Pregenerated sensors for BRS3 (Homo sapiens)
Ensembl gene IDs: ENSG00000102239Ensembl transcript IDs: ENST00000370648.4
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATGATAACTTAGCCCAGTTATTAATCCATGGCAGTTGTAAGTGTTaGCCCAGTAAGGCAAGCACTGTGCCCCAGATCCTTACTCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: NDNLAQLLIHGSCKC*PSKASTVPQILTQC Trigger: GCACTGAGTAAGGATCTGGGGCACAGTGCTTGCCTTACTGGGTCAACACTTACAACTGCCATGGATTAATAACTGGGCTAAGTTATCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| 3UTR GCA 90 bp | TTTCAACACACTTTTCAAACAACAAAAATCTGGACACCATACACCTaGACACAGCTTAGAGTCGGATACACACGCTGGGAGGAGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: FQHTFQTTKIWTPYT*TQLRVGYTRWEEKQ Trigger: CTGCTTCTCCTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGTATGGTGTCCAGATTTTTGTTGTTTGAAAAGTGTGTTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| 3UTR TCA 90 bp | CTTAGGCACCCATTGGGTTTAATAAAGTCAAGCAGGAAGATGATCTaGTCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACT | + |
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Preference number: 1 (lower is better) Translates to: LRHPLGLIKSSRKMI*SQLHTQGLGISYGT Trigger: AGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGATCAGATCATCTTCCTGCTTGACTTTATTAAACCCAATGGGTGCCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| 3UTR-3UTR GCA 90 bp | ATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCTGCATGTTTTGGACACCATACACCTaGACACAGCTTAGAGTCGGA | + |
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Preference number: 2 (lower is better) Translates to: ITIAHPGVRDFIWYFCMFWTPYT*TQLRVG Trigger: TCCGACTCTAAGCTGTGTGCAGGTGTATGGTGTCCA...AAACATGCAGAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAATTTCAGACACTGTGGCAGGTTTGCAGATTTTTCAACAGAGGTCCTCAAAGTCGGATACACACGCTaGGAGGAGAAGCAGCATTTT | + |
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Preference number: 2 (lower is better) Translates to: KNFRHCGRFADFSTEVLKVGYTR*EEKQHF Trigger: AAAATGCTGCTTCTCCTCCCAGCGTGTGTATCCGAC...TTTGAGGACCTCTGTTGAAAAATCTGCAAACCTGCCACAGTGTCTGAAATTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCAAAAATTTTTCTGAAACCACAGGTCTAAATCTGACACGTCTATTGACAAGCAGGAAGATGATCTaGTCACAATTGCACACCCAG | + |
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Preference number: 2 (lower is better) Translates to: CSKNFSETTGLNLTRLLTSRKMI*SQLHTQ Trigger: CTGGGTGTGCAATTGTGATCAGATCATCTTCCTGCT...TGTCAATAGACGTGTCAGATTTAGACCTGTGGTTTCAGAAAAATTTTTGGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| 3UTR-3UTR GCA 90 bp | ATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCTGCATGTTTTTAGAAAGAGGGCACTaGTTACCAGAAAGAAACGAA | + |
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Preference number: 2 (lower is better) Translates to: ITIAHPGVRDFIWYFCMFLERGH*LPERNE Trigger: TTCGTTTCTTTCTGGTAAGCAGTGCCCTCTTTCTAA...AAACATGCAGAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| 3UTR CAA 90 bp | GAAACGAATTTCTGTAAAGGAAGAATTTCAGACACTGTGGCAGGTTaGCAGATTTTTCAACAGAGGTCCTCAAATGACACCATAAACATG | + |
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Preference number: 2 (lower is better) Translates to: ETNFCKGRISDTVAG*QIFQQRSSNDTINM Trigger: CATGTTTATGGTGTCATTTGAGGACCTCTGTTGAAAAATCTGCAAACCTGCCACAGTGTCTGAAATTCTTCCTTTACAGAAATTCGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCAAAAATTTTTCTGAAACCACAGGTCTAAATCTGACACGTCTATTGACAAGTCAAGCAGGAAGATaGTCTGATCACAATTGCACA | + |
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Preference number: 2 (lower is better) Translates to: CSKNFSETTGLNLTRLLTSQAGR*SDHNCT Trigger: TGTGCAATTGTGATCAGATCATCTTCCTGCTTGACT...TGTCAATAGACGTGTCAGATTTAGACCTGTGGTTTCAGAAAAATTTTTGGAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCAAAAATTTTTCTGAAACCACAGGTCTAAATCTGACACGTCTATTGACACACTTATTCTGCCTATaGATAAGGCAAGTTCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: CSKNFSETTGLNLTRLLTHLFCL*IRQVPN Trigger: GTTAGGAACTTGCCTTATTCATAGGCAGAATAAGTG...TGTCAATAGACGTGTCAGATTTAGACCTGTGGTTTCAGAAAAATTTTTGGAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCAAAAATTTTTCTGAAACCACAGGTCTAAATCTGACACGTCTATTGACAGAATTTCAGACACTGTaGCAGGTTTGCAGATTTTTC | + |
