Pregenerated sensors for BSX (Homo sapiens)
Ensembl gene IDs: ENSG00000188909Ensembl transcript IDs: ENST00000343035.3
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTCCCCCCGGCAGCTCCGCGTaGTGCGGGTGCGGGAACAGC | + |
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Preference number: 4 (lower is better) Translates to: QEGTALGPAVSSPAYYPPPGSSA*CGCGNS Trigger: GCTGTTCCCGCACCCGCAGCACGCGGAGCTGCCGGG...GGGAGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTG 73% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | GTCTTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTTTGCGGCGGCGGCAGTaGTTCCCCGGCAGCTCCGCG | + |
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Preference number: 4 (lower is better) Translates to: VFRSRREPRSAPQSPPLPLRRRQ*FPGSSA Trigger: CGCGGAGCTGCCGGGGAAGCACTGCCGCCGCCGCAA...AGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAAGAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CCA 90 bp | CCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACGCTCTCTCCCGGGCCTaGGCTACCCCGGGCGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PVQEGTALGPAVSSPAYYALSRA*ATPGAG Trigger: TCCAGCGCCCGGGGTAGCCCAGGCCCGGGAGAGAGC...GTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR TCA 90 bp | GTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTGAGCACGTGCGGCCCTaGGCCCAGCTCCCCCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: VQEGTALGPAVSSPAYYPEHVRP*AQLPLV Trigger: GACGAGGGGGAGCTGGGCTCAGGGCCGCACGTGCTC...AGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | GGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCCTGAACCGCGGGGGCTaGCCTCGGGGCTTTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GPGGNRARPRSLLPCLLPLNRGG*PRGFLA Trigger: GGCCAGAAAGCCCCGAGGGCAGCCCCCGCGGTTCAG...GGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR TCA 90 bp | TTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTGCGTCTCGGACAGGCTaGGGGCCGTGGCCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FRSRREPRSAPQSPPLPTASRTG*GPWPAP Trigger: TGGAGCTGGCCACGGCCCTCAGCCTGTCCGAGACGC...AGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | CTTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTCCGCGTGCTGCGGGTaGGGGAACAGCGCTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: LPVQEGTALGPAVSSPAYSACCG*GNSAGT Trigger: AGTCCCAGCGCTGTTCCCGCACCCGCAGCACGCGGA...GTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | TCTTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTAGGCAGCTCCGCGTGCTaGGGGTGCGGGAACAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: SSGPGGNRARPRSLLPCLGSSAC*GCGNSA Trigger: AGCGCTGTTCCCGCACCCGCAGCACGCGGAGCTGCC...TAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | TTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTGGCTCGAATCTCCGCTaGTCTCTCCCGGGCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: FRSRREPRSAPQSPPLPTGSNLR*SLPGLG Trigger: GCCCAGGCCCGGGAGAGAGCAGCGGAGATTCGAGCC...AGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | CCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTCCCGCAGTCTCCTCCCCTaGCTACTACCCTCCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PGGNRARPRSLLPCLLPSRSLLP*LLPSPA Trigger: GGCTGGGGAGGGTAGTAGGCAGGGGAGGAGACTGCG...GGAGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CCA 90 bp | CCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACGCCCTCGGGGCTTTCTaGCCCGTCTGGTGCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PVQEGTALGPAVSSPAYYALGAF*PVWCFG Trigger: