Pregenerated sensors for BSN-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000226913Ensembl transcript IDs: ENST00000421598.1, ENST00000433882.1, ENST00000665395.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAGGAGAGTTGCTACTCTCGAGTTCACCGAGGCGGAAAGCCCCTCTaGCTCCAAAGCAGGGCTCAGCGCGACGTCCCAGAGGCCGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: EESCYSRVHRGGKPL*LQSRAQRDVPEAAS Trigger: AGAAGCGGCCTCTGGGACGTCGCGCTGAGCCCTGCTTTGGAGTCAGAGGGGCTTTCCGCCTCGGTGAACTCGAGAGTAGCAACTCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421598.1 ENST00000433882.1 ENST00000665395.1 |
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| CDS TCA 90 bp | CCATCTGTGCCCGGGGCGCTTCCTGAGACTCCCAGTTCCTCAGTGTaGATCCCAGATGGTTCCCATCGCCATCTGGATAAAGGCTCCACT | + |
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Preference number: 5 (lower is better) Translates to: PSVPGALPETPSSSV*IPDGSHRHLDKGST Trigger: AGTGGAGCCTTTATCCAGATGGCGATGGGAACCATCTGGGATTCACACTGAGGAACTGGGAGTCTCAGGAAGCGCCCCGGGCACAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665395.1 |
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| CDS GCA 90 bp | GCCATTCTTCTTCACCCCCATAGACATCTTCATCTTTGGATCTCGTaGCTCCCCACGGAGGCTGCCATGCTGAAAGGATCAGCCCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: AILLHPHRHLHLWIS*LPTEAAMLKGSAQG Trigger: ACCCTGGGCTGATCCTTTCAGCATGGCAGCCTCCGTGGGGAGGCACGAGATCCAAAGATGAAGATGTCTATGGGGGTGAAGAAGAATGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS GCA 90 bp | CTGAGTAGGAGTCAGGTATGCACTGGCCAAAGGAGGATGACTGCCTaGATGCATGAGATAGGCAAAGCCAGCCCAGAGGCTTGTCTAGGG | + |
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Preference number: 5 (lower is better) Translates to: LSRSQVCTGQRRMTA*MHEIGKASPEACLG Trigger: CCCTAGACAAGCCTCTGGGCTGGCTTTGCCTATCTCATGCATGCAGGCAGTCATCCTCCTTTGGCCAGTGCATACCTGACTCCTACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS TCA 90 bp | GAGTCAGGTATGCACTGGCCAAAGGAGGATGACTGCCTGCATGCATaGGATAGGCAAAGCCAGCCCAGAGGCTTGTCTAGGGGAACACAA | + |
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Preference number: 5 (lower is better) Translates to: ESGMHWPKEDDCLHA*DRQSQPRGLSRGTQ Trigger: TTGTGTTCCCCTAGACAAGCCTCTGGGCTGGCTTTGCCTATCTCATGCATGCAGGCAGTCATCCTCCTTTGGCCAGTGCATACCTGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS TCA 90 bp | AGGAAAGTACAGGCTTGTGTGAGAAGCCACCACGGCAGACAATCCTaGGTAGCGGGCAGAAACCGGCTTGCGTCTCTGAATACACTTGTT | + |
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Preference number: 5 (lower is better) Translates to: RKVQACVRSHHGRQS*VAGRNRLASLNTLV Trigger: AACAAGTGTATTCAGAGACGCAAGCCGGTTTCTGCCCGCTACTCAGGATTGTCTGCCGTGGTGGCTTCTCACACAAGCCTGTACTTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421598.1 |
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| CDS GCA 90 bp | CTTGCGTCTCTGAATACACTTGTTCCTCTGCCTTCCCAACTCCTATaGATACTTTTGAGGCCATTCTCGGGTAGCCCCTCTCCTCTCCGA | + |
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Preference number: 5 (lower is better) Translates to: LASLNTLVPLPSQLL*ILLRPFSGSPSPLR Trigger: TCGGAGAGGAGAGGGGCTACCCGAGAATGGCCTCAAAAGTATGCATAGGAGTTGGGAAGGCAGAGGAACAAGTGTATTCAGAGACGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000421598.1 ENST00000433882.1 ENST00000665395.1 |