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Preference number: 2 (lower is better) Translates to: CSKNFSETTGLNLTRLLTEFQTL*QVCRFF Trigger: GAAAAATCTGCAAACCTGCCACAGTGTCTGAAATTC...TGTCAATAGACGTGTCAGATTTAGACCTGTGGTTTCAGAAAAATTTTTGGAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| 3UTR TCA 72 bp | TTAGCCCAGTTATTAATCCATGGCAGTTGTAAGTGTTaGCCCAGTAAGGCAAGCACTGTGCCCCAGATCCTT | + |
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Preference number: 3 (lower is better) Translates to: LAQLLIHGSCKC*PSKASTVPQIL Trigger: AAGGATCTGGGGCACAGTGCTTGCCTTACTGGGTCAACACTTACAACTGCCATGGATTAATAACTGGGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| 3UTR GCA 72 bp | ACTTTTCAAACAACAAAAATCTGGACACCATACACCTaGACACAGCTTAGAGTCGGATACACACGCTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: TFQTTKIWTPYT*TQLRVGYTRWE Trigger: CTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGTATGGTGTCCAGATTTTTGTTGTTTGAAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| 3UTR GCA 72 bp | GCACACCCAGGGGTTAGGGATTTCATATGGTACTTCTaGATGTTTTTAGAAAGAGGGCACTGCTTACCAGAA | + |
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Preference number: 3 (lower is better) Translates to: AHPGVRDFIWYF*MFLERGHCLPE Trigger: TTCTGGTAAGCAGTGCCCTCTTTCTAAAAACATGCAGAAGTACCATATGAAATCCCTAACCCCTGGGTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CCA 90 bp | TACACCTGCACACAGCTTAGAGTCGGATACACACGCTGGGAGGAGAAGCAGCATGGGCTGTCGCTCAAGTaGCTTCACAACTGCCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: YTCTQLRVGYTRWEEKQHGLSLK*LHNCLV Trigger: TACAAGGCAGTTGTGAAGCCACTTGAGCGACAGCCC...ATGCTGCTTCTCCTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | ACACCTGCACACAGCTTAGAGTCGGATACACACGCTGGGAGGAGAAGCAGCATTAATCTGTCCTCTGCCTaGTTCACACTACACCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TPAHSLESDTHAGRRSSINLSSA*FTLHPV Trigger: CACTGGGTGTAGTGTGAAGCAGGCAGAGGACAGATT...AATGCTGCTTCTCCTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CCA 90 bp | ACACCATACACCTGCACACAGCTTAGAGTCGGATACACACGCTGGGAGGAGAAGCAATGCTTCTATTCCTaGAGAGTTGTCCCCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TPYTCTQLRVGYTRWEEKQCFYS*RVVPAP Trigger: TGGAGCGGGGACAACTCTCCAGGAATAGAAGCATTG...CTTCTCCTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGTATGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | ACACCATACACCTGCACACAGCTTAGAGTCGGATACACACGCTGGGAGGAGAAGTGCAAGGTAGTGAGTTaGATCCACTGGCACACAAGT | + |
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Preference number: 4 (lower is better) Translates to: TPYTCTQLRVGYTRWEEKCKVVS*IHWHTS Trigger: ACTTGTGTGCCAGTGGATGCAACTCACTACCTTGCA...CTTCTCCTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGTATGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | ACACCTGCACACAGCTTAGAGTCGGATACACACGCTGGGAGGAGAAGCAGCATTGAACAGCCATCCTTCTaGAAGGTAGTGAGTTGCATC | + |
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Preference number: 4 (lower is better) Translates to: TPAHSLESDTHAGRRSSIEQPSF*KVVSCI Trigger: GATGCAACTCACTACCTTGCAGAAGGATGGCTGTTC...AATGCTGCTTCTCCTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | ACACCATACACCTGCACACAGCTTAGAGTCGGATACACACGCTGGGAGGAGAAGGCTTCTGGAAGCTTTTaGTCAGCCAGTAGAGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: TPYTCTQLRVGYTRWEEKASGSF*SASREQ Trigger: TTGCTCTCTACTGGCTGAGCAAAAGCTTCCAGAAGC...CTTCTCCTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGTATGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR TCA 90 bp | ACACCATACACCTGCACACAGCTTAGAGTCGGATACACACGCTGGGAGGAGAAGGGTTTGAGAAGTGAATaGATGGTAGAGGTACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: TPYTCTQLRVGYTRWEEKGLRSE*MVEVQE Trigger: CTCCTGTACCTCTACCATTCATTCACTTCTCAAACC...CTTCTCCTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGTATGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR TCA 90 bp | ACACCTGCACACAGCTTAGAGTCGGATACACACGCTGGGAGGAGAAGCAGCATTTCAGAACTTTCCATCTaGTTTCCATGGGCAGAGATT | + |
