Pregenerated sensors for BSPH1 (Homo sapiens)
Ensembl gene IDs: ENSG00000188334Ensembl transcript IDs: ENST00000344839.3
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGGTTACTGTATATCAGACCATTCTGACCTGCTGAAGAATCCATaGCTTTCAGGAAGAAGATTATTACTGCTGGATGCATCGATCATG | + |
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Preference number: 1 (lower is better) Translates to: GGYCISDHSDLLKNP*LSGRRLLLLDASIM Trigger: CATGATCGATGCATCCAGCAGTAATAATCTTCTTCCTGAAAGCCATGGATTCTTCAGCAGGTCAGAATGGTCTGATATACAGTAACCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| 3UTR GCA 90 bp | GCTGAAGAATCCATGGCTTTCAGGAAGAAGATTATTACTGCTGGATaGATCGATCATGTTTTGTCTGTATCTGATAGCCAGCAGATGCAA | + |
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Preference number: 1 (lower is better) Translates to: AEESMAFRKKIITAG*IDHVLSVSDSQQMQ Trigger: TTGCATCTGCTGGCTATCAGATACAGACAAAACATGATCGATGCATCCAGCAGTAATAATCTTCTTCCTGAAAGCCATGGATTCTTCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| 3UTR TCA 90 bp | TTAAGAAAATTGGGGGTTACTGTATATCAGACCATTCTGACCTGCTaGAGAATCCATGGCTTTCAGGAAGAAGATTATTACTGCTGGATG | + |
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Preference number: 1 (lower is better) Translates to: LRKLGVTVYQTILTC*RIHGFQEEDYYCWM Trigger: CATCCAGCAGTAATAATCTTCTTCCTGAAAGCCATGGATTCTTCAGCAGGTCAGAATGGTCTGATATACAGTAACCCCCAATTTTCTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| 3UTR GCA 72 bp | TCCATGGCTTTCAGGAAGAAGATTATTACTGCTGGATaGATCGATCATGTTTTGTCTGTATCTGATAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: SMAFRKKIITAG*IDHVLSVSDSQ Trigger: CTGGCTATCAGATACAGACAAAACATGATCGATGCATCCAGCAGTAATAATCTTCTTCCTGAAAGCCATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR CCA 90 bp | TACTGTATATCAGACCATTCTGACCTGCTGAAGAATCCATGGCTTTCAGGAAGAGCATCAGGGAGCCCATaGGCAGTCACAGGCTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: YCISDHSDLLKNPWLSGRASGSP*AVTGFP Trigger: CGGGAAGCCTGTGACTGCCCATGGGCTCCCTGATGC...TCTTCCTGAAAGCCATGGATTCTTCAGCAGGTCAGAATGGTCTGATATACAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR TCA 90 bp | GATGCATCGATCATGTTTTGTCTGTATCTGATAGCCAGCAGATGCAAGCAAACCACCATTCTGACCTGCTaGAGAATCCATGGCTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: DASIMFCLYLIASRCKQTTILTC*RIHGFQ Trigger: CTGAAAGCCATGGATTCTTCAGCAGGTCAGAATGGT...GGTTTGCTTGCATCTGCTGGCTATCAGATACAGACAAAACATGATCGATGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR TCA 90 bp | ATTATTACTGCTGGATGCATCGATCATGTTTTGTCTGTATCTGATAGCCAGCAGAGGGAAGATGCAAGCTaGGGAATTTCGCGTCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: IITAGCIDHVLSVSDSQQREDAS*GISRRF Trigger: GAAACGACGCGAAATTCCTCAGCTTGCATCTTCCCT...CTGCTGGCTATCAGATACAGACAAAACATGATCGATGCATCCAGCAGTAATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR TCA 90 bp | CTGCTGGATGCATCGATCATGTTTTGTCTGTATCTGATAGCCAGCAGATGCAAGTATATCAGACCATTCTaGCCTGCTGAAGAATCCATG | + |
