGTACTAACAGTTGGTAGCAGCGGCTAGTGGAAAA...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR GCA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACACAGGAATATGTCCATaGAACACAGCAAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNTGICP*NTAKVR
Trigger: TCTGACTTTTGCTGTGTTGCATGGACATATTCCTGT...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CCA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAATTGCAAATGATCATGTaGAAGAGAGGCCTTGTGTAT +
Preference number: 4 (lower is better)
Translates to: LAVHLFCVIMITKARLFQLQMIM*KRGLVY
Trigger: ATACACAAGGCCTCTCTTCCACATGATCATTTGCAA...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACTGTGTATCTGTAGCTTaGACTCTTCTTCAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: NNPVLYTLRIQKESILSYCVSVA*TLLQAV
Trigger: AACTGCCTGAAGAAGAGTCCAAGCTACAGATACACA...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
3UTR CAA 72 bp CACACACAAAAATTAGTTGTAAACACCAGCGCACTTTaGTTTACAAATAAGCCCACATCCTCGAGACTAAAA +
Preference number: 4 (lower is better)
Translates to: HTQKLVVNTSAL*FTNKPTSSRLK
Trigger: TTTTAGTCTCGAGGATGTGGGCTTATTTGTAAACAAAAGTGCGCTGGTGTTTACAACTAATTTTTGTGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR GCA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTCAGTATCTTATCAGATaGATGTTTACACAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPQYLIR*MFTQCG
Trigger: TCCACACTGTGTAAACATGCATCTGATAAGATACTG...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTAAACCACGATTAGCATaGAGGTTGCTTTCAACTATT +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLKPRLA*RLLSTI
Trigger: AATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTT...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR GCA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACCAGTATCTTATCAGATaGATGTTTACACAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: NNPVLYTLRIQKESILSYQYLIR*MFTQCG
Trigger: TCCACACTGTGTAAACATGCATCTGATAAGATACTG...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CCA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTTTATCTGGAATACTGTaGCACTTTACCAATCTCTTT +
Preference number: 4 (lower is better)
Translates to: AVHLFCVIMITKARLFQLLSGIL*HFTNLF
Trigger: AAAGAGATTGGTAAAGTGCCACAGTATTCCAGATAA...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS TCA 90 bp GGCCGCACCAGGGCCCGAGCTCGGGCCTGGGCCGGAGCCCGAGCCTaGCCCAGGGCCACTGCAGCTCCGGGGCACCCCGGAGGCCACGAC +
Preference number: 5 (lower is better)
Translates to: GRTRARARAWAGARA*PRATAAPGHPGGHD
Trigger: GTCGTGGCCTCCGGGGTGCCCCGGAGCTGCAGTGGCCCTGGGTCAGGCTCGGGCTCCGGCCCAGGCCCGAGCTCGGGCCCTGGTGCGGCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS CCA 90 bp CCGCGGGCAGCTGGCTCCCGGCTCCCGGCTCCCAGTTCCCGGCCCTaGTTCGCTCGGCGCCAGCCTGCCCTGCACCGGAGCGCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: PRAAGSRLPAPSSRP*FARRQPALHRSAAA
Trigger: CGCTGCTGCGCTCCGGTGCAGGGCAGGCTGGCGCCGAGCGAACCAGGGCCGGGAACTGGGAGCCGGGAGCCGGGAGCCAGCTGCCCGCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS CCA 90 bp ACTTGGGCGCCTCGTGGAGCGCATGGTGGTGGTGATGGTGGTGGTTaGCGGCGGCTGCCGGCGGGACTGCGGCGGCCGCGGCGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: TWAPRGAHGGGDGGG*RRLPAGLRRPRRPA
Trigger: CGCCGGCCGCCGCGGCCGCCGCAGTCCCGCCGGCAGCCGCCGCCAACCACCACCATCACCACCACCATGCGCTCCACGAGGCGCCCAAGT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS GCA 90 bp CGCAGCGGGCCGACTTGCCGCGGCCCAGGCGGTCGCCGCCGGCGCTaGTCATGTTGTAGAGGGACAGTGCGGCCAGCGCAGCCGCCGTAC +
Preference number: 5 (lower is better)
Translates to: RSGPTCRGPGGRRRR*SCCRGTVRPAQPPY
Trigger: GTACGGCGGCTGCGCTGGCCGCACTGTCCCTCTACAACATGAGCAGCGCCGGCGGCGACCGCCTGGGCCGCGGCAAGTCGGCCCGCTGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS GCA 90 bp GCAGCCGGGCCGCCTGGCGGACGTCGTCGCTGTCCATGGAGAAGCTaGGGCGGTGGCCGGCGTGCGCCACGGCCACCCGGATCCACTCCA +
Preference number: 5 (lower is better)
Translates to: AAGPPGGRRRCPWRS*GGGRRAPRPPGSTP
Trigger: TGGAGTGGATCCGGGTGGCCGTGGCGCACGCCGGCCACCGCCGCAGCTTCTCCATGGACAGCGACGACGTCCGCCAGGCGGCCCGGCTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS GCA 90 bp GCCCAGGCGGTCGCCGCCGGCGCTGCTCATGTTGTAGAGGGACAGTaGGGCCAGCGCAGCCGCCGTACAGTGCGCGGCCAGGCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: AQAVAAGAAHVVEGQ*GQRSRRTVRGQAPG
Trigger: TCCTGGGGCCTGGCCGCGCACTGTACGGCGGCTGCGCTGGCCGCACTGTCCCTCTACAACATGAGCAGCGCCGGCGGCGACCGCCTGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS CCA 90 bp GTCCAGGGGACCTCGTCTAGGTCCGGCAGCAGCCGCGAGCAGTGCTaGCCGGCGCAGTCCAGCCCCTCGGAGTCTTCCACCAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: VQGTSSRSGSSREQC*PAQSSPSESSTRAV
Trigger: CACTGCCCTGGTGGAAGACTCCGAGGGGCTGGACTGCGCCGGCCAGCACTGCTCGCGGCTGCTGCCGGACCTAGACGAGGTCCCCTGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS GCA 90 bp AGAGTCCAGGGGACCTCGTCTAGGTCCGGCAGCAGCCGCGAGCAGTaGTGGCCGGCGCAGTCCAGCCCCTCGGAGTCTTCCACCAGGGCA +
Preference number: 5 (lower is better)
Translates to: RVQGTSSRSGSSREQ*WPAQSSPSESSTRA
Trigger: TGCCCTGGTGGAAGACTCCGAGGGGCTGGACTGCGCCGGCCAGCACTGCTCGCGGCTGCTGCCGGACCTAGACGAGGTCCCCTGGACTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS CCA 90 bp TACAGAGCAGACCCTGGAGTCATCTTCCAGAGTCCGGGCCGGAGCTaGGCGCAATGGGGAGCGAGCCAGGCCGGGAAGGAAGCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: YRADPGVIFQSPGRS*AQWGASQAGKEAPA
Trigger: GGCGGGAGCTTCCTTCCCGGCCTGGCTCGCTCCCCATTGCGCCCAGCTCCGGCCCGGACTCTGGAAGATGACTCCAGGGTCTGCTCTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS CCA 90 bp TTACCTCTCCTGGCCATCGCTGCGCCACTTCATGCTGCAGCCGCCTaGGAGCCAAAGGGAAGGAGCGGCGAGGAGCAGCGAGTGCCGCGG +
Preference number: 5 (lower is better)
Translates to: LPLLAIAAPLHAAAA*EPKGRSGEEQRVPR
Trigger: CCGCGGCACTCGCTGCTCCTCGCCGCTCCTTCCCTTTGGCTCCCAGGCGGCTGCAGCATGAAGTGGCGCAGCGATGGCCAGGAGAGGTAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS GCA 90 bp CACGGGCTTCTTACCTCTCCTGGCCATCGCTGCGCCACTTCATGCTaGAGCCGCCTGGGAGCCAAAGGGAAGGAGCGGCGAGGAGCAGCG +
Preference number: 5 (lower is better)
Translates to: HGLLTSPGHRCATSC*SRLGAKGKERRGAA
Trigger: CGCTGCTCCTCGCCGCTCCTTCCCTTTGGCTCCCAGGCGGCTGCAGCATGAAGTGGCGCAGCGATGGCCAGGAGAGGTAAGAAGCCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS CCA 90 bp CAGTGCGCGGCCAGGCCCCAGGACAGCACGATCTCCATGGCGCTCTaGATCTCGTACTTGGTGCACTTGGCGAAGCGCAGGCTCAGGCGC +
Preference number: 5 (lower is better)
Translates to: QCAARPQDSTISMAL*ISYLVHLAKRRLRR
Trigger: GCGCCTGAGCCTGCGCTTCGCCAAGTGCACCAAGTACGAGATCCAGAGCGCCATGGAGATCGTGCTGTCCTGGGGCCTGGCCGCGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS CCA 90 bp CCGCCGTACAGTGCGCGGCCAGGCCCCAGGACAGCACGATCTCCATaGCGCTCTGGATCTCGTACTTGGTGCACTTGGCGAAGCGCAGGC +
Preference number: 5 (lower is better)
Translates to: PPYSARPGPRTARSP*RSGSRTWCTWRSAG
Trigger: GCCTGCGCTTCGCCAAGTGCACCAAGTACGAGATCCAGAGCGCCATGGAGATCGTGCTGTCCTGGGGCCTGGCCGCGCACTGTACGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS GCA 90 bp CACCACGGGCTTCTTACCTCTCCTGGCCATCGCTGCGCCACTTCATaGTGCAGCCGCCTGGGAGCCAAAGGGAAGGAGCGGCGAGGAGCA +
Preference number: 5 (lower is better)
Translates to: HHGLLTSPGHRCATS*CSRLGAKGKERRGA
Trigger: TGCTCCTCGCCGCTCCTTCCCTTTGGCTCCCAGGCGGCTGCAGCATGAAGTGGCGCAGCGATGGCCAGGAGAGGTAAGAAGCCCGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS GCA 90 bp TCAGCTAGAGGCGGCCAGCAGCTCCCGCCATACGGGGACGCCGGGTaGGAGTCGGAACAGCACAAAGACAAGTTGGAGGAGCGCACCGAG +
Preference number: 5 (lower is better)
Translates to: SARGGQQLPPYGDAG*ESEQHKDKLEERTE
Trigger: CTCGGTGCGCTCCTCCAACTTGTCTTTGTGCTGTTCCGACTCGCACCCGGCGTCCCCGTATGGCGGGAGCTGCTGGCCGCCTCTAGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS CCA 90 bp GCTGCCTCCCGGAACTGCCGCCGCTGGAATATACAGAGCAGACCCTaGAGTCATCTTCCAGAGTCCGGGCCGGAGCTGGGCGCAATGGGG +
Preference number: 5 (lower is better)
Translates to: AASRNCRRWNIQSRP*SHLPESGPELGAMG
Trigger: CCCCATTGCGCCCAGCTCCGGCCCGGACTCTGGAAGATGACTCCAGGGTCTGCTCTGTATATTCCAGCGGCGGCAGTTCCGGGAGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS CCA 90 bp CATACGGGGACGCCGGGTGCGAGTCGGAACAGCACAAAGACAAGTTaGAGGAGCGCACCGAGTCCGCCGCGCCACCATAACCCGAGTCCA +
Preference number: 5 (lower is better)
Translates to: HTGTPGASRNSTKTS*RSAPSPPRHHNPSP
Trigger: TGGACTCGGGTTATGGTGGCGCGGCGGACTCGGTGCGCTCCTCCAACTTGTCTTTGTGCTGTTCCGACTCGCACCCGGCGTCCCCGTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS CCA 90 bp GCGTCAGATCCTCCAGCGTTCTCACCACGGGCTTCTTACCTCTCCTaGCCATCGCTGCGCCACTTCATGCTGCAGCCGCCTGGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: ASDPPAFSPRASYLS*PSLRHFMLQPPGSQ
Trigger: TTGGCTCCCAGGCGGCTGCAGCATGAAGTGGCGCAGCGATGGCCAGGAGAGGTAAGAAGCCCGTGGTGAGAACGCTGGAGGATCTGACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS-3UTR CAA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTTGGCCAGCGCGTCCTaGGGCAGGCCGCCGGGGACC +
Preference number: 5 (lower is better)
Translates to: GWGRFANDHVEERPCVSALASAS*GRPPGT
Trigger: GGTCCCCGGCGGCCTGCCCAAGGACGCGCTGGCCAA...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS TCA 90 bp GGCCGGCGCAGTCCAGCCCCTCGGAGTCTTCCACCAGGGCAGTGTTaGCAGTGTCAAAGCTGTTGTGCCGGCTGTGCATGGAGTCAGCTA +
Preference number: 5 (lower is better)
Translates to: GRRSPAPRSLPPGQC*QCQSCCAGCAWSQL
Trigger: TAGCTGACTCCATGCACAGCCGGCACAACAGCTTTGACACTGTCAACACTGCCCTGGTGGAAGACTCCGAGGGGCTGGACTGCGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS TCA 90 bp TCCAGAGTAGTGGGAGAGCCTTTGGAGACATCCGGACCGCACCGGTaGCCCCGGGGCAGGCTCTCTGGAATCCTTGGGCCTCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: SRVVGEPLETSGPHR*PRGRLSGILGPQFP