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Preference number: 4 (lower is better) Translates to: TPAHSLESDTHAGRRSSISELSI*FPWAEI Trigger: AATCTCTGCCCATGGAAATCAGATGGAAAGTTCTGA...AATGCTGCTTCTCCTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | GATGATCTGATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCCAGGCCGCTCCGCCTTaGAACAGAACAACTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: DDLITIAHPGVRDFIWYFQAAPP*NRTTEL Trigger: AAGCTCAGTTGTTCTGTTGCAAGGCGGAGCGGCCTG...GAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGATCAGATCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | GATGATCTGATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCTTTCAGACATCTGTATaGTCCCAGTGCCCGGGACCG | + |
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Preference number: 4 (lower is better) Translates to: DDLITIAHPGVRDFIWYFFQTSV*SQCPGP Trigger: CGGTCCCGGGCACTGGGAGCATACAGATGTCTGAAA...GAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGATCAGATCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR TCA 90 bp | ACACCATACACCTGCACACAGCTTAGAGTCGGATACACACGCTGGGAGGAGAAGCACTTATTCTGCCTATaGATAAGGCAAGTTCCTAAC | + |
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Preference number: 4 (lower is better) Translates to: TPYTCTQLRVGYTRWEEKHLFCL*IRQVPN Trigger: GTTAGGAACTTGCCTTATTCATAGGCAGAATAAGTG...CTTCTCCTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGTATGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | ACACCTGCACACAGCTTAGAGTCGGATACACACGCTGGGAGGAGAAGCAGCATTATAGATGGCACACAATaGTTCTATTCCTGGAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: TPAHSLESDTHAGRRSSIIDGTQ*FYSWRV Trigger: AACTCTCCAGGAATAGAAGCATTGTGTGCCATCTAT...AATGCTGCTTCTCCTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | TACACCTGCACACAGCTTAGAGTCGGATACACACGCTGGGAGGAGAAGCAGCATTTAGAAAGAGGGCACTaGTTACCAGAAAGAAACGAA | + |
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Preference number: 4 (lower is better) Translates to: YTCTQLRVGYTRWEEKQHLERGH*LPERNE Trigger: TTCGTTTCTTTCTGGTAAGCAGTGCCCTCTTTCTAA...ATGCTGCTTCTCCTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CCA 90 bp | GATGATCTGATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCCACAAGTCTTCAGGATaGCATTGGAGGGCTGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: DDLITIAHPGVRDFIWYFHKSSG*HWRAVA Trigger: AGCGACAGCCCTCCAATGCCATCCTGAAGACTTGTG...GAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGATCAGATCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CCA 90 bp | ACACCTGCACACAGCTTAGAGTCGGATACACACGCTGGGAGGAGAAGCAGCATTCAAACAACAAAAATCTaGACACCATACACCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: TPAHSLESDTHAGRRSSIQTTKI*TPYTCT Trigger: TGTGCAGGTGTATGGTGTCCAGATTTTTGTTGTTTG...AATGCTGCTTCTCCTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | TTACGATTCACTGGCATATATAAACTTGTCTTTCTGCACTTAGTGGGGCTTCATTCTGTATGCTCCCAGTaGCCGGGACCGTTCCCATCA | + |
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Preference number: 4 (lower is better) Translates to: LRFTGIYKLVFLHLVGLHSVCSQ*PGPFPS Trigger: TGATGGGAACGGTCCCGGGCACTGGGAGCATACAGA...ATGAAGCCCCACTAAGTGCAGAAAGACAAGTTTATATATGCCAGTGAATCGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CCA 90 bp | GATGATCTGATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCGTCGGATACACACGCTaGGAGGAGAAGCAGCATTTT | + |
