RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BST1 (Homo sapiens)

Ensembl gene IDs: ENSG00000109743

Ensembl transcript IDs: ENST00000265016.9, ENST00000382346.7, ENST00000505785.5, ENST00000514445.5, ENST00000514989.1

Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGAGCATTCATGTGGACGGAGCTGGACTAGGCAGGCATGCAATTaGCTCAACTCTTGCCAGAGCCTCTGGAGATTTCGGCTTCCTTGC +
Preference number: 1 (lower is better)
Translates to: GEHSCGRSWTRQACN*LNSCQSLWRFRLPC
Trigger: GCAAGGAAGCCGAAATCTCCAGAGGCTCTGGCAAGAGTTGAGTCAATTGCATGCCTGCCTAGTCCAGCTCCGTCCACATGAATGCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR TCA 90 bp CTTCCTTGCTGTGGGAGTGGAAGGCATTTACATCTTTGGACTCTCTaGCAGTCAGTATCTTCCCCATCATGGTTCCCACAGTTTCCTTGT +
Preference number: 1 (lower is better)
Translates to: LPCCGSGRHLHLWTL*QSVSSPSWFPQFPC
Trigger: ACAAGGAAACTGTGGGAACCATGATGGGGAAGATACTGACTGTCAGAGAGTCCAAAGATGTAAATGCCTTCCACTCCCACAGCAAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514445.5
3UTR-3UTR CCA 90 bp CCTCTGAAGCTTGTGGAGAGCATTCATGTGGACGGAGCTGGACTAGGCAGGCATTCCTTGCTGTGGGAGTaGAAGGCATTTACATCTTTG +
Preference number: 2 (lower is better)
Translates to: PLKLVESIHVDGAGLGRHSLLWE*KAFTSL
Trigger: CAAAGATGTAAATGCCTTCCACTCCCACAGCAAGGA...ATGCCTGCCTAGTCCAGCTCCGTCCACATGAATGCTCTCCACAAGCTTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR GCA 90 bp CCCCCACTGGCAGCATCCCCACCAGAGTGGTGGAGTGGTGCATTTGTCACAACTACAATTCTAGTATCATaGAGAGTATTTTCACCACCC +
Preference number: 2 (lower is better)
Translates to: PPLAASPPEWWSGAFVTTTILVS*RVFSPP
Trigger: GGGTGGTGAAAATACTCTGCATGATACTAGAATTGT...AGTTGTGACAAATGCACCACTCCACCACTCTGGTGGGGATGCTGCCAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR CAA 90 bp CAATTGACTCAACTCTTGCCAGAGCCTCTGGAGATTTCGGCTTCCTaGCTGTGGGAGTGGAAGGCATTTACATCTTTGGACTCTCTGACA +
Preference number: 2 (lower is better)
Translates to: QLTQLLPEPLEISAS*LWEWKAFTSLDSLT
Trigger: TGTCAGAGAGTCCAAAGATGTAAATGCCTTCCACTCCCACAGCAAGGAAGCCGAAATCTCCAGAGGCTCTGGCAAGAGTTGAGTCAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR CAA 90 bp GAGATTTCGGCTTCCTTGCTGTGGGAGTGGAAGGCATTTACATCTTaGGACTCTCTGACAGTCAGTATCTTCCCCATCATGGTTCCCACA +
Preference number: 2 (lower is better)
Translates to: EISASLLWEWKAFTS*DSLTVSIFPIMVPT
Trigger: TGTGGGAACCATGATGGGGAAGATACTGACTGTCAGAGAGTCCAAAGATGTAAATGCCTTCCACTCCCACAGCAAGGAAGCCGAAATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514445.5
3UTR-3UTR TCA 90 bp CTCTGGAGATTTCGGCTTCCTTGCTGTGGGAGTGGAAGGCATTTACATCTTTGGCATCTTTGGACTCTCTaGCAGTCAGTATCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: LWRFRLPCCGSGRHLHLWHLWTL*QSVSSP
Trigger: TGGGGAAGATACTGACTGTCAGAGAGTCCAAAGATG...CCAAAGATGTAAATGCCTTCCACTCCCACAGCAAGGAAGCCGAAATCTCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR CCA 90 bp TGGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTCACCCTTGGTGTTGTACCTTTCCTTGCTGTGGGAGTaGAAGGCATTTACATCTTTG +
Preference number: 2 (lower is better)
Translates to: WSPSLCSLPEGSPLVLYLSLLWE*KAFTSL
Trigger: CAAAGATGTAAATGCCTTCCACTCCCACAGCAAGGA...AAGGTACAACACCAAGGGTGAACCCTCAGGTAAACTACAGAGGCTGGGTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR CCA 90 bp GCAAATTTGAGCAGAAAGTACAGAGCTTCCCACATACGCTCTGTCCCCACACATTCGGCTTCCTTGCTGTaGGAGTGGAAGGCATTTACA +
Preference number: 2 (lower is better)
Translates to: ANLSRKYRASHIRSVPTHSASLL*EWKAFT
Trigger: TGTAAATGCCTTCCACTCCCACAGCAAGGAAGCCGA...ATGTGTGGGGACAGAGCGTATGTGGGAAGCTCTGTACTTTCTGCTCAAATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR TCA 90 bp TACCTGAGGGTTCACCCTTGGTGTTGTACCTTCTGTAGGTTTGGACACATATATAGGCAGGCATGCAATTaGCTCAACTCTTGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: YLRVHPWCCTFCRFGHIYRQACN*LNSCQS
Trigger: GCTCTGGCAAGAGTTGAGTCAATTGCATGCCTGCCT...ATATATGTGTCCAAACCTACAGAAGGTACAACACCAAGGGTGAACCCTCAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR CCA 90 bp ACAACTAATGAACCGACATTGAAACATCATGGTCACCCAGCCTCTGTAGTTTACTCGGCTTCCTTGCTGTaGGAGTGGAAGGCATTTACA +
Preference number: 2 (lower is better)
Translates to: TTNEPTLKHHGHPASVVYSASLL*EWKAFT
Trigger: TGTAAATGCCTTCCACTCCCACAGCAAGGAAGCCGA...GTAAACTACAGAGGCTGGGTGACCATGATGTTTCAATGTCGGTTCATTAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR TCA 90 bp CCTTCTGTAGGTTTGGACACATATATAATCACCTGTATCCACAATTCTAGTATCAGGCAGGCATGCAATTaGCTCAACTCTTGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: PSVGLDTYIITCIHNSSIRQACN*LNSCQS
Trigger: GCTCTGGCAAGAGTTGAGTCAATTGCATGCCTGCCT...GATACTAGAATTGTGGATACAGGTGATTATATATGTGTCCAAACCTACAGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR CCA 90 bp GGTTTGGACACATATATAATCACCTGTATCCACAATTCTAGTATCATGCAGAGTTCATGTGGACGGAGCTaGACTAGGCAGGCATGCAAT +
Preference number: 2 (lower is better)
Translates to: GLDTYIITCIHNSSIMQSSCGRS*TRQACN
Trigger: ATTGCATGCCTGCCTAGTCCAGCTCCGTCCACATGA...ACTCTGCATGATACTAGAATTGTGGATACAGGTGATTATATATGTGTCCAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR TCA 90 bp TTTCACCACCCTAAATATTTGGGAGTCCATTTTATCCTGTTTCCTCTGAAGCTTCATCTTTGGACTCTCTaGCAGTCAGTATCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: FHHPKYLGVHFILFPLKLHLWTL*QSVSSP
Trigger: TGGGGAAGATACTGACTGTCAGAGAGTCCAAAGATG...AAGCTTCAGAGGAAACAGGATAAAATGGACTCCCAAATATTTAGGGTGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR TCA 90 bp GGTTTGGACACATATATAATCACCTGTATCCACAATTCTAGTATCATGCAGAGTTTATCCTGTTTCCTCTaGAGCTTGTGGAGAGCATTC +
Preference number: 2 (lower is better)
Translates to: GLDTYIITCIHNSSIMQSLSCFL*SLWRAF
Trigger: GAATGCTCTCCACAAGCTTCAGAGGAAACAGGATAA...ACTCTGCATGATACTAGAATTGTGGATACAGGTGATTATATATGTGTCCAAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR GCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATCAGTCTGACTCCCAATaGTTTGTGTCATTATACAAA +
Preference number: 2 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDQSDSQ*FVSLYK
Trigger: TTTGTATAATGACACAAAGCATTGGGAGTCAGACTG...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
3UTR-3UTR CCA 90 bp TCTAGTATCATGCAGAGTATTTTCACCACCCTAAATATTTGGGAGTCCATTTTAGTATCTTCCCCATCATaGTTCCCACAGTTTCCTTGT +
Preference number: 2 (lower is better)
Translates to: SSIMQSIFTTLNIWESILVSSPS*FPQFPC
Trigger: ACAAGGAAACTGTGGGAACCATGATGGGGAAGATAC...TAAAATGGACTCCCAAATATTTAGGGTGGTGAAAATACTCTGCATGATACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514445.5
3UTR-3UTR CCA 90 bp GTACCTTCTGTAGGTTTGGACACATATATAATCACCTGTATCCACAATTCTAGTACCACCCTAAATATTTaGGAGTCCATTTTATCCTGT +
Preference number: 2 (lower is better)
Translates to: VPSVGLDTYIITCIHNSSTTLNI*ESILSC
Trigger: ACAGGATAAAATGGACTCCCAAATATTTAGGGTGGT...ACTAGAATTGTGGATACAGGTGATTATATATGTGTCCAAACCTACAGAAGGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR TCA 72 bp TCATGTGGACGGAGCTGGACTAGGCAGGCATGCAATTaGCTCAACTCTTGCCAGAGCCTCTGGAGATTTCGG +
Preference number: 3 (lower is better)
Translates to: SCGRSWTRQACN*LNSCQSLWRFR
Trigger: CCGAAATCTCCAGAGGCTCTGGCAAGAGTTGAGTCAATTGCATGCCTGCCTAGTCCAGCTCCGTCCACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR CAA 90 bp CCAGCCTCTGTAGTTTACCTGAGGGTTCACCCTTGGTGTTGTACCTTCTGTAGGGAGATTTCGGCTTCCTaGCTGTGGGAGTGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: PASVVYLRVHPWCCTFCREISAS*LWEWKA
Trigger: TGCCTTCCACTCCCACAGCAAGGAAGCCGAAATCTC...CCTACAGAAGGTACAACACCAAGGGTGAACCCTCAGGTAAACTACAGAGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR CCA 72 bp GAGCCTCTGGAGATTTCGGCTTCCTTGCTGTGGGAGTaGAAGGCATTTACATCTTTGGACTCTCTGACAGTC +
Preference number: 3 (lower is better)
Translates to: EPLEISASLLWE*KAFTSLDSLTV
Trigger: GACTGTCAGAGAGTCCAAAGATGTAAATGCCTTCCACTCCCACAGCAAGGAAGCCGAAATCTCCAGAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR CAA 90 bp ACCGACATTGAAACATCATGGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTCACAATTGACTCAACTCTaGCCAGAGCCTCTGGAGATT +
