RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRPF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000096070

Ensembl transcript IDs: ENST00000339717.11, ENST00000357641.10, ENST00000441123.1, ENST00000441730.2, ENST00000446974.1, ENST00000449261.6, ENST00000454960.1, ENST00000527657.1, ENST00000532330.5, ENST00000532538.1, ENST00000534400.5, ENST00000534694.5

Found 1696 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGGCTGTGGTGGTGGTGGCTGTGCCAGCTTCTGCCGAAGGGCATTaGTCTCCCGGCGTAGCAGGCGGACACGACGGGTGCGGGCCCCAC +
Preference number: 1 (lower is better)
Translates to: VAVVVVAVPASAEGH*SPGVAGGHDGCGPH
Trigger: GTGGGGCCCGCACCCGTCGTGTCCGCCTGCTACGCCGGGAGATCAATGCCCTTCGGCAGAAGCTGGCACAGCCACCACCACCACAGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CCA 90 bp GGTCATAGCCGATGTTCTCTGCCTGCCGCCGGGCGTGCCGTAGGATaGCCCCTCCCAGGTCCCGCAGGCGGACAGCTGCTCGGTGGAAAA +
Preference number: 1 (lower is better)
Translates to: GHSRCSLPAAGRAVG*PLPGPAGGQLLGGK
Trigger: TTTTCCACCGAGCAGCTGTCCGCCTGCGGGACCTGGGAGGGGCCATCCTACGGCACGCCCGGCGGCAGGCAGAGAACATCGGCTATGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR GCA 90 bp AAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTaGCCTGCGGGATGGAGGCAGGGCAAGCGGATGCAGGCCCAGCCC +
Preference number: 1 (lower is better)
Translates to: KLPAIHLAGAEEASL*PAGWRQGKRMQAQP
Trigger: GGGCTGGGCCTGCATCCGCTTGCCCTGCCTCCATCCCGCAGGGCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR CCA 90 bp GCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCTGGCTaGAGAGGCAGGAGAGCCTGCCACACCATGGTCCTCGCCATTCTC +
Preference number: 1 (lower is better)
Translates to: APWPLPGVALFLDAG*RGRRACHTMVLAIL
Trigger: GAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCTCCAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CCA 90 bp TCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCTaGCTGGAGAGGCAGGAGAGCCTGCCACACCATGGTCCTCGCCAT +
Preference number: 1 (lower is better)
Translates to: SCSLAASGSGALPRC*LERQESLPHHGPRH
Trigger: ATGGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCTCCAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CCA 90 bp CCTTCGCTCTCACTACAGCTCCTGCTCCTTGGCCGCTTCCGGGAGTaGCGCTCTTCCTCGATGCTGGCTGGAGAGGCAGGAGAGCCTGCC +
Preference number: 1 (lower is better)
Translates to: PSLSLQLLLLGRFRE*RSSSMLAGEAGEPA
Trigger: GGCAGGCTCTCCTGCCTCTCCAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGAGAGCGAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR GCA 90 bp ATGGAGCGGGCCAGGCAGCCCCTCAAGAAGGAGCCCAGGACCTCTTaGCATCTGGGCAATCTCCTAAGCTGGGCCCAAGCCCCACAGCTG +
Preference number: 1 (lower is better)
Translates to: MERARQPLKKEPRTS*HLGNLLSWAQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGGCTGCCTGGCCCGCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR GCA 90 bp GGAGTGGCGCTCTTCCTCGATGCTGGCTGGAGAGGCAGGAGAGCCTaGCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCT +
Preference number: 1 (lower is better)
Translates to: GVALFLDAGWRGRRA*HTMVLAILQDPVWA
Trigger: AGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCTCCAGCCAGCATCGAGGAAGAGCGCCACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR TCA 90 bp GTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTaGGGTGTAGTTAGTGGGAGTAGGATGGAGCGGGCCAGGCAGCCC +
Preference number: 1 (lower is better)
Translates to: VSTASLGSVSEPHPP*GVVSGSRMERARQP
Trigger: GGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR CCA 90 bp TCTTCCTCGATGCTGGCTGGAGAGGCAGGAGAGCCTGCCACACCATaGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTCTCTGTAGC +
Preference number: 1 (lower is better)
Translates to: SSSMLAGEAGEPATP*SSPFSRTLSGLLCS
Trigger: GCTACAGAGAAGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCTCCAGCCAGCATCGAGGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR TCA 90 bp GGACCGAGAAGAGGTGTGAGAATAGGCGATAAGCGGGAGAGAGTGTaGGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCA +
Preference number: 1 (lower is better)
Translates to: GPRRGVRIGDKRERV*AWGDSPWDPGVSTA
Trigger: TGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACTCTCTCCCGCTTATCGCCTATTCTCACACCTCTTCTCGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR GCA 90 bp AGAAGCGGTAAAAGTCTTCCAATTTGGGTGACTCGGGCAGGTGAGTaGCCCTCTCGGGGTCATAGCCGATGTTCTCTGCCTGCCGCCGGG +
Preference number: 1 (lower is better)
Translates to: RSGKSLPIWVTRAGE*PSRGHSRCSLPAAG
Trigger: CCCGGCGGCAGGCAGAGAACATCGGCTATGACCCCGAGAGGGGCACTCACCTGCCCGAGTCACCCAAATTGGAAGACTTTTACCGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CCA 90 bp AACAAGAGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTaGGAAGTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAG +
Preference number: 1 (lower is better)
Translates to: NKRGPALIQGAHLQS*EVVSTAKGKVCGWE
Trigger: CTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR CCA 90 bp AAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCA +
Preference number: 1 (lower is better)
Translates to: KKEPRTSCHLGNLLS*AQAPQLFLLLTGSS
Trigger: TGAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR CCA 90 bp CGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTaGTGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCAT +
Preference number: 1 (lower is better)
Translates to: RRPGRCLVAGAMPSR*WRVKLKTAIAEKVH
Trigger: ATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCACCACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR CCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTaGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTT +
Preference number: 1 (lower is better)
Translates to: SPKLGPSPTAVSTSN*FFSEISPEGPWVGV
Trigger: AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR CCA 90 bp AGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTGGTaGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAG +
Preference number: 1 (lower is better)
Translates to: RPGRCLVAGAMPSRW*RVKLKTAIAEKVHE
Trigger: CTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCACCACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR TCA 90 bp GAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTGGTGGAGAGTaGAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAA +
Preference number: 1 (lower is better)
Translates to: EDVWWQAPCHPGGGE*SLRLQLQKKSMRRE
Trigger: TTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCACCACCTGGATGGCATGGCGCCTGCCACCAAACATCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR GCA 90 bp GCCATGAGGGATAGTCTGTTGATGCCATTGTCACTGAGCAAGCGTTaGAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGC +
Preference number: 1 (lower is better)
Translates to: AMRDSLLMPLSLSKR*KGSFPSCSGDFSKS
Trigger: GCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCATCAACAGACTATCCCTCATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR GCA 90 bp ATGCCATTGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTaGAGTGGTGATTTTTCCAAGAGCTCATCTTCTTCCACCTTTCTG +
Preference number: 1 (lower is better)
Translates to: MPLSLSKRCKGSFPS*SGDFSKSSSSSTFL
Trigger: CAGAAAGGTGGAAGAAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CCA 90 bp GAAGCACTGGCTCCTTTAAATCAACGACACTGTGTGGCCACACAATaGAGGACTCCAGTAATGGAAACTATAGGCCTGAATAATTTAGAA +
Preference number: 1 (lower is better)
Translates to: EALAPLNQRHCVATQ*RTPVMETIGLNNLE
Trigger: TTCTAAATTATTCAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGAGCCAGTGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp AGCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGGGGCGTGCCGTAGGATaGCCCCTCCCAGGTCCCGCA +
Preference number: 2 (lower is better)
Translates to: SRRTRRVRAPLDRMALTRGRAVG*PLPGPA
Trigger: TGCGGGACCTGGGAGGGGCCATCCTACGGCACGCCC...CCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR GCA 90 bp GCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTATGGGAACGCCATTGTaGAGGAGGCCCTCCCGGGGC +
Preference number: 2 (lower is better)
Translates to: AGGHDGCGPHWTAWRSPGMGTPL*RRPSRG
Trigger: GCCCCGGGAGGGCCTCCTGCACAATGGCGTTCCCAT...ACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532330.5
3UTR CAA 90 bp GGTGGCTGTGGTGGTGGTGGCTGTGCCAGCTTCTGCCGAAGGGCATaGATCTCCCGGCGTAGCAGGCGGACACGACGGGTGCGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: GGCGGGGCASFCRRA*ISRRSRRTRRVRAP
Trigger: TGGGGCCCGCACCCGTCGTGTCCGCCTGCTACGCCGGGAGATCAATGCCCTTCGGCAGAAGCTGGCACAGCCACCACCACCACAGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp GGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACCTGTGCCCTGCGGGATaGAGGCAGGGCAAGCGGATG +
Preference number: 2 (lower is better)
Translates to: GVGPPDSAQVDHRTVIGHLCPAG*RQGKRM
Trigger: CATCCGCTTGCCCTGCCTCCATCCCGCAGGGCACAG...GTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR CCA 90 bp AGCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 2 (lower is better)
Translates to: SRRTRRVRAPLDRMALTRAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...CCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGGGCGTGCCGTAGGATaGCCCCTCCCAGGTCCCGCA +
Preference number: 2 (lower is better)
Translates to: LAYHERGKLPAIHLAGAEGRAVG*PLPGPA
Trigger: TGCGGGACCTGGGAGGGGCCATCCTACGGCACGCCC...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR TCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTCCCTGGCCTACCATaGGAGGGGGAAGCTGCCGGC +
Preference number: 2 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLVPGLP*EGEAAG
Trigger: GCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGAC...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR TCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGGTCCCTGGCCTACCATaGGAGGGGGAAGCTGCCGGC +
Preference number: 2 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRVPGLP*EGEAAG
Trigger: GCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGAC...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR TCA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTGCCTCTGTCTGGGCCTaGGGAGCCTGGCAGAGACAC +
Preference number: 2 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGASVWA*GAWQRH
Trigger: GTGTCTCTGCCAGGCTCCTCAGGCCCAGACAGAGGC...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR GCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGGCGGACACGACGGGTaGGGGCCCCACTGGACCGCA +
Preference number: 2 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWGGHDG*GPHWTA
Trigger: TGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCC...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCACTGTGCCCTGCGGGATaGAGGCAGGGCAAGCGGATG +
Preference number: 2 (lower is better)
Translates to: AQSLAYHERGKLPAIHLALCPAG*RQGKRM
Trigger: CATCCGCTTGCCCTGCCTCCATCCCGCAGGGCACAG...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp AGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCTGGCTGGAAGTGACGAAGGAGTaGGGCCCCCGGACTCTGCTC +
Preference number: 2 (lower is better)
Translates to: SSCSLAASGSGALPRCWLEVTKE*GPRTLL
Trigger: GAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACTTC...CAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp AGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCTGGCTGCCCCACTGGACCGCATaGCGCTCACCAGGTCCAGTT +
Preference number: 2 (lower is better)
Translates to: SSCSLAASGSGALPRCWLPHWTA*RSPGPV
Trigger: AACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGG...CAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp AGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCTGGCTGACCCACACCACTAAGTaGGGTACCGGCCGGGGTGTC +
Preference number: 2 (lower is better)
Translates to: SSCSLAASGSGALPRCWLTHTTK*GTGRGV
Trigger: GACACCCCGGCCGGTACCCCACTTAGTGGTGTGGGT...CAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CAA 90 bp GATGGAGCGGGCCAGGCAGCCCCTCAAGAAGGAGCCCAGGACCTCTaGCCATCTGGGCAATCTCCTAAGCTGGGCCCAAGCCCCACAGCT +
Preference number: 2 (lower is better)
Translates to: DGAGQAAPQEGAQDL*PSGQSPKLGPSPTA
Trigger: AGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGGCTGCCTGGCCCGCTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR TCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGTCCCTGGCCTACCATaGGAGGGGGAAGCTGCCGGC +
Preference number: 2 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISVPGLP*EGEAAG
Trigger: GCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGAC...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR TCA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCAAGAGGGGACCCGCCTTaGTCCAGGGGGCACACTTGC +
Preference number: 2 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAARGDPP*SRGHTC
Trigger: GCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCT...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR GCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCGGGGCCCCCGGACTCTaGTCAGGTGGATCATCGCAC +
Preference number: 2 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCGAPGL*SGGSSH
Trigger: GTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCC...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR GCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGGGGGCCCCCGGACTCTaGTCAGGTGGATCATCGCAC +
Preference number: 2 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRGAPGL*SGGSSH
Trigger: GTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCC...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR GCA 90 bp ACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGGCGGACACGACGGGTaGGGGCCCCACTGGACCGCA +
Preference number: 2 (lower is better)
Translates to: TQLTSTAPHKPPSTSMWTGGHDG*GPHWTA
Trigger: TGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCC...TGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR CCA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATACTGTGCCCTGCGGGATaGAGGCAGGGCAAGCGGATG +
Preference number: 2 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVILCPAG*RQGKRM
Trigger: CATCCGCTTGCCCTGCCTCCATCCCGCAGGGCACAG...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR CCA 90 bp GCTGGCTGGAGAGGCAGGAGAGCCTGCCACACCATGGTCCTCGCCATTCTCCAGTGGGGAGATTCCCCCTaGGACCCTGGCGTATCCACG +
Preference number: 2 (lower is better)
Translates to: AGWRGRRACHTMVLAILQWGDSP*DPGVST
Trigger: CGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA...CTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCTCCAGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATATGGGGAGATTCCCCCTaGGACCCTGGCGTATCCACG +
Preference number: 2 (lower is better)
Translates to: GEKAQSLAYHERGKLPAIWGDSP*DPGVST
Trigger: CGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR TCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTGTCCCTGGCCTACCATaGGAGGGGGAAGCTGCCGGC +
Preference number: 2 (lower is better)
Translates to: IHGISGISVGTSPALRCSVPGLP*EGEAAG
Trigger: GCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGAC...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR TCA 90 bp TCACTACAGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGACAGGTAGCTGGAAGTaGCGAAGGAGTGGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: SLQLLLLGRFREWRSSSMTGSWK*RRSGAP
Trigger: GGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGT...CATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR TCA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAACAGGTAGCTGGAAGTaGCGAAGGAGTGGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVITGSWK*RRSGAP
Trigger: GGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGT...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR TCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCTCTGCCGAAGGGCATTaGTCTCCCGGCGTAGCAGGC +
Preference number: 2 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLSAEGH*SPGVAG
Trigger: GCCTGCTACGCCGGGAGATCAATGCCCTTCGGCAGA...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR TCA 90 bp AGGAGAGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTCTGCCGAAGGGCATTaGTCTCCCGGCGTAGCAGGC +
Preference number: 2 (lower is better)
Translates to: RRACHTMVLAILQDPVWASAEGH*SPGVAG
Trigger: GCCTGCTACGCCGGGAGATCAATGCCCTTCGGCAGA...AGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAATTAGTGGGAGTAGGATaGAGCGGGCCAGGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: LAYHERGKLPAIHLAGAELVGVG*SGPGSP
Trigger: GGGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAA...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTTAGTGGGAGTAGGATaGAGCGGGCCAGGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVLVGVG*SGPGSP
Trigger: GGGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAA...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp TCACTACAGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGGGGGGTCATAGGTTGTaGGCTGGCCTCTGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: SLQLLLLGRFREWRSSSMGGHRL*AGLCLG
Trigger: GCCCAGACAGAGGCCAGCCCACAACCTATGACCCCC...CATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR TCA 90 bp TTCACAGCAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGAGAGGGGACCCGCCTTaGTCCAGGGGGCACACTTGC +
Preference number: 2 (lower is better)
Translates to: FTADATETHRPRATAGSERGDPP*SRGHTC
Trigger: GCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCT...CTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTGCTGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
3UTR-3UTR TCA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAAGAGGGGACCCGCCTTaGTCCAGGGGGCACACTTGC +
Preference number: 2 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTRGDPP*SRGHTC
Trigger: GCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCT...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR GCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGGAAGAGGCTTCTCTGTaGCCTGCGGGATGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCREEASL*PAGWRQ
Trigger: CTGCCTCCATCCCGCAGGGCACAGAGAAGCCTCTTC...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR GCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCATGGGAACGCCATTGTaGAGGAGGCCCTCCCGGGGC +
Preference number: 2 (lower is better)
Translates to: TQQACQENHAIGQNWGLAMGTPL*RRPSRG
Trigger: GCCCCGGGAGGGCCTCCTGCACAATGGCGTTCCCAT...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
3UTR-3UTR GCA 90 bp GTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGGGGGCCCCCGGACTCTaGTCAGGTGGATCATCGCAC +
Preference number: 2 (lower is better)
Translates to: VVSTAKGKVCGWEVVSWGGAPGL*SGGSSH
Trigger: GTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCC...CCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAAC
62% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR GCA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATAGGCTGTGCCAGCTTCTaGCGAAGGGCATTGATCTCC +
Preference number: 2 (lower is better)
Translates to: GEKAQSLAYHERGKLPAIGCASF*RRALIS
Trigger: GGAGATCAATGCCCTTCGGCAGAAGCTGGCACAGCC...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR GCA 90 bp GCTGGCTGGAGAGGCAGGAGAGCCTGCCACACCATGGTCCTCGCCATTCTCCAGTCTTCTGGCTCCTCCTaGAAGGCCTGCTCCAGCACA +
Preference number: 2 (lower is better)
Translates to: AGWRGRRACHTMVLAILQSSGSS*KACSST
Trigger: TGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGA...CTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCTCCAGCCAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTTGCCGGCCATACATCTaGCAGGGGCAGAAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGCRPYI*QGQKRL
Trigger: AAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCA...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGTGCCGGCCATACATCTaGCAGGGGCAGAAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQCRPYI*QGQKRL
Trigger: AAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCA...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQRKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp CTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCTGGCTGGAGAGCTGAGGGACCTTGGGTaGGAGTTTTTGGCACACAGC +
Preference number: 2 (lower is better)
Translates to: LLLGRFREWRSSSMLAGELRDLG*EFLAHS
Trigger: GCTGTGTGCCAAAAACTCCCACCCAAGGTCCCTCAG...CTCTCCAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp AAGAGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTGGGGAGATTCCCCCTaGGACCCTGGCGTATCCACG +
Preference number: 2 (lower is better)
Translates to: KRGPALIQGAHLQSWEVVWGDSP*DPGVST
Trigger: CGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA...CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGCCGTTTCGGGGGTCATAGGTTGTaGGCTGGCCTCTGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: QTRQRHIGPVPQQDLSRFGGHRL*AGLCLG
Trigger: GCCCAGACAGAGGCCAGCCCACAACCTATGACCCCC...GAAACGGCTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATGGGGGTCATAGGTTGTaGGCTGGCCTCTGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHGGHRL*AGLCLG
Trigger: GCCCAGACAGAGGCCAGCCCACAACCTATGACCCCC...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp AGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTCTCTGAAGTGACGAAGGAGTaGGGCCCCCGGACTCTGCTC +
Preference number: 2 (lower is better)
Translates to: SLPHHGPRHSPGPCLGFSEVTKE*GPRTLL
Trigger: GAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACTTC...AGAGAAGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp CCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACAAGGTGCGGTACAGGTaGGACTCCAGCTTCCGCCTC +
Preference number: 2 (lower is better)
Translates to: PWDPGVSTASLGSVSEPHKVRYR*DSSFRL
Trigger: GAGGCGGAAGCTGGAGTCCCACCTGTACCGCACCTT...GTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp AGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTCTCTCCCCACTGGACCGCATaGCGCTCACCAGGTCCAGTT +
Preference number: 2 (lower is better)
Translates to: SLPHHGPRHSPGPCLGFSPHWTA*RSPGPV
Trigger: AACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGG...AGAGAAGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp AGGAGAGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTGTCCCCATCGTCTTCTaGCTCCTCCTGCAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: RRACHTMVLAILQDPVWAVPIVF*LLLQGL
Trigger: CAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGAC...AGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR GCA 90 bp TTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGAAGAGGCTTCTCTGTaGCCTGCGGGATGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LGRFPLGPWRIHGISGISEEASL*PAGWRQ
Trigger: CTGCCTCCATCCCGCAGGGCACAGAGAAGCCTCTTC...ACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR GCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCATGGGAACGCCATTGTaGAGGAGGCCCTCCCGGGGC +
Preference number: 2 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPMGTPL*RRPSRG
Trigger: GCCCCGGGAGGGCCTCCTGCACAATGGCGTTCCCAT...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR GCA 90 bp AGTGACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCCAAACTCCTCCAAGGTaGGGTACAGGTGGGACTCCA +
Preference number: 2 (lower is better)
Translates to: SDEGVGPPDSAQVDHRTVQTPPR*GTGGTP
Trigger: TGGAGTCCCACCTGTACCGCACCTTGGAGGAGTTTG...GACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR GCA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATAAGCAGCTCCTTCAGCTaGACCTCTGGGGACAAATGG +
Preference number: 2 (lower is better)
Translates to: GEKAQSLAYHERGKLPAISSSFS*TSGDKW
Trigger: CCATTTGTCCCCAGAGGTGCAGCTGAAGGAGCTGCT...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR GCA 90 bp CTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACCTGCACTGACTTGCGGATGGTGGTGGTGGCTGTaGCAGCTTCTGCCGAAGGGC +
Preference number: 2 (lower is better)
Translates to: LCSGGSSHGHRPPALTCGWWWWL*QLLPKG
Trigger: GCCCTTCGGCAGAAGCTGGCACAGCCACCACCACCA...TCCGCAAGTCAGTGCAGGTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp CCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACTGCCGGCCATACATCTaGCAGGGGCAGAAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: PWDPGVSTASLGSVSEPHCRPYI*QGQKRL
Trigger: AAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCA...GTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCAAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAARKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 2 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATATTGGGTGGGAGTTTTTaGCACACAGCAGGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: GEKAQSLAYHERGKLPAILGGSF*HTAGLP
Trigger: TGGCAGGCCTGCTGTGTGCCAAAAACTCCCACCCAA...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTAGCAAGACTGGGCAATaGGTGCAGAAGATGGGACCG +
Preference number: 2 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGSKTGQ*VQKMGP
Trigger: CGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCT...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGAGCAAGACTGGGCAATaGGTGCAGAAGATGGGACCG +
Preference number: 2 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSSKTGQ*VQKMGP
Trigger: CGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCT...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGGGGGGTCATAGGTTGTaGGCTGGCCTCTGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWGGHRL*AGLCLG
Trigger: GCCCAGACAGAGGCCAGCCCACAACCTATGACCCCC...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTCCCTCGACATCCATGTaGACAGATGGACACTCGCAC +
Preference number: 2 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGPSTSM*TDGHSH
Trigger: GTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGG...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGCCGTTTCTCAGCGGCCTGCAACTaGCCCTGCGACTTTGGTGCT +
Preference number: 2 (lower is better)
Translates to: QTRQRHIGPVPQQDLSRFSAACN*PCDFGA
Trigger: AGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGA...GAAACGGCTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCCAGGACTTTGTCCCTTaGAAGCCACTGCCAGGTGCG +