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Preference number: 4 (lower is better) Translates to: DDLITIAHPGVRDFIWYFVGYTR*EEKQHF Trigger: AAAATGCTGCTTCTCCTCCCAGCGTGTGTATCCGAC...GAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGATCAGATCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR TCA 90 bp | CAACAAAAATCTGGACACCATACACCTGCACACAGCTTAGAGTCGGATACACACACCTTCCTTCCCATTTaGCTTCCCTTACGATTCACT | + |
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Preference number: 4 (lower is better) Translates to: QQKSGHHTPAHSLESDTHTFLPI*LPLRFT Trigger: AGTGAATCGTAAGGGAAGTCAAATGGGAAGGAAGGT...GTGTGTATCCGACTCTAAGCTGTGTGCAGGTGTATGGTGTCCAGATTTTTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CCA 90 bp | AAGAATTTCAGACACTGTGGCAGGTTTGCAGATTTTTCAACAGAGGTCCTCAAATCTTCAGGATGGCATTaGAGGGCTGTCGCTCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: KNFRHCGRFADFSTEVLKSSGWH*RAVAQV Trigger: CACTTGAGCGACAGCCCTCCAATGCCATCCTGAAGA...TTTGAGGACCTCTGTTGAAAAATCTGCAAACCTGCCACAGTGTCTGAAATTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR TCA 90 bp | GATGATCTGATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCTCCAAGGATGCCCACTaGAATGATCACAGCATAAGT | + |
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Preference number: 4 (lower is better) Translates to: DDLITIAHPGVRDFIWYFSKDAH*NDHSIS Trigger: ACTTATGCTGTGATCATTTCAGTGGGCATCCTTGGA...GAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGATCAGATCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR TCA 90 bp | CAACAAAAATCTGGACACCATACACCTGCACACAGCTTAGAGTCGGATACACACAGTCAAGCAGGAAGATaGTCTGATCACAATTGCACA | + |
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Preference number: 4 (lower is better) Translates to: QQKSGHHTPAHSLESDTHSQAGR*SDHNCT Trigger: TGTGCAATTGTGATCAGATCATCTTCCTGCTTGACT...GTGTGTATCCGACTCTAAGCTGTGTGCAGGTGTATGGTGTCCAGATTTTTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | GATGATCTGATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCGATTGTCACGTCCAATaGCTACGTCTAGTAACGAGA | + |
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Preference number: 4 (lower is better) Translates to: DDLITIAHPGVRDFIWYFDCHVQ*LRLVTR Trigger: TCTCGTTACTAGACGTAGGCATTGGACGTGACAATC...GAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGATCAGATCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CCA 90 bp | ATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCTGCATGTTTATCTGCTTACGGGCATaGCTTTGTTCCTCAGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: ITIAHPGVRDFIWYFCMFICLRA*LCSSVG Trigger: ACCTACTGAGGAACAAAGCCATGCCCGTAAGCAGAT...AAACATGCAGAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR TCA 90 bp | CAACAAAAATCTGGACACCATACACCTGCACACAGCTTAGAGTCGGATACACACTTGCAACAGAACAACTaGGCTTTAAAATGCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QQKSGHHTPAHSLESDTHLQQNN*ALKCFW Trigger: CCAGAAGCATTTTAAAGCTCAGTTGTTCTGTTGCAA...GTGTGTATCCGACTCTAAGCTGTGTGCAGGTGTATGGTGTCCAGATTTTTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR TCA 90 bp | AAGAATTTCAGACACTGTGGCAGGTTTGCAGATTTTTCAACAGAGGTCCTCAAAAGCAGGAAGATGATCTaGTCACAATTGCACACCCAG | + |
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Preference number: 4 (lower is better) Translates to: KNFRHCGRFADFSTEVLKSRKMI*SQLHTQ Trigger: CTGGGTGTGCAATTGTGATCAGATCATCTTCCTGCT...TTTGAGGACCTCTGTTGAAAAATCTGCAAACCTGCCACAGTGTCTGAAATTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | AAGAATTTCAGACACTGTGGCAGGTTTGCAGATTTTTCAACAGAGGTCCTCAAAAAGTGGCTTCACAACTaGCTTGTATCTGTCAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: KNFRHCGRFADFSTEVLKKWLHN*LVSVSA Trigger: AGCGCTGACAGATACAAGGCAGTTGTGAAGCCACTT...TTTGAGGACCTCTGTTGAAAAATCTGCAAACCTGCCACAGTGTCTGAAATTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | TTACGATTCACTGGCATATATAAACTTGTCTTTCTGCACTTAGTGGGGCTTCATCTAGAATCTGTCCTCTaGCTGCTTCACACTACACCC | + |
