RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRWD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000165288

Ensembl transcript IDs: ENST00000373275.5, ENST00000473691.1, ENST00000478415.1, ENST00000487313.1, ENST00000497335.1

Found 303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCGCTGAGTTAAATATCTaGGCGCACAGTTGTGCAGAA +
Preference number: 2 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPAELNI*AHSCAE
Trigger: TTCTGCACAACTGTGCGCTCAGATATTTAACTCAGC...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR CCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCAGAGAGGCAAAAAGTTaGCAGACTGTCCTCCATACA +
Preference number: 2 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPREAKS*QTVLHT
Trigger: TGTATGGAGGACAGTCTGCCAACTTTTTGCCTCTCT...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR GCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTAGTCCCCACACAACTTaGTTTGTAGATTTCCTGGTA +
Preference number: 2 (lower is better)
Translates to: FILNLVECLPLGDKFWVTSPHTT*FVDFLV
Trigger: TACCAGGAAATCTACAAAGCAAGTTGTGTGGGGACT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR TCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTCTTTCTCTTAAAGCCTaGACATCATTTCCACTGCAA +
Preference number: 2 (lower is better)
Translates to: FILNLVECLPLGDKFWVTLSLKA*TSFPLQ
Trigger: TTGCAGTGGAAATGATGTTCAGGCTTTAAGAGAAAG...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGATTCCAACACAAGCCTaGTTTCTGGGGAGGGAAAAA +
Preference number: 2 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWIPTQA*FLGREK
Trigger: TTTTTCCCTCCCCAGAAATCAGGCTTGTGTTGGAAT...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR GCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCGTTACTTTGTTACTTTaGATCTGCGGGAAACAAAGT +
Preference number: 2 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPVTLLL*ICGKQS
Trigger: ACTTTGTTTCCCGCAGATGCAAAGTAACAAAGTAAC...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR GCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTCTGAGCGCACAGTTGTaGAGAATGAGATTTCTAATT +
Preference number: 2 (lower is better)
Translates to: FILNLVECLPLGDKFWVTLSAQL*RMRFLI
Trigger: AATTAGAAATCTCATTCTGCACAACTGTGCGCTCAG...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGCAGGCTGTTATTGAATaGACCAAGCAGCCCACATTT +
Preference number: 2 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWQAVIE*TKQPTF
Trigger: AAATGTGGGCTGCTTGGTGCATTCAATAACAGCCTG...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR CCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTACTATGGTTTAAAGTaGCAGCTGAGTTACAACCAG +
Preference number: 2 (lower is better)
Translates to: FILNLVECLPLGDKFWVTYYGLK*QLSYNQ
Trigger: CTGGTTGTAACTCAGCTGCCACTTTAAACCATAGTA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR CAA 90 bp ATATATATCAAAGATACAGTCCAGTCTTTGGCCAGCTTATTTATCTaGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTA +
Preference number: 2 (lower is better)
Translates to: IYIKDTVQSLASLFI*NLVECLPLGDKFWV
Trigger: TACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAATAAGCTGGCCAAAGACTGGACTGTATCTTTGATATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR TCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGGGTGCTATACTTCTGTaGTACAAAAGCAAAAGAGGG +
Preference number: 2 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLGAILL*YKSKRG
Trigger: CCCTCTTTTGCTTTTGTATCACAGAAGTATAGCACC...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR TCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGGTTCAGTACAAGTCATaGAAGTTTGGCCTGGGAAGA +
Preference number: 2 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQVQYKS*KFGLGR
Trigger: TCTTCCCAGGCCAAACTTTCATGACTTGTACTGAAC...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR GCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAAACTCTGTAAGAAGGTaGTATACTTCTGTGATACAA +
Preference number: 2 (lower is better)
Translates to: VCTPSSALKGFQMHEMIENSVRR*YTSVIQ
Trigger: TTGTATCACAGAAGTATAGCACCTTCTTACAGAGTT...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR CCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCGTATACTGGCATAAATaGAAAAGCACCAATGTGAAA +
Preference number: 2 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPVYWHK*KSTNVK
Trigger: TTTCACATTGGTGCTTTTCCATTTATGCCAGTATAC...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR CCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTAACAGAAGAACCCTTTaGAATGATATGAGCAGAATC +
Preference number: 2 (lower is better)
Translates to: FILNLVECLPLGDKFWVTNRRTL*NDMSRI
Trigger: GATTCTGCTCATATCATTCCAAAGGGTTCTTCTGTT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR CCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGACTCAAGCTCACTTATaGAACCATGTGCACTCTACT +
Preference number: 2 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWTQAHL*NHVHST
Trigger: AGTAGAGTGCACATGGTTCCATAAGTGAGCTTGAGT...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGCCATGTGCACTCTACTaGTGTAAACAAGACAATAAG +
Preference number: 2 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWPCALY*CKQDNK
Trigger: CTTATTGTCTTGTTTACAGCAGTAGAGTGCACATGG...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR GCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTACAGAAACAGAAATTaGTATTATCCCTCTTACCTC +
Preference number: 2 (lower is better)
Translates to: FILNLVECLPLGDKFWVTYRNRN*YYPSYL
Trigger: GAGGTAAGAGGGATAATAGCAATTTCTGTTTCTGTA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR GCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTAAAAATAGCTTGGTCTaGTGTCTAGTAACAGAAGTT +
Preference number: 2 (lower is better)
Translates to: FILNLVECLPLGDKFWVTKNSLV*CLVTEV
Trigger: AACTTCTGTTACTAGACAGCAGACCAAGCTATTTTT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGATTTTGTACTTGCTTTaGTATGGCTGGACCCAGATT +
Preference number: 2 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWILYLL*YGWTQI
Trigger: AATCTGGGTCCAGCCATAGCAAAGCAAGTACAAAAT...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR GCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTGTTTATACATGTATATaGTCTCACGGGCCTAAATAT +
Preference number: 2 (lower is better)
Translates to: FILNLVECLPLGDKFWVTVYTCI*SHGPKY
Trigger: ATATTTAGGCCCGTGAGAGCATATACATGTATAAAC...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR TCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGCATTTCCACTGCAAGTaGAAACTGCTTAAAGATGTT +
Preference number: 2 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLHFHCK*KLLKDV
Trigger: AACATCTTTAAGCAGTTTTCACTTGCAGTGGAAATG...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGAAGCCAAAGTATTATTaGTTTCAGGAATACAGGCAC +
Preference number: 2 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWKPKYY*FQEYRH
Trigger: GTGCCTGTATTCCTGAAATCAATAATACTTTGGCTT...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGCTCCTACACTTACACTaGATTAAAGCACCATTTACA +
Preference number: 2 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWLLHLH*IKAPFT
Trigger: TGTAAATGGTGCTTTAATTCAGTGTAAGTGTAGGAG...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR CCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGCAAGTCATGAAAGTTTaGCCTGGGAAGAGTAAAATA +
Preference number: 2 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWQVMKV*PGKSKI
Trigger: TATTTTACTCTTCCCAGGCCAAACTTTCATGACTTG...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR CAA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTGGAGTAAAACTGACCTaGGAACTCAAGCTCACTTAT +
Preference number: 3 (lower is better)
Translates to: FILNLVECLPLGDKFWVTGVKLT*ELKLTY
Trigger: ATAAGTGAGCTTGAGTTCCAAGGTCAGTTTTACTCC...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR CAA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCAGTTACTTTGTTACTTaGCATCTGCGGGAAACAAAG +
Preference number: 3 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPSYFVT*HLRETK
Trigger: CTTTGTTTCCCGCAGATGCAAAGTAACAAAGTAACT...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR CAA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTATCTGAGCGCACAGTaGTGCAGAATGAGATTTCTA +
Preference number: 3 (lower is better)
Translates to: FILNLVECLPLGDKFWVTYLSAQ*CRMRFL
Trigger: TAGAAATCTCATTCTGCACAACTGTGCGCTCAGATA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR TCA 72 bp CACAACATGAGTGTGCAGTGCAATAAGGTTCTTTCCTaGAAGACTAGAACAGAAGAACCCTTTGGAATGATA +
Preference number: 3 (lower is better)
Translates to: HNMSVQCNKVLS*KTRTEEPFGMI
Trigger: TATCATTCCAAAGGGTTCTTCTGTTCTAGTCTTTCAGGAAAGAACCTTATTGCACTGCACACTCATGTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR CAA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTACTGTTCAAAGAAGTaGTTCTTTGTGGATGAGGAT +
Preference number: 3 (lower is better)
Translates to: FILNLVECLPLGDKFWVTYCSKK*FFVDED
Trigger: ATCCTCATCCACAAAGAACAACTTCTTTGAACAGTA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR CAA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTCATTCCTACTAAGCTaGTTCTATTTCTCCTTAGTC +
Preference number: 3 (lower is better)
Translates to: FILNLVECLPLGDKFWVTSFLLS*FYFSLV
Trigger: GACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR CCA 72 bp AATATACAGGCTAAGAGCTGTAGAGAGGCAAAAAGTTaGCAGACTGTCCTCCATACAAAATGTTCTCTTTTT +
Preference number: 3 (lower is better)
Translates to: NIQAKSCREAKS*QTVLHTKCSLF
Trigger: AAAAAGAGAACATTTTGTATGGAGGACAGTCTGCCAACTTTTTGCCTCTCTACAGCTCTTAGCCTGTATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR CCA 72 bp ATCAAAAGTCTTGAAACAAATGTATACTGGCATAAATaGAAAAGCACCAATGTGAAAGGAAGCAGAAGTCCC +
