RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BSDC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000160058

Ensembl transcript IDs: ENST00000341071.11, ENST00000373520.8, ENST00000419121.6, ENST00000444377.5, ENST00000446293.6, ENST00000455895.7, ENST00000463967.1, ENST00000474414.5, ENST00000526031.5, ENST00000527163.5, ENST00000527513.5, ENST00000530485.1, ENST00000530753.1, ENST00000530876.5, ENST00000531222.1, ENST00000533084.1

Found 801 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGAGACGAGCGAGGGAGGCGAGAGATGCCATGGGTGGGGGAGCTaGTCCCTCTGGCTCCCTCACTCCCAGTCCTCCCACTCTACATCT +
Preference number: 1 (lower is better)
Translates to: AETSEGGERCHGWGS*SLWLPHSQSSHSTS
Trigger: AGATGTAGAGTGGGAGGACTGGGAGTGAGGGAGCCAGAGGGAGCAGCTCCCCCACCCATGGCATCTCTCGCCTCCCTCGCTCGTCTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341071.11
ENST00000444377.5
3UTR TCA 90 bp CTGGGGAGAGCTCTCACACCCAGGACCATTAGGCTCGCTTCCCTCTaGCCCACCAGGCCCACTCACCTCCCCGGAGGCATCCACTTTGGA +
Preference number: 1 (lower is better)
Translates to: LGRALTPRTIRLASL*PTRPTHLPGGIHFG
Trigger: TCCAAAGTGGATGCCTCCGGGGAGGTGAGTGGGCCTGGTGGGTCAGAGGGAAGCGAGCCTAATGGTCCTGGGTGTGAGAGCTCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CCA 90 bp GGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTaGGCTGAGACGAGCGAGGGAGGCGAGAGATGCCATGGGTGGGGG +
Preference number: 1 (lower is better)
Translates to: GWQRRFGGTFSVFQG*AETSEGGERCHGWG
Trigger: CCCCCACCCATGGCATCTCTCGCCTCCCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
3UTR GCA 90 bp CCTCAGGTGCAGTGGCCGGGTTGGCGATCTGTGTCACGAGGGAGATaGTCTCACTGCTCTCTGATGGAGTCACCTCTGCTGGGGGCTCAA +
Preference number: 1 (lower is better)
Translates to: PQVQWPGWRSVSRGR*SHCSLMESPLLGAQ
Trigger: TTGAGCCCCCAGCAGAGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCAACCCGGCCACTGCACCTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CCA 90 bp GCTTTTGGGACAGGTCCTTGGGTAGCACTCGTGCCTCAGGTGCAGTaGCCGGGTTGGCGATCTGTGTCACGAGGGAGATGCTCTCACTGC +
Preference number: 1 (lower is better)
Translates to: AFGTGPWVALVPQVQ*PGWRSVSRGRCSHC
Trigger: GCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR GCA 90 bp CAGCTGCTGGAACCATCTTGGTGTAGAGGGCCCGGATGGAGGGGCTaGCTACAAGGAGCTCTGAGATCTCCCCCTTCTTCTCCTCCAAGC +
Preference number: 1 (lower is better)
Translates to: QLLEPSWCRGPGWRG*LQGALRSPPSSPPS
Trigger: GCTTGGAGGAGAAGAAGGGGGAGATCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGGCCCTCTACACCAAGATGGTTCCAGCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CCA 90 bp CACAGCTGGGCTAAGGACTTGGGTGCATCCGACATGAAGAAGCCCTaGGAAGGCATGGGGACAGACCAGCGTGGGCTGGAGGAAAGGAAG +
Preference number: 1 (lower is better)
Translates to: HSWAKDLGASDMKKP*EGMGTDQRGLEERK
Trigger: CTTCCTTTCCTCCAGCCCACGCTGGTCTGTCCCCATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR CCA 90 bp ACAGGTCCTTGGGTAGCACTCGTGCCTCAGGTGCAGTGGCCGGGTTaGCGATCTGTGTCACGAGGGAGATGCTCTCACTGCTCTCTGATG +
Preference number: 1 (lower is better)
Translates to: TGPWVALVPQVQWPG*RSVSRGRCSHCSLM
Trigger: CATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTGCTACCCAAGGACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CCA 90 bp CCTGTTCCTCCAAGGATGCCTCTAGCAGCTTTTGGGACAGGTCCTTaGGTAGCACTCGTGCCTCAGGTGCAGTGGCCGGGTTGGCGATCT +
Preference number: 1 (lower is better)
Translates to: PVPPRMPLAAFGTGP*VALVPQVQWPGWRS
Trigger: AGATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAAAGCTGCTAGAGGCATCCTTGGAGGAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR GCA 90 bp CAGTGGCCGGGTTGGCGATCTGTGTCACGAGGGAGATGCTCTCACTaGTCTCTGATGGAGTCACCTCTGCTGGGGGCTCAACTGAAGTCA +
Preference number: 1 (lower is better)
Translates to: QWPGWRSVSRGRCSH*SLMESPLLGAQLKS
Trigger: TGACTTCAGTTGAGCCCCCAGCAGAGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCAACCCGGCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR TCA 90 bp CACATAGTTACTCCTGAGTCAGGCCCAGACCTAACCTCCACTTGCTaGGCAGAGCCACCTCCCATCCCCTACCCCAGGCCATACTCTGAG +
Preference number: 1 (lower is better)
Translates to: HIVTPESGPDLTSTC*AEPPPIPYPRPYSE
Trigger: CTCAGAGTATGGCCTGGGGTAGGGGATGGGAGGTGGCTCTGCTCAGCAAGTGGAGGTTAGGTCTGGGCCTGACTCAGGAGTAACTATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR GCA 90 bp GGCGTCAAACAATTCCGGGGGCCCATCTGGTTCATTACAGTAGGTTaGTGGGTCCGACTGCAGGCTATAGAGGCGAGCCTTGGTGCCATC +
Preference number: 1 (lower is better)
Translates to: GVKQFRGPIWFITVG*WVRLQAIEASLGAI
Trigger: GATGGCACCAAGGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAATTGTTTGACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CCA 90 bp CCCTTCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTaGCACAGCTGGGCTAAGGACTTGGGTGCATCCGACATGAAGAAG +
Preference number: 1 (lower is better)
Translates to: PFLGRGRNARANSCR*HSWAKDLGASDMKK
Trigger: CTTCTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR CCA 90 bp AATGGGAAACAGCTGCTGGAACCATCTTGGTGTAGAGGGCCCGGATaGAGGGGCTGCCTACAAGGAGCTCTGAGATCTCCCCCTTCTTCT +
Preference number: 1 (lower is better)
Translates to: NGKQLLEPSWCRGPG*RGCLQGALRSPPSS
Trigger: AGAAGAAGGGGGAGATCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGGCCCTCTACACCAAGATGGTTCCAGCAGCTGTTTCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR TCA 90 bp GGTGAGCACACCAGATTAGGTACAAGAATCACCAGAGCAGCATCGTaGAGCACCAGGCTCTCCAGAGATTCCTGCAGCCCCTCATTCCCC +
Preference number: 1 (lower is better)
Translates to: GEHTRLGTRITRAAS*STRLSRDSCSPSFP
Trigger: GGGGAATGAGGGGCTGCAGGAATCTCTGGAGAGCCTGGTGCTTCACGATGCTGCTCTGGTGATTCTTGTACCTAATCTGGTGTGCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR TCA 90 bp GCATTCTCTCCATCCCACCCCCTCACTGAAGGTTTGAAGTGGAAGTaGCCTCACTCTCTCGGTGTCCCTGACCCACGATCCCTTTCACTC +
Preference number: 1 (lower is better)
Translates to: AFSPSHPLTEGLKWK*PHSLGVPDPRSLSL
Trigger: GAGTGAAAGGGATCGTGGGTCAGGGACACCGAGAGAGTGAGGTCACTTCCACTTCAAACCTTCAGTGAGGGGGTGGGATGGAGAGAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR CCA 90 bp ACAAGGAGCTCTGAGATCTCCCCCTTCTTCTCCTCCAAGCAGAACTaGGAAAGCCAGGCGTCAAACAATTCCGGGGGCCCATCTGGTTCA +
Preference number: 1 (lower is better)
Translates to: TRSSEISPFFSSKQN*ESQASNNSGGPSGS
Trigger: TGAACCAGATGGGCCCCCGGAATTGTTTGACGCCTGGCTTTCCCAGTTCTGCTTGGAGGAGAAGAAGGGGGAGATCTCAGAGCTCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR GCA 90 bp GTTCACTGTCCCTGTTTAGCCAAGGGTAGGTGGCATGGCCCTCCCTaGCTGCTTATGTATGGACAGAGTATGTTGTCTCAGCTTCCTCCG +
Preference number: 1 (lower is better)
Translates to: VHCPCLAKGRWHGPP*LLMYGQSMLSQLPP
Trigger: CGGAGGAAGCTGAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCCATGCCACCTACCCTTGGCTAAACAGGGACAGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR CCA 90 bp GTCAAACAATTCCGGGGGCCCATCTGGTTCATTACAGTAGGTTGCTaGGTCCGACTGCAGGCTATAGAGGCGAGCCTTGGTGCCATCATA +
Preference number: 1 (lower is better)
Translates to: VKQFRGPIWFITVGC*VRLQAIEASLGAII
Trigger: TATGATGGCACCAAGGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAATTGTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR GCA 90 bp GTAATCAAGGGCAAGTTACTTAGTCTTTGGGTGAATGGAGGCCACTaGCTGAGTGGCACTGTGGCCAAAAGCAGAGGTGGCAGTGGCCTA +
Preference number: 1 (lower is better)
Translates to: VIKGKLLSLWVNGGH*LSGTVAKSRGGSGL
Trigger: TAGGCCACTGCCACCTCTGCTTTTGGCCACAGTGCCACTCAGGCAGTGGCCTCCATTCACCCAAAGACTAAGTAACTTGCCCTTGATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR CCA 90 bp GGTTTAGCTTCTGTCTACACAGGCAGAAGGGCTAGAACTATCCCTTaGGACTTCCCAGCAGGAGTCCTCAGGAACAGTGGGTGTTCAGCA +
Preference number: 1 (lower is better)
Translates to: GLASVYTGRRARTIP*DFPAGVLRNSGCSA
Trigger: TGCTGAACACCCACTGTTCCTGAGGACTCCTGCTGGGAAGTCCCAAGGGATAGTTCTAGCCCTTCTGCCTGTGTAGACAGAAGCTAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR GCA 90 bp AGTCTCCCCACGGAACGTTTTCTTGCTTTGTTCCTACTCTTGGCCTaGTGTCGGCTAAGCCCTGGTATAGCAGGTTCTAGAATGCTCACG +
Preference number: 1 (lower is better)
Translates to: SLPTERFLALFLLLA*CRLSPGIAGSRMLT
Trigger: CGTGAGCATTCTAGAACCTGCTATACCAGGGCTTAGCCGACAGCAGGCCAAGAGTAGGAACAAAGCAAGAAAACGTTCCGTGGGGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR GCA 90 bp CAACACCCTAATTCCCAGCTCAAGTCTCCCCACGGAACGTTTTCTTaGTTTGTTCCTACTCTTGGCCTGCTGTCGGCTAAGCCCTGGTAT +
Preference number: 1 (lower is better)
Translates to: QHPNSQLKSPHGTFS*FVPTLGLLSAKPWY
Trigger: ATACCAGGGCTTAGCCGACAGCAGGCCAAGAGTAGGAACAAAGCAAGAAAACGTTCCGTGGGGAGACTTGAGCTGGGAATTAGGGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR TCA 90 bp TACAGAGCTAAGGTCAAGAACTTGACCCTCTATCCACCCTGGAACTaGGGAAAAGTGCAGCCTGCTGATGACCAATGTTGTGGGTCTGAG +
Preference number: 1 (lower is better)
Translates to: YRAKVKNLTLYPPWN*GKVQPADDQCCGSE
Trigger: CTCAGACCCACAACATTGGTCATCAGCAGGCTGCACTTTTCCTCAGTTCCAGGGTGGATAGAGGGTCAAGTTCTTGACCTTAGCTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341071.11
ENST00000373520.8
3UTR CCA 90 bp AAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTaGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGAT +
Preference number: 1 (lower is better)
Translates to: KNTGSSGEEDRFPLP*VILLLAQVRVSGRD
Trigger: ATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
3UTR TCA 90 bp AGCAGTTTCTCAGGCAATTTTGATACAGAGCTAAGGTCAAGAACTTaGCCCTCTATCCACCCTGGAACTGAGGAAAAGTGCAGCCTGCTG +
Preference number: 1 (lower is better)
Translates to: SSFSGNFDTELRSRT*PSIHPGTEEKCSLL
Trigger: CAGCAGGCTGCACTTTTCCTCAGTTCCAGGGTGGATAGAGGGTCAAGTTCTTGACCTTAGCTCTGTATCAAAATTGCCTGAGAAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341071.11
ENST00000373520.8
3UTR TCA 90 bp GCTCAGCATGACATCTGTTTTCTTAAGCAGTTTCTCAGGCAATTTTaGTACAGAGCTAAGGTCAAGAACTTGACCCTCTATCCACCCTGG +
Preference number: 1 (lower is better)
Translates to: AQHDICFLKQFLRQF*YRAKVKNLTLYPPW
Trigger: CCAGGGTGGATAGAGGGTCAAGTTCTTGACCTTAGCTCTGTATCAAAATTGCCTGAGAAACTGCTTAAGAAAACAGATGTCATGCTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341071.11
ENST00000373520.8
3UTR TCA 90 bp TTAATAACTGGAATGGGTTTTGTGGGGTTTATCACTAATGTCTCCTaGGTGCTGGTCACCATGTCTCAGGCAATAGCCCTAAGGTGTCTA +
Preference number: 1 (lower is better)
Translates to: LITGMGFVGFITNVS*VLVTMSQAIALRCL
Trigger: TAGACACCTTAGGGCTATTGCCTGAGACATGGTGACCAGCACTCAGGAGACATTAGTGATAAACCCCACAAAACCCATTCCAGTTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR CCA 90 bp AGTGCTGGTCACCATGTCTCAGGCAATAGCCCTAAGGTGTCTACATaGATCACCTCATTACAGCTTATAGCCAGGTCTTATAATGATCAA +
Preference number: 1 (lower is better)
Translates to: SAGHHVSGNSPKVST*ITSLQLIARSYNDQ
Trigger: TTGATCATTATAAGACCTGGCTATAAGCTGTAATGAGGTGATCCATGTAGACACCTTAGGGCTATTGCCTGAGACATGGTGACCAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR CCA 90 bp CCTCTTTCTAACAGGCTCATAAGTTACATGATGGAAGGACTCATGTaGTTCTTATGTGACAGTGGAACTAACGCTGACATGAATCAGATG +
Preference number: 1 (lower is better)
Translates to: PLSNRLISYMMEGLM*FLCDSGTNADMNQM
Trigger: CATCTGATTCATGTCAGCGTTAGTTCCACTGTCACATAAGAACCACATGAGTCCTTCCATCATGTAACTTATGAGCCTGTTAGAAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR-3UTR CCA 90 bp CACCCTGGAACTGAGGAAAAGTGCAGCCTGCTGATGACCAATGTTGTGGGTCTGTCTGGGCCGCCGGTGTaGCCAGCAGGCGTTAGGGGC +
Preference number: 2 (lower is better)
Translates to: HPGTEEKCSLLMTNVVGLSGPPV*PAGVRG
Trigger: GCCCCTAACGCCTGCTGGCCACACCGGCGGCCCAGA...CAGACCCACAACATTGGTCATCAGCAGGCTGCACTTTTCCTCAGTTCCAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CAA 90 bp GACAGGTCCTTGGGTAGCACTCGTGCCTCAGGTGCAGTGGCCGGGTaGGCGATCTGTGTCACGAGGGAGATGCTCTCACTGCTCTCTGAT +
Preference number: 2 (lower is better)
Translates to: DRSLGSTRASGAVAG*AICVTREMLSLLSD
Trigger: ATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTGCTACCCAAGGACCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR GCA 90 bp AAATGTGTTCACTGTCCCTGTTTAGCCAAGGGTAGGTGGCATGGCCCTCCCTGCGAGGGAGGCGAGAGATaGCATGGGTGGGGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: KCVHCPCLAKGRWHGPPCEGGER*HGWGSC
Trigger: GCAGCTCCCCCACCCATGGCATCTCTCGCCTCCCTC...GCAGGGAGGGCCATGCCACCTACCCTTGGCTAAACAGGGACAGTGAACACATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR CAA 90 bp AACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGCTAAGGACTaGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGCATGGGGACA +
Preference number: 2 (lower is better)
Translates to: NARANSCRWHSWAKD*GASDMKKPWEGMGT
Trigger: TGTCCCCATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR-3UTR GCA 90 bp TGGGTAGCACTCGTGCCTCAGGTGCAGTGGCCGGGTTGGCGATCTGTGTCACGAGGGAGATGCTCTCACTaGTCTCTGATGGAGTCACCT +
Preference number: 2 (lower is better)
Translates to: WVALVPQVQWPGWRSVSRGRCSH*SLMESP
Trigger: AGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCC...TCGTGACACAGATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTGCTACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR TCA 90 bp GGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGCTAAGGACTCTCAGGCCTCATACCTaGGGACCACAACTCAGAAGG +
Preference number: 2 (lower is better)
Translates to: GEETQERTPAGGTAGLRTLRPHT*GPQLRR
Trigger: CCTTCTGAGTTGTGGTCCTCAGGTATGAGGCCTGAG...AGTCCTTAGCCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR-3UTR GCA 90 bp TTGGCGATCTGTGTCACGAGGGAGATGCTCTCACTGCTCTCTGATGGAGTCACCCCCGGATGGAGGGGCTaGCTACAAGGAGCTCTGAGA +
Preference number: 2 (lower is better)
Translates to: LAICVTREMLSLLSDGVTPGWRG*LQGALR
Trigger: TCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGG...GGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR CCA 90 bp GCGATCTGTGTCACGAGGGAGATGCTCTCACTGCTCTCTGATGGAGTCACCTCTTGTAGAGGGCCCGGATaGAGGGGCTGCCTACAAGGA +
Preference number: 2 (lower is better)
Translates to: AICVTREMLSLLSDGVTSCRGPG*RGCLQG
Trigger: TCCTTGTAGGCAGCCCCTCCATCCGGGCCCTCTACA...AGAGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CAA 90 bp AGTGCAGAGATGGCCTCCCGACTCCTTGTCCCAGTGAGAGGCCTGTaGCGAGCCCTGACCCTTTCTCATCCCAAAGGCAAAGCTGAATCT +
Preference number: 2 (lower is better)
Translates to: SAEMASRLLVPVRGL*RALTLSHPKGKAES
Trigger: AGATTCAGCTTTGCCTTTGGGATGAGAAAGGGTCAGGGCTCGCAACAGGCCTCTCACTGGGACAAGGAGTCGGGAGGCCATCTCTGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455895.7
3UTR-3UTR TCA 90 bp TGGCGATCTGTGTCACGAGGGAGATGCTCTCACTGCTCTCTGATGGAGTCACCTCCAATGTTGTGGGTCTaGGCAGGAAGCTCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: WRSVSRGRCSHCSLMESPPMLWV*AGSSSS
Trigger: GGAGCTGGAGCTTCCTGCTCAGACCCACAACATTGG...AGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR TCA 90 bp ACCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTGCACCTCCTCTTCAGTCTGGGTGAAATGCCCATaGGCTCCTCTTCCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: TSPEASTLESAICTSSSVWVKCP*APLPPP
Trigger: AGGAGGAGGAAGAGGAGCTCATGGGCATTTCACCCA...GACTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR TCA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTCCAATGTTGTGGGTCTaGGCAGGAAGCTCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: RALVGRGDLGEHSQSSRAPMLWV*AGSSSS
Trigger: GGAGCTGGAGCTTCCTGCTCAGACCCACAACATTGG...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR-3UTR TCA 90 bp ACCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTGCACCTCCTCTTCAGTCTGCTGGGGGCTCAACTaGAGTCACCAGATTCTCTTC +
Preference number: 2 (lower is better)
Translates to: TSPEASTLESAICTSSSVCWGLN*SHQILF
Trigger: GAAGAGAATCTGGTGACTTCAGTTGAGCCCCCAGCA...GACTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR CCA 90 bp GGAGTCACCTCTGCTGGGGGCTCAACTGAAGTCACCAGATTCTCTTCACAGGGGGTCGATGGTTTTGTCTaGCGAAGGGGCAAAGGTGTC +
Preference number: 2 (lower is better)
Translates to: GVTSAGGSTEVTRFSSQGVDGFV*RRGKGV
Trigger: GACACCTTTGCCCCTTCGCCAGACAAAACCATCGAC...CCCCTGTGAAGAGAATCTGGTGACTTCAGTTGAGCCCCCAGCAGAGGTGACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR CCA 90 bp ACCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTGCACCTCCTCTTCAGTCTATAGAGGCGAGCCTTaGTGCCATCATAGGGCTCAG +
Preference number: 2 (lower is better)
Translates to: TSPEASTLESAICTSSSVYRGEP*CHHRAQ
Trigger: CTGAGCCCTATGATGGCACCAAGGCTCGCCTCTATA...GACTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR TCA 90 bp GCTAAGGACTTGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGCATGGGGACACTAAGGTCAAGAACTTaGCCCTCTATCCACCCTGGA +
Preference number: 2 (lower is better)
Translates to: AKDLGASDMKKPWEGMGTLRSRT*PSIHPG
Trigger: TCCAGGGTGGATAGAGGGTCAAGTTCTTGACCTTAG...TGTCCCCATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR-3UTR TCA 90 bp ACCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTGCACCTCCTCTTCAGTCCTAAGGTCAAGAACTTaGCCCTCTATCCACCCTGGA +
Preference number: 2 (lower is better)
Translates to: TSPEASTLESAICTSSSVLRSRT*PSIHPG
Trigger: TCCAGGGTGGATAGAGGGTCAAGTTCTTGACCTTAG...GACTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR TCA 90 bp GCGATCTGTGTCACGAGGGAGATGCTCTCACTGCTCTCTGATGGAGTCACCTCTCCGATGCCAGAATTCTaGATGGGAAACAGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: AICVTREMLSLLSDGVTSPMPEF*MGNSCW
Trigger: CCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGG...AGAGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR TCA 90 bp AGTGCAGAGATGGCCTCCCGACTCCTTGTCCCAGTGAGAGGCCTGTTGCGAGCCCCTTTCAGCTTCGGGTaGATCACTTTAATGCTGTTA +
Preference number: 2 (lower is better)
Translates to: SAEMASRLLVPVRGLLRAPFSFG*ITLMLL
Trigger: TAACAGCATTAAAGTGATTCACCCGAAGCTGAAAGG...GGCTCGCAACAGGCCTCTCACTGGGACAAGGAGTCGGGAGGCCATCTCTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455895.7
3UTR-3UTR TCA 90 bp AGCTGGGCTAAGGACTTGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGCATGAAGCTGAATCTGGGATaGGGACAAGGTACGTCCTCT +
Preference number: 2 (lower is better)
Translates to: SWAKDLGASDMKKPWEGMKLNLG*GQGTSS
Trigger: AGAGGACGTACCTTGTCCTCATCCCAGATTCAGCTT...CATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455895.7
3UTR CAA 90 bp AGGTGGCATGGCCCTCCCTGCCTGCTTATGTATGGACAGAGTATGTaGTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTC +
Preference number: 2 (lower is better)
Translates to: RWHGPPCLLMYGQSM*SQLPPRETGGLASV
Trigger: GACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCCATGCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR-3UTR GCA 90 bp GCGATCTGTGTCACGAGGGAGATGCTCTCACTGCTCTCTGATGGAGTCACCTCTTTCATTACAGTAGGTTaGTGGGTCCGACTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: AICVTREMLSLLSDGVTSFITVG*WVRLQA
Trigger: AGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAA...AGAGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR CCA 90 bp CCCTGTTCCTCCAAGGATGCCTCTAGCAGCTTTTGGGACAGGTCCTTGGGTAGCATTACAGTAGGTTGCTaGGTCCGACTGCAGGCTATA +
Preference number: 2 (lower is better)
Translates to: PCSSKDASSSFWDRSLGSITVGC*VRLQAI
Trigger: TATAGCCTGCAGTCGGACCCAGCAACCTACTGTAAT...GCTACCCAAGGACCTGTCCCAAAAGCTGCTAGAGGCATCCTTGGAGGAACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR CCA 90 bp CACCCTGGAACTGAGGAAAAGTGCAGCCTGCTGATGACCAATGTTGTGGGTCTGTTCCGGGGGCCCATCTaGTTCATTACAGTAGGTTGC +
Preference number: 2 (lower is better)
Translates to: HPGTEEKCSLLMTNVVGLFRGPI*FITVGC
Trigger: GCAACCTACTGTAATGAACCAGATGGGCCCCCGGAA...CAGACCCACAACATTGGTCATCAGCAGGCTGCACTTTTCCTCAGTTCCAGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CAA 90 bp ACCCTAATTCCCAGCTCAAGTCTCCCCACGGAACGTTTTCTTGCTTaGTTCCTACTCTTGGCCTGCTGTCGGCTAAGCCCTGGTATAGCA +
Preference number: 2 (lower is better)
Translates to: TLIPSSSLPTERFLA*FLLLACCRLSPGIA
Trigger: TGCTATACCAGGGCTTAGCCGACAGCAGGCCAAGAGTAGGAACAAAGCAAGAAAACGTTCCGTGGGGAGACTTGAGCTGGGAATTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR CAA 90 bp TCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTaGGCACAAGTCAGAGTTTCTGGCCGGGATTTAGAGAGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: SGEEDRFPLPWVILL*AQVRVSGRDLESPF
Trigger: GAAGGGGCTCTCTAAATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
3UTR CAA 90 bp TCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATaGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTTAGAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: SSGEEDRFPLPWVIL*LAQVRVSGRDLESP
Trigger: GGGGCTCTCTAAATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
3UTR-3UTR GCA 90 bp TGGCGATCTGTGTCACGAGGGAGATGCTCTCACTGCTCTCTGATGGAGTCACCTGGAACTGAGGAAAAGTaGAGCCTGCTGATGACCAAT +
Preference number: 2 (lower is better)
Translates to: WRSVSRGRCSHCSLMESPGTEEK*SLLMTN
Trigger: ATTGGTCATCAGCAGGCTGCACTTTTCCTCAGTTCC...AGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR CCA 90 bp TATGTTGTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCCACTGCCTGAGTaGCACTGTGGCCAAAAGCAG +
Preference number: 2 (lower is better)
Translates to: YVVSASSERDWWFSFCLHRPLPE*HCGQKQ
Trigger: CTGCTTTTGGCCACAGTGCCACTCAGGCAGTGGCCT...GTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGACAACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR-3UTR CCA 90 bp TGGCGATCTGTGTCACGAGGGAGATGCTCTCACTGCTCTCTGATGGAGTCACCTTGCCAGAATTCTGAATaGGAAACAGCTGCTGGAACC +
Preference number: 2 (lower is better)
Translates to: WRSVSRGRCSHCSLMESPCQNSE*ETAAGT
Trigger: GGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCA...AGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR TCA 90 bp TGGCGATCTGTGTCACGAGGGAGATGCTCTCACTGCTCTCTGATGGAGTCACCTTTTCTCAGGCAATTTTaGTACAGAGCTAAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: WRSVSRGRCSHCSLMESPFLRQF*YRAKVK
Trigger: CTTGACCTTAGCTCTGTATCAAAATTGCCTGAGAAA...AGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR GCA 90 bp TCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTTGGAGATATGAGAGGCGAGCCTTGGTaGCATCATAGGGCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: SGNVEILATGTFASFGDMRGEPW*HHRAQL
Trigger: CAGCTGAGCCCTATGATGGCACCAAGGCTCGCCTCT...CATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR CCA 90 bp TATGTTGTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACATGTCTCCTGAGTGCTaGTCACCATGTCTCAGGCAA +
Preference number: 2 (lower is better)
Translates to: YVVSASSERDWWFSFCLHMSPEC*SPCLRQ
Trigger: TTGCCTGAGACATGGTGACCAGCACTCAGGAGACAT...GTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGACAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR-3UTR CCA 90 bp AAGGTGATGGCTGCCTACAGGAACCAAGTCAGCCTCAGTCCTTTAAGGAGAACTCTGTCACTTATTAGCTaGGAGAGCTTTGGACTGTTC +
Preference number: 2 (lower is better)
Translates to: KVMAAYRNQVSLSPLRRTLSLIS*ESFGLF
Trigger: GAACAGTCCAAAGCTCTCCCAGCTAATAAGTGACAG...AGTTCTCCTTAAAGGACTGAGGCTGACTTGGTTCCTGTAGGCAGCCATCACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR-3UTR TCA 90 bp CAACACCCTAATTCCCAGCTCAAGTCTCCCCACGGAACGTTTTCTTGCTTTGTTAGTGCAAAATACTCCTaGGTAGGTAAAATACTCCCC +
Preference number: 2 (lower is better)
Translates to: QHPNSQLKSPHGTFSCFVSAKYS*VGKILP
Trigger: GGGGAGTATTTTACCTACTCAGGAGTATTTTGCACT...AACAAAGCAAGAAAACGTTCCGTGGGGAGACTTGAGCTGGGAATTAGGGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR GCA 72 bp AGCGAGGGAGGCGAGAGATGCCATGGGTGGGGGAGCTaGTCCCTCTGGCTCCCTCACTCCCAGTCCTCCCAC +
Preference number: 3 (lower is better)
Translates to: SEGGERCHGWGS*SLWLPHSQSSH
Trigger: GTGGGAGGACTGGGAGTGAGGGAGCCAGAGGGAGCAGCTCCCCCACCCATGGCATCTCTCGCCTCCCTCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341071.11
ENST00000444377.5
3UTR GCA 72 bp CCTCTTCCTCCTCCTCCCAGCCGGGCTCTTCAGAGATaGTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: PLPPPPSRALQR*SVPPAASGRPS
Trigger: GGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCTCTGAAGAGCCCGGCTGGGAGGAGGAGGAAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
3UTR TCA 72 bp GCTCTCACACCCAGGACCATTAGGCTCGCTTCCCTCTaGCCCACCAGGCCCACTCACCTCCCCGGAGGCATC +
Preference number: 3 (lower is better)
Translates to: ALTPRTIRLASL*PTRPTHLPGGI
Trigger: GATGCCTCCGGGGAGGTGAGTGGGCCTGGTGGGTCAGAGGGAAGCGAGCCTAATGGTCCTGGGTGTGAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CCA 72 bp TGGGTAGCACTCGTGCCTCAGGTGCAGTGGCCGGGTTaGCGATCTGTGTCACGAGGGAGATGCTCTCACTGC +
Preference number: 3 (lower is better)
Translates to: WVALVPQVQWPG*RSVSRGRCSHC
Trigger: GCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTGCTACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CCA 72 bp ACAGGTCCTTGGGTAGCACTCGTGCCTCAGGTGCAGTaGCCGGGTTGGCGATCTGTGTCACGAGGGAGATGC +
Preference number: 3 (lower is better)
Translates to: TGPWVALVPQVQ*PGWRSVSRGRC
Trigger: GCATCTCCCTCGTGACACAGATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTGCTACCCAAGGACCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CCA 72 bp GCTAAGGACTTGGGTGCATCCGACATGAAGAAGCCCTaGGAAGGCATGGGGACAGACCAGCGTGGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: AKDLGASDMKKP*EGMGTDQRGLE
Trigger: CTCCAGCCCACGCTGGTCTGTCCCCATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR CCA 72 bp CAGCTGCTGGAACCATCTTGGTGTAGAGGGCCCGGATaGAGGGGCTGCCTACAAGGAGCTCTGAGATCTCCC +
Preference number: 3 (lower is better)
Translates to: QLLEPSWCRGPG*RGCLQGALRSP
Trigger: GGGAGATCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGGCCCTCTACACCAAGATGGTTCCAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CCA 72 bp CCAAGGATGCCTCTAGCAGCTTTTGGGACAGGTCCTTaGGTAGCACTCGTGCCTCAGGTGCAGTGGCCGGGT +
Preference number: 3 (lower is better)
Translates to: PRMPLAAFGTGP*VALVPQVQWPG
Trigger: ACCCGGCCACTGCACCTGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAAAGCTGCTAGAGGCATCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CCA 72 bp CTGTCTCTGGCTCCAAGTGGGAAGCCAGTCCTGCCCTaGCCCAGTGCAGCTGCCAAGGGGACAAAAACAGAC +
Preference number: 3 (lower is better)
Translates to: LSLAPSGKPVLP*PSAAAKGTKTD
Trigger: GTCTGTTTTTGTCCCCTTGGCAGCTGCACTGGGCCAGGGCAGGACTGGCTTCCCACTTGGAGCCAGAGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455895.7
3UTR-3UTR CAA 90 bp CTGACCCACCAGGCCCACTCACCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCGCAGTCGATGGTTTaGTCTGGCGAAGGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: LTHQAHSPPRRHPLWKVPSQSMV*SGEGAK
Trigger: CTTTGCCCCTTCGCCAGACAAAACCATCGACTGCGA...TGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGTGAGTGGGCCTGGTGGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR GCA 72 bp CAGTGGCCGGGTTGGCGATCTGTGTCACGAGGGAGATaGTCTCACTGCTCTCTGATGGAGTCACCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: QWPGWRSVSRGR*SHCSLMESPLL
Trigger: CAGCAGAGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCAACCCGGCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR CAA 90 bp CTGACCCACCAGGCCCACTCACCTCCCCGGAGGCATCCACTTTGGAAAGTGCCAGCTAAGGTCAAGAACTaGACCCTCTATCCACCCTGG +
Preference number: 3 (lower is better)
Translates to: LTHQAHSPPRRHPLWKVPAKVKN*TLYPPW
Trigger: CCAGGGTGGATAGAGGGTCAAGTTCTTGACCTTAGC...TGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGTGAGTGGGCCTGGTGGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR TCA 72 bp CCATCCCACCCCCTCACTGAAGGTTTGAAGTGGAAGTaGCCTCACTCTCTCGGTGTCCCTGACCCACGATCC +
Preference number: 3 (lower is better)
Translates to: PSHPLTEGLKWK*PHSLGVPDPRS
Trigger: GGATCGTGGGTCAGGGACACCGAGAGAGTGAGGTCACTTCCACTTCAAACCTTCAGTGAGGGGGTGGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR GCA 72 bp GAACCATCTTGGTGTAGAGGGCCCGGATGGAGGGGCTaGCTACAAGGAGCTCTGAGATCTCCCCCTTCTTCT +
Preference number: 3 (lower is better)
Translates to: EPSWCRGPGWRG*LQGALRSPPSS
Trigger: AGAAGAAGGGGGAGATCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGGCCCTCTACACCAAGATGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR GCA 72 bp GGTTGGCGATCTGTGTCACGAGGGAGATGCTCTCACTaGTCTCTGATGGAGTCACCTCTGCTGGGGGCTCAA +
Preference number: 3 (lower is better)
Translates to: GWRSVSRGRCSH*SLMESPLLGAQ
Trigger: TTGAGCCCCCAGCAGAGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CCA 72 bp AGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTaGGCTGAGACGAGCGAGGGAGGCGAGAGATGCCAT +
Preference number: 3 (lower is better)
Translates to: RRFGGTFSVFQG*AETSEGGERCH
Trigger: ATGGCATCTCTCGCCTCCCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
3UTR CCA 72 bp TTCCGGGGGCCCATCTGGTTCATTACAGTAGGTTGCTaGGTCCGACTGCAGGCTATAGAGGCGAGCCTTGGT +
Preference number: 3 (lower is better)
Translates to: FRGPIWFITVGC*VRLQAIEASLG
Trigger: ACCAAGGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CCA 72 bp CACCAGGCCCACTCACCTCCCCGGAGGCATCCACTTTaGAAAGTGCCATCTGCACCTCCTCTTCAGTCATGT +
Preference number: 3 (lower is better)
Translates to: HQAHSPPRRHPL*KVPSAPPLQSC
Trigger: ACATGACTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGTGAGTGGGCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR CAA 90 bp TCACCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTGCACCTCCTCTTCAGGTTCATTACAGTAGGTaGCTGGGTCCGACTGCAGGC +
Preference number: 3 (lower is better)
Translates to: SPPRRHPLWKVPSAPPLQVHYSR*LGPTAG
Trigger: GCCTGCAGTCGGACCCAGCAACCTACTGTAATGAAC...CTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR CAA 90 bp CTGACCCACCAGGCCCACTCACCTCCCCGGAGGCATCCACTTTGGAAAGTGCCAGGGAATGTAGAAATTTaGGCCACAGGAACCTTTGCC +
Preference number: 3 (lower is better)
Translates to: LTHQAHSPPRRHPLWKVPGNVEI*ATGTFA
Trigger: GGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCC...TGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGTGAGTGGGCCTGGTGGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR GCA 72 bp TCCAGAGATTCCTGCAGCCCCTCATTCCCCCAGAGGTaGAGCTTTACCAGAGTGGAGGGTGAGAGCACAAAG +
Preference number: 3 (lower is better)
Translates to: SRDSCSPSFPQR*SFTRVEGESTK
Trigger: CTTTGTGCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGCTGCAGGAATCTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR GCA 72 bp CAATTCCGGGGGCCCATCTGGTTCATTACAGTAGGTTaGTGGGTCCGACTGCAGGCTATAGAGGCGAGCCTT +
Preference number: 3 (lower is better)
Translates to: QFRGPIWFITVG*WVRLQAIEASL
Trigger: AAGGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR GCA 72 bp CCCACTCACCTCCCCGGAGGCATCCACTTTGGAAAGTaGCATCTGCACCTCCTCTTCAGTCATGTCCAAGTC +
Preference number: 3 (lower is better)
Translates to: PTHLPGGIHFGK*HLHLLFSHVQV
Trigger: GACTTGGACATGACTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGTGAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CCA 72 bp CACTATCCGAGTTCAGCTCAAACACCCGTAAGTCTGTaGGCGCCTCCTCCCTCAGAGTCTCTACTCTGGCTG +
Preference number: 3 (lower is better)
Translates to: HYPSSAQTPVSL*APPPSESLLWL
Trigger: CAGCCAGAGTAGAGACTCTGAGGGAGGAGGCGCCCACAGACTTACGGGTGTTTGAGCTGAACTCGGATAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR-3UTR CAA 90 bp ACAGGGGAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACTTAGCTGGGAGAGCTTaGGACTGTTCCAGCCTCTCA +
Preference number: 3 (lower is better)
Translates to: TGELRWVAGWTRYPARQHLAGRA*DCSSLS
Trigger: TGAGAGGCTGGAACAGTCCAAAGCTCTCCCAGCTAA...GTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTCCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR GCA 72 bp GGCAAGTTACTTAGTCTTTGGGTGAATGGAGGCCACTaGCTGAGTGGCACTGTGGCCAAAAGCAGAGGTGGC +
Preference number: 3 (lower is better)
Translates to: GKLLSLWVNGGH*LSGTVAKSRGG
Trigger: GCCACCTCTGCTTTTGGCCACAGTGCCACTCAGGCAGTGGCCTCCATTCACCCAAAGACTAAGTAACTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR CCA 72 bp CAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTaGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTC +
Preference number: 3 (lower is better)
Translates to: QGATRICAQSSG*QRRFGGTFSVF
Trigger: GAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
3UTR CCA 72 bp TCTGTCTACACAGGCAGAAGGGCTAGAACTATCCCTTaGGACTTCCCAGCAGGAGTCCTCAGGAACAGTGGG +
Preference number: 3 (lower is better)
Translates to: SVYTGRRARTIP*DFPAGVLRNSG
Trigger: CCCACTGTTCCTGAGGACTCCTGCTGGGAAGTCCCAAGGGATAGTTCTAGCCCTTCTGCCTGTGTAGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR TCA 72 bp ATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTaGGAGCACAAAGGCTGGGTCTGTCTTCAGGAAGAA +
Preference number: 3 (lower is better)
Translates to: IPPEVQLYQSGG*EHKGWVCLQEE
Trigger: TTCTTCCTGAAGACAGACCCAGCCTTTGTGCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR TCA 72 bp ACCAGATTAGGTACAAGAATCACCAGAGCAGCATCGTaGAGCACCAGGCTCTCCAGAGATTCCTGCAGCCCC +
Preference number: 3 (lower is better)
Translates to: TRLGTRITRAAS*STRLSRDSCSP
Trigger: GGGGCTGCAGGAATCTCTGGAGAGCCTGGTGCTTCACGATGCTGCTCTGGTGATTCTTGTACCTAATCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR GCA 72 bp TCCCCCAACCAACACCAGACACCACAAGGTGATGGCTaGCTACAGGAACCAAGTCAGCCTCAGTCCTTTAAG +
Preference number: 3 (lower is better)
Translates to: SPNQHQTPQGDG*LQEPSQPQSFK
Trigger: CTTAAAGGACTGAGGCTGACTTGGTTCCTGTAGGCAGCCATCACCTTGTGGTGTCTGGTGTTGGTTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR GCA 72 bp ATCTTCCAGCTCCCCGGAGGCATCCACTTTGGAAAGTaGCATCTGCACCTCCTCTTCAGTCATGTCCAAGTC +
Preference number: 3 (lower is better)
Translates to: IFQLPGGIHFGK*HLHLLFSHVQV
Trigger: GACTTGGACATGACTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGCTGGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444377.5
3UTR TCA 72 bp CCCTTTCTCATCCCAAAGGCAAAGCTGAATCTGGGATaGGGACAAGGTACGTCCTCTGGACCTAGGCTATCC +
Preference number: 3 (lower is better)
Translates to: PFLIPKAKLNLG*GQGTSSGPRLS
Trigger: GGATAGCCTAGGTCCAGAGGACGTACCTTGTCCTCATCCCAGATTCAGCTTTGCCTTTGGGATGAGAAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455895.7
3UTR CCA 72 bp TTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTaGCCGGGATTTAGAGAGCCCCTTCCCAGGTGTGAG +
Preference number: 3 (lower is better)
Translates to: LGHPIVGTSQSF*PGFREPLPRCE
Trigger: CTCACACCTGGGAAGGGGCTCTCTAAATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
3UTR CCA 72 bp ACTCTACATCTTCCAGCTCCCCGGAGGCATCCACTTTaGAAAGTGCCATCTGCACCTCCTCTTCAGTCATGT +
Preference number: 3 (lower is better)
Translates to: TLHLPAPRRHPL*KVPSAPPLQSC
Trigger: ACATGACTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGCTGGAAGATGTAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444377.5
3UTR GCA 72 bp AATTCCCAGCTCAAGTCTCCCCACGGAACGTTTTCTTaGTTTGTTCCTACTCTTGGCCTGCTGTCGGCTAAG +
Preference number: 3 (lower is better)
Translates to: NSQLKSPHGTFS*FVPTLGLLSAK
Trigger: CTTAGCCGACAGCAGGCCAAGAGTAGGAACAAAGCAAGAAAACGTTCCGTGGGGAGACTTGAGCTGGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR CCA 72 bp GTCTGGGTTGCAGCCTCAGTCCTGTCACTTATTAGCTaGGAGAGCTTTGGACTGTTCCAGCCTCTCAATCTA +
Preference number: 3 (lower is better)
Translates to: VWVAASVLSLIS*ESFGLFQPLNL
Trigger: TAGATTGAGAGGCTGGAACAGTCCAAAGCTCTCCCAGCTAATAAGTGACAGGACTGAGGCTGCAACCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR CCA 72 bp ACAGAGTATGTTGTCTCAGCTTCCTCCGAGAGAGACTaGTGGTTTAGCTTCTGTCTACACAGGCAGAAGGGC +
Preference number: 3 (lower is better)
Translates to: TEYVVSASSERD*WFSFCLHRQKG
Trigger: GCCCTTCTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGACAACATACTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR TCA 72 bp GAAGCTAGGCTTACCAGAGTTGTAAGTACTCGGCTTTaGTCACCGCTCTGTACCGCTGGTAGCTGTTTTGTG +
Preference number: 3 (lower is better)
Translates to: EARLTRVVSTRL*SPLCTAGSCFV
Trigger: CACAAAACAGCTACCAGCGGTACAGAGCGGTGATCAAAGCCGAGTACTTACAACTCTGGTAAGCCTAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR GCA 72 bp ACGGAACGTTTTCTTGCTTTGTTCCTACTCTTGGCCTaGTGTCGGCTAAGCCCTGGTATAGCAGGTTCTAGA +
Preference number: 3 (lower is better)
Translates to: TERFLALFLLLA*CRLSPGIAGSR
Trigger: TCTAGAACCTGCTATACCAGGGCTTAGCCGACAGCAGGCCAAGAGTAGGAACAAAGCAAGAAAACGTTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR CCA 72 bp AAGACCAGTGTAATCAAGGGCAAGTTACTTAGTCTTTaGGTGAATGGAGGCCACTGCCTGAGTGGCACTGTG +
Preference number: 3 (lower is better)
Translates to: KTSVIKGKLLSL*VNGGHCLSGTV
Trigger: CACAGTGCCACTCAGGCAGTGGCCTCCATTCACCCAAAGACTAAGTAACTTGCCCTTGATTACACTGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR CCA 72 bp GGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTaGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCT +
Preference number: 3 (lower is better)
Translates to: GSSGEEDRFPLP*VILLLAQVRVS
Trigger: AGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
3UTR CCA 72 bp TCAACTGAAGTCACCAGATTCTCTTCACAGGGGCTCTaGGGGCCAGGTTCTCCTTCAGGGAATGTAGAAATT +
Preference number: 3 (lower is better)
Translates to: STEVTRFSSQGL*GPGSPSGNVEI
Trigger: AATTTCTACATTCCCTGAAGGAGAACCTGGCCCCCAGAGCCCCTGTGAAGAGAATCTGGTGACTTCAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR TCA 72 bp GGAATGGGTTTTGTGGGGTTTATCACTAATGTCTCCTaGGTGCTGGTCACCATGTCTCAGGCAATAGCCCTA +
Preference number: 3 (lower is better)
Translates to: GMGFVGFITNVS*VLVTMSQAIAL
Trigger: TAGGGCTATTGCCTGAGACATGGTGACCAGCACTCAGGAGACATTAGTGATAAACCCCACAAAACCCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR TCA 72 bp TGTGGTTCTTATGTGACAGTGGAACTAACGCTGACATaGATCAGATGTCTGGGTTGCAGCCTCAGTCCTGTC +
Preference number: 3 (lower is better)
Translates to: CGSYVTVELTLT*IRCLGCSLSPV
Trigger: GACAGGACTGAGGCTGCAACCCAGACATCTGATTCATGTCAGCGTTAGTTCCACTGTCACATAAGAACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR TCA 72 bp TCATGTCCAAGTCAAAGTCTTTCTCCCAGTCCTCACTaGTGTCCGTGCTTGAGCCTTTCTTTCCATTGTTGG +
Preference number: 3 (lower is better)
Translates to: SCPSQSLSPSPH*CPCLSLSFHCW
Trigger: CCAACAATGGAAAGAAAGGCTCAAGCACGGACATCAGTGAGGACTGGGAGAAAGACTTTGACTTGGACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR GCA 72 bp GAGAGTCCCAAGAGAGGCAAATTTCCCAGAGATAAGTaGCTCTTACCCACTGGGATAGGAACCAAAATGTGT +
Preference number: 3 (lower is better)
Translates to: ESPKRGKFPRDK*LLPTGIGTKMC
Trigger: ACACATTTTGGTTCCTATCCCAGTGGGTAAGAGGCACTTATCTCTGGGAAATTTGCCTCTCTTGGGACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR CCA 72 bp CACCATGTCTCAGGCAATAGCCCTAAGGTGTCTACATaGATCACCTCATTACAGCTTATAGCCAGGTCTTAT +
Preference number: 3 (lower is better)
Translates to: HHVSGNSPKVST*ITSLQLIARSY
Trigger: ATAAGACCTGGCTATAAGCTGTAATGAGGTGATCCATGTAGACACCTTAGGGCTATTGCCTGAGACATGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR GCA 90 bp AGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTCCTGCTCTCTGTTCCGCCCGCTaGTTCAGGGCGTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RCSVPPAASGRPSGPAPALCSAR*FRASLR
Trigger: CCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAG...AGCAGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR GCA 90 bp GAGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTCCTGCCCCGGATGGAGGGGCTaGCTACAAGGAGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: EMLCSARCFRASLRACSCPGWRG*LQGALR
Trigger: TCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGG...GCAGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR TCA 90 bp GAGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTCCTGCTGGCCAGGCTGGTCTTaGACTCCTCGCCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: EMLCSARCFRASLRACSCWPGWS*TPRLKQ
Trigger: TTGCTTGAGGCGAGGAGTTCAAGACCAGCCTGGCCA...GCAGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR GCA 90 bp CAGAGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTCCTCCCGGATGGAGGGGCTaGCTACAAGGAGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QRCSVPPAASGRPSGPAPPGWRG*LQGALR
Trigger: TCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGG...AGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CCA 90 bp AGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTCCTGCTTGTAGAGGGCCCGGATaGAGGGGCTGCCTACAAGGA +
Preference number: 4 (lower is better)
Translates to: RCSVPPAASGRPSGPAPACRGPG*RGCLQG
Trigger: TCCTTGTAGGCAGCCCCTCCATCCGGGCCCTCTACA...AGCAGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CCA 90 bp CAGGGCTGGGCTGAGACGAGCGAGGGAGGCGAGAGATGCCATGGGTGGGGGAGCTCTTCACAGGGGCTCTaGGGGCCAGGTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QGWAETSEGGERCHGWGSSSQGL*GPGSPS
Trigger: TGAAGGAGAACCTGGCCCCCAGAGCCCCTGTGAAGA...GCTCCCCCACCCATGGCATCTCTCGCCTCCCTCGCTCGTCTCAGCCCAGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp GAGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTCCTGCTGGGTGAAATGCCCATaGGCTCCTCTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EMLCSARCFRASLRACSCWVKCP*APLPPP
Trigger: AGGAGGAGGAAGAGGAGCTCATGGGCATTTCACCCA...GCAGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR GCA 90 bp AGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTCCTGCTCATAGGGCTCAGCTGTaGCAGACGGTGTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: RCSVPPAASGRPSGPAPAHRAQL*QTVCPS
Trigger: TGATGGGCACACCGTCTGGCACAGCTGAGCCCTATG...AGCAGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR GCA 90 bp CAGGGCTGGGCTGAGACGAGCGAGGGAGGCGAGAGATGCCATGGGTGGGGGAGCAGCCACCAGAATCTGTaGCCAGAGCTCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QGWAETSEGGERCHGWGSSHQNL*PELWLA
Trigger: TGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCT...GCTCCCCCACCCATGGCATCTCTCGCCTCCCTCGCTCGTCTCAGCCCAGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp CAGGGCTGGGCTGAGACGAGCGAGGGAGGCGAGAGATGCCATGGGTGGGGGAGCCCCCTTCCGCCATCTTaGCTGCATGACATCACCACT +
Preference number: 4 (lower is better)
Translates to: QGWAETSEGGERCHGWGSPLPPS*LHDITT
Trigger: AGTGGTGATGTCATGCAGGCAAGATGGCGGAAGGGG...GCTCCCCCACCCATGGCATCTCTCGCCTCCCTCGCTCGTCTCAGCCCAGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000419121.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CAGAGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTCCTCTGCTGGAACCATCTTaGTGTAGAGGGCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: QRCSVPPAASGRPSGPAPLLEPS*CRGPGW
Trigger: CCATCCGGGCCCTCTACACCAAGATGGTTCCAGCAG...AGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR TCA 90 bp CAGGGCTGGGCTGAGACGAGCGAGGGAGGCGAGAGATGCCATGGGTGGGGGAGCCCGATGCCAGAATTCTaGATGGGAAACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QGWAETSEGGERCHGWGSPMPEF*MGNSCW
Trigger: CCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGG...GCTCCCCCACCCATGGCATCTCTCGCCTCCCTCGCTCGTCTCAGCCCAGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp CAGGGCTGGGCTGAGACGAGCGAGGGAGGCGAGAGATGCCATGGGTGGGGGAGCATCCCACCCCCTCACTaGAGGTTTGAAGTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: QGWAETSEGGERCHGWGSIPPPH*RFEVEV
Trigger: CACTTCCACTTCAAACCTTCAGTGAGGGGGTGGGAT...GCTCCCCCACCCATGGCATCTCTCGCCTCCCTCGCTCGTCTCAGCCCAGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp CTTCAGAGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTAGGGGCAAAGGTGTCTaGGATCACCCAGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LQRCSVPPAASGRPSGPARGKGV*DHPASF
Trigger: GAAGCTGGCTGGGTGATCTCAGACACCTTTGCCCCT...AGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCTCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR GCA 90 bp GAGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTCCTGCGGGAGATGCTCTCACTaGTCTCTGATGGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: EMLCSARCFRASLRACSCGRCSH*SLMESP
Trigger: AGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCC...GCAGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR GCA 90 bp GCCCGGATGGAGGGGCTGCCTACAAGGAGCTCTGAGATCTCCCCCTTCTTCTCCCACTCGTGCCTCAGGTaGAGTGGCCGGGTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: ARMEGLPTRSSEISPFFSHSCLR*SGRVGD
Trigger: ATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTG...GGAGAAGAAGGGGGAGATCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp TCCTCCCAGCCGGGCTCTTCAGAGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGCTGCTGGAACCATCTTaGTGTAGAGGGCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: SSQPGSSEMLCSARCFRALLEPS*CRGPGW
Trigger: CCATCCGGGCCCTCTACACCAAGATGGTTCCAGCAG...CGCCCTGAAGCAGCGGGCGGAACAGAGCATCTCTGAAGAGCCCGGCTGGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CCA 90 bp GCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATCTGGGCCGCCGGTGTaGCCAGCAGGCGTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: ATRICAQSSGWQRRFGGTSGPPV*PAGVRG
Trigger: GCCCCTAACGCCTGCTGGCCACACCGGCGGCCCAGA...TGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGATCTGGGCCGCCGGTGTaGCCAGCAGGCGTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: GRGDLGEHSQSSRAGLRRSGPPV*PAGVRG
Trigger: GCCCCTAACGCCTGCTGGCCACACCGGCGGCCCAGA...TCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp AGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGGCCCCTTCCCAGGTGTaGGCAGAGGCCCAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: RGDLGEHSQSSRAGLRRAAPSQV*AEAQEG
Trigger: GCCCTCTTGGGCCTCTGCTCACACCTGGGAAGGGGC...CGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGGCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: GDLGEHSQSSRAGLRRARHAGRG*DGTGRV
Trigger: GACACGGCCTGTACCATCGCAGCCACGGCCAGCGTG...CCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp CTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGCTCTGTTCCGCCCGCTaGTTCAGGGCGTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LVGRGDLGEHSQSSRAGLLCSAR*FRASLR
Trigger: CCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAG...CAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGGGAGGGAGGCGAGAGATaGCATGGGTGGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GDLGEHSQSSRAGLRRAREGGER*HGWGSC
Trigger: GCAGCTCCCCCACCCATGGCATCTCTCGCCTCCCTC...CCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TGCAGCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCGTGCCTCAGGTGCAGTaGCCGGGTTGGCGATCTGTG +
Preference number: 4 (lower is better)
Translates to: CSPSFPQRCSFTRVEGESVPQVQ*PGWRSV
Trigger: CACAGATCGCCAACCCGGCCACTGCACCTGAGGCAC...GCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAGGCGAGAGATGCCATaGGTGGGGGAGCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GSHQNLCPELWLAEEIWGRREMP*VGELLP
Trigger: AGGGAGCAGCTCCCCCACCCATGGCATCTCTCGCCT...CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp GAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGCCCCTTCCCAGGTGTaGGCAGAGGCCCAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: ELWLAEEIWGNILSLPGLAPSQV*AEAQEG
Trigger: GCCCTCTTGGGCCTCTGCTCACACCTGGGAAGGGGC...CAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp AGTGCAGAGATGGCCTCCCGACTCCTTGTCCCAGTGAGAGGCCTGTTGCGAGCCCAGGCCGTGTCATGCTaGACCACCTGGGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: SAEMASRLLVPVRGLLRAQAVSC*TTWVNS
Trigger: GGAGTTTACCCAGGTGGTGCAGCATGACACGGCCTG...GGCTCGCAACAGGCCTCTCACTGGGACAAGGAGTCGGGAGGCCATCTCTGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR GCA 90 bp CAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: QRRFGGTFSVFQGWAETSHAGRG*DGTGRV
Trigger: GACACGGCCTGTACCATCGCAGCCACGGCCAGCGTG...GCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp GAATGGAGGCCACTGCCTGAGTGGCACTGTGGCCAAAAGCAGAGGTGGCAGTGGCCCGGATGGAGGGGCTaGCTACAAGGAGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: EWRPLPEWHCGQKQRWQWPGWRG*LQGALR
Trigger: TCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGG...CCACTGCCACCTCTGCTTTTGGCCACAGTGCCACTCAGGCAGTGGCCTCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR GCA 90 bp AAATGTGTTCACTGTCCCTGTTTAGCCAAGGGTAGGTGGCATGGCCCTCCCTGCCTCTGTTCCGCCCGCTaGTTCAGGGCGTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: KCVHCPCLAKGRWHGPPCLCSAR*FRASLR
Trigger: CCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAG...GCAGGGAGGGCCATGCCACCTACCCTTGGCTAAACAGGGACAGTGAACACATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp CAGGGCTGGGCTGAGACGAGCGAGGGAGGCGAGAGATGCCATGGGTGGGGGAGCATCCACTTTGGAAAGTaGCATCTGCACCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QGWAETSEGGERCHGWGSIHFGK*HLHLLF
Trigger: GAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGAT...GCTCCCCCACCCATGGCATCTCTCGCCTCCCTCGCTCGTCTCAGCCCAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGACATGGGTGGGGGAGCTaGTCCCTCTGGCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GRGDLGEHSQSSRAGLRRHGWGS*SLWLPH
Trigger: GTGAGGGAGCCAGAGGGAGCAGCTCCCCCACCCATG...TCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp ACAGGGGAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACCATGGGTGGGGGAGCTaGTCCCTCTGGCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: TGELRWVAGWTRYPARQHHGWGS*SLWLPH
Trigger: GTGAGGGAGCCAGAGGGAGCAGCTCCCCCACCCATG...GTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTCCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp CAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGGGAGGCGAGAGATaGCATGGGTGGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QRRFGGTFSVFQGWAETSEGGER*HGWGSC
Trigger: GCAGCTCCCCCACCCATGGCATCTCTCGCCTCCCTC...GCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp AGCTGGGCTAAGGACTTGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGCATGGAGGGAGGCGAGAGATaGCATGGGTGGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SWAKDLGASDMKKPWEGMEGGER*HGWGSC
Trigger: GCAGCTCCCCCACCCATGGCATCTCTCGCCTCCCTC...CATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp CTGACCCACCAGGCCCACTCACCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTTCACAGGGGCTCTaGGGGCCAGGTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LTHQAHSPPRRHPLWKVPSSQGL*GPGSPS
Trigger: TGAAGGAGAACCTGGCCCCCAGAGCCCCTGTGAAGA...TGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGTGAGTGGGCCTGGTGGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp AGGTTGCTGGGTCCGACTGCAGGCTATAGAGGCGAGCCTTGGTGCCATCATAGGGTGCAGTGGCCGGGTTaGCGATCTGTGTCACGAGGG +
Preference number: 4 (lower is better)
Translates to: RLLGPTAGYRGEPWCHHRVQWPG*RSVSRG
Trigger: CCCTCGTGACACAGATCGCCAACCCGGCCACTGCAC...CCTATGATGGCACCAAGGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp GGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAGTGCAGTGGCCGGGTTaGCGATCTGTGTCACGAGGG +
Preference number: 4 (lower is better)
Translates to: GATRICAQSSGWQRRFGGVQWPG*RSVSRG
Trigger: CCCTCGTGACACAGATCGCCAACCCGGCCACTGCAC...TCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGGGTGCCTCAGGTGCAGTaGCCGGGTTGGCGATCTGTG +
Preference number: 4 (lower is better)
Translates to: GDLGEHSQSSRAGLRRARVPQVQ*PGWRSV
Trigger: CACAGATCGCCAACCCGGCCACTGCACCTGAGGCAC...CCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTCTGGGCCGCCGGTGTaGCCAGCAGGCGTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: PLPWVILLLAQVRVSGRDSGPPV*PAGVRG
Trigger: GCCCCTAACGCCTGCTGGCCACACCGGCGGCCCAGA...ATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
3UTR CAA 72 bp GCGAACTCCTGCAGGTGGCACAGCTGGGCTAAGGACTaGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: ANSCRWHSWAKD*GASDMKKPWEG
Trigger: GCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCTGTGCCACCTGCAGGAGTTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR CAA 72 bp TTGGGTAGCACTCGTGCCTCAGGTGCAGTGGCCGGGTaGGCGATCTGTGTCACGAGGGAGATGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: LGSTRASGAVAG*AICVTREMLSL
Trigger: CAGTGAGAGCATCTCCCTCGTGACACAGATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTGCTACCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
3UTR CAA 72 bp TCCAAGGATGCCTCTAGCAGCTTTTGGGACAGGTCCTaGGGTAGCACTCGTGCCTCAGGTGCAGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SKDASSSFWDRS*GSTRASGAVAG
Trigger: CCCGGCCACTGCACCTGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAAAGCTGCTAGAGGCATCCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR TCA 90 bp GTAGGTGGCATGGCCCTCCCTGCCTGCTTATGTATGGACAGAGTATGTTGTCTCGCCCCTTCCCAGGTGTaGGCAGAGGCCCAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: VGGMALPACLCMDRVCCLAPSQV*AEAQEG
Trigger: GCCCTCTTGGGCCTCTGCTCACACCTGGGAAGGGGC...GAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCCATGCCACCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp CCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGGCCCCTTCCCAGGTGTaGGCAGAGGCCCAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PQEQWVFSRKTQALLVRRAPSQV*AEAQEG
Trigger: GCCCTCTTGGGCCTCTGCTCACACCTGGGAAGGGGC...CCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp TCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGCTCTCTCGGTGTCCCTaGCCCACGATCCCTTTCACT +
Preference number: 4 (lower is better)
Translates to: SWGGEETQERTPAGGTAGLSRCP*PTIPFT
Trigger: AGTGAAAGGGATCGTGGGTCAGGGACACCGAGAGAG...CCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp AGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGCAGCCAGCTTCTCCTTaGCCACGCTGGCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSGWQRRFGGTFSVFQGWQPASP*PRWPWL
Trigger: CAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTG...CCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419121.6
CDS-3UTR GCA 90 bp TTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGCTCTGTTCCGCCCGCTaGTTCAGGGCGTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: FLSLGSSYCWHKSEFLAGLCSAR*FRASLR
Trigger: CCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAG...CCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp CCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGCTCTGTTCCGCCCGCTaGTTCAGGGCGTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PQEQWVFSRKTQALLVRRLCSAR*FRASLR
Trigger: CCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAG...CCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp CTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCTCTGTTCCGCCCGCTaGTTCAGGGCGTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LCPELWLAEEIWGNILSLLCSAR*FRASLR
Trigger: CCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAG...AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp AGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGCGGGCTCTTCAGAGATaGTCTGTTCCGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: REPPESVPRALVGRGDLGRALQR*SVPPAA
Trigger: AGCAGCGGGCGGAACAGAGCATCTCTGAAGAGCCCG...CCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCACTCGTGCCTCAGGTaGAGTGGCCGGGTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: ALVGRGDLGEHSQSSRAGHSCLR*SGRVGD
Trigger: ATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTG...CCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAGTGAATGGAGGCCACTaGCTGAGTGGCACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GATRICAQSSGWQRRFGGVNGGH*LSGTVA
Trigger: GGCCACAGTGCCACTCAGGCAGTGGCCTCCATTCAC...TCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR GCA 90 bp TCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTCATGGGTGGGGGAGCTaGTCCCTCTGGCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SGWQRRFGGTFSVFQGWAHGWGS*SLWLPH
Trigger: GTGAGGGAGCCAGAGGGAGCAGCTCCCCCACCCATG...AGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp TCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGCTCTCCAGAGATTCCTaGAGCCCCTCATTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SWGGEETQERTPAGGTAGLSRDS*SPSFPQ
Trigger: CTGGGGGAATGAGGGGCTGCAGGAATCTCTGGAGAG...CCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp AGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGTGTAGAGGGCCCGGATaGAGGGGCTGCCTACAAGGA +
Preference number: 4 (lower is better)
Translates to: REPPESVPRALVGRGDLGCRGPG*RGCLQG
Trigger: TCCTTGTAGGCAGCCCCTCCATCCGGGCCCTCTACA...CCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp AGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGGTGCCTCAGGTGCAGTaGCCGGGTTGGCGATCTGTG +
Preference number: 4 (lower is better)
Translates to: RGDLGEHSQSSRAGLRRAVPQVQ*PGWRSV
Trigger: CACAGATCGCCAACCCGGCCACTGCACCTGAGGCAC...CGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGATCTGGGCCGCCGGTGTaGCCAGCAGGCGTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: SQLPPRETGGLASVYTGRSGPPV*PAGVRG
Trigger: GCCCCTAACGCCTGCTGGCCACACCGGCGGCCCAGA...TCTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp AGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGGCGAGAGATGCCATaGGTGGGGGAGCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RGDLGEHSQSSRAGLRRARREMP*VGELLP
Trigger: AGGGAGCAGCTCCCCCACCCATGGCATCTCTCGCCT...CGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCACAAAGGCTGAGGCGAGAGATGCCATaGGTGGGGGAGCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: HSPRGAALPEWRVRAQRLRREMP*VGELLP
Trigger: AGGGAGCAGCTCCCCCACCCATGGCATCTCTCGCCT...CAGCCTTTGTGCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp AGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGTCAGTCTTCCAGGGCTaGGCTGAGACGAGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: REPPESVPRALVGRGDLGSVFQG*AETSEG
Trigger: TCCCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGA...CCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CAGGGCTGGGCTGAGACGAGCGAGGGAGGCGAGAGATGCCATGGGTGGGGGAGCTTGGCAGAGGAGATTTaGGGGAACATTCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: QGWAETSEGGERCHGWGSLAEEI*GNILSL
Trigger: AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAA...GCTCCCCCACCCATGGCATCTCTCGCCTCCCTCGCTCGTCTCAGCCCAGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GCAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGCGAACTCCTGCAGGTaGCACAGCTGGGCTAAGGAC +
Preference number: 4 (lower is better)
Translates to: AGSHQNLCPELWLAEEIWANSCR*HSWAKD
Trigger: GTCCTTAGCCCAGCTGTGCCACCTGCAGGAGTTCGC...CCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp GGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGACCAATGTTGTGGGTCTaGGCAGGAAGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GATRICAQSSGWQRRFGGPMLWV*AGSSSS
Trigger: GGAGCTGGAGCTTCCTGCTCAGACCCACAACATTGG...TCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp GGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGCTAAGGACTCCCCAGGCCATACTCTaGGGTCCCACTGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: GEETQERTPAGGTAGLRTPQAIL*GPTESE
Trigger: TTCACTCTCAGTGGGACCTCAGAGTATGGCCTGGGG...AGTCCTTAGCCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp TCCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGCCCCTTCCCAGGTGTaGGCAGAGGCCCAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SSGTVGVQQKNTGSSGEEAPSQV*AEAQEG
Trigger: GCCCTCTTGGGCCTCTGCTCACACCTGGGAAGGGGC...CTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp CCTTCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTACACACAGAAGGGCCTaGAGTAGCCCCCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSWGGEETQERTPAGGTATHRRA*SSPLPS
Trigger: AGAAGGGAGGGGGCTACTTCAGGCCCTTCTGTGTGT...AGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp CTCTGGGGGCCAGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCCAGCCAGCTTCTCCTTaGCCACGCTGGCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LWGPGSPSGNVEILATGTQPASP*PRWPWL
Trigger: CAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTG...GGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCTGGCCCCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR GCA 90 bp AGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGCAGGCCGTGTCATGCTaGACCACCTGGGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: REPPESVPRALVGRGDLGQAVSC*TTWVNS
Trigger: GGAGTTTACCCAGGTGGTGCAGCATGACACGGCCTG...CCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp GGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGGTACAGGCCGTGTCATaGTGCACCACCTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: GSHQNLCPELWLAEEIWGVQAVS*CTTWVN
Trigger: GTTTACCCAGGTGGTGCAGCATGACACGGCCTGTAC...CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp CTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: LCPELWLAEEIWGNILSLHAGRG*DGTGRV
Trigger: GACACGGCCTGTACCATCGCAGCCACGGCCAGCGTG...AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp CACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: HQNLCPELWLAEEIWGNIHAGRG*DGTGRV
Trigger: GACACGGCCTGTACCATCGCAGCCACGGCCAGCGTG...AATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp ACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: TRICAQSSGWQRRFGGTFHAGRG*DGTGRV
Trigger: GACACGGCCTGTACCATCGCAGCCACGGCCAGCGTG...GAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp GCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCCCGGATGGAGGGGCTaGCTACAAGGAGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: ALVGRGDLGEHSQSSRAGPGWRG*LQGALR
Trigger: TCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGG...CCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACACCCGGATGGAGGGGCTaGCTACAAGGAGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: ATRICAQSSGWQRRFGGTPGWRG*LQGALR
Trigger: TCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGG...TGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCCTCTGTTCCGCCCGCTaGTTCAGGGCGTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GEEDRFPLPWVILLLAQVLCSAR*FRASLR
Trigger: CCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAG...GACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp ACCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTGCACCTCCTCTTCAGTCCGGGCTCTTCAGAGATaGTCTGTTCCGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: TSPEASTLESAICTSSSVRALQR*SVPPAA
Trigger: AGCAGCGGGCGGAACAGAGCATCTCTGAAGAGCCCG...GACTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR GCA 90 bp GCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCGGGCTCTTCAGAGATaGTCTGTTCCGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALVGRGDLGEHSQSSRAGRALQR*SVPPAA
Trigger: AGCAGCGGGCGGAACAGAGCATCTCTGAAGAGCCCG...CCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp TCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTCACTCGTGCCTCAGGTaGAGTGGCCGGGTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: SGWQRRFGGTFSVFQGWAHSCLR*SGRVGD
Trigger: ATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTG...AGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTCATGGGTGGGGGAGCTaGTCCCTCTGGCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: RALVGRGDLGEHSQSSRAHGWGS*SLWLPH
Trigger: GTGAGGGAGCCAGAGGGAGCAGCTCCCCCACCCATG...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GTAGGTGGCATGGCCCTCCCTGCCTGCTTATGTATGGACAGAGTATGTTGTCTCCATGGGTGGGGGAGCTaGTCCCTCTGGCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: VGGMALPACLCMDRVCCLHGWGS*SLWLPH
Trigger: GTGAGGGAGCCAGAGGGAGCAGCTCCCCCACCCATG...GAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCCATGCCACCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp TTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGGAGGGAGGCGAGAGATaGCATGGGTGGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FLSLGSSYCWHKSEFLAGEGGER*HGWGSC