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Preference number: 4 (lower is better) Translates to: LRFTGIYKLVFLHLVGLHLESVL*LLHTTP Trigger: GGGTGTAGTGTGAAGCAGGCAGAGGACAGATTCTAG...ATGAAGCCCCACTAAGTGCAGAAAGACAAGTTTATATATGCCAGTGAATCGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | TTACGATTCACTGGCATATATAAACTTGTCTTTCTGCACTTAGTGGGGCTTCATGTAAGGCAAGCACTGTaGCCCAGATCCTTACTCAGT | + |
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Preference number: 4 (lower is better) Translates to: LRFTGIYKLVFLHLVGLHVRQAL*PRSLLS Trigger: ACTGAGTAAGGATCTGGGGCACAGTGCTTGCCTTAC...ATGAAGCCCCACTAAGTGCAGAAAGACAAGTTTATATATGCCAGTGAATCGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CCA 90 bp | CAACAAAAATCTGGACACCATACACCTGCACACAGCTTAGAGTCGGATACACACGAATTTCAGACACTGTaGCAGGTTTGCAGATTTTTC | + |
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Preference number: 4 (lower is better) Translates to: QQKSGHHTPAHSLESDTHEFQTL*QVCRFF Trigger: GAAAAATCTGCAAACCTGCCACAGTGTCTGAAATTC...GTGTGTATCCGACTCTAAGCTGTGTGCAGGTGTATGGTGTCCAGATTTTTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR TCA 90 bp | GATGATCTGATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCCATAGGTTTGAGAAGTaGATGAATGGTAGAGGTACA | + |
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Preference number: 4 (lower is better) Translates to: DDLITIAHPGVRDFIWYFHRFEK*MNGRGT Trigger: TGTACCTCTACCATTCATTCACTTCTCAAACCTATG...GAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGATCAGATCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | ATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCTGCATGTTTATGGTGAAAATGAAATaGATGGCAGAGGGGTCTACA | + |
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Preference number: 4 (lower is better) Translates to: ITIAHPGVRDFIWYFCMFMVKMK*MAEGST Trigger: TGTAGACCCCTCTGCCATGCATTTCATTTTCACCAT...AAACATGCAGAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | TGCTCCAAAAATTTTTCTGAAACCACAGGTCTAAATCTGACACGTCTATTGACATGGACACCATACACCTaGACACAGCTTAGAGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: CSKNFSETTGLNLTRLLTWTPYT*TQLRVG Trigger: TCCGACTCTAAGCTGTGTGCAGGTGTATGGTGTCCA...TGTCAATAGACGTGTCAGATTTAGACCTGTGGTTTCAGAAAAATTTTTGGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CCA 90 bp | TGCTCCAAAAATTTTTCTGAAACCACAGGTCTAAATCTGACACGTCTATTGACAGTACAGGAGGTGATTTaGCAACCAGCAGAGGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: CSKNFSETTGLNLTRLLTVQEVI*QPAEGK Trigger: TTTGCCCTCTGCTGGTTGCCAAATCACCTCCTGTAC...TGTCAATAGACGTGTCAGATTTAGACCTGTGGTTTCAGAAAAATTTTTGGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR TCA 90 bp | TTACGATTCACTGGCATATATAAACTTGTCTTTCTGCACTTAGTGGGGCTTCATTTACGCAAGAATTGCTaGAAGCCAAAACCCGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LRFTGIYKLVFLHLVGLHLRKNC*KPKPER Trigger: TCTCTCGGGTTTTGGCTTTCAGCAATTCTTGCGTAA...ATGAAGCCCCACTAAGTGCAGAAAGACAAGTTTATATATGCCAGTGAATCGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | AAGAATTTCAGACACTGTGGCAGGTTTGCAGATTTTTCAACAGAGGTCCTCAAAACACTGTGGCAGGTTTaGAGATTTTTCAACAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: KNFRHCGRFADFSTEVLKTLWQV*RFFNRG Trigger: ACCTCTGTTGAAAAATCTGCAAACCTGCCACAGTGT...TTTGAGGACCTCTGTTGAAAAATCTGCAAACCTGCCACAGTGTCTGAAATTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR TCA 90 bp | TGCTCCAAAAATTTTTCTGAAACCACAGGTCTAAATCTGACACGTCTATTGACACAGTTCAAATGCAGTTaGTTGTCACGTCCAATGCCT | + |