Preference number: 2 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCQDFVP*KPLPGA
Trigger: CGCACCTGGCAGTGGCTTCCAAGGGACAAAGTCCTG...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR CCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCACCTCTGGGGACAAATaGGCCCGGTTCTCTGGGATG +
Preference number: 2 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLTSGDK*ARFSGM
Trigger: CATCCCAGAGAACCGGGCCCATTTGTCCCCAGAGGT...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR TCA 90 bp CCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACATAGGCCACCTGCACTaGCTTGCGGATGCTGGTCTT +
Preference number: 2 (lower is better)
Translates to: PWDPGVSTASLGSVSEPHIGHLH*LADAGL
Trigger: AAGACCAGCATCCGCAAGTCAGTGCAGGTGGCCTAT...GTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR TCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGTCTTCCAATTTGGGTaGCTCGGGCAGGTGAGTGCC +
Preference number: 2 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISVFQFG*LGQVSA
Trigger: GGCACTCACCTGCCCGAGTCACCCAAATTGGAAGAC...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR TCA 90 bp TCACTACAGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCCCGGTTCTCTGGGATaGGGATGTTGTCCACGTCTT +
Preference number: 2 (lower is better)
Translates to: SLQLLLLGRFREWRSSSMPGSLG*GCCPRL
Trigger: AAGACGTGGACAACATCCTCATCCCAGAGAACCGGG...CATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR GCA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCACTGCCAGGAGAACCATaGGATTGGTCAAAACTGGGG +
Preference number: 2 (lower is better)
Translates to: AQSLAYHERGKLPAIHLALPGEP*DWSKLG
Trigger: CCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAG...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR GCA 90 bp CCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCGAGCCCAGGACCTCTTaGCATCTGGGCAATCTCCTA +
Preference number: 2 (lower is better)
Translates to: PGTLAYPRHLWDQCRNLTEPRTS*HLGNLL
Trigger: TAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTC...GGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR GCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCTCCCTTGGAAGCCACTaGCAGGTGCGCTTGTTGTCA +
Preference number: 2 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLSLGSH*QVRLLS
Trigger: TGACAACAAGCGCACCTGGCAGTGGCTTCCAAGGGA...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR GCA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATATCCCTTGGAAGCCACTaGCAGGTGCGCTTGTTGTCA +
Preference number: 2 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVISLGSH*QVRLLS
Trigger: TGACAACAAGCGCACCTGGCAGTGGCTTCCAAGGGA...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
3UTR-3UTR GCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCCGCAGGCGGACAGCTaGTCGGTGGAAAATTGTGTC +
Preference number: 2 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHPQADS*SVENCV
Trigger: GACACAATTTTCCACCGAGCAGCTGTCCGCCTGCGG...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTTGCCGGCCATACATCTaGCAGGGGCAGAAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: HERGKLPAIHLAGAEEASCRPYI*QGQKRL
Trigger: AAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCA...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: RIHGISGISVGTSPALRCRKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 2 (lower is better)
Translates to: LAYHERGKLPAIHLAGAEAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTGGAGAACCATGCGATTaGTCAAAACTGGGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGGEPCD*SKLGPC
Trigger: GCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCC...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCCTGAGGGACCTTGGGTaGGAGTTTTTGGCACACAGC +
Preference number: 2 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCLRDLG*EFLAHS
Trigger: GCTGTGTGCCAAAAACTCCCACCCAAGGTCCCTCAG...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCCTGAGGGACCTTGGGTaGGAGTTTTTGGCACACAGC +
Preference number: 2 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLLRDLG*EFLAHS
Trigger: GCTGTGTGCCAAAAACTCCCACCCAAGGTCCCTCAG...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp TTCTTGAAGAGGACTGATGTGCGGCGACCCACACCACTAAGTGGGGTACCGGCCGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: FLKRTDVRRPTPLSGVPAGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...GGCCGGTACCCCACTTAGTGGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTAGGGGGTCATAGGTTGTaGGCTGGCCTCTGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLGGHRL*AGLCLG
Trigger: GCCCAGACAGAGGCCAGCCCACAACCTATGACCCCC...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp AGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCCACCCTGAAGGCTTaGACCACCTCGTGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: RSQSPQLTNYLGRGEALAPTLKA*TTSWQQ
Trigger: TTGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGG...AGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGCCGTTTCGGCCAGGAAGATGTTTaGTGGCAGGCGCCATGCCAT +
Preference number: 2 (lower is better)
Translates to: QTRQRHIGPVPQQDLSRFGQEDV*WQAPCH
Trigger: ATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCC...GAAACGGCTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACCTGCACTGACTTGCGGATCAGCGGCCTGCAACTaGCCCTGCGACTTTGGTGCT +
Preference number: 2 (lower is better)
Translates to: LCSGGSSHGHRPPALTCGSAACN*PCDFGA
Trigger: AGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGA...TCCGCAAGTCAGTGCAGGTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR CCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCGAAGTGACGAAGGAGTaGGGCCCCCGGACTCTGCTC +
Preference number: 2 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPEVTKE*GPRTLL
Trigger: GAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACTTC...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR CCA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTGAAGTGACGAAGGAGTaGGGCCCCCGGACTCTGCTC +
Preference number: 2 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTEVTKE*GPRTLL
Trigger: GAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACTTC...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR CCA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAAAGGTGCGGTACAGGTaGGACTCCAGCTTCCGCCTC +
Preference number: 2 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTKVRYR*DSSFRL
Trigger: GAGGCGGAAGCTGGAGTCCCACCTGTACCGCACCTT...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR CCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTACCTCTGGGGACAAATaGGCCCGGTTCTCTGGGATG +
Preference number: 2 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISTSGDK*ARFSGM
Trigger: CATCCCAGAGAACCGGGCCCATTTGTCCCCAGAGGT...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCGGCCGCTTCCGGGAGTaGCGCTCTTCCTCGATGCTG +
Preference number: 2 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVGRFRE*RSSSML
Trigger: CAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCC...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR TCA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGGCCTCTGTCTGGGCCTaGGGAGCCTGGCAGAGACAC +
Preference number: 2 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKRASVWA*GAWQRH
Trigger: GTGTCTCTGCCAGGCTCCTCAGGCCCAGACAGAGGC...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR GCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAACTGCCAGGAGAACCATaGGATTGGTCAAAACTGGGG +
Preference number: 2 (lower is better)
Translates to: LAYHERGKLPAIHLAGAELPGEP*DWSKLG
Trigger: CCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAG...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR GCA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCACTGCCAGGAGAACCATaGGATTGGTCAAAACTGGGG +
Preference number: 2 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAALPGEP*DWSKLG
Trigger: CCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAG...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR GCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATGAGCCCAGGACCTCTTaGCATCTGGGCAATCTCCTA +
Preference number: 2 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHEPRTS*HLGNLL
Trigger: TAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTC...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR GCA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTCTCACTACAGCTCCTaGTCCTTGGCCGCTTCCGGG +
Preference number: 2 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTSHYSS*SLAASG
Trigger: CCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGAGA...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCTGCCGGCCATACATCTaGCAGGGGCAGAAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: TQQACQENHAIGQNWGLACRPYI*QGQKRL
Trigger: AAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCA...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp AGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: RSQSPQLTNYLGRGEALARKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...AGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp AAGAGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTTGGGTGGGAGTTTTTaGCACACAGCAGGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: KRGPALIQGAHLQSWEVVLGGSF*HTAGLP
Trigger: TGGCAGGCCTGCTGTGTGCCAAAAACTCCCACCCAA...CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCTATCCACGGCATCTCTaGGATCAGTGTCGGAACCTC +
Preference number: 2 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCYPRHL*DQCRNL
Trigger: GAGGTTCCGACACTGATCCCAGAGATGCCGTGGATA...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp TCACTACAGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGTATCCACGGCATCTCTaGGATCAGTGTCGGAACCTC +
Preference number: 2 (lower is better)
Translates to: SLQLLLLGRFREWRSSSMYPRHL*DQCRNL
Trigger: GAGGTTCCGACACTGATCCCAGAGATGCCGTGGATA...CATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGGCACACTTGCAGAGCTaGGAAGTTGTGTCAACAGCT +
Preference number: 2 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSAHLQS*EVVSTA
Trigger: AGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGC...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp ATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAGGCCAGGAAGATGTTTaGTGGCAGGCGCCATGCCAT +
Preference number: 2 (lower is better)
Translates to: MAISGLQLALRLWCSGGEGQEDV*WQAPCH
Trigger: ATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCC...TTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTCAGGACTTTGTCCCTTaGAAGCCACTGCCAGGTGCG +
Preference number: 2 (lower is better)
Translates to: IHGISGISVGTSPALRCSQDFVP*KPLPGA
Trigger: CGCACCTGGCAGTGGCTTCCAAGGGACAAAGTCCTG...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR CCA 90 bp CTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACCTGCACTGACTTGCGGACAGGACTTTGTCCCTTaGAAGCCACTGCCAGGTGCG +
Preference number: 2 (lower is better)
Translates to: LCSGGSSHGHRPPALTCGQDFVP*KPLPGA
Trigger: CGCACCTGGCAGTGGCTTCCAAGGGACAAAGTCCTG...TCCGCAAGTCAGTGCAGGTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR CCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTATGGGCCCGGTTCTCTaGGATGAGGATGTTGTCCAC +
Preference number: 2 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISMGPVL*DEDVVH
Trigger: GTGGACAACATCCTCATCCCAGAGAACCGGGCCCAT...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp TTCACAGCAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGCTTCAGCTGCACCTCTaGGGACAAATGGGCCCGGTT +
Preference number: 2 (lower is better)
Translates to: FTADATETHRPRATAGSELQLHL*GQMGPV
Trigger: AACCGGGCCCATTTGTCCCCAGAGGTGCAGCTGAAG...CTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTGCTGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR CAA 90 bp CCGGCCGGGGTGTCAGGGGCCATGAGGGATAGTCTGTTGATGCCATaGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: PAGVSGAMRDSLLMP*SLSKRCKGSFPSCS
Trigger: ACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCATCAACAGACTATCCCTCATGGCCCCTGACACCCCGGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR TCA 90 bp GCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTGTCCCTGGCCTACCATaGGAGGGGGAAGCTGCCGGC +
Preference number: 2 (lower is better)
Translates to: ASVAKAHSLAAVVIFPRAVPGLP*EGEAAG
Trigger: GCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGAC...AGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR TCA 90 bp GCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGAGGGCAGACCCAGCTaGCGAGCACAGCTCCACACA +
Preference number: 2 (lower is better)
Translates to: ALIQGAHLQSWEVVSTAKEGRPS*RAQLHT
Trigger: TGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTC...TTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR TCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGATAGGCCACCTGCACTaGCTTGCGGATGCTGGTCTT +
Preference number: 2 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWIGHLH*LADAGL
Trigger: AAGACCAGCATCCGCAAGTCAGTGCAGGTGGCCTAT...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR GCA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCGAAGAGGCTTCTCTGTaGCCTGCGGGATGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVEEASL*PAGWRQ
Trigger: CTGCCTCCATCCCGCAGGGCACAGAGAAGCCTCTTC...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR GCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTGAGCCCAGGACCTCTTaGCATCTGGGCAATCTCCTA +
Preference number: 2 (lower is better)
Translates to: IHGISGISVGTSPALRCSEPRTS*HLGNLL
Trigger: TAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTC...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR GCA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTATGGCAATCAGCGGCCTaGAACTGGCCCTGCGACTTT +
Preference number: 2 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLWQSAA*NWPCDF
Trigger: AAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCA...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR GCA 90 bp AACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGAGAACACCGATGTTCTCTGCCTaGCGCCGGGCGTGCCGTAGG +
Preference number: 2 (lower is better)
Translates to: NWPCDFGAQEVKRNVQRTPMFSA*RRACRR
Trigger: CCTACGGCACGCCCGGCGGCAGGCAGAGAACATCGG...TGTTCTCTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR CCA 90 bp ATGCCATTGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTCTGTGCCCTGCGGGATaGAGGCAGGGCAAGCGGATG +
Preference number: 2 (lower is better)
Translates to: MPLSLSKRCKGSFPSCSGLCPAG*RQGKRM
Trigger: CATCCGCTTGCCCTGCCTCCATCCCGCAGGGCACAG...ACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCTGCCGGCCATACATCTaGCAGGGGCAGAAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPCRPYI*QGQKRL
Trigger: AAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCA...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPRKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 2 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACCTGCACTGACTTGCGGAGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 2 (lower is better)
Translates to: LCSGGSSHGHRPPALTCGAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...TCCGCAAGTCAGTGCAGGTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR CCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGGAGAACCATGCGATTaGTCAAAACTGGGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLGEPCD*SKLGPC
Trigger: GCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCC...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGTTGGGTGGGAGTTTTTaGCACACAGCAGGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWLGGSF*HTAGLP
Trigger: TGGCAGGCCTGCTGTGTGCCAAAAACTCCCACCCAA...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGCTGAGGGACCTTGGGTaGGAGTTTTTGGCACACAGC +
Preference number: 2 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWLRDLG*EFLAHS
Trigger: GCTGTGTGCCAAAAACTCCCACCCAAGGTCCCTCAG...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACATCCCCTGAGGGACCTTaGGTGGGAGTTTTTGGCACA +
Preference number: 2 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTSPEGP*VGVFGT
Trigger: TGTGCCAAAAACTCCCACCCAAGGTCCCTCAGGGGA...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp AGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: STAPHKPPSTSMWTDGHSGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...CGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATTTAGTGGGAGTAGGATaGAGCGGGCCAGGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDLVGVG*SGPGSP
Trigger: GGGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAA...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGGGGAGATTCCCCCTaGGACCCTGGCGTATCCACG +
Preference number: 2 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKRWGDSP*DPGVST
Trigger: CGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp CTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACCTGCACTGACTTGCGGACAGGAAGATGTTTGGTaGCAGGCGCCATGCCATCCA +
Preference number: 2 (lower is better)
Translates to: LCSGGSSHGHRPPALTCGQEDVW*QAPCHP
Trigger: TGGATGGCATGGCGCCTGCCACCAAACATCTTCCTG...TCCGCAAGTCAGTGCAGGTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR CCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGAAAAGTCTTCCAATTTaGGTGACTCGGGCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSKSLPI*VTRAGE
Trigger: CTCACCTGCCCGAGTCACCCAAATTGGAAGACTTTT...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR CCA 90 bp ATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAATGGGCCCGGTTCTCTaGGATGAGGATGTTGTCCAC +
Preference number: 2 (lower is better)
Translates to: MAISGLQLALRLWCSGGEMGPVL*DEDVVH
Trigger: GTGGACAACATCCTCATCCCAGAGAACCGGGCCCAT...TTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR CCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGTCCCCATCGTCTTCTaGCTCCTCCTGCAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLVPIVF*LLLQGL
Trigger: CAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGAC...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR TCA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCAAAAAGACCAGTGTGGTaGCGGTTTCTGTCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAAKRPVW*RFLSVW
Trigger: CCAAACTGACAGAAACCGTCACCACACTGGTCTTTT...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR TCA 90 bp CTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGGCCTCTGTCTGGGCCTaGGGAGCCTGGCAGAGACAC +
Preference number: 2 (lower is better)
Translates to: LSKRCKGSFPSCSGDFSKASVWA*GAWQRH
Trigger: GTGTCTCTGCCAGGCTCCTCAGGCCCAGACAGAGGC...CTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR TCA 90 bp TTCTTGAAGAGGACTGATGTGCGGCGACCCACACCACTAAGTGGGGTACCGGCCTACTGTCTTGTTGAGTaGTGGTGGCTGTGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: FLKRTDVRRPTPLSGVPAYCLVE*WWLWWW
Trigger: CCACCACCACAGCCACCATCACTCAACAAGACAGTA...GGCCGGTACCCCACTTAGTGGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR TCA 90 bp AAAGGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTGGATACTGTCTTGTTaGGTGATGGTGGCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: KGGRGQTQLTSTAPHKPPWILSC*VMVAVV
Trigger: CACCACAGCCACCATCACTCAACAAGACAGTATCCA...GGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR GCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGGAAGAGGCTTCTCTGTaGCCTGCGGGATGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: AETPPGIAAGLKGNETLKEEASL*PAGWRQ
Trigger: CTGCCTCCATCCCGCAGGGCACAGAGAAGCCTCTTC...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR GCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTGCCAGGAGAACCATaGGATTGGTCAAAACTGGGG +
Preference number: 2 (lower is better)
Translates to: TQQACQENHAIGQNWGLALPGEP*DWSKLG
Trigger: CCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAG...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR GCA 90 bp GCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGCCTGCAACTGGCCCTaGGACTTTGGTGCTCAGGAG +
Preference number: 2 (lower is better)
Translates to: ALIQGAHLQSWEVVSTAKACNWP*DFGAQE
Trigger: CTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC...TTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR GCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCCTCTGCCTGTTTCTaGTCTCCCAGCTTCAGCACG +
Preference number: 2 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLASACF*SPSFST
Trigger: CGTGCTGAAGCTGGGAGAGCAGAAACAGGCAGAGGC...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR GCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTATCCCTTGGAAGCCACTaGCAGGTGCGCTTGTTGTCA +
Preference number: 2 (lower is better)
Translates to: SRPARRTMRLVKTGALPLSLGSH*QVRLLS
Trigger: TGACAACAAGCGCACCTGGCAGTGGCTTCCAAGGGA...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
3UTR-3UTR CCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLRKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp GTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGGGAGAACCATGCGATTaGTCAAAACTGGGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: VVSTAKGKVCGWEVVSWGGEPCD*SKLGPC
Trigger: GCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCC...CCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAAC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCGGAGAACCATGCGATTaGTCAAAACTGGGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGGEPCD*SKLGPC
Trigger: GCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCC...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGTTGGGTGGGAGTTTTTaGCACACAGCAGGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWLGGSF*HTAGLP
Trigger: TGGCAGGCCTGCTGTGTGCCAAAAACTCCCACCCAA...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp ACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACATCCCCTGAGGGACCTTaGGTGGGAGTTTTTGGCACA +
Preference number: 2 (lower is better)
Translates to: TQLTSTAPHKPPSTSMWTSPEGP*VGVFGT
Trigger: TGTGCCAAAAACTCCCACCCAAGGTCCCTCAGGGGA...TGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGTTCCCCCTGGGACCCTaGCGTATCCACGGCATCTCT +
Preference number: 2 (lower is better)
Translates to: AETPPGIAAGLKGNETLKFPLGP*RIHGIS
Trigger: AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAA...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGGTCATAGGTTGTaGGCTGGCCTCTGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRGGHRL*AGLCLG
Trigger: GCCCAGACAGAGGCCAGCCCACAACCTATGACCCCC...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGCCCTCGACATCCATGTaGACAGATGGACACTCGCAC +
Preference number: 2 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWPSTSM*TDGHSH
Trigger: GTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGG...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGGCCATGCCATCCAGGTaGTGGAGAGTGAAGCTTAAG +
Preference number: 2 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWAMPSR*WRVKLK
Trigger: CTTAAGCTTCACTCTCCACCACCTGGATGGCATGGC...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTACAGGAAGATGTTTGGTaGCAGGCGCCATGCCATCCA +
Preference number: 2 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLQEDVW*QAPCHP
Trigger: TGGATGGCATGGCGCCTGCCACCAAACATCTTCCTG...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCGGCCAGGAAGATGTTTaGTGGCAGGCGCCATGCCAT +
Preference number: 2 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVGQEDV*WQAPCH
Trigger: ATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCC...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR CCA 90 bp ATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAATGCATTCCCTGGAGTTaGGAAGTGGGAGTAGCAGAG +
Preference number: 2 (lower is better)
Translates to: MAISGLQLALRLWCSGGECIPWS*EVGVAE
Trigger: CTCTGCTACTCCCACTTCCCAACTCCAGGGAATGCA...TTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CTCTGTCCCCATCGTCTTCTGGCTCCTCCTGCAAGGCCTGCTCCAGCACAGCTGCGGACAGCTGCTCGGTaGAAAATTGTGTCTTTAGCA +
Preference number: 2 (lower is better)
Translates to: LCPHRLLAPPARPAPAQLRTAAR*KIVSLA
Trigger: TGCTAAAGACACAATTTTCCACCGAGCAGCTGTCCG...CAGCTGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGAAAAGTCTTCCAATTTaGGTGACTCGGGCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVKSLPI*VTRAGE
Trigger: CTCACCTGCCCGAGTCACCCAAATTGGAAGACTTTT...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp GTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTGGGTGCGGGCCCCACTaGACCGCATGGCGCTCACCA +
Preference number: 2 (lower is better)
Translates to: VAKAHSLAAVVIFPRAHLGCGPH*TAWRSP
Trigger: TGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCC...AAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR TCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGGATAGGAGCCCACCCTaGAGGCTTGGACCACCTCGT +
Preference number: 2 (lower is better)
Translates to: RHCVATQWRTPVMETIGLDRSPP*RLGPPR
Trigger: ACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATC...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR TCA 90 bp AACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGAGAACAGAGGGCAGACCCAGCTaGCGAGCACAGCTCCACACA +
Preference number: 2 (lower is better)
Translates to: NWPCDFGAQEVKRNVQRTEGRPS*RAQLHT
Trigger: TGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTC...TGTTCTCTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR TCA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGGTCTTCCAATTTGGGTaGCTCGGGCAGGTGAGTGCC +
Preference number: 2 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKRVFQFG*LGQVSA
Trigger: GGCACTCACCTGCCCGAGTCACCCAAATTGGAAGAC...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR GCA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCGAGCCCAGGACCTCTTaGCATCTGGGCAATCTCCTA +
Preference number: 2 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVEPRTS*HLGNLL