Trigger: GCAGCTCCCCCACCCATGGCATCTCTCGCCTCCCTC...CCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TGCAGCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCTCATGCTGCACCACCTaGGTAAACTCCGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: CSPSFPQRCSFTRVEGESSCCTT*VNSVRS
Trigger: GGACCTGACGGAGTTTACCCAGGTGGTGCAGCATGA...GCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGTGGCCGTGGCTGCGATaGTACAGGCCGTGTCATGCT +
Preference number: 4 (lower is better)
Translates to: WQRRFGGTFSVFQGWAETWPWLR*YRPCHA
Trigger: AGCATGACACGGCCTGTACCATCGCAGCCACGGCCA...CGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR CCA 90 bp GGCTGGGGAGAGCTCTCACACCCAGGACCATTAGGCTCGCTTCCCTCTGACCCATATAGAGGCGAGCCTTaGTGCCATCATAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GWGELSHPGPLGSLPSDPYRGEP*CHHRAQ
Trigger: CTGAGCCCTATGATGGCACCAAGGCTCGCCTCTATA...TGGGTCAGAGGGAAGCGAGCCTAATGGTCCTGGGTGTGAGAGCTCTCCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp AGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGTGTAGAGGGCCCGGATaGAGGGGCTGCCTACAAGGA +
Preference number: 4 (lower is better)
Translates to: RGDLGEHSQSSRAGLRRACRGPG*RGCLQG
Trigger: TCCTTGTAGGCAGCCCCTCCATCCGGGCCCTCTACA...CGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp AGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGTGTAGAGGGCCCGGATaGAGGGGCTGCCTACAAGGA +
Preference number: 4 (lower is better)
Translates to: RRFGGTFSVFQGWAETSECRGPG*RGCLQG
Trigger: TCCTTGTAGGCAGCCCCTCCATCCGGGCCCTCTACA...CTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GCAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGTCTTCACAGGGGCTCTaGGGGCCAGGTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AGSHQNLCPELWLAEEIWSSQGL*GPGSPS
Trigger: TGAAGGAGAACCTGGCCCCCAGAGCCCCTGTGAAGA...CCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGATCTTCACAGGGGCTCTaGGGGCCAGGTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GATRICAQSSGWQRRFGGSSQGL*GPGSPS
Trigger: TGAAGGAGAACCTGGCCCCCAGAGCCCCTGTGAAGA...TCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TGCAGCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCTTTGGGACAGGTCCTTaGGTAGCACTCGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CSPSFPQRCSFTRVEGESFGTGP*VALVPQ
Trigger: CTGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAA...GCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp CTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGACACCCGTAAGTCTGTaGGCGCCTCCTCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LVGRGDLGEHSQSSRAGLTPVSL*APPPSE
Trigger: CTCTGAGGGAGGAGGCGCCCACAGACTTACGGGTGT...CAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACAACACCCGTAAGTCTGTaGGCGCCTCCTCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: ATRICAQSSGWQRRFGGTTPVSL*APPPSE
Trigger: CTCTGAGGGAGGAGGCGCCCACAGACTTACGGGTGT...TGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGTCAGTCTTCCAGGGCTaGGCTGAGACGAGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: ALVGRGDLGEHSQSSRAGSVFQG*AETSEG
Trigger: TCCCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGA...CCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGCCCAGAGCTCTGGTTaGCAGAGGAGATTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: QGATRICAQSSGWQRRFGAQSSG*QRRFGG
Trigger: TCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGC...CCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGCTAAGGACTTGCAGGTGGCACAGCTaGGCTAAGGACTTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GEETQERTPAGGTAGLRTCRWHS*AKDLGA
Trigger: TGCACCCAAGTCCTTAGCCCAGCTGTGCCACCTGCA...AGTCCTTAGCCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp AGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGTGCAGGTGGCACAGCTaGGCTAAGGACTTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: REPPESVPRALVGRGDLGCRWHS*AKDLGA
Trigger: TGCACCCAAGTCCTTAGCCCAGCTGTGCCACCTGCA...CCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGGCGAACTCCTGCAGGTaGCACAGCTGGGCTAAGGAC +
Preference number: 4 (lower is better)
Translates to: WQRRFGGTFSVFQGWAETANSCR*HSWAKD
Trigger: GTCCTTAGCCCAGCTGTGCCACCTGCAGGAGTTCGC...CGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp CATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCACAAAGGCTGGTCTCTGGCTCCAAGTaGGAAGCCAGTCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: HSPRGAALPEWRVRAQRLVSGSK*EASPAL
Trigger: CAGGGCAGGACTGGCTTCCCACTTGGAGCCAGAGAC...CAGCCTTTGTGCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR TCA 90 bp GCAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGTGGGTGAAATGCCCATaGGCTCCTCTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AGSHQNLCPELWLAEEIWWVKCP*APLPPP
Trigger: AGGAGGAGGAAGAGGAGCTCATGGGCATTTCACCCA...CCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp GCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCACAATGGGTGAAATGCCCATaGGCTCCTCTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: APHSPRGAALPEWRVRAQWVKCP*APLPPP
Trigger: AGGAGGAGGAAGAGGAGCTCATGGGCATTTCACCCA...TTGTGCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp GGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGTGCTGGGGGCTCAACTaGAGTCACCAGATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GSHQNLCPELWLAEEIWGCWGLN*SHQILF
Trigger: GAAGAGAATCTGGTGACTTCAGTTGAGCCCCCAGCA...CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp AGGTTGCTGGGTCCGACTGCAGGCTATAGAGGCGAGCCTTGGTGCCATCATAGGTCTCCCAGTCCTCACTaGTGTCCGTGCTTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RLLGPTAGYRGEPWCHHRSPSPH*CPCLSL
Trigger: AAGGCTCAAGCACGGACATCAGTGAGGACTGGGAGA...CCTATGATGGCACCAAGGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR TCA 90 bp GGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGGTCTCCCAGTCCTCACTaGTGTCCGTGCTTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GDLGEHSQSSRAGLRRARSPSPH*CPCLSL
Trigger: AAGGCTCAAGCACGGACATCAGTGAGGACTGGGAGA...CCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp GCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGAGGCTCGCTTCCCTCTaGCCCACCAGGCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: ALLVRRIGFLSLGSSYCWRLASL*PTRPTH
Trigger: GTGAGTGGGCCTGGTGGGTCAGAGGGAAGCGAGCCT...CCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp CATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCACAAAGGCTGACCAGAGCAGCATCGTaGAGCACCAGGCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HSPRGAALPEWRVRAQRLTRAAS*STRLSR
Trigger: TCTGGAGAGCCTGGTGCTTCACGATGCTGCTCTGGT...CAGCCTTTGTGCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp AGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGCTTCTCTGTTGCTCCTaGGGAGCCTTCCGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RGDLGEHSQSSRAGLRRALLCCS*GAFRSQ
Trigger: CTGGCTACGGAAGGCTCCTCAGGAGCAACAGAGAAG...CGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp GGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGACTTCTCTGTTGCTCCTaGGGAGCCTTCCGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GRGDLGEHSQSSRAGLRRLLCCS*GAFRSQ
Trigger: CTGGCTACGGAAGGCTCCTCAGGAGCAACAGAGAAG...TCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp CAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGAAGGGACTCCTTGTCCCAGTaGGAGGCCTGTTGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: QLPPRETGGLASVYTGRRDSLSQ*EACCEP
Trigger: GGGCTCGCAACAGGCCTCTCACTGGGACAAGGAGTC...CCTTCTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR GCA 90 bp AGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGCAGGCCGTGTCATGCTaGACCACCTGGGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: RRFGGTFSVFQGWAETSEQAVSC*TTWVNS
Trigger: GGAGTTTACCCAGGTGGTGCAGCATGACACGGCCTG...CTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp CAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGTACAGGCCGTGTCATaGTGCACCACCTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: QGATRICAQSSGWQRRFGVQAVS*CTTWVN
Trigger: GTTTACCCAGGTGGTGCAGCATGACACGGCCTGTAC...CCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp ACCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTGCACCTCCTCTTCAGTCAGAGGCGAGCCTTGGTaGCATCATAGGGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TSPEASTLESAICTSSSVRGEPW*HHRAQL
Trigger: CAGCTGAGCCCTATGATGGCACCAAGGCTCGCCTCT...GACTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR GCA 90 bp GGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAAGAGGCGAGCCTTGGTaGCATCATAGGGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GRGDLGEHSQSSRAGLRRRGEPW*HHRAQL
Trigger: CAGCTGAGCCCTATGATGGCACCAAGGCTCGCCTCT...TCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp TGCAGCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCGGGAGATGCTCTCACTaGTCTCTGATGGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: CSPSFPQRCSFTRVEGESGRCSH*SLMESP
Trigger: AGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCC...GCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp TGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCACTCGTGCCTCAGGTaGAGTGGCCGGGTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: CAQSSGWQRRFGGTFSVFHSCLR*SGRVGD
Trigger: ATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTG...GAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp CCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGCACTCGTGCCTCAGGTaGAGTGGCCGGGTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: PQEQWVFSRKTQALLVRRHSCLR*SGRVGD
Trigger: ATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTG...CCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp AGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGCATGGGTGGGGGAGCTaGTCCCTCTGGCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SRKTQALLVRRIGFLSLGHGWGS*SLWLPH
Trigger: GTGAGGGAGCCAGAGGGAGCAGCTCCCCCACCCATG...CCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGAGGGAGGCGAGAGATaGCATGGGTGGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSSGEEDRFPLPWVILLLEGGER*HGWGSC
Trigger: GCAGCTCCCCCACCCATGGCATCTCTCGCCTCCCTC...CAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GCTAAGGACTTGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGCATGGGGACACTCTCCAGAGATTCCTaGAGCCCCTCATTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: AKDLGASDMKKPWEGMGTLSRDS*SPSFPQ
Trigger: CTGGGGGAATGAGGGGCTGCAGGAATCTCTGGAGAG...TGTCCCCATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp AGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGCCCCTTCCGCCATCTTaGCTGCATGACATCACCACT +
Preference number: 4 (lower is better)
Translates to: REPPESVPRALVGRGDLGPLPPS*LHDITT
Trigger: AGTGGTGATGTCATGCAGGCAAGATGGCGGAAGGGG...CCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419121.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGTTCCGGGGGCCCATCTaGTTCATTACAGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: GSHQNLCPELWLAEEIWGFRGPI*FITVGC
Trigger: GCAACCTACTGTAATGAACCAGATGGGCCCCCGGAA...CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGTGTAGAGGGCCCGGATaGAGGGGCTGCCTACAAGGA +
Preference number: 4 (lower is better)
Translates to: ELWLAEEIWGNILSLPGLCRGPG*RGCLQG
Trigger: TCCTTGTAGGCAGCCCCTCCATCCGGGCCCTCTACA...CAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTTGTAGAGGGCCCGGATaGAGGGGCTGCCTACAAGGA +
Preference number: 4 (lower is better)
Translates to: SGWQRRFGGTFSVFQGWACRGPG*RGCLQG
Trigger: TCCTTGTAGGCAGCCCCTCCATCCGGGCCCTCTACA...AGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCACAAAGGCTGCTGCTGGAACCATCTTaGTGTAGAGGGCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: HSPRGAALPEWRVRAQRLLLEPS*CRGPGW
Trigger: CCATCCGGGCCCTCTACACCAAGATGGTTCCAGCAG...CAGCCTTTGTGCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGGTGCAGTGGCCGGGTTaGCGATCTGTGTCACGAGGG +
Preference number: 4 (lower is better)
Translates to: FLSLGSSYCWHKSEFLAGVQWPG*RSVSRG
Trigger: CCCTCGTGACACAGATCGCCAACCCGGCCACTGCAC...CCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGCATGGCCCTCCCTGCCTGCTTATGTATGGACAGAGTATGTTGTCTCAGCTTCGTGCAGTGGCCGGGTTaGCGATCTGTGTCACGAGGG +
Preference number: 4 (lower is better)
Translates to: GMALPACLCMDRVCCLSFVQWPG*RSVSRG
Trigger: CCCTCGTGACACAGATCGCCAACCCGGCCACTGCAC...GAAGCTGAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACACAGAAGTGCAGTGGCCGGGTTaGCGATCTGTGTCACGAGGG +
Preference number: 4 (lower is better)
Translates to: ELRWVAGWTRYPARQHTEVQWPG*RSVSRG
Trigger: CCCTCGTGACACAGATCGCCAACCCGGCCACTGCAC...TTCTGTGTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp CAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGTTTGGGACAGGTCCTTaGGTAGCACTCGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QGATRICAQSSGWQRRFGFGTGP*VALVPQ
Trigger: CTGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAA...CCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp AGTCCCAAGAGAGGCAAATTTCCCAGAGATAAGTGCCTCTTACCCACTGGGATATCTGGGCCGCCGGTGTaGCCAGCAGGCGTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: SPKRGKFPRDKCLLPTGISGPPV*PAGVRG
Trigger: GCCCCTAACGCCTGCTGGCCACACCGGCGGCCCAGA...TATCCCAGTGGGTAAGAGGCACTTATCTCTGGGAAATTTGCCTCTCTTGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGGCCGCCGGTGTaGCCAGCAGGCGTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: EDRFPLPWVILLLAQVRVSGPPV*PAGVRG
Trigger: GCCCCTAACGCCTGCTGGCCACACCGGCGGCCCAGA...AACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TTGGCGATCTGTGTCACGAGGGAGATGCTCTCACTGCTCTCTGATGGAGTCACCACACCCGTAAGTCTGTaGGCGCCTCCTCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LAICVTREMLSLLSDGVTTPVSL*APPPSE
Trigger: CTCTGAGGGAGGAGGCGCCCACAGACTTACGGGTGT...GGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp GGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGCGGAGGCATCCACTTTaGAAAGTGCCATCTGCACCT +
Preference number: 4 (lower is better)
Translates to: GSHQNLCPELWLAEEIWGRRHPL*KVPSAP
Trigger: AGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCG...CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGCGGAGGCATCCACTTTaGAAAGTGCCATCTGCACCT +
Preference number: 4 (lower is better)
Translates to: SWGGEETQERTPAGGTAGRRHPL*KVPSAP
Trigger: AGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCG...CCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp AGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGGCCCAGAGCTCTGGTTaGCAGAGGAGATTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: RGDLGEHSQSSRAGLRRAAQSSG*QRRFGG
Trigger: TCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGC...CGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACAGCCCAGAGCTCTGGTTaGCAGAGGAGATTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: ATRICAQSSGWQRRFGGTAQSSG*QRRFGG
Trigger: TCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGC...TGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GCAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGCTGTGCCCAGAGCTCTaGTTGGCAGAGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: AGSHQNLCPELWLAEEIWLCPEL*LAEEIW
Trigger: CCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG...CCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGCTAAGGACTGGAATGGAAAATGCCTaGGAGGGGGAGAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: GEETQERTPAGGTAGLRTGMENA*EGESPK
Trigger: CTTGGGACTCTCCCCCTCCCAGGCATTTTCCATTCC...AGTCCTTAGCCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAGAGCCTTTCCAGGAATaGAAAATGCCTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GATRICAQSSGWQRRFGGEPFQE*KMPGRG
Trigger: CCCCCTCCCAGGCATTTTCCATTCCTGGAAAGGCTC...TCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TGCAGCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCGTTGAGGTGGGTAGCTaGTTGGACAAGGTATCCTGC +
Preference number: 4 (lower is better)
Translates to: CSPSFPQRCSFTRVEGESVEVGS*LDKVSC
Trigger: GCAGGATACCTTGTCCAACCAGCTACCCACCTCAAC...GCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGGCAGCTTTACCAGAGTaGAGGGTGAGAGCACAAAGG +
Preference number: 4 (lower is better)
Translates to: SWGGEETQERTPAGGTAGAALPE*RVRAQR
Trigger: CCTTTGTGCTCTCACCCTCCACTCTGGTAAAGCTGC...CCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAAGCGGAGAAGCACTTTaGCCCAGAGGCTCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: GATRICAQSSGWQRRFGGSGEAL*PRGSKR
Trigger: TCTCTTGGAGCCTCTGGGCCAAAGTGCTTCTCCGCT...TCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444377.5
3UTR CAA 72 bp ATGGCCTCCCGACTCCTTGTCCCAGTGAGAGGCCTGTaGCGAGCCCTGACCCTTTCTCATCCCAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: MASRLLVPVRGL*RALTLSHPKGK
Trigger: TTTGCCTTTGGGATGAGAAAGGGTCAGGGCTCGCAACAGGCCTCTCACTGGGACAAGGAGTCGGGAGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR TCA 90 bp CAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCTGGGTGAAATGCCCATaGGCTCCTCTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QRRFGGTFSVFQGWAETSWVKCP*APLPPP
Trigger: AGGAGGAGGAAGAGGAGCTCATGGGCATTTCACCCA...GCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp AGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGTGCTGGGGGCTCAACTaGAGTCACCAGATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: REPPESVPRALVGRGDLGCWGLN*SHQILF
Trigger: GAAGAGAATCTGGTGACTTCAGTTGAGCCCCCAGCA...CCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp AGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGTCTCCCAGTCCTCACTaGTGTCCGTGCTTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RRFGGTFSVFQGWAETSESPSPH*CPCLSL
Trigger: AAGGCTCAAGCACGGACATCAGTGAGGACTGGGAGA...CTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp GCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATCTCCCAGTCCTCACTaGTGTCCGTGCTTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: ATRICAQSSGWQRRFGGTSPSPH*CPCLSL
Trigger: AAGGCTCAAGCACGGACATCAGTGAGGACTGGGAGA...TGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp AAATGTGTTCACTGTCCCTGTTTAGCCAAGGGTAGGTGGCATGGCCCTCCCTGCACACACAGAAGGGCCTaGAGTAGCCCCCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KCVHCPCLAKGRWHGPPCTHRRA*SSPLPS
Trigger: AGAAGGGAGGGGGCTACTTCAGGCCCTTCTGTGTGT...GCAGGGAGGGCCATGCCACCTACCCTTGGCTAAACAGGGACAGTGAACACATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp GCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGACTGATGTCCGTGCTTaGGCCTCGGAAAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ALVGRGDLGEHSQSSRAGTDVRA*ASEKAG
Trigger: ACCTGCCTTTTCCGAGGCTCAAGCACGGACATCAGT...CCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444377.5
CDS-3UTR GCA 90 bp AGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGGTACAGGCCGTGTCATaGTGCACCACCTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: RGDLGEHSQSSRAGLRRAVQAVS*CTTWVN
Trigger: GTTTACCCAGGTGGTGCAGCATGACACGGCCTGTAC...CGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp GGAGTCACCTCTGCTGGGGGCTCAACTGAAGTCACCAGATTCTCTTCACAGGGGGTACAGGCCGTGTCATaGTGCACCACCTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: GVTSAGGSTEVTRFSSQGVQAVS*CTTWVN
Trigger: GTTTACCCAGGTGGTGCAGCATGACACGGCCTGTAC...CCCCTGTGAAGAGAATCTGGTGACTTCAGTTGAGCCCCCAGCAGAGGTGACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR GCA 90 bp CTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGGTACAGGCCGTGTCATaGTGCACCACCTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: LVGRGDLGEHSQSSRAGLVQAVS*CTTWVN
Trigger: GTTTACCCAGGTGGTGCAGCATGACACGGCCTGTAC...CAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp GTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCGCCCCGGGAACAGGCTaGAATAGCCAGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VPRALVGRGDLGEHSQSSAPGTG*NSQLLL
Trigger: AAGGAGAAGCTGGCTATTGCAGCCTGTTCCCGGGGC...GGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341071.11
ENST00000446293.6
CDS-3UTR GCA 90 bp GAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGCATAGGGCTCAGCTGTaGCAGACGGTGTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: ELWLAEEIWGNILSLPGLHRAQL*QTVCPS
Trigger: TGATGGGCACACCGTCTGGCACAGCTGAGCCCTATG...CAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTCCCGGATGGAGGGGCTaGCTACAAGGAGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: RALVGRGDLGEHSQSSRAPGWRG*LQGALR
Trigger: TCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGG...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp TTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGCGGGCTCTTCAGAGATaGTCTGTTCCGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: FLSLGSSYCWHKSEFLAGRALQR*SVPPAA
Trigger: AGCAGCGGGCGGAACAGAGCATCTCTGAAGAGCCCG...CCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp CACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCGGGCTCTTCAGAGATaGTCTGTTCCGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HQNLCPELWLAEEIWGNIRALQR*SVPPAA
Trigger: AGCAGCGGGCGGAACAGAGCATCTCTGAAGAGCCCG...AATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp CAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGTGTCACGAGGGAGATaGTCTCACTGCTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: QGATRICAQSSGWQRRFGVSRGR*SHCSLM
Trigger: CATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACAC...CCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCACAAGTGTCACGAGGGAGATaGTCTCACTGCTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: APHSPRGAALPEWRVRAQVSRGR*SHCSLM
Trigger: CATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACAC...TTGTGCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp GGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGCACTCGTGCCTCAGGTaGAGTGGCCGGGTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: GSSGEEDRFPLPWVILLLHSCLR*SGRVGD
Trigger: ATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTG...CAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAAGCCACCAGAATCTGTaGCCAGAGCTCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GRGDLGEHSQSSRAGLRRSHQNL*PELWLA
Trigger: TGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCT...TCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp TCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGATGGCCCTCCCTGCCTaGTTATGTATGGACAGAGTA +
Preference number: 4 (lower is better)
Translates to: SWGGEETQERTPAGGTAGMALPA*LCMDRV
Trigger: TACTCTGTCCATACATAAGCAGGCAGGGAGGGCCAT...CCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp GGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGATGGCATGGCCCTCCCTaGCTGCTTATGTATGGACAG +
Preference number: 4 (lower is better)
Translates to: GRGDLGEHSQSSRAGLRRWHGPP*LLMYGQ
Trigger: CTGTCCATACATAAGCAGGCAGGGAGGGCCATGCCA...TCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp GCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGTCCAGGAATGGAAAATaGCTGGGAGGGGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: ALVGRGDLGEHSQSSRAGSRNGK*LGGGES
Trigger: GGACTCTCCCCCTCCCAGGCATTTTCCATTCCTGGA...CCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp TGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGCTGGCCCAGTGCAGCTaGCAAGGGGACAAAAACAGA +
Preference number: 4 (lower is better)
Translates to: WQRRFGGTFSVFQGWAETLAQCS*QGDKNR
Trigger: TCTGTTTTTGTCCCCTTGGCAGCTGCACTGGGCCAG...CGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR GCA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTCAGAGGCACTGGGAGTaGAGAGATGGCCTCCCGACT +
Preference number: 4 (lower is better)
Translates to: RALVGRGDLGEHSQSSRAQRHWE*RDGLPT
Trigger: AGTCGGGAGGCCATCTCTGCACTCCCAGTGCCTCTG...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR CCA 90 bp TCACCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTGCACCTCCTCTTCAGTCATGCTGCACCACCTaGGTAAACTCCGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SPPRRHPLWKVPSAPPLQSCCTT*VNSVRS
Trigger: GGACCTGACGGAGTTTACCCAGGTGGTGCAGCATGA...CTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp CTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTTGGCCGTGGCTGCGATaGTACAGGCCGTGTCATGCT +
Preference number: 4 (lower is better)
Translates to: LCPELWLAEEIWGNILSLWPWLR*YRPCHA
Trigger: AGCATGACACGGCCTGTACCATCGCAGCCACGGCCA...AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR CCA 90 bp ACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTGGCCGTGGCTGCGATaGTACAGGCCGTGTCATGCT +
Preference number: 4 (lower is better)
Translates to: TRICAQSSGWQRRFGGTFWPWLR*YRPCHA
Trigger: AGCATGACACGGCCTGTACCATCGCAGCCACGGCCA...GAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR CCA 90 bp AGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGTCGATGGTTTTGTCTaGCGAAGGGGCAAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: REPPESVPRALVGRGDLGVDGFV*RRGKGV
Trigger: GACACCTTTGCCCCTTCGCCAGACAAAACCATCGAC...CCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR CCA 90 bp CCTTCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTTATAGAGGCGAGCCTTaGTGCCATCATAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PSWGGEETQERTPAGGTAYRGEP*CHHRAQ
Trigger: CTGAGCCCTATGATGGCACCAAGGCTCGCCTCTATA...AGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp CCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTGTAGAGGGCCCGGATaGAGGGGCTGCCTACAAGGA +
Preference number: 4 (lower is better)
Translates to: PLPWVILLLAQVRVSGRDCRGPG*RGCLQG
Trigger: TCCTTGTAGGCAGCCCCTCCATCCGGGCCCTCTACA...ATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GCCCGGATGGAGGGGCTGCCTACAAGGAGCTCTGAGATCTCCCCCTTCTTCTCCATGGGAAACAGCTGCTaGAACCATCTTGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: ARMEGLPTRSSEISPFFSMGNSC*NHLGVE
Trigger: CTCTACACCAAGATGGTTCCAGCAGCTGTTTCCCAT...GGAGAAGAAGGGGGAGATCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp CTTCCCCCAACCAACACCAGACACCACAAGGTGATGGCTGCCTACAGGAACCAATCTTCACAGGGGCTCTaGGGGCCAGGTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LPPTNTRHHKVMAAYRNQSSQGL*GPGSPS
Trigger: TGAAGGAGAACCTGGCCCCCAGAGCCCCTGTGAAGA...TTGGTTCCTGTAGGCAGCCATCACCTTGTGGTGTCTGGTGTTGGTTGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CCA 90 bp TCCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGTGCAGTGGCCGGGTTaGCGATCTGTGTCACGAGGG +
Preference number: 4 (lower is better)
Translates to: SSGTVGVQQKNTGSSGEEVQWPG*RSVSRG
Trigger: CCCTCGTGACACAGATCGCCAACCCGGCCACTGCAC...CTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TCCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGTGCCTCAGGTGCAGTaGCCGGGTTGGCGATCTGTG +
Preference number: 4 (lower is better)
Translates to: SSGTVGVQQKNTGSSGEEVPQVQ*PGWRSV
Trigger: CACAGATCGCCAACCCGGCCACTGCACCTGAGGCAC...CTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGAGTGCCTCAGGTGCAGTaGCCGGGTTGGCGATCTGTG +
Preference number: 4 (lower is better)
Translates to: SQLPPRETGGLASVYTGRVPQVQ*PGWRSV
Trigger: CACAGATCGCCAACCCGGCCACTGCACCTGAGGCAC...TCTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp CTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGTTTGGGACAGGTCCTTaGGTAGCACTCGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LVGRGDLGEHSQSSRAGLFGTGP*VALVPQ
Trigger: CTGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAA...CAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp AAGTCACCAGATTCTCTTCACAGGGGCTCTGGGGGCCAGGTTCTCCTTCAGGGATTTGGGACAGGTCCTTaGGTAGCACTCGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KSPDSLHRGSGGQVLLQGFGTGP*VALVPQ
Trigger: CTGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAA...TCCCTGAAGGAGAACCTGGCCCCCAGAGCCCCTGTGAAGAGAATCTGGTGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp AGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGTTTGGGACAGGTCCTTaGGTAGCACTCGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGDLGEHSQSSRAGLRRAFGTGP*VALVPQ
Trigger: CTGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAA...CGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CCCAGCTCAAGTCTCCCCACGGAACGTTTTCTTGCTTTGTTCCTACTCTTGGCCACACCCGTAAGTCTGTaGGCGCCTCCTCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PSSSLPTERFLALFLLLATPVSL*APPPSE
Trigger: CTCTGAGGGAGGAGGCGCCCACAGACTTACGGGTGT...GGCCAAGAGTAGGAACAAAGCAAGAAAACGTTCCGTGGGGAGACTTGAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CCA 90 bp CAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGAAGGTCAGTCTTCCAGGGCTaGGCTGAGACGAGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: QLPPRETGGLASVYTGRRSVFQG*AETSEG
Trigger: TCCCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGA...CCTTCTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGTCAGTCTTCCAGGGCTaGGCTGAGACGAGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: FLSLGSSYCWHKSEFLAGSVFQG*AETSEG
Trigger: TCCCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGA...CCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTTCAGTCTTCCAGGGCTaGGCTGAGACGAGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: HQNLCPELWLAEEIWGNISVFQG*AETSEG
Trigger: TCCCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGA...AATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGTCAGTCTTCCAGGGCTaGGCTGAGACGAGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: VSASSERDWWFSFCLHRQSVFQG*AETSEG
Trigger: TCCCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGA...CTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACACTGTGCCCAGAGCTCTaGTTGGCAGAGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: ATRICAQSSGWQRRFGGTLCPEL*LAEEIW
Trigger: CCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG...TGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp AGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGCTGTGCCCAGAGCTCTaGTTGGCAGAGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: RRFGGTFSVFQGWAETSELCPEL*LAEEIW
Trigger: CCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG...CTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp AGCTGGGCTAAGGACTTGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGCATGCTGTGCCCAGAGCTCTaGTTGGCAGAGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: SWAKDLGASDMKKPWEGMLCPEL*LAEEIW
Trigger: CCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG...CATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TGCAGCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCACAAGTCAGAGTTTCTaGCCGGGATTTAGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: CSPSFPQRCSFTRVEGESTSQSF*PGFREP
Trigger: GGGCTCTCTAAATCCCGGCCAGAAACTCTGACTTGT...GCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCACAAAGGAAAGGAAGGAGGTaGGTCAGGGTTTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: APHSPRGAALPEWRVRAQRKGRR*VRVWSL
Trigger: CAGAGACCAAACCCTGACCCACCTCCTTCCTTTCCT...TTGTGCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGGACAGACCAGCGTaGGCTGGAGGAAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RALVGRGDLGEHSQSSRAGDRPA*AGGKEG
Trigger: TCCTTCCTTTCCTCCAGCCCACGCTGGTCTGTCCCC...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCGCGAACTCCTGCAGGTaGCACAGCTGGGCTAAGGAC +
Preference number: 4 (lower is better)
Translates to: CAQSSGWQRRFGGTFSVFANSCR*HSWAKD
Trigger: GTCCTTAGCCCAGCTGTGCCACCTGCAGGAGTTCGC...GAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp AGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGGTGGGTAGCTGGTTaGACAAGGTATCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RGDLGEHSQSSRAGLRRARWVAG*TRYPAR