Preference number: 3 (lower is better)
Translates to: TDIETSWSPSLCSLPEGSQLTQL*PEPLEI
Trigger: AATCTCCAGAGGCTCTGGCAAGAGTTGAGTCAATTG...TGAACCCTCAGGTAAACTACAGAGGCTGGGTGACCATGATGTTTCAATGTCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR CAA 90 bp TGGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTCACCCTTGGTGTTGTACCTTCACCACCCTAAATATTaGGGAGTCCATTTTATCCTG +
Preference number: 3 (lower is better)
Translates to: WSPSLCSLPEGSPLVLYLHHPKY*GVHFIL
Trigger: CAGGATAAAATGGACTCCCAAATATTTAGGGTGGTG...AAGGTACAACACCAAGGGTGAACCCTCAGGTAAACTACAGAGGCTGGGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR CAA 90 bp GAACCGACATTGAAACATCATGGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTCACCACCCTAAATATTaGGGAGTCCATTTTATCCTG +
Preference number: 3 (lower is better)
Translates to: EPTLKHHGHPASVVYLRVHHPKY*GVHFIL
Trigger: CAGGATAAAATGGACTCCCAAATATTTAGGGTGGTG...AACCCTCAGGTAAACTACAGAGGCTGGGTGACCATGATGTTTCAATGTCGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR CAA 90 bp AGGTTCACAGCAAATTTGAGCAGAAAGTACAGAGCTTCCCACATACGCTCTGTCAAGGCATTTACATCTTaGGACTCTCTGACAGTCAGT +
Preference number: 3 (lower is better)
Translates to: RFTANLSRKYRASHIRSVKAFTS*DSLTVS
Trigger: ACTGACTGTCAGAGAGTCCAAAGATGTAAATGCCTT...GACAGAGCGTATGTGGGAAGCTCTGTACTTTCTGCTCAAATTTGCTGTGAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR CAA 90 bp GGTTTGGACACATATATAATCACCTGTATCCACAATTCTAGTATCATGCAGAGTGAGATTTCGGCTTCCTaGCTGTGGGAGTGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: GLDTYIITCIHNSSIMQSEISAS*LWEWKA
Trigger: TGCCTTCCACTCCCACAGCAAGGAAGCCGAAATCTC...ACTCTGCATGATACTAGAATTGTGGATACAGGTGATTATATATGTGTCCAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR-3UTR CAA 90 bp AGTATCATGCAGAGTATTTTCACCACCCTAAATATTTGGGAGTCCATTTTATCCCAATTGACTCAACTCTaGCCAGAGCCTCTGGAGATT +
Preference number: 3 (lower is better)
Translates to: SIMQSIFTTLNIWESILSQLTQL*PEPLEI
Trigger: AATCTCCAGAGGCTCTGGCAAGAGTTGAGTCAATTG...GGATAAAATGGACTCCCAAATATTTAGGGTGGTGAAAATACTCTGCATGATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGGCAAGTGTGCGCTGGTaGCCTCCCCGCGCCACCGCG +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQASVRW*PPRATA
Trigger: CGCGGTGGCGCGGGGAGGGCACCAGCGCACACTTGC...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGGATGTCCCGCAAGTGTaGGCTGGTGCCCTCCCCGCG +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQDVPQV*AGALPA
Trigger: CGCGGGGAGGGCACCAGCGCACACTTGCGGGACATC...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGCTCGGGACTCAGCAGTaGGCGGTACTCGGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQLGTQQ*AVLGAA
Trigger: CGCTGCGCCGAGTACCGCGCACTGCTGAGTCCCGAG...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGGATGCCGCGCACCCCTaGGCCGCCATCGGGGAACTT +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQDAAHP*AAIGEL
Trigger: AAGTTCCCCGATGGCGGCCCAGGGGTGCGCGGCATC...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGAGCTGCAGCAGCAGCTaGAGCAGCCGCGATGCCGCG +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQSCSSS*SSRDAA
Trigger: CGCGGCATCGCGGCTGCTCCAGCTGCTGCTGCAGCT...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATCCCGCAAGTGTGCGCTaGTGCCCTCCCCGCGCCACC +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDPASVR*CPPRAT
Trigger: GGTGGCGCGGGGAGGGCACCAGCGCACACTTGCGGG...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR TCA 90 bp CCAGAGCCTCTGGAGATTTCGGCTTCCTTGCTGTGGGAGTGGAAGGCATTTACAAGGCAGGCATGCAATTaGCTCAACTCTTGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PEPLEISASLLWEWKAFTRQACN*LNSCQS
Trigger: GCTCTGGCAAGAGTTGAGTCAATTGCATGCCTGCCT...TGTAAATGCCTTCCACTCCCACAGCAAGGAAGCCGAAATCTCCAGAGGCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR GCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATCTCGGGACTCAGCAGTaGGCGGTACTCGGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDLGTQQ*AVLGAA
Trigger: CGCTGCGCCGAGTACCGCGCACTGCTGAGTCCCGAG...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp CCAGCCTCTGTAGTTTACCTGAGGGTTCACCCTTGGTGTTGTACCTTCTGTAGGCCAGGACTTTCATGCTaGCTTCCCCGCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: PASVVYLRVHPWCCTFCRPGLSC*LPRRIP
Trigger: TGGAATCCTGCGGGGAAGGCAGCATGAAAGTCCTGG...CCTACAGAAGGTACAACACCAAGGGTGAACCCTCAGGTAAACTACAGAGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp TCTGAAGCTTGTGGAGAGCATTCATGTGGACGGAGCTGGACTAGGCAGGCATGCTCGGCTTCCTTGCTGTaGGAGTGGAAGGCATTTACA +
Preference number: 4 (lower is better)
Translates to: SEACGEHSCGRSWTRQACSASLL*EWKAFT
Trigger: TGTAAATGCCTTCCACTCCCACAGCAAGGAAGCCGA...GCATGCCTGCCTAGTCCAGCTCCGTCCACATGAATGCTCTCCACAAGCTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR TCA 90 bp GAGCCTCTGGAGATTTCGGCTTCCTTGCTGTGGGAGTGGAAGGCATTTACATCTAGGCAGGCATGCAATTaGCTCAACTCTTGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: EPLEISASLLWEWKAFTSRQACN*LNSCQS
Trigger: GCTCTGGCAAGAGTTGAGTCAATTGCATGCCTGCCT...AGATGTAAATGCCTTCCACTCCCACAGCAAGGAAGCCGAAATCTCCAGAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGGCCATCGGGGAACTTTaGTCCCTCCAGTCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQAIGEL*SLQSRA
Trigger: AGCACGGGACTGGAGGGACCAAAGTTCCCCGATGGC...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp TGGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTCACCCTTGGTGTTGTACCTTTCATGTGGACGGAGCTaGACTAGGCAGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: WSPSLCSLPEGSPLVLYLSCGRS*TRQACN
Trigger: ATTGCATGCCTGCCTAGTCCAGCTCCGTCCACATGA...AAGGTACAACACCAAGGGTGAACCCTCAGGTAAACTACAGAGGCTGGGTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp CAGAGCCTCTGGAGATTTCGGCTTCCTTGCTGTGGGAGTGGAAGGCATTTACATTCCCCACCAGAGTGGTaGAGTGGTGCATTTGTCACA +
Preference number: 4 (lower is better)
Translates to: QSLWRFRLPCCGSGRHLHSPPEW*SGAFVT
Trigger: TGTGACAAATGCACCACTCCACCACTCTGGTGGGGA...ATGTAAATGCCTTCCACTCCCACAGCAAGGAAGCCGAAATCTCCAGAGGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR TCA 90 bp ACCGACATTGAAACATCATGGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTCAGGCTCCTGTTGGCTCTaGACCATTCAGCATGACGTG +
Preference number: 4 (lower is better)
Translates to: TDIETSWSPSLCSLPEGSGSCWL*TIQHDV
Trigger: CACGTCATGCTGAATGGTTCAGAGCCAACAGGAGCC...TGAACCCTCAGGTAAACTACAGAGGCTGGGTGACCATGATGTTTCAATGTCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGCAGTTCTTGTTCCGCTaGTCGGGACTCAGCAGTGCG +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQQFLFR*SGLSSA
Trigger: CGCACTGCTGAGTCCCGAGCAGCGGAACAAGAACTG...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265016.9
CDS-3UTR GCA 90 bp TCTGAAGCTTGTGGAGAGCATTCATGTGGACGGAGCTGGACTAGGCAGGCATGCGGTCCCCCAATTTCATaGATAACCCAGATCTCGATT +
Preference number: 4 (lower is better)
Translates to: SEACGEHSCGRSWTRQACGPPIS*ITQISI
Trigger: AATCGAGATCTGGGTTATGCATGAAATTGGGGGACC...GCATGCCTGCCTAGTCCAGCTCCGTCCACATGAATGCTCTCCACAAGCTTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp CTGGCAGCATCCCCACCAGAGTGGTGGAGTGGTGCATTTGTCACAACTAATGAACCCCAGAACTATCCTTaGAATACTGGATGGATGCCC +
Preference number: 4 (lower is better)
Translates to: LAASPPEWWSGAFVTTNEPQNYP*NTGWMP
Trigger: GGGCATCCATCCAGTATTCCAAGGATAGTTCTGGGG...TTCATTAGTTGTGACAAATGCACCACTCCACCACTCTGGTGGGGATGCTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR CCA 90 bp ACATCATGGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTCACCCTTGGTGTTGCGCAGGATTCCACATTaGGTCCCCCAATTTCATGCA +
Preference number: 4 (lower is better)
Translates to: TSWSPSLCSLPEGSPLVLRRIPH*VPQFHA
Trigger: TGCATGAAATTGGGGGACCCAATGTGGAATCCTGCG...CAACACCAAGGGTGAACCCTCAGGTAAACTACAGAGGCTGGGTGACCATGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp CCAGCCTCTGTAGTTTACCTGAGGGTTCACCCTTGGTGTTGTACCTTCTGTAGGCGCAGGATTCCACATTaGGTCCCCCAATTTCATGCA +