Trigger: TAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTC...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR GCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTGAAGCCACTGCCAGGTaGGCTTGTTGTCAAAGAAGA +
Preference number: 2 (lower is better)
Translates to: IHGISGISVGTSPALRCSEATAR*ACCQRR
Trigger: TCTTCTTTGACAACAAGCGCACCTGGCAGTGGCTTC...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
3UTR-3UTR GCA 90 bp TTCTTGAAGAGGACTGATGTGCGGCGACCCACACCACTAAGTGGGGTACCGGCCGAAGCCACTGCCAGGTaGGCTTGTTGTCAAAGAAGA +
Preference number: 2 (lower is better)
Translates to: FLKRTDVRRPTPLSGVPAEATAR*ACCQRR
Trigger: TCTTCTTTGACAACAAGCGCACCTGGCAGTGGCTTC...GGCCGGTACCCCACTTAGTGGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532330.5
3UTR-3UTR CCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCTCCCCTGAGGGACCTTaGGTGGGAGTTTTTGGCACA +
Preference number: 2 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLSPEGP*VGVFGT
Trigger: TGTGCCAAAAACTCCCACCCAAGGTCCCTCAGGGGA...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCTATCCACGGCATCTCTaGGATCAGTGTCGGAACCTC +
Preference number: 2 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPYPRHL*DQCRNL
Trigger: GAGGTTCCGACACTGATCCCAGAGATGCCGTGGATA...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGCCCACCCTGAAGGCTTaGACCACCTCGTGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGPTLKA*TTSWQQ
Trigger: TTGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGG...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGATCAGCGGCCTGCAACTaGCCCTGCGACTTTGGTGCT +
Preference number: 2 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRSAACN*PCDFGA
Trigger: AGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGA...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGCCGTTTCTGTGTGGCCACACAATaGAGGACTCCAGTAATGGAA +
Preference number: 2 (lower is better)
Translates to: QTRQRHIGPVPQQDLSRFCVATQ*RTPVME
Trigger: TTCCATTACTGGAGTCCTCCATTGTGTGGCCACACA...GAAACGGCTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR CAA 90 bp ACCCTGTCTGGGCTTCTCTGTAGCTTAACCCCATTCTTGGCCTTCTaGAAGAGGACTGATGTGCGGCGACCCACACCACTAAGTGGGGTA +
Preference number: 2 (lower is better)
Translates to: TLSGLLCSLTPFLAF*KRTDVRRPTPLSGV
Trigger: TACCCCACTTAGTGGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAAGGCCAAGAATGGGGTTAAGCTACAGAGAAGCCCAGACAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CAA 90 bp TTCTCCAGGACCCTGTCTGGGCTTCTCTGTAGCTTAACCCCATTCTaGGCCTTCTTGAAGAGGACTGATGTGCGGCGACCCACACCACTA +
Preference number: 2 (lower is better)
Translates to: FSRTLSGLLCSLTPF*AFLKRTDVRRPTPL
Trigger: TAGTGGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAAGGCCAAGAATGGGGTTAAGCTACAGAGAAGCCCAGACAGGGTCCTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR TCA 90 bp CCAAACTACATTCAGAGTCAGACCCGCTTTCGGTGTGTTTTCCAAAGCCGTTGGGATAGGAGCCCACCCTaGAGGCTTGGACCACCTCGT +
Preference number: 2 (lower is better)
Translates to: PNYIQSQTRFRCVFQSRWDRSPP*RLGPPR
Trigger: ACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATC...CCAACGGCTTTGGAAAACACACCGAAAGCGGGTCTGACTCTGAATGTAGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR TCA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTACCAGGTGGTGGAGAGTaGAGCTTAAGACTGCAATTG +
Preference number: 2 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLPGGGE*SLRLQL
Trigger: CAATTGCAGTCTTAAGCTTCACTCTCCACCACCTGG...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR TCA 90 bp TTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGATAGGCCACCTGCACTaGCTTGCGGATGCTGGTCTT +
Preference number: 2 (lower is better)
Translates to: LQSWEVVSTAKGKVCGWEIGHLH*LADAGL
Trigger: AAGACCAGCATCCGCAAGTCAGTGCAGGTGGCCTAT...CTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR TCA 90 bp GCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGTACTGTCTTGTTGAGTaGTGGTGGCTGTGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: ACNWPCDFGAQEVKRNVQYCLVE*WWLWWW
Trigger: CCACCACCACAGCCACCATCACTCAACAAGACAGTA...CTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR GCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGGCCTCTGCCTGTTTCTaGTCTCCCAGCTTCAGCACG +
Preference number: 2 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGASACF*SPSFST
Trigger: CGTGCTGAAGCTGGGAGAGCAGAAACAGGCAGAGGC...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR GCA 90 bp GGGGCCATGAGGGATAGTCTGTTGATGCCATTGTCACTGAGCAAGCGTTGCAAAGGCTGTGCCAGCTTCTaGCGAAGGGCATTGATCTCC +
Preference number: 2 (lower is better)
Translates to: GAMRDSLLMPLSLSKRCKGCASF*RRALIS
Trigger: GGAGATCAATGCCCTTCGGCAGAAGCTGGCACAGCC...TTTGCAACGCTTGCTCAGTGACAATGGCATCAACAGACTATCCCTCATGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR GCA 90 bp GGGGCCATGAGGGATAGTCTGTTGATGCCATTGTCACTGAGCAAGCGTTGCAAATCTTCTGGCTCCTCCTaGAAGGCCTGCTCCAGCACA +
Preference number: 2 (lower is better)
Translates to: GAMRDSLLMPLSLSKRCKSSGSS*KACSST
Trigger: TGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGA...TTTGCAACGCTTGCTCAGTGACAATGGCATCAACAGACTATCCCTCATGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR GCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGACTCAGACAAGGAAGGTaGAGGCCCAGTGGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: IWERESKTGQWVQKMGPRLRQGR*RPSGLQ
Trigger: CTGGAGCCCACTGGGCCTGCACCTTCCTTGTCTGAG...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp GGGGCCATGAGGGATAGTCTGTTGATGCCATTGTCACTGAGCAAGCGTTGCAAAAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: GAMRDSLLMPLSLSKRCKRKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...TTTGCAACGCTTGCTCAGTGACAATGGCATCAACAGACTATCCCTCATGGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTTGGGTGGGAGTTTTTaGCACACAGCAGGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKRLGGSF*HTAGLP
Trigger: TGGCAGGCCTGCTGTGTGCCAAAAACTCCCACCCAA...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGCTGAGGGACCTTGGGTaGGAGTTTTTGGCACACAGC +
Preference number: 2 (lower is better)
Translates to: AETPPGIAAGLKGNETLKLRDLG*EFLAHS
Trigger: GCTGTGTGCCAAAAACTCCCACCCAAGGTCCCTCAG...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWEGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGGCACACTTGCAGAGCTaGGAAGTTGTGTCAACAGCT +
Preference number: 2 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWAHLQS*EVVSTA
Trigger: AGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGC...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCTGCATTCCCTGGAGTTaGGAAGTGGGAGTAGCAGAG +
Preference number: 2 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVCIPWS*EVGVAE
Trigger: CTCTGCTACTCCCACTTCCCAACTCCAGGGAATGCA...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR CCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGCTGGCCCTGCGACTTTaGTGCTCAGGAGGTGAAAAG +
Preference number: 2 (lower is better)
Translates to: AETPPGIAAGLKGNETLKLALRL*CSGGEK
Trigger: CTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAG...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp TTCTTGAAGAGGACTGATGTGCGGCGACCCACACCACTAAGTGGGGTACCGGCCCGGACAGCTGCTCGGTaGAAAATTGTGTCTTTAGCA +
Preference number: 2 (lower is better)
Translates to: FLKRTDVRRPTPLSGVPARTAAR*KIVSLA
Trigger: TGCTAAAGACACAATTTTCCACCGAGCAGCTGTCCG...GGCCGGTACCCCACTTAGTGGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGGGGTGCGGGCCCCACTaGACCGCATGGCGCTCACCA +
Preference number: 2 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKGCGPH*TAWRSP
Trigger: TGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCC...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp AGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTGTTTTCCAAAGCCGTTaGTCATGCCTGTCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: RSQSPQLTNYLGRGEALAVFQSR*SCLSLP
Trigger: AGGAAGAGACAGGCATGACCAACGGCTTTGGAAAAC...AGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR TCA 90 bp AGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTCTCTTGGCCTCAAGGGGAATaGGACATTAAAGAAAAAGAC +
Preference number: 2 (lower is better)
Translates to: SLPHHGPRHSPGPCLGFSWPQGE*DIKEKD
Trigger: GTCTTTTTCTTTAATGTCTCATTCCCCTTGAGGCCA...AGAGAAGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR GCA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATCTGCCAGGAGAACCATaGGATTGGTCAAAACTGGGG +
Preference number: 2 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDLPGEP*DWSKLG
Trigger: CCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAG...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR GCA 90 bp GCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAACTGCCAGGAGAACCATaGGATTGGTCAAAACTGGGG +
Preference number: 2 (lower is better)
Translates to: ALIQGAHLQSWEVVSTAKLPGEP*DWSKLG
Trigger: CCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAG...TTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR GCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGAGACTGGGCAATGGGTaGAGAAGATGGGACCGAGAA +
Preference number: 2 (lower is better)
Translates to: AETPPGIAAGLKGNETLKRLGNG*RRWDRE
Trigger: TTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCT...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATCTGTGCCCTGCGGGATaGAGGCAGGGCAAGCGGATG +
Preference number: 2 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYLCPAG*RQGKRM
Trigger: CATCCGCTTGCCCTGCCTCCATCCCGCAGGGCACAG...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGATTGGGTGGGAGTTTTTaGCACACAGCAGGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRLGGSF*HTAGLP
Trigger: TGGCAGGCCTGCTGTGTGCCAAAAACTCCCACCCAA...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCTTGGGTGGGAGTTTTTaGCACACAGCAGGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFLGGSF*HTAGLP
Trigger: TGGCAGGCCTGCTGTGTGCCAAAAACTCCCACCCAA...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp ATGCCATTGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTTCCCCTGAGGGACCTTaGGTGGGAGTTTTTGGCACA +
Preference number: 2 (lower is better)
Translates to: MPLSLSKRCKGSFPSCSGSPEGP*VGVFGT
Trigger: TGTGCCAAAAACTCCCACCCAAGGTCCCTCAGGGGA...ACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp GTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTTGGGGAGATTCCCCCTaGGACCCTGGCGTATCCACG +
Preference number: 2 (lower is better)
Translates to: VAKAHSLAAVVIFPRAHLWGDSP*DPGVST
Trigger: CGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA...AAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGCAGGAAGATGTTTGGTaGCAGGCGCCATGCCATCCA +
Preference number: 2 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGQEDVW*QAPCHP
Trigger: TGGATGGCATGGCGCCTGCCACCAAACATCTTCCTG...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp GGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACAGTAGAAAAATCCATTaGCTTGGATATGAATTCCAG +
Preference number: 2 (lower is better)
Translates to: GVGPPDSAQVDHRTVIGHSRKIH*LGYEFQ
Trigger: CTGGAATTCATATCCAAGCCAATGGATTTTTCTACT...GTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR TCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCAAAAGACCAGTGTGGTaGCGGTTTCTGTCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLKRPVW*RFLSVW
Trigger: CCAAACTGACAGAAACCGTCACCACACTGGTCTTTT...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR TCA 90 bp AAATCAACATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGAAAAGACCAGTGTGGTaGCGGTTTCTGTCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: KSTWQSAACNWPCDFGAQKRPVW*RFLSVW
Trigger: CCAAACTGACAGAAACCGTCACCACACTGGTCTTTT...CTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCATGTTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR TCA 90 bp GTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGTGGCCTCAAGGGGAATaGGACATTAAAGAAAAAGAC +
Preference number: 2 (lower is better)
Translates to: VVSTAKGKVCGWEVVSWGWPQGE*DIKEKD
Trigger: GTCTTTTTCTTTAATGTCTCATTCCCCTTGAGGCCA...CCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR TCA 90 bp AACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGAGAACACCCGGTTCTCTGGGATaGGGATGTTGTCCACGTCTT +
Preference number: 2 (lower is better)
Translates to: NWPCDFGAQEVKRNVQRTPGSLG*GCCPRL
Trigger: AAGACGTGGACAACATCCTCATCCCAGAGAACCGGG...TGTTCTCTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR CCA 90 bp CCCAAACTACATTCAGAGTCAGACCCGCTTTCGGTGTGTTTTCCAAAGCCGTTGGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 2 (lower is better)
Translates to: PKLHSESDPLSVCFPKPLAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...CAACGGCTTTGGAAAACACACCGAAAGCGGGTCTGACTCTGAATGTAGTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR CCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGAGAACCATGCGATTaGTCAAAACTGGGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRGEPCD*SKLGPC
Trigger: GCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCC...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTCCCCTGAGGGACCTTaGGTGGGAGTTTTTGGCACA +
Preference number: 2 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWESPEGP*VGVFGT
Trigger: TGTGCCAAAAACTCCCACCCAAGGTCCCTCAGGGGA...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATTTAGTGGGAGTAGGATaGAGCGGGCCAGGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYLVGVG*SGPGSP
Trigger: GGGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAA...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGTATCCACGGCATCTCTaGGATCAGTGTCGGAACCTC +
Preference number: 2 (lower is better)
Translates to: RHCVATQWRTPVMETIGLYPRHL*DQCRNL
Trigger: GAGGTTCCGACACTGATCCCAGAGATGCCGTGGATA...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp ATGCCATTGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTTATCCACGGCATCTCTaGGATCAGTGTCGGAACCTC +
Preference number: 2 (lower is better)
Translates to: MPLSLSKRCKGSFPSCSGYPRHL*DQCRNL
Trigger: GAGGTTCCGACACTGATCCCAGAGATGCCGTGGATA...ACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGCCATGCCATCCAGGTaGTGGAGAGTGAAGCTTAAG +
Preference number: 2 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRAMPSR*WRVKLK
Trigger: CTTAAGCTTCACTCTCCACCACCTGGATGGCATGGC...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGCCGTTTCAAGAAGAGAAAGTGTTaGGGGGAAGAGATAGACATA +
Preference number: 2 (lower is better)
Translates to: QTRQRHIGPVPQQDLSRFKKRKC*GEEIDI
Trigger: TATGTCTATCTCTTCCCCCCAACACTTTCTCTTCTT...GAAACGGCTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR TCA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTGGCCTCAAGGGGAATaGGACATTAAAGAAAAAGAC +
Preference number: 2 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTWPQGE*DIKEKD
Trigger: GTCTTTTTCTTTAATGTCTCATTCCCCTTGAGGCCA...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR TCA 90 bp TTCACAGCAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGAGGAGGCAGAGGGTTTaGAATAAAAGTAATGCATTC +
Preference number: 2 (lower is better)
Translates to: FTADATETHRPRATAGSERRQRV*NKSNAF
Trigger: GAATGCATTACTTTTATTTCAAACCCTCTGCCTCCT...CTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTGCTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
3UTR-3UTR TCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGCACAGAGTCCACAGCTaGCCAACTACCTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLHRVHS*PTTWGE
Trigger: CTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTG...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR GCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGAAGAGGCTTCTCTGTaGCCTGCGGGATGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: NQRHCVATQWRTPVMETIEEASL*PAGWRQ
Trigger: CTGCCTCCATCCCGCAGGGCACAGAGAAGCCTCTTC...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR GCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGACTGGGCAATGGGTaGAGAAGATGGGACCGAGAA +
Preference number: 2 (lower is better)
Translates to: IWERESKTGQWVQKMGPRRLGNG*RRWDRE
Trigger: TTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCT...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR GCA 90 bp GTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTGCCTCTGCCTGTTTCTaGTCTCCCAGCTTCAGCACG +
Preference number: 2 (lower is better)
Translates to: VAKAHSLAAVVIFPRAHLASACF*SPSFST
Trigger: CGTGCTGAAGCTGGGAGAGCAGAAACAGGCAGAGGC...AAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532330.5
3UTR-3UTR CCA 90 bp GTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTTGCCGGCCATACATCTaGCAGGGGCAGAAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: VAKAHSLAAVVIFPRAHLCRPYI*QGQKRL
Trigger: AAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCA...AAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp AACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGAGAACAGGAGAACCATGCGATTaGTCAAAACTGGGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: NWPCDFGAQEVKRNVQRTGEPCD*SKLGPC
Trigger: GCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCC...TGTTCTCTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGTTAGTGGGAGTAGGATaGAGCGGGCCAGGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQELVGVG*SGPGSP
Trigger: GGGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAA...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTTTAGTGGGAGTAGGATaGAGCGGGCCAGGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSLVGVG*SGPGSP
Trigger: GGGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAA...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGGGGGGTCATAGGTTGTaGGCTGGCCTCTGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKGGHRL*AGLCLG
Trigger: GCCCAGACAGAGGCCAGCCCACAACCTATGACCCCC...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGCACACTTGCAGAGCTaGGAAGTTGTGTCAACAGCT +
Preference number: 2 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRAHLQS*EVVSTA
Trigger: AGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGC...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGGCACACTTGCAGAGCTaGGAAGTTGTGTCAACAGCT +
Preference number: 2 (lower is better)
Translates to: RHCVATQWRTPVMETIGLAHLQS*EVVSTA
Trigger: AGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGC...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR GCA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATCCGCAGGCGGACAGCTaGTCGGTGGAAAATTGTGTC +
Preference number: 2 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYPQADS*SVENCV
Trigger: GACACAATTTTCCACCGAGCAGCTGTCCGCCTGCGG...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR CCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGTTCCCCCTGGGACCCTaGCGTATCCACGGCATCTCT +
Preference number: 2 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKFPLGP*RIHGIS
Trigger: AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAA...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGAGCAAGACTGGGCAATaGGTGCAGAAGATGGGACCG +
Preference number: 2 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLSKTGQ*VQKMGP
Trigger: CGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCT...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAGCAAGACTGGGCAATaGGTGCAGAAGATGGGACCG +
Preference number: 2 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGSKTGQ*VQKMGP
Trigger: CGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCT...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGACAGGAAGATGTTTGGTaGCAGGCGCCATGCCATCCA +
Preference number: 2 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGQEDVW*QAPCHP
Trigger: TGGATGGCATGGCGCCTGCCACCAAACATCTTCCTG...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGCCGTTTCGTTATAGTGTTTTGTTaGTTCCCTTTTAAACTCTGG +
Preference number: 2 (lower is better)
Translates to: QTRQRHIGPVPQQDLSRFVIVFC*FPFKLW
Trigger: CCAGAGTTTAAAAGGGAACCAACAAAACACTATAAC...GAAACGGCTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR TCA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGACTTCTTGAAGAGGACTaGTGTGCGGCGACCCACACC +
Preference number: 2 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRLLEED*CAATHT
Trigger: GGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAAG...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR GCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGAGCCCAGGACCTCTTaGCATCTGGGCAATCTCCTA +
Preference number: 2 (lower is better)
Translates to: NQRHCVATQWRTPVMETIEPRTS*HLGNLL
Trigger: TAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTC...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR GCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGATGGGCTTTAGGAACCTaGTTGGAGGTTTGCTATCAT +
Preference number: 2 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRWALGT*LEVCYH
Trigger: ATGATAGCAAACCTCCAAGCAGGTTCCTAAAGCCCA...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR CCA 90 bp AGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 2 (lower is better)
Translates to: REEVPRSYNTGLDKGHRVAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...GACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp AGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCTCCCCTGAGGGACCTTaGGTGGGAGTTTTTGGCACA +
Preference number: 2 (lower is better)
Translates to: REEVPRSYNTGLDKGHRVSPEGP*VGVFGT
Trigger: TGTGCCAAAAACTCCCACCCAAGGTCCCTCAGGGGA...GACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGTATCCACGGCATCTCTaGGATCAGTGTCGGAACCTC +
Preference number: 2 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLYPRHL*DQCRNL
Trigger: GAGGTTCCGACACTGATCCCAGAGATGCCGTGGATA...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp AACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGAGAACAATGCCATCCAGGTGGTaGAGAGTGAAGCTTAAGACT +
Preference number: 2 (lower is better)
Translates to: NWPCDFGAQEVKRNVQRTMPSRW*RVKLKT
Trigger: AGTCTTAAGCTTCACTCTCCACCACCTGGATGGCAT...TGTTCTCTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGGGCCAGGAAGATGTTTaGTGGCAGGCGCCATGCCAT +
Preference number: 2 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEGQEDV*WQAPCH
Trigger: ATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCC...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp AGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCCTGGCCCTGCGACTTTaGTGCTCAGGAGGTGAAAAG +
Preference number: 2 (lower is better)
Translates to: REEVPRSYNTGLDKGHRVLALRL*CSGGEK
Trigger: CTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAG...GACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp ATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAATGTATAAGAAGTTGTaGTGGTTGGTTGGTTGTATT +
Preference number: 2 (lower is better)
Translates to: MAISGLQLALRLWCSGGEMYKKL*WLVGCI
Trigger: AATACAACCAACCAACCACCACAACTTCTTATACAT...TTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR TCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGCCAGGTGGTGGAGAGTaGAGCTTAAGACTGCAATTG +
Preference number: 2 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLPGGGE*SLRLQL
Trigger: CAATTGCAGTCTTAAGCTTCACTCTCCACCACCTGG...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR TCA 90 bp AAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTCTTCCATGGATACTGTCTTGTTaGGTGATGGTGGCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: KAHSLAAVVIFPRAHLLPWILSC*VMVAVV
Trigger: CACCACAGCCACCATCACTCAACAAGACAGTATCCA...TGGAAGAAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR GCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGCAAACTCCTCCAAGGTaGGGTACAGGTGGGACTCCA +
Preference number: 2 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKQTPPR*GTGGTP
Trigger: TGGAGTCCCACCTGTACCGCACCTTGGAGGAGTTTG...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CCA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCAAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSRKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCTGGCCCTGCGACTTTaGTGCTCAGGAGGTGAAAAG +
Preference number: 2 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSLALRL*CSGGEK
Trigger: CTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAG...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGGACTTTGTCCCTTaGAAGCCACTGCCAGGTGCG +
Preference number: 2 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSQDFVP*KPLPGA
Trigger: CGCACCTGGCAGTGGCTTCCAAGGGACAAAGTCCTG...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR CCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAAGTAGAAAAATCCATTaGCTTGGATATGAATTCCAG +
Preference number: 2 (lower is better)
Translates to: SRPARRTMRLVKTGALPLSRKIH*LGYEFQ
Trigger: CTGGAATTCATATCCAAGCCAATGGATTTTTCTACT...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR TCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGGAGGCAGAGGGTTTaGAATAAAAGTAATGCATTC +
Preference number: 2 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGRRQRV*NKSNAF
Trigger: GAATGCATTACTTTTATTTCAAACCCTCTGCCTCCT...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR GCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGCTGCCAGGAGAACCATaGGATTGGTCAAAACTGGGG +
Preference number: 2 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQELPGEP*DWSKLG
Trigger: CCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAG...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR GCA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCAGAGCCCAGGACCTCTTaGCATCTGGGCAATCTCCTA +
Preference number: 2 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSEPRTS*HLGNLL
Trigger: TAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTC...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR GCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATATTGGAAGCCACTGCCTaGAAGCTTCAAATGCCAGTC +