Trigger: CCTGGCAGGATACCTTGTCCAACCAGCTACCCACCT...CGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGCTGGGAGTGCAGAGATaGCCTCCCGACTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: FLSLGSSYCWHKSEFLAGLGVQR*PPDSLS
Trigger: GGACAAGGAGTCGGGAGGCCATCTCTGCACTCCCAG...CCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455895.7
3UTR CAA 72 bp ACAATTCCGGGGGCCCATCTGGTTCATTACAGTAGGTaGCTGGGTCCGACTGCAGGCTATAGAGGCGAGCCT +
Preference number: 4 (lower is better)
Translates to: TIPGAHLVHYSR*LGPTAGYRGEP
Trigger: AGGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR TCA 90 bp AGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGCAGAGGACTTCTCTTTaGCTGCTTGGTAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: REPPESVPRALVGRGDLGQRTSL*LLGSSA
Trigger: AGCAGAGCTACCAAGCAGTCAAAGAGAAGTCCTCTG...CCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR TCA 90 bp CAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCCTTCTCTGTTGCTCCTaGGGAGCCTTCCGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: QRRFGGTFSVFQGWAETSLLCCS*GAFRLY
Trigger: ATACAGACGGAAGGCTCCTCAGGAGCAACAGAGAAG...GCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341071.11
ENST00000446293.6
CDS-3UTR TCA 90 bp CTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGCCGATGCCAGAATTCTaGATGGGAAACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LVGRGDLGEHSQSSRAGLPMPEF*MGNSCW
Trigger: CCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGG...CAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp AGCTGGGCTAAGGACTTGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGCATGCCGATGCCAGAATTCTaGATGGGAAACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SWAKDLGASDMKKPWEGMPMPEF*MGNSCW
Trigger: CCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGG...CATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp GTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCTGGGTGAAATGCCCATaGGCTCCTCTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VPRALVGRGDLGEHSQSSWVKCP*APLPPP
Trigger: AGGAGGAGGAAGAGGAGCTCATGGGCATTTCACCCA...GGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp AGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGTCTCCCAGTCCTCACTaGTGTCCGTGCTTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: SSGWQRRFGGTFSVFQGWSPSPH*CPCLSL
Trigger: AAGGCTCAAGCACGGACATCAGTGAGGACTGGGAGA...CCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp CTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTAGAACTCAGGAGGCCTaGGCAGATACTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LCPELWLAEEIWGNILSLRTQEA*ADTWPW
Trigger: CCAGGGCCAAGTATCTGCTCAGGCCTCCTGAGTTCT...AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp GTAGGTGGCATGGCCCTCCCTGCCTGCTTATGTATGGACAGAGTATGTTGTCTCCCTGAGGGGTGGGCCTaGTGCTCTGATTACCTCAGA +
Preference number: 4 (lower is better)
Translates to: VGGMALPACLCMDRVCCLPEGWA*CSDYLR
Trigger: TCTGAGGTAATCAGAGCATCAGGCCCACCCCTCAGG...GAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCCATGCCACCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp ATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTGGGTGCATCCGACATaGAGAAGCCCTGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ICAQSSGWQRRFGGTFSVWVHPT*RSPGKA
Trigger: TGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCA...GACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp GAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACACAGAAACACACAGAAGGGCCTaGAGTAGCCCCCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ELRWVAGWTRYPARQHTETHRRA*SSPLPS
Trigger: AGAAGGGAGGGGGCTACTTCAGGCCCTTCTGTGTGT...TTCTGTGTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp ACAGGGGAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACGTAAGTACTCGGCTTTaGTCACCGCTCTGTACCGCT +
Preference number: 4 (lower is better)
Translates to: TGELRWVAGWTRYPARQHVSTRL*SPLCTA
Trigger: AGCGGTACAGAGCGGTGATCAAAGCCGAGTACTTAC...GTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTCCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp GAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACACAGAAACCAGAGCAGCATCGTaGAGCACCAGGCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ELRWVAGWTRYPARQHTETRAAS*STRLSR
Trigger: TCTGGAGAGCCTGGTGCTTCACGATGCTGCTCTGGT...TTCTGTGTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp GTAGGTGGCATGGCCCTCCCTGCCTGCTTATGTATGGACAGAGTATGTTGTCTCCTCTCTCGGTGTCCCTaGCCCACGATCCCTTTCACT +
Preference number: 4 (lower is better)
Translates to: VGGMALPACLCMDRVCCLLSRCP*PTIPFT
Trigger: AGTGAAAGGGATCGTGGGTCAGGGACACCGAGAGAG...GAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCCATGCCACCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp TTCCAGCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTGCACCTCCTCTTCGGTTTGAAGTGGAAGTaGCCTCACTCTCTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: FQLPGGIHFGKCHLHLLFGLKWK*PHSLGV
Trigger: GACACCGAGAGAGTGAGGTCACTTCCACTTCAAACC...GAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444377.5
CDS-3UTR TCA 90 bp CCAGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTCAGCCAGCTTCTCCTTaGCCACGCTGGCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGSPSGNVEILATGTFASQPASP*PRWPWL
Trigger: CAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTG...AGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR TCA 90 bp CCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGTCTCCCAGTCCTCACTaGTGTCCGTGCTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PQEQWVFSRKTQALLVRRSPSPH*CPCLSL
Trigger: GAGGCTCAAGCACGGACATCAGTGAGGACTGGGAGA...CCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444377.5
CDS-3UTR TCA 90 bp CAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGTCCCAAAGGCAAAGCTaGATCTGGGATGAGGACAAG +
Preference number: 4 (lower is better)
Translates to: QGATRICAQSSGWQRRFGSQRQS*IWDEDK
Trigger: CTTGTCCTCATCCCAGATTCAGCTTTGCCTTTGGGA...CCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR TCA 90 bp CACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTGCCTGTTGCGAGCCCTaGCCCTTTCTCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: HQNLCPELWLAEEIWGNIACCEP*PFLIPK
Trigger: CTTTGGGATGAGAAAGGGTCAGGGCTCGCAACAGGC...AATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR GCA 90 bp AGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGGACTTCTCTTTGACTaGTTGGTAGCTCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: REPPESVPRALVGRGDLGGLLFD*LVALLQ
Trigger: CTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAGTCC...CCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp GAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACACAGAACAGGCCGTGTCATGCTaGACCACCTGGGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: ELRWVAGWTRYPARQHTEQAVSC*TTWVNS
Trigger: GGAGTTTACCCAGGTGGTGCAGCATGACACGGCCTG...TTCTGTGTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp ACCGATGCCAGAATTCTGAATGGGAAACAGCTGCTGGAACCATCTTGGTGTAGACACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: TDARILNGKQLLEPSWCRHAGRG*DGTGRV
Trigger: GACACGGCCTGTACCATCGCAGCCACGGCCAGCGTG...TCTACACCAAGATGGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR GCA 90 bp CCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATAGAGGCGAGCCTTGGTaGCATCATAGGGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PLPWVILLLAQVRVSGRDRGEPW*HHRAQL
Trigger: CAGCTGAGCCCTATGATGGCACCAAGGCTCGCCTCT...ATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp TGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCAGAGGCGAGCCTTGGTaGCATCATAGGGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: CAQSSGWQRRFGGTFSVFRGEPW*HHRAQL
Trigger: CAGCTGAGCCCTATGATGGCACCAAGGCTCGCCTCT...GAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp GGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGGTTCATTACAGTAGGTTaGTGGGTCCGACTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GDLGEHSQSSRAGLRRARFITVG*WVRLQA
Trigger: AGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAA...CCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCCCGGATGGAGGGGCTaGCTACAAGGAGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: ALLVRRIGFLSLGSSYCWPGWRG*LQGALR
Trigger: TCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGG...CCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp TGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGGTGTCACGAGGGAGATaGTCTCACTGCTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: WQRRFGGTFSVFQGWAETVSRGR*SHCSLM
Trigger: CATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACAC...CGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp TGGACAGAGTATGTTGTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCCACTCGTGCCTCAGGTaGAGTGGCCGGGTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: WTEYVVSASSERDWWFSFHSCLR*SGRVGD
Trigger: ATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTG...GAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGACAACATACTCTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp TATGTTGTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACGAGGGAGGCGAGAGATaGCATGGGTGGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: YVVSASSERDWWFSFCLHEGGER*HGWGSC
Trigger: GCAGCTCCCCCACCCATGGCATCTCTCGCCTCCCTC...GTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGACAACATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp CCTTCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTATGGCCCTCCCTGCCTaGTTATGTATGGACAGAGTA +
Preference number: 4 (lower is better)
Translates to: PSWGGEETQERTPAGGTAMALPA*LCMDRV
Trigger: TACTCTGTCCATACATAAGCAGGCAGGGAGGGCCAT...AGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp GGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCAAGAGCGAACTCCTaGAGGTGGCACAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GSSGEEDRFPLPWVILLLARANS*RWHSWA
Trigger: AGCCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGC...CAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp GGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCGCAAGAGCGAACTCCTaGAGGTGGCACAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GEEDRFPLPWVILLLAQVARANS*RWHSWA
Trigger: AGCCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGC...GACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp GGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGATCATTCCCCCAGAGGTaGAGCTTTACCAGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: GRGDLGEHSQSSRAGLRRSFPQR*SFTRVE
Trigger: CTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGA...TCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp AAATGTGTTCACTGTCCCTGTTTAGCCAAGGGTAGGTGGCATGGCCCTCCCTGCTCATGCTGCACCACCTaGGTAAACTCCGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KCVHCPCLAKGRWHGPPCSCCTT*VNSVRS
Trigger: GGACCTGACGGAGTTTACCCAGGTGGTGCAGCATGA...GCAGGGAGGGCCATGCCACCTACCCTTGGCTAAACAGGGACAGTGAACACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGTCATGCTGCACCACCTaGGTAAACTCCGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ELWLAEEIWGNILSLPGLSCCTT*VNSVRS
Trigger: GGACCTGACGGAGTTTACCCAGGTGGTGCAGCATGA...CAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR CCA 90 bp TTCTCTTCACAGGGGCTCTGGGGGCCAGGTTCTCCTTCAGGGAATGTAGAAATTTGGCCGTGGCTGCGATaGTACAGGCCGTGTCATGCT +
Preference number: 4 (lower is better)
Translates to: FSSQGLWGPGSPSGNVEIWPWLR*YRPCHA
Trigger: AGCATGACACGGCCTGTACCATCGCAGCCACGGCCA...AATTTCTACATTCCCTGAAGGAGAACCTGGCCCCCAGAGCCCCTGTGAAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CCA 90 bp CAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCTGGCCGTGGCTGCGATaGTACAGGCCGTGTCATGCT +
Preference number: 4 (lower is better)
Translates to: QKNTGSSGEEDRFPLPWVWPWLR*YRPCHA
Trigger: AGCATGACACGGCCTGTACCATCGCAGCCACGGCCA...GACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp CTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACTGGCCGTGGCTGCGATaGTACAGGCCGTGTCATGCT +
Preference number: 4 (lower is better)
Translates to: LLVRRIGFLSLGSSYCWHWPWLR*YRPCHA
Trigger: AGCATGACACGGCCTGTACCATCGCAGCCACGGCCA...GTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp AGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGGTCGATGGTTTTGTCTaGCGAAGGGGCAAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: RGDLGEHSQSSRAGLRRAVDGFV*RRGKGV
Trigger: GACACCTTTGCCCCTTCGCCAGACAAAACCATCGAC...CGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR CCA 90 bp TGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGTATAGAGGCGAGCCTTaGTGCCATCATAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: WQRRFGGTFSVFQGWAETYRGEP*CHHRAQ
Trigger: CTGAGCCCTATGATGGCACCAAGGCTCGCCTCTATA...CGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR CCA 90 bp TGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGTTCCGGGGGCCCATCTaGTTCATTACAGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: WQRRFGGTFSVFQGWAETFRGPI*FITVGC
Trigger: GCAACCTACTGTAATGAACCAGATGGGCCCCCGGAA...CGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp AGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGTTCCGGGGGCCCATCTaGTTCATTACAGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: RRFGGTFSVFQGWAETSEFRGPI*FITVGC
Trigger: GCAACCTACTGTAATGAACCAGATGGGCCCCCGGAA...CTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTCTGCTGGAACCATCTTaGTGTAGAGGGCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: RALVGRGDLGEHSQSSRALLEPS*CRGPGW
Trigger: CCATCCGGGCCCTCTACACCAAGATGGTTCCAGCAG...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCTGCTGGAACCATCTTaGTGTAGAGGGCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: LCPELWLAEEIWGNILSLLLEPS*CRGPGW
Trigger: CCATCCGGGCCCTCTACACCAAGATGGTTCCAGCAG...AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGATGGGAAACAGCTGCTaGAACCATCTTGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: GSHQNLCPELWLAEEIWGMGNSC*NHLGVE
Trigger: CTCTACACCAAGATGGTTCCAGCAGCTGTTTCCCAT...CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGTGCCAGAATTCTGAATaGGAAACAGCTGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: SWGGEETQERTPAGGTAGCQNSE*ETAAGT
Trigger: GGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCA...CCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGTGCCAGAATTCTGAATaGGAAACAGCTGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: GSHQNLCPELWLAEEIWGCQNSE*ETAAGT
Trigger: GGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCA...CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp ATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTCTTCACAGGGGCTCTaGGGGCCAGGTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ICAQSSGWQRRFGGTFSVSSQGL*GPGSPS
Trigger: TGAAGGAGAACCTGGCCCCCAGAGCCCCTGTGAAGA...GACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCGTGCAGTGGCCGGGTTaGCGATCTGTGTCACGAGGG +
Preference number: 4 (lower is better)
Translates to: VFSRKTQALLVRRIGFLSVQWPG*RSVSRG
Trigger: CCCTCGTGACACAGATCGCCAACCCGGCCACTGCAC...GGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTACACCCGTAAGTCTGTaGGCGCCTCCTCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LSLGSSYCWHKSEFLAGITPVSL*APPPSE
Trigger: CTCTGAGGGAGGAGGCGCCCACAGACTTACGGGTGT...AATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCCGGAGGCATCCACTTTaGAAAGTGCCATCTGCACCT +
Preference number: 4 (lower is better)
Translates to: QRRFGGTFSVFQGWAETSRRHPL*KVPSAP
Trigger: AGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCG...GCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp AGGCCAAGTATATACTCAGGCCTCATACCTGAGGACCACAACTCAGAAGGTCAGGCCAGCAAGCCCCTGTaGCCTGACAGGGCACTATGG +
Preference number: 4 (lower is better)
Translates to: RPSIYSGLIPEDHNSEGQASKPL*PDRALW
Trigger: CCATAGTGCCCTGTCAGGCCACAGGGGCTTGCTGGC...CTGACCTTCTGAGTTGTGGTCCTCAGGTATGAGGCCTGAGTATATACTTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CCA 90 bp GGTGTCCCTGACCCACGATCCCTTTCACTCATTGGTGAGCACACCAGATTAGGTGGCCAAAAGCAGAGGTaGCAGTGGCCTACAGATGCC +
Preference number: 4 (lower is better)
Translates to: GVPDPRSLSLIGEHTRLGGQKQR*QWPTDA
Trigger: GGCATCTGTAGGCCACTGCCACCTCTGCTTTTGGCC...ACCTAATCTGGTGTGCTCACCAATGAGTGAAAGGGATCGTGGGTCAGGGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CCA 90 bp GTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCAGGCGAGAGATGCCATaGGTGGGGGAGCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VFSRKTQALLVRRIGFLSRREMP*VGELLP
Trigger: AGGGAGCAGCTCCCCCACCCATGGCATCTCTCGCCT...GGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACAGCTAGAACTATCCCTTaGGACTTCCCAGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: ATRICAQSSGWQRRFGGTARTIP*DFPAGV
Trigger: GACTCCTGCTGGGAAGTCCCAAGGGATAGTTCTAGC...TGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGAGGAAAGGAAGGAGGTaGGTCAGGGTTTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ALVGRGDLGEHSQSSRAGRKGRR*VRVWSL
Trigger: CAGAGACCAAACCCTGACCCACCTCCTTCCTTTCCT...CCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACAAGGAAAGGAAGGAGGTaGGTCAGGGTTTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ATRICAQSSGWQRRFGGTRKGRR*VRVWSL
Trigger: CAGAGACCAAACCCTGACCCACCTCCTTCCTTTCCT...TGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TTCCAGCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTGCACCTCCTCTTCGTTGAGGTGGGTAGCTaGTTGGACAAGGTATCCTGC +
Preference number: 4 (lower is better)
Translates to: FQLPGGIHFGKCHLHLLFVEVGS*LDKVSC
Trigger: GCAGGATACCTTGTCCAACCAGCTACCCACCTCAAC...GAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444377.5
CDS-3UTR CCA 90 bp AGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGCCCCTACCCTGTCTCTaGCTCCAAGTGGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SRKTQALLVRRIGFLSLGPLPCL*LQVGSQ
Trigger: CTGGCTTCCCACTTGGAGCCAGAGACAGGGTAGGGG...CCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455895.7
3UTR CAA 72 bp CCCAGCTCAAGTCTCCCCACGGAACGTTTTCTTGCTTaGTTCCTACTCTTGGCCTGCTGTCGGCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PSSSLPTERFLA*FLLLACCRLSP
Trigger: AGGGCTTAGCCGACAGCAGGCCAAGAGTAGGAACAAAGCAAGAAAACGTTCCGTGGGGAGACTTGAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341071.11
3UTR CAA 72 bp GCAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTaGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: AGSHQNLCPELW*AEEIWGNILSL
Trigger: AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp AGCTGGGCTAAGGACTTGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGCATGCAGAGGACTTCTCTTTaGCTGCTTGGTAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SWAKDLGASDMKKPWEGMQRTSL*LLGSSA
Trigger: AGCAGAGCTACCAAGCAGTCAAAGAGAAGTCCTCTG...CATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp AAGTCACCAGATTCTCTTCACAGGGGCTCTGGGGGCCAGGTTCTCCTTCAGGGACAGAGGACTTCTCTTTaGCTGCTTGGTAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KSPDSLHRGSGGQVLLQGQRTSL*LLGSSA
Trigger: AGCAGAGCTACCAAGCAGTCAAAGAGAAGTCCTCTG...TCCCTGAAGGAGAACCTGGCCCCCAGAGCCCCTGTGAAGAGAATCTGGTGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR TCA 90 bp GAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGCCGATGCCAGAATTCTaGATGGGAAACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ELWLAEEIWGNILSLPGLPMPEF*MGNSCW
Trigger: CCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGG...CAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp TGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCTGGGTGAAATGCCCATaGGCTCCTCTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CAQSSGWQRRFGGTFSVFWVKCP*APLPPP
Trigger: AGGAGGAGGAAGAGGAGCTCATGGGCATTTCACCCA...GAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp CACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTTGGGTGAAATGCCCATaGGCTCCTCTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HQNLCPELWLAEEIWGNIWVKCP*APLPPP
Trigger: AGGAGGAGGAAGAGGAGCTCATGGGCATTTCACCCA...AATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp GAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGTGCTGGGGGCTCAACTaGAGTCACCAGATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ELWLAEEIWGNILSLPGLCWGLN*SHQILF
Trigger: GAAGAGAATCTGGTGACTTCAGTTGAGCCCCCAGCA...CAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp GTAGGTGGCATGGCCCTCCCTGCCTGCTTATGTATGGACAGAGTATGTTGTCTCTCTCCCAGTCCTCACTaGTGTCCGTGCTTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: VGGMALPACLCMDRVCCLSPSPH*CPCLSL
Trigger: AAGGCTCAAGCACGGACATCAGTGAGGACTGGGAGA...GAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCCATGCCACCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341071.11
ENST00000455895.7
CDS-3UTR TCA 90 bp CTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTTGGCCAGGCTGGTCTTaGACTCCTCGCCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LSLGSSYCWHKSEFLAGIWPGWS*TPRLKQ
Trigger: TTGCTTGAGGCGAGGAGTTCAAGACCAGCCTGGCCA...AATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp GCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCACAAATAATGCCATGGCTCTaGGAAGCAGAGAACTCAGGA +
Preference number: 4 (lower is better)
Translates to: APHSPRGAALPEWRVRAQIMPWL*EAENSG
Trigger: TCCTGAGTTCTCTGCTTCTCAGAGCCATGGCATTAT...TTGTGCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp TCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGACTAACCTCCACTTGCTaGGCAGAGCCACCTCCCATC +
Preference number: 4 (lower is better)
Translates to: SQLPPRETGGLASVYTGRLTSTC*AEPPPI
Trigger: GATGGGAGGTGGCTCTGCTCAGCAAGTGGAGGTTAG...TCTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp AGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGACACATAGTTACTCCTaGGTCAGGCCCAGACCTAAC +
Preference number: 4 (lower is better)
Translates to: RRFGGTFSVFQGWAETSETHSYS*VRPRPN
Trigger: GTTAGGTCTGGGCCTGACTCAGGAGTAACTATGTGT...CTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp GAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGTAAGTACTCGGCTTTaGTCACCGCTCTGTACCGCT +
Preference number: 4 (lower is better)
Translates to: ELWLAEEIWGNILSLPGLVSTRL*SPLCTA
Trigger: AGCGGTACAGAGCGGTGATCAAAGCCGAGTACTTAC...CAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp AGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGCCTTTCACTCATTGGTaGGCACACCAGATTAGGTAC +
Preference number: 4 (lower is better)
Translates to: REPPESVPRALVGRGDLGPFTHW*AHQIRY
Trigger: GTACCTAATCTGGTGTGCTCACCAATGAGTGAAAGG...CCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp AGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGCTCTCTCGGTGTCCCTaGCCCACGATCCCTTTCACT +
Preference number: 4 (lower is better)
Translates to: SRKTQALLVRRIGFLSLGLSRCP*PTIPFT
Trigger: AGTGAAAGGGATCGTGGGTCAGGGACACCGAGAGAG...CCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp GCTAAGGACTTGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGCATGGGGACACCCTCACTGAAGGTTTaGAGTGGAAGTGACCTCACT +
Preference number: 4 (lower is better)
Translates to: AKDLGASDMKKPWEGMGTPSLKV*SGSDLT
Trigger: AGTGAGGTCACTTCCACTTCAAACCTTCAGTGAGGG...TGTCCCCATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp CAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCAAGCTGAATCTGGGATaGGGACAAGGTACGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QRRFGGTFSVFQGWAETSKLNLG*GQGTSS
Trigger: AGAGGACGTACCTTGTCCTCATCCCAGATTCAGCTT...GCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR GCA 90 bp ACAGGGGAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACGGACTTCTCTTTGACTaGTTGGTAGCTCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TGELRWVAGWTRYPARQHGLLFD*LVALLQ
Trigger: CTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAGTCC...GTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTCCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp ACCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTGCACCTCCTCTTCAGTCGGACTTCTCTTTGACTaGTTGGTAGCTCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TSPEASTLESAICTSSSVGLLFD*LVALLQ
Trigger: CTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAGTCC...GACTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR GCA 90 bp GCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACAGGACTTCTCTTTGACTaGTTGGTAGCTCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ATRICAQSSGWQRRFGGTGLLFD*LVALLQ
Trigger: CTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAGTCC...TGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp AGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGGGACTTCTCTTTGACTaGTTGGTAGCTCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RRFGGTFSVFQGWAETSEGLLFD*LVALLQ
Trigger: CTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAGTCC...CTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR GCA 90 bp GCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCAGGCCGTGTCATGCTaGACCACCTGGGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: ALLVRRIGFLSLGSSYCWQAVSC*TTWVNS
Trigger: GGAGTTTACCCAGGTGGTGCAGCATGACACGGCCTG...CCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp CTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACCATAGGGCTCAGCTGTaGCAGACGGTGTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: LLVRRIGFLSLGSSYCWHHRAQL*QTVCPS
Trigger: TGATGGGCACACCGTCTGGCACAGCTGAGCCCTATG...GTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp AGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGTTCATTACAGTAGGTTaGTGGGTCCGACTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RGDLGEHSQSSRAGLRRAFITVG*WVRLQA
Trigger: AGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAA...CGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp CCCTGTTCCTCCAAGGATGCCTCTAGCAGCTTTTGGGACAGGTCCTTGGGTAGCTTCATTACAGTAGGTTaGTGGGTCCGACTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PCSSKDASSSFWDRSLGSFITVG*WVRLQA
Trigger: AGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAA...GCTACCCAAGGACCTGTCCCAAAAGCTGCTAGAGGCATCCTTGGAGGAACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR GCA 90 bp GCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGTTCATTACAGTAGGTTaGTGGGTCCGACTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ALVGRGDLGEHSQSSRAGFITVG*WVRLQA
Trigger: AGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAA...CCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp TGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGTTCATTACAGTAGGTTaGTGGGTCCGACTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: WQRRFGGTFSVFQGWAETFITVG*WVRLQA
Trigger: AGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAA...CGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCCCGGATGGAGGGGCTaGCTACAAGGAGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: VFSRKTQALLVRRIGFLSPGWRG*LQGALR
Trigger: TCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCGGG...GGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp ACCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTGCACCTCCTCTTCAGTCGGCCACAGGAACCTTTaGCTCTTTTGGAGATATGGG +
Preference number: 4 (lower is better)
Translates to: TSPEASTLESAICTSSSVGHRNL*LFWRYG
Trigger: CCCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCC...GACTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR GCA 90 bp CTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGGGCCACAGGAACCTTTaGCTCTTTTGGAGATATGGG +
Preference number: 4 (lower is better)
Translates to: LVGRGDLGEHSQSSRAGLGHRNL*LFWRYG
Trigger: CCCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCC...CAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACAGGCCACAGGAACCTTTaGCTCTTTTGGAGATATGGG +
Preference number: 4 (lower is better)
Translates to: ATRICAQSSGWQRRFGGTGHRNL*LFWRYG
Trigger: CCCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCC...TGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCGGGAGATGCTCTCACTaGTCTCTGATGGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: VPRALVGRGDLGEHSQSSGRCSH*SLMESP
Trigger: AGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCC...GGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGCTAAGGACTATCCACTTTGGAAAGTaGCATCTGCACCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GEETQERTPAGGTAGLRTIHFGK*HLHLLF
Trigger: GAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGAT...AGTCCTTAGCCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp TGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCAGCCACCAGAATCTGTaGCCAGAGCTCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: CAQSSGWQRRFGGTFSVFSHQNL*PELWLA
Trigger: TGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCT...GAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp CACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTAGCCACCAGAATCTGTaGCCAGAGCTCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: HQNLCPELWLAEEIWGNISHQNL*PELWLA
Trigger: TGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCT...AATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp CCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGTGGCATGGCCCTCCCTaGCTGCTTATGTATGGACAG +
Preference number: 4 (lower is better)
Translates to: PQEQWVFSRKTQALLVRRWHGPP*LLMYGQ
Trigger: CTGTCCATACATAAGCAGGCAGGGAGGGCCATGCCA...CCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp GGTGTCCCTGACCCACGATCCCTTTCACTCATTGGTGAGCACACCAGATTAGGTTCCAGGAATGGAAAATaGCTGGGAGGGGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: GVPDPRSLSLIGEHTRLGSRNGK*LGGGES
Trigger: GGACTCTCCCCCTCCCAGGCATTTTCCATTCCTGGA...ACCTAATCTGGTGTGCTCACCAATGAGTGAAAGGGATCGTGGGTCAGGGACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp AGGCCAAGTATATACTCAGGCCTCATACCTGAGGACCACAACTCAGAAGGTCAGGCAAGAGCGAACTCCTaGAGGTGGCACAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RPSIYSGLIPEDHNSEGQARANS*RWHSWA
Trigger: AGCCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGC...CTGACCTTCTGAGTTGTGGTCCTCAGGTATGAGGCCTGAGTATATACTTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR GCA 90 bp AGCTGGGCTAAGGACTTGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGCATGTTGGACAAGGTATCCTaGCAGGCAACACACAGAAGG +
Preference number: 4 (lower is better)
Translates to: SWAKDLGASDMKKPWEGMLDKVS*QATHRR
Trigger: CCTTCTGTGTGTTGCCTGGCAGGATACCTTGTCCAA...CATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp CTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACCTCTCCAGAGATTCCTaGAGCCCCTCATTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLVRRIGFLSLGSSYCWHLSRDS*SPSFPQ
Trigger: CTGGGGGAATGAGGGGCTGCAGGAATCTCTGGAGAG...GTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp GGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGTTCCGCCATCTTGCCTaGATGACATCACCACTATTT +
Preference number: 4 (lower is better)
Translates to: GSHQNLCPELWLAEEIWGFRHLA*MTSPLF
Trigger: AAATAGTGGTGATGTCATGCAGGCAAGATGGCGGAA...CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419121.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp CCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGCCCCTTCCGCCATCTTaGCTGCATGACATCACCACT +
Preference number: 4 (lower is better)
Translates to: PQEQWVFSRKTQALLVRRPLPPS*LHDITT