Preference number: 4 (lower is better)
Translates to: PASVVYLRVHPWCCTFCRRRIPH*VPQFHA
Trigger: TGCATGAAATTGGGGGACCCAATGTGGAATCCTGCG...CCTACAGAAGGTACAACACCAAGGGTGAACCCTCAGGTAAACTACAGAGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGAAGGCACAGTCAGGATaGGTGCTGTGGTCCACGCAC +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQKAQSG*VLWSTH
Trigger: GTGCGTGGACCACAGCACCCATCCTGACTGTGCCTT...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
3UTR CAA 72 bp CAACTCTTGCCAGAGCCTCTGGAGATTTCGGCTTCCTaGCTGTGGGAGTGGAAGGCATTTACATCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: QLLPEPLEISAS*LWEWKAFTSLD
Trigger: GTCCAAAGATGTAAATGCCTTCCACTCCCACAGCAAGGAAGCCGAAATCTCCAGAGGCTCTGGCAAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR TCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGAAAAAGGTCATAGTCTaGGGGCAGCACGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQKKVIV*GQHGAG
Trigger: CCCTGCTCCGTGCTGCCCTCAGACTATGACCTTTTT...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATGTCCCTCCAGTCCCGTaGTTCCTCCACTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDVPPVP*FLHSPS
Trigger: AGAAGGGGAGTGGAGGAAGCACGGGACTGGAGGGAC...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGCCAGGACTTTCATGCTaGCTTCCCCGCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQPGLSC*LPRRIP
Trigger: TGGAATCCTGCGGGGAAGGCAGCATGAAAGTCCTGG...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGCACAGTCAGGATGGGTaGTGTGGTCCACGCACTGTA +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQHSQDG*CGPRTV
Trigger: TACAGTGCGTGGACCACAGCACCCATCCTGACTGTG...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp AGGTTCACAGCAAATTTGAGCAGAAAGTACAGAGCTTCCCACATACGCTCTGTCCACAGTCAGGATGGGTaGTGTGGTCCACGCACTGTA +
Preference number: 4 (lower is better)
Translates to: RFTANLSRKYRASHIRSVHSQDG*CGPRTV
Trigger: TACAGTGCGTGGACCACAGCACCCATCCTGACTGTG...GACAGAGCGTATGTGGGAAGCTCTGTACTTTCTGCTCAAATTTGCTGTGAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR GCA 90 bp AATTTGAGCAGAAAGTACAGAGCTTCCCACATACGCTCTGTCCCCACACATACACACAGTCAGGATGGGTaGTGTGGTCCACGCACTGTA +
Preference number: 4 (lower is better)
Translates to: NLSRKYRASHIRSVPTHTHSQDG*CGPRTV
Trigger: TACAGTGCGTGGACCACAGCACCCATCCTGACTGTG...TGTATGTGTGGGGACAGAGCGTATGTGGGAAGCTCTGTACTTTCTGCTCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGAACACGAATGATGACTaGAAGGGGAGGCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQNTNDD*KGRLQG
Trigger: GCCCTGCAGCCTCCCCTTGCAGTCATCATTCGTGTT...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGCCTGGAAGCAGAGGTTaGAGTGAGCTGAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQPGSRG*SELRSP
Trigger: GGGAGATCTCAGCTCACTGCAACCTCTGCTTCCAGG...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATGCCATCGGGGAACTTTaGTCCCTCCAGTCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDAIGEL*SLQSRA
Trigger: AGCACGGGACTGGAGGGACCAAAGTTCCCCGATGGC...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp GAAGCTTGTGGAGAGCATTCATGTGGACGGAGCTGGACTAGGCAGGCATGCAATTTAATACAGCTGTACTaGAACCCCATGTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: EACGEHSCGRSWTRQACNLIQLY*NPMSFS
Trigger: GCTGAAGGACATGGGGTTCCAGTACAGCTGTATTAA...ATTGCATGCCTGCCTAGTCCAGCTCCGTCCACATGAATGCTCTCCACAAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGTCAGGATGGGTGCTGTaGTCCACGCACTGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQSGWVL*STHCKS
Trigger: GCTCTTACAGTGCGTGGACCACAGCACCCATCCTGA...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp GAGCCTCTGGAGATTTCGGCTTCCTTGCTGTGGGAGTGGAAGGCATTTACATCTTCCCACATAGCCTCTTaGGTGACTTTAAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: EPLEISASLLWEWKAFTSSHIAS*VTLRHS
Trigger: ACTGTGCCTTAAAGTCACCCAAGAGGCTATGTGGGA...AGATGTAAATGCCTTCCACTCCCACAGCAAGGAAGCCGAAATCTCCAGAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR CCA 90 bp CATCCCCACCAGAGTGGTGGAGTGGTGCATTTGTCACAACTAATGAACCGACATTGTATGGTTCTGCTCTaGGTCGCACTCCTAATGTCC +
Preference number: 4 (lower is better)
Translates to: HPHQSGGVVHLSQLMNRHCMVLL*VALLMS
Trigger: GGACATTAGGAGTGCGACCCAGAGCAGAACCATACA...ATGTCGGTTCATTAGTTGTGACAAATGCACCACTCCACCACTCTGGTGGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR TCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGCTGAACCATTCAGCATaGCGTGGATCACCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQLNHSA*RGSPQN
Trigger: GTTCTGGGGTGATCCACGTCATGCTGAATGGTTCAG...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR TCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATCTTGGGGCTTTTCTTTaGGTAGCGGCTGCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDLGAFL*VAAAAD
Trigger: GTCGGCAGCAGCCGCTACTCAAAGAAAAGCCCCAAG...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR TCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATGAGGTTGCAGTGAGCTaGGATCTCCCCACCTCACTC +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDEVAVS*DLPTSL
Trigger: GAGTGAGGTGGGGAGATCTCAGCTCACTGCAACCTC...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR TCA 90 bp CATCCCCACCAGAGTGGTGGAGTGGTGCATTTGTCACAACTAATGAACCGACATCATCTTTGGACTCTCTaGCAGTCAGTATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HPHQSGGVVHLSQLMNRHHLWTL*QSVSSP
Trigger: TGGGGAAGATACTGACTGTCAGAGAGTCCAAAGATG...ATGTCGGTTCATTAGTTGTGACAAATGCACCACTCCACCACTCTGGTGGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR TCA 90 bp CTGGCAGCATCCCCACCAGAGTGGTGGAGTGGTGCATTTGTCACAACTAATGAATTATCCTGTTTCCTCTaGAGCTTGTGGAGAGCATTC +
Preference number: 4 (lower is better)
Translates to: LAASPPEWWSGAFVTTNELSCFL*SLWRAF
Trigger: GAATGCTCTCCACAAGCTTCAGAGGAAACAGGATAA...TTCATTAGTTGTGACAAATGCACCACTCCACCACTCTGGTGGGGATGCTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR TCA 90 bp GGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTCACCCTTGGTGTTGTACCTTCGGTTCACAGCAAATTTaGGCAGAAAGTACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GHPASVVYLRVHPWCCTFGSQQI*AESTEL
Trigger: AAGCTCTGTACTTTCTGCTCAAATTTGCTGTGAACC...GAAGGTACAACACCAAGGGTGAACCCTCAGGTAAACTACAGAGGCTGGGTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGTTTCTTATTTGCCGCTaGTCGGGACTCAGCAGTGCG +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQFLICR*SGLSSA
Trigger: CGCACTGCTGAGTCCCGAGCAGCGGCAAATAAGAAA...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382346.7
CDS-3UTR CCA 90 bp GAGCCTCTGGAGATTTCGGCTTCCTTGCTGTGGGAGTGGAAGGCATTTACATCTCCTTGGAATACTGGATaGATGCCCTTTTCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: EPLEISASLLWEWKAFTSPWNTG*MPFSKR
Trigger: CCTTTTGGAAAAGGGCATCCATCCAGTATTCCAAGG...AGATGTAAATGCCTTCCACTCCCACAGCAAGGAAGCCGAAATCTCCAGAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR CCA 90 bp TGGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTCACCCTTGGTGTTGTACCTTTTAATACAGCTGTACTaGAACCCCATGTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: WSPSLCSLPEGSPLVLYLLIQLY*NPMSFS
Trigger: GCTGAAGGACATGGGGTTCCAGTACAGCTGTATTAA...AAGGTACAACACCAAGGGTGAACCCTCAGGTAAACTACAGAGGCTGGGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATAAGGCACAGTCAGGATaGGTGCTGTGGTCCACGCAC +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDKAQSG*VLWSTH
Trigger: GTGCGTGGACCACAGCACCCATCCTGACTGTGCCTT...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp ACCGACATTGAAACATCATGGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTCATCGGCTTCCTTGCTGTaGGAGTGGAAGGCATTTACA +
Preference number: 4 (lower is better)
Translates to: TDIETSWSPSLCSLPEGSSASLL*EWKAFT
Trigger: TGTAAATGCCTTCCACTCCCACAGCAAGGAAGCCGA...TGAACCCTCAGGTAAACTACAGAGGCTGGGTGACCATGATGTTTCAATGTCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