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Preference number: 4 (lower is better) Translates to: CSKNFSETTGLNLTRLLTQFKCS*LSRPMP Trigger: AGGCATTGGACGTGACAATCAACTGCATTTGAACTG...TGTCAATAGACGTGTCAGATTTAGACCTGTGGTTTCAGAAAAATTTTTGGAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR TCA 90 bp | TTACGATTCACTGGCATATATAAACTTGTCTTTCTGCACTTAGTGGGGCTTCATAGCAGCATTTTTCCTTaGAAAGCTAGAATCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LRFTGIYKLVFLHLVGLHSSIFP*KARICP Trigger: AGGACAGATTCTAGCTTTTCAAGGAAAAATGCTGCT...ATGAAGCCCCACTAAGTGCAGAAAGACAAGTTTATATATGCCAGTGAATCGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CCA 90 bp | TGCTCCAAAAATTTTTCTGAAACCACAGGTCTAAATCTGACACGTCTATTGACAACACCAATACCGTTCTaGCAATTCTCTTTCGGGATT | + |
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Preference number: 4 (lower is better) Translates to: CSKNFSETTGLNLTRLLTTPIPF*QFSFGI Trigger: AATCCCGAAAGAGAATTGCCAGAACGGTATTGGTGT...TGTCAATAGACGTGTCAGATTTAGACCTGTGGTTTCAGAAAAATTTTTGGAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR TCA 90 bp | TGCTCCAAAAATTTTTCTGAAACCACAGGTCTAAATCTGACACGTCTATTGACAGCAAATCACAGTATATaGGGAGTTAGAAGCATCACA | + |
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Preference number: 4 (lower is better) Translates to: CSKNFSETTGLNLTRLLTANHSI*GVRSIT Trigger: TGTGATGCTTCTAACTCCTCATATACTGTGATTTGC...TGTCAATAGACGTGTCAGATTTAGACCTGTGGTTTCAGAAAAATTTTTGGAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR GCA 90 bp | AAGAATTTCAGACACTGTGGCAGGTTTGCAGATTTTTCAACAGAGGTCCTCAAAAGAGAATGTATTTCTTaGAAGAGCTTCTTAGAGACA | + |
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Preference number: 4 (lower is better) Translates to: KNFRHCGRFADFSTEVLKRECIS*KSFLET Trigger: TGTCTCTAAGAAGCTCTTGCAAGAAATACATTCTCT...TTTGAGGACCTCTGTTGAAAAATCTGCAAACCTGCCACAGTGTCTGAAATTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CAA 90 bp | TACACCTGCACACAGCTTAGAGTCGGATACACACGCTGGGAGGAGAAGCAGCATGGGTTTACGCAAGAATaGCTGAAAGCCAAAACCCGA | + |
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Preference number: 5 (lower is better) Translates to: YTCTQLRVGYTRWEEKQHGFTQE*LKAKTR Trigger: TCGGGTTTTGGCTTTCAGCAATTCTTGCGTAAACCC...ATGCTGCTTCTCCTCCCAGCGTGTGTATCCGACTCTAAGCTGTGTGCAGGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CAA 90 bp | GATGATCTGATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCGTCTTCAGGATGGCATaGGAGGGCTGTCGCTCAAGT | + |
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Preference number: 5 (lower is better) Translates to: DDLITIAHPGVRDFIWYFVFRMA*EGCRSS Trigger: ACTTGAGCGACAGCCCTCCAATGCCATCCTGAAGAC...GAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGATCAGATCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS TCA 90 bp | AATGAAATGCATGGCAGAGGGGTCTACATAGGTTTGAGAAGTGAATaGATGGTAGAGGTACAGGAGGTGATTTGGCAACCAGCAGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: NEMHGRGVYIGLRSE*MVEVQEVIWQPAEG Trigger: GCCCTCTGCTGGTTGCCAAATCACCTCCTGTACCTCTACCATTCATTCACTTCTCAAACCTATGTAGACCCCTCTGCCATGCATTTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CAA 90 bp | ATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCTGCATGTTTGGCTTCACAACTGCCTaGTATCTGTCAGCGCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: ITIAHPGVRDFIWYFCMFGFTTA*YLSALR Trigger: TCTCAGCGCTGACAGATACAAGGCAGTTGTGAAGCC...AAACATGCAGAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CAA 90 bp | ATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCTGCATGTTTTCTATTCCTGGAGAGTaGTCCCCGCTCCATCCTTTA | + |
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Preference number: 5 (lower is better) Translates to: ITIAHPGVRDFIWYFCMFSIPGE*SPLHPL Trigger: TAAAGGATGGAGCGGGGACAACTCTCCAGGAATAGA...AAACATGCAGAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CAA 90 bp | GATGATCTGATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCTCAGTTCAAATGCAGTaGATTGTCACGTCCAATGCC | + |