Trigger: AGTGGTGATGTCATGCAGGCAAGATGGCGGAAGGGG...CCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419121.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGTCATGCTGCACCACCTaGGTAAACTCCGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: FLSLGSSYCWHKSEFLAGSCCTT*VNSVRS
Trigger: GGACCTGACGGAGTTTACCCAGGTGGTGCAGCATGA...CCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp CAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGATTACAGTAGGTTGCTaGGTCCGACTGCAGGCTATA +
Preference number: 4 (lower is better)
Translates to: QGATRICAQSSGWQRRFGITVGC*VRLQAI
Trigger: TATAGCCTGCAGTCGGACCCAGCAACCTACTGTAAT...CCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAATTACAGTAGGTTGCTaGGTCCGACTGCAGGCTATA +
Preference number: 4 (lower is better)
Translates to: GATRICAQSSGWQRRFGGITVGC*VRLQAI
Trigger: TATAGCCTGCAGTCGGACCCAGCAACCTACTGTAAT...TCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGGATTACAGTAGGTTGCTaGGTCCGACTGCAGGCTATA +
Preference number: 4 (lower is better)
Translates to: GDLGEHSQSSRAGLRRARITVGC*VRLQAI
Trigger: TATAGCCTGCAGTCGGACCCAGCAACCTACTGTAAT...CCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCCTGCTGGAACCATCTTaGTGTAGAGGGCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: QKNTGSSGEEDRFPLPWVLLEPS*CRGPGW
Trigger: CCATCCGGGCCCTCTACACCAAGATGGTTCCAGCAG...GACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCACAAATGGGAAACAGCTGCTaGAACCATCTTGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: APHSPRGAALPEWRVRAQMGNSC*NHLGVE
Trigger: CTCTACACCAAGATGGTTCCAGCAGCTGTTTCCCAT...TTGTGCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTGTGCCTCAGGTGCAGTaGCCGGGTTGGCGATCTGTG +
Preference number: 4 (lower is better)
Translates to: EDRFPLPWVILLLAQVRVVPQVQ*PGWRSV
Trigger: CACAGATCGCCAACCCGGCCACTGCACCTGAGGCAC...AACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTTTTGGGACAGGTCCTTaGGTAGCACTCGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RALVGRGDLGEHSQSSRAFGTGP*VALVPQ
Trigger: CTGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAA...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGGCCTCTAGCAGCTTTTaGGACAGGTCCTTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: PQEQWVFSRKTQALLVRRASSSF*DRSLGS
Trigger: GCTACCCAAGGACCTGTCCCAAAAGCTGCTAGAGGC...CCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATGCCTCTAGCAGCTTTTaGGACAGGTCCTTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: PLPWVILLLAQVRVSGRDASSSF*DRSLGS
Trigger: GCTACCCAAGGACCTGTCCCAAAAGCTGCTAGAGGC...ATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp ACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCGCCTCTAGCAGCTTTTaGGACAGGTCCTTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: TRICAQSSGWQRRFGGTFASSSF*DRSLGS
Trigger: GCTACCCAAGGACCTGTCCCAAAAGCTGCTAGAGGC...GAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGGCCTCTAGCAGCTTTTaGGACAGGTCCTTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: VSASSERDWWFSFCLHRQASSSF*DRSLGS
Trigger: GCTACCCAAGGACCTGTCCCAAAAGCTGCTAGAGGC...CTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTTGGAGATATGTCTGGGCCGCCGGTGTaGCCAGCAGGCGTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: SGNVEILATGTFASFGDMSGPPV*PAGVRG
Trigger: GCCCCTAACGCCTGCTGGCCACACCGGCGGCCCAGA...CATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp TGGCGATCTGTGTCACGAGGGAGATGCTCTCACTGCTCTCTGATGGAGTCACCTCGGAGGCATCCACTTTaGAAAGTGCCATCTGCACCT +
Preference number: 4 (lower is better)
Translates to: WRSVSRGRCSHCSLMESPRRHPL*KVPSAP
Trigger: AGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCG...AGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp CAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGTCTTCCAGCTGCAAATaGGAGGGGGTAATGGAAATC +
Preference number: 4 (lower is better)
Translates to: QGATRICAQSSGWQRRFGSSSCK*EGVMEI
Trigger: GATTTCCATTACCCCCTCCCATTTGCAGCTGGAAGA...CCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CCA 90 bp CTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTGCCCAGAGCTCTGGTTaGCAGAGGAGATTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LSLGSSYCWHKSEFLAGIAQSSG*QRRFGG
Trigger: TCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGC...AATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp ACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCCTGTGCCCAGAGCTCTaGTTGGCAGAGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: TRICAQSSGWQRRFGGTFLCPEL*LAEEIW
Trigger: CCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG...GAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAACAAGTCAGAGTTTCTaGCCGGGATTTAGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: GRGDLGEHSQSSRAGLRRTSQSF*PGFREP
Trigger: GGGCTCTCTAAATCCCGGCCAGAAACTCTGACTTGT...TCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp AGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGTGCCTCTTACCCACTaGGATAGGAACCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: REPPESVPRALVGRGDLGVPLTH*DRNQNV
Trigger: CACATTTTGGTTCCTATCCCAGTGGGTAAGAGGCAC...CCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGAATGGAAAATGCCTaGGAGGGGGAGAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: RALVGRGDLGEHSQSSRAGMENA*EGESPK
Trigger: CTTGGGACTCTCCCCCTCCCAGGCATTTTCCATTCC...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TTCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGTCAGGGTTTGGTCTCTaGATTCTGAACCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: FLGRGRNARANSCRWHSWSGFGL*ILNPKG
Trigger: TCCTTTGGGGTTCAGAATCCAGAGACCAAACCCTGA...CCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCGGGGACAGACCAGCGTaGGCTGGAGGAAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VFSRKTQALLVRRIGFLSGDRPA*AGGKEG
Trigger: TCCTTCCTTTCCTCCAGCCCACGCTGGTCTGTCCCC...GGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGATGCAGGTGGCACAGCTaGGCTAAGGACTTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SQLPPRETGGLASVYTGRCRWHS*AKDLGA
Trigger: TGCACCCAAGTCCTTAGCCCAGCTGTGCCACCTGCA...TCTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGAGGTGGGTAGCTGGTTaGACAAGGTATCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VSASSERDWWFSFCLHRQRWVAG*TRYPAR
Trigger: CCTGGCAGGATACCTTGTCCAACCAGCTACCCACCT...CTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp CCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGAGGTGGGTAGCTGGTTaGACAAGGTATCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PQEQWVFSRKTQALLVRRRWVAG*TRYPAR
Trigger: CCTGGCAGGATACCTTGTCCAACCAGCTACCCACCT...CCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR CAA 72 bp GTCCTAAACTACAGGGGAGTTGAGGTGGGTAGCTGGTaGGACAAGGTATCCTGCCAGGCAACACACAGAAGG +
Preference number: 4 (lower is better)
Translates to: VLNYRGVEVGSW*DKVSCQATHRR
Trigger: CCTTCTGTGTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTCCCCTGTAGTTTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp CACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCCGATGCCAGAATTCTaGATGGGAAACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HQNLCPELWLAEEIWGNIPMPEF*MGNSCW
Trigger: CCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGG...AATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp CTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTTGCTGGGGGCTCAACTaGAGTCACCAGATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LCPELWLAEEIWGNILSLCWGLN*SHQILF
Trigger: GAAGAGAATCTGGTGACTTCAGTTGAGCCCCCAGCA...AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp TCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGACTCAGGCCTCATACCTaGGGACCACAACTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SQLPPRETGGLASVYTGRLRPHT*GPQLRR
Trigger: CCTTCTGAGTTGTGGTCCTCAGGTATGAGGCCTGAG...TCTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp ACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCGAACTTGCCTCCTGCTaGGCAGATAATGCCATGGCT +
Preference number: 4 (lower is better)
Translates to: TRICAQSSGWQRRFGGTFELASC*ADNAMA
Trigger: AGCCATGGCATTATCTGCTCAGCAGGAGGCAAGTTC...GAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGTTTGAAGTGGAAGTaGCCTCACTCTCTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: RALVGRGDLGEHSQSSRAGLKWK*PHSLGV
Trigger: GACACCGAGAGAGTGAGGTCACTTCCACTTCAAACC...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp AAATGTGTTCACTGTCCCTGTTTAGCCAAGGGTAGGTGGCATGGCCCTCCCTGCCCCTCACTGAAGGTTTaGAGTGGAAGTGACCTCACT +
Preference number: 4 (lower is better)
Translates to: KCVHCPCLAKGRWHGPPCPSLKV*SGSDLT
Trigger: AGTGAGGTCACTTCCACTTCAAACCTTCAGTGAGGG...GCAGGGAGGGCCATGCCACCTACCCTTGGCTAAACAGGGACAGTGAACACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp ACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCATCCCACCCCCTCACTaGAGGTTTGAAGTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: TRICAQSSGWQRRFGGTFIPPPH*RFEVEV
Trigger: CACTTCCACTTCAAACCTTCAGTGAGGGGGTGGGAT...GAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp GGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGGCGAGCCTTCTCTTTaGCTGCTTGGTAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GSSGEEDRFPLPWVILLLGEPSL*LLGSSA
Trigger: AGCAGAGCTACCAAGCAGTCAAAGAGAAGGCTCGCC...CAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526031.5
CDS-3UTR GCA 90 bp GGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGTACAGGCCGTGTCATaGTGCACCACCTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: GSSGEEDRFPLPWVILLLVQAVS*CTTWVN
Trigger: GTTTACCCAGGTGGTGCAGCATGACACGGCCTGTAC...CAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp AGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: RFSFRECRNFGHRNLCLFHAGRG*DGTGRV
Trigger: GACACGGCCTGTACCATCGCAGCCACGGCCAGCGTG...AAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR GCA 90 bp TATGTTGTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACCGGGCTCTTCAGAGATaGTCTGTTCCGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: YVVSASSERDWWFSFCLHRALQR*SVPPAA
Trigger: AGCAGCGGGCGGAACAGAGCATCTCTGAAGAGCCCG...GTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGACAACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp CTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTGGGAGATGCTCTCACTaGTCTCTGATGGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: LCPELWLAEEIWGNILSLGRCSH*SLMESP
Trigger: AGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCC...AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp TGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCGGGAGATGCTCTCACTaGTCTCTGATGGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: CAQSSGWQRRFGGTFSVFGRCSH*SLMESP
Trigger: AGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCC...GAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp CCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATGGGAGATGCTCTCACTaGTCTCTGATGGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: PLPWVILLLAQVRVSGRDGRCSH*SLMESP
Trigger: AGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCC...ATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp ACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCGTGTCACGAGGGAGATaGTCTCACTGCTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: TRICAQSSGWQRRFGGTFVSRGR*SHCSLM
Trigger: CATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACAC...GAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGGCACGGAACGTTTTCTTaGTTTGTTCCTACTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GDLGEHSQSSRAGLRRARHGTFS*FVPTLG
Trigger: GCCAAGAGTAGGAACAAAGCAAGAAAACGTTCCGTG...CCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR GCA 90 bp GTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGCCACAAGGTGATGGCTaGCTACAGGAACCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: VSASSERDWWFSFCLHRQPQGDG*LQEPSQ
Trigger: CTGACTTGGTTCCTGTAGGCAGCCATCACCTTGTGG...CTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR GCA 90 bp CTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTAGCCACCAGAATCTGTaGCCAGAGCTCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LSLGSSYCWHKSEFLAGISHQNL*PELWLA
Trigger: TGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCT...AATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp CATGGCCCTCCCTGCCTGCTTATGTATGGACAGAGTATGTTGTCTCAGCTTCCTTCCAGGAATGGAAAATaGCTGGGAGGGGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: HGPPCLLMYGQSMLSQLPSRNGK*LGGGES
Trigger: GGACTCTCCCCCTCCCAGGCATTTTCCATTCCTGGA...AGGAAGCTGAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTTCATTCCCCCAGAGGTaGAGCTTTACCAGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: RALVGRGDLGEHSQSSRASFPQR*SFTRVE
Trigger: CTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGA...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp GTAGGTGGCATGGCCCTCCCTGCCTGCTTATGTATGGACAGAGTATGTTGTCTCTCATTCCCCCAGAGGTaGAGCTTTACCAGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: VGGMALPACLCMDRVCCLSFPQR*SFTRVE
Trigger: CTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGA...GAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCCATGCCACCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp CAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGTTCCGCCATCTTGCCTaGATGACATCACCACTATTT +
Preference number: 4 (lower is better)
Translates to: QGATRICAQSSGWQRRFGFRHLA*MTSPLF
Trigger: AAATAGTGGTGATGTCATGCAGGCAAGATGGCGGAA...CCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419121.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGCCTTCTCTTTGACTaGTTGGTAGCTCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VPRALVGRGDLGEHSQSSSLLFD*LVALLQ
Trigger: CTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAGGCT...GGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526031.5
CDS-3UTR CCA 90 bp CTCTGGGGGCCAGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCGTCGATGGTTTTGTCTaGCGAAGGGGCAAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: LWGPGSPSGNVEILATGTVDGFV*RRGKGV
Trigger: GACACCTTTGCCCCTTCGCCAGACAAAACCATCGAC...GGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCTGGCCCCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp TGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCGTCGATGGTTTTGTCTaGCGAAGGGGCAAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: CAQSSGWQRRFGGTFSVFVDGFV*RRGKGV
Trigger: GACACCTTTGCCCCTTCGCCAGACAAAACCATCGAC...GAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR CCA 90 bp TGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCTATAGAGGCGAGCCTTaGTGCCATCATAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: CAQSSGWQRRFGGTFSVFYRGEP*CHHRAQ
Trigger: CTGAGCCCTATGATGGCACCAAGGCTCGCCTCTATA...GAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR CCA 90 bp ACAGGGGAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACATTACAGTAGGTTGCTaGGTCCGACTGCAGGCTATA +
Preference number: 4 (lower is better)
Translates to: TGELRWVAGWTRYPARQHITVGC*VRLQAI
Trigger: TATAGCCTGCAGTCGGACCCAGCAACCTACTGTAAT...GTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTCCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp CCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTTCCGGGGGCCCATCTaGTTCATTACAGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: PLPWVILLLAQVRVSGRDFRGPI*FITVGC
Trigger: GCAACCTACTGTAATGAACCAGATGGGCCCCCGGAA...ATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTGCTGGAACCATCTTaGTGTAGAGGGCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: VFSRKTQALLVRRIGFLSLLEPS*CRGPGW
Trigger: CCATCCGGGCCCTCTACACCAAGATGGTTCCAGCAG...GGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GAGCACAAAGGCTGGGTCTGTCTTCAGGAAGAAGAGCTTTTGCAGAAGCCTGATCTGCTGGAACCATCTTaGTGTAGAGGGCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: EHKGWVCLQEEELLQKPDLLEPS*CRGPGW
Trigger: CCATCCGGGCCCTCTACACCAAGATGGTTCCAGCAG...ATCAGGCTTCTGCAAAAGCTCTTCTTCCTGAAGACAGACCCAGCCTTTGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp CAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCATGGGAAACAGCTGCTaGAACCATCTTGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: QRRFGGTFSVFQGWAETSMGNSC*NHLGVE
Trigger: CTCTACACCAAGATGGTTCCAGCAGCTGTTTCCCAT...GCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGATGCCAGAATTCTGAATaGGAAACAGCTGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: GRGDLGEHSQSSRAGLRRCQNSE*ETAAGT
Trigger: GGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCA...TCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GAGCACAAAGGCTGGGTCTGTCTTCAGGAAGAAGAGCTTTTGCAGAAGCCTGATTCTTCACAGGGGCTCTaGGGGCCAGGTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: EHKGWVCLQEEELLQKPDSSQGL*GPGSPS
Trigger: TGAAGGAGAACCTGGCCCCCAGAGCCCCTGTGAAGA...ATCAGGCTTCTGCAAAAGCTCTTCTTCCTGAAGACAGACCCAGCCTTTGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGTTTGGGACAGGTCCTTaGGTAGCACTCGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALLVRRIGFLSLGSSYCWFGTGP*VALVPQ
Trigger: CTGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAA...CCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTGCCTCTAGCAGCTTTTaGGACAGGTCCTTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: LSLGSSYCWHKSEFLAGIASSSF*DRSLGS
Trigger: GCTACCCAAGGACCTGTCCCAAAAGCTGCTAGAGGC...AATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGCGGAGGCATCCACTTTaGAAAGTGCCATCTGCACCT +
Preference number: 4 (lower is better)
Translates to: PQEQWVFSRKTQALLVRRRRHPL*KVPSAP
Trigger: AGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCG...CCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCACAACTGTCACTTATTAGCTaGGAGAGCTTTGGACTGTTC +
Preference number: 4 (lower is better)
Translates to: APHSPRGAALPEWRVRAQLSLIS*ESFGLF
Trigger: GAACAGTCCAAAGCTCTCCCAGCTAATAAGTGACAG...TTGTGCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CCA 90 bp AGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGCTGTGCCCAGAGCTCTaGTTGGCAGAGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: SRKTQALLVRRIGFLSLGLCPEL*LAEEIW
Trigger: CCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG...CCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp AGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGACAAGTCAGAGTTTCTaGCCGGGATTTAGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SSGWQRRFGGTFSVFQGWTSQSF*PGFREP
Trigger: GGGCTCTCTAAATCCCGGCCAGAAACTCTGACTTGT...CCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTACAAGTCAGAGTTTCTaGCCGGGATTTAGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SGWQRRFGGTFSVFQGWATSQSF*PGFREP
Trigger: GGGCTCTCTAAATCCCGGCCAGAAACTCTGACTTGT...AGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp ACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCGCTAGAACTATCCCTTaGGACTTCCCAGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: TRICAQSSGWQRRFGGTFARTIP*DFPAGV
Trigger: GACTCCTGCTGGGAAGTCCCAAGGGATAGTTCTAGC...GAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGCTAGAACTATCCCTTaGGACTTCCCAGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: RALVGRGDLGEHSQSSRAARTIP*DFPAGV
Trigger: GACTCCTGCTGGGAAGTCCCAAGGGATAGTTCTAGC...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp ACAGGGGAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACTCCTCCGAGAGAGACTaGTGGTTTAGCTTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: TGELRWVAGWTRYPARQHSSERD*WFSFCL
Trigger: TAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGA...GTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTCCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TGCAGCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCCTGCCTGCTTATGTATaGACAGAGTATGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: CSPSFPQRCSFTRVEGESLPAYV*TEYVVS
Trigger: TGAGACAACATACTCTGTCCATACATAAGCAGGCAG...GCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GCTAAGGACTTGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGCATGGGGACAGTGCCTCTTACCCACTaGGATAGGAACCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: AKDLGASDMKKPWEGMGTVPLTH*DRNQNV
Trigger: CACATTTTGGTTCCTATCCCAGTGGGTAAGAGGCAC...TGTCCCCATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCGGAATGGAAAATGCCTaGGAGGGGGAGAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: GEEDRFPLPWVILLLAQVGMENA*EGESPK
Trigger: CTTGGGACTCTCCCCCTCCCAGGCATTTTCCATTCC...GACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TCCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGAGCCTTTCCAGGAATaGAAAATGCCTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SSGTVGVQQKNTGSSGEEEPFQE*KMPGRG
Trigger: CCCCCTCCCAGGCATTTTCCATTCCTGGAAAGGCTC...CTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGGAGCCTTTCCAGGAATaGAAAATGCCTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ALLVRRIGFLSLGSSYCWEPFQE*KMPGRG
Trigger: CCCCCTCCCAGGCATTTTCCATTCCTGGAAAGGCTC...CCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGGCAGCTTTACCAGAGTaGAGGGTGAGAGCACAAAGG +
Preference number: 4 (lower is better)
Translates to: VSASSERDWWFSFCLHRQAALPE*RVRAQR
Trigger: CCTTTGTGCTCTCACCCTCCACTCTGGTAAAGCTGC...CTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR CAA 72 bp GGCCCTCCCTGCCTGCTTATGTATGGACAGAGTATGTaGTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: GPPCLLMYGQSM*SQLPPRETGGL
Trigger: TAAACCACCAGTCTCTCTCGGAGGAAGCTGAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTCAGAGGACTTCTCTTTaGCTGCTTGGTAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RALVGRGDLGEHSQSSRAQRTSL*LLGSSA
Trigger: AGCAGAGCTACCAAGCAGTCAAAGAGAAGTCCTCTG...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR TCA 90 bp CTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACCCGATGCCAGAATTCTaGATGGGAAACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLVRRIGFLSLGSSYCWHPMPEF*MGNSCW
Trigger: CCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGG...GTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp TCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTTGGAGATATGAGGCTCGCTTCCCTCTaGCCCACCAGGCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: SGNVEILATGTFASFGDMRLASL*PTRPTH
Trigger: GTGAGTGGGCCTGGTGGGTCAGAGGGAAGCGAGCCT...CATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR TCA 90 bp CTCTGGGGGCCAGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCCTAAGGTCAAGAACTTaGCCCTCTATCCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: LWGPGSPSGNVEILATGTLRSRT*PSIHPG
Trigger: TCCAGGGTGGATAGAGGGTCAAGTTCTTGACCTTAG...GGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCTGGCCCCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR TCA 90 bp AGTCCCAAGAGAGGCAAATTTCCCAGAGATAAGTGCCTCTTACCCACTGGGATATGGGTGCATCCGACATaGAGAAGCCCTGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPKRGKFPRDKCLLPTGIWVHPT*RSPGKA
Trigger: TGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCA...TATCCCAGTGGGTAAGAGGCACTTATCTCTGGGAAATTTGCCTCTCTTGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp GTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCCCTTTCACTCATTGGTaGGCACACCAGATTAGGTAC +
Preference number: 4 (lower is better)
Translates to: VPRALVGRGDLGEHSQSSPFTHW*AHQIRY
Trigger: GTACCTAATCTGGTGTGCTCACCAATGAGTGAAAGG...GGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp GCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCACAACCTTTCAGCTTCGGGTaGATCACTTTAATGCTGTTA +
Preference number: 4 (lower is better)
Translates to: APHSPRGAALPEWRVRAQPFSFG*ITLMLL
Trigger: TAACAGCATTAAAGTGATTCACCCGAAGCTGAAAGG...TTGTGCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR GCA 90 bp TTGGCCACAGGAACCTTTGCCTCTTTTGGAGATATGGGTGAAATGCCCATGAGCGTACAGGCCGTGTCATaGTGCACCACCTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: LATGTFASFGDMGEMPMSVQAVS*CTTWVN
Trigger: GTTTACCCAGGTGGTGCAGCATGACACGGCCTGTAC...GCTCATGGGCATTTCACCCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR GCA 90 bp GAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTGCCCCGGGAACAGGCTaGAATAGCCAGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: EDRFPLPWVILLLAQVRVAPGTG*NSQLLL
Trigger: AAGGAGAAGCTGGCTATTGCAGCCTGTTCCCGGGGC...AACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR GCA 90 bp ACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCATAGGGCTCAGCTGTaGCAGACGGTGTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: TVGVQQKNTGSSGEEDRFHRAQL*QTVCPS
Trigger: TGATGGGCACACCGTCTGGCACAGCTGAGCCCTATG...AAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp AGTCCCAAGAGAGGCAAATTTCCCAGAGATAAGTGCCTCTTACCCACTGGGATAAGAGGCGAGCCTTGGTaGCATCATAGGGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPKRGKFPRDKCLLPTGIRGEPW*HHRAQL
Trigger: CAGCTGAGCCCTATGATGGCACCAAGGCTCGCCTCT...TATCCCAGTGGGTAAGAGGCACTTATCTCTGGGAAATTTGCCTCTCTTGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTTTCATTACAGTAGGTTaGTGGGTCCGACTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RALVGRGDLGEHSQSSRAFITVG*WVRLQA
Trigger: AGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAA...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGTTCATTACAGTAGGTTaGTGGGTCCGACTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VSASSERDWWFSFCLHRQFITVG*WVRLQA
Trigger: AGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAA...CTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp GCTCCTGCTCTAACTGATGGACTTTATAGAAATACCGATGCCAGAATTCTGAATCTCTGTTCCGCCCGCTaGTTCAGGGCGTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: APALTDGLYRNTDARILNLCSAR*FRASLR
Trigger: CCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAG...ATTCAGAATTCTGGCATCGGTATTTCTATAAAGTCCATCAGTTAGAGCAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR GCA 90 bp AGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCGGGCTCTTCAGAGATaGTCTGTTCCGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RIGFLSLGSSYCWHKSEFRALQR*SVPPAA
Trigger: AGCAGCGGGCGGAACAGAGCATCTCTGAAGAGCCCG...AAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp ATTTTGGCCACAGGAACCTTTGCCTCTTTTGGAGATATGGGTGAAATGCCCATGCGGGCTCTTCAGAGATaGTCTGTTCCGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: ILATGTFASFGDMGEMPMRALQR*SVPPAA
Trigger: AGCAGCGGGCGGAACAGAGCATCTCTGAAGAGCCCG...CATGGGCATTTCACCCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR GCA 90 bp ACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCGGCCACAGGAACCTTTaGCTCTTTTGGAGATATGGG +
Preference number: 4 (lower is better)
Translates to: TRICAQSSGWQRRFGGTFGHRNL*LFWRYG
Trigger: CCCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCC...GAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp TCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTATCCACTTTGGAAAGTaGCATCTGCACCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SGWQRRFGGTFSVFQGWAIHFGK*HLHLLF
Trigger: GAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGAT...AGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp TCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTTAGCCACCAGAATCTGTaGCCAGAGCTCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SPLGHPIVGTSQSFWPGFSHQNL*PELWLA
Trigger: TGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCT...AAATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp AGCTGGGCTAAGGACTTGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGCATGTTTCCCAGAGATAAGTaGCTCTTACCCACTGGGATA +
Preference number: 4 (lower is better)
Translates to: SWAKDLGASDMKKPWEGMFPRDK*LLPTGI
Trigger: TATCCCAGTGGGTAAGAGGCACTTATCTCTGGGAAA...CATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp ATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTGGACAAGGTATCCTaGCAGGCAACACACAGAAGG +
Preference number: 4 (lower is better)
Translates to: ICAQSSGWQRRFGGTFSVLDKVS*QATHRR
Trigger: CCTTCTGTGTGTTGCCTGGCAGGATACCTTGTCCAA...GACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp ACAGGGGAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACTTCCGCCATCTTGCCTaGATGACATCACCACTATTT +
Preference number: 4 (lower is better)
Translates to: TGELRWVAGWTRYPARQHFRHLA*MTSPLF
Trigger: AAATAGTGGTGATGTCATGCAGGCAAGATGGCGGAA...GTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTCCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR CCA 90 bp AAATGTGTTCACTGTCCCTGTTTAGCCAAGGGTAGGTGGCATGGCCCTCCCTGCATTACAGTAGGTTGCTaGGTCCGACTGCAGGCTATA +
Preference number: 4 (lower is better)
Translates to: KCVHCPCLAKGRWHGPPCITVGC*VRLQAI
Trigger: TATAGCCTGCAGTCGGACCCAGCAACCTACTGTAAT...GCAGGGAGGGCCATGCCACCTACCCTTGGCTAAACAGGGACAGTGAACACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp AGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTGTGCCTCAGGTGCAGTaGCCGGGTTGGCGATCTGTG +
Preference number: 4 (lower is better)
Translates to: RFSFRECRNFGHRNLCLFVPQVQ*PGWRSV
Trigger: CACAGATCGCCAACCCGGCCACTGCACCTGAGGCAC...AAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp AGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTACACCCGTAAGTCTGTaGGCGCCTCCTCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RIGFLSLGSSYCWHKSEFTPVSL*APPPSE
Trigger: CTCTGAGGGAGGAGGCGCCCACAGACTTACGGGTGT...AAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCCGGAGGCATCCACTTTaGAAAGTGCCATCTGCACCT +
Preference number: 4 (lower is better)
Translates to: QKNTGSSGEEDRFPLPWVRRHPL*KVPSAP
Trigger: AGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCG...GACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGCGGAGGCATCCACTTTaGAAAGTGCCATCTGCACCT +
Preference number: 4 (lower is better)
Translates to: GSSGEEDRFPLPWVILLLRRHPL*KVPSAP
Trigger: AGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCG...CAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGAAGGATGTCTCCTGAGTGCTaGTCACCATGTCTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: QLPPRETGGLASVYTGRRMSPEC*SPCLRQ
Trigger: TTGCCTGAGACATGGTGACCAGCACTCAGGAGACAT...CCTTCTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CCA 90 bp CAACACCCTAATTCCCAGCTCAAGTCTCCCCACGGAACGTTTTCTTGCTTTGTTAGGCCACTGCCTGAGTaGCACTGTGGCCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: QHPNSQLKSPHGTFSCFVRPLPE*HCGQKQ
Trigger: CTGCTTTTGGCCACAGTGCCACTCAGGCAGTGGCCT...AACAAAGCAAGAAAACGTTCCGTGGGGAGACTTGAGCTGGGAATTAGGGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CCA 90 bp GGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGATTGGCAGAGGAGATTTaGGGGAACATTCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: GRGDLGEHSQSSRAGLRRLAEEI*GNILSL
Trigger: AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAA...TCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp AGTCCCAAGAGAGGCAAATTTCCCAGAGATAAGTGCCTCTTACCCACTGGGATAGCCCAGAGCTCTGGTTaGCAGAGGAGATTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SPKRGKFPRDKCLLPTGIAQSSG*QRRFGG
Trigger: TCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGC...TATCCCAGTGGGTAAGAGGCACTTATCTCTGGGAAATTTGCCTCTCTTGGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACAAGTCCTCAGGAACAGTaGGTGTTCAGCAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: ATRICAQSSGWQRRFGGTSPQEQ*VFSRKT
Trigger: TGTTTTTCTGCTGAACACCCACTGTTCCTGAGGACT...TGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGTCCTCAGGAACAGTaGGTGTTCAGCAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: LVGRGDLGEHSQSSRAGLSPQEQ*VFSRKT