Trigger: AGGAAACTGAGGCCCAAGGATTCCAGAGAGCCTGCCCCGGGGTCACCGGTGCGGTCCGGATGTCTCCAAAGGCTCTCCCACTACTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS GCA 90 bp GAGAGCCGAGTCCGCGCCGCCTTGGCTCACTTTTCCACTAGCCGCTaGTACCAACTGTTAGTACTTTCGGCTGCCTCCCGGAACTGCCGC +
Preference number: 5 (lower is better)
Translates to: ESRVRAALAHFSTSR*YQLLVLSAASRNCR
Trigger: GCGGCAGTTCCGGGAGGCAGCCGAAAGTACTAACAGTTGGTAGCAGCGGCTAGTGGAAAAGTGAGCCAAGGCGGCGCGGACTCGGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS GCA 90 bp TCCACCAGGGCAGTGTTGACAGTGTCAAAGCTGTTGTGCCGGCTGTaGATGGAGTCAGCTAGAGGCGGCCAGCAGCTCCCGCCATACGGG +
Preference number: 5 (lower is better)
Translates to: STRAVLTVSKLLCRL*MESARGGQQLPPYG
Trigger: CCCGTATGGCGGGAGCTGCTGGCCGCCTCTAGCTGACTCCATGCACAGCCGGCACAACAGCTTTGACACTGTCAACACTGCCCTGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS CCA 90 bp ACGCGCGTGGCCAGCAAAGACTGCTCGATGGTCCTCAGCTCCGACTaGCTGAACATGGGCAGTTCCCCTGGCTTGTTTGACCGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: TRVASKDCSMVLSSD*LNMGSSPGLFDRCG
Trigger: CCCACAGCGGTCAAACAAGCCAGGGGAACTGCCCATGTTCAGCCAGTCGGAGCTGAGGACCATCGAGCAGTCTTTGCTGGCCACGCGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS-3UTR CAA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGAGGCGCTGCGCCTCTTaGGCTATGCGCACCAGCGCC +
Preference number: 5 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGRRCAS*AMRTSA
Trigger: GGCGCTGGTGCGCATAGCCAAAGAGGCGCAGCGCCT...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS TCA 90 bp GCGTGGCCAGCAAAGACTGCTCGATGGTCCTCAGCTCCGACTGGCTaGACATGGGCAGTTCCCCTGGCTTGTTTGACCGCTGTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: AWPAKTARWSSAPTG*TWAVPLACLTAVGL
Trigger: GAGACCCACAGCGGTCAAACAAGCCAGGGGAACTGCCCATGTTCAGCCAGTCGGAGCTGAGGACCATCGAGCAGTCTTTGCTGGCCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS GCA 90 bp TCGGAGTCTTCCACCAGGGCAGTGTTGACAGTGTCAAAGCTGTTGTaGCGGCTGTGCATGGAGTCAGCTAGAGGCGGCCAGCAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: SESSTRAVLTVSKLL*RLCMESARGGQQLP
Trigger: CGGGAGCTGCTGGCCGCCTCTAGCTGACTCCATGCACAGCCGGCACAACAGCTTTGACACTGTCAACACTGCCCTGGTGGAAGACTCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS-3UTR CAA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGGCCCTCAGTTTGGCCTaGCTGTTGCGGCTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: VATKSSQASKCTSTPACQALSLA*LLRLAH
Trigger: GTGCGCCAGCCGCAACAGCAAGGCCAAACTGAGGGC...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS TCA 90 bp CTGACAACCTCCACATTCAGGTCAGCTCCGGCATCCAGCAGCATCTaGACCATCGCCTCGTCCCCACGGACGCAGGCATACATCAGGGGA +
Preference number: 5 (lower is better)
Translates to: LTTSTFRSAPASSSI*TIASSPRTQAYIRG
Trigger: TCCCCTGATGTATGCCTGCGTCCGTGGGGACGAGGCGATGGTTCAGATGCTGCTGGATGCCGGAGCTGACCTGAATGTGGAGGTTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
CDS GCA 90 bp TCACTCAATTCGGCGATGCTGCCTACGCGCGTGGCCAGCAAAGACTaGTCGATGGTCCTCAGCTCCGACTGGCTGAACATGGGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: SLNSAMLPTRVASKD*SMVLSSDWLNMGSS
Trigger: GGAACTGCCCATGTTCAGCCAGTCGGAGCTGAGGACCATCGAGCAGTCTTTGCTGGCCACGCGCGTAGGCAGCATCGCCGAATTGAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS GCA 90 bp CTGCTTAAACTTGGCTTCGATGGCCACCGCATCCAGCTTTCGAGATaGACAAAAGCAGTCGTCGGCCCTGAGCTGGCGCGGCTCGCAGTC +
Preference number: 5 (lower is better)
Translates to: LLKLGFDGHRIQLSR*TKAVVGPELARLAV
Trigger: GACTGCGAGCCGCGCCAGCTCAGGGCCGACGACTGCTTTTGTGCATCTCGAAAGCTGGATGCGGTGGCCATCGAAGCCAAGTTTAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS TCA 90 bp AACATGGGCAGTTCCCCTGGCTTGTTTGACCGCTGTGGGTCTCTGTaGAGATTCAGGCTGTCTGGTAGGCACAGCACCCCGCTGGCGTTC +
Preference number: 5 (lower is better)
Translates to: NMGSSPGLFDRCGSL*RFRLSGRHSTPLAF
Trigger: GAACGCCAGCGGGGTGCTGTGCCTACCAGACAGCCTGAATCTTCACAGAGACCCACAGCGGTCAAACAAGCCAGGGGAACTGCCCATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS GCA 90 bp TCGCTCATGGTGTTGATCCCATCGGGCCCCAGCAGAGACACTGCCTaGTTCACCAGGTCTGTTCGTCCACAGTTCAGCATCCGGAAACCC +
Preference number: 5 (lower is better)
Translates to: SLMVLIPSGPSRDTA*FTRSVRPQFSIRKP
Trigger: GGGTTTCCGGATGCTGAACTGTGGACGAACAGACCTGGTGAAGCAGGCAGTGTCTCTGCTGGGGCCCGATGGGATCAACACCATGAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS-3UTR CAA 90 bp GGAAGCAGGCGTGGGCTTCATGACTGTGGGATGCTCAGTTTGAGGAAAGCCAGGTCGTACTTGGTGCACTaGGCGAAGCGCAGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GSRRGLHDCGMLSLRKARSYLVH*AKRRLR
Trigger: CCTGAGCCTGCGCTTCGCCAAGTGCACCAAGTACGA...CCTGGCTTTCCTCAAACTGAGCATCCCACAGTCATGAAGCCCACGCCTGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGGGCAGTTCCCCTGGCTaGTTTGACCGCTGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGGSSPG*FDRCGS
Trigger: AGACCCACAGCGGTCAAACAAGCCAGGGGAACTGCC...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGGGCAGTTCCCCTGGCTaGTTTGACCGCTGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: VATKSSQASKCTSTPACQGSSPG*FDRCGS
Trigger: AGACCCACAGCGGTCAAACAAGCCAGGGGAACTGCC...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GGAAGCAGGCGTGGGCTTCATGACTGTGGGATGCTCAGTTTGAGGAAAGCCAGGGCTGCAGGTGATGCATaGCACGGGACACCAGGTCAC +
Preference number: 5 (lower is better)
Translates to: GSRRGLHDCGMLSLRKARAAGDA*HGTPGH
Trigger: GTGACCTGGTGTCCCGTGCAATGCATCACCTGCAGC...CCTGGCTTTCCTCAAACTGAGCATCCCACAGTCATGAAGCCCACGCCTGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GGAAGCAGGCGTGGGCTTCATGACTGTGGGATGCTCAGTTTGAGGAAAGCCAGGTGTTCGCTCATGGTGTaGATCCCATCGGGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: GSRRGLHDCGMLSLRKARCSLMV*IPSGPS
Trigger: GCTGGGGCCCGATGGGATCAACACCATGAGCGAACA...CCTGGCTTTCCTCAAACTGAGCATCCCACAGTCATGAAGCCCACGCCTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACCATCAGGGGCAGGCCTaGGGTAACGAGCTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHHQGQA*GNELLR
Trigger: ACGGAGGAGCTCGTTACCCAAGGCCTGCCCCTGATG...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS GCA 90 bp CTGTTCGCTCATGGTGTTGATCCCATCGGGCCCCAGCAGAGACACTaGCTGCTTCACCAGGTCTGTTCGTCCACAGTTCAGCATCCGGAA +
Preference number: 5 (lower is better)
Translates to: LFAHGVDPIGPQQRH*LLHQVCSSTVQHPE
Trigger: TTCCGGATGCTGAACTGTGGACGAACAGACCTGGTGAAGCAGGCAGTGTCTCTGCTGGGGCCCGATGGGATCAACACCATGAGCGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS-3UTR CAA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCCATTGCCGTGGTGCTaGGCATTGAGGGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPPLPWC*ALRGCR
Trigger: CCTGCAGCCCCTCAATGCCAAGCACCACGGCAATGG...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGGGCTGGGCGAGCAGTTaGCGGAACACATTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: VATKSSQASKCTSTPACQGWASS*RNTFLC
Trigger: ACACAGGAATGTGTTCCGCAAACTGCTCGCCCAGCC...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGGCCCTCAGTTTGGCCTaGCTGTTGCGGCTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: GRFANDHVEERPCVSASQALSLA*LLRLAH
Trigger: GTGCGCCAGCCGCAACAGCAAGGCCAAACTGAGGGC...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS GCA 90 bp AGCCGCTGCTACCAACTGTTAGTACTTTCGGCTGCCTCCCGGAACTaGCGCCGCTGGAATATACAGAGCAGACCCTGGAGTCATCTTCCA +
Preference number: 5 (lower is better)
Translates to: SRCYQLLVLSAASRN*RRWNIQSRPWSHLP
Trigger: TGGAAGATGACTCCAGGGTCTGCTCTGTATATTCCAGCGGCGGCAGTTCCGGGAGGCAGCCGAAAGTACTAACAGTTGGTAGCAGCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS CCA 90 bp TACCAACTGTTAGTACTTTCGGCTGCCTCCCGGAACTGCCGCCGCTaGAATATACAGAGCAGACCCTGGAGTCATCTTCCAGAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: YQLLVLSAASRNCRR*NIQSRPWSHLPESG
Trigger: CCCGGACTCTGGAAGATGACTCCAGGGTCTGCTCTGTATATTCCAGCGGCGGCAGTTCCGGGAGGCAGCCGAAAGTACTAACAGTTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS-3UTR CAA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGACAGCACAAAGACAAGTaGGAGGAGCGCACCGAGTCC +
Preference number: 5 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRQHKDK*EERTES
Trigger: GGACTCGGTGCGCTCCTCCAACTTGTCTTTGTGCTG...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGACAGTGTCAAAGCTGTaGTGCCGGCTGTGCATGGAG +
Preference number: 5 (lower is better)
Translates to: VATKSSQASKCTSTPACQTVSKL*CRLCME
Trigger: CTCCATGCACAGCCGGCACAACAGCTTTGACACTGT...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCTTGGCCAGCGCGTCCTaGGGCAGGCCGCCGGGGACC +
Preference number: 5 (lower is better)
Translates to: TSSRIFPDDITINASAVALASAS*GRPPGT
Trigger: GGTCCCCGGCGGCCTGCCCAAGGACGCGCTGGCCAA...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGACTCTGGATCTCGTACTaGGTGCACTTGGCGAAGCGC +
Preference number: 5 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRLWISY*VHLAKR
Trigger: GCGCTTCGCCAAGTGCACCAAGTACGAGATCCAGAG...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACACCTGGAGGTTGACTTaGGAAGGCTCCACGTTGGGG +
Preference number: 5 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHTWRLT*EGSTLG
Trigger: CCCCAACGTGGAGCCTTCCAAAGTCAACCTCCAGGT...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGCTTTCCACCTGGAGGTaGACTTTGGAAGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: VATKSSQASKCTSTPACQLSTWR*TLEGST