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Preference number: 5 (lower is better) Translates to: DDLITIAHPGVRDFIWYFSVQMQ*IVTSNA Trigger: GGCATTGGACGTGACAATCAACTGCATTTGAACTGA...GAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGATCAGATCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CAA 90 bp | ATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCTGCATGTTTCTTACGGGCATGGCTTaGTTCCTCAGTAGGTATGTT | + |
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Preference number: 5 (lower is better) Translates to: ITIAHPGVRDFIWYFCMFLTGMA*FLSRYV Trigger: AACATACCTACTGAGGAACAAAGCCATGCCCGTAAG...AAACATGCAGAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CAA 90 bp | ATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCTGCATGTTTGACACTGTGGCAGGTTaGCAGATTTTTCAACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ITIAHPGVRDFIWYFCMFDTVAG*QIFQQR Trigger: CCTCTGTTGAAAAATCTGCAAACCTGCCACAGTGTC...AAACATGCAGAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS CCA 90 bp | GATCACAGCATAAGTAATATAGATGGCACACAATGCTTCTATTCCTaGAGAGTTGTCCCCGCTCCATCCTTTATTTGTGTTATCGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: DHSISNIDGTQCFYS*RVVPAPSFICVIVR Trigger: TCTAACGATAACACAAATAAAGGATGGAGCGGGGACAACTCTCCAGGAATAGAAGCATTGTGTGCCATCTATATTACTTATGCTGTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CAA 90 bp | TGCTCCAAAAATTTTTCTGAAACCACAGGTCTAAATCTGACACGTCTATTGACACACCTTCCTTCCCATTaGACTTCCCTTACGATTCAC | + |
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Preference number: 5 (lower is better) Translates to: CSKNFSETTGLNLTRLLTHLPSH*TSLTIH Trigger: GTGAATCGTAAGGGAAGTCAAATGGGAAGGAAGGTG...TGTCAATAGACGTGTCAGATTTAGACCTGTGGTTTCAGAAAAATTTTTGGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CAA 90 bp | TTACGATTCACTGGCATATATAAACTTGTCTTTCTGCACTTAGTGGGGCTTCATGGACTTAGGCACCCATaGGGTTTAATAAAGTCAAGC | + |
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Preference number: 5 (lower is better) Translates to: LRFTGIYKLVFLHLVGLHGLRHP*GLIKSS Trigger: GCTTGACTTTATTAAACCCAATGGGTGCCTAAGTCC...ATGAAGCCCCACTAAGTGCAGAAAGACAAGTTTATATATGCCAGTGAATCGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CAA 90 bp | ATCACAATTGCACACCCAGGGGTTAGGGATTTCATATGGTACTTCTGCATGTTTACTGTTTGCATGGATTaGGTCTTGAAAAAGACTTTG | + |
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Preference number: 5 (lower is better) Translates to: ITIAHPGVRDFIWYFCMFTVCMD*VLKKTL Trigger: CAAAGTCTTTTTCAAGACCAAATCCATGCAAACAGT...AAACATGCAGAAGTACCATATGAAATCCCTAACCCCTGGGTGTGCAATTGTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS TCA 90 bp | GAAGACTGTGTCTTTAATATTTCTTCTTCTCAGTTCAAATGCAGTTaGTTGTCACGTCCAATGCCTACGTCTAGTAACGAGATGGTATTA | + |
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Preference number: 5 (lower is better) Translates to: EDCVFNISSSQFKCS*LSRPMPTSSNEMVL Trigger: TAATACCATCTCGTTACTAGACGTAGGCATTGGACGTGACAATCAACTGCATTTGAACTGAGAAGAAGAAATATTAAAGACACAGTCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS TCA 90 bp | CTTGAAAAAGACTTTGATGAGAATAGCATTTCCAAGGATGCCCACTaGAATGATCACAGCATAAGTAATATAGATGGCACACAATGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LEKDFDENSISKDAH*NDHSISNIDGTQCF Trigger: GAAGCATTGTGTGCCATCTATATTACTTATGCTGTGATCATTTCAGTGGGCATCCTTGGAAATGCTATTCTCATCAAAGTCTTTTTCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS-3UTR CAA 90 bp | TGCTCCAAAAATTTTTCTGAAACCACAGGTCTAAATCTGACACGTCTATTGACACAGAGAATGTATTTCTaGCAAGAGCTTCTTAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: CSKNFSETTGLNLTRLLTQRMYF*QELLRD Trigger: GTCTCTAAGAAGCTCTTGCAAGAAATACATTCTCTG...TGTCAATAGACGTGTCAGATTTAGACCTGTGGTTTCAGAAAAATTTTTGGAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS CCA 72 bp | AGTCTTCAGGATGGCATTGGAGGGCTGTCGCTCAAGTaGCTTCACAACTGCCTTGTATCTGTCAGCGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SLQDGIGGLSLK*LHNCLVSVSAE Trigger: CTCAGCGCTGACAGATACAAGGCAGTTGTGAAGCCACTTGAGCGACAGCCCTCCAATGCCATCCTGAAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS CAA 72 bp | ACGCAGCCAGCTTTTACACAAGTCTTCAGGATGGCATaGGAGGGCTGTCGCTCAAGTGGCTTCACAACTGCC | + |