Preference number: 3 (lower is better)
Translates to: IKSLETNVYWHK*KSTNVKGSRSP
Trigger: GGGACTTCTGCTTCCTTTCACATTGGTGCTTTTCCATTTATGCCAGTATACATTTGTTTCAAGACTTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR-3UTR CAA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGTGGAGATCAAAAGTCTaGAAACAAATGTATACTGGC +
Preference number: 3 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQWRSKV*KQMYTG
Trigger: GCCAGTATACATTTGTTTCAAGACTTTTGATCTCCA...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAGCTGGCGGGGGCGGGTaGGGGCGCTGCCTCTATTGT +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEAGGGG*GRCLYC
Trigger: ACAATAGAGGCAGCGCCCCCACCCGCCCCCGCCAGC...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCGTGGTGAAGCCCCCATaGCCGGGAGTCCCGCCGCTT +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPVVKPP*PGVPPL
Trigger: AAGCGGCGGGACTCCCGGGCATGGGGGCTTCACCAC...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAACTGCCTCTATTGTGGTaGAGCCCCCATGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIELPLLW*SPHARE
Trigger: CTCCCGGGCATGGGGGCTTCACCACAATAGAGGCAG...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTTTCCCGAGGGGGTTTaGGGGCTTCGCTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTFPEGV*GLRSGG
Trigger: CCCTCCGGAGCGAAGCCCCCAAACCCCCTCGGGAAA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCGAAGCTGAATGGCCCTaGAGGACTGCAACGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPEAEWP*RTATGA
Trigger: TGCACCCGTTGCAGTCCTTCAGGGCCATTCAGCTTC...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGCCTCCCAGGCTCGAGTaGTCCTCCCACCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWPPRLE*SSHLSP
Trigger: GGGAGACAGGTGGGAGGATCACTCGAGCCTGGGAGG...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGGGCGGGTGGGGGCGCTaGCTCTATTGTGGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWGGWGR*LYCGEA
Trigger: GGCTTCACCACAATAGAGGCAGCGCCCCCACCCGCC...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAGGCACTGAGATCCACTaGAACAGCAAAAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEGTEIH*NSKRAG
Trigger: GCCAGCCCTTTTGCTGTTCCAGTGGATCTCAGTGCC...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAATCCACCGAAGCTCGATaGAGAAAATGGCCCATCTGG +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIESTEAR*RKWPIW
Trigger: CCAGATGGGCCATTTTCTTCATCGAGCTTCGGTGGA...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTATGGCCCTGAAGGACTaGAACGGGTGCACAAGTTCG +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTMALKD*NGCTSS
Trigger: CGAACTTGTGCACCCGTTGCAGTCCTTCAGGGCCAT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGAGCTCGGCTTCGATCTaGGTAGGTGCTGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLSSASI*VGAAAI
Trigger: GATGGCGGCAGCACCTACCCAGATCGAAGCCGAGCT...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCGGAAGTAATAGAAGCTaGATGGCCCTGAAGGACTGC +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPGSNRS*MALKDC
Trigger: GCAGTCCTTCAGGGCCATTCAGCTTCTATTACTTCC...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTTCTGCTCCACGCCATaGGATCTCTTTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTFCSTP*DLFQWP
Trigger: TGGCCACTGAAAGAGATCTCATGGCGTGGAGCAGAA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTACAAGGGGTAGGCACTaGGATCCACTGGAACAGCAA +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTTRGRH*DPLEQQ
Trigger: TTGCTGTTCCAGTGGATCTCAGTGCCTACCCCTTGT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGGATCTGGGTAGGTGCTaGCGCCATCCTTTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLDLGRC*RHPFPE
Trigger: CTCGGGAAAAGGATGGCGGCAGCACCTACCCAGATC...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAGTCTGGAGGAATGTGTaGATTTGCTGCCACCAGATC +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEVWRNV*ICCHQI
Trigger: GATCTGGTGGCAGCAAATGCACACATTCCTCCAGAC...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCCCCCACTCTCCTTCCTaGGGTTTGTATAGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPPHSPS*GLYSKA
Trigger: TGCTTTGCTATACAAACCCCAGGAAGGAGAGTGGGG...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
46% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAGCTTTCCCTGGGTCATaGCTATTTCCACTTCGGCTA +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEAFPGS*LFPLRL
Trigger: TAGCCGAAGTGGAAATAGCCATGACCCAGGGAAAGC...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCTGTCTCCCAAGTACCTaGGACTTACAGGCACACACA +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPCLPST*DLQAHT
Trigger: TGTGTGTGCCTGTAAGTCCCAGGTACTTGGGAGACA...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAGATGAAGGGAAAATATaGCCAAAGCGACTACAGCCG +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEDEGKI*PKRLQP
Trigger: CGGCTGTAGTCGCTTTGGTCATATTTTCCCTTCATC...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGGGAGGAGGCATGAGGTaGGGAGCTTGTTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWGGGMR*GACWVC
Trigger: ACAAACCCAACAAGCTCCTCACCTCATGCCTCCTCC...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCGCACAAGGAAGTCAATaGCATCCGGCATGTCATGAT +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPAQGSQ*HPACHD
Trigger: ATCATGACATGCCGGATGTCATTGACTTCCTTGTGC...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAAGGTGGTTGATGCCCTaGATAACCCGTTCACATTCT +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIERWLMP*ITRSHS
Trigger: AGAATGTGAACGGGTTATTCAGGGCATCAACCACCT...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCTTCTGCCTCGGCATTTaGCCTTTCTTCCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPFCLGI*PFFQMK
Trigger: CTTCATCTGGAAGAAAGGTCAAATGCCGAGGCAGAA...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTGAACTGCAAAGATGCTaGCCAGGCAAGGTGGCAATT +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTELQRC*PGKVAI
Trigger: AATTGCCACCTTGCCTGGTCAGCATCTTTGCAGTTC...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGTTCGATCTGGGTAGGTaGTGCCGCCATCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWFDLGR*CRHPFP
Trigger: GGGAAAAGGATGGCGGCAGCACCTACCCAGATCGAA...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGGGAGGTCTGCCTCTATaGAGAGCCGCAAAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWGGLPL*RAAKAD
Trigger: GTCTGCTTTTGCGGCTCTGCATAGAGGCAGACCTCC...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCCTACAGCCGGTTAATTaGCTGGCAGAGGTGATATTC +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPLQPVN*LAEVIF
Trigger: GAATATCACCTCTGCCAGGCAATTAACCGGCTGTAG...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAATCATCTGCAATACGTaGTCGTTTGGCTCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEIICNT*SFGSGS
Trigger: GCTACCAGAGCCAAACGAGCACGTATTGCAGATGAT...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAACCGCACCATGGCCTTaGCCTTCAATCATGTTAAAG +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIETAPWP*PSIMLK
Trigger: CTTTAACATGATTGAAGGCCAAGGCCATGGTGCGGT...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTGCAGCACAGTGTGGGTaGGCCAACCTCATATTTGAT +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTAAQCG*ANLIFD
Trigger: ATCAAATATGAGGTTGGCCCACCCACACTGTGCTGC...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAAGCACCAACTTCATCTaGAAAGGCAGTTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIESTNFI*KGSSFW
Trigger: CCAGAAGGAACTGCCTTTCCAGATGAAGTTGGTGCT...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCAGAAAGAAGATCAGCTaGCTGTCGAAATGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPRKKIS*LSKWLR
Trigger: TCGGAGCCATTTCGACAGCCAGCTGATCTTCTTTCT...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGTCCTGCACTAGCACCTaGGCGGATTTGTTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQSCTST*ADLLQG
Trigger: ACCCTGCAACAAATCCGCTCAGGTGCTAGTGCAGGA...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTATTGCCTGGCAGAGGTaGTATTCACCACATTTGGAG +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTIAWQR*YSPHLE
Trigger: CTCCAAATGTGGTGAATATCACCTCTGCCAGGCAAT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCAGCAGCAAATGTCCATaGGAATCTGTGCAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPSSKCP*ESVQAK
Trigger: TTTTGCCTGCACAGATTCTCATGGACATTTGCTGCT...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCAGGGACACAGGTATATaGCAAAACCTGGACTGGTTA +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPRDTGI*QNLDWL
Trigger: TAACCAGTCCAGGTTTTGTCATATACCTGTGTCCCT...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAATTCCAACACAAGCCTaGTTTCTGGGGAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEIPTQA*FLGREK
Trigger: TTTTTCCCTCCCCAGAAATCAGGCTTGTGTTGGAAT...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGTTGCAGGGTCCAGACTaGAAGAACCTAGCGATCAGG +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWLQGPD*KNLAIR
Trigger: CCTGATCGCTAGGTTCTTGCAGTCTGGACCCTGCAA...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTAGGAATGTGTGCATTTaGTGCCACCAGATCCTCGAA +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTRNVCI*CHQILE
Trigger: TTCGAGGATCTGGTGGCAGCAAATGCACACATTCCT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGGTAGTTCTGGAGGTCTaGCTCTATGCAGAGCCGCAA +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWVVLEV*LYAEPQ
Trigger: TTGCGGCTCTGCATAGAGGCAGACCTCCAGAACTAC...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGGTTTGCGCTGTGTCCTaGGTAAAGAACGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQVCAVS*VKNAHS