Preference number: 2 (lower is better)
Translates to: NQRHCVATQWRTPVMETILEATA*KLQMPV
Trigger: GACTGGCATTTGAAGCTTGCAGGCAGTGGCTTCCAA...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR CCA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAATGCCATCCAGGTGGTaGAGAGTGAAGCTTAAGACT +
Preference number: 2 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGMPSRW*RVKLKT
Trigger: AGTCTTAAGCTTCACTCTCCACCACCTGGATGGCAT...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGGAAGATGTTTGGTaGCAGGCGCCATGCCATCCA +
Preference number: 2 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSQEDVW*QAPCHP
Trigger: TGGATGGCATGGCGCCTGCCACCAAACATCTTCCTG...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGGCACACTTGCAGAGCTaGGAAGTTGTGTCAACAGCT +
Preference number: 2 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEAHLQS*EVVSTA
Trigger: AGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGC...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGATCAACGACACTGTGTaGCCACACAATGGAGGACTC +
Preference number: 2 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEINDTV*PHNGGL
Trigger: GAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGAT...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGAAGAAGAGAAAGTGTTaGGGGGAAGAGATAGACATA +
Preference number: 2 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLKKRKC*GEEIDI
Trigger: TATGTCTATCTCTTCCCCCCAACACTTTCTCTTCTT...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR TCA 90 bp AGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGGTGGCCTCAAGGGGAATaGGACATTAAAGAAAAAGAC +
Preference number: 2 (lower is better)
Translates to: RVKLKTAIAEKVHEERRRWPQGE*DIKEKD
Trigger: GTCTTTTTCTTTAATGTCTCATTCCCCTTGAGGCCA...CCTTCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR CCA 72 bp CGATGTTCTCTGCCTGCCGCCGGGCGTGCCGTAGGATaGCCCCTCCCAGGTCCCGCAGGCGGACAGCTGCTC +
Preference number: 3 (lower is better)
Translates to: RCSLPAAGRAVG*PLPGPAGGQLL
Trigger: GAGCAGCTGTCCGCCTGCGGGACCTGGGAGGGGCCATCCTACGGCACGCCCGGCGGCAGGCAGAGAACATCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CCA 72 bp GGCGTAGCAGGCGGACACGACGGGTGCGGGCCCCACTaGACCGCATGGCGCTCACCAGGTCCAGTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: GVAGGHDGCGPH*TAWRSPGPVSP
Trigger: TGGAGAAACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGCTACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CAA 90 bp CCCTTCGCTCTCACTACAGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCGGGATGGGAACGCCATaGTGCAGGAGGCCCTCCCGG +
Preference number: 3 (lower is better)
Translates to: PFALTTAPAPWPLPGVALGMGTP*CRRPSR
Trigger: CCGGGAGGGCCTCCTGCACAATGGCGTTCCCATCCC...GAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGAGAGCGAAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532330.5
3UTR TCA 72 bp GTGGTGGTGGCTGTGCCAGCTTCTGCCGAAGGGCATTaGTCTCCCGGCGTAGCAGGCGGACACGACGGGTGC +
Preference number: 3 (lower is better)
Translates to: VVVAVPASAEGH*SPGVAGGHDGC
Trigger: GCACCCGTCGTGTCCGCCTGCTACGCCGGGAGATCAATGCCCTTCGGCAGAAGCTGGCACAGCCACCACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CCA 72 bp CCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCTGGCTaGAGAGGCAGGAGAGCCTGCCACACCATGGTCCTC +
Preference number: 3 (lower is better)
Translates to: PLPGVALFLDAG*RGRRACHTMVL
Trigger: GAGGACCATGGTGTGGCAGGCTCTCCTGCCTCTCCAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CAA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGGGGATGGGAACGCCATaGTGCAGGAGGCCCTCCCGG +
Preference number: 3 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVGMGTP*CRRPSR
Trigger: CCGGGAGGGCCTCCTGCACAATGGCGTTCCCATCCC...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
3UTR CCA 72 bp TTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCTaGCTGGAGAGGCAGGAGAGCCTGCCACACCATGGT +
Preference number: 3 (lower is better)
Translates to: LAASGSGALPRC*LERQESLPHHG
Trigger: ACCATGGTGTGGCAGGCTCTCCTGCCTCTCCAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CAA 90 bp CAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGCCGTTTCGGGATGGGAACGCCATaGTGCAGGAGGCCCTCCCGG +
Preference number: 3 (lower is better)
Translates to: QTRQRHIGPVPQQDLSRFGMGTP*CRRPSR
Trigger: CCGGGAGGGCCTCCTGCACAATGGCGTTCCCATCCC...GAAACGGCTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR CAA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTGCCACCTGCACTGACTaGCGGATGCTGGTCTTGCGG +
Preference number: 3 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGATCTD*RMLVLR
Trigger: CCGCAAGACCAGCATCCGCAAGTCAGTGCAGGTGGC...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
3UTR CCA 72 bp ATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTaGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTG +
Preference number: 3 (lower is better)
Translates to: IPPGTLAYPRHL*DQCRNLTRPEV
Trigger: CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR CCA 72 bp TCACTACAGCTCCTGCTCCTTGGCCGCTTCCGGGAGTaGCGCTCTTCCTCGATGCTGGCTGGAGAGGCAGGA +
Preference number: 3 (lower is better)
Translates to: SLQLLLLGRFRE*RSSSMLAGEAG
Trigger: TCCTGCCTCTCCAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CCA 72 bp CCTCTCCCCTTCGCTCTCACTACAGCTCCTGCTCCTTaGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCT +
Preference number: 3 (lower is better)
Translates to: PLPFALTTAPAP*PLPGVALFLDA
Trigger: AGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGAGAGCGAAGGGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CAA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCAAGAGGGGACCCGCCTaGATCCAGGGGGCACACTTG +
Preference number: 3 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLKRGPA*IQGAHL
Trigger: CAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp CTCTGTCCCCATCGTCTTCTGGCTCCTCCTGCAAGGCCTGCTCCAGCACAGCTGGGAGCCCAGGACCTCTaGCCATCTGGGCAATCTCCT +
Preference number: 3 (lower is better)
Translates to: LCPHRLLAPPARPAPAQLGAQDL*PSGQSP
Trigger: AGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCC...CAGCTGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CAA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGATCCAGGGGGCACACTaGCAGAGCTGGGAAGTTGTG +
Preference number: 3 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSIQGAH*QSWEVV
Trigger: CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGAT...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAAGGCCAGGAAGATGTTaGGTGGCAGGCGCCATGCCA +
Preference number: 3 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVIRPGRC*VAGAMP
Trigger: TGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCT...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR CAA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGCCCTCCCGGGGCATCTaGGGATCGATGATCAAGGCA +
Preference number: 3 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVPSRGI*GSMIKA
Trigger: TGCCTTGATCATCGATCCCAAGATGCCCCGGGAGGG...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441730.2
3UTR GCA 72 bp CTCTTCCTCGATGCTGGCTGGAGAGGCAGGAGAGCCTaGCACACCATGGTCCTCGCCATTCTCCAGGACCCT +
Preference number: 3 (lower is better)
Translates to: LFLDAGWRGRRA*HTMVLAILQDP
Trigger: AGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCTCCAGCCAGCATCGAGGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CAA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATGGAGCCCAGGACCTCTaGCCATCTGGGCAATCTCCT +
Preference number: 3 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHGAQDL*PSGQSP
Trigger: AGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCC...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CAA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAAGGAGCCCAGGACCTCTaGCCATCTGGGCAATCTCCT +
Preference number: 3 (lower is better)
Translates to: DSPWDPGVSTASLGSVSEGAQDL*PSGQSP
Trigger: AGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCC...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CAA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAAAGAGGGGACCCGCCTaGATCCAGGGGGCACACTTG +
Preference number: 3 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTKRGPA*IQGAHL
Trigger: CAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp GGGCTCCAGGGTTGGCGGAGGAGGCAGTTTGGAGTCATCTCTGTCCCCATCGTCCGGCCTTCCAGCATCTaGAGCTTGTCCACGGTGTCT +
Preference number: 3 (lower is better)
Translates to: GLQGWRRRQFGVISVPIVRPSSI*SLSTVS
Trigger: AGACACCGTGGACAAGCTCAAGATGCTGGAAGGCCG...GACGATGGGGACAGAGATGACTCCAAACTGCCTCCTCCGCCAACCCTGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CAA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCGCCACCTGCACTGACTaGCGGATGCTGGTCTTGCGG +
Preference number: 3 (lower is better)
Translates to: TQQACQENHAIGQNWGLAATCTD*RMLVLR
Trigger: CCGCAAGACCAGCATCCGCAAGTCAGTGCAGGTGGC...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR TCA 72 bp GCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTaGGGTGTAGTTAGTGGGAGTAGGATGGAGCGGGCC +
Preference number: 3 (lower is better)
Translates to: ASLGSVSEPHPP*GVVSGSRMERA
Trigger: GGCCCGCTCCATCCTACTCCCACTAACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CAA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCGGAGCCCAGGACCTCTaGCCATCTGGGCAATCTCCT +
Preference number: 3 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGGAQDL*PSGQSP
Trigger: AGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCC...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CAA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAAGGCCAGGAAGATGTTaGGTGGCAGGCGCCATGCCA +
Preference number: 3 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTRPGRC*VAGAMP
Trigger: TGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCT...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp GAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCTCCAGCATCTTGAGCTaGTCCACGGTGTCTTCCACA +
Preference number: 3 (lower is better)
Translates to: EGVGPPDSAQVDHRTVIGSSILS*STVSST
Trigger: TGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGA...GCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR TCA 72 bp CAGGTGGATCATCGCACGGTCATAGGCCACCTGCACTaGCTTGCGGATGCTGGTCTTGCGGCCTTCCAGCAT +
Preference number: 3 (lower is better)
Translates to: QVDHRTVIGHLH*LADAGLAAFQH
Trigger: ATGCTGGAAGGCCGCAAGACCAGCATCCGCAAGTCAGTGCAGGTGGCCTATGACCGTGCGATGATCCACCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR TCA 72 bp GCACCTCTGGGGACAAATGGGCCCGGTTCTCTGGGATaGGGATGTTGTCCACGTCTTCCCAGGAGAAGCGGT +
Preference number: 3 (lower is better)
Translates to: APLGTNGPGSLG*GCCPRLPRRSG
Trigger: ACCGCTTCTCCTGGGAAGACGTGGACAACATCCTCATCCCAGAGAACCGGGCCCATTTGTCCCCAGAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CCA 72 bp CAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGGGAGAAAGCCCAGTCC +
Preference number: 3 (lower is better)
Translates to: QACQENHAIGQN*GLALSGEKAQS
Trigger: GGACTGGGCTTTCTCCCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR CCA 72 bp TCCAGCAGCTCCTTCAGCTGCACCTCTGGGGACAAATaGGCCCGGTTCTCTGGGATGAGGATGTTGTCCACG +
Preference number: 3 (lower is better)
Translates to: SSSSFSCTSGDK*ARFSGMRMLST
Trigger: CGTGGACAACATCCTCATCCCAGAGAACCGGGCCCATTTGTCCCCAGAGGTGCAGCTGAAGGAGCTGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CCA 72 bp AGGCAGTTTGGAGTCATCTCTGTCCCCATCGTCTTCTaGCTCCTCCTGCAAGGCCTGCTCCAGCACAGCTGC +
Preference number: 3 (lower is better)
Translates to: RQFGVISVPIVF*LLLQGLLQHSC
Trigger: GCAGCTGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGACAGAGATGACTCCAAACTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CAA 90 bp ATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAACGGCCTTCCAGCATCTaGAGCTTGTCCACGGTGTCT +
Preference number: 3 (lower is better)
Translates to: MAISGLQLALRLWCSGGERPSSI*SLSTVS
Trigger: AGACACCGTGGACAAGCTCAAGATGCTGGAAGGCCG...TTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR CAA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCGCCACCTGCACTGACTaGCGGATGCTGGTCTTGCGG +
Preference number: 3 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVATCTD*RMLVLR
Trigger: CCGCAAGACCAGCATCCGCAAGTCAGTGCAGGTGGC...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR CAA 90 bp GTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGAGGAGGAGAACCATGCGATaGGTCAAAACTGGGGCCTTG +
Preference number: 3 (lower is better)
Translates to: VSTAKGKVCGWEVVSWGRRRTMR*VKTGAL
Trigger: CAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCT...CCTCCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAATCCAGCATCTTGAGCTaGTCCACGGTGTCTTCCACA +
Preference number: 3 (lower is better)
Translates to: DSPWDPGVSTASLGSVSESSILS*STVSST
Trigger: TGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGA...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR-3UTR CAA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTCGGCCTTCCAGCATCTaGAGCTTGTCCACGGTGTCT +
Preference number: 3 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTRPSSI*SLSTVS
Trigger: AGACACCGTGGACAAGCTCAAGATGCTGGAAGGCCG...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR TCA 72 bp GGACACTCGCACACCCAGCCTGATAGGAGCCCACCCTaGAGGCTTGGACCACCTCGTGGCAGCAAAGAAAAA +
Preference number: 3 (lower is better)
Translates to: GHSHTQPDRSPP*RLGPPRGSKEK
Trigger: TTTTTCTTTGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR CCA 72 bp CAGCTGCACCTCTGGGGACAAATGGGCCCGGTTCTCTaGGATGAGGATGTTGTCCACGTCTTCCCAGGAGAA +
Preference number: 3 (lower is better)
Translates to: QLHLWGQMGPVL*DEDVVHVFPGE
Trigger: TTCTCCTGGGAAGACGTGGACAACATCCTCATCCCAGAGAACCGGGCCCATTTGTCCCCAGAGGTGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CAA 90 bp AAAGGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTGCAGAGCTGGGAAGTaGTGTCAACAGCTAAAGGGA +
Preference number: 3 (lower is better)
Translates to: KGGRGQTQLTSTAPHKPPCRAGK*CQQLKG
Trigger: TCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCA...GGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAAGAGGGGACCCGCCTaGATCCAGGGGGCACACTTG +
Preference number: 3 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGKRGPA*IQGAHL
Trigger: CAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCGCCACCTGCACTGACTaGCGGATGCTGGTCTTGCGG +
Preference number: 3 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFATCTD*RMLVLR
Trigger: CCGCAAGACCAGCATCCGCAAGTCAGTGCAGGTGGC...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR CCA 72 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTaGGAAGTTGTGTCAACAGCTAAAGGGAAGGTCTGT +
Preference number: 3 (lower is better)
Translates to: GPALIQGAHLQS*EVVSTAKGKVC
Trigger: ACAGACCTTCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGAGCCCAGGACCTCTaGCCATCTGGGCAATCTCCT +
Preference number: 3 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRGAQDL*PSGQSP
Trigger: AGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCC...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR GCA 72 bp AAAAGTCTTCCAATTTGGGTGACTCGGGCAGGTGAGTaGCCCTCTCGGGGTCATAGCCGATGTTCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: KSLPIWVTRAGE*PSRGHSRCSLP
Trigger: AGGCAGAGAACATCGGCTATGACCCCGAGAGGGGCACTCACCTGCCCGAGTCACCCAAATTGGAAGACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CCA 72 bp CCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACT +
Preference number: 3 (lower is better)
Translates to: PRTSCHLGNLLS*AQAPQLFLLLT
Trigger: AGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CAA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTATGCAGAGCTGGGAAGTaGTGTCAACAGCTAAAGGGA +
Preference number: 3 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLCRAGK*CQQLKG
Trigger: TCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCA...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGCCATTGGATACTGTCTaGTTGAGTGATGGTGGCTGT +
Preference number: 3 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWPLDTV*LSDGGC
Trigger: ACAGCCACCATCACTCAACAAGACAGTATCCAATGG...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR TCA 72 bp AACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTaGCCAACTACCTGGGGAGAGGGGAAGCACTGGCTC +
Preference number: 3 (lower is better)
Translates to: NTGLDKGHRVHS*PTTWGEGKHWL
Trigger: GAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR CCA 72 bp ATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTaGTGCTCAGGAGGTGAAAAGAAATGTCCAGAGAAC +
Preference number: 3 (lower is better)
Translates to: MAISGLQLALRL*CSGGEKKCPEN
Trigger: GTTCTCTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAAGAGGGGACCCGCCTaGATCCAGGGGGCACACTTG +
Preference number: 3 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGKRGPA*IQGAHL
Trigger: CAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp TTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGATGCATTCCCTGGAGTaGGGAAGTGGGAGTAGCAGA +
Preference number: 3 (lower is better)
Translates to: LQSWEVVSTAKGKVCGWEMHSLE*GSGSSR
Trigger: TCTGCTACTCCCACTTCCCAACTCCAGGGAATGCAT...CTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp TTCACAGCAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGGAAAGTTGTGTTGGTTaGTCAGTCAGCATTCCCCAT +
Preference number: 3 (lower is better)
Translates to: FTADATETHRPRATAGSEESCVG*SVSIPH
Trigger: ATGGGGAATGCTGACTGACAAACCAACACAACTTTC...CTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTGCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
3UTR-3UTR CAA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGTCCAGCATCTTGAGCTaGTCCACGGTGTCTTCCACA +
Preference number: 3 (lower is better)
Translates to: AETPPGIAAGLKGNETLKSSILS*STVSST
Trigger: TGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGA...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR TCA 72 bp GCCACTGCCTGCAAGCTTCAAATGCCAGTCCACCACTaGGACCCAAACTACATTCAGAGTCAGACCCGCTTT +
Preference number: 3 (lower is better)
Translates to: ATACKLQMPVHH*DPNYIQSQTRF
Trigger: AAAGCGGGTCTGACTCTGAATGTAGTTTGGGTCTCAGTGGTGGACTGGCATTTGAAGCTTGCAGGCAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR CCA 72 bp GGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTaGTGGAGAGTGAAGCTTAAGACTGCAATTGCAGAA +
Preference number: 3 (lower is better)
Translates to: GRCLVAGAMPSR*WRVKLKTAIAE
Trigger: TTCTGCAATTGCAGTCTTAAGCTTCACTCTCCACCACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGGAGAACCATGCGATaGGTCAAAACTGGGGCCTTG +
Preference number: 3 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGRRTMR*VKTGAL
Trigger: CAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCT...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGTGCAGAGCTGGGAAGTaGTGTCAACAGCTAAAGGGA +
Preference number: 3 (lower is better)
Translates to: AETPPGIAAGLKGNETLKCRAGK*CQQLKG
Trigger: TCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCA...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGTCCAGCATCTTGAGCTaGTCCACGGTGTCTTCCACA +
Preference number: 3 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGSSILS*STVSST
Trigger: TGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGA...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR CAA 90 bp GCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTTCTGGGATGAGGATGTaGTCCACGTCTTCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: ASVAKAHSLAAVVIFPRASGMRM*STSSQE
Trigger: CTCCTGGGAAGACGTGGACAACATCCTCATCCCAGA...AGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CAA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGGAGAACCATGCGATaGGTCAAAACTGGGGCCTTG +
Preference number: 3 (lower is better)
Translates to: IWERESKTGQWVQKMGPRRRTMR*VKTGAL
Trigger: CAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCT...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR-3UTR CAA 90 bp AACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGAGAACAAGGAGAACCATGCGATaGGTCAAAACTGGGGCCTTG +
Preference number: 3 (lower is better)
Translates to: NWPCDFGAQEVKRNVQRTRRTMR*VKTGAL
Trigger: CAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCT...TGTTCTCTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAATCCAGGGGGCACACTaGCAGAGCTGGGAAGTTGTG +
Preference number: 3 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGIQGAH*QSWEVV
Trigger: CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGAT...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAAGAGGGGACCCGCCTaGATCCAGGGGGCACACTTG +
Preference number: 3 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRKRGPA*IQGAHL
Trigger: CAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp AGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCAGGCCAGGAAGATGTTaGGTGGCAGGCGCCATGCCA +
Preference number: 3 (lower is better)
Translates to: REEVPRSYNTGLDKGHRVRPGRC*VAGAMP
Trigger: TGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCT...GACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp AGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCAAATGTATAAGAAGTaGTGGTGGTTGGTTGGTTGT +
Preference number: 3 (lower is better)
Translates to: RSQSPQLTNYLGRGEALAQMYKK*WWLVGC
Trigger: ACAACCAACCAACCACCACAACTTCTTATACATTTG...AGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp AGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGGGCCACCTGCACTGACTaGCGGATGCTGGTCTTGCGG +
Preference number: 3 (lower is better)
Translates to: RVKLKTAIAEKVHEERRRATCTD*RMLVLR
Trigger: CCGCAAGACCAGCATCCGCAAGTCAGTGCAGGTGGC...CCTTCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
3UTR-3UTR CAA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGAACCTGCTTGGAGGTTaGCTATCATTAATGGGTTTC +
Preference number: 3 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWNLLGG*LSLMGF
Trigger: GAAACCCATTAATGATAGCAAACCTCCAAGCAGGTT...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR GCA 72 bp AAATCAACATGGCAATCAGCGGCCTGCAACTGGCCCTaGGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTC +
Preference number: 3 (lower is better)
Translates to: KSTWQSAACNWP*DFGAQEVKRNV
Trigger: GACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCATGTTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp AGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGGGGAGCCCAGGACCTCTaGCCATCTGGGCAATCTCCT +
Preference number: 3 (lower is better)
Translates to: RVKLKTAIAEKVHEERRRGAQDL*PSGQSP
Trigger: AGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCC...CCTTCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTAGGCCAGGAAGATGTTaGGTGGCAGGCGCCATGCCA +
Preference number: 3 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSRPGRC*VAGAMP
Trigger: TGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCT...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp GTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTTCTGGGATGAGGATGTaGTCCACGTCTTCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: VAKAHSLAAVVIFPRAHLSGMRM*STSSQE
Trigger: CTCCTGGGAAGACGTGGACAACATCCTCATCCCAGA...AAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CAA 90 bp CCCAAACTACATTCAGAGTCAGACCCGCTTTCGGTGTGTTTTCCAAAGCCGTTGAGTCTGTTGATGCCATaGTCACTGAGCAAGCGTTGC +
Preference number: 3 (lower is better)
Translates to: PKLHSESDPLSVCFPKPLSLLMP*SLSKRC
Trigger: GCAACGCTTGCTCAGTGACAATGGCATCAACAGACT...CAACGGCTTTGGAAAACACACCGAAAGCGGGTCTGACTCTGAATGTAGTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR CCA 72 bp AGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTGGTaGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAA +
Preference number: 3 (lower is better)
Translates to: RCLVAGAMPSRW*RVKLKTAIAEK
Trigger: TTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCACCACCTGGATGGCATGGCGCCTGCCACCAAACATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp AAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTCTTCCAAGGAGAACCATGCGATaGGTCAAAACTGGGGCCTTG +
Preference number: 3 (lower is better)
Translates to: KAHSLAAVVIFPRAHLLPRRTMR*VKTGAL
Trigger: CAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCT...TGGAAGAAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR-3UTR CAA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGATGCATTCCCTGGAGTaGGGAAGTGGGAGTAGCAGA +
Preference number: 3 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLMHSLE*GSGSSR
Trigger: TCTGCTACTCCCACTTCCCAACTCCAGGGAATGCAT...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGGAAAGTTGTGTTGGTTaGTCAGTCAGCATTCCCCAT +
Preference number: 3 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGESCVG*SVSIPH
Trigger: ATGGGGAATGCTGACTGACAAACCAACACAACTTTC...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR GCA 72 bp TCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTaGAGTGGTGATTTTTCCAAGAGCTCATCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: SLSKRCKGSFPS*SGDFSKSSSSS
Trigger: GGAAGAAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CCA 72 bp AAAGGAATATGGGAAAGAGAAAGCAAGACTGGGCAATaGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGA +
Preference number: 3 (lower is better)
Translates to: KGIWERESKTGQ*VQKMGPRRGVR
Trigger: TCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATATTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
3UTR GCA 72 bp GATAGTCTGTTGATGCCATTGTCACTGAGCAAGCGTTaGAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTT +
Preference number: 3 (lower is better)
Translates to: DSLLMPLSLSKR*KGSFPSCSGDF
Trigger: AAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCATCAACAGACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CCA 72 bp GCTCCTTTAAATCAACGACACTGTGTGGCCACACAATaGAGGACTCCAGTAATGGAAACTATAGGCCTGAAT +
Preference number: 3 (lower is better)