3UTR CAA 72 bp GCTTCCTTGCTGTGGGAGTGGAAGGCATTTACATCTTaGGACTCTCTGACAGTCAGTATCTTCCCCATCATG +
Preference number: 4 (lower is better)
Translates to: ASLLWEWKAFTS*DSLTVSIFPIM
Trigger: CATGATGGGGAAGATACTGACTGTCAGAGAGTCCAAAGATGTAAATGCCTTCCACTCCCACAGCAAGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR TCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATAAAAAGGTCATAGTCTaGGGGCAGCACGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDKKVIV*GQHGAG
Trigger: CCCTGCTCCGTGCTGCCCTCAGACTATGACCTTTTT...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR TCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATGGCTCCTGTTGGCTCTaGACCATTCAGCATGACGTG +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDGSCWL*TIQHDV
Trigger: CACGTCATGCTGAATGGTTCAGAGCCAACAGGAGCC...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR TCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATAAGCAGAGGTTGCAGTaGGCTGAGATCTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDKQRLQ*AEISPP
Trigger: AGGTGGGGAGATCTCAGCTCACTGCAACCTCTGCTT...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR TCA 90 bp CTGGCAGCATCCCCACCAGAGTGGTGGAGTGGTGCATTTGTCACAACTAATGAAGGTTCACAGCAAATTTaGGCAGAAAGTACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LAASPPEWWSGAFVTTNEGSQQI*AESTEL
Trigger: AAGCTCTGTACTTTCTGCTCAAATTTGCTGTGAACC...TTCATTAGTTGTGACAAATGCACCACTCCACCACTCTGGTGGGGATGCTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGTTTCCAGGACTTTCATaGTGCCTTCCCCGCAGGATT +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQFPGLS*CLPRRI
Trigger: AATCCTGCGGGGAAGGCAGCATGAAAGTCCTGGAAA...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp GCATTTACATCTTTGGACTCTCTGACAGTCAGTATCTTCCCCATCATGGTTCCCTTTCCAGGACTTTCATaGTGCCTTCCCCGCAGGATT +
Preference number: 4 (lower is better)
Translates to: AFTSLDSLTVSIFPIMVPFPGLS*CLPRRI
Trigger: AATCCTGCGGGGAAGGCAGCATGAAAGTCCTGGAAA...GGGAACCATGATGGGGAAGATACTGACTGTCAGAGAGTCCAAAGATGTAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR GCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATCCTGGAAGCAGAGGTTaGAGTGAGCTGAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDPGSRG*SELRSP
Trigger: GGGAGATCTCAGCTCACTGCAACCTCTGCTTCCAGG...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGCCATTCAGCATGACGTaGATCACCCCAGAACTATCC +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQPFSMT*ITPELS
Trigger: GGATAGTTCTGGGGTGATCCACGTCATGCTGAATGG...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR TCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATCTGAACCATTCAGCATaGCGTGGATCACCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDLNHSA*RGSPQN
Trigger: GTTCTGGGGTGATCCACGTCATGCTGAATGGTTCAG...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR TCA 90 bp AGTGGTGCATTTGTCACAACTAATGAACCGACATTGAAACATCATGGTCACCCACTGAACCATTCAGCATaGCGTGGATCACCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SGAFVTTNEPTLKHHGHPLNHSA*RGSPQN
Trigger: GTTCTGGGGTGATCCACGTCATGCTGAATGGTTCAG...TGGGTGACCATGATGTTTCAATGTCGGTTCATTAGTTGTGACAAATGCACCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR TCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATGTTTCCAGTTACAGTTaGGTCCTGGAAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDVSSYS*VLEAST
Trigger: GGTGCTGGCTTCCAGGACTCAACTGTAACTGGAAAC...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGACGACGGGTGTTGTCTaGAAAGCTGTTAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQTTGVV*KAVNKE
Trigger: CTCCTTGTTAACAGCTTTGCAGACAACACCCGTCGT...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGCCAGCTCAAGAAATCTaGAACCCTGCCATACAGAAC +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQPAQEI*NPAIQN
Trigger: GTTCTGTATGGCAGGGTTGCAGATTTCTTGAGCTGG...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp GAACCGACATTGAAACATCATGGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTGGTCCCCCAATTTCATaGATAACCCAGATCTCGATT +
Preference number: 4 (lower is better)
Translates to: EPTLKHHGHPASVVYLRVGPPIS*ITQISI
Trigger: AATCGAGATCTGGGTTATGCATGAAATTGGGGGACC...AACCCTCAGGTAAACTACAGAGGCTGGGTGACCATGATGTTTCAATGTCGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR GCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATCTTCCCAGATGGCTGTaGAGTTCTTGTTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDLPRWL*SSCSGW
Trigger: CCACCCAGAACAAGAACTGCACAGCCATCTGGGAAG...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382346.7
CDS-3UTR CCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGGTTACAGTTGAGTCCTaGAAGCCAGCACCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQVTVES*KPAPER
Trigger: TCTTTCTGGTGCTGGCTTCCAGGACTCAACTGTAAC...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATATTAGCTGGACATGGTaGCAGGCACCTGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDISWTW*QAPAIP
Trigger: TGGGATTGCAGGTGCCTGCCACCATGTCCAGCTAAT...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGAAAATTAGCTGGACATaGTGGCAGGCACCTGCAATC +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQKISWT*WQAPAI
Trigger: GATTGCAGGTGCCTGCCACCATGTCCAGCTAATTTT...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGGTGCAGTTCTTGTTCTaGGTGGTGTGTAACACAGGT +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQVQFLF*VVCNTG
Trigger: ACCTGTGTTACACACCACCCAGAACAAGAACTGCAC...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382346.7
CDS-3UTR CCA 90 bp TTTCACCACCCTAAATATTTGGGAGTCCATTTTATCCTGTTTCCTCTGAAGCTTGAACCGGCGGTTGTATaGTTCTGCTCTGGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: FHHPKYLGVHFILFPLKLEPAVV*FCSGSH
Trigger: GTGCGACCCAGAGCAGAACCATACAACCGCCGGTTC...AAGCTTCAGAGGAAACAGGATAAAATGGACTCCCAAATATTTAGGGTGGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR CCA 90 bp ACCGACATTGAAACATCATGGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTCAGACATTGAAACATCATaGTCACCCAGCCTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: TDIETSWSPSLCSLPEGSDIETS*SPSLCS
Trigger: ACTACAGAGGCTGGGTGACCATGATGTTTCAATGTC...TGAACCCTCAGGTAAACTACAGAGGCTGGGTGACCATGATGTTTCAATGTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGAGAAATCTGCAACCCTaGCATACAGAACATCGCTCA +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQRNLQP*HTEHRS
Trigger: TGAGCGATGTTCTGTATGGCAGGGTTGCAGATTTCT...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGGGTCCCCCAATTTCATaGATAACCCAGATCTCGATT +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQGPPIS*ITQISI
Trigger: AATCGAGATCTGGGTTATGCATGAAATTGGGGGACC...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATTTTCCAGGACTTTCATaGTGCCTTCCCCGCAGGATT +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDFPGLS*CLPRRI
Trigger: AATCCTGCGGGGAAGGCAGCATGAAAGTCCTGGAAA...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATAGCAATCAACAAGCATaGAGTGTCCGTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDSNQQA*SVRAAG
Trigger: TCCAGCAGCACGGACACTGCATGCTTGTTGATTGCT...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGCTGTTAACAAGGAGGTaGCTATTTTCCCAGAACAGG +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQLLTRR*LFSQNR
Trigger: CCTGTTCTGGGAAAATAGCCACCTCCTTGTTAACAG...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATCCCCAGAACTATCCTTaGAATACTGGATGGATGCCC +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDPQNYP*NTGWMP
Trigger: GGGCATCCATCCAGTATTCCAAGGATAGTTCTGGGG...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATCCATTCAGCATGACGTaGATCACCCCAGAACTATCC +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDPFSMT*ITPELS
Trigger: GGATAGTTCTGGGGTGATCCACGTCATGCTGAATGG...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp TTTGTCACAACTAATGAACCGACATTGAAACATCATGGTCACCCAGCCTCTGTACCATTCAGCATGACGTaGATCACCCCAGAACTATCC +