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| CDS CCA 90 bp | GCAAAGTTTGCCATTCTTCTTCACCCCCATAGACATCTTCATCTTTaGATCTCGTGCCTCCCCACGGAGGCTGCCATGCTGAAAGGATCA | + |
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Preference number: 5 (lower is better) Translates to: AKFAILLHPHRHLHL*ISCLPTEAAMLKGS Trigger: TGATCCTTTCAGCATGGCAGCCTCCGTGGGGAGGCACGAGATCCAAAGATGAAGATGTCTATGGGGGTGAAGAAGAATGGCAAACTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS TCA 90 bp | TGTTTCTCTCTCCCAAAGAAGGAGTGGGGCAGGAAGCCAATTTCCTaGGTTGCTTTTCATTGGGAAGTGAGACAGGCCTCAGCAGCACTT | + |
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Preference number: 5 (lower is better) Translates to: CFSLPKKEWGRKPIS*VAFHWEVRQASAAL Trigger: AAGTGCTGCTGAGGCCTGTCTCACTTCCCAATGAAAAGCAACTCAGGAAATTGGCTTCCTGCCCCACTCCTTCTTTGGGAGAGAGAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS TCA 90 bp | CTCAGTATACAATTGAGGTTGTCCAGGCCAGCCCAGGTAGGCTGCTaGGCAGAACGAAGATACAATCACTTGTTTGTAGCCTCATGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LSIQLRLSRPAQVGC*AERRYNHLFVASCQ Trigger: CTGGCATGAGGCTACAAACAAGTGATTGTATCTTCGTTCTGCTCAGCAGCCTACCTGGGCTGGCCTGGACAACCTCAATTGTATACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS TCA 90 bp | ATGATGCTTTGCCTACGGCACAACTACACCTCTGGGTGTAGTTCCTaGGGTCCTGTCATCTCTTCATTCTTCCACGATTTGCCTTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: MMLCLRHNYTSGCSS*GPVISSFFHDLPSG Trigger: ACCAGAAGGCAAATCGTGGAAGAATGAAGAGATGACAGGACCTCAGGAACTACACCCAGAGGTGTAGTTGTGCCGTAGGCAAAGCATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS CCA 90 bp | GTGTCTGAGAACATAGGCTGGAGAAGCAAGCTGGCACATGTCTGTTaGTTCCATTTAGGCATGTGGATTGATTGTCCTCTCATCTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: VSENIGWRSKLAHVC*FHLGMWIDCPLIWP Trigger: TGGCCAGATGAGAGGACAATCAATCCACATGCCTAAATGGAACCAACAGACATGTGCCAGCTTGCTTCTCCAGCCTATGTTCTCAGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421598.1 ENST00000433882.1 ENST00000665395.1 |
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| CDS CCA 90 bp | GTCTGTTGGTTCCATTTAGGCATGTGGATTGATTGTCCTCTCATCTaGCCATCTCCAAAATGGCTGCCATGTGTCACATGTTATGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: VCWFHLGMWIDCPLI*PSPKWLPCVTCYGL Trigger: AAGGCCATAACATGTGACACATGGCAGCCATTTTGGAGATGGCCAGATGAGAGGACAATCAATCCACATGCCTAAATGGAACCAACAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421598.1 ENST00000433882.1 ENST00000665395.1 |
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| CDS CCA 90 bp | TTCCATTTTCCCTCTGGTCTTCTACAAGTGTCTGAGAACATAGGCTaGAGAAGCAAGCTGGCACATGTCTGTTGGTTCCATTTAGGCATG | + |
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Preference number: 5 (lower is better) Translates to: FHFPSGLLQVSENIG*RSKLAHVCWFHLGM Trigger: CATGCCTAAATGGAACCAACAGACATGTGCCAGCTTGCTTCTCCAGCCTATGTTCTCAGACACTTGTAGAAGACCAGAGGGAAAATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS GCA 90 bp | AGGCATCAAGCAAATTCTGTACCTTCCAGCCTTATTCCTTTCTCCTaGTTTACCAAGGGCCATGGCCAGCTTAAGACCTCAGTATACAAT | + |
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Preference number: 5 (lower is better) Translates to: RHQANSVPSSLIPFS*FTKGHGQLKTSVYN Trigger: ATTGTATACTGAGGTCTTAAGCTGGCCATGGCCCTTGGTAAAGCAGGAGAAAGGAATAAGGCTGGAAGGTACAGAATTTGCTTGATGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS TCA 90 bp | CTGAGGTCCTGTCATCTCTTCATTCTTCCACGATTTGCCTTCTGGTaGCTAATCATTTCTACTAATCCCAGCAGTGAGTTGGCTCTGATT | + |