Translates to: APLNQRHCVATQ*RTPVMETIGLN
Trigger: ATTCAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR-3UTR CAA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTTTGGATACTGTCTTGTaGAGTGATGGTGGCTGTGGT +
Preference number: 3 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSLDTVL*SDGGCG
Trigger: ACCACAGCCACCATCACTCAACAAGACAGTATCCAA...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441123.1
3UTR-3UTR CAA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAAATGTATAAGAAGTaGTGGTGGTTGGTTGGTTGT +
Preference number: 3 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSQMYKK*WWLVGC
Trigger: ACAACCAACCAACCACCACAACTTCTTATACATTTG...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTGGGCGTGCCGTAGGATaGCCCCTCCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: AGGHDGCGPHWTAWRSPGGRAVG*PLPGPA
Trigger: TGCGGGACCTGGGAGGGGCCATCCTACGGCACGCCC...ACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp CTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCTGGCTGGAGAGGGCGGACACGACGGGTaGGGGCCCCACTGGACCGCA +
Preference number: 4 (lower is better)
Translates to: LLLGRFREWRSSSMLAGEGGHDG*GPHWTA
Trigger: TGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCC...CTCTCCAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp AGCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGGAAGTGACGAAGGAGTaGGGCCCCCGGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SRRTRRVRAPLDRMALTREVTKE*GPRTLL
Trigger: GAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACTTC...CCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp AGCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGGGGGGTCATAGGTTGTaGGCTGGCCTCTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SRRTRRVRAPLDRMALTRGGHRL*AGLCLG
Trigger: GCCCAGACAGAGGCCAGCCCACAACCTATGACCCCC...CCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGCT
70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGGGGTGCGGGCCCCACTaGACCGCATGGCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPGCGPH*TAWRSP
Trigger: TGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCC...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CGGGCGTGCCGTAGGATGGCCCCTCCCAGGTCCCGCAGGCGGACAGCTGCTCGGGTCCCCATCGTCTTCTaGCTCCTCCTGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RACRRMAPPRSRRRTAARVPIVF*LLLQGL
Trigger: CAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGAC...CCGAGCAGCTGTCCGCCTGCGGGACCTGGGAGGGGCCATCCTACGGCACGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp AGCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGCCACTCACCCCGCCTTaGGCTTCCTGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SRRTRRVRAPLDRMALTRPLTPP*ASCSSS
Trigger: GGAAGAAGAGCAGGAAGCTCAAGGCGGGGTGAGTGG...CCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp GGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACGGGCGTGCCGTAGGATaGCCCCTCCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: GVGPPDSAQVDHRTVIGHGRAVG*PLPGPA
Trigger: TGCGGGACCTGGGAGGGGCCATCCTACGGCACGCCC...GTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GGCGTAGCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCAGTCTTCCAATTTGGGTaGCTCGGGCAGGTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: GVAGGHDGCGPHWTAWRSVFQFG*LGQVSA
Trigger: GGCACTCACCTGCCCGAGTCACCCAAATTGGAAGAC...TGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGCTACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGCTGTGCCCTGCGGGATaGAGGCAGGGCAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPLCPAG*RQGKRM
Trigger: CATCCGCTTGCCCTGCCTCCATCCCGCAGGGCACAG...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCGTCCCTGGCCTACCATaGGAGGGGGAAGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: EGVGPPDSAQVDHRTVIGVPGLP*EGEAAG
Trigger: GCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGAC...GCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGATGGGAACGCCATTGTaGAGGAGGCCCTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQMGTPL*RRPSRG
Trigger: GCCCCGGGAGGGCCTCCTGCACAATGGCGTTCCCAT...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTCTCTGGCGGACACGACGGGTaGGGGCCCCACTGGACCGCA +
Preference number: 4 (lower is better)
Translates to: SLPHHGPRHSPGPCLGFSGGHDG*GPHWTA
Trigger: TGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCC...AGAGAAGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATGGCGGACACGACGGGTaGGGGCCCCACTGGACCGCA +
Preference number: 4 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHGGHDG*GPHWTA
Trigger: TGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCC...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCAGGGCGTGCCGTAGGATaGCCCCTCCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAAGRAVG*PLPGPA
Trigger: TGCGGGACCTGGGAGGGGCCATCCTACGGCACGCCC...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGTTAGTGGGAGTAGGATaGAGCGGGCCAGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPLVGVG*SGPGSP
Trigger: GGGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAA...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CGGGCGTGCCGTAGGATGGCCCCTCCCAGGTCCCGCAGGCGGACAGCTGCTCGGTATCCACGGCATCTCTaGGATCAGTGTCGGAACCTC +
Preference number: 4 (lower is better)
Translates to: RACRRMAPPRSRRRTAARYPRHL*DQCRNL
Trigger: GAGGTTCCGACACTGATCCCAGAGATGCCGTGGATA...CCGAGCAGCTGTCCGCCTGCGGGACCTGGGAGGGGCCATCCTACGGCACGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGTGGGGAGATTCCCCCTaGGACCCTGGCGTATCCACG +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPWGDSP*DPGVST
Trigger: CGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
3UTR CAA 72 bp GGTGGTGGTGGCTGTGCCAGCTTCTGCCGAAGGGCATaGATCTCCCGGCGTAGCAGGCGGACACGACGGGTG +
Preference number: 4 (lower is better)
Translates to: GGGGCASFCRRA*ISRRSRRTRRV
Trigger: CACCCGTCGTGTCCGCCTGCTACGCCGGGAGATCAATGCCCTTCGGCAGAAGCTGGCACAGCCACCACCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp AGCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGCATCACTGGTCTGTTTaGAGGCGCCACCCTTATTGG +
Preference number: 4 (lower is better)
Translates to: SRRTRRVRAPLDRMALTRHHWSV*RRHPYW
Trigger: CCAATAAGGGTGGCGCCTTCAAACAGACCAGTGATG...CCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGGCCTCTGTCTGGGCCTaGGGAGCCTGGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSASVWA*GAWQRH
Trigger: GTGTCTCTGCCAGGCTCCTCAGGCCCAGACAGAGGC...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGGATAGGAGCCCACCCTaGAGGCTTGGACCACCTCGT +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPDRSPP*RLGPPR
Trigger: ACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATC...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR TCA 90 bp CTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCTGGCTGGAGAGTCTGCCGAAGGGCATTaGTCTCCCGGCGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LLLGRFREWRSSSMLAGESAEGH*SPGVAG
Trigger: GCCTGCTACGCCGGGAGATCAATGCCCTTCGGCAGA...CTCTCCAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGCGGCCCTCGGCATTCTaGCGGGACTTCCGACGAGGC +
Preference number: 4 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRRPSAF*RDFRRG
Trigger: GCCTCGTCGGAAGTCCCGGCAGAATGCCGAGGGCCG...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCCCGATGTTCTCTGCCTaGCGCCGGGCGTGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCPMFSA*RRACRR
Trigger: CCTACGGCACGCCCGGCGGCAGGCAGAGAACATCGG...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTCCAGTTTCTCCAGCTCAGACAAGGAAGGTaGAGGCCCAGTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TGAGPTGPHGAHQVQFLQLRQGR*RPSGLQ
Trigger: CTGGAGCCCACTGGGCCTGCACCTTCCTTGTCTGAG...CTGGAGAAACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGTCTCACTACAGCTCCTaGTCCTTGGCCGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPSHYSS*SLAASG
Trigger: CCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGAGA...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTGTAAGAGGGTATCTGTaGGACAGCAAGCATGGGGAG +
Preference number: 4 (lower is better)
Translates to: AGGHDGCGPHWTAWRSPGVRGYL*DSKHGE
Trigger: CTCCCCATGCTTGCTGTCCCACAGATACCCTCTTAC...ACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAGGGCGTGCCGTAGGATaGCCCCTCCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSGRAVG*PLPGPA
Trigger: TGCGGGACCTGGGAGGGGCCATCCTACGGCACGCCC...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGTCCCACGGCTGCGTTTaGGGGGCGTCAGACCACTGC +
Preference number: 4 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSSHGCV*GASDHC
Trigger: GCAGTGGTCTGACGCCCCCCAAACGCAGCCGTGGGA...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
CDS-3UTR CCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGCACTCGAGACAGGGCTaGCTTCCCACGGCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPHSRQG*LPTAAF
Trigger: AAACGCAGCCGTGGGAAGCCAGCCCTGTCTCGAGTG...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449261.6
ENST00000534400.5
CDS-3UTR CCA 90 bp GGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACTGGGGAGATTCCCCCTaGGACCCTGGCGTATCCACG +
Preference number: 4 (lower is better)
Translates to: GVGPPDSAQVDHRTVIGHWGDSP*DPGVST
Trigger: CGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA...GTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGGGGGGTCATAGGTTGTaGGCTGGCCTCTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQGGHRL*AGLCLG
Trigger: GCCCAGACAGAGGCCAGCCCACAACCTATGACCCCC...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTGGGTGCGGGCCCCACTaGACCGCATGGCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASGCGPH*TAWRSP
Trigger: TGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCC...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp ACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTCCAGTTTCTCCAGGTCCCCATCGTCTTCTaGCTCCTCCTGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TGAGPTGPHGAHQVQFLQVPIVF*LLLQGL
Trigger: CAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGAC...CTGGAGAAACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGACAGCTCCTGCTCCTTaGCCGCTTCCGGGAGTGGCG +
Preference number: 4 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQTAPAP*PLPGVA
Trigger: CGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGT...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCGGGTGGGTGAGCACTTaGGACTGTAGGGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCGWVST*DCRGTG
Trigger: CCCCGTCCCCCTACAGTCTCAAGTGCTCACCCACCC...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGTGACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCGGTCTCCCGGGTGGGTaGGCACTTGAGACTGTAGGG +
Preference number: 4 (lower is better)
Translates to: SDEGVGPPDSAQVDHRTVGLPGG*ALETVG
Trigger: CCCTACAGTCTCAAGTGCTCACCCACCCGGGAGACC...GACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGTCTTGGGCACTCCCTTaGGGGAGCCACTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRSWALP*GSHSPR
Trigger: GCGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGA...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AAGAGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGGTCCCTGGCCTACCATaGGAGGGGGAAGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: KRGPALIQGAHLQSWEVVVPGLP*EGEAAG
Trigger: GCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGAC...CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTGTCCCTGGCCTACCATaGGAGGGGGAAGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCVPGLP*EGEAAG
Trigger: GCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGAC...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGCCTCTGTCTGGGCCTaGGGAGCCTGGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLASVWA*GAWQRH
Trigger: GTGTCTCTGCCAGGCTCCTCAGGCCCAGACAGAGGC...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGCGGCCCTCGGCATTCTaGCGGGACTTCCGACGAGGC +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLRPSAF*RDFRRG
Trigger: GCCTCGTCGGAAGTCCCGGCAGAATGCCGAGGGCCG...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTTTCTGCGAAGATGTGTaGAGGATCCTTCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AGGHDGCGPHWTAWRSPGFCEDV*RILLLQ
Trigger: CTGCAGGAGAAGGATCCTGCACACATCTTCGCAGAA...ACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTCCGATGTTCTCTGCCTaGCGCCGGGCGTGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISPMFSA*RRACRR
Trigger: CCTACGGCACGCCCGGCGGCAGGCAGAGAACATCGG...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCATGGGAACGCCATTGTaGAGGAGGCCCTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PGTLAYPRHLWDQCRNLTMGTPL*RRPSRG
Trigger: GCCCCGGGAGGGCCTCCTGCACAATGGCGTTCCCAT...GGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCATGGGAACGCCATTGTaGAGGAGGCCCTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCMGTPL*RRPSRG
Trigger: GCCCCGGGAGGGCCTCCTGCACAATGGCGTTCCCAT...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGATGGGAACGCCATTGTaGAGGAGGCCCTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRMGTPL*RRPSRG
Trigger: GCCCCGGGAGGGCCTCCTGCACAATGGCGTTCCCAT...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCAATGGGAACGCCATTGTaGAGGAGGCCCTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAAMGTPL*RRPSRG
Trigger: GCCCCGGGAGGGCCTCCTGCACAATGGCGTTCCCAT...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCAGGGGCCCCCGGACTCTaGTCAGGTGGATCATCGCAC +
Preference number: 4 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAAGAPGL*SGGSSH
Trigger: GTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCC...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACGAAGAGGCTTCTCTGTaGCCTGCGGGATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GVGPPDSAQVDHRTVIGHEEASL*PAGWRQ
Trigger: CTGCCTCCATCCCGCAGGGCACAGAGAAGCCTCTTC...GTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCGTCTTCTCCCGCGCCTaGCTCCGTGGCCTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGVFSRA*LRGLRR
Trigger: ACGGCGGAGGCCACGGAGGCAGGCGCGGGAGAAGAC...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357641.10
CDS-3UTR GCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTCTGCTCCAGCACAGCTaGATCCCCCTGGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISLLQHS*IPLGPC
Trigger: GCAGGGCCCCAGGGGGATGCAGCTGTGCTGGAGCAG...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGGGCGCTCTTCCTCGATaGTGGCTGGAGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSGALPR*WLERQE
Trigger: CTCCTGCCTCTCCAGCCAGCATCGAGGAAGAGCGCC...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CCA 90 bp ATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAGGGCGTGCCGTAGGATaGCCCCTCCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: MAISGLQLALRLWCSGGEGRAVG*PLPGPA
Trigger: TGCGGGACCTGGGAGGGGCCATCCTACGGCACGCCC...TTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGAAGTGACGAAGGAGTaGGGCCCCCGGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: AQSLAYHERGKLPAIHLAEVTKE*GPRTLL
Trigger: GAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACTTC...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCGAAGTGACGAAGGAGTaGGGCCCCCGGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: EGVGPPDSAQVDHRTVIGEVTKE*GPRTLL
Trigger: GAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACTTC...GCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGCTGTGCCCTGCGGGATaGAGGCAGGGCAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVLCPAG*RQGKRM
Trigger: CATCCGCTTGCCCTGCCTCCATCCCGCAGGGCACAG...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGTTAGTGGGAGTAGGATaGAGCGGGCCAGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQLVGVG*SGPGSP
Trigger: GGGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAA...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGTGGGGAGATTCCCCCTaGGACCCTGGCGTATCCACG +
Preference number: 4 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSWGDSP*DPGVST
Trigger: CGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CTCTGTCCCCATCGTCTTCTGGCTCCTCCTGCAAGGCCTGCTCCAGCACAGCTGGGCCGCTTCCGGGAGTaGCGCTCTTCCTCGATGCTG +
Preference number: 4 (lower is better)
Translates to: LCPHRLLAPPARPAPAQLGRFRE*RSSSML
Trigger: CAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCC...CAGCTGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGACAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
3UTR CAA 72 bp ACCTCTCCCCTTCGCTCTCACTACAGCTCCTGCTCCTaGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGC +
Preference number: 4 (lower is better)
Translates to: TSPLRSHYSSCS*AASGSGALPRC
Trigger: GCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGAGAGCGAAGGGGAGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAGGGTGGGTGAGCACTTaGGACTGTAGGGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSGWVST*DCRGTG
Trigger: CCCCGTCCCCCTACAGTCTCAAGTGCTCACCCACCC...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGGGTCTCCCGGGTGGGTaGGCACTTGAGACTGTAGGG +
Preference number: 4 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRGLPGG*ALETVG
Trigger: CCCTACAGTCTCAAGTGCTCACCCACCCGGGAGACC...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTTCTTGGGCACTCCCTTaGGGGAGCCACTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISSWALP*GSHSPR
Trigger: GCGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGA...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAACAGGTAGCTGGAAGTaGCGAAGGAGTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAETGSWK*RRSGAP
Trigger: GGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGT...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCACAGGTAGCTGGAAGTaGCGAAGGAGTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PGTLAYPRHLWDQCRNLTTGSWK*RRSGAP
Trigger: GGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGT...GGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGTCCCTGGCCTACCATaGGAGGGGGAAGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGVPGLP*EGEAAG
Trigger: GCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGAC...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGAGGGCCTCTGTCTGGGCCTaGGGAGCCTGGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: VSTAKGKVCGWEVVSWGRASVWA*GAWQRH
Trigger: GTGTCTCTGCCAGGCTCCTCAGGCCCAGACAGAGGC...CCTCCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATAGAGGGGACCCGCCTTaGTCCAGGGGGCACACTTGC +
Preference number: 4 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHRGDPP*SRGHTC
Trigger: GCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCT...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGAGAGGGGACCCGCCTTaGTCCAGGGGGCACACTTGC +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLRGDPP*SRGHTC
Trigger: GCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCT...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATATGGCACCTGGGAACTaGGGGGACAGGCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHMAPGN*GDRPQP
Trigger: CGGCTGAGGCCTGTCCCCTCAGTTCCCAGGTGCCAT...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357641.10
CDS-3UTR GCA 90 bp GTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGCGGCCCTCGGCATTCTaGCGGGACTTCCGACGAGGC +
Preference number: 4 (lower is better)
Translates to: VVSTAKGKVCGWEVVSWGRPSAF*RDFRRG
Trigger: GCCTCGTCGGAAGTCCCGGCAGAATGCCGAGGGCCG...CCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGCGGCCCTCGGCATTCTaGCGGGACTTCCGACGAGGC +
Preference number: 4 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWRPSAF*RDFRRG
Trigger: GCCTCGTCGGAAGTCCCGGCAGAATGCCGAGGGCCG...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTCCAGTTTCTCCAGACTGTTGGGCCCCACTaGTGCGACTCTCCAAGTATG +
Preference number: 4 (lower is better)
Translates to: TGAGPTGPHGAHQVQFLQTVGPH*CDSPSM
Trigger: CATACTTGGAGAGTCGCAGCAGTGGGGCCCAACAGT...CTGGAGAAACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGGGGTGTGTCTTGGCCTaGTTCCTCTGGCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPGCVLA*FLWLLL
Trigger: AAGAAGGAGCCAGAGGAAGCAGGCCAAGACACACCC...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGGCAGGATCCTTCTCCTaGAGCAGGTCCAGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPAGSFS*SRSSVV
Trigger: GACAACACTGGACCTGCTGCAGGAGAAGGATCCTGC...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGCCGATGTTCTCTGCCTaGCGCCGGGCGTGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWPMFSA*RRACRR
Trigger: CCTACGGCACGCCCGGCGGCAGGCAGAGAACATCGG...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTCCAGTTTCTCCAGTCCCTTGGAAGCCACTaGCAGGTGCGCTTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TGAGPTGPHGAHQVQFLQSLGSH*QVRLLS
Trigger: TGACAACAAGCGCACCTGGCAGTGGCTTCCAAGGGA...CTGGAGAAACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532330.5
CDS-3UTR GCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTGGGGCCCCCGGACTCTaGTCAGGTGGATCATCGCAC +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASGAPGL*SGGSSH
Trigger: GTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCC...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp TTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGGGGCCCCCGGACTCTaGTCAGGTGGATCATCGCAC +
Preference number: 4 (lower is better)
Translates to: LGRFPLGPWRIHGISGISGAPGL*SGGSSH
Trigger: GTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCC...ACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGAAGAGGCTTCTCTGTaGCCTGCGGGATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQEEASL*PAGWRQ
Trigger: CTGCCTCCATCCCGCAGGGCACAGAGAAGCCTCTTC...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCGAAGAGGCTTCTCTGTaGCCTGCGGGATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: EGVGPPDSAQVDHRTVIGEEASL*PAGWRQ
Trigger: CTGCCTCCATCCCGCAGGGCACAGAGAAGCCTCTTC...GCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCTGGTGGTGGTGGCTGTaGCAGCTTCTGCCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCWWWWL*QLLPKG
Trigger: GCCCTTCGGCAGAAGCTGGCACAGCCACCACCACCA...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACACTGCTCCAGCACAGCTaGATCCCCCTGGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTLLQHS*IPLGPC
Trigger: GCAGGGCCCCAGGGGGATGCAGCTGTGCTGGAGCAG...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR GCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCAGAGGCAGGAGAGCCTaGCACACCATGGTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCRGRRA*HTMVLA
Trigger: GGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCT...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGGCGCTCTTCCTCGATaGTGGCTGGAGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAEGALPR*WLERQE
Trigger: CTCCTGCCTCTCCAGCCAGCATCGAGGAAGAGCGCC...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCAGTGGCCGCACCTGGTaGCGAGTGGGCCTCACAGTA +
Preference number: 4 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLSGRTW*RVGLTV
Trigger: TACTGTGAGGCCCACTCGCCACCAGGTGCGGCCACT...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAGTGGCCGCACCTGGTaGCGAGTGGGCCTCACAGTA +
Preference number: 4 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRSGRTW*RVGLTV
Trigger: TACTGTGAGGCCCACTCGCCACCAGGTGCGGCCACT...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGCAGGACTTTGTCCCTTaGAAGCCACTGCCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQQDFVP*KPLPGA
Trigger: CGCACCTGGCAGTGGCTTCCAAGGGACAAAGTCCTG...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACTGTGCCCTGCGGGATaGAGGCAGGGCAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: DSPWDPGVSTASLGSVSELCPAG*RQGKRM
Trigger: CATCCGCTTGCCCTGCCTCCATCCCGCAGGGCACAG...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGTGCCGGCCATACATCTaGCAGGGGCAGAAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQCRPYI*QGQKRL
Trigger: AAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCA...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTCCAGTTTCTCCACTGAGGGACCTTGGGTaGGAGTTTTTGGCACACAGC +
Preference number: 4 (lower is better)
Translates to: DGCGPHWTAWRSPGPVSPLRDLG*EFLAHS
Trigger: GCTGTGTGCCAAAAACTCCCACCCAAGGTCCCTCAG...TGGAGAAACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp GACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTCCAGTTTCTCCATCCCCTGAGGGACCTTaGGTGGGAGTTTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: DGCGPHWTAWRSPGPVSPSPEGP*VGVFGT
Trigger: TGTGCCAAAAACTCCCACCCAAGGTCCCTCAGGGGA...TGGAGAAACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAATGGGGAGATTCCCCCTaGGACCCTGGCGTATCCACG +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAEWGDSP*DPGVST
Trigger: CGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCTGGCTGGAGAGCTTCAGCTGCACCTCTaGGGACAAATGGGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: LLLGRFREWRSSSMLAGELQLHL*GQMGPV
Trigger: AACCGGGCCCATTTGTCCCCAGAGGTGCAGCTGAAG...CTCTCCAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGGGGTGCGGGCCCCACTaGACCGCATGGCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWGCGPH*TAWRSP
Trigger: TGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCC...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR CCA 90 bp CCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCTGGCTGTGGTGGTGGTaGCTGTGCCAGCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: PGTLAYPRHLWDQCRNLTWLWWW*LCQLLP
Trigger: CGGCAGAAGCTGGCACAGCCACCACCACCACAGCCA...GGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp AGTGACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCGTCCCCATCGTCTTCTaGCTCCTCCTGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SDEGVGPPDSAQVDHRTVVPIVF*LLLQGL
Trigger: CAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGAC...GACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTGGCCGCTTCCGGGAGTaGCGCTCTTCCTCGATGCTG +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASGRFRE*RSSSML