Trigger: TGTTTTTCTGCTGAACACCCACTGTTCCTGAGGACT...CAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGTTGAGGTGGGTAGCTaGTTGGACAAGGTATCCTGC +
Preference number: 4 (lower is better)
Translates to: GSSGEEDRFPLPWVILLLVEVGS*LDKVSC
Trigger: GCAGGATACCTTGTCCAACCAGCTACCCACCTCAAC...CAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TATGTTGTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACGGAAAGCAGAGGCACTaGGAGTGCAGAGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: YVVSASSERDWWFSFCLHGKQRH*ECRDGL
Trigger: GAGGCCATCTCTGCACTCCCAGTGCCTCTGCTTTCC...GTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGACAACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR TCA 90 bp CTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTCAGAGGACTTCTCTTTaGCTGCTTGGTAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSLGSSYCWHKSEFLAGIQRTSL*LLGSSA
Trigger: AGCAGAGCTACCAAGCAGTCAAAGAGAAGTCCTCTG...AATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp TGGACAGAGTATGTTGTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCCTTCTCTGTTGCTCCTaGGGAGCCTTCCGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: WTEYVVSASSERDWWFSFLLCCS*GAFRLY
Trigger: ATACAGACGGAAGGCTCCTCAGGAGCAACAGAGAAG...GAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGACAACATACTCTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp TCCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGCTAAGGTCAAGAACTTaGCCCTCTATCCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: SSGTVGVQQKNTGSSGEELRSRT*PSIHPG
Trigger: TCCAGGGTGGATAGAGGGTCAAGTTCTTGACCTTAG...CTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp AGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTATGGAGGCCACTGCCTaGGTGGCACTGTGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: RIGFLSLGSSYCWHKSEFMEATA*VALWPK
Trigger: TTTTGGCCACAGTGCCACTCAGGCAGTGGCCTCCAT...AAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp AGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCCAGACACCACAAGGTaGTGGCTGCCTACAGGAACC +
Preference number: 4 (lower is better)
Translates to: RIGFLSLGSSYCWHKSEFPDTTR*WLPTGT
Trigger: GGTTCCTGTAGGCAGCCATCACCTTGTGGTGTCTGG...AAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp GGCATGGCCCTCCCTGCCTGCTTATGTATGGACAGAGTATGTTGTCTCAGCTTCCCTTTCACTCATTGGTaGGCACACCAGATTAGGTAC +
Preference number: 4 (lower is better)
Translates to: GMALPACLCMDRVCCLSFPFTHW*AHQIRY
Trigger: GTACCTAATCTGGTGTGCTCACCAATGAGTGAAAGG...GAAGCTGAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp AGGCCAAGTATATACTCAGGCCTCATACCTGAGGACCACAACTCAGAAGGTCAGGGTTTGAAGTGGAAGTaGCCTCACTCTCTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: RPSIYSGLIPEDHNSEGQGLKWK*PHSLGV
Trigger: GACACCGAGAGAGTGAGGTCACTTCCACTTCAAACC...CTGACCTTCTGAGTTGTGGTCCTCAGGTATGAGGCCTGAGTATATACTTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp CTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACCCCTCACTGAAGGTTTaGAGTGGAAGTGACCTCACT +
Preference number: 4 (lower is better)
Translates to: LLVRRIGFLSLGSSYCWHPSLKV*SGSDLT
Trigger: AGTGAGGTCACTTCCACTTCAAACCTTCAGTGAGGG...GTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp TCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGAGGCCACAGGAACCTTTaGCTCTTTTGGAGATATGGG +
Preference number: 4 (lower is better)
Translates to: SQLPPRETGGLASVYTGRGHRNL*LFWRYG
Trigger: CCCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCC...TCTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp GGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCGGCCACAGGAACCTTTaGCTCTTTTGGAGATATGGG +
Preference number: 4 (lower is better)
Translates to: GEEDRFPLPWVILLLAQVGHRNL*LFWRYG
Trigger: CCCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCC...GACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGGCCACAGGAACCTTTaGCTCTTTTGGAGATATGGG +
Preference number: 4 (lower is better)
Translates to: GSSGEEDRFPLPWVILLLGHRNL*LFWRYG
Trigger: CCCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCC...CAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp TCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTTGTGTCACGAGGGAGATaGTCTCACTGCTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: SPLGHPIVGTSQSFWPGFVSRGR*SHCSLM
Trigger: CATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACAC...AAATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCGTGTCACGAGGGAGATaGTCTCACTGCTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: VFSRKTQALLVRRIGFLSVSRGR*SHCSLM
Trigger: CATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACAC...GGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTTCTACATCTTCCAGCTaGAAATGGGAGGGGGTAATG +
Preference number: 4 (lower is better)
Translates to: RALVGRGDLGEHSQSSRASTSSS*KWEGVM
Trigger: CATTACCCCCTCCCATTTGCAGCTGGAAGATGTAGA...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR GCA 90 bp GAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTGGCATGGCCCTCCCTaGCTGCTTATGTATGGACAG +
Preference number: 4 (lower is better)
Translates to: EDRFPLPWVILLLAQVRVWHGPP*LLMYGQ
Trigger: CTGTCCATACATAAGCAGGCAGGGAGGGCCATGCCA...AACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp GGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCTTGGACAAGGTATCCTaGCAGGCAACACACAGAAGG +
Preference number: 4 (lower is better)
Translates to: GEEDRFPLPWVILLLAQVLDKVS*QATHRR
Trigger: CCTTCTGTGTGTTGCCTGGCAGGATACCTTGTCCAA...GACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTTTGGCCGTGGCTGCGATaGTACAGGCCGTGTCATGCT +
Preference number: 4 (lower is better)
Translates to: GSPSGNVEILATGTFASFWPWLR*YRPCHA
Trigger: AGCATGACACGGCCTGTACCATCGCAGCCACGGCCA...AAAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CCA 90 bp TCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTTGTCGATGGTTTTGTCTaGCGAAGGGGCAAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: SPLGHPIVGTSQSFWPGFVDGFV*RRGKGV
Trigger: GACACCTTTGCCCCTTCGCCAGACAAAACCATCGAC...AAATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GAGCACAAAGGCTGGGTCTGTCTTCAGGAAGAAGAGCTTTTGCAGAAGCCTGATTATAGAGGCGAGCCTTaGTGCCATCATAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: EHKGWVCLQEEELLQKPDYRGEP*CHHRAQ
Trigger: CTGAGCCCTATGATGGCACCAAGGCTCGCCTCTATA...ATCAGGCTTCTGCAAAAGCTCTTCTTCCTGAAGACAGACCCAGCCTTTGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GAGCACAAAGGCTGGGTCTGTCTTCAGGAAGAAGAGCTTTTGCAGAAGCCTGATTTCCGGGGGCCCATCTaGTTCATTACAGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: EHKGWVCLQEEELLQKPDFRGPI*FITVGC
Trigger: GCAACCTACTGTAATGAACCAGATGGGCCCCCGGAA...ATCAGGCTTCTGCAAAAGCTCTTCTTCCTGAAGACAGACCCAGCCTTTGTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp AGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTTGTAGAGGGCCCGGATaGAGGGGCTGCCTACAAGGA +
Preference number: 4 (lower is better)
Translates to: RFSFRECRNFGHRNLCLFCRGPG*RGCLQG
Trigger: TCCTTGTAGGCAGCCCCTCCATCCGGGCCCTCTACA...AAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CCA 90 bp GAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGTTGGCAGAGGAGATTTaGGGGAACATTCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: ELWLAEEIWGNILSLPGLLAEEI*GNILSL
Trigger: AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAA...CAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGTCCTCCGAGAGAGACTaGTGGTTTAGCTTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: FLSLGSSYCWHKSEFLAGSSERD*WFSFCL
Trigger: TAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGA...CCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGTCAGGGTTTGGTCTCTaGATTCTGAACCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: FLSLGSSYCWHKSEFLAGSGFGL*ILNPKG
Trigger: TCCTTTGGGGTTCAGAATCCAGAGACCAAACCCTGA...CCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTTGCAGCTTTACCAGAGTaGAGGGTGAGAGCACAAAGG +
Preference number: 4 (lower is better)
Translates to: SPLGHPIVGTSQSFWPGFAALPE*RVRAQR
Trigger: CCTTTGTGCTCTCACCCTCCACTCTGGTAAAGCTGC...AAATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp CCAGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTGCTGGGGGCTCAACTaGAGTCACCAGATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PGSPSGNVEILATGTFASCWGLN*SHQILF
Trigger: GAAGAGAATCTGGTGACTTCAGTTGAGCCCCCAGCA...AGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR TCA 90 bp CCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTTCAGTTTCCCATCATaGAAAAGGAGGCCCTTCACA +
Preference number: 4 (lower is better)
Translates to: PLPWVILLLAQVRVSGRDFSFPS*KRRPFT
Trigger: TGTGAAGGGCCTCCTTTTTCATGATGGGAAACTGAA...ATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp GTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGTGCAAAATACTCCTaGGTAGGTAAAATACTCCCC +
Preference number: 4 (lower is better)
Translates to: VPRALVGRGDLGEHSQSSSAKYS*VGKILP
Trigger: GGGGAGTATTTTACCTACTCAGGAGTATTTTGCACT...GGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp AGTCCCAAGAGAGGCAAATTTCCCAGAGATAAGTGCCTCTTACCCACTGGGATAGTAAGTACTCGGCTTTaGTCACCGCTCTGTACCGCT +
Preference number: 4 (lower is better)
Translates to: SPKRGKFPRDKCLLPTGIVSTRL*SPLCTA
Trigger: AGCGGTACAGAGCGGTGATCAAAGCCGAGTACTTAC...TATCCCAGTGGGTAAGAGGCACTTATCTCTGGGAAATTTGCCTCTCTTGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp ATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCATGACCAAGAGCAACTaGAGCCATTCTTGTTGCAAC +
Preference number: 4 (lower is better)
Translates to: ICAQSSGWQRRFGGTFSVMTKSN*SHSCCN
Trigger: GTTGCAACAAGAATGGCTTCAGTTGCTCTTGGTCAT...GACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR GCA 90 bp AGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTCAGGCCGTGTCATGCTaGACCACCTGGGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: RFSFRECRNFGHRNLCLFQAVSC*TTWVNS
Trigger: GGAGTTTACCCAGGTGGTGCAGCATGACACGGCCTG...AAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR GCA 90 bp TATGTTGTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACGGGAGATGCTCTCACTaGTCTCTGATGGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: YVVSASSERDWWFSFCLHGRCSH*SLMESP
Trigger: AGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCC...GTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGACAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp ACCGATGCCAGAATTCTGAATGGGAAACAGCTGCTGGAACCATCTTGGTGTAGAGTGTCACGAGGGAGATaGTCTCACTGCTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: TDARILNGKQLLEPSWCRVSRGR*SHCSLM
Trigger: CATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACAC...TCTACACCAAGATGGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR GCA 90 bp TCCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGATCCACTTTGGAAAGTaGCATCTGCACCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSGTVGVQQKNTGSSGEEIHFGK*HLHLLF
Trigger: GAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGAT...CTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp AGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGATCCACTTTGGAAAGTaGCATCTGCACCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SRKTQALLVRRIGFLSLGIHFGK*HLHLLF
Trigger: GAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGAT...CCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR GCA 90 bp GGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCGGAACTGAGGAAAAGTaGAGCCTGCTGATGACCAAT +
Preference number: 4 (lower is better)
Translates to: GEEDRFPLPWVILLLAQVGTEEK*SLLMTN
Trigger: ATTGGTCATCAGCAGGCTGCACTTTTCCTCAGTTCC...GACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR GCA 90 bp TCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTTATGGCCCTCCCTGCCTaGTTATGTATGGACAGAGTA +
Preference number: 4 (lower is better)
Translates to: SPLGHPIVGTSQSFWPGFMALPA*LCMDRV
Trigger: TACTCTGTCCATACATAAGCAGGCAGGGAGGGCCAT...AAATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR GCA 90 bp CCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGTTTCCCAGAGATAAGTaGCTCTTACCCACTGGGATA +
Preference number: 4 (lower is better)
Translates to: PQEQWVFSRKTQALLVRRFPRDK*LLPTGI
Trigger: TATCCCAGTGGGTAAGAGGCACTTATCTCTGGGAAA...CCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp CTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTATTACAGTAGGTTGCTaGGTCCGACTGCAGGCTATA +
Preference number: 4 (lower is better)
Translates to: LSLGSSYCWHKSEFLAGIITVGC*VRLQAI
Trigger: TATAGCCTGCAGTCGGACCCAGCAACCTACTGTAAT...AATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp ACCGATGCCAGAATTCTGAATGGGAAACAGCTGCTGGAACCATCTTGGTGTAGATTCCGGGGGCCCATCTaGTTCATTACAGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: TDARILNGKQLLEPSWCRFRGPI*FITVGC
Trigger: GCAACCTACTGTAATGAACCAGATGGGCCCCCGGAA...TCTACACCAAGATGGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp AGTCCCAAGAGAGGCAAATTTCCCAGAGATAAGTGCCTCTTACCCACTGGGATATTCCGGGGGCCCATCTaGTTCATTACAGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: SPKRGKFPRDKCLLPTGIFRGPI*FITVGC
Trigger: GCAACCTACTGTAATGAACCAGATGGGCCCCCGGAA...TATCCCAGTGGGTAAGAGGCACTTATCTCTGGGAAATTTGCCTCTCTTGGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp CTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACATGGGAAACAGCTGCTaGAACCATCTTGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: LLVRRIGFLSLGSSYCWHMGNSC*NHLGVE
Trigger: CTCTACACCAAGATGGTTCCAGCAGCTGTTTCCCAT...GTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACTGCCAGAATTCTGAATaGGAAACAGCTGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: LLVRRIGFLSLGSSYCWHCQNSE*ETAAGT
Trigger: GGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCA...GTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGTGCCAGAATTCTGAATaGGAAACAGCTGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: GSSGEEDRFPLPWVILLLCQNSE*ETAAGT
Trigger: GGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCA...CAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp AGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTTCTTCACAGGGGCTCTaGGGGCCAGGTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RFSFRECRNFGHRNLCLFSSQGL*GPGSPS
Trigger: TGAAGGAGAACCTGGCCCCCAGAGCCCCTGTGAAGA...AAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CCA 90 bp AGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTGCCTCTAGCAGCTTTTaGGACAGGTCCTTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: RIGFLSLGSSYCWHKSEFASSSF*DRSLGS
Trigger: GCTACCCAAGGACCTGTCCCAAAAGCTGCTAGAGGC...AAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGTGTCCCTGACCCACGATCCCTTTCACTCATTGGTGAGCACACCAGATTAGGTAAGTTACTTAGTCTTTaGGTGAATGGAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GVPDPRSLSLIGEHTRLGKLLSL*VNGGHC
Trigger: GCAGTGGCCTCCATTCACCCAAAGACTAAGTAACTT...ACCTAATCTGGTGTGCTCACCAATGAGTGAAAGGGATCGTGGGTCAGGGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CCA 90 bp CACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTTTGGCAGAGGAGATTTaGGGGAACATTCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: HQNLCPELWLAEEIWGNILAEEI*GNILSL
Trigger: AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAA...AATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTTTGGCAGAGGAGATTTaGGGGAACATTCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LCPELWLAEEIWGNILSLLAEEI*GNILSL
Trigger: AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAA...AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp CCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTTGGCAGAGGAGATTTaGGGGAACATTCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: PLPWVILLLAQVRVSGRDLAEEI*GNILSL
Trigger: AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAA...ATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GTAGGTGGCATGGCCCTCCCTGCCTGCTTATGTATGGACAGAGTATGTTGTCTCAGTCCTCAGGAACAGTaGGTGTTCAGCAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: VGGMALPACLCMDRVCCLSPQEQ*VFSRKT
Trigger: TGTTTTTCTGCTGAACACCCACTGTTCCTGAGGACT...GAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCCATGCCACCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGCTGCCTGCTTATGTATaGACAGAGTATGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: ELWLAEEIWGNILSLPGLLPAYV*TEYVVS
Trigger: TGAGACAACATACTCTGTCCATACATAAGCAGGCAG...CAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGGTGCCTCTTACCCACTaGGATAGGAACCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: ALLVRRIGFLSLGSSYCWVPLTH*DRNQNV
Trigger: CACATTTTGGTTCCTATCCCAGTGGGTAAGAGGCAC...CCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TCCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGTCAGGGTTTGGTCTCTaGATTCTGAACCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: SSGTVGVQQKNTGSSGEESGFGL*ILNPKG
Trigger: TCCTTTGGGGTTCAGAATCCAGAGACCAAACCCTGA...CTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
3UTR CAA 72 bp GAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTaGGCACAAGTCAGAGTTTCTGGCCGGGATTTAGAG +
Preference number: 4 (lower is better)
Translates to: EDRFPLPWVILL*AQVRVSGRDLE
Trigger: CTCTAAATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
3UTR CAA 72 bp GAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATaGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTTA +
Preference number: 4 (lower is better)
Translates to: EEDRFPLPWVIL*LAQVRVSGRDL
Trigger: TAAATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
3UTR CAA 72 bp TCACTGATGTCCGTGCTTGAGCCTTTCTTTCCATTGTaGGAGGGTGTAGACTTCCCACTATCCGAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SLMSVLEPFFPL*EGVDFPLSEFS
Trigger: GCTGAACTCGGATAGTGGGAAGTCTACACCCTCCAACAATGGAAAGAAAGGCTCAAGCACGGACATCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR TCA 90 bp ATTTTGGCCACAGGAACCTTTGCCTCTTTTGGAGATATGGGTGAAATGCCCATGCCGATGCCAGAATTCTaGATGGGAAACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ILATGTFASFGDMGEMPMPMPEF*MGNSCW
Trigger: CCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGG...CATGGGCATTTCACCCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR TCA 90 bp AGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTTGCTGGGGGCTCAACTaGAGTCACCAGATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RIGFLSLGSSYCWHKSEFCWGLN*SHQILF
Trigger: GAAGAGAATCTGGTGACTTCAGTTGAGCCCCCAGCA...AAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR TCA 90 bp GAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGTTTCTCAGGCAATTTTaGTACAGAGCTAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: ELWLAEEIWGNILSLPGLFLRQF*YRAKVK
Trigger: CTTGACCTTAGCTCTGTATCAAAATTGCCTGAGAAA...CAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp CTTCGGGTGAATCACTTTAATGCTGTTAACGGCAAGTCTGTAAAAGGTTCAGGATGGGTGCATCCGACATaGAGAAGCCCTGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LRVNHFNAVNGKSVKGSGWVHPT*RSPGKA
Trigger: TGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCA...TCCTGAACCTTTTACAGACTTGCCGTTAACAGCATTAAAGTGATTCACCCGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR TCA 90 bp AGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTATCCCACCCCCTCACTaGAGGTTTGAAGTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RIGFLSLGSSYCWHKSEFIPPPH*RFEVEV
Trigger: CACTTCCACTTCAAACCTTCAGTGAGGGGGTGGGAT...AAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp AGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGAAATCAACAGTGAACTaGGACCTTGTCTCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RRFGGTFSVFQGWAETSEKSTVN*DLVSFF
Trigger: AAAGAAAGAGACAAGGTCTCAGTTCACTGTTGATTT...CTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444377.5
CDS-3UTR GCA 90 bp CTTCGGGTGAATCACTTTAATGCTGTTAACGGCAAGTCTGTAAAAGGTTCAGGACATAGGGCTCAGCTGTaGCAGACGGTGTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: LRVNHFNAVNGKSVKGSGHRAQL*QTVCPS
Trigger: TGATGGGCACACCGTCTGGCACAGCTGAGCCCTATG...TCCTGAACCTTTTACAGACTTGCCGTTAACAGCATTAAAGTGATTCACCCGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR GCA 90 bp TTGGCCACAGGAACCTTTGCCTCTTTTGGAGATATGGGTGAAATGCCCATGAGCGGAACTGAGGAAAAGTaGAGCCTGCTGATGACCAAT +
Preference number: 4 (lower is better)
Translates to: LATGTFASFGDMGEMPMSGTEEK*SLLMTN
Trigger: ATTGGTCATCAGCAGGCTGCACTTTTCCTCAGTTCC...GCTCATGGGCATTTCACCCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp TTGGCCACAGGAACCTTTGCCTCTTTTGGAGATATGGGTGAAATGCCCATGAGCTGCCAGAATTCTGAATaGGAAACAGCTGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: LATGTFASFGDMGEMPMSCQNSE*ETAAGT
Trigger: GGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCA...GCTCATGGGCATTTCACCCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CCA 90 bp AGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTGCCTCTAGCAGCTTTTaGGACAGGTCCTTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: RFSFRECRNFGHRNLCLFASSSF*DRSLGS
Trigger: GCTACCCAAGGACCTGTCCCAAAAGCTGCTAGAGGC...AAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp ACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTACAAGTCAGAGTTTCTaGCCGGGATTTAGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: TVGVQQKNTGSSGEEDRFTSQSF*PGFREP
Trigger: GGGCTCTCTAAATCCCGGCCAGAAACTCTGACTTGT...AAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGAGTCCTCAGGAACAGTaGGTGTTCAGCAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: GSSGEEDRFPLPWVILLLSPQEQ*VFSRKT
Trigger: TGTTTTTCTGCTGAACACCCACTGTTCCTGAGGACT...CAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGACTGCCTGCTTATGTATaGACAGAGTATGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: SSPLGHPIVGTSQSFWPGLPAYV*TEYVVS
Trigger: TGAGACAACATACTCTGTCCATACATAAGCAGGCAG...TCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp CATGTCTCTCTAATCTGTCCACCTCTTTCTAACAGGCTCATAAGTTACATGATGGGGGACAGACCAGCGTaGGCTGGAGGAAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HVSLICPPLSNRLISYMMGDRPA*AGGKEG
Trigger: TCCTTCCTTTCCTCCAGCCCACGCTGGTCTGTCCCC...CATCATGTAACTTATGAGCCTGTTAGAAAGAGGTGGACAGATTAGAGAGACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp CAACACCCTAATTCCCAGCTCAAGTCTCCCCACGGAACGTTTTCTTGCTTTGTTATCACTAATGTCTCCTaGGTGCTGGTCACCATGTCT +
Preference number: 4 (lower is better)
Translates to: QHPNSQLKSPHGTFSCFVITNVS*VLVTMS
Trigger: AGACATGGTGACCAGCACTCAGGAGACATTAGTGAT...AACAAAGCAAGAAAACGTTCCGTGGGGAGACTTGAGCTGGGAATTAGGGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR TCA 90 bp CAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCGCCTCTCAATCTAAATaGGCCACTTTTGATTCTGAG +
Preference number: 4 (lower is better)
Translates to: QKNTGSSGEEDRFPLPWVASQSK*ATFDSE
Trigger: CTCAGAATCAAAAGTGGCTCATTTAGATTGAGAGGC...GACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR GCA 90 bp ATTTTGGCCACAGGAACCTTTGCCTCTTTTGGAGATATGGGTGAAATGCCCATGGGCCACAGGAACCTTTaGCTCTTTTGGAGATATGGG +
Preference number: 4 (lower is better)
Translates to: ILATGTFASFGDMGEMPMGHRNL*LFWRYG
Trigger: CCCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCC...CATGGGCATTTCACCCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR GCA 90 bp ACCGATGCCAGAATTCTGAATGGGAAACAGCTGCTGGAACCATCTTGGTGTAGAATCCACTTTGGAAAGTaGCATCTGCACCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TDARILNGKQLLEPSWCRIHFGK*HLHLLF
Trigger: GAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGAT...TCTACACCAAGATGGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR GCA 90 bp ACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTATCCACTTTGGAAAGTaGCATCTGCACCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TVGVQQKNTGSSGEEDRFIHFGK*HLHLLF
Trigger: GAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGAT...AAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp GAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTATGGGAAACAGCTGCTaGAACCATCTTGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: EDRFPLPWVILLLAQVRVMGNSC*NHLGVE
Trigger: CTCTACACCAAGATGGTTCCAGCAGCTGTTTCCCAT...AACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CCA 90 bp TATGTTGTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACATGGGAAACAGCTGCTaGAACCATCTTGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: YVVSASSERDWWFSFCLHMGNSC*NHLGVE
Trigger: CTCTACACCAAGATGGTTCCAGCAGCTGTTTCCCAT...GTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGACAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp GCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGATGGAAGGACTCATGTaGTTCTTATGTGACAGTGGA +
Preference number: 4 (lower is better)
Translates to: ALLVRRIGFLSLGSSYCWMEGLM*FLCDSG
Trigger: TCCACTGTCACATAAGAACCACATGAGTCCTTCCAT...CCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CCA 90 bp TATGTTGTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACTCCTCCGAGAGAGACTaGTGGTTTAGCTTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: YVVSASSERDWWFSFCLHSSERD*WFSFCL
Trigger: TAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGA...GTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGACAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR TCA 90 bp TCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTTGGAGATATGCCGATGCCAGAATTCTaGATGGGAAACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGNVEILATGTFASFGDMPMPEF*MGNSCW
Trigger: CCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGG...CATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR TCA 90 bp GCTCCTGCTCTAACTGATGGACTTTATAGAAATACCGATGCCAGAATTCTGAATTGGGTGAAATGCCCATaGGCTCCTCTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: APALTDGLYRNTDARILNWVKCP*APLPPP
Trigger: AGGAGGAGGAAGAGGAGCTCATGGGCATTTCACCCA...ATTCAGAATTCTGGCATCGGTATTTCTATAAAGTCCATCAGTTAGAGCAGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR TCA 90 bp TTCTCTTCACAGGGGCTCTGGGGGCCAGGTTCTCCTTCAGGGAATGTAGAAATTTTTCTCAGGCAATTTTaGTACAGAGCTAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: FSSQGLWGPGSPSGNVEIFLRQF*YRAKVK
Trigger: CTTGACCTTAGCTCTGTATCAAAATTGCCTGAGAAA...AATTTCTACATTCCCTGAAGGAGAACCTGGCCCCCAGAGCCCCTGTGAAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR GCA 90 bp GCTCTAACTGATGGACTTTATAGAAATACCGATGCCAGAATTCTGAATGGGAAACAGGCCGTGTCATGCTaGACCACCTGGGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: ALTDGLYRNTDARILNGKQAVSC*TTWVNS
Trigger: GGAGTTTACCCAGGTGGTGCAGCATGACACGGCCTG...TTTCCCATTCAGAATTCTGGCATCGGTATTTCTATAAAGTCCATCAGTTAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR GCA 90 bp ACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTTTTCCCAGAGATAAGTaGCTCTTACCCACTGGGATA +
Preference number: 4 (lower is better)
Translates to: TVGVQQKNTGSSGEEDRFFPRDK*LLPTGI
Trigger: TATCCCAGTGGGTAAGAGGCACTTATCTCTGGGAAA...AAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp TATGTTGTCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGTCCTCAGGAACAGTaGGTGTTCAGCAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: YVVSASSERDWWFSFCLHSPQEQ*VFSRKT
Trigger: TGTTTTTCTGCTGAACACCCACTGTTCCTGAGGACT...GTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGACAACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CCA 90 bp AGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTATTACAGTAGGTTGCTaGGTCCGACTGCAGGCTATA +
Preference number: 4 (lower is better)
Translates to: RFSFRECRNFGHRNLCLFITVGC*VRLQAI
Trigger: TATAGCCTGCAGTCGGACCCAGCAACCTACTGTAAT...AAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CCA 90 bp TTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTTGGATGGGAAACAGCTGCTaGAACCATCTTGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: FSFRECRNFGHRNLCLFWMGNSC*NHLGVE
Trigger: CTCTACACCAAGATGGTTCCAGCAGCTGTTTCCCAT...CCAAAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CCA 90 bp AGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTTGCCAGAATTCTGAATaGGAAACAGCTGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: RFSFRECRNFGHRNLCLFCQNSE*ETAAGT
Trigger: GGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCA...AAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CCA 90 bp CTTCGGGTGAATCACTTTAATGCTGTTAACGGCAAGTCTGTAAAAGGTTCAGGATGCCAGAATTCTGAATaGGAAACAGCTGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: LRVNHFNAVNGKSVKGSGCQNSE*ETAAGT
Trigger: GGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCA...TCCTGAACCTTTTACAGACTTGCCGTTAACAGCATTAAAGTGATTCACCCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455895.7
3UTR CAA 72 bp GATAAAAATGACCAAGAGCAACTGAAGCCATTCTTGTaGCAACTTCCTTTCCAAAGGAAAGCAGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: DKNDQEQLKPFL*QLPFQRKAEAL
Trigger: CAGTGCCTCTGCTTTCCTTTGGAAAGGAAGTTGCAACAAGAATGGCTTCAGTTGCTCTTGGTCATTTTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR CAA 90 bp GAGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTCCTGCCCAGCCAGCTTCTCCTaGACCACGCTGGCCGTGGCT +
Preference number: 5 (lower is better)
Translates to: EMLCSARCFRASLRACSCPASFS*TTLAVA
Trigger: AGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTGG...GCAGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CAA 90 bp AGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTCCTGCTCCAGCCAGCTTCTCCTaGACCACGCTGGCCGTGGCT +
Preference number: 5 (lower is better)
Translates to: RCSVPPAASGRPSGPAPAPASFS*TTLAVA
Trigger: AGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTGG...AGCAGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS GCA 90 bp AGACTTAGCGCCCGCAAAAGTTGGGCGGGGCTGGTTGGACCAGGTTaGATTGAGGCGGCGCAGGGCCCTGCTGAGGGAAGAAGGGCACGG +
Preference number: 5 (lower is better)
Translates to: RLSARKSWAGLVGPG*IEAAQGPAEGRRAR
Trigger: CCGTGCCCTTCTTCCCTCAGCAGGGCCCTGCGCCGCCTCAATGCAACCTGGTCCAACCAGCCCCGCCCAACTTTTGCGGGCGCTAAGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531222.1
CDS CCA 90 bp GCTCCGCCACCATCCCACGTCCTCCCTGTGGAAGACAGACACATCTaGCAGCACCGCGGTGCGATTCCTGCCCGCCCAAGGATCCGGTTT +
Preference number: 5 (lower is better)
Translates to: APPPSHVLPVEDRHI*QHRGAIPARPRIRF
Trigger: AAACCGGATCCTTGGGCGGGCAGGAATCGCACCGCGGTGCTGCCAGATGTGTCTGTCTTCCACAGGGAGGACGTGGGATGGTGGCGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474414.5
ENST00000530753.1
ENST00000530876.5
CDS CCA 90 bp AGGCCCAGGTCAGCCTCATCCTTGAGACTTAGCGCCCGCAAAAGTTaGGCGGGGCTGGTTGGACCAGGTTGCATTGAGGCGGCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: RPRSASSLRLSARKS*AGLVGPGCIEAAQG
Trigger: GCCCTGCGCCGCCTCAATGCAACCTGGTCCAACCAGCCCCGCCCAACTTTTGCGGGCGCTAAGTCTCAAGGATGAGGCTGACCTGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531222.1
CDS-3UTR CAA 90 bp GAGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTCCTGCTTTTGGGACAGGTCCTaGGGTAGCACTCGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: EMLCSARCFRASLRACSCFWDRS*GSTRAS
Trigger: TGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAAA...GCAGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS TCA 90 bp GCCCTGCTGAGGGAAGAAGGGCACGGGCCCGGCTTACCTTCTCTTTaGCTGCTTGGTAGCTCTGCTGCAGCCAGCTCCGCCACCATCCCA +
Preference number: 5 (lower is better)
Translates to: ALLREEGHGPGLPSL*LLGSSAAASSATIP
Trigger: TGGGATGGTGGCGGAGCTGGCTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAGGTAAGCCGGGCCCGTGCCCTTCTTCCCTCAGCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531222.1