Preference number: 4 (lower is better)
Translates to: FVTTNEPTLKHHGHPASVPFSMT*ITPELS
Trigger: GGATAGTTCTGGGGTGATCCACGTCATGCTGAATGG...TACAGAGGCTGGGTGACCATGATGTTTCAATGTCGGTTCATTAGTTGTGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR CCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATCGCAGGATTCCACATTaGGTCCCCCAATTTCATGCA +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDRRIPH*VPQFHA
Trigger: TGCATGAAATTGGGGGACCCAATGTGGAATCCTGCG...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp ATCACCTGTATCCACAATTCTAGTATCATGCAGAGTATTTTCACCACCCTAAATAAGGCACAGTCAGGATaGGTGCTGTGGTCCACGCAC +
Preference number: 4 (lower is better)
Translates to: ITCIHNSSIMQSIFTTLNKAQSG*VLWSTH
Trigger: GTGCGTGGACCACAGCACCCATCCTGACTGTGCCTT...ATTTAGGGTGGTGAAAATACTCTGCATGATACTAGAATTGTGGATACAGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp GTTTACCTGAGGGTTCACCCTTGGTGTTGTACCTTCTGTAGGTTTGGACACATAGTATCTTCCCCATCATaGTTCCCACAGTTTCGACTT +
Preference number: 4 (lower is better)
Translates to: VYLRVHPWCCTFCRFGHIVSSPS*FPQFRL
Trigger: AAGTCGAAACTGTGGGAACCATGATGGGGAAGATAC...TATGTGTCCAAACCTACAGAAGGTACAACACCAAGGGTGAACCCTCAGGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514989.1
CDS-3UTR TCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGATTTTCACAGTCTTCTaGTGTAGGGCAGGATTGGTA +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQIFTVF*CRAGLV
Trigger: TACCAATCCTGCCCTACATCAGAAGACTGTGAAAAT...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR TCA 90 bp TGGTGGAGTGGTGCATTTGTCACAACTAATGAACCGACATTGAAACATCATGGTCATCTTTGGACTCTCTaGCAGTCAGTATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: WWSGAFVTTNEPTLKHHGHLWTL*QSVSSP
Trigger: TGGGGAAGATACTGACTGTCAGAGAGTCCAAAGATG...ACCATGATGTTTCAATGTCGGTTCATTAGTTGTGACAAATGCACCACTCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR GCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATACGACGGGTGTTGTCTaGAAAGCTGTTAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDTTGVV*KAVNKE
Trigger: CTCCTTGTTAACAGCTTTGCAGACAACACCCGTCGT...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATCCAGCTCAAGAAATCTaGAACCCTGCCATACAGAAC +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDPAQEI*NPAIQN
Trigger: GTTCTGTATGGCAGGGTTGCAGATTTCTTGAGCTGG...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp ATCACCTGTATCCACAATTCTAGTATCATGCAGAGTATTTTCACCACCCTAAATCCAGGACTTTCATGCTaGCTTCCCCGCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: ITCIHNSSIMQSIFTTLNPGLSC*LPRRIP
Trigger: TGGAATCCTGCGGGGAAGGCAGCATGAAAGTCCTGG...ATTTAGGGTGGTGAAAATACTCTGCATGATACTAGAATTGTGGATACAGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGATGCAGTGTCCGTGCTaGTGGAGATATAGGAAAATA +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQMQCPC*WRYRKI
Trigger: TATTTTCCTATATCTCCAGCAGCACGGACACTGCAT...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATAGCATGCAGTGTCCGTaGTGCTGGAGATATAGGAAA +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDSMQCP*CWRYRK
Trigger: TTTCCTATATCTCCAGCAGCACGGACACTGCATGCT...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGCTATCCTTGGAATACTaGATGGATGCCCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQLSLEY*MDALFQ
Trigger: TTGGAAAAGGGCATCCATCCAGTATTCCAAGGATAG...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp ATAATCACCTGTATCCACAATTCTAGTATCATGCAGAGTATTTTCACCACCCTATCAGGATGGGTGCTGTaGTCCACGCACTGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: IITCIHNSSIMQSIFTTLSGWVL*STHCKS
Trigger: GCTCTTACAGTGCGTGGACCACAGCACCCATCCTGA...TAGGGTGGTGAAAATACTCTGCATGATACTAGAATTGTGGATACAGGTGATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp GTACCTTCTGTAGGTTTGGACACATATATAATCACCTGTATCCACAATTCTAGTTCAGGATGGGTGCTGTaGTCCACGCACTGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: VPSVGLDTYIITCIHNSSSGWVL*STHCKS
Trigger: GCTCTTACAGTGCGTGGACCACAGCACCCATCCTGA...ACTAGAATTGTGGATACAGGTGATTATATATGTGTCCAAACCTACAGAAGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp TCTAGTATCATGCAGAGTATTTTCACCACCCTAAATATTTGGGAGTCCATTTTAAAGGCACAGTCAGGATaGGTGCTGTGGTCCACGCAC +
Preference number: 4 (lower is better)
Translates to: SSIMQSIFTTLNIWESILKAQSG*VLWSTH
Trigger: GTGCGTGGACCACAGCACCCATCCTGACTGTGCCTT...TAAAATGGACTCCCAAATATTTAGGGTGGTGAAAATACTCTGCATGATACTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATAAAATTAGCTGGACATaGTGGCAGGCACCTGCAATC +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDKISWT*WQAPAI
Trigger: GATTGCAGGTGCCTGCCACCATGTCCAGCTAATTTT...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp TTTCACCACCCTAAATATTTGGGAGTCCATTTTATCCTGTTTCCTCTGAAGCTTTCCCCACCAGAGTGGTaGAGTGGTGCATTTGTCACA +
Preference number: 4 (lower is better)
Translates to: FHHPKYLGVHFILFPLKLSPPEW*SGAFVT
Trigger: TGTGACAAATGCACCACTCCACCACTCTGGTGGGGA...AAGCTTCAGAGGAAACAGGATAAAATGGACTCCCAAATATTTAGGGTGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR GCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATAGAAATCTGCAACCCTaGCATACAGAACATCGCTCA +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDRNLQP*HTEHRS
Trigger: TGAGCGATGTTCTGTATGGCAGGGTTGCAGATTTCT...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATGGTCCCCCAATTTCATaGATAACCCAGATCTCGATT +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDGPPIS*ITQISI
Trigger: AATCGAGATCTGGGTTATGCATGAAATTGGGGGACC...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATACACAGGTGGTTCTCTaGTGTTTCTTATTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDTQVVL*CFLFAA
Trigger: AGCGGCAAATAAGAAACAGCAGAGAACCACCTGTGT...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382346.7
CDS-3UTR GCA 90 bp GCAAATTTGAGCAGAAAGTACAGAGCTTCCCACATACGCTCTGTCCCCACACATACAATTCTAGTATCATaGAGAGTATTTTCACCACCC +
Preference number: 4 (lower is better)
Translates to: ANLSRKYRASHIRSVPTHTILVS*RVFSPP
Trigger: GGGTGGTGAAAATACTCTGCATGATACTAGAATTGT...ATGTGTGGGGACAGAGCGTATGTGGGAAGCTCTGTACTTTCTGCTCAAATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATCCTTGGAATACTGGATaGATGCCCTTTTCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDPWNTG*MPFSKR
Trigger: CCTTTTGGAAAAGGGCATCCATCCAGTATTCCAAGG...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATTTAATACAGCTGTACTaGAACCCCATGTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDLIQLY*NPMSFS
Trigger: GCTGAAGGACATGGGGTTCCAGTACAGCTGTATTAA...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp AGTGGTGCATTTGTCACAACTAATGAACCGACATTGAAACATCATGGTCACCCATCCTTGCTGTGGGAGTaGAAGGCATTTACATCTTTG +
Preference number: 4 (lower is better)
Translates to: SGAFVTTNEPTLKHHGHPSLLWE*KAFTSL
Trigger: CAAAGATGTAAATGCCTTCCACTCCCACAGCAAGGA...TGGGTGACCATGATGTTTCAATGTCGGTTCATTAGTTGTGACAAATGCACCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp AGTATCATGCAGAGTATTTTCACCACCCTAAATATTTGGGAGTCCATTTTATCCTCATGTGGACGGAGCTaGACTAGGCAGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: SIMQSIFTTLNIWESILSSCGRS*TRQACN
Trigger: ATTGCATGCCTGCCTAGTCCAGCTCCGTCCACATGA...GGATAAAATGGACTCCCAAATATTTAGGGTGGTGAAAATACTCTGCATGATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp ACAACTAATGAACCGACATTGAAACATCATGGTCACCCAGCCTCTGTAGTTTACGACATTGAAACATCATaGTCACCCAGCCTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: TTNEPTLKHHGHPASVVYDIETS*SPSLCS
Trigger: ACTACAGAGGCTGGGTGACCATGATGTTTCAATGTC...GTAAACTACAGAGGCTGGGTGACCATGATGTTTCAATGTCGGTTCATTAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR TCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATATTTTCACAGTCTTCTaGTGTAGGGCAGGATTGGTA +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDIFTVF*CRAGLV