Trigger: CAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCC...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTGGCCGCTTCCGGGAGTaGCGCTCTTCCTCGATGCTG +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCGRFRE*RSSSML
Trigger: CAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCC...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTCCTGCTCCTTaGCCGCTTCCGGGAGTGGCG +
Preference number: 4 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSTAPAP*PLPGVA
Trigger: CGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGT...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR TCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTGGTCTCCCGGGTGGGTaGGCACTTGAGACTGTAGGG +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCGLPGG*ALETVG
Trigger: CCCTACAGTCTCAAGTGCTCACCCACCCGGGAGACC...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATACCACTCACCCCGCCTTaGGCTTCCTGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVIPLTPP*ASCSSS
Trigger: GGAAGAAGAGCAGGAAGCTCAAGGCGGGGTGAGTGG...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAACCACTCACCCCGCCTTaGGCTTCCTGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAEPLTPP*ASCSSS
Trigger: GGAAGAAGAGCAGGAAGCTCAAGGCGGGGTGAGTGG...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGTCTTGGGCACTCCCTTaGGGGAGCCACTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWSWALP*GSHSPR
Trigger: GCGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGA...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCTCTTGGGCACTCCCTTaGGGGAGCCACTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGSWALP*GSHSPR
Trigger: GCGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGA...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATAGTCTTCCAATTTGGGTaGCTCGGGCAGGTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: GEKAQSLAYHERGKLPAIVFQFG*LGQVSA
Trigger: GGCACTCACCTGCCCGAGTCACCCAAATTGGAAGAC...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CCCTTCGCTCTCACTACAGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCATAGGCCACCTGCACTaGCTTGCGGATGCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PFALTTAPAPWPLPGVALIGHLH*LADAGL
Trigger: AAGACCAGCATCCGCAAGTCAGTGCAGGTGGCCTAT...GAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGAGAGCGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCCTCTGTCTGGGCCTaGGGAGCCTGGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWASVWA*GAWQRH
Trigger: GTGTCTCTGCCAGGCTCCTCAGGCCCAGACAGAGGC...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTGAGGGCAGACCCAGCTaGCGAGCACAGCTCCACACA +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCEGRPS*RAQLHT
Trigger: TGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTC...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACACAGAGTCCACAGCTaGCCAACTACCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GEKAQSLAYHERGKLPAIHRVHS*PTTWGE
Trigger: CTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTG...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp TTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTTCTGCCGAAGGGCATTaGTCTCCCGGCGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LGRFPLGPWRIHGISGISSAEGH*SPGVAG
Trigger: GCCTGCTACGCCGGGAGATCAATGCCCTTCGGCAGA...ACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTTCTGCCGAAGGGCATTaGTCTCCCGGCGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASSAEGH*SPGVAG
Trigger: GCCTGCTACGCCGGGAGATCAATGCCCTTCGGCAGA...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGGTGCTTCTGGCTGGATaGCTGAGTCCACCATACGGA +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQVLLAG*LSPPYG
Trigger: TCCGTATGGTGGACTCAGGCATCCAGCCAGAAGCAC...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGGCGTTTCTTTGGGACTaGAGATGGGAGTGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQAFLWD*RWECKR
Trigger: GCGCTTGCACTCCCATCTGCAGTCCCAAAGAAACGC...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCGGGGCCCCCGGACTCTaGTCAGGTGGATCATCGCAC +
Preference number: 4 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGGAPGL*SGGSSH
Trigger: GTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCC...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTTGGTGGCAGGCGCCATaGCATCCAGGTGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASWWQAP*HPGGGE
Trigger: CTCTCCACCACCTGGATGGCATGGCGCCTGCCACCA...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATATGGCAATCAGCGGCCTaGAACTGGCCCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: GEKAQSLAYHERGKLPAIWQSAA*NWPCDF
Trigger: AAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCA...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGTGGCAATCAGCGGCCTaGAACTGGCCCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQWQSAA*NWPCDF
Trigger: AAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCA...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGTCTTCTGGCTCCTCCTaGAAGGCCTGCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSSSGSS*KACSST
Trigger: TGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGA...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR GCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAACTCAGACAAGGAAGGTaGAGGCCCAGTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAELRQGR*RPSGLQ
Trigger: CTGGAGCCCACTGGGCCTGCACCTTCCTTGTCTGAG...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCTCTCACTACAGCTCCTaGTCCTTGGCCGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: PGTLAYPRHLWDQCRNLTSHYSS*SLAASG
Trigger: CCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGAGA...GGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAACTTCCTCATGGCACCTaGGAACTGAGGGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAELPHGT*ELRGQA
Trigger: GGCCTGTCCCCTCAGTTCCCAGGTGCCATGAGGAAG...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTACCTCGACAATCCGCTaGGCCTGGGCATATGTCAGG +
Preference number: 4 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGTSTIR*AWAYVR
Trigger: CCTGACATATGCCCAGGCCCAGCGGATTGTCGAGGT...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATAGGGGGTGCTTCTGGCTaGATGCCTGAGTCCACCATA +
Preference number: 4 (lower is better)
Translates to: GEKAQSLAYHERGKLPAIGGASG*MPESTI
Trigger: TATGGTGGACTCAGGCATCCAGCCAGAAGCACCCCC...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AGTGACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCTCGATGAGTGACTGTTaGGCCCCACTGCTGCGACTC +
Preference number: 4 (lower is better)
Translates to: SDEGVGPPDSAQVDHRTVSMSDC*APLLRL
Trigger: GAGTCGCAGCAGTGGGGCCCAACAGTCACTCATCGA...GACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGAGGCGCCACCCTTATTaGGGCAAAGGATGCAATCCA +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPRRHPY*GKGCNP
Trigger: TGGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCT...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGGTAAGAGGGTATCTGTaGGACAGCAAGCATGGGGAG +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPVRGYL*DSKHGE
Trigger: CTCCCCATGCTTGCTGTCCCACAGATACCCTCTTAC...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCTCCCACGGCTGCGTTTaGGGGGCGTCAGACCACTGC +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLASHGCV*GASDHC
Trigger: GCAGTGGTCTGACGCCCCCCAAACGCAGCCGTGGGA...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
CDS-3UTR CCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGCACTCGAGACAGGGCTaGCTTCCCACGGCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRHSRQG*LPTAAF
Trigger: AAACGCAGCCGTGGGAAGCCAGCCCTGTCTCGAGTG...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
CDS-3UTR CCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATGAAGTGACGAAGGAGTaGGGCCCCCGGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHEVTKE*GPRTLL
Trigger: GAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACTTC...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCCTGTGCCCTGCGGGATaGAGGCAGGGCAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGLCPAG*RQGKRM
Trigger: CATCCGCTTGCCCTGCCTCCATCCCGCAGGGCACAG...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACACTGTGCCCTGCGGGATaGAGGCAGGGCAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTLCPAG*RQGKRM
Trigger: CATCCGCTTGCCCTGCCTCCATCCCGCAGGGCACAG...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: PWDPGVSTASLGSVSEPHGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...GTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTTTAGTGGGAGTAGGATaGAGCGGGCCAGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LGRFPLGPWRIHGISGISLVGVG*SGPGSP
Trigger: GGGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAA...ACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGTTCCCCCTGGGACCCTaGCGTATCCACGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRFPLGP*RIHGIS
Trigger: AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAA...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTGGGGGTCATAGGTTGTaGGCTGGCCTCTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCGGHRL*AGLCLG
Trigger: GCCCAGACAGAGGCCAGCCCACAACCTATGACCCCC...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGGGGGTCATAGGTTGTaGGCTGGCCTCTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGRFPLGPWRIHGISGISGGHRL*AGLCLG
Trigger: GCCCAGACAGAGGCCAGCCCACAACCTATGACCCCC...ACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGCTGGCCCTGCGACTTTaGTGCTCAGGAGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQLALRL*CSGGEK
Trigger: CTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAG...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCATCAGCGGCCTGCAACTaGCCCTGCGACTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAASAACN*PCDFGA
Trigger: AGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGA...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGTCAGCGGCCTGCAACTaGCCCTGCGACTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRSAACN*PCDFGA
Trigger: AGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGA...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCTCAGCGGCCTGCAACTaGCCCTGCGACTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLSAACN*PCDFGA
Trigger: AGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGA...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGATGGGCCCGGTTCTCTaGGATGAGGATGTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQMGPVL*DEDVVH
Trigger: GTGGACAACATCCTCATCCCAGAGAACCGGGCCCAT...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCTGGCTGGAGAGATGGGCCCGGTTCTCTaGGATGAGGATGTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LLLGRFREWRSSSMLAGEMGPVL*DEDVVH
Trigger: GTGGACAACATCCTCATCCCAGAGAACCGGGCCCAT...CTCTCCAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACTTCAGCTGCACCTCTaGGGACAAATGGGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: GEKAQSLAYHERGKLPAILQLHL*GQMGPV
Trigger: AACCGGGCCCATTTGTCCCCAGAGGTGCAGCTGAAG...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGCCCCACTGGACCGCATaGCGCTCACCAGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLPHWTA*RSPGPV
Trigger: AACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGG...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGGAGCCTGCCACACCATaGTCCTCGCCATTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVEPATP*SSPFSR
Trigger: CCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTC...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGAGCCTGCCACACCATaGTCCTCGCCATTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVIEPATP*SSPFSR
Trigger: CCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTC...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCACAGCTCCTGCTCCTTaGCCGCTTCCGGGAGTGGCG +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLATAPAP*PLPGVA
Trigger: CGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGT...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGACAGCTCCTGCTCCTTaGCCGCTTCCGGGAGTGGCG +
Preference number: 4 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWTAPAP*PLPGVA
Trigger: CGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGT...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGCTTTTTGCCCTTGGATaGGGGTTTCTTGGACTTGCC +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPLFALG*GFLGLA
Trigger: GGCAAGTCCAAGAAACCCTCATCCAAGGGCAAAAAG...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCTCTTGGGCACTCCCTTaGGGGAGCCACTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPSWALP*GSHSPR
Trigger: GCGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGA...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCAGTCTTCCAATTTGGGTaGCTCGGGCAGGTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAAVFQFG*LGQVSA
Trigger: GGCACTCACCTGCCCGAGTCACCCAAATTGGAAGAC...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCGTCTTCCAATTTGGGTaGCTCGGGCAGGTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: PGTLAYPRHLWDQCRNLTVFQFG*LGQVSA
Trigger: GGCACTCACCTGCCCGAGTCACCCAAATTGGAAGAC...GGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGATAGGAGCCCACCCTaGAGGCTTGGACCACCTCGT +
Preference number: 4 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISDRSPP*RLGPPR
Trigger: ACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATC...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGATAGGAGCCCACCCTaGAGGCTTGGACCACCTCGT +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLDRSPP*RLGPPR
Trigger: ACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATC...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGAGGGCAGACCCAGCTaGCGAGCACAGCTCCACACA +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGEGRPS*RAQLHT
Trigger: TGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTC...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATACACAGAGTCCACAGCTaGCCAACTACCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVIHRVHS*PTTWGE
Trigger: CTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTG...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR TCA 90 bp GGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACTACTGTCTTGTTGAGTaGTGGTGGCTGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GVGPPDSAQVDHRTVIGHYCLVE*WWLWWW
Trigger: CCACCACCACAGCCACCATCACTCAACAAGACAGTA...GTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp CTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGCTGGCTGGAGAGCATTCTTGGCCTTCTTaGAGAGGACTGATGTGCGGC +
Preference number: 4 (lower is better)
Translates to: LLLGRFREWRSSSMLAGEHSWPS*RGLMCG
Trigger: GCCGCACATCAGTCCTCTTCAAGAAGGCCAAGAATG...CTCTCCAGCCAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATAGTGCTTCTGGCTGGATaGCTGAGTCCACCATACGGA +
Preference number: 4 (lower is better)
Translates to: GEKAQSLAYHERGKLPAIVLLAG*LSPPYG
Trigger: TCCGTATGGTGGACTCAGGCATCCAGCCAGAAGCAC...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATAGTTGGGCCCCACTGCTaGGACTCTCCAAGTATGACT +
Preference number: 4 (lower is better)
Translates to: GEKAQSLAYHERGKLPAIVGPHC*DSPSMT
Trigger: AGTCATACTTGGAGAGTCGCAGCAGTGGGGCCCAAC...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTTATTGGGGCAAAGGATaGAATCCACAGGCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGYWGKG*NPQAGR
Trigger: CCTCCCGGCCTGTGGATTGCATCCTTTGCCCCAATA...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTACCACATGGGCCCAGTaGCCATCACTGGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGTTWAQ*PSLVCL
Trigger: CAAACAGACCAGTGATGGGCACTGGGCCCATGTGGT...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGGGGTGTGTCTTGGCCTaGTTCCTCTGGCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSGCVLA*FLWLLL
Trigger: AAGAAGGAGCCAGAGGAAGCAGGCCAAGACACACCC...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGACTGCAGATGGGAGTaGAAGCGCCGGATAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAEDCRWE*KRRIRG
Trigger: CCCTCTTATCCGGCGCTTGCACTCCCATCTGCAGTC...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGGCGTTTCTTTGGGACTaGAGATGGGAGTGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSAFLWD*RWECKR
Trigger: GCGCTTGCACTCCCATCTGCAGTCCCAAAGAAACGC...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCCCGCAGGCGGACAGCTaGTCGGTGGAAAATTGTGTC +
Preference number: 4 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLPQADS*SVENCV
Trigger: GACACAATTTTCCACCGAGCAGCTGTCCGCCTGCGG...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAACCGCAGGCGGACAGCTaGTCGGTGGAAAATTGTGTC +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAEPQADS*SVENCV
Trigger: GACACAATTTTCCACCGAGCAGCTGTCCGCCTGCGG...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGCCGATGTTCTCTGCCTaGCGCCGGGCGTGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: ACNWPCDFGAQEVKRNVQPMFSA*RRACRR
Trigger: CCTACGGCACGCCCGGCGGCAGGCAGAGAACATCGG...CTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCGCCTCTGCCTGTTTCTaGTCTCCCAGCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCASACF*SPSFST
Trigger: CGTGCTGAAGCTGGGAGAGCAGAAACAGGCAGAGGC...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGGGGCCCCCGGACTCTaGTCAGGTGGATCATCGCAC +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLGAPGL*SGGSSH
Trigger: GTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCC...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTGGGGCCCCCGGACTCTaGTCAGGTGGATCATCGCAC +
Preference number: 4 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTGAPGL*SGGSSH
Trigger: GTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCC...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTGAAGAGGCTTCTCTGTaGCCTGCGGGATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASEEASL*PAGWRQ
Trigger: CTGCCTCCATCCCGCAGGGCACAGAGAAGCCTCTTC...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GCTGGCTGGAGAGGCAGGAGAGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGAGCCCAGGACCTCTTaGCATCTGGGCAATCTCCTA +
Preference number: 4 (lower is better)
Translates to: AGWRGRRACHTMVLAILQEPRTS*HLGNLL
Trigger: TAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTC...CTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCTCCAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGTCCAGGGGGCACACTTaGAGAGCTGGGAAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQSRGHT*RAGKLC
Trigger: ACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGA...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACCTGCACTGACTTGCGGATGGTGGCAGGCGCCATaGCATCCAGGTGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LCSGGSSHGHRPPALTCGWWQAP*HPGGGE
Trigger: CTCTCCACCACCTGGATGGCATGGCGCCTGCCACCA...TCCGCAAGTCAGTGCAGGTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR GCA 90 bp AGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTCTCTGCCTGCAACTGGCCCTaGGACTTTGGTGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLPHHGPRHSPGPCLGFSACNWP*DFGAQE
Trigger: CTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC...AGAGAAGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441123.1
CDS-3UTR GCA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAGCCTGCAACTGGCCCTaGGACTTTGGTGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSACNWP*DFGAQE
Trigger: CTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AAGAGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGGCCTGCAACTGGCCCTaGGACTTTGGTGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: KRGPALIQGAHLQSWEVVACNWP*DFGAQE
Trigger: CTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC...CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCAGGCTGTGCCAGCTTCTaGCGAAGGGCATTGATCTCC +
Preference number: 4 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAAGCASF*RRALIS
Trigger: GGAGATCAATGCCCTTCGGCAGAAGCTGGCACAGCC...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR GCA 90 bp CATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCCCTCTGCTCCAGCACAGCTaGATCCCCCTGGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: HLELVHGVFHTQGQDFVPLLQHS*IPLGPC
Trigger: GCAGGGCCCCAGGGGGATGCAGCTGTGCTGGAGCAG...AGGGACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp GTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGAGAGGCAGGAGAGCCTaGCACACCATGGTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: VVSTAKGKVCGWEVVSWGRGRRA*HTMVLA
Trigger: GGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCT...CCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR GCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGAGAGGCAGGAGAGCCTaGCACACCATGGTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGRGRRA*HTMVLA
Trigger: GGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCT...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTTCTCACTACAGCTCCTaGTCCTTGGCCGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASSHYSS*SLAASG
Trigger: CCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGAGA...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTGCAGCAGGAGGCTTCTaGCTGCAAGCTTCAAATGCC +
Preference number: 4 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGAAGGF*LQASNA
Trigger: GGCATTTGAAGCTTGCAGGCAGAAGCCTCCTGCTGC...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441730.2
CDS-3UTR GCA 90 bp GACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTCCAGTTTCTCCATTGGAAGCCACTGCCTaGAAGCTTCAAATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: DGCGPHWTAWRSPGPVSPLEATA*KLQMPV
Trigger: GACTGGCATTTGAAGCTTGCAGGCAGTGGCTTCCAA...TGGAGAAACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441123.1
CDS-3UTR CCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTCTTCCTCATGGCACCTaGGAACTGAGGGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCLPHGT*ELRGQA
Trigger: GGCCTGTCCCCTCAGTTCCCAGGTGCCATGAGGAAG...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTTCCTCATGGCACCTaGGAACTGAGGGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHLPHGT*ELRGQA
Trigger: GGCCTGTCCCCTCAGTTCCCAGGTGCCATGAGGAAG...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAACCTCGACAATCCGCTaGGCCTGGGCATATGTCAGG +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAETSTIR*AWAYVR
Trigger: CCTGACATATGCCCAGGCCCAGCGGATTGTCGAGGT...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCACCTCGACAATCCGCTaGGCCTGGGCATATGTCAGG +
Preference number: 4 (lower is better)
Translates to: PGTLAYPRHLWDQCRNLTTSTIR*AWAYVR
Trigger: CCTGACATATGCCCAGGCCCAGCGGATTGTCGAGGT...GGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TCACTACAGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGGGGGGTGCTTCTGGCTaGATGCCTGAGTCCACCATA +
Preference number: 4 (lower is better)
Translates to: SLQLLLLGRFREWRSSSMGGASG*MPESTI
Trigger: TATGGTGGACTCAGGCATCCAGCCAGAAGCACCCCC...CATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGGGGGGTGCTTCTGGCTaGATGCCTGAGTCCACCATA +
Preference number: 4 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVGGASG*MPESTI
Trigger: TATGGTGGACTCAGGCATCCAGCCAGAAGCACCCCC...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCTCGATGAGTGACTGTTaGGCCCCACTGCTGCGACTC +
Preference number: 4 (lower is better)
Translates to: PGTLAYPRHLWDQCRNLTSMSDC*APLLRL
Trigger: GAGTCGCAGCAGTGGGGCCCAACAGTCACTCATCGA...GGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGCCTTATGGCACTGGATaGCTGCACCTAGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQPYGTG*LHLALS
Trigger: AGAAAGGGCTAGGTGCAGCCATCCAGTGCCATAAGG...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCTTCGCTCTCACTACAGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCCCTTATGGCACTGGATaGCTGCACCTAGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PFALTTAPAPWPLPGVALPYGTG*LHLALS
Trigger: AGAAAGGGCTAGGTGCAGCCATCCAGTGCCATAAGG...GAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGAGAGCGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp TTCACAGCAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGAGTGGCCGCACCTGGTaGCGAGTGGGCCTCACAGTA +
Preference number: 4 (lower is better)
Translates to: FTADATETHRPRATAGSESGRTW*RVGLTV
Trigger: TACTGTGAGGCCCACTCGCCACCAGGTGCGGCCACT...CTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTGCTGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR CCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGTTGGCCTGCTTCCTCTaGCTCCTTCTTGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPLACFL*LLLDLL
Trigger: CAGAAGATCAAGAAGGAGCCAGAGGAAGCAGGCCAA...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGCAAGCATGGGGAGAGTaGAGGGTGTGTCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVQAWGE*RVCLGL
Trigger: CAGGCCAAGACACACCCTCCACTCTCCCCATGCTTG...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGCTTTGGGACTGCAGATaGGAGTGCAAGCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQLWDCR*ECKRRI
Trigger: TATCCGGCGCTTGCACTCCCATCTGCAGTCCCAAAG...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCTTTGGGACTGCAGATaGGAGTGCAAGCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: EGVGPPDSAQVDHRTVIGLWDCR*ECKRRI
Trigger: TATCCGGCGCTTGCACTCCCATCTGCAGTCCCAAAG...GCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GCTGGCTGGAGAGGCAGGAGAGCCTGCCACACCATGGTCCTCGCCATTCTCCAGTCCATGGCAGCCTGCTaGACTTTGACCTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: AGWRGRRACHTMVLAILQSMAAC*TLTCSR
Trigger: ACGAGAGCAGGTCAAAGTCCAGCAGGCTGCCATGGA...CTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCTCCAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp AAAGGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCAAGGTGCGGTACAGGTaGGACTCCAGCTTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: KGGRGQTQLTSTAPHKPPKVRYR*DSSFRL
Trigger: GAGGCGGAAGCTGGAGTCCCACCTGTACCGCACCTT...GGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGGGCGTGCCGTAGGATaGCCCCTCCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: FQHLELVHGVFHTQGQDFGRAVG*PLPGPA