Trigger: GCTGTGGGCGTTCTTTACGCAGGACACAGCGCAAAC...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTCCGAAGCGTCACTTGTaGCAACAGTTTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTPKRHL*QQFHLP
Trigger: AGGAAGATGAAACTGTTGGCACAAGTGACGCTTCGG...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCAATTGGGTCCAGAAATaGAAGCTTCAAGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPNWVQK*KLQAAQ
Trigger: CTGTGCTGCTTGAAGCTTGCATTTCTGGACCCAATT...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCCAGGCTGTTATTGAATaGACCAAGCAGCCCACATTT +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPQAVIE*TKQPTF
Trigger: AAATGTGGGCTGCTTGGTGCATTCAATAACAGCCTG...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCAACTATAGGACTGTCTaGCTCATTGAAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPNYRTV*LIESPG
Trigger: GCCAGGACTTTCAATGAGCCAGACAGTCCTATAGTT...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGAGCTGGCTGTCGAAATaGCTCCGAGTCTTCACGTTC +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWSWLSK*LRVFTF
Trigger: GAACGTGAAGACTCGGAGCCATTTCGACAGCCAGCT...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGTGGAACAACAGACTCTaGGGATTCTCCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWWNNRL*GFSLLL
Trigger: GAGCAAGAGGGAGAATCCTCAGAGTCTGTTGTTCCA...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAATCTGTTCTGGAAGTTaGTTCAGAGTCAGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEICSGS*FRVRVR
Trigger: TCTGACTCTGACTCTGAATCAACTTCCAGAACAGAT...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGCCTGAGCGGATTTGTTaGAGGGTCCAGACTGCAAGA +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQPERIC*RVQTAR
Trigger: TCTTGCAGTCTGGACCCTGCAACAAATCCGCTCAGG...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAACCTCATCAGAGCTGCTaGATATTTTACGTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEPHQSC*IFYVLS
Trigger: AGACAACACGTAAAATATGCAGCAGCTCTGATGAGG...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGTGCCTCTTCCTCCTGTaGCTCTGGTCTTCCAATTTC +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLCLFLL*LWSSNF
Trigger: GAAATTGGAAGACCAGAGGCACAGGAGGAAGAGGCA...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAAGTCCCCACACAACTTaGTTTGTAGATTTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIESPHTT*FVDFLV
Trigger: TACCAGGAAATCTACAAAGCAAGTTGTGTGGGGACT...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCTTTAAGGAGGTAGTCTaGAGGAATGTGTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPFKEVV*RNVCIC
Trigger: GCAAATGCACACATTCCTCCAGACTACCTCCTTAAA...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGCTTTCAGTGGCCATCTaGCTCCGAGGAGCATTGTTA +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWLSVAI*LRGALL
Trigger: TAACAATGCTCCTCGGAGCCAGATGGCCACTGAAAG...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGCTCATCTCCCATTTGTaGGACAAATGGGGAACGTCG +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLLISHL*DKWGTS
Trigger: CGACGTTCCCCATTTGTCCCACAAATGGGAGATGAG...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGGCAGTCAATTCTTCCTaGGAGACAGGAACACCAGCA +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLAVNSS*ETGTPA
Trigger: TGCTGGTGTTCCTGTCTCCCAGGAAGAATTGACTGC...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTTTCTGCTTCCCTTTTaGACTAGGTGCTCCACTACT +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTFLLPF*TRCSTT
Trigger: AGTAGTGGAGCACCTAGTCCAAAAGGGAAGCAGAAA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTTCCATCCCATGAGATaGCTAACCCTGGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTFHPMR*LTLAFS
Trigger: AGAAAAAGCCAGGGTTAGCCATCTCATGGGATGGAA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAACTCAAGCTCACTTATaGAACCATGTGCACTCTACT +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIETQAHL*NHVHST
Trigger: AGTAGAGTGCACATGGTTCCATAAGTGAGCTTGAGT...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR CAA 72 bp AAAGATACAGTCCAGTCTTTGGCCAGCTTATTTATCTaGAACCTAGTGGAATGTTTGCCACTGGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: KDTVQSLASLFI*NLVECLPLGDK
Trigger: TTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAATAAGCTGGCCAAAGACTGGACTGTATCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGACCCCAGGAACACTCTaGGGGATCTCTTTATCTAGT +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLTPGTL*GISLSS
Trigger: ACTAGATAAAGAGATCCCTCAGAGTGTTCCTGGGGT...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAGTTTGTGCCTTTAGTTaGTGGACAAAACTGTATGGA +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEVCAFS*WTKLYG
Trigger: TCCATACAGTTTTGTCCATCAACTAAAGGCACAAAC...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTTCCATTCTTGTTGCTaGTACTGCCAAATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTFHSCC*YCQILA
Trigger: GGCAAGAATTTGGCAGTATCAGCAACAAGAATGGAA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTATGTCTTCGAAGCCTaGTGTTTGGGGAAGAAGATA +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTYVFEA*CLGKKI
Trigger: TATCTTCTTCCCCAAACATCAGGCTTCGAAGACATA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGGTATCCAAGATCCACTaGGGGGCAAACCATTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWVSKIH*GANHSS
Trigger: TGAAGAATGGTTTGCCCCTCAGTGGATCTTGGATAC...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTTTCTTTCACAGTGCTaGAGTCCACAGGAGTATCTA +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTFLSQC*SPQEYL
Trigger: TAGATACTCCTGTGGACTTCAGCACTGTGAAAGAAA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGTTCGAGGCAGTCTACTaGAACGTCCTGAAAACATGG +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWFEAVY*NVLKTW
Trigger: CCATGTTTTCAGGACGTTTCAGTAGACTGCCTCGAA...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTGGTGCTATACTTCTGTaGTACAAAAGCAAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTGAILL*YKSKRG
Trigger: CCCTCTTTTGCTTTTGTATCACAGAAGTATAGCACC...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGTTTGCAGGCTGTTATTaGATGCACCAAGCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQFAGCY*MHQAAH
Trigger: GTGGGCTGCTTGGTGCATTCAATAACAGCCTGCAAA...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGTCGAAGCTTCTTCGGTaGTCTTTCCCCTCCCAATCT +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQSKLLR*SFPSQS
Trigger: AGATTGGGAGGGGAAAGAGCACCGAAGAAGCTTCGA...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGAAGGACTGCAACGGGTaGACAAGTTCGAAGACACCA +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQKDCNG*TSSKTP
Trigger: TGGTGTCTTCGAACTTGTGCACCCGTTGCAGTCCTT...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAATTCTATGTCACCTTTTaGAGTTCGACATTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEFYVTF*SSTFFL
Trigger: CAGGAAGAATGTCGAACTGCAAAAGGTGACATAGAA...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGAAGTATGCTGACGTTTaGGCTGTGTCCTGCGTAAAG +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWKYADV*AVSCVK
Trigger: CTTTACGCAGGACACAGCGCAAACGTCAGCATACTT...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTGATGCCTGTGAATTATaGTCTATGTTGGACCGTGTT +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTDACEL*SMLDRV
Trigger: AACACGGTCCAACATAGAGCATAATTCACAGGCATC...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTCATTTTACGCACTCTaGCTGATCTGGATGTACCAA +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTSFYAL*LIWMYQ
Trigger: TTGGTACATCCAGATCAGGCAGAGTGCGTAAAATGA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGAGTAATTCCGAATTTTaGTCCCCCGGTCAAGGTCCC +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQSNSEF*SPGQGP
Trigger: GGGACCTTGACCGGGGGACCAAAATTCGGAATTACT...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTACAATTTTCCCGTCCTaGTACCAACCGTTGGAATTT +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTTIFPS*YQPLEF
Trigger: AAATTCCAACGGTTGGTACCAGGACGGGAAAATTGT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGCATTTGTGGGACAAATaGGGAACGTCGGGGTATAGT +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWHLWDK*GTSGYS
Trigger: ACTATACCCCGACGTTCCCCATTTGTCCCACAAATG...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGTCAAGCAGCACAGTGTaGGTGGGCCAACCTCATATT +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQSSSTV*VGQPHI
Trigger: AATATGAGGTTGGCCCACCCACACTGTGCTGCTTGA...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGACGTTTTCTGTACCGTaGCCTTCTCCTCTTCTGACT +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWTFSVP*PSPLLT
Trigger: AGTCAGAAGAGGAGAAGGCCACGGTACAGAAAACGT...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGGCACTCTGCCTGATCTaGATGTACCAAGATTCAGAG +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWALCLI*MYQDSE
Trigger: CTCTGAATCTTGGTACATCCAGATCAGGCAGAGTGC...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCGTATATGACAAAACCTaGACTGGTTATCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPVYDKT*TGYLEG
Trigger: GCCTTCTAGATAACCAGTCCAGGTTTTGTCATATAC...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTGTTTCCCTAGAACTTTaGGGGAAAAATCGATACCGT +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTVSLEL*GKNRYR
Trigger: ACGGTATCGATTTTTCCCCCAAAGTTCTAGGGAAAC...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAGCTGACCAGGCAAGGTaGCAATTCAAAATTAATACT +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEADQAR*QFKINT
Trigger: AGTATTAATTTTGAATTGCCACCTTGCCTGGTCAGC...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGTACACAGTAGACAGATaGCAAGTGCCCCAGAATTCT +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLYTVDR*QVPQNS
Trigger: AGAATTCTGGGGCACTTGTCATCTGTCTACTGTGTA...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAATGTACACCTGAATTTTaGCATGATGCCTGTGAATTA +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIECTPEF*HDACEL