Trigger: CGTGGAGCCTTCCAAAGTCAACCTCCAGGTGGAAAG...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGAGTTTGGCCTTGCTGTaGCGGCTGGCGCACAAGGGG +
Preference number: 5 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKSLALL*RLAHKG
Trigger: CCCCTTGTGCGCCAGCCGCAACAGCAAGGCCAAACT...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAACTCAGGGCCCTCAGTTaGGCCTTGCTGTTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQLRALS*ALLLRL
Trigger: CAGCCGCAACAGCAAGGCCAAACTGAGGGCCCTGAG...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS TCA 90 bp AACATGGGCAGTTCCCCTGGCTTGTTTGACCGCTGTGGGTCTCTGTaGAGATTCAGGCTGTCTGGTAGGCACAGCACCCCTTTACGACTG +
Preference number: 5 (lower is better)
Translates to: NMGSSPGLFDRCGSL*RFRLSGRHSTPLRL
Trigger: CAGTCGTAAAGGGGTGCTGTGCCTACCAGACAGCCTGAATCTTCACAGAGACCCACAGCGGTCAAACAAGCCAGGGGAACTGCCCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415943.6
CDS GCA 90 bp GTCTTAAACTCCTTTAACAAGCACTGGATGAGAGGCCTGCGGTGCTaGTGGAAGGCGATCCGCAAAGACTCCAGCCACGTGTGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: VLNSFNKHWMRGLRC*WKAIRKDSSHVCRV
Trigger: GACTCTGCACACGTGGCTGGAGTCTTTGCGGATCGCCTTCCAGCAGCACCGCAGGCCTCTCATCCAGTGCTTGTTAAAGGAGTTTAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
CDS CCA 90 bp TCTGGAGCGGCGGAAAACCAATCAGCGCCCCGTGTTATTTCTATTTaGGGCTCCCTGATTGTGGACCCAAGCCTAAGGTGTCCGCTAGCA +
Preference number: 5 (lower is better)
Translates to: SGAAENQSAPRVISI*GSLIVDPSLRCPLA
Trigger: TGCTAGCGGACACCTTAGGCTTGGGTCCACAATCAGGGAGCCCCAAATAGAAATAACACGGGGCGCTGATTGGTTTTCCGCCGCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS-3UTR CAA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCAAGTTTGGCCTTGCTGTaGCGGCTGGCGCACAAGGGG +
Preference number: 5 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPSLALL*RLAHKG
Trigger: CCCCTTGTGCGCCAGCCGCAACAGCAAGGCCAAACT...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACAGAAGCCCTTCCTGTTaGGGAGGACTGAGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHRSPSC*GGLRSQ
Trigger: CTGACTCCTCAGTCCTCCCAAACAGGAAGGGCTTCT...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS TCA 90 bp AAGGCTCCACGTTGGGGTTTTCCCATTCCATTTGTGGGCAGTGCATaGAATAGCAAAGGGTGTACAGGGCCTCGGGCTCCCAGTACAGTG +
Preference number: 5 (lower is better)
Translates to: KAPRWGFPIPFVGSA*NSKGCTGPRAPSTV
Trigger: CACTGTACTGGGAGCCCGAGGCCCTGTACACCCTTTGCTATTTCATGCACTGCCCACAAATGGAATGGGAAAACCCCAACGTGGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS GCA 90 bp ATGGTCTTAAACTCCTTTAACAAGCACTGGATGAGAGGCCTGCGGTaGTGCTGGAAGGCGATCCGCAAAGACTCCAGCCACGTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: MVLNSFNKHWMRGLR*CWKAIRKDSSHVCR
Trigger: TCTGCACACGTGGCTGGAGTCTTTGCGGATCGCCTTCCAGCAGCACCGCAGGCCTCTCATCCAGTGCTTGTTAAAGGAGTTTAAGACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
CDS-3UTR CAA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGCAGCACAAAGACAAGTaGGAGGAGCGCACCGAGTCC +
Preference number: 5 (lower is better)
Translates to: GRFANDHVEERPCVSASQQHKDK*EERTES
Trigger: GGACTCGGTGCGCTCCTCCAACTTGTCTTTGTGCTG...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCATCGTACTTGGTGCACTaGGCGAAGCGCAGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPSYLVH*AKRRLR
Trigger: CCTGAGCCTGCGCTTCGCCAAGTGCACCAAGTACGA...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp GGGTGTTTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTGTCTCCACGGTGAACTaGGGCGCCTCGTGGAGCGCA +
Preference number: 5 (lower is better)
Translates to: GCFILTPKPRLACRLLSTVSTVN*GASWSA
Trigger: TGCGCTCCACGAGGCGCCCAAGTTCACCGTGGAGAC...AGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAAACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCATCTCCGAGTCGTTGTaGACCGTGTGCTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGISESL*TVCSRV
Trigger: GACCCTGGAGCACACGGTCAACAACGACTCGGAGAT...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCAGGTCCTGCTTAAACTaGGCTTCGATGGCCACCGCA +
Preference number: 5 (lower is better)
Translates to: GWGRFANDHVEERPCVSARSCLN*ASMATA
Trigger: TGCGGTGGCCATCGAAGCCAAGTTTAAGCAGGACCT...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTAGTTTGGCCTTGCTGTaGCGGCTGGCGCACAAGGGG +
Preference number: 5 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTSLALL*RLAHKG
Trigger: CCCCTTGTGCGCCAGCCGCAACAGCAAGGCCAAACT...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp ATGAAGCGATGTGACATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACCTCAGGGCCCTCAGTTaGGCCTTGCTGTTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: MKRCDIGPLNNGSGSSYNLRALS*ALLLRL
Trigger: CAGCCGCAACAGCAAGGCCAAACTGAGGGCCCTGAG...GTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGCTCAGGGCCCTCAGTTaGGCCTTGCTGTTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRLRALS*ALLLRL
Trigger: CAGCCGCAACAGCAAGGCCAAACTGAGGGCCCTGAG...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACCCATCATTTGTCGGCTaGCTGGAGAGGAGTGCTTTG +
Preference number: 5 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHPSFVG*LERSAL
Trigger: CAAAGCACTCCTCTCCAGCAAGCCGACAAATGATGG...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACTGTGGGATGCTCAGTTaGAGGAAAGCCAGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHCGMLS*RKARRR
Trigger: TCTCCTCCTGGCTTTCCTCAAACTGAGCATCCCACA...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS TCA 90 bp AGGGGCAGGCCTTGGGTAACGAGCTCCTCCGTGTATTCCTCCTCCTaGATGGTCTTAAACTCCTTTAACAAGCACTGGATGAGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: RGRPWVTSSSVYSSS*MVLNSFNKHWMRGL
Trigger: CAGGCCTCTCATCCAGTGCTTGTTAAAGGAGTTTAAGACCATTCAGGAGGAGGAATACACGGAGGAGCTCGTTACCCAAGGCCTGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
CDS GCA 90 bp AGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGCATTCCCTaGACTAGGCGTTTCATACCACGGAACCTTTGGAAGACGACAAGT +
Preference number: 5 (lower is better)
Translates to: SQCGRRTGKFPGSIP*TRRFIPRNLWKTTS
Trigger: ACTTGTCGTCTTCCAAAGGTTCCGTGGTATGAAACGCCTAGTGCAGGGAATGCTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS CCA 90 bp GTTGACTTTGGAAGGCTCCACGTTGGGGTTTTCCCATTCCATTTGTaGGCAGTGCATGAAATAGCAAAGGGTGTACAGGGCCTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: VDFGRLHVGVFPFHL*AVHEIAKGVQGLGL
Trigger: GAGCCCGAGGCCCTGTACACCCTTTGCTATTTCATGCACTGCCCACAAATGGAATGGGAAAACCCCAACGTGGAGCCTTCCAAAGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS CCA 90 bp AGCAAAAGTCAGAGCCGTCCAATGGCGGGTCTCGGGGTGGACGGATaGATATTTATGAGGAGTACTGACAACCTCCACATTCAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: SKSQSRPMAGLGVDG*IFMRSTDNLHIQVS
Trigger: GCTGACCTGAATGTGGAGGTTGTCAGTACTCCTCATAAATATCCATCCGTCCACCCCGAGACCCGCCATTGGACGGCTCTGACTTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
CDS-3UTR CAA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCACCAGCGTCGACAGCTaGGCCAGCGCGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: TSSRIFPDDITINASAVATSVDS*ASASLG
Trigger: GCCCAAGGACGCGCTGGCCAAGCTGTCGACGCTGGT...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGATTGGAAGGCTCCACGTaGGGGTTTTCCCATTCCATT +
Preference number: 5 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRLEGST*GFSHSI
Trigger: AATGGAATGGGAAAACCCCAACGTGGAGCCTTCCAA...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTCTGAACAATCTTTCCACCTGGAGGTaGACTTTGGAAGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: DAPWAMPMKRCDIGPLNNLSTWR*TLEGST
Trigger: CGTGGAGCCTTCCAAAGTCAACCTCCAGGTGGAAAG...ATTGTTCAGAGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGAGGTCCTGCTTAAACTaGGCTTCGATGGCCACCGCA +
Preference number: 5 (lower is better)
Translates to: GRFANDHVEERPCVSASQRSCLN*ASMATA
Trigger: TGCGGTGGCCATCGAAGCCAAGTTTAAGCAGGACCT...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GGGTGCTTTCAATTGGGGTTAACTTGGTTGTCCAGTTGCCCATTAAACTCTGGACATCAGGGGCAGGCCTaGGGTAACGAGCTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: GCFQLGLTWLSSCPLNSGHQGQA*GNELLR
Trigger: ACGGAGGAGCTCGTTACCCAAGGCCTGCCCCTGATG...TCCAGAGTTTAATGGGCAACTGGACAACCAAGTTAACCCCAATTGAAAGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGCTGATCACTTCATTCTaGCTCGCTTTCAGGATCTCA +
Preference number: 5 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVLITSF*LAFRIS
Trigger: TGAGATCCTGAAAGCGAGCAAGAATGAAGTGATCAG...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGTGCAGGTGCCATCATTaGTCGGCTTGCTGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: GRFANDHVEERPCVSASQCRCHH*SACWRG
Trigger: TCCTCTCCAGCAAGCCGACAAATGATGGCACCTGCA...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAAGGGGCTGGGGGAGGTTaGCAAATGATCATGTGGAAG +
Preference number: 5 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQGAGGG*QMIMWK
Trigger: CTTCCACATGATCATTTGCAAACCTCCCCCAGCCCC...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGCTGTGTATCTGTAGCTaGGACTCTTCTTCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGLCICS*DSSSGS
Trigger: ACTGCCTGAAGAAGAGTCCAAGCTACAGATACACAG...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS GCA 90 bp CTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTaGCACTCACCCAAGGGACCTATGATAGCCAACACCACAATGGAT +
Preference number: 5 (lower is better)
Translates to: LPDTSMQAGDPSLQK*HSPKGPMIANTTMD
Trigger: ATCCATTGTGGTGTTGGCTATCATAGGTCCCTTGGGTGAGTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS CCA 90 bp CTGTGTCCGTGGGCTGCAGCCTGGCTGAAAGAGTTCATATCACCCTaGGGGGTTGTAGAAATTCCATTCCTGTACATGGTTCCTATCAGG +