CDS GCA 90 bp GCTTCGCAGACCGCTTGCCCACCCCCTCACAATGCGACTCCACTCTaGCCTTTCAGATCAGTCCACGCCCCCGCTGATCTCACGTTCCCC +
Preference number: 5 (lower is better)
Translates to: ASQTACPPPHNATPL*PFRSVHAPADLTFP
Trigger: GGGGAACGTGAGATCAGCGGGGGCGTGGACTGATCTGAAAGGGCAGAGTGGAGTCGCATTGTGAGGGGGTGGGCAAGCGGTCTGCGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000474414.5
ENST00000530753.1
ENST00000530876.5
CDS GCA 90 bp TCCCCGCTCAGATGTACCCTGCGGGCCGAGGCTTCGCAGACCGCTTaGCCACCCCCTCACAATGCGACTCCACTCTGCCCTTTCAGATCA +
Preference number: 5 (lower is better)
Translates to: SPLRCTLRAEASQTA*PPPHNATPLCPFRS
Trigger: TGATCTGAAAGGGCAGAGTGGAGTCGCATTGTGAGGGGGTGGGCAAGCGGTCTGCGAAGCCTCGGCCCGCAGGGTACATCTGAGCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474414.5
ENST00000530753.1
ENST00000530876.5
CDS-3UTR CAA 90 bp GGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGGGTGCAGTGGCCGGGTaGGCGATCTGTGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: GSHQNLCPELWLAEEIWGGAVAG*AICVTR
Trigger: CCTCGTGACACAGATCGCCAACCCGGCCACTGCACC...CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp TCTTCAGAGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTTGGCCAGGCTGGTCTaGAACTCCTCGCCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: SSEMLCSARCFRASLRACLARLV*NSSPQA
Trigger: TGCTTGAGGCGAGGAGTTCAAGACCAGCCTGGCCAA...GCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCTCTGAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS GCA 90 bp GGAGCCTTCCGTAGCCAGCTTCTCCTTGACCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTCATGCTGCACCACCTGGGTAAACTC +
Preference number: 5 (lower is better)
Translates to: GAFRSQLLLDHAGRG*DGTGRVMLHHLGKL
Trigger: GAGTTTACCCAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTACGGAAGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000444377.5
ENST00000455895.7
ENST00000530876.5
CDS GCA 90 bp CCCTGTGGAAGACAGACACATCTGGCAGCACCGCGGTGCGATTCCTaGCCGCCCAAGGATCCGGTTTGTTCCCCGCTCAGATGTACCCTG +
Preference number: 5 (lower is better)
Translates to: PCGRQTHLAAPRCDS*PPKDPVCSPLRCTL
Trigger: CAGGGTACATCTGAGCGGGGAACAAACCGGATCCTTGGGCGGGCAGGAATCGCACCGCGGTGCTGCCAGATGTGTCTGTCTTCCACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474414.5
ENST00000530753.1
ENST00000530876.5
CDS CCA 90 bp GCCCAGGACAGGACAGGTTGCGAGGGGCAGTTACTTGGGAGGGTTTaGGTGGTACTCACAGCCAGCTTCTCCTTGACCACGCTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: AQDRTGCEGQLLGRV*VVLTASFSLTTLAV
Trigger: CACGGCCAGCGTGGTCAAGGAGAAGCTGGCTGTGAGTACCACCCAAACCCTCCCAAGTAACTGCCCCTCGCAACCTGTCCTGTCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533084.1
CDS-3UTR CAA 90 bp CAGGGCTGGGCTGAGACGAGCGAGGGAGGCGAGAGATGCCATGGGTGGGGGAGCTGGCCACAGGAACCTTaGCCTCTTTTGGAGATATGG +
Preference number: 5 (lower is better)
Translates to: QGWAETSEGGERCHGWGSWPQEP*PLLEIW
Trigger: CCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCA...GCTCCCCCACCCATGGCATCTCTCGCCTCCCTCGCTCGTCTCAGCCCAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp CAGAGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTCCTGCTAAGGTCAAGAACTaGACCCTCTATCCACCCTGG +
Preference number: 5 (lower is better)
Translates to: QRCSVPPAASGRPSGPAPAKVKN*TLYPPW
Trigger: CCAGGGTGGATAGAGGGTCAAGTTCTTGACCTTAGC...AGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS GCA 90 bp ATAGAGGCGAGCAGCCAGCTTCTCCTTGACCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTCATGCTGCACCACCTGGGTAAACTC +
Preference number: 5 (lower is better)
Translates to: IEASSQLLLDHAGRG*DGTGRVMLHHLGKL
Trigger: GAGTTTACCCAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTGCTCGCCTCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419121.6
CDS GCA 90 bp GGTGGTACTCACAGCCAGCTTCTCCTTGACCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTCATGCTGCACCACCTGGGTAAACTC +
Preference number: 5 (lower is better)
Translates to: GGTHSQLLLDHAGRG*DGTGRVMLHHLGKL
Trigger: GAGTTTACCCAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTGTGAGTACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533084.1
CDS-3UTR CAA 90 bp CAGGGCTGGGCTGAGACGAGCGAGGGAGGCGAGAGATGCCATGGGTGGGGGAGCGGGAATGTAGAAATTTaGGCCACAGGAACCTTTGCC +
Preference number: 5 (lower is better)
Translates to: QGWAETSEGGERCHGWGSGNVEI*ATGTFA
Trigger: GGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCC...GCTCCCCCACCCATGGCATCTCTCGCCTCCCTCGCTCGTCTCAGCCCAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp ACAGGGGAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACGGTGCAGTGGCCGGGTaGGCGATCTGTGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: TGELRWVAGWTRYPARQHGAVAG*AICVTR
Trigger: CCTCGTGACACAGATCGCCAACCCGGCCACTGCACC...GTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTCCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS TCA 90 bp TTCCGCCATCTTGCCTGCATGACATCACCACTATTTACTGACCTTTaGCTTCCGACACGGCACCGCCCCCTCAAGGACCGCCCCCGAGGC +
Preference number: 5 (lower is better)
Translates to: FRHLACMTSPLFTDL*LPTRHRPLKDRPRG
Trigger: GCCTCGGGGGCGGTCCTTGAGGGGGCGGTGCCGTGTCGGAAGTCAAAGGTCAGTAAATAGTGGTGATGTCATGCAGGCAAGATGGCGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474414.5
CDS GCA 90 bp TTGACCACGCTGGCCGTGGCTGCGATGGTACAGGCCGTGTCATGCTaGACCACCTGGGTAAACTCCGTCAGGTCCCGCTTCATAAACTCC +
Preference number: 5 (lower is better)
Translates to: LTTLAVAAMVQAVSC*TTWVNSVRSRFINS
Trigger: GGAGTTTATGAAGCGGGACCTGACGGAGTTTACCCAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000341071.11
ENST00000373520.8
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000474414.5
ENST00000527513.5
ENST00000530753.1
ENST00000530876.5
ENST00000533084.1
CDS GCA 90 bp TCCTTGACCACGCTGGCCGTGGCTGCGATGGTACAGGCCGTGTCATaGTGCACCACCTGGGTAAACTCCGTCAGGTCCCGCTTCATAAAC +
Preference number: 5 (lower is better)
Translates to: SLTTLAVAAMVQAVS*CTTWVNSVRSRFIN
Trigger: GTTTATGAAGCGGGACCTGACGGAGTTTACCCAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000341071.11
ENST00000373520.8
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000474414.5
ENST00000527513.5
ENST00000530753.1
ENST00000530876.5
ENST00000533084.1
CDS GCA 90 bp ACAGGCTGCAATAGCCAGCTTCTCCTTGACCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTCATGCTGCACCACCTGGGTAAACTC +
Preference number: 5 (lower is better)
Translates to: TGCNSQLLLDHAGRG*DGTGRVMLHHLGKL
Trigger: GAGTTTACCCAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTATTGCAGCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000446293.6
ENST00000530753.1
CDS-3UTR CAA 90 bp TTCCTCCTCCTCCCAGCCGGGCTCTTCAGAGATGCTCTGTTCCGCCCGCTGCTTGTTCATTACAGTAGGTaGCTGGGTCCGACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: FLLLPAGLFRDALFRPLLVHYSR*LGPTAG
Trigger: GCCTGCAGTCGGACCCAGCAACCTACTGTAATGAAC...AAGCAGCGGGCGGAACAGAGCATCTCTGAAGAGCCCGGCTGGGAGGAGGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CAA 90 bp GCAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGTGCCCAGAGCTCTGGTaGGCAGAGGAGATTTGGGGG +
Preference number: 5 (lower is better)
Translates to: AGSHQNLCPELWLAEEIWCPELW*AEEIWG
Trigger: CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCA...CCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCACAATGCCCAGAGCTCTGGTaGGCAGAGGAGATTTGGGGG +
Preference number: 5 (lower is better)
Translates to: APHSPRGAALPEWRVRAQCPELW*AEEIWG
Trigger: CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCA...TTGTGCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp CAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGTAGCCAGCTTCTCCTaGACCACGCTGGCCGTGGCT +
Preference number: 5 (lower is better)
Translates to: QRRFGGTFSVFQGWAETSVASFS*TTLAVA
Trigger: AGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTAC...GCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444377.5
ENST00000455895.7
CDS TCA 90 bp CTCACCCTTCCGCCATCTTGCCTGCATGACATCACCACTATTTACTaGCCTTTGACTTCCGACACGGCACCGCCCCCTCAAGGACCGCCC +
Preference number: 5 (lower is better)
Translates to: LTLPPSCLHDITTIY*PLTSDTAPPPQGPP
Trigger: GGGCGGTCCTTGAGGGGGCGGTGCCGTGTCGGAAGTCAAAGGTCAGTAAATAGTGGTGATGTCATGCAGGCAAGATGGCGGAAGGGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474414.5
CDS TCA 90 bp AGTTACTTGGGAGGGTTTGGGTGGTACTCACAGCCAGCTTCTCCTTaGCCACGCTGGCCGTGGCTGCGATGGTACAGGCCGTGTCATGCT +
Preference number: 5 (lower is better)
Translates to: SYLGGFGWYSQPASP*PRWPWLRWYRPCHA
Trigger: AGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTGTGAGTACCACCCAAACCCTCCCAAGTAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533084.1
CDS GCA 90 bp CGATGGTTTTGTAGCCAGCTTCTCCTTGACCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTCATGCTGCACCACCTGGGTAAACTC +
Preference number: 5 (lower is better)
Translates to: RWFCSQLLLDHAGRG*DGTGRVMLHHLGKL
Trigger: GAGTTTACCCAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTACAAAACCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474414.5
CDS CCA 90 bp CTGGCCGTGGCTGCGATGGTACAGGCCGTGTCATGCTGCACCACCTaGGTAAACTCCGTCAGGTCCCGCTTCATAAACTCCAAGGCTTCA +
Preference number: 5 (lower is better)
Translates to: LAVAAMVQAVSCCTT*VNSVRSRFINSKAS
Trigger: TGAAGCCTTGGAGTTTATGAAGCGGGACCTGACGGAGTTTACCCAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000341071.11
ENST00000373520.8
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000474414.5
ENST00000527513.5
ENST00000530753.1
ENST00000530876.5
ENST00000533084.1
CDS-3UTR CAA 90 bp TGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGATAGCCAGCTTCTCCTaGACCACGCTGGCCGTGGCT +
Preference number: 5 (lower is better)
Translates to: WQRRFGGTFSVFQGWAETIASFS*TTLAVA
Trigger: AGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTAT...CGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341071.11
ENST00000446293.6
CDS-3UTR CAA 90 bp CTTCAGAGATGCTCTGTTCCGCCCGCTGCTTCAGGGCGTCCCTCCGGGCCTGCTGGGAATGTAGAAATTTaGGCCACAGGAACCTTTGCC +
Preference number: 5 (lower is better)
Translates to: LQRCSVPPAASGRPSGPAGNVEI*ATGTFA
Trigger: GGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCC...AGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCTCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CAA 90 bp TTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGGGTGCAGTGGCCGGGTaGGCGATCTGTGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: FLSLGSSYCWHKSEFLAGGAVAG*AICVTR
Trigger: CCTCGTGACACAGATCGCCAACCCGGCCACTGCACC...CCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp TGCAGCCCCTCATTCCCCCAGAGGTGCAGCTTTACCAGAGTGGAGGGTGAGAGCTTTTGGGACAGGTCCTaGGGTAGCACTCGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: CSPSFPQRCSFTRVEGESFWDRS*GSTRAS
Trigger: TGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAAA...GCTCTCACCCTCCACTCTGGTAAAGCTGCACCTCTGGGGGAATGAGGGGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp TGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGTGCCCAGAGCTCTGGTaGGCAGAGGAGATTTGGGGG +
Preference number: 5 (lower is better)
Translates to: WQRRFGGTFSVFQGWAETCPELW*AEEIWG
Trigger: CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCA...CGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp TTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGGCAGCCAGCTTCTCCTaGACCACGCTGGCCGTGGCT +
Preference number: 5 (lower is better)
Translates to: FLSLGSSYCWHKSEFLAGAASFS*TTLAVA
Trigger: AGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTGC...CCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419121.6
CDS GCA 90 bp GGCGTCAAACAATTCCGGGGGCCCATCTGGTTCATTACAGTAGGTTaGTGGGTCCGACTGCAGGCTATAGAGGCGAGCAGCCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: GVKQFRGPIWFITVG*WVRLQAIEASSQLL
Trigger: GAGAAGCTGGCTGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAATTGTTTGACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419121.6
CDS-3UTR CAA 90 bp CAGGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGTCGCAGTCGATGGTTTaGTCTGGCGAAGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: QGATRICAQSSGWQRRFGSQSMV*SGEGAK
Trigger: CTTTGCCCCTTCGCCAGACAAAACCATCGACTGCGA...CCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR CAA 90 bp TCCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGGTGCAGTGGCCGGGTaGGCGATCTGTGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: SSGTVGVQQKNTGSSGEEGAVAG*AICVTR
Trigger: CCTCGTGACACAGATCGCCAACCCGGCCACTGCACC...CTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCGGTGCAGTGGCCGGGTaGGCGATCTGTGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: GEEDRFPLPWVILLLAQVGAVAG*AICVTR
Trigger: CCTCGTGACACAGATCGCCAACCCGGCCACTGCACC...GACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp TCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGGCTAAGGTCAAGAACTaGACCCTCTATCCACCCTGG +
Preference number: 5 (lower is better)
Translates to: SWGGEETQERTPAGGTAGAKVKN*TLYPPW
Trigger: CCAGGGTGGATAGAGGGTCAAGTTCTTGACCTTAGC...CCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CAA 90 bp TTCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGAGCTGGGCTAAGGACTaGGGTGCATCCGACATGAAG +
Preference number: 5 (lower is better)
Translates to: FLGRGRNARANSCRWHSWSWAKD*GASDMK
Trigger: CTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCT...CCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS CCA 90 bp ACAAGGAGCTCTGAGATCTCCCCCTTCTTCTCCTCCAAGCAGAACTaGGAAAGCCAGGCGTCAAACAATTCCGGGGGCCAGCCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: TRSSEISPFFSSKQN*ESQASNNSGGQPAS
Trigger: AGAAGCTGGCTGGCCCCCGGAATTGTTTGACGCCTGGCTTTCCCAGTTCTGCTTGGAGGAGAAGAAGGGGGAGATCTCAGAGCTCCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527513.5
CDS-3UTR CAA 90 bp GGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGCTAAGGACTCTTCTCTTTGACTGCTaGGTAGCTCTGCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GEETQERTPAGGTAGLRTLLFDC*VALLQP
Trigger: TGGCTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAG...AGTCCTTAGCCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp GGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGACTTCTCTTTGACTGCTaGGTAGCTCTGCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GATRICAQSSGWQRRFGGLLFDC*VALLQP
Trigger: TGGCTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAG...TCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGATCGCAGTCGATGGTTTaGTCTGGCGAAGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: GRGDLGEHSQSSRAGLRRSQSMV*SGEGAK
Trigger: CTTTGCCCCTTCGCCAGACAAAACCATCGACTGCGA...TCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR CAA 90 bp AGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGGTTCATTACAGTAGGTaGCTGGGTCCGACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: RGDLGEHSQSSRAGLRRAVHYSR*LGPTAG
Trigger: GCCTGCAGTCGGACCCAGCAACCTACTGTAATGAAC...CGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GCTAAGGACTTGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGCATGGGGACAGTTCATTACAGTAGGTaGCTGGGTCCGACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: AKDLGASDMKKPWEGMGTVHYSR*LGPTAG
Trigger: GCCTGCAGTCGGACCCAGCAACCTACTGTAATGAAC...TGTCCCCATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp GGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGTTCATTACAGTAGGTaGCTGGGTCCGACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: GRGDLGEHSQSSRAGLRRVHYSR*LGPTAG
Trigger: GCCTGCAGTCGGACCCAGCAACCTACTGTAATGAAC...TCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp TCTTCCTCCTCCTCCCAGCCGGGCTCTTCAGAGATGCTCTGTTCCGCCCGCTGCGAACCTTTGCCTCTTTaGGAGATATGGGTGAAATGC +
Preference number: 5 (lower is better)
Translates to: SSSSSQPGSSEMLCSARCEPLPL*EIWVKC
Trigger: GCATTTCACCCATATCTCCAAAAGAGGCAAAGGTTC...GCAGCGGGCGGAACAGAGCATCTCTGAAGAGCCCGGCTGGGAGGAGGAGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CAA 90 bp GGGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGTGGCCACAGGAACCTTaGCCTCTTTTGGAGATATGG +
Preference number: 5 (lower is better)
Translates to: GSHQNLCPELWLAEEIWGWPQEP*PLLEIW
Trigger: CCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCA...CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp TTCCAGCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTGCACCTCCTCTTCTTTTGGGACAGGTCCTaGGGTAGCACTCGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: FQLPGGIHFGKCHLHLLFFWDRS*GSTRAS
Trigger: TGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAAA...GAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444377.5
CDS-3UTR CAA 90 bp CTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGTTTTGGGACAGGTCCTaGGGTAGCACTCGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: LVGRGDLGEHSQSSRAGLFWDRS*GSTRAS
Trigger: TGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAAA...CAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTTGCCCAGAGCTCTGGTaGGCAGAGGAGATTTGGGGG +
Preference number: 5 (lower is better)
Translates to: RALVGRGDLGEHSQSSRACPELW*AEEIWG
Trigger: CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCA...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp ACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTGCCCAGAGCTCTGGTaGGCAGAGGAGATTTGGGGG +
Preference number: 5 (lower is better)
Translates to: TRICAQSSGWQRRFGGTFCPELW*AEEIWG
Trigger: CCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCA...GAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp AAATGTGTTCACTGTCCCTGTTTAGCCAAGGGTAGGTGGCATGGCCCTCCCTGCGAGGTGGGTAGCTGGTaGGACAAGGTATCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: KCVHCPCLAKGRWHGPPCEVGSW*DKVSCQ
Trigger: CTGGCAGGATACCTTGTCCAACCAGCTACCCACCTC...GCAGGGAGGGCCATGCCACCTACCCTTGGCTAAACAGGGACAGTGAACACATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp GGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGCTAAGGACTTGTAAGTACTCGGCTTaGATCACCGCTCTGTACCGC +
Preference number: 5 (lower is better)
Translates to: GEETQERTPAGGTAGLRTCKYSA*ITALYR
Trigger: GCGGTACAGAGCGGTGATCAAAGCCGAGTACTTACA...AGTCCTTAGCCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp GCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGGTAGCCAGCTTCTCCTaGACCACGCTGGCCGTGGCT +
Preference number: 5 (lower is better)
Translates to: ALLVRRIGFLSLGSSYCWVASFS*TTLAVA
Trigger: AGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTAC...CCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444377.5
ENST00000455895.7
CDS GCA 90 bp GGCGTCAAACAATTCCGGGGGCCCATCTGGTTCATTACAGTAGGTTaGTGGGTCCGACTGCAGGCTATAGAGGCGAGCCTTCTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: GVKQFRGPIWFITVG*WVRLQAIEASLLFD
Trigger: GTCAAAGAGAAGGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAATTGTTTGACGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526031.5
CDS CCA 90 bp GTCAAACAATTCCGGGGGCCCATCTGGTTCATTACAGTAGGTTGCTaGGTCCGACTGCAGGCTATAGAGGCGAGCAGCCAGCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: VKQFRGPIWFITVGC*VRLQAIEASSQLLL
Trigger: AAGGAGAAGCTGGCTGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAATTGTTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419121.6
CDS-3UTR CAA 90 bp GGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGACTTCTCTTTGACTGCTaGGTAGCTCTGCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GRGDLGEHSQSSRAGLRRLLFDC*VALLQP
Trigger: TGGCTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAG...TCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp TCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGTTCATTACAGTAGGTaGCTGGGTCCGACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: SGWQRRFGGTFSVFQGWAVHYSR*LGPTAG
Trigger: GCCTGCAGTCGGACCCAGCAACCTACTGTAATGAAC...AGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GAATGGAGGCCACTGCCTGAGTGGCACTGTGGCCAAAAGCAGAGGTGGCAGTGGCTCAGGTTAAGTAACTaGCCCTTGCCCTTGATCACA +
Preference number: 5 (lower is better)
Translates to: EWRPLPEWHCGQKQRWQWLRLSN*PLPLIT
Trigger: TGTGATCAAGGGCAAGGGCAAGTTACTTAACCTGAG...CCACTGCCACCTCTGCTTTTGGCCACAGTGCCACTCAGGCAGTGGCCTCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CAA 90 bp TCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGTCCTTTAAGGAGAACTaGCCTCCTGCTGAGCAGATA +
Preference number: 5 (lower is better)
Translates to: SWGGEETQERTPAGGTAGSFKEN*PPAEQI
Trigger: TATCTGCTCAGCAGGAGGCAAGTTCTCCTTAAAGGA...CCCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CAA 90 bp ATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCAGACCTAACCTCCACTaGCTGAGCAGAGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: ICAQSSGWQRRFGGTFSVRPNLH*LSRATS
Trigger: GGAGGTGGCTCTGCTCAGCAAGTGGAGGTTAGGTCT...GACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CAA 90 bp GAATGGAGGCCACTGCCTGAGTGGCACTGTGGCCAAAAGCAGAGGTGGCAGTGGTATGGACAGAGTATGTaGTCTCAGCTTCCTCCGAGA +
Preference number: 5 (lower is better)
Translates to: EWRPLPEWHCGQKQRWQWYGQSM*SQLPPR
Trigger: TCTCGGAGGAAGCTGAGACAACATACTCTGTCCATA...CCACTGCCACCTCTGCTTTTGGCCACAGTGCCACTCAGGCAGTGGCCTCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CAA 90 bp AAATGTGTTCACTGTCCCTGTTTAGCCAAGGGTAGGTGGCATGGCCCTCCCTGCAGCTGGGCTAAGGACTaGGGTGCATCCGACATGAAG +
Preference number: 5 (lower is better)
Translates to: KCVHCPCLAKGRWHGPPCSWAKD*GASDMK
Trigger: CTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCT...GCAGGGAGGGCCATGCCACCTACCCTTGGCTAAACAGGGACAGTGAACACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp CAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCCCGCTGGTAGCTGTTTaGTGTCCTAAACTACAGGGG +
Preference number: 5 (lower is better)
Translates to: QRRFGGTFSVFQGWAETSPLVAV*CPKLQG
Trigger: CCCCTGTAGTTTAGGACACAAAACAGCTACCAGCGG...GCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS TCA 90 bp ACTCTATCCAGTCTCTGTCCCGAGTTCGCCCTCAAACTCCGCCCCTaGACTCTCAGTTCAATCGTCATTCAGTCCTGTCCTCAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: TLSSLCPEFALKLRP*TLSSIVIQSCPQAP
Trigger: TGGAGCCTGAGGACAGGACTGAATGACGATTGAACTGAGAGTTCAGGGGCGGAGTTTGAGGGCGAACTCGGGACAGAGACTGGATAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474414.5
CDS CCA 90 bp GTCAAACAATTCCGGGGGCCCATCTGGTTCATTACAGTAGGTTGCTaGGTCCGACTGCAGGCTATAGAGGCGAGCCTTCTCTTTGACTGC +
Preference number: 5 (lower is better)
Translates to: VKQFRGPIWFITVGC*VRLQAIEASLLFDC
Trigger: GCAGTCAAAGAGAAGGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAATTGTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526031.5
CDS-3UTR CAA 90 bp GTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCATAGCCAGCTTCTCCTaGACCACGCTGGCCGTGGCT +
Preference number: 5 (lower is better)
Translates to: VFSRKTQALLVRRIGFLSIASFS*TTLAVA
Trigger: AGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTAT...GGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CAA 90 bp TGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCTCGCAGTCGATGGTTTaGTCTGGCGAAGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: CAQSSGWQRRFGGTFSVFSQSMV*SGEGAK
Trigger: CTTTGCCCCTTCGCCAGACAAAACCATCGACTGCGA...GAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR CAA 90 bp AGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGTGGCCACAGGAACCTTaGCCTCTTTTGGAGATATGG +
Preference number: 5 (lower is better)
Translates to: RRFGGTFSVFQGWAETSEWPQEP*PLLEIW
Trigger: CCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCA...CTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGGGGGAATGTAGAAATTTaGGCCACAGGAACCTTTGCC +
Preference number: 5 (lower is better)
Translates to: GDLGEHSQSSRAGLRRARGNVEI*ATGTFA
Trigger: GGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCC...CCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp TTCTTGGGGAGGGGAAGAAACGCAAGAGCGAACTCCTGCAGGTGGCACAGCTGGGGGAATGTAGAAATTTaGGCCACAGGAACCTTTGCC +
Preference number: 5 (lower is better)
Translates to: FLGRGRNARANSCRWHSWGNVEI*ATGTFA
Trigger: GGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCC...CCAGCTGTGCCACCTGCAGGAGTTCGCTCTTGCGTTTCTTCCCCTCCCCAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp ATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTTTGGGACAGGTCCTaGGGTAGCACTCGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: ICAQSSGWQRRFGGTFSVFWDRS*GSTRAS
Trigger: TGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAAA...GACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp CTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTTTTTGGGACAGGTCCTaGGGTAGCACTCGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: LCPELWLAEEIWGNILSLFWDRS*GSTRAS
Trigger: TGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAAA...AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GGAGCCACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAGAGCCTTTCTTTCCATaGTTGGAGGGTGTAGACTTC +
Preference number: 5 (lower is better)
Translates to: GATRICAQSSGWQRRFGGEPFFP*LEGVDF
Trigger: GAAGTCTACACCCTCCAACAATGGAAAGAAAGGCTC...TCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAGGGAGCCTTTCTTTCCATaGTTGGAGGGTGTAGACTTC +
Preference number: 5 (lower is better)
Translates to: GDLGEHSQSSRAGLRRAREPFFP*LEGVDF
Trigger: GAAGTCTACACCCTCCAACAATGGAAAGAAAGGCTC...CCTCGCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp CTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACTTGGCCAGGCTGGTCTaGAACTCCTCGCCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: LLVRRIGFLSLGSSYCWHLARLV*NSSPQA
Trigger: TGCTTGAGGCGAGGAGTTCAAGACCAGCCTGGCCAA...GTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CAA 90 bp CATGGCCCTCCCTGCCTGCTTATGTATGGACAGAGTATGTTGTCTCAGCTTCCTGAGGTGGGTAGCTGGTaGGACAAGGTATCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: HGPPCLLMYGQSMLSQLPEVGSW*DKVSCQ
Trigger: CTGGCAGGATACCTTGTCCAACCAGCTACCCACCTC...AGGAAGCTGAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp CTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTGAGGTGGGTAGCTGGTaGGACAAGGTATCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LSLGSSYCWHKSEFLAGIEVGSW*DKVSCQ
Trigger: CTGGCAGGATACCTTGTCCAACCAGCTACCCACCTC...AATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp TCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTTGTAAGTACTCGGCTTaGATCACCGCTCTGTACCGC +
Preference number: 5 (lower is better)
Translates to: SGWQRRFGGTFSVFQGWACKYSA*ITALYR
Trigger: GCGGTACAGAGCGGTGATCAAAGCCGAGTACTTACA...AGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp TCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTTCCAGTGAGAGGCCTGTaGCGAGCCCTGACCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SPLGHPIVGTSQSFWPGFPVRGL*RALTLS
Trigger: AGAAAGGGTCAGGGCTCGCAACAGGCCTCTCACTGG...AAATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS TCA 90 bp TCAGTTCAATCGTCATTCAGTCCTGTCCTCAGGCTCCACCAAGCTTaGCTCTTTGTCACTGTCCGCAAACGTCGGGTACGGTGGCCTCTA +
Preference number: 5 (lower is better)
Translates to: SVQSSFSPVLRLHQA*LFVTVRKRRVRWPL
Trigger: TAGAGGCCACCGTACCCGACGTTTGCGGACAGTGACAAAGAGTCAAGCTTGGTGGAGCCTGAGGACAGGACTGAATGACGATTGAACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474414.5
CDS-3UTR CAA 90 bp GAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACACAGAATCTTCATCTTCTCTGTaGCTCCTGAGGAGCCTTCCG +
Preference number: 5 (lower is better)
Translates to: ELRWVAGWTRYPARQHTESSSSL*LLRSLP
Trigger: CGGAAGGCTCCTCAGGAGCAACAGAGAAGATGAAGA...TTCTGTGTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp TGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCTCTTCATCTTCTCTGTaGCTCCTGAGGAGCCTTCCG +
Preference number: 5 (lower is better)
Translates to: CAQSSGWQRRFGGTFSVFSSSSL*LLRSLP
Trigger: CGGAAGGCTCCTCAGGAGCAACAGAGAAGATGAAGA...GAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
CDS-3UTR CAA 90 bp TCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGAGTTCATTACAGTAGGTaGCTGGGTCCGACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: SQLPPRETGGLASVYTGRVHYSR*LGPTAG
Trigger: GCCTGCAGTCGGACCCAGCAACCTACTGTAATGAAC...TCTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp TGGCGATCTGTGTCACGAGGGAGATGCTCTCACTGCTCTCTGATGGAGTCACCTTGGCCACAGGAACCTTaGCCTCTTTTGGAGATATGG +
Preference number: 5 (lower is better)
Translates to: WRSVSRGRCSHCSLMESPWPQEP*PLLEIW
Trigger: CCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCA...AGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGACACAGATCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CAA 90 bp GGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGGGAATGTAGAAATTTaGGCCACAGGAACCTTTGCC +
Preference number: 5 (lower is better)
Translates to: GRGDLGEHSQSSRAGLRRGNVEI*ATGTFA
Trigger: GGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCC...TCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp CAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCTTTTGGGACAGGTCCTaGGGTAGCACTCGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: QKNTGSSGEEDRFPLPWVFWDRS*GSTRAS
Trigger: TGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAAA...GACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GTAGGTGGCATGGCCCTCCCTGCCTGCTTATGTATGGACAGAGTATGTTGTCTCTTAGCTGGGAGAGCTTaGGACTGTTCCAGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: VGGMALPACLCMDRVCCLLAGRA*DCSSLS
Trigger: TGAGAGGCTGGAACAGTCCAAAGCTCTCCCAGCTAA...GAGACAACATACTCTGTCCATACATAAGCAGGCAGGGAGGGCCATGCCACCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CAA 90 bp TGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGGAACGTTTTCTTGCTTaGTTCCTACTCTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: WQRRFGGTFSVFQGWAETERFLA*FLLLAC
Trigger: GCAGGCCAAGAGTAGGAACAAAGCAAGAAAACGTTC...CGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CAA 90 bp CAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCCCTTGGGTCATCCTATaGTTGGCACAAGTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: QRRFGGTFSVFQGWAETSPWVIL*LAQVRV
Trigger: AACTCTGACTTGTGCCAACAATAGGATGACCCAAGG...GCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp TTCCAGCTCCCCGGAGGCATCCACTTTGGAAAGTGCCATCTGCACCTCCTCTTCCCTTGGGTCATCCTATaGTTGGCACAAGTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: FQLPGGIHFGKCHLHLLFPWVIL*LAQVRV
Trigger: AACTCTGACTTGTGCCAACAATAGGATGACCCAAGG...GAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444377.5
CDS-3UTR CAA 90 bp GCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCCTTGGGTCATCCTATaGTTGGCACAAGTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: ALVGRGDLGEHSQSSRAGPWVIL*LAQVRV
Trigger: AACTCTGACTTGTGCCAACAATAGGATGACCCAAGG...CCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp ACAGGGGAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACTATGGACAGAGTATGTaGTCTCAGCTTCCTCCGAGA +
Preference number: 5 (lower is better)
Translates to: TGELRWVAGWTRYPARQHYGQSM*SQLPPR
Trigger: TCTCGGAGGAAGCTGAGACAACATACTCTGTCCATA...GTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTCCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp GCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGAGCTGGGCTAAGGACTaGGGTGCATCCGACATGAAG +
Preference number: 5 (lower is better)
Translates to: ALLVRRIGFLSLGSSYCWSWAKD*GASDMK