Trigger: TAATTCACAGGCATCATGTCAAAATTCAGGTGTACA...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGCAAACTCTTGCTCCCTaGGATCCATTTTGTTCCATG +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLQTLAP*DPFCSM
Trigger: CATGGAACAAAATGGATCTCAGGGAGCAAGAGTTTG...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTAAGCTTTGGAGTTGTTaGATATTTGGCGAACATCCT +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTKLWSC*IFGEHP
Trigger: AGGATGTTCGCCAAATATTCAACAACTCCAAAGCTT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAATCTACTGAAACGTCCTaGAAACATGGTATCAAATTC +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIESTETS*KHGIKF
Trigger: GAATTTGATACCATGTTTTCAGGACGTTTCAGTAGA...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGTTTACGCACTCTGCCTaGTCTGGATGTACCAAGATT +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWFTHSA*SGCTKI
Trigger: AATCTTGGTACATCCAGATCAGGCAGAGTGCGTAAA...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGGTTCAGTACAAGTCATaGAAGTTTGGCCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLVQYKS*KFGLGR
Trigger: TCTTCCCAGGCCAAACTTTCATGACTTGTACTGAAC...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCAAGCCAAAGTATTATTaGTTTCAGGAATACAGGCAC +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPKPKYY*FQEYRH
Trigger: GTGCCTGTATTCCTGAAATCAATAATACTTTGGCTT...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGGCTGAGTTAAATATCTaGGCGCACAGTTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWAELNI*AHSCAE
Trigger: TTCTGCACAACTGTGCGCTCAGATATTTAACTCAGC...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAAAAGTATTAGAAGGCTaGGTTAAATATCTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEKVLEG*VKYLSA
Trigger: TGCGCTCAGATATTTAACTCAGCCTTCTAATACTTT...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTCAGCAAGAGTGCAATTaGTTCCAAACAACTTGGAAT +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTQQECN*FQTTWN
Trigger: ATTCCAAGTTGTTTGGAATCAATTGCACTCTTGCTG...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGTCCCGTAGCAGAGACTaGCGACCAACACCTAATAAT +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQSRSRD*RPTPNN
Trigger: ATTATTAGGTGTTGGTCGGCAGTCTCTGCTACGGGA...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGATACTGCCAAATTCTTaGCGTTCCATCTCGACTTCC +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLILPNS*RSISTS
Trigger: GGAAGTCGAGATGGAACGGCAAGAATTTGGCAGTAT...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAATTATTCCATCAAGAATaGTCTCATCTTGGTCATTGG +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIELFHQE*SHLGHW
Trigger: CCAATGACCAAGATGAGAGCATTCTTGATGGAATAA...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGAGGTCTTGTTCTCTCTaGAGCTCCCTGATTATTCCA +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWRSCSL*SSLIIP
Trigger: TGGAATAATCAGGGAGCTGCAGAGAGAACAAGACCT...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCATCTTAACAAACTCTTaGTCCCTGAGATCCATTTTG +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPILTNS*SLRSIL
Trigger: CAAAATGGATCTCAGGGAGCAAGAGTTTGTTAAGAT...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAAGAAAGAAACCTGAGTaGTACCCATATTCCACAAAA +
Preference number: 4 (lower is better)
Translates to: VCTPSSALKGFQMHEMIERKKPE*YPYSTK
Trigger: TTTTGTGGAATATGGGTAGCACTCAGGTTTCTTTCT...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGTACTCTTACAGTCTTTaGCATCCCGTAGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWYSYSL*HPVAET
Trigger: AGTCTCTGCTACGGGATGCCAAAGACTGTAAGAGTA...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGAAAGGCAGTTCCTTCTaGAATTGGCTCCATATCCCA +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWKGSSF*NWLHIP
Trigger: TGGGATATGGAGCCAATTCCAGAAGGAACTGCCTTT...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGTTGCTCCTGATGACCTaGGTAAGAAAGAAGATCAGC +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLLLLMT*VRKKIS
Trigger: GCTGATCTTCTTTCTTACCCAGGTCATCAGGAGCAA...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTGATACTGAGGTATTCTaGTCATTTTTAGGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTDTEVF*SFLGCN
Trigger: GTTGCAGCCTAAAAATGACCAGAATACCTCAGTATC...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGTATTCCGAAATGATTTaGCTTTCCCTGGGTCATGGC +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLYSEMI*LSLGHG
Trigger: GCCATGACCCAGGGAAAGCCAAATCATTTCGGAATA...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCCAAGTCATGAAAGTTTaGCCTGGGAAGAGTAAAATA +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPQVMKV*PGKSKI
Trigger: TATTTTACTCTTCCCAGGCCAAACTTTCATGACTTG...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGGTACTTGCTTTGCTATaGCTGGACCCAGATTTTACG +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLVLALL*LDPDFT
Trigger: CGTAAAATCTGGGTCCAGCCATAGCAAAGCAAGTAC...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGAGAGAGGCAAAAAGTTaGCAGACTGTCCTCCATACA +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLREAKS*QTVLHT
Trigger: TGTATGGAGGACAGTCTGCCAACTTTTTGCCTCTCT...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
3UTR CAA 72 bp GCTAGTAGGCTAGTGAATGTTTTAGAGAGCATCCTATaGCTGAAAGAGAAACACACAGTAAGCCATAGAAGA +
Preference number: 4 (lower is better)
Translates to: ASRLVNVLESIL*LKEKHTVSHRR
Trigger: TCTTCTATGGCTTACTGTGTGTTTCTCTTTCAGCAATAGGATGCTCTCTAAAACATTCACTAGCCTACTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGCCCATCATGACCTGCTaGAAGTATGATCCTTTGATC +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQPIMTC*KYDPLI
Trigger: GATCAAAGGATCATACTTTCAGCAGGTCATGATGGG...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGTGGAATTTTGTGGGATaGGGATTTCCATCAACATCC +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWWNFVG*GFPSTS
Trigger: GGATGTTGATGGAAATCCTCATCCCACAAAATTCCA...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGCATTATTTAGTTCATTaGCCACCACTCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWHYLVH*PPLFCS
Trigger: GGAGCAGAAGAGTGGTGGTCAATGAACTAAATAATG...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGCTTCACGTTCATAAATaGGGCTCAATAGTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWLHVHK*GSIVPC
Trigger: GCAAGGAACTATTGAGCCTCATTTATGAACGTGAAG...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGCCTGGCATGAGATACTaGGGTATTCTGGTCATTTTT +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLPGMRY*GILVIF
Trigger: AAAAATGACCAGAATACCTCAGTATCTCATGCCAGG...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGAACTCTATTCCGAAATaGTTTGGCTTTCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQNSIPK*FGFPWV
Trigger: GACCCAGGGAAAGCCAAATCATTTCGGAATAGAGTT...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGTGGTCATTGGTTTGCTaGCCAATTACCTGTTCTACT +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLWSLVC*PITCST
Trigger: AGTAGAACAGGTAATTGGGCAGCAAACCAATGACCA...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGTTCATTAGGCTCACCTaGTATAGAAACCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQFIRLT*YRNQSS
Trigger: GGAGGACTGGTTTCTATAGCAGGTGAGCCTAATGAA...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGTTCTGTATCCTCCTCTaGATCAGTACTGTTTCGTTC +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLFCILL*ISTVSF
Trigger: GAACGAAACAGTACTGATGCAGAGGAGGATACAGAA...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTACTACCATAGTTTCCTaGTTCCAAAGTTTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTTTIVS*FQSFFH
Trigger: GTGAAAGAAACTTTGGAAGCAGGAAACTATGGTAGT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCTACAGAAACAGAAATTaGTATTATCCCTCTTACCTC +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPYRNRN*YYPSYL
Trigger: GAGGTAAGAGGGATAATAGCAATTTCTGTTTCTGTA...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCGTTTATACATGTATATaGTCTCACGGGCCTAAATAT +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPVYTCI*SHGPKY
Trigger: ATATTTAGGCCCGTGAGAGCATATACATGTATAAAC...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGGATGAACAAGATATCTaGACTCCAGGTCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQDEQDI*TPGLDL
Trigger: GAGATCCAGACCTGGAGTCCAGATATCTTGTTCATC...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGTCTCATCTTGGTCATTaGTTTGCTGCCCAATTACCT +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLSHLGH*FAAQLP
Trigger: AGGTAATTGGGCAGCAAACCAATGACCAAGATGAGA...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCAACGTCCTGAAAACATaGTATCAAATTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPNVLKT*YQIHHL
Trigger: CAGATGATGAATTTGATACCATGTTTTCAGGACGTT...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTCAGAGGATCCTCAGTaGACACAAAATTGTCATTAT +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTSEDPQ*TQNCHY
Trigger: ATAATGACAATTTTGTGTCCACTGAGGATCCTCTGA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGATAATCCTCCCACCATaGCTTCCCAAAATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQIILPP*LPKMLR
Trigger: TCTCAGCATTTTGGGAAGCCATGGTGGGAGGATTAT...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGACCAGAACTGAAAGATaGACAAGATATCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQTRTER*TRYLDS
Trigger: GGAGTCCAGATATCTTGTTCATCTTTCAGTTCTGGT...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGTGTCCAGATAATGTATaGAGAAGCTGTCCTGTGATA +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWCPDNV*RSCPVI
Trigger: TATCACAGGACAGCTTCTTCATACATTATCTGGACA...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGGAAAGTATGATCCTTTaGTCAAATGGATGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWESMIL*SNGWAS