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Preference number: 5 (lower is better) Translates to: LRSCHLFILPRFAFW*LIISTNPSSELALI Trigger: AATCAGAGCCAACTCACTGCTGGGATTAGTAGAAATGATTAGTCACCAGAAGGCAAATCGTGGAAGAATGAAGAGATGACAGGACCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS GCA 72 bp | CAGCGCGACGTCCCAGAGGCCGCTTCTAGTGGCAGGTaGCCCTCCTCACAGGGCCCTCGCAGCCCCGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: QRDVPEAASSGR*PSSQGPRSPAG Trigger: GCCGGCGGGGCTGCGAGGGCCCTGTGAGGAGGGGCACCTGCCACTAGAAGCGGCCTCTGGGACGTCGCGCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000433882.1 |
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| CDS GCA 72 bp | TGCCCGCTGTGGCACTCCGGTTACCCGGAGGAGAGTTaGTACTCTCGAGTTCACCGAGGCGGAAAGCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: CPLWHSGYPEES*YSRVHRGGKPL Trigger: GAGGGGCTTTCCGCCTCGGTGAACTCGAGAGTAGCAACTCTCCTCCGGGTAACCGGAGTGCCACAGCGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421598.1 ENST00000433882.1 ENST00000665395.1 |
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| CDS CAA 72 bp | CTGCCCGCTGTGGCACTCCGGTTACCCGGAGGAGAGTaGCTACTCTCGAGTTCACCGAGGCGGAAAGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: LPAVALRLPGGE*LLSSSPRRKAP Trigger: AGGGGCTTTCCGCCTCGGTGAACTCGAGAGTAGCAACTCTCCTCCGGGTAACCGGAGTGCCACAGCGGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421598.1 ENST00000433882.1 ENST00000665395.1 |
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| CDS TCA 72 bp | TGCTACTCTCGAGTTCACCGAGGCGGAAAGCCCCTCTaGCTCCAAAGCAGGGCTCAGCGCGACGTCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: CYSRVHRGGKPL*LQSRAQRDVPE Trigger: CTCTGGGACGTCGCGCTGAGCCCTGCTTTGGAGTCAGAGGGGCTTTCCGCCTCGGTGAACTCGAGAGTAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421598.1 ENST00000433882.1 ENST00000665395.1 |
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| CDS CCA 72 bp | CTCTCCGAGGCCTGTCCTTATGACGCCTGCCCGCTGTaGCACTCCGGTTACCCGGAGGAGAGTTGCTACTCT | + |
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Preference number: 6 (lower is better) Translates to: LSEACPYDACPL*HSGYPEESCYS Trigger: AGAGTAGCAACTCTCCTCCGGGTAACCGGAGTGCCACAGCGGGCAGGCGTCATAAGGACAGGCCTCGGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421598.1 ENST00000433882.1 ENST00000665395.1 |
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| CDS TCA 72 bp | CAGGCTTGTGTGAGAAGCCACCACGGCAGACAATCCTaGGTAGCGGGCAGAAACCGGCTTGCGTCTCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: QACVRSHHGRQS*VAGRNRLASLN Trigger: ATTCAGAGACGCAAGCCGGTTTCTGCCCGCTACTCAGGATTGTCTGCCGTGGTGGCTTCTCACACAAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421598.1 |