CCCAAAGCACCAGACGGGCCAGAAAGCCCCGAGGGC...GTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | TCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTCAAACCGTGCGGGCTTTaGGGCGGCGGCAGTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SRREPRSAPQSPPLPTTLKPCGL*GGGSAS Trigger: GGAAGCACTGCCGCCGCCGCAAAGCCCGCACGGTTT...GAGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | AGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTCCCCAGTCAGAGAAAACCGTaGGGGCTTTGCGGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: RREPRSAPQSPPLPTTLPSQRKP*GLCGGG Trigger: GCCGCCGCCGCAAAGCCCGCACGGTTTTCTCTGACT...GGGGAGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CCA 90 bp | CAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTCCCAGGGCCGGGACGAAGTaGAGGACGCAGGCAGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: QEGTALGPAVSSPAYYPPRAGTK*RTQAES Trigger: AGACTCTGCCTGCGTCCTCCACTTCGTCCCGGCCCT...GGGAGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CCA 90 bp | CCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACGCTGGCGAAATGGTCTaGGGCCACCTCTCTCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: PVQEGTALGPAVSSPAYYAGEMV*GHLSQR Trigger: CCGCTGAGAGAGGTGGCCCCAGACCATTTCGCCAGC...GTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CCA 90 bp | CGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCGAACAGCGCTGGGACTaGCATCCCCGAGGTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: RSRREPRSAPQSPPLPTTEQRWD*HPRGGE Trigger: CTCACCACCTCGGGGATGCCAGTCCCAGCGCTGTTC...GGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CCA 90 bp | TCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTAGTGCGGGAACAGCGCTaGGACTGGCATCCCCGAGGT | + |
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Preference number: 4 (lower is better) Translates to: SGPGGNRARPRSLLPCLLVREQR*DWHPRG Trigger: ACCTCGGGGATGCCAGTCCCAGCGCTGTTCCCGCAC...TAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CCA 90 bp | GTCTTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTCAGCTCCACTCGTTCTaGCGTGGACAGGTAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: VFRSRREPRSAPQSPPLPQLHSF*RGQVAL Trigger: CAGCGCTACCTGTCCACGCCAGAACGAGTGGAGCTG...AGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAAGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CCA 90 bp | GTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTGTCCACCTCGTCCTCTaGCTCGGTCAGCACGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: VQEGTALGPAVSSPAYYPVHLVL*LGQHEG Trigger: CCCTTCGTGCTGACCGAGCCAGAGGACGAGGTGGAC...AGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | GGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCAGCGGCTTGGGCTTGTaGAGCAGGATGTCCTCGATG | + |
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Preference number: 4 (lower is better) Translates to: GPGGNRARPRSLLPCLLPSGLGL*SRMSSM Trigger: CATCGAGGACATCCTGCTGCACAAGCCCAAGCCGCT...GGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CCA 90 bp | CAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTCCCCCTCTCTCAGCGGCTTaGGCTTGTGCAGCAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: QEGTALGPAVSSPAYYPPPLSAA*ACAAGC Trigger: ACATCCTGCTGCACAAGCCCAAGCCGCTGAGAGAGG...GGGAGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CCA 90 bp | GAGTCTTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCAGAGAGCTGGCGAAATaGTCTGGGGCCACCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: ESSGPGGNRARPRSLLPCRELAK*SGATSL Trigger: GAGAGAGGTGGCCCCAGACCATTTCGCCAGCTCTCT...GCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAAGACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CCA 90 bp | TCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTCGAGAGGCCAGAGAGCTaGCGAAATGGTCTGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SRREPRSAPQSPPLPTTLERPES*RNGLGP Trigger: TGGCCCCAGACCATTTCGCCAGCTCTCTGGCCTCTC...GAGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CCA 90 bp | GAGTCTTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCCACTCGTTCTGGCGTaGACAGGTAGCGCTGGATCT | + |