Trigger: AGAAGCCCATCCATTTGATCAAAGGATCATACTTTC...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGCTAACACCTTCAATTTaGCTACTATGTCTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLLTPSI*LLCLRS
Trigger: GCTTCGAAGACATAGTAGTCAAATTGAAGGTGTTAG...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGATATCAGTACAGCTCTaGTCCCCAATAAATCGAAGT +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWISVQL*SPINRS
Trigger: ACTTCGATTTATTGGGGATCAGAGCTGTACTGATAT...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGCTGACTCTGGATTGCTaGCTTATATTCAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWLTLDC*LIFRDD
Trigger: ATCATCTCTGAATATAAGTCAGCAATCCAGAGTCAG...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGCTTTCTCTTAAAGCCTaGACATCATTTCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLLSLKA*TSFPLQ
Trigger: TTGCAGTGGAAATGATGTTCAGGCTTTAAGAGAAAG...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGCGAGGAGCATTGTTATaGATTTGTCTAACACCTTCA +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWRGALL*ICLTPS
Trigger: TGAAGGTGTTAGACAAATGCATAACAATGCTCCTCG...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGGAAGAACTTTCACTTTaGCATTCAACAACAGGATCC +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLEELSL*HSTTGS
Trigger: GGATCCTGTTGTTGAATGGCAAAGTGAAAGTTCTTC...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGTTTCCTCATCAGAGCTaGTGCATATTTTACGTGTTG +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWFPHQS*CIFYVL
Trigger: CAACACGTAAAATATGCAGCAGCTCTGATGAGGAAA...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGAATCTATCACCAATCTaGCAGTTCCTTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLNLSPI*QFLSLA
Trigger: AGCCAAAGAAAGGAACTGGCAGATTGGTGATAGATT...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTATAATCGCAGCATCATaGTATAGATCCTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTIIAAS*YRSLTF
Trigger: AAAAGTCAAGGATCTATAGCATGATGCTGCGATTAT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGATCAAATTCATCATCTaGAATACGTGCTCGTTTGGC +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLIKFII*NTCSFG
Trigger: GCCAAACGAGCACGTATTGCAGATGATGAATTTGAT...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTACTGCAAGTGAAAACTaGTTAAAGATGTTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTTASEN*LKMLVQ
Trigger: TTGGACTAACATCTTTAAGCAGTTTTCACTTGCAGT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGCTTGTCTTCTCCAGATaGCAAATTATTGCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWLVFSR*QIIASH
Trigger: ATGACTGGCAATAATTTGCCATCTGGAGAAGACAAG...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGTCGAAGCCTGATGTTTaGGGAAGAAGATATGTCCAT +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQSKPDV*GRRYVH
Trigger: ATGGACATATCTTCTTCCCCAAACATCAGGCTTCGA...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTAATTATGCTCTATGTTaGACCGTGTTTGGTAAGTAT +
Preference number: 4 (lower is better)
Translates to: FILNLVECLPLGDKFWVTNYALC*TVFGKY
Trigger: ATACTTACCAAACACGGTCCAACATAGAGCATAATT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGGACCTGCTGAAAGTATaGTCCTTTGATCAAATGGAT +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQDLLKV*SFDQMD
Trigger: ATCCATTTGATCAAAGGATCATACTTTCAGCAGGTC...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR TCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGACATCCGGCATGTCATaGTACTTAATGGAAAAAGAT +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLTSGMS*YLMEKD
Trigger: ATCTTTTTCCATTAAGTATCATGACATGCCGGATGT...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGATTCTCCAGTCATTTTaGCTGAAATTGGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQILQSF*LKLGPE
Trigger: TTCTGGACCCAATTTCAGGCAAAATGACTGGAGAAT...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGCGTCATCTATTATACTaGGGAATCTATCACCAATCT +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWRHLLY*GIYHQS
Trigger: AGATTGGTGATAGATTCCGCAGTATAATAGATGACG...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGATAATGAACTGCTGCTaGTTCTTAGACGTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLIMNCC*FLDVFC
Trigger: ACAGAAAACGTCTAAGAAGCAGCAGCAGTTCATTAT...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGATTTTGTACTTGCTTTaGTATGGCTGGACCCAGATT +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQILYLL*YGWTQI
Trigger: AATCTGGGTCCAGCCATAGCAAAGCAAGTACAAAAT...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGAACTTAATTCTAAACTaGAGGGCCTTTCTACTGTAC +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWNLILN*RAFLLY
Trigger: GTACAGTAGAAAGGCCCTGCAGTTTAGAATTAAGTT...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGAGATATGTCCATGTTTaGACTTCTCAGAGCACCATT +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQRYVHV*TSQSTI
Trigger: AATGGTGCTCTGAGAAGTCCAAACATGGACATATCT...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGTTTGAATCTCTACTATaGTTTAAAGTGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLFESLL*FKVAAE
Trigger: CTCAGCTGCCACTTTAAACCATAGTAGAGATTCAAA...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGTGGTCATTTTTAGGCTaGAACTTCATTTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQWSFLG*NFICFC
Trigger: GCAGAAACAAATGAAGTTGCAGCCTAAAAATGACCA...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGAACTCTGTAAGAAGGTaGTATACTTCTGTGATACAA +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWNSVRR*YTSVIQ
Trigger: TTGTATCACAGAAGTATAGCACCTTCTTACAGAGTT...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGGTTACTTTGTTACTTTaGATCTGCGGGAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQVTLLL*ICGKQS
Trigger: ACTTTGTTTCCCGCAGATGCAAAGTAACAAAGTAAC...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGGTATCTGGTGACATATaGAAAAACACATTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQVSGDI*KNTFPN
Trigger: GTTGGGAAATGTGTTTTTGCATATGTCACCAGATAC...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGGCCAGTTCCTTTCTTTaGCTTCATTATAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWASSFL*LHYKTD
Trigger: ATCAGTTTTATAATGAAGCCAAAGAAAGGAACTGGC...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGAACAGAAGAACCCTTTaGAATGATATGAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQNRRTL*NDMSRI
Trigger: GATTCTGCTCATATCATTCCAAAGGGTTCTTCTGTT...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGATTTATTCCAGCATCTaGTGTCCAATCAGAATATTC +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQIYSSI*CPIRIF
Trigger: GAATATTCTGATTGGACAGCAGATGCTGGAATAAAT...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR GCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGAAAAATAGCTTGGTCTaGTGTCTAGTAACAGAAGTT +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQKNSLV*CLVTEV
Trigger: AACTTCTGTTACTAGACAGCAGACCAAGCTATTTTT...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGGTGATCTTGTTTAACTaGCAAAACTCTATTCCGAAA +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQVILFN*QNSIPK
Trigger: TTTCGGAATAGAGTTTTGCCAGTTAAACAAGATCAC...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CCA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGGTATACTGGCATAAATaGAAAAGCACCAATGTGAAA +
Preference number: 4 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQVYWHK*KSTNVK
Trigger: TTTCACATTGGTGCTTTTCCATTTATGCCAGTATAC...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS CCA 90 bp CACTCTCCTTCCTGGGGTTTGTATAGCAAAGCAGTCAATTCTTCCTaGGAGACAGGAACACCAGCACCAACTTCATCTGGAAAGGCAGTT +
Preference number: 5 (lower is better)
Translates to: HSPSWGLYSKAVNSS*ETGTPAPTSSGKAV
Trigger: AACTGCCTTTCCAGATGAAGTTGGTGCTGGTGTTCCTGTCTCCCAGGAAGAATTGACTGCTTTGCTATACAAACCCCAGGAAGGAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS CCA 90 bp TTCTCCCTCTTGCTCCTGATGACCTGGGTAAGAAAGAAGATCAGCTaGCTGTCGAAATGGCTCCGAGTCTTCACGTTCATAAATGAGGCT +
Preference number: 5 (lower is better)
Translates to: FSLLLLMTWVRKKIS*LSKWLRVFTFINEA
Trigger: AGCCTCATTTATGAACGTGAAGACTCGGAGCCATTTCGACAGCCAGCTGATCTTCTTTCTTACCCAGGTCATCAGGAGCAAGAGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS GCA 90 bp CCACATTTGGAGGTTTCACATAATTTACAGGTAGTTCTGGAGGTCTaGCTCTATGCAGAGCCGCAAAAGCAGACCCATTCCATAGTGTAC +
Preference number: 5 (lower is better)
Translates to: PHLEVSHNLQVVLEV*LYAEPQKQTHSIVY
Trigger: GTACACTATGGAATGGGTCTGCTTTTGCGGCTCTGCATAGAGGCAGACCTCCAGAACTACCTGTAAATTATGTGAAACCTCCAAATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000478415.1
CDS-3UTR CAA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAGCAATACGTGCTCGTTaGGCTCTGGTAGCTCCTCTA +
Preference number: 5 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEAIRAR*ALVAPL
Trigger: TAGAGGAGCTACCAGAGCCAAACGAGCACGTATTGC...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS CCA 90 bp ACTGGCAAAACTCTATTCCGAAATGATTTGGCTTTCCCTGGGTCATaGCTATTTCCACTTCGGCTATATCCACCGAAGCTCGATGAAGAA +
Preference number: 5 (lower is better)
Translates to: TGKTLFRNDLAFPGS*LFPLRLYPPKLDEE
Trigger: TTCTTCATCGAGCTTCGGTGGATATAGCCGAAGTGGAAATAGCCATGACCCAGGGAAAGCCAAATCATTTCGGAATAGAGTTTTGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS TCA 90 bp GCAGCATCTGAAACAGGAGATGAGAAAGGAGAGCTAGTCCTGGCATaGGATACTGAGGTATTCTGGTCATTTTTAGGCTGCAACTTCATT +
Preference number: 5 (lower is better)
Translates to: AASETGDEKGELVLA*DTEVFWSFLGCNFI
Trigger: AATGAAGTTGCAGCCTAAAAATGACCAGAATACCTCAGTATCTCATGCCAGGACTAGCTCTCCTTTCTCATCTCCTGTTTCAGATGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS CCA 90 bp CTGTTCTACTACCTCACCATCACCATTAGCCACATATCCCAGCTGTaGTATAAGCTGTTCATCTTTACAATTTTCCCGTCCTGGTACCAA +