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Preference number: 4 (lower is better) Translates to: LLDASIMFCLYLIASRCKYIRPF*PAEESM Trigger: CATGGATTCTTCAGCAGGTCAGAATGGTCTGATATA...CTTGCATCTGCTGGCTATCAGATACAGACAAAACATGATCGATGCATCCAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR CCA 90 bp | AAGAAGATTATTACTGCTGGATGCATCGATCATGTTTTGTCTGTATCTGATAGCTATCTCAGATCTTCCTaGTCTTTGTCAGCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: KKIITAGCIDHVLSVSDSYLRSS*SLSARA Trigger: AGCCCTGGCTGACAAAGACCAGGAAGATCTGAGATA...GCTATCAGATACAGACAAAACATGATCGATGCATCCAGCAGTAATAATCTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR GCA 90 bp | TTTCAGGAAGAAGATTATTACTGCTGGATGCATCGATCATGTTTTGTCTGTATCCTGATAGCCAGCAGATaGAAGCAAACCATCATTCAC | + |
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Preference number: 4 (lower is better) Translates to: FQEEDYYCWMHRSCFVCILIASR*KQTIIH Trigger: GTGAATGATGGTTTGCTTGCATCTGCTGGCTATCAG...GATACAGACAAAACATGATCGATGCATCCAGCAGTAATAATCTTCTTCCTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| 3UTR CAA 72 bp | AAGAAGATTATTACTGCTGGATGCATCGATCATGTTTaGTCTGTATCTGATAGCCAGCAGATGCAAGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: KKIITAGCIDHV*SVSDSQQMQAN Trigger: GTTTGCTTGCATCTGCTGGCTATCAGATACAGACAAAACATGATCGATGCATCCAGCAGTAATAATCTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR TCA 90 bp | TTTATTAAGAAAATTGGGGGTTACTGTATATCAGACCATTCTGACCTGCTGAAGGTCTTGCCTTGGACTTaGTGCAGTCATAATATGTTC | + |
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Preference number: 4 (lower is better) Translates to: FIKKIGGYCISDHSDLLKVLPWT*CSHNMF Trigger: GAACATATTATGACTGCATCAAGTCCAAGGCAAGAC...CTTCAGCAGGTCAGAATGGTCTGATATACAGTAACCCCCAATTTTCTTAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR GCA 90 bp | AAGAATCCATGGCTTTCAGGAAGAAGATTATTACTGCTGGATGCATCGATCATGGTTTGCAAAATCTTCTaGACTGCAAAACTTCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: KNPWLSGRRLLLLDASIMVCKIF*TAKLPV Trigger: TACTGGAAGTTTTGCAGTGCAGAAGATTTTGCAAAC...CATGATCGATGCATCCAGCAGTAATAATCTTCTTCCTGAAAGCCATGGATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR GCA 90 bp | CCATGGCTTTCAGGAAGAAGATTATTACTGCTGGATGCATCGATCATGTTTTGTGAAGAAGATTATTACTaGTGGATGCATCGATCATGT | + |
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Preference number: 4 (lower is better) Translates to: PWLSGRRLLLLDASIMFCEEDYY*WMHRSC Trigger: ACATGATCGATGCATCCAGCAGTAATAATCTTCTTC...ACAAAACATGATCGATGCATCCAGCAGTAATAATCTTCTTCCTGAAAGCCATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR CCA 90 bp | ATTATTACTGCTGGATGCATCGATCATGTTTTGTCTGTATCTGATAGCCAGCAGATTTTTATAGTGGAATaGAAAGACACACTCCCCATC | + |
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Preference number: 4 (lower is better) Translates to: IITAGCIDHVLSVSDSQQIFIVE*KDTLPI Trigger: GATGGGGAGTGTGTCTTTCCATTCCACTATAAAAAT...CTGCTGGCTATCAGATACAGACAAAACATGATCGATGCATCCAGCAGTAATAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR GCA 90 bp | ATGGCTTTCAGGAAGAAGATTATTACTGCTGGATGCATCGATCATGTTTTGTCTCAAAATCTTCTGCACTaGAAAACTTCCAGTATCCTT | + |