Preference number: 5 (lower is better)
Translates to: LCPWAAAWLKEFISP*GVVEIPFLYMVPIR
Trigger: CCTGATAGGAACCATGTACAGGAATGGAATTTCTACAACCCCCCAGGGTGATATGAACTCTTTCAGCCAGGCTGCAGCCCACGGACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000490090.6
CDS-3UTR CAA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAACAGTGTCAAAGCTGTaGTGCCGGCTGTGCATGGAG +
Preference number: 5 (lower is better)
Translates to: CLCLCKANAAGELESSRETVSKL*CRLCME
Trigger: CTCCATGCACAGCCGGCACAACAGCTTTGACACTGT...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCGTCTCCACGGTGAACTaGGGCGCCTCGTGGAGCGCA +
Preference number: 5 (lower is better)
Translates to: TSSRIFPDDITINASAVAVSTVN*GASWSA
Trigger: TGCGCTCCACGAGGCGCCCAAGTTCACCGTGGAGAC...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp CTGTACAAATCAATGCCTGGAGGCCCTGAACTAGCATTAGACATTCACAGGGAAGCTGCAGGTGATGCATaGCACGGGACACCAGGTCAC +
Preference number: 5 (lower is better)
Translates to: LYKSMPGGPELALDIHREAAGDA*HGTPGH
Trigger: GTGACCTGGTGTCCCGTGCAATGCATCACCTGCAGC...TTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTTGTTCGCTCATGGTGTaGATCCCATCGGGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSCSLMV*IPSGPS
Trigger: GCTGGGGCCCGATGGGATCAACACCATGAGCGAACA...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp CAGGAACACGTGGGAGCAGTAGAGGCAGCTCCTTGGCCCAGCCAAAAACAGGTGATAACAGAAGCCTCATaGGGAGTTACCACTGTACAA +
Preference number: 5 (lower is better)
Translates to: QEHVGAVEAAPWPSQKQVITEAS*GVTTVQ
Trigger: TTGTACAGTGGTAACTCCCAATGAGGCTTCTGTTAT...CACCTGTTTTTGGCTGGGCCAAGGAGCTGCCTCTACTGCTCCCACGTGTTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS TCA 90 bp GCGTTTCATACCACGGAACCTTTGGAAGACGACAAGTGGATGGACTaGATTCTGATGGCCAACGTCCTCTGTAAGTCCTGGAGCACATCC +
Preference number: 5 (lower is better)
Translates to: AFHTTEPLEDDKWMD*ILMANVLCKSWSTS
Trigger: GGATGTGCTCCAGGACTTACAGAGGACGTTGGCCATCAGAATTCAGTCCATCCACTTGTCGTCTTCCAAAGGTTCCGTGGTATGAAACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GGGTGTTTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTCTCTGGATCTCGTACTaGGTGCACTTGGCGAAGCGC +
Preference number: 5 (lower is better)
Translates to: GCFILTPKPRLACRLLSTLWISY*VHLAKR
Trigger: GCGCTTCGCCAAGTGCACCAAGTACGAGATCCAGAG...AGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAAACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp CTGTACAAATCAATGCCTGGAGGCCCTGAACTAGCATTAGACATTCACAGGGAACAGATCTCCGAGTCGTaGTTGACCGTGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LYKSMPGGPELALDIHREQISES*LTVCSR
Trigger: CCTGGAGCACACGGTCAACAACGACTCGGAGATCTG...TTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCCCATTGCCGTGGTGCTaGGCATTGAGGGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TSSRIFPDDITINASAVAPLPWC*ALRGCR
Trigger: CCTGCAGCCCCTCAATGCCAAGCACCACGGCAATGG...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGAGGTCCTGCTTAAACTaGGCTTCGATGGCCACCGCA +
Preference number: 5 (lower is better)
Translates to: ENLGFGQKQAETRLLDRRRSCLN*ASMATA
Trigger: TGCGGTGGCCATCGAAGCCAAGTTTAAGCAGGACCT...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTGAAGCCCTCAGTTTGGCCTaGCTGTTGCGGCTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: FILTPKPRLACRLLSTIEALSLA*LLRLAH
Trigger: GTGCGCCAGCCGCAACAGCAAGGCCAAACTGAGGGC...TTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAACCATCATTTGTCGGCTaGCTGGAGAGGAGTGCTTTG +
Preference number: 5 (lower is better)
Translates to: CLCLCKANAAGELESSREPSFVG*LERSAL
Trigger: CAAAGCACTCCTCTCCAGCAAGCCGACAAATGATGG...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp CAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAATGGTCCTAGGGACACAGTTGTCGGTATaGATGCTTTTCGCACAGATA +
Preference number: 5 (lower is better)
Translates to: QSIHWTVVPGSGCSMVLGTQLSV*MLFAQI
Trigger: TATCTGTGCGAAAAGCATCAATACCGACAACTGTGT...CCCTAGGACCATTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAACATACCACGGAACCTTaGGAAGACGACAAGTGGATG +
Preference number: 5 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQHTTEP*EDDKWM
Trigger: CATCCACTTGTCGTCTTCCAAAGGTTCCGTGGTATG...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCCACAGCCTCACCAATTaGCTACCATGGTTGACGTTT +
Preference number: 5 (lower is better)
Translates to: GWGRFANDHVEERPCVSAHSLTN*LPWLTF
Trigger: AAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCATGTGGAAGAGAGGCCTaGTGTATCAGCCTCGCAGAA +
Preference number: 5 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPCGREA*CISLAE
Trigger: TTCTGCGAGGCTGATACACAAGGCCTCTCTTCCACA...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GGCTGGGGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCCTGTGTATCTGTAGCTaGGACTCTTCTTCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: GWGRFANDHVEERPCVSALCICS*DSSSGS
Trigger: ACTGCCTGAAGAAGAGTCCAAGCTACAGATACACAG...GGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCCCCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGATAAGGATGAGTCACTaGAAGCACCAAGCGCAGGGT +
Preference number: 5 (lower is better)
Translates to: GRFANDHVEERPCVSASQIRMSH*KHQAQG
Trigger: ACCCTGCGCTTGGTGCTTCAAGTGACTCATCCTTAT...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS-3UTR CAA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAGGGAAAATCTTGGCTTaGGACAAAAGCAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRGKILA*DKSRQK
Trigger: TTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTCCC...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGATGAGGTTAAATAACTaGTCCACAGTCACACAGCTC +
Preference number: 5 (lower is better)
Translates to: VATKSSQASKCTSTPACQMRLNN*STVTQL
Trigger: GAGCTGTGTGACTGTGGACAAGTTATTTAACCTCAT...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GTGGCTACTAAAAGCAGTCAGGCAAGCAAGTGCACTAGCACCCCAGCCTGCCAGAACACCAGCGCACTTTaGTTTACAAATAAGCCCACA +
Preference number: 5 (lower is better)
Translates to: VATKSSQASKCTSTPACQNTSAL*FTNKPT
Trigger: TGTGGGCTTATTTGTAAACAAAAGTGCGCTGGTGTT...CTGGCAGGCTGGGGTGCTAGTGCACTTGCTTGCCTGACTGCTTTTAGTAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTGAACGAGTCCGCGCCGCCTaGGCTCACTTTTCCACTAGC +
Preference number: 5 (lower is better)
Translates to: FILTPKPRLACRLLSTIERVRAA*AHFSTS
Trigger: GCTAGTGGAAAAGTGAGCCAAGGCGGCGCGGACTCG...TTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTACCAGCGTCGACAGCTaGGCCAGCGCGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPTSVDS*ASASLG
Trigger: GCCCAAGGACGCGCTGGCCAAGCTGTCGACGCTGGT...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACAGGCGCTGCGCCTCTTaGGCTATGCGCACCAGCGCC +
Preference number: 5 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNRRCAS*AMRTSA
Trigger: GGCGCTGGTGCGCATAGCCAAAGAGGCGCAGCGCCT...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTCTGGAGAGGAGTGCTTaGAACCTTGGAGAGGCTGTA +
Preference number: 5 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTLERSA*NLGEAV
Trigger: TACAGCCTCTCCAAGGTTCAAAGCACTCCTCTCCAG...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCACATACCACGGAACCTTaGGAAGACGACAAGTGGATG +
Preference number: 5 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPHTTEP*EDDKWM
Trigger: CATCCACTTGTCGTCTTCCAAAGGTTCCGTGGTATG...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAAAACTTGGTTGTCCAGTaGCCCATTAAACTCTGGACC +
Preference number: 5 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQNLVVQ*PIKLWT
Trigger: GGTCCAGAGTTTAATGGGCAACTGGACAACCAAGTT...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTGGGGCTGGGGGAGGTTaGCAAATGATCATGTGGAAG +
Preference number: 5 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSGAGGG*QMIMWK
Trigger: CTTCCACATGATCATTTGCAAACCTCCCCCAGCCCC...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACCAATGCCAGTTAAAATaGGGTTTCACTCAGTGGCTA +
Preference number: 5 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHQCQLK*GFTQWL
Trigger: TAGCCACTGAGTGAAACCCAATTTTAACTGGCATTG...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp CAACACGGGTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGACAGTGTTGTGATTaGAGGGATGTTTTTAGGGGA +
Preference number: 5 (lower is better)
Translates to: QHGSFQTLPCRLVTRVYRRQCCD*RDVFRG
Trigger: TCCCCTAAAAACATCCCTCAAATCACAACACTGTCT...TCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGACCCGTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GTCCTTCCAGACACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTGCCACACAAGATTTCCACTTTaGGCAAGGAACAGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: VLPDTSMQAGDPSLQKCHTRFPL*ARNRGK
Trigger: TTTTCCCCTGTTCCTTGCCAAAAGTGGAAATCTTGT...GTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGTGTCTGGAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCCAGATCTCCGAGTCGTaGTTGACCGTGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TSSRIFPDDITINASAVAQISES*LTVCSR
Trigger: CCTGGAGCACACGGTCAACAACGACTCGGAGATCTG...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp TATCACCCAGATGCTCCATGGGCCATGCCCATGAAGCGATGTGACATTGGTCCTTCATACAGGAGCTGCTaGAATGCTTCGTTTTCAATG +
Preference number: 5 (lower is better)
Translates to: YHPDAPWAMPMKRCDIGPSYRSC*NASFSM
Trigger: CATTGAAAACGAAGCATTCAAGCAGCTCCTGTATGA...AGGACCAATGTCACATCGCTTCATGGGCATGGCCCATGGAGCATCTGGGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAACCAGTGGAAAGTCCTTaGTTTTTCAACAGGAACACG +