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Preference number: 4 (lower is better) Translates to: ESSGPGGNRARPRSLLPCPLVLA*TGSAGS Trigger: AGATCCAGCGCTACCTGTCCACGCCAGAACGAGTGG...GCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAAGACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR TCA 90 bp | TCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTAAAGGATGTGGGCCTCTaGGAAGACGCCGGGTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SGPGGNRARPRSLLPCLLKDVGL*EDAGCR Trigger: TCTACACCCGGCGTCTTCTCAGAGGCCCACATCCTT...TAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR TCA 90 bp | AGTCTTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCGCAGGATGTCCTCGATaGAGAAGGATGTGGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SLPVQEGTALGPAVSSPAAGCPR*RRMWAS Trigger: AGAGGCCCACATCCTTCTTCATCGAGGACATCCTGC...GGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAAGACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | GTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTCAGAGTCTCCAAGCCTaGTCGAAAGCCGGCAACCAC | + |
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Preference number: 4 (lower is better) Translates to: VQEGTALGPAVSSPAYYPQSLQA*SKAGNH Trigger: GTGGTTGCCGGCTTTCGAGCAGGCTTGGAGACTCTG...AGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | CAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTCCCAACCACGTTTTCACCTaGGTCTCGGACAGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: QEGTALGPAVSSPAYYPPNHVFT*VSDRLR Trigger: CCTCAGCCTGTCCGAGACGCAGGTGAAAACGTGGTT...GGGAGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | GTCTTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTTTCTGGCCCGTCTGGTaGTTTGGGTTCGTCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: VFRSRREPRSAPQSPPLPFWPVW*FGFVLA Trigger: AGCCAAGACGAACCCAAAGCACCAGACGGGCCAGAA...AGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAAGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR TCA 90 bp | GAGTCTTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCGCATCCCCGAGGTGGTaGGGAAATAAGGATGATGGT | + |
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Preference number: 4 (lower is better) Translates to: ESSGPGGNRARPRSLLPCASPRW*GNKDDG Trigger: ACCATCATCCTTATTTCCTCACCACCTCGGGGATGC...GCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAAGACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | TCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTATCCAAGCCCGAGAGCTaGGAGTCAGAGAAAACCGTG | + |
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Preference number: 4 (lower is better) Translates to: SGPGGNRARPRSLLPCLLSKPES*ESEKTV Trigger: CACGGTTTTCTCTGACTCGCAGCTCTCGGGCTTGGA...TAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CCA 90 bp | TCTTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTAGCTTTCTGGCCCGTCTaGTGCTTTGGGTTCGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SSGPGGNRARPRSLLPCLAFWPV*CFGFVL Trigger: CAAGACGAACCCAAAGCACCAGACGGGCCAGAAAGC...TAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | CGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCGCAGTTGCTTTTTATaGTTCATCCGCCGGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RSRREPRSAPQSPPLPTTRSCFL*FIRRFW