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| CDS TCA 72 bp | ATGCACTGGCCAAAGGAGGATGACTGCCTGCATGCATaGGATAGGCAAAGCCAGCCCAGAGGCTTGTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: MHWPKEDDCLHA*DRQSQPRGLSR Trigger: CCTAGACAAGCCTCTGGGCTGGCTTTGCCTATCTCATGCATGCAGGCAGTCATCCTCCTTTGGCCAGTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS GCA 72 bp | AGTCAGGTATGCACTGGCCAAAGGAGGATGACTGCCTaGATGCATGAGATAGGCAAAGCCAGCCCAGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SQVCTGQRRMTA*MHEIGKASPEA Trigger: AGCCTCTGGGCTGGCTTTGCCTATCTCATGCATGCAGGCAGTCATCCTCCTTTGGCCAGTGCATACCTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS CCA 72 bp | GCCATTCTTCTTCACCCCCATAGACATCTTCATCTTTaGATCTCGTGCCTCCCCACGGAGGCTGCCATGCTG | + |
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Preference number: 6 (lower is better) Translates to: AILLHPHRHLHL*ISCLPTEAAML Trigger: CAGCATGGCAGCCTCCGTGGGGAGGCACGAGATCCAAAGATGAAGATGTCTATGGGGGTGAAGAAGAATGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS CAA 90 bp | CTGAATACACTTGTTCCTCTGCCTTCCCAACTCCTATGCATACTTTaGAGGCCATTCTCGGGTAGCCCCTCTCCTCTCCGAGGCCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LNTLVPLPSQLLCIL*RPFSGSPSPLRGLS Trigger: GGACAGGCCTCGGAGAGGAGAGGGGCTACCCGAGAATGGCCTCAAAAGTATGCATAGGAGTTGGGAAGGCAGAGGAACAAGTGTATTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421598.1 ENST00000433882.1 ENST00000665395.1 |
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| CDS GCA 72 bp | CTTCTCCCTTTCTTGGGGATGACCGGCATGATGCTTTaGCTACGGCACAACTACACCTCTGGGTGTAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: LLPFLGMTGMML*LRHNYTSGCSS Trigger: GGAACTACACCCAGAGGTGTAGTTGTGCCGTAGGCAAAGCATCATGCCGGTCATCCCCAAGAAAGGGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS GCA 72 bp | CTTCACCCCCATAGACATCTTCATCTTTGGATCTCGTaGCTCCCCACGGAGGCTGCCATGCTGAAAGGATCA | + |
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Preference number: 6 (lower is better) Translates to: LHPHRHLHLWIS*LPTEAAMLKGS Trigger: TGATCCTTTCAGCATGGCAGCCTCCGTGGGGAGGCACGAGATCCAAAGATGAAGATGTCTATGGGGGTGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS TCA 72 bp | TGCCTACGGCACAACTACACCTCTGGGTGTAGTTCCTaGGGTCCTGTCATCTCTTCATTCTTCCACGATTTG | + |
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Preference number: 6 (lower is better) Translates to: CLRHNYTSGCSS*GPVISSFFHDL Trigger: CAAATCGTGGAAGAATGAAGAGATGACAGGACCTCAGGAACTACACCCAGAGGTGTAGTTGTGCCGTAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS GCA 72 bp | CTGAATACACTTGTTCCTCTGCCTTCCCAACTCCTATaGATACTTTTGAGGCCATTCTCGGGTAGCCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LNTLVPLPSQLL*ILLRPFSGSPS Trigger: AGAGGGGCTACCCGAGAATGGCCTCAAAAGTATGCATAGGAGTTGGGAAGGCAGAGGAACAAGTGTATTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000421598.1 ENST00000433882.1 ENST00000665395.1 |
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| CDS CCA 72 bp | CAATGGGCCTTAATTAGCTTTCTTGGGAGCAATGCATaGGCAGTGGGGTTAGGCTGGTGGCAAACATTTCTG | + |
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Preference number: 6 (lower is better) Translates to: QWALISFLGSNA*AVGLGWWQTFL Trigger: CAGAAATGTTTGCCACCAGCCTAACCCCACTGCCCATGCATTGCTCCCAAGAAAGCTAATTAAGGCCCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS GCA 72 bp | GCAAATTCTGTACCTTCCAGCCTTATTCCTTTCTCCTaGTTTACCAAGGGCCATGGCCAGCTTAAGACCTCA | + |