Preference number: 5 (lower is better)
Translates to: LFYYLTITISHISQL*YKLFIFTIFPSWYQ
Trigger: TTGGTACCAGGACGGGAAAATTGTAAAGATGAACAGCTTATACCACAGCTGGGATATGTGGCTAATGGTGATGGTGAGGTAGTAGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTGTACTCTTACAGTCTTaGGCATCCCGTAGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: FILNLVECLPLGDKFWVTVLLQS*ASRSRD
Trigger: GTCTCTGCTACGGGATGCCAAAGACTGTAAGAGTAC...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAGATACTGCCAAATTCTaGCCGTTCCATCTCGACTTC +
Preference number: 5 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEDTAKF*PFHLDF
Trigger: GAAGTCGAGATGGAACGGCAAGAATTTGGCAGTATC...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCCATGAGGTGAGGAGCTaGTTGGGTTTGTTCATCCAA +
Preference number: 5 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPHEVRS*LGLFIQ
Trigger: TTGGATGAACAAACCCAACAAGCTCCTCACCTCATG...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCCTCTCATCTTGGTCATaGGTTTGCTGCCCAATTACC +
Preference number: 5 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPLSSWS*VCCPIT
Trigger: GGTAATTGGGCAGCAAACCAATGACCAAGATGAGAG...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTAAGCTCATCTCCCATTaGTGGGACAAATGGGGAACG +
Preference number: 5 (lower is better)
Translates to: FILNLVECLPLGDKFWVTKLISH*WDKWGT
Trigger: CGTTCCCCATTTGTCCCACAAATGGGAGATGAGCTT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAACTATTCCGAAATGATTaGGCTTTCCCTGGGTCATGG +
Preference number: 5 (lower is better)
Translates to: VCTPSSALKGFQMHEMIELFRND*AFPGSW
Trigger: CCATGACCCAGGGAAAGCCAAATCATTTCGGAATAG...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS GCA 90 bp GAAACCAGTCCTCCTTTCTTCTTTCTAGTCTGCTTAGGTTTCTTCTaGCTTTCTTCTAGGGACTTCAAATTTTCCTCATCAGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ETSPPFFFLVCLGFF*LSSRDFKFSSSELL
Trigger: CAGCAGCTCTGATGAGGAAAATTTGAAGTCCCTAGAAGAAAGGCAGAAGAAACCTAAGCAGACTAGAAAGAAGAAAGGAGGACTGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS-3UTR CAA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAACCAACCGTTGGAATTTaGTGGGATGAGGATTTCCAT +
Preference number: 5 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEPTVGI*WDEDFH
Trigger: ATGGAAATCCTCATCCCACAAAATTCCAACGGTTGG...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAGATTCTCCAGTCATTTaGCCTGAAATTGGGTCCAGA +
Preference number: 5 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEDSPVI*PEIGSR
Trigger: TCTGGACCCAATTTCAGGCAAAATGACTGGAGAATC...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGCAGTTCCTTCTGGAATaGGCTCCATATCCCATGGGC +
Preference number: 5 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLQFLLE*APYPMG
Trigger: GCCCATGGGATATGGAGCCAATTCCAGAAGGAACTG...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAATGTTTCCCTAGAACTTaGGGGGAAAAATCGATACCG +
Preference number: 5 (lower is better)
Translates to: VCTPSSALKGFQMHEMIECFPRT*GEKSIP
Trigger: CGGTATCGATTTTTCCCCCAAAGTTCTAGGGAAACA...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS TCA 90 bp ATCAAGGGAGTGATCTTGTTTAACTGGCAAAACTCTATTCCGAAATaGTTTGGCTTTCCCTGGGTCATGGCTATTTCCACTTCGGCTATA +
Preference number: 5 (lower is better)
Translates to: IKGVILFNWQNSIPK*FGFPWVMAISTSAI
Trigger: TATAGCCGAAGTGGAAATAGCCATGACCCAGGGAAAGCCAAATCATTTCGGAATAGAGTTTTGCCAGTTAAACAAGATCACTCCCTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS GCA 90 bp TTGGCGAACATCCTTATAAAATTCCAGAGGACTACCATAGTTTCCTaGTTCCAAAGTTTCTTTCACAGTGCTGAAGTCCACAGGAGTATC +
Preference number: 5 (lower is better)
Translates to: LANILIKFQRTTIVS*FQSFFHSAEVHRSI
Trigger: GATACTCCTGTGGACTTCAGCACTGTGAAAGAAACTTTGGAAGCAGGAAACTATGGTAGTCCTCTGGAATTTTATAAGGATGTTCGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCAAGATATGTCCATGTTaGGACTTCTCAGAGCACCAT +
Preference number: 5 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPKICPC*DFSEHH
Trigger: ATGGTGCTCTGAGAAGTCCAAACATGGACATATCTT...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCTCCCTGAGATCCATTTaGTTCCATGGCTGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPSLRSI*FHGCFC
Trigger: ACAAAAACAGCCATGGAACAAAATGGATCTCAGGGA...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGCTTTGCAGGCTGTTATaGAATGCACCAAGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLLCRLL*NAPSSP
Trigger: TGGGCTGCTTGGTGCATTCAATAACAGCCTGCAAAG...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAGATACAGTCCAGTCTTaGGCCAGCTTATTTATCTTG +
Preference number: 5 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEDTVQS*ASLFIL
Trigger: CAAGATAAATAAGCTGGCCAAAGACTGGACTGTATC...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS TCA 90 bp ATTTTAGTAGCCATGTCTAGCACTATACTCTTCCATTCTTGTTGCTaGTACTGCCAAATTCTTGCCGTTCCATCTCGACTTCCACTAACA +
Preference number: 5 (lower is better)
Translates to: ILVAMSSTILFHSCC*YCQILAVPSRLPLT
Trigger: TGTTAGTGGAAGTCGAGATGGAACGGCAAGAATTTGGCAGTATCAGCAACAAGAATGGAAGAGTATAGTGCTAGACATGGCTACTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS CCA 90 bp TCTAACACCTTCAATTTGACTACTATGTCTTCGAAGCCTGATGTTTaGGGAAGAAGATATGTCCATGTTTGGACTTCTCAGAGCACCATT +
Preference number: 5 (lower is better)
Translates to: SNTFNLTTMSSKPDV*GRRYVHVWTSQSTI
Trigger: AATGGTGCTCTGAGAAGTCCAAACATGGACATATCTTCTTCCCCAAACATCAGGCTTCGAAGACATAGTAGTCAAATTGAAGGTGTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373275.5
ENST00000473691.1
ENST00000497335.1
CDS CCA 90 bp ATTCAGAGTCAGAGTCAGAACCACAGGTACTTTCAGAACTTAAACTaGATCCTAACTCTCCACTCTCTGAGGTGGATAAATGAGATTTCT +
Preference number: 5 (lower is better)
Translates to: IQSQSQNHRYFQNLN*ILTLHSLRWINEIS
Trigger: AGAAATCTCATTTATCCACCTCAGAGAGTGGAGAGTTAGGATCCAGTTTAAGTTCTGAAAGTACCTGTGGTTCTGACTCTGACTCTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGCACCGCACCATGGCCTaGGCCTTCAATCATGTTAAA +
Preference number: 5 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQHRTMA*AFNHVK
Trigger: TTTAACATGATTGAAGGCCAAGGCCATGGTGCGGTG...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGGAGGTGAGGAGCTTGTaGGGTTTGTTCATCCAATAC +
Preference number: 5 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWEVRSL*GLFIQY
Trigger: GTATTGGATGAACAAACCCAACAAGCTCCTCACCTC...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGTCCTGGTACCAACCGTaGGAATTTTGTGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQSWYQP*EFCGMR
Trigger: CCTCATCCCACAAAATTCCAACGGTTGGTACCAGGA...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTATGTTGGACCGTGTTaGGTAAGTATGCTGACGTTT +
Preference number: 5 (lower is better)
Translates to: FILNLVECLPLGDKFWVTYVGPC*VSMLTF
Trigger: AAACGTCAGCATACTTACCAAACACGGTCCAACATA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTGGAAGAACTTTCACTTaGCCATTCAACAACAGGATC +
Preference number: 5 (lower is better)
Translates to: FILNLVECLPLGDKFWVTGRTFT*PFNNRI
Trigger: GATCCTGTTGTTGAATGGCAAAGTGAAAGTTCTTCC...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAATCAAGGGAGTGATCTaGTTTAACTGGCAAAACTCT +
Preference number: 5 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEIKGVI*FNWQNS
Trigger: AGAGTTTTGCCAGTTAAACAAGATCACTCCCTTGAT...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAATGTTGACAAATGCTTaGCAGGCTGTTATTGAATGC +
Preference number: 5 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEMLTNA*QAVIEC
Trigger: GCATTCAATAACAGCCTGCAAAGCATTTGTCAACAT...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS CCA 90 bp ATTTGCTATAATCATGGTCTCCATCTACGTAATCTTGATCTGTTCTaGAAGTTGATTCAGAGTCAGAGTCAGAACCACAGGTACTTTCAG +
Preference number: 5 (lower is better)
Translates to: ICYNHGLHLRNLDLF*KLIQSQSQNHRYFQ
Trigger: CTGAAAGTACCTGTGGTTCTGACTCTGACTCTGAATCAACTTCCAGAACAGATCAAGATTACGTAGATGGAGACCATGATTATAGCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGATCTTGGTCATTGGTTaGCTGCCCAATTACCTGTTC +
Preference number: 5 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWILVIG*LPNYLF
Trigger: GAACAGGTAATTGGGCAGCAAACCAATGACCAAGAT...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GGGTTAGCATTTAAAACAATGGACTTTACATGTCGAAAGTTCCATCCCTTCCCCTGCATATTTTACGTGTaGTCTGTCTGGTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: GLAFKTMDFTCRKFHPFPCIFYV*SVWFVF
Trigger: AAAGACAAACCAGACAGACAACACGTAAAATATGCA...GGGGAAGGGATGGAACTTTCGACATGTAAAGTCCATTGTTTTAAATGCTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAAATAAGCTTCATGTCCTaGCCTAAAATAGATAAGCTC +
Preference number: 5 (lower is better)
Translates to: VCTPSSALKGFQMHEMIEISFMS*PKIDKL
Trigger: GAGCTTATCTATTTTAGGCAAGGACATGAAGCTTAT...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGATCAGGATACTCTGGTaGAAAAGGCTGCTGACTCTC +
Preference number: 5 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQIRILW*KRLLTL
Trigger: GAGAGTCAGCAGCCTTTTCAACCAGAGTATCCTGAT...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGTCTCCTTCCTGGGGTTaGTATAGCAAAGCAGTCAAT +
Preference number: 5 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLSPSWG*YSKAVN
Trigger: ATTGACTGCTTTGCTATACAAACCCCAGGAAGGAGA...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGCTTCTGCCTCGGCATTaGACCTTTCTTCCAGATGAA +
Preference number: 5 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQLLPRH*TFLPDE
Trigger: TTCATCTGGAAGAAAGGTCAAATGCCGAGGCAGAAG...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGGATCTGTTCTGGAAGTaGATTCAGAGTCAGAGTCAG +
Preference number: 5 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWDLFWK*IQSQSQ