Preference number: 5 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQPVESP*FFNRNT
Trigger: CGTGTTCCTGTTGAAAAACAAAGGACTTTCCACTGG...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGTCAATTGGGGTTAACTaGGTTGTCCAGTTGCCCATT +
Preference number: 5 (lower is better)
Translates to: GRFANDHVEERPCVSASQSIGVN*VVQLPI
Trigger: AATGGGCAACTGGACAACCAAGTTAACCCCAATTGA...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TTAAAAGGCCTCAATCCATTCACTGGACAGTGGTCCCCGGCAGTGGGTGTTCAAAATTTGCTACCATGGTaGACGTTTGCTGAAGCACAG +
Preference number: 5 (lower is better)
Translates to: LKGLNPFTGQWSPAVGVQNLLPW*TFAEAQ
Trigger: CTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATT...TTGAACACCCACTGCCGGGGACCACTGTCCAGTGAATGGATTGAGGCCTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCACCGTGTTATTTCTATTaGGGGCTCCCTGATTGTGGA +
Preference number: 5 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPPCYFY*GLPDCG
Trigger: TCCACAATCAGGGAGCCCCAAATAGAAATAACACGG...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS-3UTR CAA 90 bp GAAAATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGAGATCCTGGCTCTTTaGCTGAGGATTAATTGGGGG +
Preference number: 5 (lower is better)
Translates to: ENLGFGQKQAETRLLDRREILAL*LRINWG
Trigger: CCCCCAATTAATCCTCAGCAAAAGAGCCAGGATCTC...CCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp AATCTTGGCTTTGGACAAAAGCAGGCAGAAACAAGACTCCTAGACAGGCGGGGCGTTTTCCCATTCCATTaGTGGGCAGTGCATGAAATA +
Preference number: 5 (lower is better)
Translates to: NLGFGQKQAETRLLDRRGVFPFH*WAVHEI
Trigger: TATTTCATGCACTGCCCACAAATGGAATGGGAAAAC...GCCCCGCCTGTCTAGGAGTCTTGTTTCTGCCTGCTTTTGTCCAAAGCCAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAACATCAGGGGCAGGCCTaGGGTAACGAGCTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQHQGQA*GNELLR
Trigger: ACGGAGGAGCTCGTTACCCAAGGCCTGCCCCTGATG...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp CTGTACAAATCAATGCCTGGAGGCCCTGAACTAGCATTAGACATTCACAGGGAAGAGGTCTGTTTCCGTTaGATTTCTGTGAGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LYKSMPGGPELALDIHREEVCFR*ISVSLG
Trigger: CCCCAAGCTCACAGAAATCAAACGGAAACAGACCTC...TTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TGTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGGAATTTGTCTGTGTTaGTGTAAAGCCAATGCGGCA +
Preference number: 5 (lower is better)
Translates to: CLCLCKANAAGELESSREGICLC*CKANAA
Trigger: TGCCGCATTGGCTTTACACAAACACAGACAAATTCC...TTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCATCAATTGGGGTTAACTaGGTTGTCCAGTTGCCCATT +
Preference number: 5 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPSIGVN*VVQLPI
Trigger: AATGGGCAACTGGACAACCAAGTTAACCCCAATTGA...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTTGTTCGCTCATGGTGTaGATCCCATCGGGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPCSLMV*IPSGPS
Trigger: GCTGGGGCCCGATGGGATCAACACCATGAGCGAACA...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp ATCCTCGAGACTAAAACCATCAGAGGAGTAGTCCAGGGAGACAAGAGAGTCACTCTGATCACTTCATTCTaGCTCGCTTTCAGGATCTCA +
Preference number: 5 (lower is better)
Translates to: ILETKTIRGVVQGDKRVTLITSF*LAFRIS
Trigger: TGAGATCCTGAAAGCGAGCAAGAATGAAGTGATCAG...AGTGACTCTCTTGTCTCCCTGGACTACTCCTCTGATGGTTTTAGTCTCGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTGAATGCAGGTGCCATCATTaGTCGGCTTGCTGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: FILTPKPRLACRLLSTIECRCHH*SACWRG
Trigger: TCCTCTCCAGCAAGCCGACAAATGATGGCACCTGCA...TTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp CTGTACAAATCAATGCCTGGAGGCCCTGAACTAGCATTAGACATTCACAGGGAAAACTTGGTTGTCCAGTaGCCCATTAAACTCTGGACC +
Preference number: 5 (lower is better)
Translates to: LYKSMPGGPELALDIHRENLVVQ*PIKLWT
Trigger: GGTCCAGAGTTTAATGGGCAACTGGACAACCAAGTT...TTCCCTGTGAATGTCTAATGCTAGTTCAGGGCCTCCAGGCATTGATTTGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GGGTGCTTTCAATTGGGGTTAACTTGGTTGTCCAGTTGCCCATTAAACTCTGGACACAGCCTCACCAATTaGCTACCATGGTTGACGTTT +
Preference number: 5 (lower is better)
Translates to: GCFQLGLTWLSSCPLNSGHSLTN*LPWLTF
Trigger: AAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG...TCCAGAGTTTAATGGGCAACTGGACAACCAAGTTAACCCCAATTGAAAGCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAAGTAGTGGGAGAGCCTTaGGAGACATCCGGACCGCAC +
Preference number: 5 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQVVGEP*ETSGPH
Trigger: GTGCGGTCCGGATGTCTCCAAAGGCTCTCCCACTAC...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS CCA 90 bp CTTTTCGCACAGATAATCTCACAGTGTCGCTGCAAAGCCTCCAGCTaGAAAAACTTAGCAGCAGACAGAAGCTCCATGATCTCATTGTTT +
Preference number: 5 (lower is better)
Translates to: LFAQIISQCRCKASS*KNLAADRSSMISLF
Trigger: AAACAATGAGATCATGGAGCTTCTGTCTGCTGCTAAGTTTTTCCAGCTGGAGGCTTTGCAGCGACACTGTGAGATTATCTGTGCGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000494235.2
CDS-3UTR CAA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTATCTCCGAGTCGTTGTaGACCGTGTGCTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPISESL*TVCSRV
Trigger: GACCCTGGAGCACACGGTCAACAACGACTCGGAGAT...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTACCTGGAGGTTGACTTaGGAAGGCTCCACGTTGGGG +
Preference number: 5 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPTWRLT*EGSTLG
Trigger: CCCCAACGTGGAGCCTTCCAAAGTCAACCTCCAGGT...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAAGGCTGGGCGAGCAGTTaGCGGAACACATTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQGWASS*RNTFLC
Trigger: ACACAGGAATGTGTTCCGCAAACTGCTCGCCCAGCC...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp ACGTCATCTAGGATATTTCCTGATGATATCACTATTAACGCCTCAGCTGTAGCCGAGGTCTGTTTCCGTTaGATTTCTGTGAGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: TSSRIFPDDITINASAVAEVCFR*ISVSLG
Trigger: CCCCAAGCTCACAGAAATCAAACGGAAACAGACCTC...GGCTACAGCTGAGGCGTTAATAGTGATATCATCAGGAAATATCCTAGATGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTGAACTGGAGAGGAGTGCTTaGAACCTTGGAGAGGCTGTA +
Preference number: 5 (lower is better)
Translates to: FILTPKPRLACRLLSTIELERSA*NLGEAV
Trigger: TACAGCCTCTCCAAGGTTCAAAGCACTCCTCTCCAG...TTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GGGAGGTTTGCAAATGATCATGTGGAAGAGAGGCCTTGTGTATCAGCCTCGCAGATTATTTCCTCATTATaGGTCACAGCCTCACCAATT +
Preference number: 5 (lower is better)
Translates to: GRFANDHVEERPCVSASQIISSL*VTASPI
Trigger: AATTGGTGAGGCTGTGACCAATAATGAGGAAATAAT...CTGCGAGGCTGATACACAAGGCCTCTCTTCCACATGATCATTTGCAAACCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GTCTGTGTTTGTGTAAAGCCAATGCGGCAGGAGAACTGGAAAGTTCCCGGGAAGCGATTAGCATGCAGGTaGCTTTCAACTATTGAATTA +
Preference number: 5 (lower is better)
Translates to: VCVCVKPMRQENWKVPGKRLACR*LSTIEL
Trigger: TAATTCAATAGTTGAAAGCAACCTGCATGCTAATCG...CTTCCCGGGAACTTTCCAGTTCTCCTGCCGCATTGGCTTTACACAAACACAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp ATGAAGCGATGTGACATTGGTCCTCTGAACAATGGTTCAGGGAGCTCGTACAACATAACAGAAGCCTCATaGGGAGTTACCACTGTACAA +
Preference number: 5 (lower is better)
Translates to: MKRCDIGPLNNGSGSSYNITEAS*GVTTVQ
Trigger: TTGTACAGTGGTAACTCCCAATGAGGCTTCTGTTAT...GTTGTACGAGCTCCCTGAACCATTGTTCAGAGGACCAATGTCACATCGCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTGTTTTCCCATTCCATTaGTGGGCAGTGCATGAAATA +
Preference number: 5 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSVFPFH*WAVHEI
Trigger: TATTTCATGCACTGCCCACAAATGGAATGGGAAAAC...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACGGCTGGGCGAGCAGTTaGCGGAACACATTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: NNPVLYTLRIQKESILSYGWASS*RNTFLC
Trigger: ACACAGGAATGTGTTCCGCAAACTGCTCGCCCAGCC...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACTGCAGGTGCCATCATTaGTCGGCTTGCTGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNCRCHH*SACWRG
Trigger: TCCTCTCCAGCAAGCCGACAAATGATGGCACCTGCA...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp AACAATGGTTCAGGGAGCTCGTACAACAGAAGAACAGTGGGTCCTTCACAATCTTCATACAGGAGCTGCTaGAATGCTTCGTTTTCAATG +
Preference number: 5 (lower is better)
Translates to: NNGSGSSYNRRTVGPSQSSYRSC*NASFSM
Trigger: CATTGAAAACGAAGCATTCAAGCAGCTCCTGTATGA...AGATTGTGAAGGACCCACTGTTCTTCTGTTGTACGAGCTCCCTGAACCATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp CACAGCCTCACCAATTTGCTACCATGGTTGACGTTTGCTGAAGCACAGCTACCACGATTAGCATGCAGGTaGCTTTCAACTATTGAATTA +
Preference number: 5 (lower is better)
Translates to: HSLTNLLPWLTFAEAQLPRLACR*LSTIEL
Trigger: TAATTCAATAGTTGAAAGCAACCTGCATGCTAATCG...TGGTAGCTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATTGGTGAGGCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GGGTGCTTTCAATTGGGGTTAACTTGGTTGTCCAGTTGCCCATTAAACTCTGGAGTTTATCAACAAAACTaGGCTGTCCCCAAGGGTAAA +
Preference number: 5 (lower is better)
Translates to: GCFQLGLTWLSSCPLNSGVYQQN*AVPKGK
Trigger: TTTACCCTTGGGGACAGCCAAGTTTTGTTGATAAAC...TCCAGAGTTTAATGGGCAACTGGACAACCAAGTTAACCCCAATTGAAAGCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS TCA 90 bp CAATGGATCCCTTACCTCCATGATCTCATTGTTTTTAATGAGCAGTaGCTCTGGGCCACCATAGTAGAGATACTGCATAACCAGCTGAAA +
Preference number: 5 (lower is better)
Translates to: QWIPYLHDLIVFNEQ*LWATIVEILHNQLK
Trigger: TTTCAGCTGGTTATGCAGTATCTCTACTATGGTGGCCCAGAGTCACTGCTCATTAAAAACAATGAGATCATGGAGGTAAGGGATCCATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTGGAGAGGAGTGCTTaGAACCTTGGAGAGGCTGTA +