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Preference number: 4 (lower is better) Translates to: MAFRKKIITAGCIDHVLSQNLLH*KTSSIL Trigger: AAGGATACTGGAAGTTTTGCAGTGCAGAAGATTTTG...AGACAAAACATGATCGATGCATCCAGCAGTAATAATCTTCTTCCTGAAAGCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR GCA 90 bp | ATTAAGAAAATTGGGGGTTACTGTATATCAGACCATTCTGACCTGCTGAAGAATGGGAAATACACAGTTTaGAAAATCTTCTGCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: IKKIGGYCISDHSDLLKNGKYTV*KIFCTA Trigger: TGCAGTGCAGAAGATTTTGCAAACTGTGTATTTCCC...ATTCTTCAGCAGGTCAGAATGGTCTGATATACAGTAACCCCCAATTTTCTTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR CCA 90 bp | AAGAATCCATGGCTTTCAGGAAGAAGATTATTACTGCTGGATGCATCGATCATGCCCATCTGTAACTTCTaGAAAATGAGTTATAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: KNPWLSGRRLLLLDASIMPICNF*KMSYSF Trigger: GAAACTATAACTCATTTTCCAGAAGTTACAGATGGG...CATGATCGATGCATCCAGCAGTAATAATCTTCTTCCTGAAAGCCATGGATTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR GCA 90 bp | ATGGCTTTCAGGAAGAAGATTATTACTGCTGGATGCATCGATCATGTTTTGTCTATTATTACTGCTGGATaGATCGATCATGTTTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: MAFRKKIITAGCIDHVLSIITAG*IDHVLS Trigger: AGACAAAACATGATCGATGCATCCAGCAGTAATAAT...AGACAAAACATGATCGATGCATCCAGCAGTAATAATCTTCTTCCTGAAAGCCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS CCA 90 bp | GGAGCCCATGGGCAGTCACAGGCTTCCCGGTATCTCAGATCTTCCTaGTCTTTGTCAGCCAGGGCTCAAGAATCCCCTGGAGAGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GAHGQSQASRYLRSS*SLSARAQESPGEAQ Trigger: CTGGGCCTCTCCAGGGGATTCTTGAGCCCTGGCTGACAAAGACCAGGAAGATCTGAGATACCGGGAAGCCTGTGACTGCCCATGGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS CCA 90 bp | AGGAATTTCGCGTCGTTTCCACGAAGAGAAGCATCAGGGAGCCCATaGGCAGTCACAGGCTTCCCGGTATCTCAGATCTTCCTGGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: RNFASFPRREASGSP*AVTGFPVSQIFLVF Trigger: AAAGACCAGGAAGATCTGAGATACCGGGAAGCCTGTGACTGCCCATGGGCTCCCTGATGCTTCTCTTCGTGGAAACGACGCGAAATTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR CAA 90 bp | AAGATTATTACTGCTGGATGCATCGATCATGTTTTGTCTGTATCTGATAGCCAGTTTAACGAGCACCACTaGTGTCTTGCCTTGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: KIITAGCIDHVLSVSDSQFNEHH*CLALDL Trigger: CAAGTCCAAGGCAAGACACAAGTGGTGCTCGTTAAA...CTGGCTATCAGATACAGACAAAACATGATCGATGCATCCAGCAGTAATAATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR CAA 90 bp | CTGGATGCATCGATCATGTTTTGTCTGTATCTGATAGCCAGCAGATGCAAGCAATTCCAAATTCGGTCCTaGTTAAAATTCTTGGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: LDASIMFCLYLIASRCKQFQIRS*LKFLVS Trigger: ACTGACCAAGAATTTTAACAAGGACCGAATTTGGAA...TTGCTTGCATCTGCTGGCTATCAGATACAGACAAAACATGATCGATGCATCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS TCA 90 bp | CGTAGGTCTTGTTTAACGAGCACCACTTGTGTCTTGCCTTGGACTTaGTGCAGTCATAATATGTTCCATTTTTATAGTGGAATGGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: RRSCLTSTTCVLPWT*CSHNMFHFYSGMER Trigger: TCTTTCCATTCCACTATAAAAATGGAACATATTATGACTGCATCAAGTCCAAGGCAAGACACAAGTGGTGCTCGTTAAACAAGACCTACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR CAA 90 bp | ATGGCTTTCAGGAAGAAGATTATTACTGCTGGATGCATCGATCATGTTTTGTCTAGGGAAATACACAGTTaGCAAAATCTTCTGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: MAFRKKIITAGCIDHVLSREIHS*QNLLHC Trigger: GCAGTGCAGAAGATTTTGCAAACTGTGTATTTCCCT...AGACAAAACATGATCGATGCATCCAGCAGTAATAATCTTCTTCCTGAAAGCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS-3UTR CAA 90 bp | AATCCATGGCTTTCAGGAAGAAGATTATTACTGCTGGATGCATCGATCATGTTTTGCATCGATCATGTTTaGTCTGTATCTGATAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: NPWLSGRRLLLLDASIMFCIDHV*SVSDSQ Trigger: CTGGCTATCAGATACAGACAAAACATGATCGATGCA...AAACATGATCGATGCATCCAGCAGTAATAATCTTCTTCCTGAAAGCCATGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS CAA 90 bp | CATGGGCAGTCACAGGCTTCCCGGTATCTCAGATCTTCCTGGTCTTaGTCAGCCAGGGCTCAAGAATCCCCTGGAGAGGCCCAGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: HGQSQASRYLRSSWS*SARAQESPGEAQGG Trigger: GCCTCCCTGGGCCTCTCCAGGGGATTCTTGAGCCCTGGCTGACAAAGACCAGGAAGATCTGAGATACCGGGAAGCCTGTGACTGCCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS CCA 72 bp | GGGCAGTCACAGGCTTCCCGGTATCTCAGATCTTCCTaGTCTTTGTCAGCCAGGGCTCAAGAATCCCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GQSQASRYLRSS*SLSARAQESPG Trigger: TCCAGGGGATTCTTGAGCCCTGGCTGACAAAGACCAGGAAGATCTGAGATACCGGGAAGCCTGTGACTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS CCA 72 bp | GCGTCGTTTCCACGAAGAGAAGCATCAGGGAGCCCATaGGCAGTCACAGGCTTCCCGGTATCTCAGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: ASFPRREASGSP*AVTGFPVSQIF Trigger: GAAGATCTGAGATACCGGGAAGCCTGTGACTGCCCATGGGCTCCCTGATGCTTCTCTTCGTGGAAACGACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS CAA 72 bp | TCACAGGCTTCCCGGTATCTCAGATCTTCCTGGTCTTaGTCAGCCAGGGCTCAAGAATCCCCTGGAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SQASRYLRSSWS*SARAQESPGEA Trigger: GGCCTCTCCAGGGGATTCTTGAGCCCTGGCTGACAAAGACCAGGAAGATCTGAGATACCGGGAAGCCTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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| CDS CAA 90 bp | GCTTTCAGGAAGAAGATTATTACTGCTGGATGCATCGATCATGTTTaGTCTGTATCTGATAGCCAGCAGATGCAAGCAAACCATCATTCA | + |
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Preference number: 6 (lower is better) Translates to: AFRKKIITAGCIDHV*SVSDSQQMQANHHS Trigger: TGAATGATGGTTTGCTTGCATCTGCTGGCTATCAGATACAGACAAAACATGATCGATGCATCCAGCAGTAATAATCTTCTTCCTGAAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344839.3 |
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