Trigger: TACCAATCCTGCCCTACATCAGAAGACTGTGAAAAT...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR TCA 90 bp AGTGGTGCATTTGTCACAACTAATGAACCGACATTGAAACATCATGGTCACCCAATTTTCACAGTCTTCTaGTGTAGGGCAGGATTGGTA +
Preference number: 4 (lower is better)
Translates to: SGAFVTTNEPTLKHHGHPIFTVF*CRAGLV
Trigger: TACCAATCCTGCCCTACATCAGAAGACTGTGAAAAT...TGGGTGACCATGATGTTTCAATGTCGGTTCATTAGTTGTGACAAATGCACCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGTCTCTGGGAATAGAGTaGCTGGACAAGTTAATAAAA +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQSLGIE*LDKLIK
Trigger: TTTTATTAACTTGTCCAGGCACTCTATTCCCAGAGA...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGCAGTCTGACTCCCAATaGTTTGTGTCATTATACAAA +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQQSDSQ*FVSLYK
Trigger: TTTGTATAATGACACAAAGCATTGGGAGTCAGACTG...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR GCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATATGCAGTGTCCGTGCTaGTGGAGATATAGGAAAATA +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDMQCPC*WRYRKI
Trigger: TATTTTCCTATATCTCCAGCAGCACGGACACTGCAT...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATCTATCCTTGGAATACTaGATGGATGCCCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDLSLEY*MDALFQ
Trigger: TTGGAAAAGGGCATCCATCCAGTATTCCAAGGATAG...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGTTCTGTATAAAGACTTaGGGCTTTTCTTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQFCIKT*GFSLSS
Trigger: GCTACTCAAAGAAAAGCCCCAAGTCTTTATACAGAA...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp GTTTACCTGAGGGTTCACCCTTGGTGTTGTACCTTCTGTAGGTTTGGACACATAACCACCCTAAATATTTaGGAGTCCATTTTATCCTGT +
Preference number: 4 (lower is better)
Translates to: VYLRVHPWCCTFCRFGHITTLNI*ESILSC
Trigger: ACAGGATAAAATGGACTCCCAAATATTTAGGGTGGT...TATGTGTCCAAACCTACAGAAGGTACAACACCAAGGGTGAACCCTCAGGTAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR GCA 90 bp TCTAGTATCATGCAGAGTATTTTCACCACCCTAAATATTTGGGAGTCCATTTTATTTCCAGGACTTTCATaGTGCCTTCCCCGCAGGATT +
Preference number: 4 (lower is better)
Translates to: SSIMQSIFTTLNIWESILFPGLS*CLPRRI
Trigger: AATCCTGCGGGGAAGGCAGCATGAAAGTCCTGGAAA...TAAAATGGACTCCCAAATATTTAGGGTGGTGAAAATACTCTGCATGATACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR TCA 90 bp CCTTCTGTAGGTTTGGACACATATATAATCACCTGTATCCACAATTCTAGTATCTTATCCTGTTTCCTCTaGAGCTTGTGGAGAGCATTC +
Preference number: 4 (lower is better)
Translates to: PSVGLDTYIITCIHNSSILSCFL*SLWRAF
Trigger: GAATGCTCTCCACAAGCTTCAGAGGAAACAGGATAA...GATACTAGAATTGTGGATACAGGTGATTATATATGTGTCCAAACCTACAGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATTTCTGTATAAAGACTTaGGGCTTTTCTTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDFCIKT*GFSLSS
Trigger: GCTACTCAAAGAAAAGCCCCAAGTCTTTATACAGAA...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CCA 90 bp CCTTCTGTAGGTTTGGACACATATATAATCACCTGTATCCACAATTCTAGTATCTCCTTGCTGTGGGAGTaGAAGGCATTTACATCTTTG +
Preference number: 4 (lower is better)
Translates to: PSVGLDTYIITCIHNSSISLLWE*KAFTSL
Trigger: CAAAGATGTAAATGCCTTCCACTCCCACAGCAAGGA...GATACTAGAATTGTGGATACAGGTGATTATATATGTGTCCAAACCTACAGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp AGTGGTGCATTTGTCACAACTAATGAACCGACATTGAAACATCATGGTCACCCAACCACCCTAAATATTTaGGAGTCCATTTTATCCTGT +
Preference number: 4 (lower is better)
Translates to: SGAFVTTNEPTLKHHGHPTTLNI*ESILSC
Trigger: ACAGGATAAAATGGACTCCCAAATATTTAGGGTGGT...TGGGTGACCATGATGTTTCAATGTCGGTTCATTAGTTGTGACAAATGCACCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CCA 90 bp GTACCTTCTGTAGGTTTGGACACATATATAATCACCTGTATCCACAATTCTAGTCTATCCTTGGAATACTaGATGGATGCCCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: VPSVGLDTYIITCIHNSSLSLEY*MDALFQ
Trigger: TTGGAAAAGGGCATCCATCCAGTATTCCAAGGATAG...ACTAGAATTGTGGATACAGGTGATTATATATGTGTCCAAACCTACAGAAGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR GCA 90 bp CCTTCTGTAGGTTTGGACACATATATAATCACCTGTATCCACAATTCTAGTATCACAATTCTAGTATCATaGAGAGTATTTTCACCACCC +
Preference number: 4 (lower is better)
Translates to: PSVGLDTYIITCIHNSSITILVS*RVFSPP
Trigger: GGGTGGTGAAAATACTCTGCATGATACTAGAATTGT...GATACTAGAATTGTGGATACAGGTGATTATATATGTGTCCAAACCTACAGAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS GCA 90 bp ACTCGGCGCAGCGGCCCAGGAAGATGTCCCGCAAGTGTGCGCTGGTaGCCTCCCCGCGCCACCGCGCGCGCGCCCCGCCCGCCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: TRRSGPGRCPASVRW*PPRATARAPRPPPA
Trigger: TGCTGGCGGCGGGCGGGGCGCGCGCGCGGTGGCGCGGGGAGGGCACCAGCGCACACTTGCGGGACATCTTCCTGGGCCGCTGCGCCGAGT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS GCA 90 bp TGCGCGGTACTCGGCGCAGCGGCCCAGGAAGATGTCCCGCAAGTGTaGGCTGGTGCCCTCCCCGCGCCACCGCGCGCGCGCCCCGCCCGC +
Preference number: 5 (lower is better)
Translates to: CAVLGAAAQEDVPQV*AGALPAPPRARPAR
Trigger: GCGGGCGGGGCGCGCGCGCGGTGGCGCGGGGAGGGCACCAGCGCACACTTGCGGGACATCTTCCTGGGCCGCTGCGCCGAGTACCGCGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS CCA 90 bp GGTACTCGGCGCAGCGGCCCAGGAAGATGTCCCGCAAGTGTGCGCTaGTGCCCTCCCCGCGCCACCGCGCGCGCGCCCCGCCCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: GTRRSGPGRCPASVR*CPPRATARAPRPPP
Trigger: TGGCGGCGGGCGGGGCGCGCGCGCGGTGGCGCGGGGAGGGCACCAGCGCACACTTGCGGGACATCTTCCTGGGCCGCTGCGCCGAGTACC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS CCA 90 bp CCCGCCGCCAGCAGCAACAGTAGAAGCAGAAGCTGCAGCAGCAGCTaGAGCAGCCGCGATGCCGCGCACCCCTGGGCCGCCATCGGGGAA +
Preference number: 5 (lower is better)
Translates to: PAASSNSRSRSCSSS*SSRDAAHPWAAIGE
Trigger: TTCCCCGATGGCGGCCCAGGGGTGCGCGGCATCGCGGCTGCTCCAGCTGCTGCTGCAGCTTCTGCTTCTACTGTTGCTGCTGGCGGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CAA 90 bp CCCCCACTGGCAGCATCCCCACCAGAGTGGTGGAGTGGTGCATTTGTCACAACTCCGCAGGATTCCACATaGGGTCCCCCAATTTCATGC +
Preference number: 5 (lower is better)
Translates to: PPLAASPPEWWSGAFVTTPQDST*GPPISC
Trigger: GCATGAAATTGGGGGACCCAATGTGGAATCCTGCGG...AGTTGTGACAAATGCACCACTCCACCACTCTGGTGGGGATGCTGCCAGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CAA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGCGCCATCGGGGAACTTaGGTCCCTCCAGTCCCGTGC +
Preference number: 5 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQRHRGT*VPPVPC
Trigger: GCACGGGACTGGAGGGACCAAAGTTCCCCGATGGCG...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS GCA 90 bp AACACGGTGAAACCCCGTCTGACTTTAAGGCACAGTCAGGATGGGTaGTGTGGTCCACGCACTGTAAGAGCTTCACTGGTCGGTAATCAT +
Preference number: 5 (lower is better)
Translates to: NTVKPRLTLRHSQDG*CGPRTVRASLVGNH
Trigger: ATGATTACCGACCAGTGAAGCTCTTACAGTGCGTGGACCACAGCACCCATCCTGACTGTGCCTTAAAGTCAGACGGGGTTTCACCGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505785.5
CDS GCA 90 bp TCCCACATAGCCTCTTGGGTGACTTTAAGGCACAGTCAGGATGGGTaGTGTGGTCCACGCACTGTAAGAGCTTCACTGGTCGGTAATCAT +
Preference number: 5 (lower is better)
Translates to: SHIASWVTLRHSQDG*CGPRTVRASLVGNH
Trigger: ATGATTACCGACCAGTGAAGCTCTTACAGTGCGTGGACCACAGCACCCATCCTGACTGTGCCTTAAAGTCACCCAAGAGGCTATGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR CAA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATCGCCATCGGGGAACTTaGGTCCCTCCAGTCCCGTGC +
Preference number: 5 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDRHRGT*VPPVPC
Trigger: GCACGGGACTGGAGGGACCAAAGTTCCCCGATGGCG...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CAA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGATGGCTGTGCAGTTCTaGTTCCGCTGCTCGGGACTC +
Preference number: 5 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQMAVQF*FRCSGL
Trigger: GAGTCCCGAGCAGCGGAACAAGAACTGCACAGCCAT...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265016.9