Trigger: CCAGAACCGGCGGATGAAGCATAAAAAGCAACTGCG...GGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CCA 90 bp | AGTCTTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCGCTTTGGGTTCGTCTTaGCTTTTCCGCAGTTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SLPVQEGTALGPAVSSPAALGSS*LFRSCF Trigger: AAAGCAACTGCGGAAAAGCCAAGACGAACCCAAAGC...GGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAAGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR GCA 90 bp | TCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTATGGCTTTTCCGCAGTTaGTTTTTATGCTTCATCCGC | + |
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Preference number: 4 (lower is better) Translates to: SGPGGNRARPRSLLPCLLWLFRS*FLCFIR Trigger: GCGGATGAAGCATAAAAAGCAACTGCGGAAAAGCCA...TAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS TCA 90 bp | ACCGGCGGGCAGGCTCAGCCGAGCCTCGGCGGCGGTGGCGGCCTCTaGACCGCGGGGGCTGCCCTCGGGGCTTTCTGGCCCGTCTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: TGGQAQPSLGGGGGL*TAGAALGAFWPVWC Trigger: GCACCAGACGGGCCAGAAAGCCCCGAGGGCAGCCCCCGCGGTTCAGAGGCCGCCACCGCCGCCGAGGCTCGGCTGAGCCTGCCCGCCGGT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS CCA 90 bp | GCACGAAGGGACCGGCGGGCAGGCTCAGCCGAGCCTCGGCGGCGGTaGCGGCCTCTGAACCGCGGGGGCTGCCCTCGGGGCTTTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: ARRDRRAGSAEPRRR*RPLNRGGCPRGFLA Trigger: GGCCAGAAAGCCCCGAGGGCAGCCCCCGCGGTTCAGAGGCCGCCACCGCCGCCGAGGCTCGGCTGAGCCTGCCCGCCGGTCCCTTCGTGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS GCA 90 bp | TCAGCCGAGCCTCGGCGGCGGTGGCGGCCTCTGAACCGCGGGGGCTaGCCTCGGGGCTTTCTGGCCCGTCTGGTGCTTTGGGTTCGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SAEPRRRWRPLNRGG*PRGFLARLVLWVRL Trigger: AAGACGAACCCAAAGCACCAGACGGGCCAGAAAGCCCCGAGGGCAGCCCCCGCGGTTCAGAGGCCGCCACCGCCGCCGAGGCTCGGCTGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS TCA 90 bp | GCCTACTACCCTCCCCAGCCTGGCGGCTCAGAGCACGTGCGGCCCTaGGCCCAGCTCCCCCTCGTCTCCAATGTCCACCTCGTCCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: AYYPPQPGGSEHVRP*AQLPLVSNVHLVLW Trigger: CCAGAGGACGAGGTGGACATTGGAGACGAGGGGGAGCTGGGCTCAGGGCCGCACGTGCTCTGAGCCGCCAGGCTGGGGAGGGTAGTAGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS GCA 90 bp | TCTCCAAGCCCGAGAGCTGCGAGTCAGAGAAAACCGTGCGGGCTTTaGGGCGGCGGCAGTGCTTCCCCGGCAGCTCCGCGTGCTGCGGGT | + |
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Preference number: 5 (lower is better) Translates to: SPSPRAASQRKPCGL*GGGSASPAAPRAAG Trigger: ACCCGCAGCACGCGGAGCTGCCGGGGAAGCACTGCCGCCGCCGCAAAGCCCGCACGGTTTTCTCTGACTCGCAGCTCTCGGGCTTGGAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CAA 90 bp | TCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTCAAAACCGTGCGGGCTTaGCGGCGGCGGCAGTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: SRREPRSAPQSPPLPTTLKTVRA*RRRQCF Trigger: GAAGCACTGCCGCCGCCGCAAAGCCCGCACGGTTTT...GAGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CAA 90 bp | GTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTCTCAGCGGCTTGGGCTaGTGCAGCAGGATGTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: VQEGTALGPAVSSPAYYPLSGLG*CSRMSS Trigger: CGAGGACATCCTGCTGCACAAGCCCAAGCCGCTGAG...AGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CAA 90 bp | GTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTACCTCTCTCAGCGGCTaGGGCTTGTGCAGCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: VQEGTALGPAVSSPAYYPTSLSG*GLCSRM Trigger: CATCCTGCTGCACAAGCCCAAGCCGCTGAGAGAGGT...AGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CAA 90 bp | GGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCGGCCCGTCTGGTGCTTaGGGTTCGTCTTGGCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: GPGGNRARPRSLLPCLLPGPSGA*GSSWLF Trigger: GAAAAGCCAAGACGAACCCAAAGCACCAGACGGGCC...GGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS GCA 90 bp | CAAGGGCCGGGACGAAGTGGAGGACGCAGGCAGAGTCTCCAAGCCTaGTCGAAAGCCGGCAACCACCCTCCGAGGCTCGAATCTCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: QGPGRSGGRRQSLQA*SKAGNHPPRLESPL Trigger: CAGCGGAGATTCGAGCCTCGGAGGGTGGTTGCCGGCTTTCGAGCAGGCTTGGAGACTCTGCCTGCGTCCTCCACTTCGTCCCGGCCCTTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS CCA 90 bp | CATCTTGAGCGGAGCACCTGCCACAGGACAAGGGCCGGGACGAAGTaGAGGACGCAGGCAGAGTCTCCAAGCCTGCTCGAAAGCCGGCAA | + |
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Preference number: 5 (lower is better) Translates to: HLERSTCHRTRAGTK*RTQAESPSLLESRQ Trigger: TTGCCGGCTTTCGAGCAGGCTTGGAGACTCTGCCTGCGTCCTCCACTTCGTCCCGGCCCTTGTCCTGTGGCAGGTGCTCCGCTCAAGATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS CCA 90 bp | GGGGGTAGCCATAGTCTAGCAGAGGCACCCGAGAGGCCAGAGAGCTaGCGAAATGGTCTGGGGCCACCTCTCTCAGCGGCTTGGGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: GGSHSLAEAPERPES*RNGLGPPLSAAWAC Trigger: ACAAGCCCAAGCCGCTGAGAGAGGTGGCCCCAGACCATTTCGCCAGCTCTCTGGCCTCTCGGGTGCCTCTGCTAGACTATGGCTACCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CAA 90 bp | AGTCTTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCAAGTTGAGATTCATCTaGAGCGGAGCACCTGCCACA | + |
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Preference number: 5 (lower is better) Translates to: SLPVQEGTALGPAVSSPAKLRFI*SGAPAT Trigger: TGTGGCAGGTGCTCCGCTCAAGATGAATCTCAACTT...GGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAAGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CAA 90 bp | TCTTCCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTATGCTTTGGGTTCGTCTaGGCTTTTCCGCAGTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: SSGPGGNRARPRSLLPCLCFGFV*AFPQLL Trigger: AAGCAACTGCGGAAAAGCCAAGACGAACCCAAAGCA...TAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CAA 90 bp | TCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACCCTCAGAGGAGAGGTGAAGTaGAGATTCATCTTGAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: SRREPRSAPQSPPLPTTLRGEVK*RFILSG Trigger: TCCGCTCAAGATGAATCTCAACTTCACCTCTCCTCT...GAGGGTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS-3UTR CAA 90 bp | CCGGTCCAGGAGGGAACCGCGCTCGGCCCCGCAGTCTCCTCCCCTGCCTACTACTTGGCTTTTCCGCAGTaGCTTTTTATGCTTCATCCG | + |
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Preference number: 5 (lower is better) Translates to: PVQEGTALGPAVSSPAYYLAFPQ*LFMLHP Trigger: CGGATGAAGCATAAAAAGCAACTGCGGAAAAGCCAA...GTAGTAGGCAGGGGAGGAGACTGCGGGGCCGAGCGCGGTTCCCTCCTGGACCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS TCA 90 bp | CCACCTCTCTCAGCGGCTTGGGCTTGTGCAGCAGGATGTCCTCGATaGAGAAGGATGTGGGCCTCTGAGAAGACGCCGGGTGTAGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: PPLSAAWACAAGCPR*RRMWASEKTPGVEE Trigger: CTCCTCTACACCCGGCGTCTTCTCAGAGGCCCACATCCTTCTTCATCGAGGACATCCTGCTGCACAAGCCCAAGCCGCTGAGAGAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS GCA 72 bp | TCAGAGAAAACCGTGCGGGCTTTGCGGCGGCGGCAGTaGTTCCCCGGCAGCTCCGCGTGCTGCGGGTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: SEKTVRALRRRQ*FPGSSACCGCG Trigger: CCCGCACCCGCAGCACGCGGAGCTGCCGGGGAAGCACTGCCGCCGCCGCAAAGCCCGCACGGTTTTCTCTGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS CAA 72 bp | CCCGAGAGCTGCGAGTCAGAGAAAACCGTGCGGGCTTaGCGGCGGCGGCAGTGCTTCCCCGGCAGCTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: PESCESEKTVRA*RRRQCFPGSSA Trigger: CGCGGAGCTGCCGGGGAAGCACTGCCGCCGCCGCAAAGCCCGCACGGTTTTCTCTGACTCGCAGCTCTCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS GCA 72 bp | CCGAGAGCTGCGAGTCAGAGAAAACCGTGCGGGCTTTaGGGCGGCGGCAGTGCTTCCCCGGCAGCTCCGCGT | + |