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Preference number: 6 (lower is better) Translates to: TQPAFTQVFRMA*EGCRSSGFTTA Trigger: GGCAGTTGTGAAGCCACTTGAGCGACAGCCCTCCAATGCCATCCTGAAGACTTGTGTAAAAGCTGGCTGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS CCA 72 bp | TCCAGACGCAGCCAGCTTTTACACAAGTCTTCAGGATaGCATTGGAGGGCTGTCGCTCAAGTGGCTTCACAA | + |
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Preference number: 6 (lower is better) Translates to: SRRSQLLHKSSG*HWRAVAQVASQ Trigger: TTGTGAAGCCACTTGAGCGACAGCCCTCCAATGCCATCCTGAAGACTTGTGTAAAAGCTGGCTGCGTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS CAA 90 bp | ACGATCCAGACGCAGCCAGCTTTTACACAAGTCTTCAGGATGGCATaGGAGGGCTGTCGCTCAAGTGGCTTCACAACTGCCTTGTATCTG | + |
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Preference number: 6 (lower is better) Translates to: TIQTQPAFTQVFRMA*EGCRSSGFTTALYL Trigger: CAGATACAAGGCAGTTGTGAAGCCACTTGAGCGACAGCCCTCCAATGCCATCCTGAAGACTTGTGTAAAAGCTGGCTGCGTCTGGATCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS GCA 72 bp | GCAGCATTTTTCCTTGAAAAGCTAGAATCTGTCCTCTaGCTGCTTCACACTACACCCAGTGAACGAGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: AAFFLEKLESVL*LLHTTPSERGH Trigger: GTGACCTCGTTCACTGGGTGTAGTGTGAAGCAGGCAGAGGACAGATTCTAGCTTTTCAAGGAAAAATGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS TCA 72 bp | CATGGCAGAGGGGTCTACATAGGTTTGAGAAGTGAATaGATGGTAGAGGTACAGGAGGTGATTTGGCAACCA | + |
|
Preference number: 6 (lower is better) Translates to: HGRGVYIGLRSE*MVEVQEVIWQP Trigger: TGGTTGCCAAATCACCTCCTGTACCTCTACCATTCATTCACTTCTCAAACCTATGTAGACCCCTCTGCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS TCA 72 bp | AATGCATGGCAGAGGGGTCTACATAGGTTTGAGAAGTaGATGAATGGTAGAGGTACAGGAGGTGATTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: NAWQRGLHRFEK*MNGRGTGGDLA Trigger: TGCCAAATCACCTCCTGTACCTCTACCATTCATTCACTTCTCAAACCTATGTAGACCCCTCTGCCATGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS CAA 72 bp | TCTCTTTCGGGATTCAATCTGCTTACGGGCATGGCTTaGTTCCTCAGTAGGTATGTTCAGGGTGCTTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SLSGFNLLTGMA*FLSRYVQGAFV Trigger: TACAAAAGCACCCTGAACATACCTACTGAGGAACAAAGCCATGCCCGTAAGCAGATTGAATCCCGAAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS GCA 72 bp | AATGATCACAGCATAAGTAATATAGATGGCACACAATaGTTCTATTCCTGGAGAGTTGTCCCCGCTCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: NDHSISNIDGTQ*FYSWRVVPAPS Trigger: GGATGGAGCGGGGACAACTCTCCAGGAATAGAAGCATTGTGTGCCATCTATATTACTTATGCTGTGATCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS CCA 72 bp | ATAAGTAATATAGATGGCACACAATGCTTCTATTCCTaGAGAGTTGTCCCCGCTCCATCCTTTATTTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ISNIDGTQCFYS*RVVPAPSFICV Trigger: AACACAAATAAAGGATGGAGCGGGGACAACTCTCCAGGAATAGAAGCATTGTGTGCCATCTATATTACTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS CAA 90 bp | AGGCTGGTGATGAAAATATTTGGAACTGTTTGCATGGATTTGGTCTaGAAAAAGACTTTGATGAGAATAGCATTTCCAAGGATGCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: RLVMKIFGTVCMDLV*KKTLMRIAFPRMPT Trigger: AGTGGGCATCCTTGGAAATGCTATTCTCATCAAAGTCTTTTTCAAGACCAAATCCATGCAAACAGTTCCAAATATTTTCATCACCAGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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| CDS CAA 90 bp | AAAATATTTGGAACTGTTTGCATGGATTTGGTCTTGAAAAAGACTTaGATGAGAATAGCATTTCCAAGGATGCCCACTGAAATGATCACA | + |
|
Preference number: 6 (lower is better) Translates to: KIFGTVCMDLVLKKT*MRIAFPRMPTEMIT Trigger: TGTGATCATTTCAGTGGGCATCCTTGGAAATGCTATTCTCATCAAAGTCTTTTTCAAGACCAAATCCATGCAAACAGTTCCAAATATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370648.4 |
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