CDS-3UTR CAA 90 bp ACCGACATTGAAACATCATGGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTCAGAGATTTCGGCTTCCTaGCTGTGGGAGTGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: TDIETSWSPSLCSLPEGSEISAS*LWEWKA
Trigger: TGCCTTCCACTCCCACAGCAAGGAAGCCGAAATCTC...TGAACCCTCAGGTAAACTACAGAGGCTGGGTGACCATGATGTTTCAATGTCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CAA 90 bp GGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTCACCCTTGGTGTTGTACCTTCCAATTGACTCAACTCTaGCCAGAGCCTCTGGAGATT +
Preference number: 5 (lower is better)
Translates to: GHPASVVYLRVHPWCCTFQLTQL*PEPLEI
Trigger: AATCTCCAGAGGCTCTGGCAAGAGTTGAGTCAATTG...GAAGGTACAACACCAAGGGTGAACCCTCAGGTAAACTACAGAGGCTGGGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS GCA 90 bp ATCATGGTTCCCACAGTTTCGACTTTAAGGCACAGTCAGGATGGGTaGTGTGGTCCACGCACTGTAAGAGCTTCACTGGTCGGTAATCAT +
Preference number: 5 (lower is better)
Translates to: IMVPTVSTLRHSQDG*CGPRTVRASLVGNH
Trigger: ATGATTACCGACCAGTGAAGCTCTTACAGTGCGTGGACCACAGCACCCATCCTGACTGTGCCTTAAAGTCGAAACTGTGGGAACCATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514989.1
CDS CCA 90 bp TTTCCTTGTACAAAGGCTAGAACCGGCGGTTGTATGGTTCTGCTCTaGGTCGCACTCCTAATGTCCCACATAGCCTCTTGGGTGACTTTA +
Preference number: 5 (lower is better)
Translates to: FPCTKARTGGCMVLL*VALLMSHIASWVTL
Trigger: TAAAGTCACCCAAGAGGCTATGTGGGACATTAGGAGTGCGACCCAGAGCAGAACCATACAACCGCCGGTTCTAGCCTTTGTACAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR CAA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGACGGAGCAGGGATCCTaGTCCAGCGCCACTTTAAAG +
Preference number: 5 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQTEQGS*SSATLK
Trigger: CTTTAAAGTGGCGCTGGACAAGGATCCCTGCTCCGT...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CAA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGCCGCAGGATTCCACATaGGGTCCCCCAATTTCATGC +
Preference number: 5 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQPQDST*GPPISC
Trigger: GCATGAAATTGGGGGACCCAATGTGGAATCCTGCGG...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CAA 90 bp TCTGAAGCTTGTGGAGAGCATTCATGTGGACGGAGCTGGACTAGGCAGGCATGCAAGGCATTTACATCTTaGGACTCTCTGACAGTCAGT +
Preference number: 5 (lower is better)
Translates to: SEACGEHSCGRSWTRQACKAFTS*DSLTVS
Trigger: ACTGACTGTCAGAGAGTCCAAAGATGTAAATGCCTT...GCATGCCTGCCTAGTCCAGCTCCGTCCACATGAATGCTCTCCACAAGCTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CAA 90 bp TCTGAAGCTTGTGGAGAGCATTCATGTGGACGGAGCTGGACTAGGCAGGCATGCAGGTTCACAGCAAATTaGAGCAGAAAGTACAGAGCT +
Preference number: 5 (lower is better)
Translates to: SEACGEHSCGRSWTRQACRFTAN*SRKYRA
Trigger: AGCTCTGTACTTTCTGCTCAAATTTGCTGTGAACCT...GCATGCCTGCCTAGTCCAGCTCCGTCCACATGAATGCTCTCCACAAGCTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS TCA 90 bp TCTGGGAATAGAGTGCCTGGACAAGTTAATAAAAAGGTCATAGTCTaGGGGCAGCACGGAGCAGGGATCCTTGTCCAGCGCCACTTTAAA +
Preference number: 5 (lower is better)
Translates to: SGNRVPGQVNKKVIV*GQHGAGILVQRHFK
Trigger: TTTAAAGTGGCGCTGGACAAGGATCCCTGCTCCGTGCTGCCCTCAGACTATGACCTTTTTATTAACTTGTCCAGGCACTCTATTCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CAA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGTGGGATAGGCTCCTGTaGGCTCTGAACCATTCAGCA +
Preference number: 5 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQWDRLL*ALNHSA
Trigger: TGCTGAATGGTTCAGAGCCAACAGGAGCCTATCCCA...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CAA 90 bp GTTTACCTGAGGGTTCACCCTTGGTGTTGTACCTTCTGTAGGTTTGGACACATATGGGATAGGCTCCTGTaGGCTCTGAACCATTCAGCA +
Preference number: 5 (lower is better)
Translates to: VYLRVHPWCCTFCRFGHIWDRLL*ALNHSA
Trigger: TGCTGAATGGTTCAGAGCCAACAGGAGCCTATCCCA...TATGTGTCCAAACCTACAGAAGGTACAACACCAAGGGTGAACCCTCAGGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS TCA 90 bp CTTCCTTGCTGTGGGAGTGGAAGGCATTTACATCTTTGGACTCTCTaGCAGTCAGTATCTTCCCCATCATGGTTCCCACAGTTTCGACTT +
Preference number: 5 (lower is better)
Translates to: LPCCGSGRHLHLWTL*QSVSSPSWFPQFRL
Trigger: AAGTCGAAACTGTGGGAACCATGATGGGGAAGATACTGACTGTCAGAGAGTCCAAAGATGTAAATGCCTTCCACTCCCACAGCAAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514989.1
CDS CCA 90 bp GGCATAAAACGACGGGTGTTGTCTGCAAAGCTGTTAACAAGGAGGTaGCTATTTTCCCAGAACAGGGACTTATCTCTGGGAATAGAGTGC +
Preference number: 5 (lower is better)
Translates to: GIKRRVLSAKLLTRR*LFSQNRDLSLGIEC
Trigger: GCACTCTATTCCCAGAGATAAGTCCCTGTTCTGGGAAAATAGCCACCTCCTTGTTAACAGCTTTGCAGACAACACCCGTCGTTTTATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CAA 90 bp GGCATTTACATCTTTGGACTCTCTGACAGTCAGTATCTTCCCCATCATGGTTCCACCCCAGAACTATCCTaGGAATACTGGATGGATGCC +
Preference number: 5 (lower is better)
Translates to: GIYIFGLSDSQYLPHHGSTPELS*EYWMDA
Trigger: GGCATCCATCCAGTATTCCAAGGATAGTTCTGGGGT...GGAACCATGATGGGGAAGATACTGACTGTCAGAGAGTCCAAAGATGTAAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS-3UTR CAA 90 bp TGGTGGAGTGGTGCATTTGTCACAACTAATGAACCGACATTGAAACATCATGGTCCGCAGGATTCCACATaGGGTCCCCCAATTTCATGC +
Preference number: 5 (lower is better)
Translates to: WWSGAFVTTNEPTLKHHGPQDST*GPPISC
Trigger: GCATGAAATTGGGGGACCCAATGTGGAATCCTGCGG...ACCATGATGTTTCAATGTCGGTTCATTAGTTGTGACAAATGCACCACTCCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CAA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATACTTGGGGCTTTTCTTaGAGTAGCGGCTGCTGCCGA +
Preference number: 5 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDTWGFS*SSGCCR
Trigger: TCGGCAGCAGCCGCTACTCAAAGAAAAGCCCCAAGT...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CAA 90 bp ACAACTAATGAACCGACATTGAAACATCATGGTCACCCAGCCTCTGTAGTTTACGAGATTTCGGCTTCCTaGCTGTGGGAGTGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: TTNEPTLKHHGHPASVVYEISAS*LWEWKA
Trigger: TGCCTTCCACTCCCACAGCAAGGAAGCCGAAATCTC...GTAAACTACAGAGGCTGGGTGACCATGATGTTTCAATGTCGGTTCATTAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CAA 90 bp ACATCATGGTCACCCAGCCTCTGTAGTTTACCTGAGGGTTCACCCTTGGTGTTGAGGTTCACAGCAAATTaGAGCAGAAAGTACAGAGCT +
Preference number: 5 (lower is better)
Translates to: TSWSPSLCSLPEGSPLVLRFTAN*SRKYRA
Trigger: AGCTCTGTACTTTCTGCTCAAATTTGCTGTGAACCT...CAACACCAAGGGTGAACCCTCAGGTAAACTACAGAGGCTGGGTGACCATGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CAA 90 bp GTTTACCTGAGGGTTCACCCTTGGTGTTGTACCTTCTGTAGGTTTGGACACATACAATTGACTCAACTCTaGCCAGAGCCTCTGGAGATT +
Preference number: 5 (lower is better)
Translates to: VYLRVHPWCCTFCRFGHIQLTQL*PEPLEI
Trigger: AATCTCCAGAGGCTCTGGCAAGAGTTGAGTCAATTG...TATGTGTCCAAACCTACAGAAGGTACAACACCAAGGGTGAACCCTCAGGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CAA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATACCCCAGAACTATCCTaGGAATACTGGATGGATGCC +
Preference number: 5 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDTPELS*EYWMDA
Trigger: GGCATCCATCCAGTATTCCAAGGATAGTTCTGGGGT...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CAA 90 bp AGAATCATTTGGTATACACAGAACACGAATGATGACTGCAAGGGGAGGCTGCAGATAAAACGACGGGTGTaGTCTGCAAAGCTGTTAACA +
Preference number: 5 (lower is better)
Translates to: RIIWYTQNTNDDCKGRLQIKRRV*SAKLLT
Trigger: TGTTAACAGCTTTGCAGACAACACCCGTCGTTTTAT...CTGCAGCCTCCCCTTGCAGTCATCATTCGTGTTCTGTGTATACCAAATGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CAA 90 bp AATTTGAGCAGAAAGTACAGAGCTTCCCACATACGCTCTGTCCCCACACATACACACCACCCTAAATATTaGGGAGTCCATTTTATCCTG +
Preference number: 5 (lower is better)
Translates to: NLSRKYRASHIRSVPTHTHHPKY*GVHFIL
Trigger: CAGGATAAAATGGACTCCCAAATATTTAGGGTGGTG...TGTATGTGTGGGGACAGAGCGTATGTGGGAAGCTCTGTACTTTCTGCTCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS-3UTR CAA 90 bp TATACATATGTCTTAAGCAATCAACAAGCATGCAGTGTCCGTGCTGCTGGAGATGATAAGACCCGCCCTTaGTTCTGTATAAAGACTTGG +
Preference number: 5 (lower is better)