Preference number: 5 (lower is better)
Translates to: LAVHLFCVIMITKARLFQLERSA*NLGEAV
Trigger: TACAGCCTCTCCAAGGTTCAAAGCACTCCTCTCCAG...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTTGTGGAAGAGAGGCCTaGTGTATCAGCCTCGCAGAA +
Preference number: 5 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPCGREA*CISLAE
Trigger: TTCTGCGAGGCTGATACACAAGGCCTCTCTTCCACA...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GAATACTGTGGCACTTTACCAATCTCTTTTGCTTATAATATATGGCAGAGCCAATTGGAAGGCTCCACGTaGGGGTTTTCCCATTCCATT +
Preference number: 5 (lower is better)
Translates to: EYCGTLPISFAYNIWQSQLEGST*GFSHSI
Trigger: AATGGAATGGGAAAACCCCAACGTGGAGCCTTCCAA...TTGGCTCTGCCATATATTATAAGCAAAAGAGATTGGTAAAGTGCCACAGTATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280758.10
CDS-3UTR CAA 90 bp TGTTTAGAATATCAGCAGTATCTTATCAGATGCATGTTTACACAGTGTGGACCTGAGGTCTGTTTCCGTTaGATTTCTGTGAGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: CLEYQQYLIRCMFTQCGPEVCFR*ISVSLG
Trigger: CCCCAAGCTCACAGAAATCAAACGGAAACAGACCTC...AGGTCCACACTGTGTAAACATGCATCTGATAAGATACTGCTGATATTCTAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTGAATTGGGGTTAACTTGGTaGTCCAGTTGCCCATTAAAC +
Preference number: 5 (lower is better)
Translates to: FILTPKPRLACRLLSTIELGLTW*SSCPLN
Trigger: GTTTAATGGGCAACTGGACAACCAAGTTAACCCCAA...TTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTGAAAATTTGCTACCATGGTaGACGTTTGCTGAAGCACAG +
Preference number: 5 (lower is better)
Translates to: FILTPKPRLACRLLSTIENLLPW*TFAEAQ
Trigger: CTGTGCTTCAGCAAACGTCAACCATGGTAGCAAATT...TTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TTTATTCTCACCCCGAAACCACGATTAGCATGCAGGTTGCTTTCAACTATTGAAACACAGTTGTCGGTATaGATGCTTTTCGCACAGATA +
Preference number: 5 (lower is better)
Translates to: FILTPKPRLACRLLSTIETQLSV*MLFAQI
Trigger: TATCTGTGCGAAAAGCATCAATACCGACAACTGTGT...TTCAATAGTTGAAAGCAACCTGCATGCTAATCGTGGTTTCGGGGTGAGAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAAGGAATTTGTCTGTGTTaGTGTAAAGCCAATGCGGCA +
Preference number: 5 (lower is better)
Translates to: LAVHLFCVIMITKARLFQGICLC*CKANAA
Trigger: TGCCGCATTGGCTTTACACAAACACAGACAAATTCC...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAACTTTTGGGGTTAACTTGGTaGTCCAGTTGCCCATTAAAC +
Preference number: 5 (lower is better)
Translates to: AVHLFCVIMITKARLFQLLGLTW*SSCPLN
Trigger: GTTTAATGGGCAACTGGACAACCAAGTTAACCCCAA...AAGTTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACCTGATCACTTCATTCTaGCTCGCTTTCAGGATCTCA +
Preference number: 5 (lower is better)
Translates to: NNPVLYTLRIQKESILSYLITSF*LAFRIS
Trigger: TGAGATCCTGAAAGCGAGCAAGAATGAAGTGATCAG...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp AATAATCCTGTACTGTACACTCTCAGAATACAGAAAGAATCCATCCTATCATACCCAGTGGAAAGTCCTTaGTTTTTCAACAGGAACACG +
Preference number: 5 (lower is better)
Translates to: NNPVLYTLRIQKESILSYPVESP*FFNRNT
Trigger: CGTGTTCCTGTTGAAAAACAAAGGACTTTCCACTGG...GTATGATAGGATGGATTCTTTCTGTATTCTGAGAGTGTACAGTACAGGATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAAGTTTATCAACAAAACTaGGCTGTCCCCAAGGGTAAA +
Preference number: 5 (lower is better)
Translates to: LAVHLFCVIMITKARLFQVYQQN*AVPKGK
Trigger: TTTACCCTTGGGGACAGCCAAGTTTTGTTGATAAAC...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS-3UTR CAA 90 bp GATAGTTATCCCCATTTTATGGGTAAGGAAGCTGAGGATATGAGGTTAAATAACCTCAGCTTCTATATCTaGGAAGAACAGACAGTGTTG +
Preference number: 5 (lower is better)
Translates to: DSYPHFMGKEAEDMRLNNLSFYI*EEQTVL
Trigger: CAACACTGTCTGTTCTTCCAAGATATAGAAGCTGAG...GTTATTTAACCTCATATCCTCAGCTTCCTTACCCATAAAATGGGGATAACTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS-3UTR CAA 90 bp TTGGCAGTGCACCTCTTTTGTGTAATCATGATCACTAAGGCAAGATTATTTCAAATTATTTCCTCATTATaGGTCACAGCCTCACCAATT +
Preference number: 5 (lower is better)
Translates to: LAVHLFCVIMITKARLFQIISSL*VTASPI
Trigger: AATTGGTGAGGCTGTGACCAATAATGAGGAAATAAT...TTGAAATAATCTTGCCTTAGTGATCATGATTACACAAAAGAGGTGCACTGCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS CCA 72 bp GCTGGCTCCCGGCTCCCGGCTCCCAGTTCCCGGCCCTaGTTCGCTCGGCGCCAGCCTGCCCTGCACCGGAGC +
Preference number: 6 (lower is better)
Translates to: AGSRLPAPSSRP*FARRQPALHRS
Trigger: GCTCCGGTGCAGGGCAGGCTGGCGCCGAGCGAACCAGGGCCGGGAACTGGGAGCCGGGAGCCGGGAGCCAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS GCA 72 bp CCGCCTGGCGGACGTCGTCGCTGTCCATGGAGAAGCTaGGGCGGTGGCCGGCGTGCGCCACGGCCACCCGGA +
Preference number: 6 (lower is better)
Translates to: PPGGRRRCPWRS*GGGRRAPRPPG
Trigger: TCCGGGTGGCCGTGGCGCACGCCGGCCACCGCCGCAGCTTCTCCATGGACAGCGACGACGTCCGCCAGGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS CCA 72 bp TGCGCACCAGCGCCCGGCTCACCAGCGTCGACAGCTTaGCCAGCGCGTCCTTGGGCAGGCCGCCGGGGACCG +
Preference number: 6 (lower is better)
Translates to: CAPAPGSPASTA*PARPWAGRRGP
Trigger: CGGTCCCCGGCGGCCTGCCCAAGGACGCGCTGGCCAAGCTGTCGACGCTGGTGAGCCGGGCGCTGGTGCGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS TCA 72 bp GTAGCCACCGGGCGCCGGCCACGGTGTTCGTGGGACTaGGACCACCCCAGATGCCGCCGCCGCCGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: VATGRRPRCSWD*DHPRCRRRRSS
Trigger: GGAGCTGCGGCGGCGGCGGCATCTGGGGTGGTCTCAGTCCCACGAACACCGTGGCCGGCGCCCGGTGGCTAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS CAA 72 bp ATGCGCACCAGCGCCCGGCTCACCAGCGTCGACAGCTaGGCCAGCGCGTCCTTGGGCAGGCCGCCGGGGACC +
Preference number: 6 (lower is better)
Translates to: MRTSARLTSVDS*ASASLGRPPGT
Trigger: GGTCCCCGGCGGCCTGCCCAAGGACGCGCTGGCCAAGCTGTCGACGCTGGTGAGCCGGGCGCTGGTGCGCAT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp CCGACTTGCCGCGGCCCAGGCGGTCGCCGCCGGCGCTaGTCATGTTGTAGAGGGACAGTGCGGCCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: PTCRGPGGRRRR*SCCRGTVRPAQ
Trigger: CTGCGCTGGCCGCACTGTCCCTCTACAACATGAGCAGCGCCGGCGGCGACCGCCTGGGCCGCGGCAAGTCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp GGGACCTCGTCTAGGTCCGGCAGCAGCCGCGAGCAGTaGTGGCCGGCGCAGTCCAGCCCCTCGGAGTCTTCC +
Preference number: 6 (lower is better)
Translates to: GTSSRSGSSREQ*WPAQSSPSESS
Trigger: GGAAGACTCCGAGGGGCTGGACTGCGCCGGCCAGCACTGCTCGCGGCTGCTGCCGGACCTAGACGAGGTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp GTCGCCGCCGGCGCTGCTCATGTTGTAGAGGGACAGTaGGGCCAGCGCAGCCGCCGTACAGTGCGCGGCCAG +
Preference number: 6 (lower is better)
Translates to: VAAGAAHVVEGQ*GQRSRRTVRGQ
Trigger: CTGGCCGCGCACTGTACGGCGGCTGCGCTGGCCGCACTGTCCCTCTACAACATGAGCAGCGCCGGCGGCGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS CCA 72 bp ACCTCGTCTAGGTCCGGCAGCAGCCGCGAGCAGTGCTaGCCGGCGCAGTCCAGCCCCTCGGAGTCTTCCACC +
Preference number: 6 (lower is better)
Translates to: TSSRSGSSREQC*PAQSSPSESST
Trigger: GGTGGAAGACTCCGAGGGGCTGGACTGCGCCGGCCAGCACTGCTCGCGGCTGCTGCCGGACCTAGACGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS TCA 72 bp GTGAACTTGGGCGCCTCGTGGAGCGCATGGTGGTGGTaGTGGTGGTGGTTGGCGGCGGCTGCCGGCGGGACT +
Preference number: 6 (lower is better)
Translates to: VNLGASWSAWWW*WWWLAAAAGGT
Trigger: AGTCCCGCCGGCAGCCGCCGCCAACCACCACCATCACCACCACCATGCGCTCCACGAGGCGCCCAAGTTCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS GCA 72 bp CGAAGCGCAGGCTCAGGCGCTGCGCCTCTTTGGCTATaGGCACCAGCGCCCGGCTCACCAGCGTCGACAGCT +
Preference number: 6 (lower is better)
Translates to: RSAGSGAAPLWL*APAPGSPASTA
Trigger: AGCTGTCGACGCTGGTGAGCCGGGCGCTGGTGCGCATAGCCAAAGAGGCGCAGCGCCTGAGCCTGCGCTTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS CCA 72 bp GACCCTGGAGTCATCTTCCAGAGTCCGGGCCGGAGCTaGGCGCAATGGGGAGCGAGCCAGGCCGGGAAGGAA +
Preference number: 6 (lower is better)
Translates to: DPGVIFQSPGRS*AQWGASQAGKE
Trigger: TTCCTTCCCGGCCTGGCTCGCTCCCCATTGCGCCCAGCTCCGGCCCGGACTCTGGAAGATGACTCCAGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS TCA 72 bp GTGGGAGAGCCTTTGGAGACATCCGGACCGCACCGGTaGCCCCGGGGCAGGCTCTCTGGAATCCTTGGGCCT +
Preference number: 6 (lower is better)
Translates to: VGEPLETSGPHR*PRGRLSGILGP
Trigger: AGGCCCAAGGATTCCAGAGAGCCTGCCCCGGGGTCACCGGTGCGGTCCGGATGTCTCCAAAGGCTCTCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS GCA 72 bp GGCGGCCAGCAGCTCCCGCCATACGGGGACGCCGGGTaGGAGTCGGAACAGCACAAAGACAAGTTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: GGQQLPPYGDAG*ESEQHKDKLEE
Trigger: CTCCTCCAACTTGTCTTTGTGCTGTTCCGACTCGCACCCGGCGTCCCCGTATGGCGGGAGCTGCTGGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp CTTACCTCTCCTGGCCATCGCTGCGCCACTTCATGCTaGAGCCGCCTGGGAGCCAAAGGGAAGGAGCGGCGA +
Preference number: 6 (lower is better)
Translates to: LTSPGHRCATSC*SRLGAKGKERR
Trigger: TCGCCGCTCCTTCCCTTTGGCTCCCAGGCGGCTGCAGCATGAAGTGGCGCAGCGATGGCCAGGAGAGGTAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS TCA 72 bp CCATTGCCGTGGTGCTTGGCATTGAGGGGCTGCAGGTaGTGCATTGCACGGGACACCAGGTCACCGCTGGCG +
Preference number: 6 (lower is better)
Translates to: PLPWCLALRGCR*CIARDTRSPLA
Trigger: CGCCAGCGGTGACCTGGTGTCCCGTGCAATGCATCACCTGCAGCCCCTCAATGCCAAGCACCACGGCAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550706.5
CDS GCA 72 bp CGACCCGCGAGTAGATGTCCCGGAAGAGGCTCTCCATaGAGGCTGTCAGGTAGATGGCGGCGTGCTCGTGGA +
Preference number: 6 (lower is better)
Translates to: RPASRCPGRGSP*RLSGRWRRARG
Trigger: TCCACGAGCACGCCGCCATCTACCTGACAGCCTGCATGGAGAGCCTCTTCCGGGACATCTACTCGCGGGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp TGCTGGAAGGCGATCCGCAAAGACTCCAGCCACGTGTaGAGAGTCCACGGGACGCCTACAGCAGCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: CWKAIRKDSSHV*RVHGTPTAAAS