Trigger: TGCGGGACCTGGGAGGGGCCATCCTACGGCACGCCC...AAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCGAAGTGACGAAGGAGTaGGGCCCCCGGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGEVTKE*GPRTLL
Trigger: GAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACTTC...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTGCCGGCCATACATCTaGCAGGGGCAGAAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVCRPYI*QGQKRL
Trigger: AAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCA...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVRKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCRKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 4 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AGTGACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 4 (lower is better)
Translates to: SDEGVGPPDSAQVDHRTVAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...GACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCTTGGGTGGGAGTTTTTaGCACACAGCAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: EGVGPPDSAQVDHRTVIGLGGSF*HTAGLP
Trigger: TGGCAGGCCTGCTGTGTGCCAAAAACTCCCACCCAA...GCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAAGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: DSPWDPGVSTASLGSVSEGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TTCTTGAAGAGGACTGATGTGCGGCGACCCACACCACTAAGTGGGGTACCGGCCTTAGTGGGAGTAGGATaGAGCGGGCCAGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: FLKRTDVRRPTPLSGVPALVGVG*SGPGSP
Trigger: GGGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAA...GGCCGGTACCCCACTTAGTGGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTTTAGTGGGAGTAGGATaGAGCGGGCCAGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: IHGISGISVGTSPALRCSLVGVG*SGPGSP
Trigger: GGGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAA...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGCCGTTTCTTCCCCCTGGGACCCTaGCGTATCCACGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: QTRQRHIGPVPQQDLSRFFPLGP*RIHGIS
Trigger: AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAA...GAAACGGCTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAAGCAAGACTGGGCAATaGGTGCAGAAGATGGGACCG +
Preference number: 4 (lower is better)
Translates to: AQSLAYHERGKLPAIHLASKTGQ*VQKMGP
Trigger: CGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCT...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TTCTTGAAGAGGACTGATGTGCGGCGACCCACACCACTAAGTGGGGTACCGGCCGGGGGTCATAGGTTGTaGGCTGGCCTCTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FLKRTDVRRPTPLSGVPAGGHRL*AGLCLG
Trigger: GCCCAGACAGAGGCCAGCCCACAACCTATGACCCCC...GGCCGGTACCCCACTTAGTGGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTCCCACCCTGAAGGCTTaGACCACCTCGTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCPTLKA*TTSWQQ
Trigger: TTGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGG...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGCAGGAAGATGTTTGGTaGCAGGCGCCATGCCATCCA +
Preference number: 4 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSQEDVW*QAPCHP
Trigger: TGGATGGCATGGCGCCTGCCACCAAACATCTTCCTG...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCGGCCAGGAAGATGTTTaGTGGCAGGCGCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCGQEDV*WQAPCH
Trigger: ATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCC...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGGGCCAGGAAGATGTTTaGTGGCAGGCGCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVGQEDV*WQAPCH
Trigger: ATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCC...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTCTGGCCCTGCGACTTTaGTGCTCAGGAGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGLALRL*CSGGEK
Trigger: CTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAG...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGTGACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATGGGCCCGGTTCTCTaGGATGAGGATGTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SDEGVGPPDSAQVDHRTVMGPVL*DEDVVH
Trigger: GTGGACAACATCCTCATCCCAGAGAACCGGGCCCAT...GACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCACCTCTGGGGACAAATaGGCCCGGTTCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCTSGDK*ARFSGM
Trigger: CATCCCAGAGAACCGGGCCCATTTGTCCCCAGAGGT...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGTCCCCATCGTCTTCTaGCTCCTCCTGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLVPIVF*LLLQGL
Trigger: CAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGAC...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGACCCACACCACTAAGTaGGGTACCGGCCGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGTHTTK*GTGRGV
Trigger: GACACCCCGGCCGGTACCCCACTTAGTGGTGTGGGT...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACAGCTCCTGCTCCTTaGCCGCTTCCGGGAGTGGCG +
Preference number: 4 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWTAPAP*PLPGVA
Trigger: CGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGT...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR TCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGGGTGGGTGAGCACTTaGGACTGTAGGGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLGWVST*DCRGTG
Trigger: CCCCGTCCCCCTACAGTCTCAAGTGCTCACCCACCC...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTGGTCTCCCGGGTGGGTaGGCACTTGAGACTGTAGGG +
Preference number: 4 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTGLPGG*ALETVG
Trigger: CCCTACAGTCTCAAGTGCTCACCCACCCGGGAGACC...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GCTGGCTGGAGAGGCAGGAGAGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGCGACTCTCCAAGTATaGCTCTTTCTCAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: AGWRGRRACHTMVLAILQATLQV*LFLKPV
Trigger: GACCGGCTTGAGAAAGAGTCATACTTGGAGAGTCGC...CTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCTCCAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp CCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCGTCTTCATCGATGAGTaGCTGTTGGGCCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: PGTLAYPRHLWDQCRNLTVFIDE*LLGPTA
Trigger: AGCAGTGGGGCCCAACAGTCACTCATCGATGAAGAC...GGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGAGGTGGGCTCAATCTTCATaGAGAGCCCAGCCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: VSTAKGKVCGWEVVSWGRWAQSS*RAQPAV
Trigger: CACAGCGGGCTGGGCTCTTCATGAAGATTGAGCCCA...CCTCCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGGAACCTCACTCAAGTTaGCTGGTTCTGCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPEPHSS*LVLRRC
Trigger: ACATCTTCGCAGAACCAGTCAACTTGAGTGAGGTTC...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449261.6
ENST00000534400.5
CDS-3UTR TCA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGATAGGCCACCTGCACTaGCTTGCGGATGCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVIGHLH*LADAGL
Trigger: AAGACCAGCATCCGCAAGTCAGTGCAGGTGGCCTAT...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAACAGGTAGCTGGAAGTaGCGAAGGAGTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLTGSWK*RRSGAP
Trigger: GGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGT...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp ACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTCCAGTTTCTCCAGAAAAGACCAGTGTGGTaGCGGTTTCTGTCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: TGAGPTGPHGAHQVQFLQKRPVW*RFLSVW
Trigger: CCAAACTGACAGAAACCGTCACCACACTGGTCTTTT...CTGGAGAAACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp AGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGAGAGGGGACCCGCCTTaGTCCAGGGGGCACACTTGC +
Preference number: 4 (lower is better)
Translates to: STAPHKPPSTSMWTDGHSRGDPP*SRGHTC
Trigger: GCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCT...CGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTGATAGGAGCCCACCCTaGAGGCTTGGACCACCTCGT +
Preference number: 4 (lower is better)
Translates to: IHGISGISVGTSPALRCSDRSPP*RLGPPR
Trigger: ACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATC...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGAGGGCAGACCCAGCTaGCGAGCACAGCTCCACACA +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLEGRPS*RAQLHT
Trigger: TGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTC...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCGAGGGCAGACCCAGCTaGCGAGCACAGCTCCACACA +
Preference number: 4 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPEGRPS*RAQLHT
Trigger: TGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTC...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTAGGAGGCAGAGGGTTTaGAATAAAAGTAATGCATTC +
Preference number: 4 (lower is better)
Translates to: AGGHDGCGPHWTAWRSPGRRQRV*NKSNAF
Trigger: GAATGCATTACTTTTATTTCAAACCCTCTGCCTCCT...ACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441123.1
CDS-3UTR TCA 90 bp GTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGAGGCACAGAGTCCACAGCTaGCCAACTACCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VSTAKGKVCGWEVVSWGRHRVHS*PTTWGE
Trigger: CTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTG...CCTCCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CTCTGTCCCCATCGTCTTCTGGCTCCTCCTGCAAGGCCTGCTCCAGCACAGCTGCCCGGTTCTCTGGGATaGGGATGTTGTCCACGTCTT +
Preference number: 4 (lower is better)
Translates to: LCPHRLLAPPARPAPAQLPGSLG*GCCPRL
Trigger: AAGACGTGGACAACATCCTCATCCCAGAGAACCGGG...CAGCTGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCATACTGTCTTGTTGAGTaGTGGTGGCTGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AQSLAYHERGKLPAIHLAYCLVE*WWLWWW
Trigger: CCACCACCACAGCCACCATCACTCAACAAGACAGTA...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTTCTTGAAGAGGACTaGTGTGCGGCGACCCACACC +
Preference number: 4 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHLLEED*CAATHT
Trigger: GGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAAG...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGCTTCTTGAAGAGGACTaGTGTGCGGCGACCCACACC +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLLLEED*CAATHT
Trigger: GGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAAG...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATTCTTGGCCTTCTTaGAGAGGACTGATGTGCGGC +
Preference number: 4 (lower is better)
Translates to: GEKAQSLAYHERGKLPAIHSWPS*RGLMCG
Trigger: GCCGCACATCAGTCCTCTTCAAGAAGGCCAAGAATG...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAGGGTTTCTTGGACTTaGCAGGGAACTGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQRVSWT*QGTEAV
Trigger: AACAGCCTCAGTTCCCTGGCAAGTCCAAGAAACCCT...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AGGAGAGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTGTGCTTCTGGCTGGATaGCTGAGTCCACCATACGGA +
Preference number: 4 (lower is better)
Translates to: RRACHTMVLAILQDPVWAVLLAG*LSPPYG
Trigger: TCCGTATGGTGGACTCAGGCATCCAGCCAGAAGCAC...AGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGGTGCTTCTGGCTGGATaGCTGAGTCCACCATACGGA +
Preference number: 4 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVVLLAG*LSPPYG
Trigger: TCCGTATGGTGGACTCAGGCATCCAGCCAGAAGCAC...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGTTGGGCCCCACTGCTaGGACTCTCCAAGTATGACT +
Preference number: 4 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVIVGPHC*DSPSMT
Trigger: AGTCATACTTGGAGAGTCGCAGCAGTGGGGCCCAAC...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAACTGTTGGGCCCCACTaGTGCGACTCTCCAAGTATG +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAETVGPH*CDSPSM
Trigger: CATACTTGGAGAGTCGCAGCAGTGGGGCCCAACAGT...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACACTGTTGGGCCCCACTaGTGCGACTCTCCAAGTATG +
Preference number: 4 (lower is better)
Translates to: PWDPGVSTASLGSVSEPHTVGPH*CDSPSM
Trigger: CATACTTGGAGAGTCGCAGCAGTGGGGCCCAACAGT...GTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGACTGTTGGGCCCCACTaGTGCGACTCTCCAAGTATG +
Preference number: 4 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVTVGPH*CDSPSM
Trigger: CATACTTGGAGAGTCGCAGCAGTGGGGCCCAACAGT...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAACCACATGGGCCCAGTaGCCATCACTGGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAETTWAQ*PSLVCL
Trigger: CAAACAGACCAGTGATGGGCACTGGGCCCATGTGGT...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGACCACATGGGCCCAGTaGCCATCACTGGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVTTWAQ*PSLVCL
Trigger: CAAACAGACCAGTGATGGGCACTGGGCCCATGTGGT...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCACCACATGGGCCCAGTaGCCATCACTGGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCTTWAQ*PSLVCL
Trigger: CAAACAGACCAGTGATGGGCACTGGGCCCATGTGGT...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAAGACTGCAGATGGGAGTaGAAGCGCCGGATAAGAGGG +
Preference number: 4 (lower is better)
Translates to: DSPWDPGVSTASLGSVSEDCRWE*KRRIRG
Trigger: CCCTCTTATCCGGCGCTTGCACTCCCATCTGCAGTC...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTGACTGCAGATGGGAGTaGAAGCGCCGGATAAGAGGG +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASDCRWE*KRRIRG
Trigger: CCCTCTTATCCGGCGCTTGCACTCCCATCTGCAGTC...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGCTTGTCTTCTCATCCTaGTCTCGCTGCTCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQLVFSS*SRCSAF
Trigger: AAACGCTGAGCAGCGAGAGCAGGATGAGAAGACAAG...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCTTCGCTCTCACTACAGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCCAGCTCCTCCTTCACTaGACTTGTCTTCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: PFALTTAPAPWPLPGVALQLLLH*TCLLIL
Trigger: CAGGATGAGAAGACAAGTGCAGTGAAGGAGGAGCTG...GAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGAGAGCGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp TCACTACAGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGGCAGGATCCTTCTCCTaGAGCAGGTCCAGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: SLQLLLLGRFREWRSSSMAGSFS*SRSSVV
Trigger: GACAACACTGGACCTGCTGCAGGAGAAGGATCCTGC...CATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCCAAACTCCTCCAAGGTaGGGTACAGGTGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLQTPPR*GTGGTP
Trigger: TGGAGTCCCACCTGTACCGCACCTTGGAGGAGTTTG...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCAAACTCCTCCAAGGTaGGGTACAGGTGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: PWDPGVSTASLGSVSEPHQTPPR*GTGGTP
Trigger: TGGAGTCCCACCTGTACCGCACCTTGGAGGAGTTTG...GTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp TTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTCCGCAGGCGGACAGCTaGTCGGTGGAAAATTGTGTC +
Preference number: 4 (lower is better)
Translates to: LGRFPLGPWRIHGISGISPQADS*SVENCV
Trigger: GACACAATTTTCCACCGAGCAGCTGTCCGCCTGCGG...ACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCCAAAGCCGTTGGTCATaGCGTCTTCCCAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLQSRWS*RLPRRS
Trigger: GCTTCTCCTGGGAAGACGGCATGACCAACGGCTTTG...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339717.11
ENST00000449261.6
CDS-3UTR GCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTGCCTCTGCCTGTTTCTaGTCTCCCAGCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCASACF*SPSFST
Trigger: CGTGCTGAAGCTGGGAGAGCAGAAACAGGCAGAGGC...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACTCCCTTGGAAGCCACTaGCAGGTGCGCTTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: PWDPGVSTASLGSVSEPHSLGSH*QVRLLS
Trigger: TGACAACAAGCGCACCTGGCAGTGGCTTCCAAGGGA...GTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AGTGACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCAGACTGGGCAATGGGTaGAGAAGATGGGACCGAGAA +
Preference number: 4 (lower is better)
Translates to: SDEGVGPPDSAQVDHRTVRLGNG*RRWDRE
Trigger: TTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCT...GACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAAGACTGGGCAATGGGTaGAGAAGATGGGACCGAGAA +
Preference number: 4 (lower is better)
Translates to: AQSLAYHERGKLPAIHLARLGNG*RRWDRE
Trigger: TTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCT...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCCAGGGGGCACACTTaGAGAGCTGGGAAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVSRGHT*RAGKLC
Trigger: ACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGA...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGGCCTGCAACTGGCCCTaGGACTTTGGTGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: VVSTAKGKVCGWEVVSWGACNWP*DFGAQE
Trigger: CTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC...CCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTGGTGGTGGTGGCTGTaGCAGCTTCTGCCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTWWWWL*QLLPKG
Trigger: GCCCTTCGGCAGAAGCTGGCACAGCCACCACCACCA...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGTCTTCTGGCTCCTCCTaGAAGGCCTGCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLSSGSS*KACSST
Trigger: TGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGA...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCGGCGCTCTTCCTCGATaGTGGCTGGAGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPGALPR*WLERQE
Trigger: CTCCTGCCTCTCCAGCCAGCATCGAGGAAGAGCGCC...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR GCA 90 bp AGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTTCTCACTACAGCTCCTaGTCCTTGGCCGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: RSQSPQLTNYLGRGEALASHYSS*SLAASG
Trigger: CCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGAGA...AGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR GCA 90 bp AGTGACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCCAAAGCCGTTGGTCATaGCTGTCTCTTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SDEGVGPPDSAQVDHRTVQSRWS*LSLPPA
Trigger: AGCAGGAGGAAGAGACAGGCATGACCAACGGCTTTG...GACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000534400.5
CDS-3UTR GCA 90 bp GAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCCTGCAAGCTTCAAATaGCAGTCCACCACTGAGACC +
Preference number: 4 (lower is better)
Translates to: EGVGPPDSAQVDHRTVIGPASFK*QSTTET
Trigger: GGTCTCAGTGGTGGACTGGCATTTGAAGCTTGCAGG...GCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000441730.2
CDS-3UTR GCA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTCAGGAGGCTTCTGCCTaGAAGCTTCAAATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGQEASA*KLQMPV
Trigger: GACTGGCATTTGAAGCTTGCAGGCAGAAGCCTCCTG...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441730.2
CDS-3UTR CCA 90 bp GTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGAGGGGGGGTGCTTCTGGCTaGATGCCTGAGTCCACCATA +
Preference number: 4 (lower is better)
Translates to: VSTAKGKVCGWEVVSWGRGGASG*MPESTI
Trigger: TATGGTGGACTCAGGCATCCAGCCAGAAGCACCCCC...CCTCCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAATCGATGAGTGACTGTTaGGCCCCACTGCTGCGACTC +
Preference number: 4 (lower is better)
Translates to: DSPWDPGVSTASLGSVSESMSDC*APLLRL
Trigger: GAGTCGCAGCAGTGGGGCCCAACAGTCACTCATCGA...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGCCGTTTCTCGATGAGTGACTGTTaGGCCCCACTGCTGCGACTC +
Preference number: 4 (lower is better)
Translates to: QTRQRHIGPVPQQDLSRFSMSDC*APLLRL
Trigger: GAGTCGCAGCAGTGGGGCCCAACAGTCACTCATCGA...GAAACGGCTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTAGTGGCCGCACCTGGTaGCGAGTGGGCCTCACAGTA +
Preference number: 4 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTSGRTW*RVGLTV
Trigger: TACTGTGAGGCCCACTCGCCACCAGGTGCGGCCACT...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGAGGCAAGCATGGGGAGAGTaGAGGGTGTGTCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VSTAKGKVCGWEVVSWGRQAWGE*RVCLGL
Trigger: CAGGCCAAGACACACCCTCCACTCTCCCCATGCTTG...CCTCCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCAAGCATGGGGAGAGTaGAGGGTGTGTCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASQAWGE*RVCLGL
Trigger: CAGGCCAAGACACACCCTCCACTCTCCCCATGCTTG...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CTCTGTCCCCATCGTCTTCTGGCTCCTCCTGCAAGGCCTGCTCCAGCACAGCTGTCCATGGCAGCCTGCTaGACTTTGACCTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: LCPHRLLAPPARPAPAQLSMAAC*TLTCSR
Trigger: ACGAGAGCAGGTCAAAGTCCAGCAGGCTGCCATGGA...CAGCTGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp CCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCTCCATGGCAGCCTGCTaGACTTTGACCTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: PGTLAYPRHLWDQCRNLTSMAAC*TLTCSR
Trigger: ACGAGAGCAGGTCAAAGTCCAGCAGGCTGCCATGGA...GGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGAAGGTGCGGTACAGGTaGGACTCCAGCTTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWKVRYR*DSSFRL
Trigger: GAGGCGGAAGCTGGAGTCCCACCTGTACCGCACCTT...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGAAGGTGCGGTACAGGTaGGACTCCAGCTTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGKVRYR*DSSFRL
Trigger: GAGGCGGAAGCTGGAGTCCCACCTGTACCGCACCTT...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCCCTTCCCACGGCTGCGTTTaGGGGGCGTCAGACCACTGC +
Preference number: 4 (lower is better)
Translates to: HLELVHGVFHTQGQDFVPSHGCV*GASDHC
Trigger: GCAGTGGTCTGACGCCCCCCAAACGCAGCCGTGGGA...AGGGACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449261.6
ENST00000534400.5
CDS-3UTR CCA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACAGGACTTTGTCCCTTaGAAGCCACTGCCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: DSPWDPGVSTASLGSVSEQDFVP*KPLPGA
Trigger: CGCACCTGGCAGTGGCTTCCAAGGGACAAAGTCCTG...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTTGGGTGGGAGTTTTTaGCACACAGCAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVLGGSF*HTAGLP
Trigger: TGGCAGGCCTGCTGTGTGCCAAAAACTCCCACCCAA...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCTCCCCTGAGGGACCTTaGGTGGGAGTTTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCSPEGP*VGVFGT
Trigger: TGTGCCAAAAACTCCCACCCAAGGTCCCTCAGGGGA...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACCTGCACTGACTTGCGGAGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LCSGGSSHGHRPPALTCGGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...TCCGCAAGTCAGTGCAGGTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTATTAGTGGGAGTAGGATaGAGCGGGCCAGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLLVGVG*SGPGSP
Trigger: GGGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAA...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTAGTGGGAGTAGGATaGAGCGGGCCAGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTLVGVG*SGPGSP
Trigger: GGGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAA...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAAGCAAGACTGGGCAATaGGTGCAGAAGATGGGACCG +
Preference number: 4 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVISKTGQ*VQKMGP
Trigger: CGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCT...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CTCTGTCCCCATCGTCTTCTGGCTCCTCCTGCAAGGCCTGCTCCAGCACAGCTGAGCAAGACTGGGCAATaGGTGCAGAAGATGGGACCG +
Preference number: 4 (lower is better)
Translates to: LCPHRLLAPPARPAPAQLSKTGQ*VQKMGP
Trigger: CGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCT...CAGCTGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTCCCACCCTGAAGGCTTaGACCACCTCGTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: IHGISGISVGTSPALRCSPTLKA*TTSWQQ
Trigger: TTGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGG...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAACCCTCGACATCCATGTaGACAGATGGACACTCGCAC +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAEPSTSM*TDGHSH
Trigger: GTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGG...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCAGGAAGATGTTTGGTaGCAGGCGCCATGCCATCCA +
Preference number: 4 (lower is better)
Translates to: PGTLAYPRHLWDQCRNLTQEDVW*QAPCHP
Trigger: TGGATGGCATGGCGCCTGCCACCAAACATCTTCCTG...GGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGCCAGGAAGATGTTTaGTGGCAGGCGCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISGQEDV*WQAPCH
Trigger: ATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCC...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAACTGGCCCTGCGACTTTaGTGCTCAGGAGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAELALRL*CSGGEK
Trigger: CTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAG...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTTCAGCGGCCTGCAACTaGCCCTGCGACTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RSQSPQLTNYLGRGEALASAACN*PCDFGA
Trigger: AGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGA...AGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCCCCCACTGGACCGCATaGCGCTCACCAGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPPHWTA*RSPGPV
Trigger: AACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGG...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR CCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTATGGCTGTGGTGGTGGTaGCTGTGCCAGCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLWLWWW*LCQLLP
Trigger: CGGCAGAAGCTGGCACAGCCACCACCACCACAGCCA...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGGTCCCCATCGTCTTCTaGCTCCTCCTGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWVPIVF*LLLQGL
Trigger: CAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGAC...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CCA 90 bp GCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGGGCCGCTTCCGGGAGTaGCGCTCTTCCTCGATGCTG +
Preference number: 4 (lower is better)
Translates to: ACNWPCDFGAQEVKRNVQGRFRE*RSSSML