Trigger: CTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCT...CCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp CACCAGAATCTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTTGTAAGTACTCGGCTTaGATCACCGCTCTGTACCGC +
Preference number: 5 (lower is better)
Translates to: HQNLCPELWLAEEIWGNICKYSA*ITALYR
Trigger: GCGGTACAGAGCGGTGATCAAAGCCGAGTACTTACA...AATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAGATTCTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS TCA 90 bp CTAGGAGCAAAACGACAAGCTCACCCTTCCGCCATCTTGCCTGCATaGCATCACCACTATTTACTGACCTTTGACTTCCGACACGGCACC +
Preference number: 5 (lower is better)
Translates to: LGAKRQAHPSAILPA*HHHYLLTFDFRHGT
Trigger: GGTGCCGTGTCGGAAGTCAAAGGTCAGTAAATAGTGGTGATGTCATGCAGGCAAGATGGCGGAAGGGTGAGCTTGTCGTTTTGCTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474414.5
CDS-3UTR CAA 90 bp GGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGCTTCTCTTTGACTGCTaGGTAGCTCTGCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GSSGEEDRFPLPWVILLLLLFDC*VALLQP
Trigger: TGGCTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAG...CAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp ACAGGGGAGTTGAGGTGGGTAGCTGGTTGGACAAGGTATCCTGCCAGGCAACACGAACCTTTGCCTCTTTaGGAGATATGGGTGAAATGC +
Preference number: 5 (lower is better)
Translates to: TGELRWVAGWTRYPARQHEPLPL*EIWVKC
Trigger: GCATTTCACCCATATCTCCAAAAGAGGCAAAGGTTC...GTGTTGCCTGGCAGGATACCTTGTCCAACCAGCTACCCACCTCAACTCCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp CAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGACGAGCGAACCTTTGCCTCTTTaGGAGATATGGGTGAAATGC +
Preference number: 5 (lower is better)
Translates to: QRRFGGTFSVFQGWAETSEPLPL*EIWVKC
Trigger: GCATTTCACCCATATCTCCAAAAGAGGCAAAGGTTC...GCTCGTCTCAGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGGAACCTTTGCCTCTTTaGGAGATATGGGTGAAATGC +
Preference number: 5 (lower is better)
Translates to: ALVGRGDLGEHSQSSRAGEPLPL*EIWVKC
Trigger: GCATTTCACCCATATCTCCAAAAGAGGCAAAGGTTC...CCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp CCTCAGGAACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGTGGCCACAGGAACCTTaGCCTCTTTTGGAGATATGG +
Preference number: 5 (lower is better)
Translates to: PQEQWVFSRKTQALLVRRWPQEP*PLLEIW
Trigger: CCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCA...CCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGTTCCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp CTCTGGGGGCCAGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTGGCCACAGGAACCTTaGCCTCTTTTGGAGATATGG +
Preference number: 5 (lower is better)
Translates to: LWGPGSPSGNVEILATGTWPQEP*PLLEIW
Trigger: CCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCA...GGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCTGGCCCCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CAA 90 bp AGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGGGAATGTAGAAATTTaGGCCACAGGAACCTTTGCC +
Preference number: 5 (lower is better)
Translates to: SSGWQRRFGGTFSVFQGWGNVEI*ATGTFA
Trigger: GGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCC...CCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp TCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGGCTGAGCCTTTCTTTCCATaGTTGGAGGGTGTAGACTTC +
Preference number: 5 (lower is better)
Translates to: SGWQRRFGGTFSVFQGWAEPFFP*LEGVDF
Trigger: GAAGTCTACACCCTCCAACAATGGAAAGAAAGGCTC...AGCCCAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp TCTCAGCTTCCTCCGAGAGAGACTGGTGGTTTAGCTTCTGTCTACACAGGCAGACCGCTGGTAGCTGTTTaGTGTCCTAAACTACAGGGG +
Preference number: 5 (lower is better)
Translates to: SQLPPRETGGLASVYTGRPLVAV*CPKLQG
Trigger: CCCCTGTAGTTTAGGACACAAAACAGCTACCAGCGG...TCTGCCTGTGTAGACAGAAGCTAAACCACCAGTCTCTCTCGGAGGAAGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp GTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCTCTTCATCTTCTCTGTaGCTCCTGAGGAGCCTTCCG +
Preference number: 5 (lower is better)
Translates to: VFSRKTQALLVRRIGFLSSSSSL*LLRSLP
Trigger: CGGAAGGCTCCTCAGGAGCAACAGAGAAGATGAAGA...GGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp GAGCACAAAGGCTGGGTCTGTCTTCAGGAAGAAGAGCTTTTGCAGAAGCCTGATTCTTCATCTTCTCTGTaGCTCCTGAGGAGCCTTCCG +
Preference number: 5 (lower is better)
Translates to: EHKGWVCLQEEELLQKPDSSSSL*LLRSLP
Trigger: CGGAAGGCTCCTCAGGAGCAACAGAGAAGATGAAGA...ATCAGGCTTCTGCAAAAGCTCTTCTTCCTGAAGACAGACCCAGCCTTTGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp CCAGGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTCGCAGTCGATGGTTTaGTCTGGCGAAGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: PGSPSGNVEILATGTFASSQSMV*SGEGAK
Trigger: CTTTGCCCCTTCGCCAGACAAAACCATCGACTGCGA...AGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CAA 90 bp GAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCGCAGTCGATGGTTTaGTCTGGCGAAGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: EDRFPLPWVILLLAQVRVSQSMV*SGEGAK
Trigger: CTTTGCCCCTTCGCCAGACAAAACCATCGACTGCGA...AACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp ACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTGTTCATTACAGTAGGTaGCTGGGTCCGACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: TVGVQQKNTGSSGEEDRFVHYSR*LGPTAG
Trigger: GCCTGCAGTCGGACCCAGCAACCTACTGTAATGAAC...AAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGTGGCCACAGGAACCTTaGCCTCTTTTGGAGATATGG +
Preference number: 5 (lower is better)
Translates to: ALLVRRIGFLSLGSSYCWWPQEP*PLLEIW
Trigger: CCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCA...CCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GGTGTCCCTGACCCACGATCCCTTTCACTCATTGGTGAGCACACCAGATTAGGTGGGAATGTAGAAATTTaGGCCACAGGAACCTTTGCC +
Preference number: 5 (lower is better)
Translates to: GVPDPRSLSLIGEHTRLGGNVEI*ATGTFA
Trigger: GGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCC...ACCTAATCTGGTGTGCTCACCAATGAGTGAAAGGGATCGTGGGTCAGGGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp CCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATTTAAGTAACTTGCCCTaGCCCTTGATCACACTGGTC +
Preference number: 5 (lower is better)
Translates to: PLPWVILLLAQVRVSGRDLSNLP*PLITLV
Trigger: GACCAGTGTGATCAAGGGCAAGGGCAAGTTACTTAA...ATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CAA 90 bp CTGTGCCCAGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCTTGGGTCATCCTATaGTTGGCACAAGTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LCPELWLAEEIWGNILSLPWVIL*LAQVRV
Trigger: AACTCTGACTTGTGCCAACAATAGGATGACCCAAGG...AAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCTGGGCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp TTCCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGCCTTGGGTCATCCTATaGTTGGCACAAGTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: FLSLGSSYCWHKSEFLAGPWVIL*LAQVRV
Trigger: AACTCTGACTTGTGCCAACAATAGGATGACCCAAGG...CCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGGTCTCTTTCTTTCCATaGTTGGAGGGTGTAGACTTC +
Preference number: 5 (lower is better)
Translates to: ELWLAEEIWGNILSLPGLVSFFP*LEGVDF
Trigger: GAAGTCTACACCCTCCAACAATGGAAAGAAAGAGAC...CAGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444377.5
CDS TCA 90 bp CCTCTTCAGTCATGTCCAAGTCAAAGTCTTTCTCCCAGTCCTCACTaGTGTCCGTGCTTGAGCCTCGGAAAAGGCAGGTTACTAAAGAGC +
Preference number: 5 (lower is better)
Translates to: PLQSCPSQSLSPSPH*CPCLSLGKGRLLKS
Trigger: GCTCTTTAGTAACCTGCCTTTTCCGAGGCTCAAGCACGGACATCAGTGAGGACTGGGAGAAAGACTTTGACTTGGACATGACTGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444377.5
CDS CCA 90 bp TTGAGCCTCGGAAAAGGCAGGTTACTAAAGAGCGGAGAAGCACTTTaGCCCAGAGGCTCCAAGAGAGTCACAGAAATCTTCCAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: LSLGKGRLLKSGEAL*PRGSKRVTEIFQRK
Trigger: TTTCCTCTGGAAGATTTCTGTGACTCTCTTGGAGCCTCTGGGCCAAAGTGCTTCTCCGCTCTTTAGTAACCTGCCTTTTCCGAGGCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444377.5
CDS-3UTR CAA 90 bp CCTCTCCCTTGGGTCATCCTATTGTTGGCACAAGTCAGAGTTTCTGGCCGGGATGAACCTTTGCCTCTTTaGGAGATATGGGTGAAATGC +
Preference number: 5 (lower is better)
Translates to: PLPWVILLLAQVRVSGRDEPLPL*EIWVKC
Trigger: GCATTTCACCCATATCTCCAAAAGAGGCAAAGGTTC...ATCCCGGCCAGAAACTCTGACTTGTGCCAACAATAGGATGACCCAAGGGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp AGAGCTCTGGTTGGCAGAGGAGATTTGGGGGAACATTCTCAGTCTTCCAGGGCTGAACCTTTGCCTCTTTaGGAGATATGGGTGAAATGC +
Preference number: 5 (lower is better)
Translates to: RALVGRGDLGEHSQSSRAEPLPL*EIWVKC
Trigger: GCATTTCACCCATATCTCCAAAAGAGGCAAAGGTTC...AGCCCTGGAAGACTGAGAATGTTCCCCCAAATCTCCTCTGCCAACCAGAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCTGGCCACAGGAACCTTaGCCTCTTTTGGAGATATGG +
Preference number: 5 (lower is better)
Translates to: VFSRKTQALLVRRIGFLSWPQEP*PLLEIW
Trigger: CCATATCTCCAAAAGAGGCAAAGGTTCCTGTGGCCA...GGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GCTCTAACTGATGGACTTTATAGAAATACCGATGCCAGAATTCTGAATGGGAAAGGTGCAGTGGCCGGGTaGGCGATCTGTGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: ALTDGLYRNTDARILNGKGAVAG*AICVTR
Trigger: CCTCGTGACACAGATCGCCAACCCGGCCACTGCACC...TTTCCCATTCAGAATTCTGGCATCGGTATTTCTATAAAGTCCATCAGTTAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CAA 90 bp AGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGGAGCCTTTCTTTCCATaGTTGGAGGGTGTAGACTTC +
Preference number: 5 (lower is better)
Translates to: SRKTQALLVRRIGFLSLGEPFFP*LEGVDF
Trigger: GAAGTCTACACCCTCCAACAATGGAAAGAAAGGCTC...CCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCCACGGAACGTTTTCTaGCTTTGTTCCTACTCTTGG +
Preference number: 5 (lower is better)
Translates to: ALLVRRIGFLSLGSSYCWPRNVF*LCSYSW
Trigger: CCAAGAGTAGGAACAAAGCAAGAAAACGTTCCGTGG...CCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CAA 90 bp GTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCTATGGACAGAGTATGTaGTCTCAGCTTCCTCCGAGA +
Preference number: 5 (lower is better)
Translates to: VFSRKTQALLVRRIGFLSYGQSM*SQLPPR
Trigger: TCTCGGAGGAAGCTGAGACAACATACTCTGTCCATA...GGAGAGGAAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000455895.7
CDS-3UTR CAA 90 bp GCTCTTCTGGTGAGGAGGATAGGTTTCCTCTCCCTTGGGTCATCCTATTGTTGGCTGAAGCCATTCTTGTaGCAACTTCCTTTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: ALLVRRIGFLSLGSSYCWLKPFL*QLPFQR
Trigger: CCTTTGGAAAGGAAGTTGCAACAAGAATGGCTTCAG...CCAACAATAGGATGACCCAAGGGAGAGGAAACCTATCCTCCTCACCAGAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR CAA 90 bp GGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTTCTTCTCTTTGACTGCTaGGTAGCTCTGCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GSPSGNVEILATGTFASFLLFDC*VALLQP
Trigger: TGGCTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAG...AAAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CAA 90 bp ACCGATGCCAGAATTCTGAATGGGAAACAGCTGCTGGAACCATCTTGGTGTAGAGAGCCTTTCTTTCCATaGTTGGAGGGTGTAGACTTC +
Preference number: 5 (lower is better)
Translates to: TDARILNGKQLLEPSWCREPFFP*LEGVDF
Trigger: GAAGTCTACACCCTCCAACAATGGAAAGAAAGGCTC...TCTACACCAAGATGGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS-3UTR CAA 90 bp ACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTGAACCTTTGCCTCTTTaGGAGATATGGGTGAAATGC +
Preference number: 5 (lower is better)
Translates to: TVGVQQKNTGSSGEEDRFEPLPL*EIWVKC
Trigger: GCATTTCACCCATATCTCCAAAAGAGGCAAAGGTTC...AAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000419121.6
ENST00000444377.5
ENST00000455895.7
ENST00000526031.5
CDS-3UTR CAA 90 bp GGTTCTCCTTCAGGGAATGTAGAAATTTTGGCCACAGGAACCTTTGCCTCTTTTGGGAATGTAGAAATTTaGGCCACAGGAACCTTTGCC +
Preference number: 5 (lower is better)
Translates to: GSPSGNVEILATGTFASFGNVEI*ATGTFA
Trigger: GGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCC...AAAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS-3UTR CAA 90 bp CATGTCTCTCTAATCTGTCCACCTCTTTCTAACAGGCTCATAAGTTACATGATGCCGCTGGTAGCTGTTTaGTGTCCTAAACTACAGGGG +
Preference number: 5 (lower is better)
Translates to: HVSLICPPLSNRLISYMMPLVAV*CPKLQG
Trigger: CCCCTGTAGTTTAGGACACAAAACAGCTACCAGCGG...CATCATGTAACTTATGAGCCTGTTAGAAAGAGGTGGACAGATTAGAGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341071.11
CDS-3UTR CAA 90 bp ACAGTGGGTGTTCAGCAGAAAAACACAGGCTCTTCTGGTGAGGAGGATAGGTTTCAACTGAAGCCATTCTaGTTGCAACTTCCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: TVGVQQKNTGSSGEEDRFQLKPF*LQLPFQ
Trigger: TTGGAAAGGAAGTTGCAACAAGAATGGCTTCAGTTG...AAACCTATCCTCCTCACCAGAAGAGCCTGTGTTTTTCTGCTGAACACCCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455895.7
CDS-3UTR CAA 90 bp GCTCCTGCTCTAACTGATGGACTTTATAGAAATACCGATGCCAGAATTCTGAATGAACCTTTGCCTCTTTaGGAGATATGGGTGAAATGC +
Preference number: 5 (lower is better)
Translates to: APALTDGLYRNTDARILNEPLPL*EIWVKC
Trigger: GCATTTCACCCATATCTCCAAAAGAGGCAAAGGTTC...ATTCAGAATTCTGGCATCGGTATTTCTATAAAGTCCATCAGTTAGAGCAGGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373520.8
ENST00000527513.5
CDS CAA 90 bp TTAGCGCCCGCAAAAGTTGGGCGGGGCTGGTTGGACCAGGTTGCATaGAGGCGGCGCAGGGCCCTGCTGAGGGAAGAAGGGCACGGGCCC +
Preference number: 6 (lower is better)
Translates to: LAPAKVGRGWLDQVA*RRRRALLREEGHGP
Trigger: GGGCCCGTGCCCTTCTTCCCTCAGCAGGGCCCTGCGCCGCCTCAATGCAACCTGGTCCAACCAGCCCCGCCCAACTTTTGCGGGCGCTAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531222.1
CDS CAA 72 bp ACCGCGGTGCGATTCCTGCCCGCCCAAGGATCCGGTTaGTTCCCCGCTCAGATGTACCCTGCGGGCCGAGGC +
Preference number: 6 (lower is better)
Translates to: TAVRFLPAQGSG*FPAQMYPAGRG
Trigger: GCCTCGGCCCGCAGGGTACATCTGAGCGGGGAACAAACCGGATCCTTGGGCGGGCAGGAATCGCACCGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474414.5
ENST00000530753.1
ENST00000530876.5
CDS CAA 90 bp TCTGGCAGCACCGCGGTGCGATTCCTGCCCGCCCAAGGATCCGGTTaGTTCCCCGCTCAGATGTACCCTGCGGGCCGAGGCTTCGCAGAC +
Preference number: 6 (lower is better)
Translates to: SGSTAVRFLPAQGSG*FPAQMYPAGRGFAD
Trigger: GTCTGCGAAGCCTCGGCCCGCAGGGTACATCTGAGCGGGGAACAAACCGGATCCTTGGGCGGGCAGGAATCGCACCGCGGTGCTGCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474414.5
ENST00000530753.1
ENST00000530876.5
CDS GCA 72 bp CCAAGGATCCGGTTTGTTCCCCGCTCAGATGTACCCTaGGGGCCGAGGCTTCGCAGACCGCTTGCCCACCCC +
Preference number: 6 (lower is better)
Translates to: PRIRFVPRSDVP*GPRLRRPLAHP
Trigger: GGGGTGGGCAAGCGGTCTGCGAAGCCTCGGCCCGCAGGGTACATCTGAGCGGGGAACAAACCGGATCCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474414.5
ENST00000530753.1
ENST00000530876.5
CDS GCA 72 bp GCCCGCAAAAGTTGGGCGGGGCTGGTTGGACCAGGTTaGATTGAGGCGGCGCAGGGCCCTGCTGAGGGAAGA +
Preference number: 6 (lower is better)
Translates to: ARKSWAGLVGPG*IEAAQGPAEGR
Trigger: TCTTCCCTCAGCAGGGCCCTGCGCCGCCTCAATGCAACCTGGTCCAACCAGCCCCGCCCAACTTTTGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531222.1
CDS CAA 72 bp GCGCCCCGGGAACAGGCTGCAATAGCCAGCTTCTCCTaGACCACGCTGGCCGTGGCTGCGATGGTACAGGCC +
Preference number: 6 (lower is better)
Translates to: APREQAAIASFS*TTLAVAAMVQA
Trigger: GGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTATTGCAGCCTGTTCCCGGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000446293.6
ENST00000530753.1
CDS CAA 72 bp CAGATGTACCCTGCGGGCCGAGGCTTCGCAGACCGCTaGCCCACCCCCTCACAATGCGACTCCACTCTGCCC +
Preference number: 6 (lower is better)
Translates to: QMYPAGRGFADR*PTPSQCDSTLP
Trigger: GGGCAGAGTGGAGTCGCATTGTGAGGGGGTGGGCAAGCGGTCTGCGAAGCCTCGGCCCGCAGGGTACATCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474414.5
ENST00000530753.1
ENST00000530876.5
CDS GCA 72 bp ACGCTGGCCGTGGCTGCGATGGTACAGGCCGTGTCATaGTGCACCACCTGGGTAAACTCCGTCAGGTCCCGC +
Preference number: 6 (lower is better)
Translates to: TLAVAAMVQAVS*CTTWVNSVRSR
Trigger: GCGGGACCTGACGGAGTTTACCCAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000341071.11
ENST00000373520.8
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000474414.5
ENST00000527513.5
ENST00000530753.1
ENST00000530876.5
ENST00000533084.1
CDS GCA 72 bp AGATGTACCCTGCGGGCCGAGGCTTCGCAGACCGCTTaGCCACCCCCTCACAATGCGACTCCACTCTGCCCT +
Preference number: 6 (lower is better)
Translates to: RCTLRAEASQTA*PPPHNATPLCP
Trigger: AGGGCAGAGTGGAGTCGCATTGTGAGGGGGTGGGCAAGCGGTCTGCGAAGCCTCGGCCCGCAGGGTACATCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474414.5
ENST00000530753.1
ENST00000530876.5
CDS GCA 72 bp GCCAGCCAGCTTCTCCTTGACCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTCATGCTGCACCACCTG +
Preference number: 6 (lower is better)
Translates to: ASQLLLDHAGRG*DGTGRVMLHHL
Trigger: CAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTGGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527513.5
CDS CCA 72 bp CCATCCCACGTCCTCCCTGTGGAAGACAGACACATCTaGCAGCACCGCGGTGCGATTCCTGCCCGCCCAAGG +
Preference number: 6 (lower is better)
Translates to: PSHVLPVEDRHI*QHRGAIPARPR
Trigger: CCTTGGGCGGGCAGGAATCGCACCGCGGTGCTGCCAGATGTGTCTGTCTTCCACAGGGAGGACGTGGGATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474414.5
ENST00000530753.1
ENST00000530876.5
CDS CAA 72 bp GGCGTCAAACAATTCCGGGGGCCAGCCAGCTTCTCCTaGACCACGCTGGCCGTGGCTGCGATGGTACAGGCC +
Preference number: 6 (lower is better)
Translates to: GVKQFRGPASFS*TTLAVAAMVQA
Trigger: GGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTGGCCCCCGGAATTGTTTGACGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527513.5
CDS CAA 72 bp GCAAAAGTTGGGCGGGGCTGGTTGGACCAGGTTGCATaGAGGCGGCGCAGGGCCCTGCTGAGGGAAGAAGGG +
Preference number: 6 (lower is better)
Translates to: AKVGRGWLDQVA*RRRRALLREEG
Trigger: CCCTTCTTCCCTCAGCAGGGCCCTGCGCCGCCTCAATGCAACCTGGTCCAACCAGCCCCGCCCAACTTTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531222.1
CDS TCA 72 bp TCCACTCTGCCCTTTCAGATCAGTCCACGCCCCCGCTaGTCTCACGTTCCCCACCGGGACTCTCGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: STLPFQISPRPR*SHVPHRDSRPA
Trigger: TGCTGGGCGAGAGTCCCGGTGGGGAACGTGAGATCAGCGGGGGCGTGGACTGATCTGAAAGGGCAGAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474414.5
ENST00000530753.1
ENST00000530876.5
CDS GCA 72 bp CTGGCCGTGGCTGCGATGGTACAGGCCGTGTCATGCTaGACCACCTGGGTAAACTCCGTCAGGTCCCGCTTC +
Preference number: 6 (lower is better)
Translates to: LAVAAMVQAVSC*TTWVNSVRSRF
Trigger: GAAGCGGGACCTGACGGAGTTTACCCAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000341071.11
ENST00000373520.8
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000474414.5
ENST00000527513.5
ENST00000530753.1
ENST00000530876.5
ENST00000533084.1
CDS GCA 72 bp AGCAGCCAGCTTCTCCTTGACCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTCATGCTGCACCACCTG +
Preference number: 6 (lower is better)
Translates to: SSQLLLDHAGRG*DGTGRVMLHHL
Trigger: CAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419121.6
CDS GCA 72 bp CGTAGCCAGCTTCTCCTTGACCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTCATGCTGCACCACCTG +
Preference number: 6 (lower is better)
Translates to: RSQLLLDHAGRG*DGTGRVMLHHL
Trigger: CAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTACG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000444377.5
ENST00000455895.7
ENST00000530876.5
CDS GCA 72 bp CACAGCCAGCTTCTCCTTGACCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTCATGCTGCACCACCTG +
Preference number: 6 (lower is better)
Translates to: HSQLLLDHAGRG*DGTGRVMLHHL
Trigger: CAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTGTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533084.1
CDS CAA 72 bp GTTGCTCCTGAGGAGCCTTCCGTAGCCAGCTTCTCCTaGACCACGCTGGCCGTGGCTGCGATGGTACAGGCC +
Preference number: 6 (lower is better)
Translates to: VAPEEPSVASFS*TTLAVAAMVQA
Trigger: GGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTACGGAAGGCTCCTCAGGAGCAAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000444377.5
ENST00000455895.7
ENST00000530876.5
CDS CAA 72 bp GGGAGGGTTTGGGTGGTACTCACAGCCAGCTTCTCCTaGACCACGCTGGCCGTGGCTGCGATGGTACAGGCC +
Preference number: 6 (lower is better)
Translates to: GRVWVVLTASFS*TTLAVAAMVQA
Trigger: GGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTGTGAGTACCACCCAAACCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533084.1
CDS CAA 90 bp TTCCCCGCTCAGATGTACCCTGCGGGCCGAGGCTTCGCAGACCGCTaGCCCACCCCCTCACAATGCGACTCCACTCTGCCCTTTCAGATC +
Preference number: 6 (lower is better)
Translates to: FPAQMYPAGRGFADR*PTPSQCDSTLPFQI
Trigger: GATCTGAAAGGGCAGAGTGGAGTCGCATTGTGAGGGGGTGGGCAAGCGGTCTGCGAAGCCTCGGCCCGCAGGGTACATCTGAGCGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474414.5
ENST00000530753.1
ENST00000530876.5
CDS TCA 72 bp AGGGAAGAAGGGCACGGGCCCGGCTTACCTTCTCTTTaGCTGCTTGGTAGCTCTGCTGCAGCCAGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: REEGHGPGLPSL*LLGSSAAASSA
Trigger: GGCGGAGCTGGCTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAGGTAAGCCGGGCCCGTGCCCTTCTTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531222.1
CDS GCA 72 bp ACCGCTTGCCCACCCCCTCACAATGCGACTCCACTCTaGCCTTTCAGATCAGTCCACGCCCCCGCTGATCTC +
Preference number: 6 (lower is better)
Translates to: TACPPPHNATPL*PFRSVHAPADL
Trigger: GAGATCAGCGGGGGCGTGGACTGATCTGAAAGGGCAGAGTGGAGTCGCATTGTGAGGGGGTGGGCAAGCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000474414.5
ENST00000530753.1
ENST00000530876.5
CDS GCA 72 bp TGTAGCCAGCTTCTCCTTGACCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTCATGCTGCACCACCTG +
Preference number: 6 (lower is better)
Translates to: CSQLLLDHAGRG*DGTGRVMLHHL
Trigger: CAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTACA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474414.5
CDS CAA 72 bp AAGGGCACGGGCCCGGCTTACCTTCTCTTTGACTGCTaGGTAGCTCTGCTGCAGCCAGCTCCGCCACCATCC +
Preference number: 6 (lower is better)
Translates to: KGTGPAYLLFDC*VALLQPAPPPS
Trigger: GGATGGTGGCGGAGCTGGCTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAGGTAAGCCGGGCCCGTGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531222.1
CDS CAA 90 bp AGCCCAGGACAGGACAGGTTGCGAGGGGCAGTTACTTGGGAGGGTTaGGGTGGTACTCACAGCCAGCTTCTCCTTGACCACGCTGGCCGT +
Preference number: 6 (lower is better)
Translates to: SPGQDRLRGAVTWEG*GGTHSQLLLDHAGR
Trigger: ACGGCCAGCGTGGTCAAGGAGAAGCTGGCTGTGAGTACCACCCAAACCCTCCCAAGTAACTGCCCCTCGCAACCTGTCCTGTCCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533084.1
CDS GCA 72 bp AATAGCCAGCTTCTCCTTGACCACGCTGGCCGTGGCTaGGATGGTACAGGCCGTGTCATGCTGCACCACCTG +
Preference number: 6 (lower is better)
Translates to: NSQLLLDHAGRG*DGTGRVMLHHL
Trigger: CAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTATT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341071.11
ENST00000446293.6
ENST00000530753.1
CDS GCA 72 bp AAGAAGGGCACGGGCCCGGCTTACCTTCTCTTTGACTaGTTGGTAGCTCTGCTGCAGCCAGCTCCGCCACCA +
Preference number: 6 (lower is better)
Translates to: KKGTGPAYLLFD*LVALLQPAPPP
Trigger: TGGTGGCGGAGCTGGCTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAGGTAAGCCGGGCCCGTGCCCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531222.1
CDS CAA 90 bp CAGTTACTTGGGAGGGTTTGGGTGGTACTCACAGCCAGCTTCTCCTaGACCACGCTGGCCGTGGCTGCGATGGTACAGGCCGTGTCATGC +
Preference number: 6 (lower is better)
Translates to: QLLGRVWVVLTASFS*TTLAVAAMVQAVSC
Trigger: GCATGACACGGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTGTGAGTACCACCCAAACCCTCCCAAGTAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533084.1
CDS CCA 72 bp TTCCGGGGGCCCATCTGGTTCATTACAGTAGGTTGCTaGGTCCGACTGCAGGCTATAGAGGCGAGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: FRGPIWFITVGC*VRLQAIEASSQ
Trigger: CTGGCTGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419121.6
CDS CCA 72 bp TCAGCCTCATCCTTGAGACTTAGCGCCCGCAAAAGTTaGGCGGGGCTGGTTGGACCAGGTTGCATTGAGGCG +
Preference number: 6 (lower is better)
Translates to: SASSLRLSARKS*AGLVGPGCIEA
Trigger: CGCCTCAATGCAACCTGGTCCAACCAGCCCCGCCCAACTTTTGCGGGCGCTAAGTCTCAAGGATGAGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531222.1
CDS CCA 72 bp AGCCCAGGACAGGACAGGTTGCGAGGGGCAGTTACTTaGGAGGGTTTGGGTGGTACTCACAGCCAGCTTCTC +
Preference number: 6 (lower is better)
Translates to: SPGQDRLRGAVT*EGLGGTHSQLL
Trigger: GAGAAGCTGGCTGTGAGTACCACCCAAACCCTCCCAAGTAACTGCCCCTCGCAACCTGTCCTGTCCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533084.1
CDS CAA 72 bp CTGCAGGCTATAGAGGCGAGCCTTCTCTTTGACTGCTaGGTAGCTCTGCTGCAGCCAGCTCCGCCACCATCC +
Preference number: 6 (lower is better)
Translates to: LQAIEASLLFDC*VALLQPAPPPS
Trigger: GGATGGTGGCGGAGCTGGCTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAGGCTCGCCTCTATAGCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526031.5
CDS CAA 72 bp GAGCCCAGGACAGGACAGGTTGCGAGGGGCAGTTACTaGGGAGGGTTTGGGTGGTACTCACAGCCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: EPRTGQVARGSY*GGFGWYSQPAS
Trigger: AGAAGCTGGCTGTGAGTACCACCCAAACCCTCCCAAGTAACTGCCCCTCGCAACCTGTCCTGTCCTGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533084.1
CDS CAA 90 bp CCAGACGGTGTGCCCATCAGGGTGATGACATCGCAGTCGATGGTTTaGTCTGGCGAAGGGGCAAAGGTGTCTGAGATCACCCAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: PDGVPIRVMTSQSMV*SGEGAKVSEITQPA
Trigger: AGCTGGCTGGGTGATCTCAGACACCTTTGCCCCTTCGCCAGACAAAACCATCGACTGCGATGTCATCACCCTGATGGGCACACCGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373520.8
CDS GCA 72 bp CAATTCCGGGGGCCCATCTGGTTCATTACAGTAGGTTaGTGGGTCCGACTGCAGGCTATAGAGGCGAGCAGC +
Preference number: 6 (lower is better)
Translates to: QFRGPIWFITVG*WVRLQAIEASS
Trigger: GCTGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419121.6
CDS CCA 72 bp GCTGCGATGGTACAGGCCGTGTCATGCTGCACCACCTaGGTAAACTCCGTCAGGTCCCGCTTCATAAACTCC +
Preference number: 6 (lower is better)
Translates to: AAMVQAVSCCTT*VNSVRSRFINS
Trigger: GGAGTTTATGAAGCGGGACCTGACGGAGTTTACCCAGGTGGTGCAGCATGACACGGCCTGTACCATCGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000341071.11
ENST00000373520.8
ENST00000419121.6
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000474414.5
ENST00000527513.5
ENST00000530753.1
ENST00000530876.5
ENST00000533084.1
CDS CCA 72 bp TTCCGGGGGCCCATCTGGTTCATTACAGTAGGTTGCTaGGTCCGACTGCAGGCTATAGAGGCGAGCCTTCTC +
Preference number: 6 (lower is better)
Translates to: FRGPIWFITVGC*VRLQAIEASLL
Trigger: GAGAAGGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526031.5
CDS CCA 72 bp AGGACAGGTTGCGAGGGGCAGTTACTTGGGAGGGTTTaGGTGGTACTCACAGCCAGCTTCTCCTTGACCACG +
Preference number: 6 (lower is better)
Translates to: RTGCEGQLLGRV*VVLTASFSLTT
Trigger: CGTGGTCAAGGAGAAGCTGGCTGTGAGTACCACCCAAACCCTCCCAAGTAACTGCCCCTCGCAACCTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533084.1
CDS CAA 72 bp CAGGACAGGTTGCGAGGGGCAGTTACTTGGGAGGGTTaGGGTGGTACTCACAGCCAGCTTCTCCTTGACCAC +
Preference number: 6 (lower is better)
Translates to: QDRLRGAVTWEG*GGTHSQLLLDH
Trigger: GTGGTCAAGGAGAAGCTGGCTGTGAGTACCACCCAAACCCTCCCAAGTAACTGCCCCTCGCAACCTGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533084.1
CDS CAA 90 bp CCAGACGGTGTGCCCATCAGGGTGATGACATCGCAGTCGATGGTTTaGTCTGGCGAAGGGGCAAAGGTGTCTGAGATCACCCCTAGGAAG +
Preference number: 6 (lower is better)
Translates to: PDGVPIRVMTSQSMV*SGEGAKVSEITPRK
Trigger: CTTCCTAGGGGTGATCTCAGACACCTTTGCCCCTTCGCCAGACAAAACCATCGACTGCGATGTCATCACCCTGATGGGCACACCGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341071.11
ENST00000444377.5
ENST00000446293.6
ENST00000455895.7
ENST00000530485.1
CDS TCA 72 bp CTTGCCTGCATGACATCACCACTATTTACTGACCTTTaGCTTCCGACACGGCACCGCCCCCTCAAGGACCGC +
Preference number: 6 (lower is better)
Translates to: LACMTSPLFTDL*LPTRHRPLKDR
Trigger: GCGGTCCTTGAGGGGGCGGTGCCGTGTCGGAAGTCAAAGGTCAGTAAATAGTGGTGATGTCATGCAGGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474414.5
CDS CAA 72 bp ACAATTCCGGGGGCCCATCTGGTTCATTACAGTAGGTaGCTGGGTCCGACTGCAGGCTATAGAGGCGAGCAG +
Preference number: 6 (lower is better)
Translates to: TIPGAHLVHYSR*LGPTAGYRGEQ
Trigger: CTGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419121.6
CDS CAA 72 bp CAAAGGTGTCTGAGATCACCCCTTCTCTTTGACTGCTaGGTAGCTCTGCTGCAGCCAGCTCCGCCACCATCC +
Preference number: 6 (lower is better)
Translates to: QRCLRSPLLFDC*VALLQPAPPPS
Trigger: GGATGGTGGCGGAGCTGGCTGCAGCAGAGCTACCAAGCAGTCAAAGAGAAGGGGTGATCTCAGACACCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527163.5
CDS CAA 90 bp CCAGACGGTGTGCCCATCAGGGTGATGACATCGCAGTCGATGGTTTaGTCTGGCGAAGGGGCAAAGGTGTCTGAGATCACCCCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: PDGVPIRVMTSQSMV*SGEGAKVSEITPSL
Trigger: AAGAGAAGGGGTGATCTCAGACACCTTTGCCCCTTCGCCAGACAAAACCATCGACTGCGATGTCATCACCCTGATGGGCACACCGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527163.5
CDS TCA 72 bp CCGCCATCTTGCCTGCATGACATCACCACTATTTACTaGCCTTTGACTTCCGACACGGCACCGCCCCCTCAA +
Preference number: 6 (lower is better)
Translates to: PPSCLHDITTIY*PLTSDTAPPPQ
Trigger: TTGAGGGGGCGGTGCCGTGTCGGAAGTCAAAGGTCAGTAAATAGTGGTGATGTCATGCAGGCAAGATGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474414.5
CDS CAA 90 bp CTCAGTTCAATCGTCATTCAGTCCTGTCCTCAGGCTCCACCAAGCTaGACTCTTTGTCACTGTCCGCAAACGTCGGGTACGGTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: LSSIVIQSCPQAPPS*TLCHCPQTSGTVAS
Trigger: AGAGGCCACCGTACCCGACGTTTGCGGACAGTGACAAAGAGTCAAGCTTGGTGGAGCCTGAGGACAGGACTGAATGACGATTGAACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474414.5
CDS CAA 72 bp ATCGTCATTCAGTCCTGTCCTCAGGCTCCACCAAGCTaGACTCTTTGTCACTGTCCGCAAACGTCGGGTACG +
Preference number: 6 (lower is better)
Translates to: IVIQSCPQAPPS*TLCHCPQTSGT
Trigger: CGTACCCGACGTTTGCGGACAGTGACAAAGAGTCAAGCTTGGTGGAGCCTGAGGACAGGACTGAATGACGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474414.5
CDS CAA 90 bp CTTGAGCCTCGGAAAAGGCAGGTTACTAAAGAGCGGAGAAGCACTTaGGCCCAGAGGCTCCAAGAGAGTCACAGAAATCTTCCAGAGGAA +
Preference number: 6 (lower is better)
Translates to: LEPRKRQVTKERRST*AQRLQESHRNLPEE
Trigger: TTCCTCTGGAAGATTTCTGTGACTCTCTTGGAGCCTCTGGGCCAAAGTGCTTCTCCGCTCTTTAGTAACCTGCCTTTTCCGAGGCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444377.5
CDS TCA 72 bp TCATGTCCAAGTCAAAGTCTTTCTCCCAGTCCTCACTaGTGTCCGTGCTTGAGCCTCGGAAAAGGCAGGTTA +
Preference number: 6 (lower is better)
Translates to: SCPSQSLSPSPH*CPCLSLGKGRL
Trigger: TAACCTGCCTTTTCCGAGGCTCAAGCACGGACATCAGTGAGGACTGGGAGAAAGACTTTGACTTGGACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444377.5
CDS TCA 72 bp TCATGTCCAAGTCAAAGTCTTTCTCCCAGTCCTCACTaGTGTCCGTGCTTGAGCCAACTCTCCTATACGAGG +
Preference number: 6 (lower is better)
Translates to: SCPSQSLSPSPH*CPCLSQLSYTR
Trigger: CCTCGTATAGGAGAGTTGGCTCAAGCACGGACATCAGTGAGGACTGGGAGAAAGACTTTGACTTGGACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463967.1
CDS CAA 72 bp CGGAAAAGGCAGGTTACTAAAGAGCGGAGAAGCACTTaGGCCCAGAGGCTCCAAGAGAGTCACAGAAATCTT +
Preference number: 6 (lower is better)
Translates to: RKRQVTKERRST*AQRLQESHRNL
Trigger: AAGATTTCTGTGACTCTCTTGGAGCCTCTGGGCCAAAGTGCTTCTCCGCTCTTTAGTAACCTGCCTTTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444377.5
CDS CCA 72 bp ACTGTGAGCTTTGTAAGGCCCAGGATTACATCTGTTTaGCTGAAGTCTGTATCCTCAAGACCTATCAGAGTG +
Preference number: 6 (lower is better)
Translates to: TVSFVRPRITSV*LKSVSSRPIRV
Trigger: CACTCTGATAGGTCTTGAGGATACAGACTTCAGCCAAACAGATGTAATCCTGGGCCTTACAAAGCTCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531222.1