Trigger: CTGACTCTGACTCTGAATCAACTTCCAGAACAGATC...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTGTGTACGCCTTCCTCTGCACTTAAGGGTTTTCAGATGCATGAAATGATTGAATCATTCCTACTAAGCTaGTTCTATTTCTCCTTAGTC +
Preference number: 5 (lower is better)
Translates to: VCTPSSALKGFQMHEMIESFLLS*FYFSLV
Trigger: GACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGA...TTCAATCATTTCATGCATCTGAAAACCCTTAAGTGCAGAGGAAGGCGTACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGCATTTTGTACTTGCTTaGCTATGGCTGGACCCAGAT +
Preference number: 5 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLHFVLA*LWLDPD
Trigger: ATCTGGGTCCAGCCATAGCAAAGCAAGTACAAAATG...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTAGTTACTTTGTTACTTaGCATCTGCGGGAAACAAAG +
Preference number: 5 (lower is better)
Translates to: FILNLVECLPLGDKFWVTSYFVT*HLRETK
Trigger: CTTTGTTTCCCGCAGATGCAAAGTAACAAAGTAACT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTTTTACTCAGTTACTTaGTTACTTTGCATCTGCGGG +
Preference number: 5 (lower is better)
Translates to: FILNLVECLPLGDKFWVTFYSVT*LLCICG
Trigger: CCCGCAGATGCAAAGTAACAAAGTAACTGAGTAAAA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTGCCAGCTTATTTATCTaGAACCTAGTGGAATGTTTG +
Preference number: 5 (lower is better)
Translates to: FILNLVECLPLGDKFWVTASLFI*NLVECL
Trigger: CAAACATTCCACTAGGTTCAAGATAAATAAGCTGGC...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS CCA 90 bp GCACTCTGCCTGATCTGGATGTACCAAGATTCAGAGGATCCTCAGTaGACACAAAATTGTCATTATCAGAATCATCATTATATAAAACAG +
Preference number: 5 (lower is better)
Translates to: ALCLIWMYQDSEDPQ*TQNCHYQNHHYIKQ
Trigger: CTGTTTTATATAATGATGATTCTGATAATGACAATTTTGTGTCCACTGAGGATCCTCTGAATCTTGGTACATCCAGATCAGGCAGAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTTCTAACACCTTCAATTaGACTACTATGTCTTCGAAG +
Preference number: 5 (lower is better)
Translates to: FILNLVECLPLGDKFWVTSNTFN*TTMSSK
Trigger: CTTCGAAGACATAGTAGTCAAATTGAAGGTGTTAGA...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGTCATTTTGCCTGAAATaGGGTCCAGAAATGCAAGCT +
Preference number: 5 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWSFCLK*GPEMQA
Trigger: AGCTTGCATTTCTGGACCCAATTTCAGGCAAAATGA...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGGGAGTAAAACTGACCTaGGAACTCAAGCTCACTTAT +
Preference number: 5 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLGVKLT*ELKLTY
Trigger: ATAAGTGAGCTTGAGTTCCAAGGTCAGTTTTACTCC...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGTATCTGAGCGCACAGTaGTGCAGAATGAGATTTCTA +
Preference number: 5 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLYLSAQ*CRMRFL
Trigger: TAGAAATCTCATTCTGCACAACTGTGCGCTCAGATA...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGGCAGCAAGAGTGCAATaGATTCCAAACAACTTGGAA +
Preference number: 5 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWAARVQ*IPNNLE
Trigger: TTCCAAGTTGTTTGGAATCAATTGCACTCTTGCTGC...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGAACCTAGTGGAATGTTaGCCACTGGGAGACAAATTC +
Preference number: 5 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQNLVEC*PLGDKF
Trigger: GAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTT...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGGAGAGCACCTTTTTCTaGACCTTCTCAACTTGGAAA +
Preference number: 5 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLESTFF*TFSTWK
Trigger: TTTCCAAGTTGAGAAGGTCAAGAAAAAGGTGCTCTC...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp TTTATCTTGAACCTAGTGGAATGTTTGCCACTGGGAGACAAATTCTGGGTAACTACTTCATTAAGGCAATaGTCACAGATGGCAAAGAAA +
Preference number: 5 (lower is better)
Translates to: FILNLVECLPLGDKFWVTTSLRQ*SQMAKK
Trigger: TTTCTTTGCCATCTGTGACAATTGCCTTAATGAAGT...AGTTACCCAGAATTTGTCTCCCAGTGGCAAACATTCCACTAGGTTCAAGATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGACTCTTCCATTCTTGTaGCTGATACTGCCAAATTCT +
Preference number: 5 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLTLPFL*LILPNS
Trigger: AGAATTTGGCAGTATCAGCAACAAGAATGGAAGAGT...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGCCAGATGGCAAATTATaGCCAGTCATTTTAGTAGCC +
Preference number: 5 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQPDGKL*PVILVA
Trigger: GGCTACTAAAATGACTGGCAATAATTTGCCATCTGG...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGAGGAGCTTGTTGGGTTaGTTCATCCAATACATAGTT +
Preference number: 5 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLRSLLG*FIQYIV
Trigger: AACTATGTATTGGATGAACAAACCCAACAAGCTCCT...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGGGGCCAACCTCATATTaGATTCCTACAATCTTAACA +
Preference number: 5 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLGPTSY*IPTILT
Trigger: TGTTAAGATTGTAGGAATCAAATATGAGGTTGGCCC...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGTCTTCTGACTCTGGATaGCTGACTTATATTCAGAGA +
Preference number: 5 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLSSDSG*LTYIQR
Trigger: TCTCTGAATATAAGTCAGCAATCCAGAGTCAGAAGA...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGTATACTCTTCCATTCTaGTTGCTGATACTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWYTLPF*LLILPN
Trigger: ATTTGGCAGTATCAGCAACAAGAATGGAAGAGTATA...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGTTAAGTTTAGTGATCTaGTCTTCTCCAGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLLSLVI*SSPDGK
Trigger: TTTGCCATCTGGAGAAGACAAGATCACTAAACTTAA...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGCTCATAATCATTCCTTaGAGTAGTGTAAGATGGCTT +
Preference number: 5 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLLIIIP*SSVRWL
Trigger: AAGCCATCTTACACTACTCAAAGGAATGATTATGAG...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp CTATCCCACCAAAAATCTCATTCAAAAGATCAACTCACAGGCTCAATATATTGGAATCTTAACAAACTCTaGCTCCCTGAGATCCATTTT +
Preference number: 5 (lower is better)
Translates to: LSHQKSHSKDQLTGSIYWNLNKL*LPEIHF
Trigger: AAAATGGATCTCAGGGAGCAAGAGTTTGTTAAGATT...CCAATATATTGAGCCTGTGAGTTGATCTTTTGAATGAGATTTTTGGTGGGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp GTAGTTTCAAATAGGAACGTTTTGAATCTCTACTATGGTTTAAAGTGGCAGCTGTGGAGATCAAAAGTCTaGAAACAAATGTATACTGGC +
Preference number: 5 (lower is better)
Translates to: VVSNRNVLNLYYGLKWQLWRSKV*KQMYTG
Trigger: GCCAGTATACATTTGTTTCAAGACTTTTGATCTCCA...CAGCTGCCACTTTAAACCATAGTAGAGATTCAAAACGTTCCTATTTGAAACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS-3UTR CAA 90 bp ATAACTTATGGGGTATTCATTCCTACTAAGCTTGTTCTATTTCTCCTTAGTCAGGTCTGGTTTGTCTTTTaGGGGGTTGTAAATTTATTC +
Preference number: 5 (lower is better)
Translates to: ITYGVFIPTKLVLFLLSQVWFVF*GVVNLF
Trigger: GAATAAATTTACAACCCCCAAAAAGACAAACCAGAC...CTGACTAAGGAGAAATAGAACAAGCTTAGTAGGAATGAATACCCCATAAGTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS GCA 72 bp GATCAGGTAATACAGCTCGGCTTCGATCTGGGTAGGTaGTGCCGCCATCCTTTTCCCGAGGGGGTTTGGGGG +
Preference number: 6 (lower is better)
Translates to: DQVIQLGFDLGR*CRHPFPEGVWG
Trigger: CCCCCAAACCCCCTCGGGAAAAGGATGGCGGCAGCACCTACCCAGATCGAAGCCGAGCTGTATTACCTGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000478415.1
CDS GCA 72 bp GCATTTGCTGCCACCAGATCCTCGAAGCTTCTTCGGTaGTCTTTCCCCTCCCAATCTAAGCGGCGCGGAATC +
Preference number: 6 (lower is better)
Translates to: AFAATRSSKLLR*SFPSQSKRRGI
Trigger: GATTCCGCGCCGCTTAGATTGGGAGGGGAAAGAGCACCGAAGAAGCTTCGAGGATCTGGTGGCAGCAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000478415.1
CDS GCA 72 bp GTACTCTTACAGTCTTTGGCATCCCGTAGCAGAGACTaGCGACCAACACCTAATAATGTCTGTACCCCAGGA +
Preference number: 6 (lower is better)
Translates to: VLLQSLASRSRD*RPTPNNVCTPG
Trigger: TCCTGGGGTACAGACATTATTAGGTGTTGGTCGGCAGTCTCTGCTACGGGATGCCAAAGACTGTAAGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000478415.1
CDS CCA 72 bp CTGCTCCACGCCATGAGATCTCTTTCAGTGGCCATCTaGCTCCGAGGAGCATTGTTATGCATTTGTCTAACA +
Preference number: 6 (lower is better)
Translates to: LLHAMRSLSVAI*LRGALLCICLT
Trigger: TGTTAGACAAATGCATAACAATGCTCCTCGGAGCCAGATGGCCACTGAAAGAGATCTCATGGCGTGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373275.5
ENST00000473691.1
ENST00000497335.1
CDS CCA 72 bp TCCTGGGGTTTGTATAGCAAAGCAGTCAATTCTTCCTaGGAGACAGGAACACCAGCACCAACTTCATCTGGA +
Preference number: 6 (lower is better)
Translates to: SWGLYSKAVNSS*ETGTPAPTSSG
Trigger: TCCAGATGAAGTTGGTGCTGGTGTTCCTGTCTCCCAGGAAGAATTGACTGCTTTGCTATACAAACCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS CCA 72 bp TTGCTCCTGATGACCTGGGTAAGAAAGAAGATCAGCTaGCTGTCGAAATGGCTCCGAGTCTTCACGTTCATA +
Preference number: 6 (lower is better)
Translates to: LLLMTWVRKKIS*LSKWLRVFTFI
Trigger: TATGAACGTGAAGACTCGGAGCCATTTCGACAGCCAGCTGATCTTCTTTCTTACCCAGGTCATCAGGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS GCA 72 bp CTCACAAATTTTAAGGAGGTAGTCTGGAGGAATGTGTaGATTTGCTGCCACCAGATCCTCGAAGCTTCTTCG +
Preference number: 6 (lower is better)
Translates to: LTNFKEVVWRNV*ICCHQILEASS
Trigger: CGAAGAAGCTTCGAGGATCTGGTGGCAGCAAATGCACACATTCCTCCAGACTACCTCCTTAAAATTTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000478415.1
CDS CCA 72 bp ACCTGGGTAAGAAAGAAGATCAGCTGGCTGTCGAAATaGCTCCGAGTCTTCACGTTCATAAATGAGGCTCAA +
Preference number: 6 (lower is better)
Translates to: TWVRKKISWLSK*LRVFTFINEAQ
Trigger: TTGAGCCTCATTTATGAACGTGAAGACTCGGAGCCATTTCGACAGCCAGCTGATCTTCTTTCTTACCCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS CCA 72 bp ACTCTATTCCGAAATGATTTGGCTTTCCCTGGGTCATaGCTATTTCCACTTCGGCTATATCCACCGAAGCTC +
Preference number: 6 (lower is better)
Translates to: TLFRNDLAFPGS*LFPLRLYPPKL