Trigger: GCTGGCAGCTGCTGTAGGCGTCCCGTGGACTCTGCACACGTGGCTGGAGTCTTTGCGGATCGCCTTCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420571.6
CDS CCA 72 bp CGGAACTGCCGCCGCTGGAATATACAGAGCAGACCCTaGAGTCATCTTCCAGAGTCCGGGCCGGAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: RNCRRWNIQSRP*SHLPESGPELG
Trigger: GCCCAGCTCCGGCCCGGACTCTGGAAGATGACTCCAGGGTCTGCTCTGTATATTCCAGCGGCGGCAGTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS CCA 72 bp ACGCCGGGTGCGAGTCGGAACAGCACAAAGACAAGTTaGAGGAGCGCACCGAGTCCGCCGCGCCACCATAAC +
Preference number: 6 (lower is better)
Translates to: TPGASRNSTKTS*RSAPSPPRHHN
Trigger: GTTATGGTGGCGCGGCGGACTCGGTGCGCTCCTCCAACTTGTCTTTGTGCTGTTCCGACTCGCACCCGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS CCA 72 bp GCCAGGCCCCAGGACAGCACGATCTCCATGGCGCTCTaGATCTCGTACTTGGTGCACTTGGCGAAGCGCAGG +
Preference number: 6 (lower is better)
Translates to: ARPQDSTISMAL*ISYLVHLAKRR
Trigger: CCTGCGCTTCGCCAAGTGCACCAAGTACGAGATCCAGAGCGCCATGGAGATCGTGCTGTCCTGGGGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS CCA 72 bp AGTGCGCGGCCAGGCCCCAGGACAGCACGATCTCCATaGCGCTCTGGATCTCGTACTTGGTGCACTTGGCGA +
Preference number: 6 (lower is better)
Translates to: SARPGPRTARSP*RSGSRTWCTWR
Trigger: TCGCCAAGTGCACCAAGTACGAGATCCAGAGCGCCATGGAGATCGTGCTGTCCTGGGGCCTGGCCGCGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS CAA 90 bp TGGCCGGCGCAGTCCAGCCCCTCGGAGTCTTCCACCAGGGCAGTGTaGACAGTGTCAAAGCTGTTGTGCCGGCTGTGCATGGAGTCAGCT +
Preference number: 6 (lower is better)
Translates to: WPAQSSPSESSTRAV*TVSKLLCRLCMESA
Trigger: AGCTGACTCCATGCACAGCCGGCACAACAGCTTTGACACTGTCAACACTGCCCTGGTGGAAGACTCCGAGGGGCTGGACTGCGCCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp AGGAGACCCCAGATCTCCGAGTCGTTGTTGACCGTGTaGTCCAGGGTCTCCACGGTGAACTTGGGCGCCTCG +
Preference number: 6 (lower is better)
Translates to: RRPQISESLLTV*SRVSTVNLGAS
Trigger: CGAGGCGCCCAAGTTCACCGTGGAGACCCTGGAGCACACGGTCAACAACGACTCGGAGATCTGGGGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS GCA 72 bp TCGGCGATGCTGCCTACGCGCGTGGCCAGCAAAGACTaGTCGATGGTCCTCAGCTCCGACTGGCTGAACATG +
Preference number: 6 (lower is better)
Translates to: SAMLPTRVASKD*SMVLSSDWLNM
Trigger: CATGTTCAGCCAGTCGGAGCTGAGGACCATCGAGCAGTCTTTGCTGGCCACGCGCGTAGGCAGCATCGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp CTTGGCTTCGATGGCCACCGCATCCAGCTTTCGAGATaGACAAAAGCAGTCGTCGGCCCTGAGCTGGCGCGG +
Preference number: 6 (lower is better)
Translates to: LGFDGHRIQLSR*TKAVVGPELAR
Trigger: CCGCGCCAGCTCAGGGCCGACGACTGCTTTTGTGCATCTCGAAAGCTGGATGCGGTGGCCATCGAAGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS GCA 72 bp GTGGTGCTTGGCATTGAGGGGCTGCAGGTGATGCATTaGACGGGACACCAGGTCACCGCTGGCGTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: VVLGIEGLQVMH*TGHQVTAGVLP
Trigger: GGGAAGAACGCCAGCGGTGACCTGGTGTCCCGTGCAATGCATCACCTGCAGCCCCTCAATGCCAAGCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550706.5
CDS CCA 72 bp CCAGGTCACTCAATTCGGCGATGCTGCCTACGCGCGTaGCCAGCAAAGACTGCTCGATGGTCCTCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: PGHSIRRCCLRA*PAKTARWSSAP
Trigger: CGGAGCTGAGGACCATCGAGCAGTCTTTGCTGGCCACGCGCGTAGGCAGCATCGCCGAATTGAGTGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS CAA 90 bp CCCTCGGAGTCTTCCACCAGGGCAGTGTTGACAGTGTCAAAGCTGTaGTGCCGGCTGTGCATGGAGTCAGCTAGAGGCGGCCAGCAGCTC +
Preference number: 6 (lower is better)
Translates to: PSESSTRAVLTVSKL*CRLCMESARGGQQL
Trigger: GAGCTGCTGGCCGCCTCTAGCTGACTCCATGCACAGCCGGCACAACAGCTTTGACACTGTCAACACTGCCCTGGTGGAAGACTCCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS TCA 72 bp GGGTGTTTCCGAGTAGTTCTCCTCGCCATGCTCCACTaGGCCTTCCACCTTGGCCCCAGCATCCAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: GCFRVVLLAMLH*AFHLGPSIQEE
Trigger: CTCCTCCTGGATGCTGGGGCCAAGGTGGAAGGCTCAGTGGAGCATGGCGAGGAGAACTACTCGGAAACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp GTCCGCGCCGCCTTGGCTCACTTTTCCACTAGCCGCTaGTACCAACTGTTAGTACTTTCGGCTGCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: VRAALAHFSTSR*YQLLVLSAASR
Trigger: CCGGGAGGCAGCCGAAAGTACTAACAGTTGGTAGCAGCGGCTAGTGGAAAAGTGAGCCAAGGCGGCGCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS GCA 72 bp GCAGTGTTGACAGTGTCAAAGCTGTTGTGCCGGCTGTaGATGGAGTCAGCTAGAGGCGGCCAGCAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: AVLTVSKLLCRL*MESARGGQQLP
Trigger: CGGGAGCTGCTGGCCGCCTCTAGCTGACTCCATGCACAGCCGGCACAACAGCTTTGACACTGTCAACACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp TTGCACGGGACACCAGGTCACTCAATTCGGCGATGCTaGCTACGCGCGTGGCCAGCAAAGACTGCTCGATGG +
Preference number: 6 (lower is better)
Translates to: LHGTPGHSIRRC*LRAWPAKTARW
Trigger: CCATCGAGCAGTCTTTGCTGGCCACGCGCGTAGGCAGCATCGCCGAATTGAGTGACCTGGTGTCCCGTGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp GCATTGCACGGGACACCAGGTCACTCAATTCGGCGATaGTGCCTACGCGCGTGGCCAGCAAAGACTGCTCGA +
Preference number: 6 (lower is better)
Translates to: ALHGTPGHSIRR*CLRAWPAKTAR
Trigger: TCGAGCAGTCTTTGCTGGCCACGCGCGTAGGCAGCATCGCCGAATTGAGTGACCTGGTGTCCCGTGCAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS TCA 72 bp AGTCCAGCCCCTCGGAGTCTTCCACCAGGGCAGTGTTaGCAGTGTCAAAGCTGTTGTGCCGGCTGTGCATGG +
Preference number: 6 (lower is better)
Translates to: SPAPRSLPPGQC*QCQSCCAGCAW
Trigger: CCATGCACAGCCGGCACAACAGCTTTGACACTGTCAACACTGCCCTGGTGGAAGACTCCGAGGGGCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp TCCACCAGGGCAGTGTTGACAGTGTCAAAGCTGTTGTaGCGGCTGTGCATGGAGTCAGCTAGAGGCGGCCAG +
Preference number: 6 (lower is better)
Translates to: STRAVLTVSKLL*RLCMESARGGQ
Trigger: CTGGCCGCCTCTAGCTGACTCCATGCACAGCCGGCACAACAGCTTTGACACTGTCAACACTGCCCTGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS CAA 72 bp GGCGGCAGCACGAGGAAGGGCCTTTCCACCTGGAGGTaGACTTTGGAAGGCTCCACGTTGGGGTTTTCCCAT +
Preference number: 6 (lower is better)
Translates to: GGSTRKGLSTWR*TLEGSTLGFSH
Trigger: ATGGGAAAACCCCAACGTGGAGCCTTCCAAAGTCAACCTCCAGGTGGAAAGGCCCTTCCTCGTGCTGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS CAA 72 bp TACATCAGGGGAGTCATGCCCTGTTCGCTCATGGTGTaGATCCCATCGGGCCCCAGCAGAGACACTGCCTGC +
Preference number: 6 (lower is better)
Translates to: YIRGVMPCSLMV*IPSGPSRDTAC
Trigger: GCAGGCAGTGTCTCTGCTGGGGCCCGATGGGATCAACACCATGAGCGAACAGGGCATGACTCCCCTGATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
CDS TCA 72 bp AGTTCCCCTGGCTTGTTTGACCGCTGTGGGTCTCTGTaGAGATTCAGGCTGTCTGGTAGGCACAGCACCCCG +
Preference number: 6 (lower is better)
Translates to: SSPGLFDRCGSL*RFRLSGRHSTP
Trigger: CGGGGTGCTGTGCCTACCAGACAGCCTGAATCTTCACAGAGACCCACAGCGGTCAAACAAGCCAGGGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS TCA 72 bp GCAAAGACTGCTCGATGGTCCTCAGCTCCGACTGGCTaGACATGGGCAGTTCCCCTGGCTTGTTTGACCGCT +
Preference number: 6 (lower is better)
Translates to: AKTARWSSAPTG*TWAVPLACLTA
Trigger: AGCGGTCAAACAAGCCAGGGGAACTGCCCATGTTCAGCCAGTCGGAGCTGAGGACCATCGAGCAGTCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS TCA 72 bp CCATTGCCGTGGTGCTTGGCATTGAGGGGCTGCAGGTaGTGCATTGCACGGGACACCAGGTCACTCAATTCG +
Preference number: 6 (lower is better)
Translates to: PLPWCLALRGCR*CIARDTRSLNS
Trigger: CGAATTGAGTGACCTGGTGTCCCGTGCAATGCATCACCTGCAGCCCCTCAATGCCAAGCACCACGGCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS TCA 72 bp GCGGCAGCACGAGGAAGGGCCTTTCCACCTGGAGGTTaGCTTTGGAAGGCTCCACGTTGGGGTTTTCCCATT +
Preference number: 6 (lower is better)
Translates to: AAARGRAFPPGG*LWKAPRWGFPI
Trigger: AATGGGAAAACCCCAACGTGGAGCCTTCCAAAGTCAACCTCCAGGTGGAAAGGCCCTTCCTCGTGCTGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS GCA 72 bp GTGGTGCTTGGCATTGAGGGGCTGCAGGTGATGCATTaGACGGGACACCAGGTCACTCAATTCGGCGATGCT +
Preference number: 6 (lower is better)
Translates to: VVLGIEGLQVMH*TGHQVTQFGDA
Trigger: AGCATCGCCGAATTGAGTGACCTGGTGTCCCGTGCAATGCATCACCTGCAGCCCCTCAATGCCAAGCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp GTGTTGATCCCATCGGGCCCCAGCAGAGACACTGCCTaGTTCACCAGGTCTGTTCGTCCACAGTTCAGCATC +
Preference number: 6 (lower is better)
Translates to: VLIPSGPSRDTA*FTRSVRPQFSI
Trigger: GATGCTGAACTGTGGACGAACAGACCTGGTGAAGCAGGCAGTGTCTCTGCTGGGGCCCGATGGGATCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp CATGGTGTTGATCCCATCGGGCCCCAGCAGAGACACTaGCTGCTTCACCAGGTCTGTTCGTCCACAGTTCAG +
Preference number: 6 (lower is better)
Translates to: HGVDPIGPQQRH*LLHQVCSSTVQ
Trigger: CTGAACTGTGGACGAACAGACCTGGTGAAGCAGGCAGTGTCTCTGCTGGGGCCCGATGGGATCAACACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp TGCTGGAAGGCGATCCGCAAAGACTCCAGCCACGTGTaGAGAGTCCACGGGACGCCTATGCTCCTGATATCA +
Preference number: 6 (lower is better)
Translates to: CWKAIRKDSSHV*RVHGTPMLLIS
Trigger: TGATATCAGGAGCATAGGCGTCCCGTGGACTCTGCACACGTGGCTGGAGTCTTTGCGGATCGCCTTCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000490090.6
CDS GCA 72 bp TCCTTTAACAAGCACTGGATGAGAGGCCTGCGGTGCTaGTGGAAGGCGATCCGCAAAGACTCCAGCCACGTG +
Preference number: 6 (lower is better)
Translates to: SFNKHWMRGLRC*WKAIRKDSSHV
Trigger: CACGTGGCTGGAGTCTTTGCGGATCGCCTTCCAGCAGCACCGCAGGCCTCTCATCCAGTGCTTGTTAAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
CDS CCA 72 bp GCCAGCAAAGACTGCTCGATGGTCCTCAGCTCCGACTaGCTGAACATGGGCAGTTCCCCTGGCTTGTTTGAC +
Preference number: 6 (lower is better)