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Preference number: 6 (lower is better) Translates to: PRAASQRKPCGL*GGGSASPAAPR Trigger: ACGCGGAGCTGCCGGGGAAGCACTGCCGCCGCCGCAAAGCCCGCACGGTTTTCTCTGACTCGCAGCTCTCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS CCA 72 bp | CGGCAGCTCCGCGTGCTGCGGGTGCGGGAACAGCGCTaGGACTGGCATCCCCGAGGTGGTGAGGAAATAAGG | + |
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Preference number: 6 (lower is better) Translates to: RQLRVLRVREQR*DWHPRGGEEIR Trigger: CCTTATTTCCTCACCACCTCGGGGATGCCAGTCCCAGCGCTGTTCCCGCACCCGCAGCACGCGGAGCTGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS CCA 72 bp | CAGCTCCCCCTCGTCTCCAATGTCCACCTCGTCCTCTaGCTCGGTCAGCACGAAGGGACCGGCGGGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: QLPLVSNVHLVL*LGQHEGTGGQA Trigger: AGCCTGCCCGCCGGTCCCTTCGTGCTGACCGAGCCAGAGGACGAGGTGGACATTGGAGACGAGGGGGAGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS CCA 72 bp | AGGCACCCGAGAGGCCAGAGAGCTGGCGAAATGGTCTaGGGCCACCTCTCTCAGCGGCTTGGGCTTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: RHPRGQRAGEMV*GHLSQRLGLVQ Trigger: CTGCACAAGCCCAAGCCGCTGAGAGAGGTGGCCCCAGACCATTTCGCCAGCTCTCTGGCCTCTCGGGTGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS GCA 72 bp | GGACGAAGTGGAGGACGCAGGCAGAGTCTCCAAGCCTaGTCGAAAGCCGGCAACCACCCTCCGAGGCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: GRSGGRRQSLQA*SKAGNHPPRLE Trigger: TTCGAGCCTCGGAGGGTGGTTGCCGGCTTTCGAGCAGGCTTGGAGACTCTGCCTGCGTCCTCCACTTCGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS CCA 72 bp | GGACAGGCTGAGGGCCGTGGCCAGCTCCACTCGTTCTaGCGTGGACAGGTAGCGCTGGATCTCGAACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: GQAEGRGQLHSF*RGQVALDLEPL Trigger: AAGAGGTTCGAGATCCAGCGCTACCTGTCCACGCCAGAACGAGTGGAGCTGGCCACGGCCCTCAGCCTGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS CCA 72 bp | CATAGTCTAGCAGAGGCACCCGAGAGGCCAGAGAGCTaGCGAAATGGTCTGGGGCCACCTCTCTCAGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: HSLAEAPERPES*RNGLGPPLSAA Trigger: AGCCGCTGAGAGAGGTGGCCCCAGACCATTTCGCCAGCTCTCTGGCCTCTCGGGTGCCTCTGCTAGACTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS CAA 72 bp | GCCGGGTGTAGAGGAGAGGTGAAGTTGAGATTCATCTaGAGCGGAGCACCTGCCACAGGACAAGGGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: AGCRGEVKLRFI*SGAPATGQGPG Trigger: TCCCGGCCCTTGTCCTGTGGCAGGTGCTCCGCTCAAGATGAATCTCAACTTCACCTCTCCTCTACACCCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS CAA 72 bp | CTGGCGAAATGGTCTGGGGCCACCTCTCTCAGCGGCTaGGGCTTGTGCAGCAGGATGTCCTCGATGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LAKWSGATSLSG*GLCSRMSSMKK Trigger: CTTCTTCATCGAGGACATCCTGCTGCACAAGCCCAAGCCGCTGAGAGAGGTGGCCCCAGACCATTTCGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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| CDS CCA 72 bp | GGGCTTTCTGGCCCGTCTGGTGCTTTGGGTTCGTCTTaGCTTTTCCGCAGTTGCTTTTTATGCTTCATCCGC | + |
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Preference number: 6 (lower is better) Translates to: GLSGPSGALGSS*LFRSCFLCFIR Trigger: GCGGATGAAGCATAAAAAGCAACTGCGGAAAAGCCAAGACGAACCCAAAGCACCAGACGGGCCAGAAAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343035.3 |
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