Trigger: GAGCTTCGGTGGATATAGCCGAAGTGGAAATAGCCATGACCCAGGGAAAGCCAAATCATTTCGGAATAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS CAA 90 bp TGCAGCTCCCTGATTATTCCATCAAGAATGCTCTCATCTTGGTCATaGGTTTGCTGCCCAATTACCTGTTCTACTACCTCACCATCACCA +
Preference number: 6 (lower is better)
Translates to: CSSLIIPSRMLSSWS*VCCPITCSTTSPSP
Trigger: TGGTGATGGTGAGGTAGTAGAACAGGTAATTGGGCAGCAAACCAATGACCAAGATGAGAGCATTCTTGATGGAATAATCAGGGAGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS GCA 72 bp CCACTGAGGGGCAAACCATTCTTCATTAGGCTCACCTaGTATAGAAACCAGTCCTCCTTTCTTCTTTCTAGT +
Preference number: 6 (lower is better)
Translates to: PLRGKPFFIRLT*YRNQSSFLLSS
Trigger: ACTAGAAAGAAGAAAGGAGGACTGGTTTCTATAGCAGGTGAGCCTAATGAAGAATGGTTTGCCCCTCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS CCA 72 bp GTCCAGAAATGCAAGCTTCAAGCAGCACAGTGTGGGTaGGCCAACCTCATATTTGATTCCTACAATCTTAAC +
Preference number: 6 (lower is better)
Translates to: VQKCKLQAAQCG*ANLIFDSYNLN
Trigger: GTTAAGATTGTAGGAATCAAATATGAGGTTGGCCCACCCACACTGTGCTGCTTGAAGCTTGCATTTCTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS CCA 72 bp TGGCTTTTTCTGTCATTTTACGCACTCTGCCTGATCTaGATGTACCAAGATTCAGAGGATCCTCAGTGGACA +
Preference number: 6 (lower is better)
Translates to: WLFLSFYALCLI*MYQDSEDPQWT
Trigger: TGTCCACTGAGGATCCTCTGAATCTTGGTACATCCAGATCAGGCAGAGTGCGTAAAATGACAGAAAAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS CAA 72 bp ATGGTATCAAATTCATCATCTGCAATACGTGCTCGTTaGGCTCTGGTAGCTCCTCTAGAAGCACCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: MVSNSSSAIRAR*ALVAPLEAPLP
Trigger: AGGAAGAGGTGCTTCTAGAGGAGCTACCAGAGCCAAACGAGCACGTATTGCAGATGATGAATTTGATACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS CAA 72 bp CTCAGAAAGGACGACCTGATAGGCTATGGTTACTACTaGGATGAGATTGTGGAAGTGATGGCTAAGGATGTC +
Preference number: 6 (lower is better)
Translates to: LRKDDLIGYGYY*DEIVEVMAKDV
Trigger: GACATCCTTAGCCATCACTTCCACAATCTCATCCAAGTAGTAACCATAGCCTATCAGGTCGTCCTTTCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487313.1
CDS CAA 90 bp CTCCCTGATTATTCCATCAAGAATGCTCTCATCTTGGTCATTGGTTaGCTGCCCAATTACCTGTTCTACTACCTCACCATCACCATTAGC +
Preference number: 6 (lower is better)
Translates to: LPDYSIKNALILVIG*LPNYLFYYLTITIS
Trigger: GCTAATGGTGATGGTGAGGTAGTAGAACAGGTAATTGGGCAGCAAACCAATGACCAAGATGAGAGCATTCTTGATGGAATAATCAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS CAA 90 bp AATGCAAGCTTCAAGCAGCACAGTGTGGGTGGGCCAACCTCATATTaGATTCCTACAATCTTAACAAACTCTTGCTCCCTGAGATCCATT +
Preference number: 6 (lower is better)
Translates to: NASFKQHSVGGPTSY*IPTILTNSCSLRSI
Trigger: AATGGATCTCAGGGAGCAAGAGTTTGTTAAGATTGTAGGAATCAAATATGAGGTTGGCCCACCCACACTGTGCTGCTTGAAGCTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS TCA 72 bp GCCATGTCTAGCACTATACTCTTCCATTCTTGTTGCTaGTACTGCCAAATTCTTGCCGTTCCATCTCGACTT +
Preference number: 6 (lower is better)
Translates to: AMSSTILFHSCC*YCQILAVPSRL
Trigger: AAGTCGAGATGGAACGGCAAGAATTTGGCAGTATCAGCAACAAGAATGGAAGAGTATAGTGCTAGACATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS CCA 72 bp AAAATAGATAAGCTCATCTCCCATTTGTGGGACAAATaGGGAACGTCGGGGTATAGTATCCAAGATCCACTG +
Preference number: 6 (lower is better)
Translates to: KIDKLISHLWDK*GTSGYSIQDPL
Trigger: CAGTGGATCTTGGATACTATACCCCGACGTTCCCCATTTGTCCCACAAATGGGAGATGAGCTTATCTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS CAA 90 bp AAGAAAGCACTCAGAAAGGACGACCTGATAGGCTATGGTTACTACTaGGATGAGATTGTGGAAGTGATGGCTAAGGATGTCATCAAAGAC +
Preference number: 6 (lower is better)
Translates to: KKALRKDDLIGYGYY*DEIVEVMAKDVIKD
Trigger: GTCTTTGATGACATCCTTAGCCATCACTTCCACAATCTCATCCAAGTAGTAACCATAGCCTATCAGGTCGTCCTTTCTGAGTGCTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487313.1
CDS TCA 72 bp GTCTCCATCTACGTAATCTTGATCTGTTCTGGAAGTTaGTTCAGAGTCAGAGTCAGAACCACAGGTACTTTC +
Preference number: 6 (lower is better)
Translates to: VSIYVILICSGS*FRVRVRTTGTF
Trigger: GAAAGTACCTGTGGTTCTGACTCTGACTCTGAATCAACTTCCAGAACAGATCAAGATTACGTAGATGGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS CCA 72 bp AATCATGGTCTCCATCTACGTAATCTTGATCTGTTCTaGAAGTTGATTCAGAGTCAGAGTCAGAACCACAGG +
Preference number: 6 (lower is better)
Translates to: NHGLHLRNLDLF*KLIQSQSQNHR
Trigger: CCTGTGGTTCTGACTCTGACTCTGAATCAACTTCCAGAACAGATCAAGATTACGTAGATGGAGACCATGATT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS CAA 72 bp TCTTGTTTAACTGGCAAAACTCTATTCCGAAATGATTaGGCTTTCCCTGGGTCATGGCTATTTCCACTTCGG +
Preference number: 6 (lower is better)
Translates to: SCLTGKTLFRND*AFPGSWLFPLR
Trigger: CCGAAGTGGAAATAGCCATGACCCAGGGAAAGCCAAATCATTTCGGAATAGAGTTTTGCCAGTTAAACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS CAA 72 bp GGTCTCCATCTACGTAATCTTGATCTGTTCTGGAAGTaGATTCAGAGTCAGAGTCAGAACCACAGGTACTTT +
Preference number: 6 (lower is better)
Translates to: GLHLRNLDLFWK*IQSQSQNHRYF
Trigger: AAAGTACCTGTGGTTCTGACTCTGACTCTGAATCAACTTCCAGAACAGATCAAGATTACGTAGATGGAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS CAA 90 bp AATGTTACCTTATTGACTCACCTACTAACCCCATTATTTAGTTCATaGACCACCACTCTTCTGCTCCACGCCATGAGATCTCTTTCAGTG +
Preference number: 6 (lower is better)
Translates to: NVTLLTHLLTPLFSS*TTTLLLHAMRSLSV
Trigger: CACTGAAAGAGATCTCATGGCGTGGAGCAGAAGAGTGGTGGTCAATGAACTAAATAATGGGGTTAGTAGGTGAGTCAATAAGGTAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497335.1
CDS TCA 72 bp AATTCTCTTATGCATCTTAATGTGCTGGTAAGCAGATaGAGGGAAAATATGACCAAAGCGACTACAGCCGGT +
Preference number: 6 (lower is better)
Translates to: NSLMHLNVLVSR*RENMTKATTAG
Trigger: ACCGGCTGTAGTCGCTTTGGTCATATTTTCCCTTCATCTGCTTACCAGCACATTAAGATGCATAAGAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000478415.1
CDS TCA 72 bp GAAGAACTGTCTGAGTCTTCCTGTACACCTGAATTTTaGCATGATGCCTGTGAATTATGCTCTATGTTGGAC +
Preference number: 6 (lower is better)
Translates to: EELSESSCTPEF*HDACELCSMLD
Trigger: GTCCAACATAGAGCATAATTCACAGGCATCATGTCAAAATTCAGGTGTACAGGAAGACTCAGACAGTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS TCA 72 bp GTGATCTTGTTTAACTGGCAAAACTCTATTCCGAAATaGTTTGGCTTTCCCTGGGTCATGGCTATTTCCACT +
Preference number: 6 (lower is better)
Translates to: VILFNWQNSIPK*FGFPWVMAIST
Trigger: AGTGGAAATAGCCATGACCCAGGGAAAGCCAAATCATTTCGGAATAGAGTTTTGCCAGTTAAACAAGATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS TCA 72 bp AAGGTCCCAAATAAAAATGTTCCCATCATGACCTGCTaGAAGTATGATCCTTTGATCAAATGGATGGGCTTC +
Preference number: 6 (lower is better)
Translates to: KVPNKNVPIMTC*KYDPLIKWMGF
Trigger: GAAGCCCATCCATTTGATCAAAGGATCATACTTTCAGCAGGTCATGATGGGAACATTTTTATTTGGGACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS GCA 72 bp TTCAACTGTATAAAGACTGATTTCTATGTCACCTTTTaGAGTTCGACATTCTTCCTGTACCCTACTAACCCC +
Preference number: 6 (lower is better)
Translates to: FNCIKTDFYVTF*SSTFFLYPTNP
Trigger: GGGGTTAGTAGGGTACAGGAAGAATGTCGAACTGCAAAAGGTGACATAGAAATCAGTCTTTATACAGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS GCA 72 bp TTTCTTCTAGGGACTTCAAATTTTCCTCATCAGAGCTaGTGCATATTTTACGTGTTGTCTGTCTGGTTTGTC +
Preference number: 6 (lower is better)
Translates to: FLLGTSNFPHQS*CIFYVLSVWFV
Trigger: GACAAACCAGACAGACAACACGTAAAATATGCAGCAGCTCTGATGAGGAAAATTTGAAGTCCCTAGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS CCA 72 bp TTCAATTTGACTACTATGTCTTCGAAGCCTGATGTTTaGGGAAGAAGATATGTCCATGTTTGGACTTCTCAG +
Preference number: 6 (lower is better)
Translates to: FNLTTMSSKPDV*GRRYVHVWTSQ
Trigger: CTGAGAAGTCCAAACATGGACATATCTTCTTCCCCAAACATCAGGCTTCGAAGACATAGTAGTCAAATTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373275.5
ENST00000473691.1
ENST00000497335.1
CDS CCA 72 bp TGCGGAATCTATCACCAATCTGCCAGTTCCTTTCTTTaGCTTCATTATAAAACTGATGTAGCACAAGGAAGT +
Preference number: 6 (lower is better)
Translates to: CGIYHQSASSFL*LHYKTDVAQGS
Trigger: ACTTCCTTGTGCTACATCAGTTTTATAATGAAGCCAAAGAAAGGAACTGGCAGATTGGTGATAGATTCCGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373275.5
ENST00000473691.1
CDS CAA 90 bp TATAATCATGGTCTCCATCTACGTAATCTTGATCTGTTCTGGAAGTaGATTCAGAGTCAGAGTCAGAACCACAGGTACTTTCAGAACTTA +
Preference number: 6 (lower is better)
Translates to: YNHGLHLRNLDLFWK*IQSQSQNHRYFQNL
Trigger: TAAGTTCTGAAAGTACCTGTGGTTCTGACTCTGACTCTGAATCAACTTCCAGAACAGATCAAGATTACGTAGATGGAGACCATGATTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS TCA 72 bp CTAACAAATCTTAAACTGTCTCCATTGTTACAGAACTaGACAGCAACAACTTTATCCGTATGTGACTCTAAT +
Preference number: 6 (lower is better)
Translates to: LTNLKLSPLLQN*TATTLSVCDSN
Trigger: ATTAGAGTCACATACGGATAAAGTTGTTGCTGTTCAGTTCTGTAACAATGGAGACAGTTTAAGATTTGTTAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS TCA 72 bp GTATTACATAATTACCTGTCTCCATTGTTACAGAACTaGACAGCAACAACTTTATCCGTATGTGACTCTAAT +
Preference number: 6 (lower is better)
Translates to: VLHNYLSPLLQN*TATTLSVCDSN
Trigger: ATTAGAGTCACATACGGATAAAGTTGTTGCTGTTCAGTTCTGTAACAATGGAGACAGGTAATTATGTAATAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487313.1
CDS CAA 72 bp TTTATTAGAGGTATAAGCTTTGGAGTTGTTGAATATTaGGCGAACATCCTTATAAAATTCCAGAGGACTACC +
Preference number: 6 (lower is better)
Translates to: FIRGISFGVVEY*ANILIKFQRTT
Trigger: GGTAGTCCTCTGGAATTTTATAAGGATGTTCGCCAAATATTCAACAACTCCAAAGCTTATACCTCTAATAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373275.5
CDS CAA 72 bp CAAAGCATTCAGCACAAAGCTGAAGATGATCATTATTaGTTACGAAGTGAACTCACTGGAATAATATGGAAA +
Preference number: 6 (lower is better)
Translates to: QSIQHKAEDDHY*LRSELTGIIWK
Trigger: TTTCCATATTATTCCAGTGAGTTCACTTCGTAACAAATAATGATCATCTTCAGCTTTGTGCTGAATGCTTTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497335.1