Translates to: YTYVLSNQQACSVRAAGDDKTRP*FCIKTW
Trigger: CCAAGTCTTTATACAGAACAAAGGGCGGGTCTTATC...ATCTCCAGCAGCACGGACACTGCATGCTTGTTGATTGCTTAAGACATATGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS-3UTR CAA 90 bp ACAACTAATGAACCGACATTGAAACATCATGGTCACCCAGCCTCTGTAGTTTACCACCACCCTAAATATTaGGGAGTCCATTTTATCCTG +
Preference number: 5 (lower is better)
Translates to: TTNEPTLKHHGHPASVVYHHPKY*GVHFIL
Trigger: CAGGATAAAATGGACTCCCAAATATTTAGGGTGGTG...GTAAACTACAGAGGCTGGGTGACCATGATGTTTCAATGTCGGTTCATTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514445.5
ENST00000514989.1
CDS GCA 72 bp AGCGGCCCAGGAAGATGTCCCGCAAGTGTGCGCTGGTaGCCTCCCCGCGCCACCGCGCGCGCGCCCCGCCCG +
Preference number: 6 (lower is better)
Translates to: SGPGRCPASVRW*PPRATARAPRP
Trigger: CGGGCGGGGCGCGCGCGCGGTGGCGCGGGGAGGGCACCAGCGCACACTTGCGGGACATCTTCCTGGGCCGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS GCA 72 bp CTCGGCGCAGCGGCCCAGGAAGATGTCCCGCAAGTGTaGGCTGGTGCCCTCCCCGCGCCACCGCGCGCGCGC +
Preference number: 6 (lower is better)
Translates to: LGAAAQEDVPQV*AGALPAPPRAR
Trigger: GCGCGCGCGCGGTGGCGCGGGGAGGGCACCAGCGCACACTTGCGGGACATCTTCCTGGGCCGCTGCGCCGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS CCA 72 bp AGCAGCAGCTGGAGCAGCCGCGATGCCGCGCACCCCTaGGCCGCCATCGGGGAACTTTGGTCCCTCCAGTCC +
Preference number: 6 (lower is better)
Translates to: SSSWSSRDAAHP*AAIGELWSLQS
Trigger: GGACTGGAGGGACCAAAGTTCCCCGATGGCGGCCCAGGGGTGCGCGGCATCGCGGCTGCTCCAGCTGCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS CCA 72 bp AGCAGCAACAGTAGAAGCAGAAGCTGCAGCAGCAGCTaGAGCAGCCGCGATGCCGCGCACCCCTGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: SSNSRSRSCSSS*SSRDAAHPWAA
Trigger: GGCGGCCCAGGGGTGCGCGGCATCGCGGCTGCTCCAGCTGCTGCTGCAGCTTCTGCTTCTACTGTTGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS GCA 72 bp TGTGCAGTTCTTGTTCCGCTGCTCGGGACTCAGCAGTaGGCGGTACTCGGCGCAGCGGCCCAGGAAGATGTC +
Preference number: 6 (lower is better)
Translates to: CAVLVPLLGTQQ*AVLGAAAQEDV
Trigger: GACATCTTCCTGGGCCGCTGCGCCGAGTACCGCGCACTGCTGAGTCCCGAGCAGCGGAACAAGAACTGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265016.9
CDS GCA 72 bp GCTGTTTCTTATTTGCCGCTGCTCGGGACTCAGCAGTaGGCGGTACTCGGCGCAGCGGCCCAGGAAGATGTC +
Preference number: 6 (lower is better)
Translates to: AVSYLPLLGTQQ*AVLGAAAQEDV
Trigger: GACATCTTCCTGGGCCGCTGCGCCGAGTACCGCGCACTGCTGAGTCCCGAGCAGCGGCAAATAAGAAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382346.7
CDS GCA 72 bp CGGCTGCTGCCGACTTTAAGGCACAGTCAGGATGGGTaGTGTGGTCCACGCACTGTAAGAGCTTCACTGGTC +
Preference number: 6 (lower is better)
Translates to: RLLPTLRHSQDG*CGPRTVRASLV
Trigger: GACCAGTGAAGCTCTTACAGTGCGTGGACCACAGCACCCATCCTGACTGTGCCTTAAAGTCGGCAGCAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS CCA 72 bp GTAGCGGCTGCTGCCGACTTTAAGGCACAGTCAGGATaGGTGCTGTGGTCCACGCACTGTAAGAGCTTCACT +
Preference number: 6 (lower is better)
Translates to: VAAAADFKAQSG*VLWSTHCKSFT
Trigger: AGTGAAGCTCTTACAGTGCGTGGACCACAGCACCCATCCTGACTGTGCCTTAAAGTCGGCAGCAGCCGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS GCA 72 bp GCCTCTTGGGTGACTTTAAGGCACAGTCAGGATGGGTaGTGTGGTCCACGCACTGTAAGAGCTTCACTGGTC +
Preference number: 6 (lower is better)
Translates to: ASWVTLRHSQDG*CGPRTVRASLV
Trigger: GACCAGTGAAGCTCTTACAGTGCGTGGACCACAGCACCCATCCTGACTGTGCCTTAAAGTCACCCAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS GCA 72 bp AAACCCCGTCTGACTTTAAGGCACAGTCAGGATGGGTaGTGTGGTCCACGCACTGTAAGAGCTTCACTGGTC +
Preference number: 6 (lower is better)
Translates to: KPRLTLRHSQDG*CGPRTVRASLV
Trigger: GACCAGTGAAGCTCTTACAGTGCGTGGACCACAGCACCCATCCTGACTGTGCCTTAAAGTCAGACGGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505785.5
CDS GCA 72 bp CCCACAGTTTCGACTTTAAGGCACAGTCAGGATGGGTaGTGTGGTCCACGCACTGTAAGAGCTTCACTGGTC +
Preference number: 6 (lower is better)
Translates to: PTVSTLRHSQDG*CGPRTVRASLV
Trigger: GACCAGTGAAGCTCTTACAGTGCGTGGACCACAGCACCCATCCTGACTGTGCCTTAAAGTCGAAACTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514989.1
CDS CCA 72 bp ACAAAGGCTAGAACCGGCGGTTGTATGGTTCTGCTCTaGGTCGCACTCCTAATGTCCCACATAGCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: TKARTGGCMVLL*VALLMSHIASW
Trigger: CCAAGAGGCTATGTGGGACATTAGGAGTGCGACCCAGAGCAGAACCATACAACCGCCGGTTCTAGCCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS TCA 72 bp AGAGTGCCTGGACAAGTTAATAAAAAGGTCATAGTCTaGGGGCAGCACGGAGCAGGGATCCTTGTCCAGCGC +
Preference number: 6 (lower is better)
Translates to: RVPGQVNKKVIV*GQHGAGILVQR
Trigger: GCGCTGGACAAGGATCCCTGCTCCGTGCTGCCCTCAGACTATGACCTTTTTATTAACTTGTCCAGGCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS CCA 72 bp CATAGCCTCTTGGGTGACTTTAAGGCACAGTCAGGATaGGTGCTGTGGTCCACGCACTGTAAGAGCTTCACT +
Preference number: 6 (lower is better)
Translates to: HSLLGDFKAQSG*VLWSTHCKSFT
Trigger: AGTGAAGCTCTTACAGTGCGTGGACCACAGCACCCATCCTGACTGTGCCTTAAAGTCACCCAAGAGGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514445.5
CDS CCA 72 bp GGTTCCCACAGTTTCGACTTTAAGGCACAGTCAGGATaGGTGCTGTGGTCCACGCACTGTAAGAGCTTCACT +
Preference number: 6 (lower is better)
Translates to: GSHSFDFKAQSG*VLWSTHCKSFT
Trigger: AGTGAAGCTCTTACAGTGCGTGGACCACAGCACCCATCCTGACTGTGCCTTAAAGTCGAAACTGTGGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514989.1
CDS CAA 90 bp TGCAGGGCTGGAGGAGGGTTAGAGCAACACAGTTTCCAGTTACAGTaGAGTCCTGGAAGCCAGCACCAGAAAGAGGGGAATGATAAGACC +
Preference number: 6 (lower is better)
Translates to: CRAGGGLEQHSFQLQ*SPGSQHQKEGNDKT
Trigger: GGTCTTATCATTCCCCTCTTTCTGGTGCTGGCTTCCAGGACTCAACTGTAACTGGAAACTGTGTTGCTCTAACCCTCCTCCAGCCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS GCA 72 bp TCTTGTTCTGGGTGGTGTGTAACACAGGTGGTTCTCTaGTGTTTCTTATTTGCCGCTGCTCGGGACTCAGCA +
Preference number: 6 (lower is better)
Translates to: SCSGWCVTQVVL*CFLFAAARDSA
Trigger: TGCTGAGTCCCGAGCAGCGGCAAATAAGAAACAGCAGAGAACCACCTGTGTTACACACCACCCAGAACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382346.7
CDS TCA 72 bp TGGGATAGGCTCCTGTTGGCTCTGAACCATTCAGCATaGCGTGGATCACCCCAGAACTATCCTTGGAATACT +
Preference number: 6 (lower is better)
Translates to: WDRLLLALNHSA*RGSPQNYPWNT
Trigger: AGTATTCCAAGGATAGTTCTGGGGTGATCCACGTCATGCTGAATGGTTCAGAGCCAACAGGAGCCTATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265016.9
ENST00000382346.7
ENST00000505785.5
ENST00000514445.5
CDS CCA 72 bp CGACGGGTGTTGTCTGCAAAGCTGTTAACAAGGAGGTaGCTATTTTCCCAGAACAGGGACTTATCTCTGGGA +
Preference number: 6 (lower is better)
Translates to: RRVLSAKLLTRR*LFSQNRDLSLG
Trigger: TCCCAGAGATAAGTCCCTGTTCTGGGAAAATAGCCACCTCCTTGTTAACAGCTTTGCAGACAACACCCGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS GCA 72 bp AGAGTCATTTTTCTGTCGACACCAGCTCAAGAAATCTaGAACCCTGCCATACAGAACATCGCTCAGGGGCAT +
Preference number: 6 (lower is better)
Translates to: RVIFLSTPAQEI*NPAIQNIAQGH
Trigger: ATGCCCCTGAGCGATGTTCTGTATGGCAGGGTTGCAGATTTCTTGAGCTGGTGTCGACAGAAAAATGACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265016.9
ENST00000382346.7
ENST00000505785.5
CDS CCA 72 bp AATGATAAGACCCGCCCTTTGTTCTGTATAAAGACTTaGGGCTTTTCTTTGAGTAGCGGCTGCTGCCGACTT +
Preference number: 6 (lower is better)
Translates to: NDKTRPLFCIKT*GFSLSSGCCRL
Trigger: AAGTCGGCAGCAGCCGCTACTCAAAGAAAAGCCCCAAGTCTTTATACAGAACAAAGGGCGGGTCTTATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265016.9
ENST00000382346.7
CDS CAA 72 bp TACAGAACATCGCTCAGGGGCATAAAACGACGGGTGTaGTCTGCAAAGCTGTTAACAAGGAGGTGGCTATTT +
Preference number: 6 (lower is better)
Translates to: YRTSLRGIKRRV*SAKLLTRRWLF
Trigger: AAATAGCCACCTCCTTGTTAACAGCTTTGCAGACAACACCCGTCGTTTTATGCCCCTGAGCGATGTTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265016.9
ENST00000382346.7
ENST00000505785.5