Translates to: ASKDCSMVLSSD*LNMGSSPGLFD
Trigger: GTCAAACAAGCCAGGGGAACTGCCCATGTTCAGCCAGTCGGAGCTGAGGACCATCGAGCAGTCTTTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
CDS CAA 72 bp TCTTCCACCAGGGCAGTGTTGACAGTGTCAAAGCTGTaGTGCCGGCTGTGCATGGAGTCAGCTAGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: SSTRAVLTVSKL*CRLCMESARGG
Trigger: GCCGCCTCTAGCTGACTCCATGCACAGCCGGCACAACAGCTTTGACACTGTCAACACTGCCCTGGTGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000420571.6
ENST00000490090.6
CDS TCA 72 bp AGTTCCCCTGGCTTGTTTGACCGCTGTGGGTCTCTGTaGAGATTCAGGCTGTCTGGTAGGCACAGCACCCCT +
Preference number: 6 (lower is better)
Translates to: SSPGLFDRCGSL*RFRLSGRHSTP
Trigger: AGGGGTGCTGTGCCTACCAGACAGCCTGAATCTTCACAGAGACCCACAGCGGTCAAACAAGCCAGGGGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415943.6
CDS GCA 72 bp AACTCCTTTAACAAGCACTGGATGAGAGGCCTGCGGTaGTGCTGGAAGGCGATCCGCAAAGACTCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: NSFNKHWMRGLR*CWKAIRKDSSH
Trigger: GTGGCTGGAGTCTTTGCGGATCGCCTTCCAGCAGCACCGCAGGCCTCTCATCCAGTGCTTGTTAAAGGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
CDS CAA 72 bp GCTCGCTTTCAGGATCTCAAACATCAGGGGCAGGCCTaGGGTAACGAGCTCCTCCGTGTATTCCTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: ARFQDLKHQGQA*GNELLRVFLLL
Trigger: CAGGAGGAGGAATACACGGAGGAGCTCGTTACCCAAGGCCTGCCCCTGATGTTTGAGATCCTGAAAGCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
CDS GCA 72 bp TACCAACTGTTAGTACTTTCGGCTGCCTCCCGGAACTaGCGCCGCTGGAATATACAGAGCAGACCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: YQLLVLSAASRN*RRWNIQSRPWS
Trigger: ACTCCAGGGTCTGCTCTGTATATTCCAGCGGCGGCAGTTCCGGGAGGCAGCCGAAAGTACTAACAGTTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS CCA 72 bp TTAGTACTTTCGGCTGCCTCCCGGAACTGCCGCCGCTaGAATATACAGAGCAGACCCTGGAGTCATCTTCCA +
Preference number: 6 (lower is better)
Translates to: LVLSAASRNCRR*NIQSRPWSHLP
Trigger: TGGAAGATGACTCCAGGGTCTGCTCTGTATATTCCAGCGGCGGCAGTTCCGGGAGGCAGCCGAAAGTACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000420571.6
CDS CCA 72 bp TCCAGGGACAGGATATCACTCTTCTCCTTCTCTGGCTaGGCGAGCAGTTTGCGGAACACATTCCTGTGTCCG +
Preference number: 6 (lower is better)
Translates to: SRDRISLFSFSG*ASSLRNTFLCP
Trigger: CGGACACAGGAATGTGTTCCGCAAACTGCTCGCCCAGCCAGAGAAGGAGAAGAGTGATATCCTGTCCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000490090.6
CDS CCA 72 bp CTCCTCCAGGGACAGGATATCACTCTTCTCCTTCTCTaGCTGGGCGAGCAGTTTGCGGAACACATTCCTGTG +
Preference number: 6 (lower is better)
Translates to: LLQGQDITLLLL*LGEQFAEHIPV
Trigger: CACAGGAATGTGTTCCGCAAACTGCTCGCCCAGCCAGAGAAGGAGAAGAGTGATATCCTGTCCCTGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000490090.6
CDS CAA 72 bp CCTCTCGGCGATCATGTGAACATAAGGATGAGTCACTaGAAGCACCAAGCGCAGGGTCTGGAGCGGCGGAAA +
Preference number: 6 (lower is better)
Translates to: PLGDHVNIRMSH*KHQAQGLERRK
Trigger: TTTCCGCCGCTCCAGACCCTGCGCTTGGTGCTTCAAGTGACTCATCCTTATGTTCACATGATCGCCGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS GCA 72 bp GGCAGGAGAACTGGAAAGTTCCCGGGAAGCATTCCCTaGACTAGGCGTTTCATACCACGGAACCTTTGGAAG +
Preference number: 6 (lower is better)
Translates to: GRRTGKFPGSIP*TRRFIPRNLWK
Trigger: CTTCCAAAGGTTCCGTGGTATGAAACGCCTAGTGCAGGGAATGCTTCCCGGGAACTTTCCAGTTCTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280758.10
ENST00000357167.8
CDS GCA 72 bp ACTTCCATGCAGGCTGGTGACCCGAGTTTACAGAAGTaGCACTCACCCAAGGGACCTATGATAGCCAACACC +
Preference number: 6 (lower is better)
Translates to: TSMQAGDPSLQK*HSPKGPMIANT
Trigger: GGTGTTGGCTATCATAGGTCCCTTGGGTGAGTGGCACTTCTGTAAACTCGGGTCACCAGCCTGCATGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490090.6
CDS CCA 72 bp CAGAGCCGTCCAATGGCGGGTCTCGGGGTGGACGGATaGATATTTATGAGGAGTACTGACAACCTCCACATT +
Preference number: 6 (lower is better)
Translates to: QSRPMAGLGVDG*IFMRSTDNLHI
Trigger: AATGTGGAGGTTGTCAGTACTCCTCATAAATATCCATCCGTCCACCCCGAGACCCGCCATTGGACGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
CDS CCA 72 bp ATGGCCAACGTCCTCTGTAAGTCCTGGAGCACATCCTaGCCGGTCCCTTCACCATTTTTGTCATACAGGAGC +
Preference number: 6 (lower is better)
Translates to: MANVLCKSWSTS*PVPSPFLSYRS
Trigger: GCTCCTGTATGACAAAAATGGTGAAGGGACCGGCCAGGATGTGCTCCAGGACTTACAGAGGACGTTGGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000494235.2
CDS CAA 72 bp AGCACGAGGAAGGGCCTTTCCACCTGGAGGTTGACTTaGGAAGGCTCCACGTTGGGGTTTTCCCATTCCATT +
Preference number: 6 (lower is better)
Translates to: STRKGLSTWRLT*EGSTLGFSHSI
Trigger: AATGGAATGGGAAAACCCCAACGTGGAGCCTTCCAAAGTCAACCTCCAGGTGGAAAGGCCCTTCCTCGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS CAA 90 bp GAGGTTGACTTTGGAAGGCTCCACGTTGGGGTTTTCCCATTCCATTaGTGGGCAGTGCATGAAATAGCAAAGGGTGTACAGGGCCTCGGG +
Preference number: 6 (lower is better)
Translates to: EVDFGRLHVGVFPFH*WAVHEIAKGVQGLG
Trigger: CCCGAGGCCCTGTACACCCTTTGCTATTTCATGCACTGCCCACAAATGGAATGGGAAAACCCCAACGTGGAGCCTTCCAAAGTCAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS TCA 72 bp CAATGGCGGGTCTCGGGGTGGACGGATGGATATTTATaGGGAGTACTGACAACCTCCACATTCAGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: QWRVSGWTDGYL*GVLTTSTFRSA
Trigger: AGCTGACCTGAATGTGGAGGTTGTCAGTACTCCTCATAAATATCCATCCGTCCACCCCGAGACCCGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
CDS CCA 72 bp GGAAGGCTCCACGTTGGGGTTTTCCCATTCCATTTGTaGGCAGTGCATGAAATAGCAAAGGGTGTACAGGGC +
Preference number: 6 (lower is better)
Translates to: GRLHVGVFPFHL*AVHEIAKGVQG
Trigger: GCCCTGTACACCCTTTGCTATTTCATGCACTGCCCACAAATGGAATGGGAAAACCCCAACGTGGAGCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS CCA 72 bp GCGGAAAACCAATCAGCGCCCCGTGTTATTTCTATTTaGGGCTCCCTGATTGTGGACCCAAGCCTAAGGTGT +
Preference number: 6 (lower is better)
Translates to: AENQSAPRVISI*GSLIVDPSLRC
Trigger: ACACCTTAGGCTTGGGTCCACAATCAGGGAGCCCCAAATAGAAATAACACGGGGCGCTGATTGGTTTTCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS CAA 72 bp CTTTCCACCTGGAGGTTGACTTTGGAAGGCTCCACGTaGGGGTTTTCCCATTCCATTTGTGGGCAGTGCATG +
Preference number: 6 (lower is better)
Translates to: LSTWRLTLEGST*GFSHSICGQCM
Trigger: CATGCACTGCCCACAAATGGAATGGGAAAACCCCAACGTGGAGCCTTCCAAAGTCAACCTCCAGGTGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS TCA 72 bp ACCACGGAACCTTTGGAAGACGACAAGTGGATGGACTaGATTCTGATGGCCAACGTCCTCTGTAAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: TTEPLEDDKWMD*ILMANVLCKSW
Trigger: CCAGGACTTACAGAGGACGTTGGCCATCAGAATTCAGTCCATCCACTTGTCGTCTTCCAAAGGTTCCGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000494235.2
CDS CAA 90 bp CTCTGTAAGTCCTGGAGCACATCCTGGCCGGTCCCTTCACCATTTTaGTCATACAGGAGCTGCTTGAATGCTTCGTTTTCAATGAGGACC +
Preference number: 6 (lower is better)
Translates to: LCKSWSTSWPVPSPF*SYRSCLNASFSMRT
Trigger: GGTCCTCATTGAAAACGAAGCATTCAAGCAGCTCCTGTATGACAAAAATGGTGAAGGGACCGGCCAGGATGTGCTCCAGGACTTACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000494235.2
CDS CAA 90 bp AATATTATCCCTCTCGGCGATCATGTGAACATAAGGATGAGTCACTaGAAGCACCAAGCGCAGGGTCTGGAGCGGCGGAAAACCAATCAG +
Preference number: 6 (lower is better)
Translates to: NIIPLGDHVNIRMSH*KHQAQGLERRKTNQ
Trigger: CTGATTGGTTTTCCGCCGCTCCAGACCCTGCGCTTGGTGCTTCAAGTGACTCATCCTTATGTTCACATGATCGCCGAGAGGGATAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357167.8
CDS CCA 72 bp TGGGCTGCAGCCTGGCTGAAAGAGTTCATATCACCCTaGGGGGTTGTAGAAATTCCATTCCTGTACATGGTT +
Preference number: 6 (lower is better)
Translates to: WAAAWLKEFISP*GVVEIPFLYMV
Trigger: AACCATGTACAGGAATGGAATTTCTACAACCCCCCAGGGTGATATGAACTCTTTCAGCCAGGCTGCAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000490090.6
CDS TCA 72 bp CCTTGGGTAACGAGCTCCTCCGTGTATTCCTCCTCCTaGATGGTCTTAAACTCCTTTAACAAGCACTGGATG +
Preference number: 6 (lower is better)
Translates to: PWVTSSSVYSSS*MVLNSFNKHWM
Trigger: CATCCAGTGCTTGTTAAAGGAGTTTAAGACCATTCAGGAGGAGGAATACACGGAGGAGCTCGTTACCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
CDS CAA 72 bp TTTGGAAGGCTCCACGTTGGGGTTTTCCCATTCCATTaGTGGGCAGTGCATGAAATAGCAAAGGGTGTACAG +
Preference number: 6 (lower is better)
Translates to: FGRLHVGVFPFH*WAVHEIAKGVQ
Trigger: CTGTACACCCTTTGCTATTTCATGCACTGCCCACAAATGGAATGGGAAAACCCCAACGTGGAGCCTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000415943.6
ENST00000420571.6
ENST00000490090.6
ENST00000550706.5
CDS GCA 72 bp AGATGGAGTATTTCACATAACCAATCTCTATGCAGGTaGCATCATTTGTCGGCTTGCTGGAGAGGAGTGCTT +
Preference number: 6 (lower is better)
Translates to: RWSISHNQSLCR*HHLSACWRGVL
Trigger: AAGCACTCCTCTCCAGCAAGCCGACAAATGATGGCACCTGCATAGAGATTGGTTATGTGAAATACTCCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
ENST00000494235.2
CDS GCA 72 bp GCTGAAAGATGGAGTATTTCACATAACCAATCTCTATaGAGGTGCCATCATTTGTCGGCTTGCTGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: AERWSISHNQSL*RCHHLSACWRG
Trigger: TCCTCTCCAGCAAGCCGACAAATGATGGCACCTGCATAGAGATTGGTTATGTGAAATACTCCATCTTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000490090.6
ENST00000494235.2
CDS CAA 72 bp CCGGTCCCTTCACCATTTTTGTCATACAGGAGCTGCTaGAATGCTTCGTTTTCAATGAGGACCATCATGTTT +
Preference number: 6 (lower is better)
Translates to: PVPSPFLSYRSC*NASFSMRTIMF
Trigger: AAACATGATGGTCCTCATTGAAAACGAAGCATTCAAGCAGCTCCTGTATGACAAAAATGGTGAAGGGACCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280758.10
ENST00000357167.8
ENST00000420571.6
ENST00000494235.2