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Preference number: 6 (lower is better) Translates to: ANSVPSSLIPFS*FTKGHGQLKTS Trigger: TGAGGTCTTAAGCTGGCCATGGCCCTTGGTAAAGCAGGAGAAAGGAATAAGGCTGGAAGGTACAGAATTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS CAA 72 bp | GCCACCACACTCGCCTGGGATGCAGTATGTTTTGACTaGGATGCTTATGACTTGGAGGAACCATGTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: ATTLAWDAVCFD*DAYDLEEPCLH Trigger: ATGAAGACATGGTTCCTCCAAGTCATAAGCATCCAAGTCAAAACATACTGCATCCCAGGCGAGTGTGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS CCA 72 bp | AACATAGGCTGGAGAAGCAAGCTGGCACATGTCTGTTaGTTCCATTTAGGCATGTGGATTGATTGTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: NIGWRSKLAHVC*FHLGMWIDCPL Trigger: GAGAGGACAATCAATCCACATGCCTAAATGGAACCAACAGACATGTGCCAGCTTGCTTCTCCAGCCTATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421598.1 ENST00000433882.1 ENST00000665395.1 |
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| CDS CCA 72 bp | CCACCACACTCGCCTGGGATGCAGTATGTTTTGACTTaGATGCTTATGACTTGGAGGAACCATGTCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: PPHSPGMQYVLT*MLMTWRNHVFI Trigger: AATGAAGACATGGTTCCTCCAAGTCATAAGCATCCAAGTCAAAACATACTGCATCCCAGGCGAGTGTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS GCA 72 bp | TTGTCTTCCTCCTCTGATCTCTCTAATGCCTACTCTTaGCTGCAAAGTTTGCCATTCTTCTTCACCCCCATA | + |
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Preference number: 6 (lower is better) Translates to: LSSSSDLSNAYS*LQSLPFFFTPI Trigger: TATGGGGGTGAAGAAGAATGGCAAACTTTGCAGGCAAGAGTAGGCATTAGAGAGATCAGAGGAGGAAGACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS GCA 72 bp | GCAGAACGAAGATACAATCACTTGTTTGTAGCCTCATaGCAGCTTAAGGCTCGCTTAGGGAACCACCTTATT | + |
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Preference number: 6 (lower is better) Translates to: AERRYNHLFVAS*QLKARLGNHLI Trigger: AATAAGGTGGTTCCCTAAGCGAGCCTTAAGCTGGCATGAGGCTACAAACAAGTGATTGTATCTTCGTTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421598.1 ENST00000665395.1 |
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| CDS CCA 72 bp | TGGATTGATTGTCCTCTCATCTGGCCATCTCCAAAATaGCTGCCATGTGTCACATGTTATGGCCTTTCTACA | + |
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Preference number: 6 (lower is better) Translates to: WIDCPLIWPSPK*LPCVTCYGLST Trigger: TGTAGAAAGGCCATAACATGTGACACATGGCAGCCATTTTGGAGATGGCCAGATGAGAGGACAATCAATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421598.1 ENST00000433882.1 ENST00000665395.1 |
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| CDS CCA 72 bp | AAGCTGGCACATGTCTGTTGGTTCCATTTAGGCATGTaGATTGATTGTCCTCTCATCTGGCCATCTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: KLAHVCWFHLGM*IDCPLIWPSPK Trigger: TTTTGGAGATGGCCAGATGAGAGGACAATCAATCCACATGCCTAAATGGAACCAACAGACATGTGCCAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421598.1 ENST00000433882.1 ENST00000665395.1 |
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| CDS TCA 72 bp | CCATGTGTCACATGTTATGGCCTTTCTACACAGTCATaGTTTATGACGTCAGAGATGAACTGGAATATAGGC | + |
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Preference number: 6 (lower is better) Translates to: PCVTCYGLSTQS*FMTSEMNWNIG Trigger: GCCTATATTCCAGTTCATCTCTGACGTCATAAATCATGACTGTGTAGAAAGGCCATAACATGTGACACATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421598.1 ENST00000433882.1 ENST00000665395.1 |
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