Trigger: CAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCC...CTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
3UTR CAA 72 bp CCGGCCGGGGTGTCAGGGGCCATGAGGGATAGTCTGTaGATGCCATTGTCACTGAGCAAGCGTTGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PAGVSGAMRDSL*MPLSLSKRCKG
Trigger: GCCTTTGCAACGCTTGCTCAGTGACAATGGCATCAACAGACTATCCCTCATGGCCCCTGACACCCCGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp TTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGGGTGGGTGAGCACTTaGGACTGTAGGGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: FQHLELVHGVFHTQGQDFGWVST*DCRGTG
Trigger: CCCCGTCCCCCTACAGTCTCAAGTGCTCACCCACCC...AAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GGGCTCCAGGGTTGGCGGAGGAGGCAGTTTGGAGTCATCTCTGTCCCCATCGTCGACTTGCCAGGGAACTaGGGCTGTTCACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GLQGWRRRQFGVISVPIVDLPGN*GCSLFS
Trigger: GGAAAACAGTGAACAGCCTCAGTTCCCTGGCAAGTC...GACGATGGGGACAGAGATGACTCCAAACTGCCTCCTCCGCCAACCCTGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGGCGACTCTCCAAGTATaGCTCTTTCTCAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVATLQV*LFLKPV
Trigger: GACCGGCTTGAGAAAGAGTCATACTTGGAGAGTCGC...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCGCGACTCTCCAAGTATaGCTCTTTCTCAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCATLQV*LFLKPV
Trigger: GACCGGCTTGAGAAAGAGTCATACTTGGAGAGTCGC...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGTCTTCATCGATGAGTaGCTGTTGGGCCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISVFIDE*LLGPTA
Trigger: AGCAGTGGGGCCCAACAGTCACTCATCGATGAAGAC...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp TTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCTTCATCGATGAGTaGCTGTTGGGCCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LGRFPLGPWRIHGISGISVFIDE*LLGPTA
Trigger: AGCAGTGGGGCCCAACAGTCACTCATCGATGAAGAC...ACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGAGGAAGCGTCTTCATCGATaGGTGACTGTTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: VSTAKGKVCGWEVVSWGRKRLHR*VTVGPH
Trigger: GTGGGGCCCAACAGTCACTCATCGATGAAGACGCTT...CCTCCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp TTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTAAGCGTCTTCATCGATaGGTGACTGTTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LGRFPLGPWRIHGISGISKRLHR*VTVGPH
Trigger: GTGGGGCCCAACAGTCACTCATCGATGAAGACGCTT...ACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCATCACTGGTCTGTTTaGAGGCGCCACCCTTATTGG +
Preference number: 4 (lower is better)
Translates to: PWDPGVSTASLGSVSEPHHHWSV*RRHPYW
Trigger: CCAATAAGGGTGGCGCCTTCAAACAGACCAGTGATG...GTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGCATCACTGGTCTGTTTaGAGGCGCCACCCTTATTGG +
Preference number: 4 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVHHWSV*RRHPYW
Trigger: CCAATAAGGGTGGCGCCTTCAAACAGACCAGTGATG...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp TTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTTCTTGGGCACTCCCTTaGGGGAGCCACTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: FQHLELVHGVFHTQGQDFSWALP*GSHSPR
Trigger: GCGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGA...AAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGAACTGGTTTTTCCTCTaGAAGGAGAGACCACTACAG +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPNWFFL*KERPLQ
Trigger: CTGTAGTGGTCTCTCCTTTCAGAGGAAAAACCAGTT...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACTCCTCAACAGAACATTaGATGGCATCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GVGPPDSAQVDHRTVIGHSSTEH*MASAPA
Trigger: AGCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGA...GTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGACAGGTAGCTGGAAGTaGCGAAGGAGTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ACNWPCDFGAQEVKRNVQTGSWK*RRSGAP
Trigger: GGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGT...CTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAAGAGGGGACCCGCCTTaGTCCAGGGGGCACACTTGC +
Preference number: 4 (lower is better)
Translates to: ALIQGAHLQSWEVVSTAKRGDPP*SRGHTC
Trigger: GCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCT...TTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGAGGGCAGACCCAGCTaGCGAGCACAGCTCCACACA +
Preference number: 4 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLEGRPS*RAQLHT
Trigger: TGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTC...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATATACTGTCTTGTTGAGTaGTGGTGGCTGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVIYCLVE*WWLWWW
Trigger: CCACCACCACAGCCACCATCACTCAACAAGACAGTA...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTCTTGAAGAGGACTaGTGTGCGGCGACCCACACC +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLALLEED*CAATHT
Trigger: GGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAAG...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGCATCTTGGGATCGATaGTCTGTCTCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVIASWDR*SVSSSC
Trigger: GCAGGAGGAAGAGACAGATCATCGATCCCAAGATGC...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532330.5
CDS-3UTR GCA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAGTTGGGCCCCACTGCTaGGACTCTCCAAGTATGACT +
Preference number: 4 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSVGPHC*DSPSMT
Trigger: AGTCATACTTGGAGAGTCGCAGCAGTGGGGCCCAAC...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTTATTGGGGCAAAGGATaGAATCCACAGGCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCYWGKG*NPQAGR
Trigger: CCTCCCGGCCTGTGGATTGCATCCTTTGCCCCAATA...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATTATTGGGGCAAAGGATaGAATCCACAGGCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHYWGKG*NPQAGR
Trigger: CCTCCCGGCCTGTGGATTGCATCCTTTGCCCCAATA...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGTGTGTCTTGGCCTaGTTCCTCTGGCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISGCVLA*FLWLLL
Trigger: AAGAAGGAGCCAGAGGAAGCAGGCCAAGACACACCC...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTGACTGCAGATGGGAGTaGAAGCGCCGGATAAGAGGG +
Preference number: 4 (lower is better)
Translates to: RSQSPQLTNYLGRGEALADCRWE*KRRIRG
Trigger: CCCTCTTATCCGGCGCTTGCACTCCCATCTGCAGTC...AGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAAGCGTTTCTTTGGGACTaGAGATGGGAGTGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: DSPWDPGVSTASLGSVSEAFLWD*RWECKR
Trigger: GCGCTTGCACTCCCATCTGCAGTCCCAAAGAAACGC...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATGCGTTTCTTTGGGACTaGAGATGGGAGTGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHAFLWD*RWECKR
Trigger: GCGCTTGCACTCCCATCTGCAGTCCCAAAGAAACGC...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCATCATCCTGCTCTCGCTaGTCAGCGTTTCTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAASSCSR*SAFLWD
Trigger: GTCCCAAAGAAACGCTGAGCAGCGAGAGCAGGATGA...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGTCATCCTGCTCTCGCTaGTCAGCGTTTCTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRSSCSR*SAFLWD
Trigger: GTCCCAAAGAAACGCTGAGCAGCGAGAGCAGGATGA...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACAGCTCCTCCTTCACTaGACTTGTCTTCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: GEKAQSLAYHERGKLPAIQLLLH*TCLLIL
Trigger: CAGGATGAGAAGACAAGTGCAGTGAAGGAGGAGCTG...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCACAGCTCCTCCTTCACTaGACTTGTCTTCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: AQSLAYHERGKLPAIHLAQLLLH*TCLLIL
Trigger: CAGGATGAGAAGACAAGTGCAGTGAAGGAGGAGCTG...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATGCAGGATCCTTCTCCTaGAGCAGGTCCAGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHAGSFS*SRSSVV
Trigger: GACAACACTGGACCTGCTGCAGGAGAAGGATCCTGC...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGGCCTCTGCCTGTTTCTaGTCTCCCAGCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: PARRTMRLVKTGALPLVGASACF*SPSFST
Trigger: CGTGCTGAAGCTGGGAGAGCAGAAACAGGCAGAGGC...CCCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATTCCCTTGGAAGCCACTaGCAGGTGCGCTTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHSLGSH*QVRLLS
Trigger: TGACAACAAGCGCACCTGGCAGTGGCTTCCAAGGGA...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp TTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGAGCCCAGGACCTCTTaGCATCTGGGCAATCTCCTA +
Preference number: 4 (lower is better)
Translates to: LGRFPLGPWRIHGISGISEPRTS*HLGNLL
Trigger: TAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTC...ACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAGAGCCCAGGACCTCTTaGCATCTGGGCAATCTCCTA +
Preference number: 4 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSEPRTS*HLGNLL
Trigger: TAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTC...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGAGCCCAGGACCTCTTaGCATCTGGGCAATCTCCTA +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLEPRTS*HLGNLL
Trigger: TAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTC...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGTGGTGGCAGGCGCCATaGCATCCAGGTGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: ACNWPCDFGAQEVKRNVQWWQAP*HPGGGE
Trigger: CTCTCCACCACCTGGATGGCATGGCGCCTGCCACCA...CTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTAGCCTGCAACTGGCCCTaGGACTTTGGTGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLACNWP*DFGAQE
Trigger: CTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGTGGCAATCAGCGGCCTaGAACTGGCCCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWWQSAA*NWPCDF
Trigger: AAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCA...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGCAGCTCCTTCAGCTaGACCTCTGGGGACAAATGG +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCSSSFS*TSGDKW
Trigger: CCATTTGTCCCCAGAGGTGCAGCTGAAGGAGCTGCT...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp ATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAATCTTCTGGCTCCTCCTaGAAGGCCTGCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: MAISGLQLALRLWCSGGESSGSS*KACSST
Trigger: TGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGA...TTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR GCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTACTCAGACAAGGAAGGTaGAGGCCCAGTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLLRQGR*RPSGLQ
Trigger: CTGGAGCCCACTGGGCCTGCACCTTCCTTGTCTGAG...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp AGTGACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCTCACTGAGCAAGCGTTaGAAAGGCTCATTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: SDEGVGPPDSAQVDHRTVSLSKR*KGSFPS
Trigger: GCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGA...GACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCAGAGGCAGGAGAGCCTaGCACACCATGGTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVRGRRA*HTMVLA
Trigger: GGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCT...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCAAAGCCGTTGGTCATaGCTGTCTCTTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PWDPGVSTASLGSVSEPHQSRWS*LSLPPA
Trigger: AGCAGGAGGAAGAGACAGGCATGACCAACGGCTTTG...GTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000534400.5
CDS-3UTR GCA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATACAAAGCCGTTGGTCATaGCTGTCTCTTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVIQSRWS*LSLPPA
Trigger: AGCAGGAGGAAGAGACAGGCATGACCAACGGCTTTG...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000534400.5
CDS-3UTR CCA 90 bp GACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTCCAGTTTCTCCACATTCGGTGATATCCTaGGCAGTTAGCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: DGCGPHWTAWRSPGPVSPHSVIS*AVSSSS
Trigger: TGAAGATGAGCTAACTGCCCAGGATATCACCGAATG...TGGAGAAACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGCATTCGGTGATATCCTaGGCAGTTAGCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPHSVIS*AVSSSS
Trigger: TGAAGATGAGCTAACTGCCCAGGATATCACCGAATG...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGTCGATGAGTGACTGTTaGGCCCCACTGCTGCGACTC +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGSMSDC*APLLRL
Trigger: GAGTCGCAGCAGTGGGGCCCAACAGTCACTCATCGA...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCAGGCGCCACCCTTATTaGGGCAAAGGATGCAATCCA +
Preference number: 4 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLRRHPY*GKGCNP
Trigger: TGGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCT...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGTTGGCCTGCTTCCTCTaGCTCCTTCTTGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQLACFL*LLLDLL
Trigger: CAGAAGATCAAGAAGGAGCCAGAGGAAGCAGGCCAA...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCCAAGCATGGGGAGAGTaGAGGGTGTGTCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGQAWGE*RVCLGL
Trigger: CAGGCCAAGACACACCCTCCACTCTCCCCATGCTTG...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGTCCATGGCAGCCTGCTaGACTTTGACCTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLSMAAC*TLTCSR
Trigger: ACGAGAGCAGGTCAAAGTCCAGCAGGCTGCCATGGA...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACACAGGACTTTGTCCCTTaGAAGCCACTGCCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTQDFVP*KPLPGA
Trigger: CGCACCTGGCAGTGGCTTCCAAGGGACAAAGTCCTG...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGRKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp ATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: MAISGLQLALRLWCSGGERKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...TTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 4 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCGGAGAACCATGCGATTaGTCAAAACTGGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCGEPCD*SKLGPC
Trigger: GCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCC...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGGGAGAACCATGCGATTaGTCAAAACTGGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRGEPCD*SKLGPC
Trigger: GCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCC...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTCTCTTTGGGTGGGAGTTTTTaGCACACAGCAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SLPHHGPRHSPGPCLGFSLGGSF*HTAGLP
Trigger: TGGCAGGCCTGCTGTGTGCCAAAAACTCCCACCCAA...AGAGAAGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTCTGAGGGACCTTGGGTaGGAGTTTTTGGCACACAGC +
Preference number: 4 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISLRDLG*EFLAHS
Trigger: GCTGTGTGCCAAAAACTCCCACCCAAGGTCCCTCAG...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGAGGGACCTTGGGTaGGAGTTTTTGGCACACAGC +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASLRDLG*EFLAHS
Trigger: GCTGTGTGCCAAAAACTCCCACCCAAGGTCCCTCAG...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTTCCCCTGAGGGACCTTaGGTGGGAGTTTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCSPEGP*VGVFGT
Trigger: TGTGCCAAAAACTCCCACCCAAGGTCCCTCAGGGGA...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTATCCACGGCATCTCTaGGATCAGTGTCGGAACCTC +
Preference number: 4 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVYPRHL*DQCRNL
Trigger: GAGGTTCCGACACTGATCCCAGAGATGCCGTGGATA...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTATCCACGGCATCTCTaGGATCAGTGTCGGAACCTC +
Preference number: 4 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVYPRHL*DQCRNL
Trigger: GAGGTTCCGACACTGATCCCAGAGATGCCGTGGATA...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCTTCCCCCTGGGACCCTaGCGTATCCACGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPFPLGP*RIHGIS
Trigger: AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAA...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTATTCCCCCTGGGACCCTaGCGTATCCACGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLFPLGP*RIHGIS
Trigger: AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAA...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCTGGGGAGATTCCCCCTaGGACCCTGGCGTATCCACG +
Preference number: 4 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVWGDSP*DPGVST
Trigger: CGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp AGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGTGGGGAGATTCCCCCTaGGACCCTGGCGTATCCACG +
Preference number: 4 (lower is better)
Translates to: STAPHKPPSTSMWTDGHSWGDSP*DPGVST
Trigger: CGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA...CGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAATCAACATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGTGGGGAGATTCCCCCTaGGACCCTGGCGTATCCACG +
Preference number: 4 (lower is better)
Translates to: KSTWQSAACNWPCDFGAQWGDSP*DPGVST
Trigger: CGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA...CTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCATGTTGATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAAGCAAGACTGGGCAATaGGTGCAGAAGATGGGACCG +
Preference number: 4 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSSKTGQ*VQKMGP
Trigger: CGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCT...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGCCCACCCTGAAGGCTTaGACCACCTCGTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWPTLKA*TTSWQQ
Trigger: TTGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGG...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTACCCACCCTGAAGGCTTaGACCACCTCGTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLPTLKA*TTSWQQ
Trigger: TTGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGG...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGCCCTCGACATCCATGTaGACAGATGGACACTCGCAC +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLPSTSM*TDGHSH
Trigger: GTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGG...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGCCGTTTCCCCTCGACATCCATGTaGACAGATGGACACTCGCAC +
Preference number: 4 (lower is better)
Translates to: QTRQRHIGPVPQQDLSRFPSTSM*TDGHSH
Trigger: GTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGG...GAAACGGCTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGATGCCATCCAGGTGGTaGAGAGTGAAGCTTAAGACT +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQMPSRW*RVKLKT
Trigger: AGTCTTAAGCTTCACTCTCCACCACCTGGATGGCAT...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGGCCATGCCATCCAGGTaGTGGAGAGTGAAGCTTAAG +
Preference number: 4 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRAMPSR*WRVKLK
Trigger: CTTAAGCTTCACTCTCCACCACCTGGATGGCATGGC...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCGCCATGCCATCCAGGTaGTGGAGAGTGAAGCTTAAG +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCAMPSR*WRVKLK
Trigger: CTTAAGCTTCACTCTCCACCACCTGGATGGCATGGC...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTGGCCAGGAAGATGTTTaGTGGCAGGCGCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: IHGISGISVGTSPALRCSGQEDV*WQAPCH
Trigger: ATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCC...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGGCCCTGCGACTTTaGTGCTCAGGAGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASLALRL*CSGGEK
Trigger: CTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAG...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTCACAGCAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGACCTCTGGGGACAAATaGGCCCGGTTCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: FTADATETHRPRATAGSETSGDK*ARFSGM
Trigger: CATCCCAGAGAACCGGGCCCATTTGTCCCCAGAGGT...CTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTGCTGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR CCA 90 bp CCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGCTTCAGCTGCACCTCTaGGGACAAATGGGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: PARRTMRLVKTGALPLVGLQLHL*GQMGPV
Trigger: AACCGGGCCCATTTGTCCCCAGAGGTGCAGCTGAAG...CCCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGGGGTGCGGGCCCCACTaGACCGCATGGCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWEGCGPH*TAWRSP
Trigger: TGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCC...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGACCCACACCACTAAGTaGGGTACCGGCCGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: ACNWPCDFGAQEVKRNVQTHTTK*GTGRGV
Trigger: GACACCCCGGCCGGTACCCCACTTAGTGGTGTGGGT...CTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR TCA 90 bp CAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGCCGTTTCGTGGGTCATAGATGCTaGTACGATGCAGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: QTRQRHIGPVPQQDLSRFVGHRC*YDAGVH
Trigger: ATGGACGCCTGCATCGTATCAGCATCTATGACCCAC...GAAACGGCTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAAGTGGGTCATAGATGCTaGTACGATGCAGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: DSPWDPGVSTASLGSVSEVGHRC*YDAGVH
Trigger: ATGGACGCCTGCATCGTATCAGCATCTATGACCCAC...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGACTTGCCAGGGAACTaGGGCTGTTCACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISDLPGN*GCSLFS
Trigger: GGAAAACAGTGAACAGCCTCAGTTCCCTGGCAAGTC...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCCTTTTTGCCCTTGGATaGGGGTTTCTTGGACTTGCC +
Preference number: 4 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLLFALG*GFLGLA
Trigger: GGCAAGTCCAAGAAACCCTCATCCAAGGGCAAAAAG...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTGCGACTCTCCAAGTATaGCTCTTTCTCAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCATLQV*LFLKPV
Trigger: GACCGGCTTGAGAAAGAGTCATACTTGGAGAGTCGC...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATGCGACTCTCCAAGTATaGCTCTTTCTCAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHATLQV*LFLKPV
Trigger: GACCGGCTTGAGAAAGAGTCATACTTGGAGAGTCGC...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGTCTTCATCGATGAGTaGCTGTTGGGCCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGVFIDE*LLGPTA
Trigger: AGCAGTGGGGCCCAACAGTCACTCATCGATGAAGAC...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCGTCTTCATCGATGAGTaGCTGTTGGGCCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLAVFIDE*LLGPTA
Trigger: AGCAGTGGGGCCCAACAGTCACTCATCGATGAAGAC...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp TTCTTGAAGAGGACTGATGTGCGGCGACCCACACCACTAAGTGGGGTACCGGCCAAGCGTCTTCATCGATaGGTGACTGTTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: FLKRTDVRRPTPLSGVPAKRLHR*VTVGPH
Trigger: GTGGGGCCCAACAGTCACTCATCGATGAAGACGCTT...GGCCGGTACCCCACTTAGTGGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCAAGCGTCTTCATCGATaGGTGACTGTTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLAKRLHR*VTVGPH
Trigger: GTGGGGCCCAACAGTCACTCATCGATGAAGACGCTT...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTATGGGCTCAATCTTCATaGAGAGCCCAGCCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLWAQSS*RAQPAV
Trigger: CACAGCGGGCTGGGCTCTTCATGAAGATTGAGCCCA...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCCCACTCACCCCGCCTTaGGCTTCCTGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLPLTPP*ASCSSS
Trigger: GGAAGAAGAGCAGGAAGCTCAAGGCGGGGTGAGTGG...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCTCTTGGGCACTCCCTTaGGGGAGCCACTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFSWALP*GSHSPR
Trigger: GCGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGA...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGTCCTCAACAGAACATTaGATGGCATCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSSSTEH*MASAPA
Trigger: AGCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGA...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCATGCCAGTCCACCACTaGGACCCAAACTACATTCAG +
Preference number: 4 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLMPVHH*DPNYIQ
Trigger: CTGAATGTAGTTTGGGTCTCAGTGGTGGACTGGCAT...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR TCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCCAGGAGGCTTCTGCCTaGGCCATTGTAGTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGQEASA*AIVVRV
Trigger: GACTCTGACTACAATGGCTCAGGCAGAAGCCTCCTG...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339717.11
ENST00000357641.10
CDS-3UTR TCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGATAGGCCACCTGCACTaGCTTGCGGATGCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGIGHLH*LADAGL
Trigger: AAGACCAGCATCCGCAAGTCAGTGCAGGTGGCCTAT...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGACAGGTAGCTGGAAGTaGCGAAGGAGTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKTGSWK*RRSGAP
Trigger: GGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGT...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp TTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTACAGGTAGCTGGAAGTaGCGAAGGAGTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: FQHLELVHGVFHTQGQDFTGSWK*RRSGAP
Trigger: GGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGT...AAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCAAAAGACCAGTGTGGTaGCGGTTTCTGTCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: EGVGPPDSAQVDHRTVIGKRPVW*RFLSVW
Trigger: CCAAACTGACAGAAACCGTCACCACACTGGTCTTTT...GCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGTGGCCTCAAGGGGAATaGGACATTAAAGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPWPQGE*DIKEKD
Trigger: GTCTTTTTCTTTAATGTCTCATTCCCCTTGAGGCCA...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTGGATACTGTCTTGTTaGGTGATGGTGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVWILSC*VMVAVV
Trigger: CACCACAGCCACCATCACTCAACAAGACAGTATCCA...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCTGGATACTGTCTTGTTaGGTGATGGTGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCWILSC*VMVAVV
Trigger: CACCACAGCCACCATCACTCAACAAGACAGTATCCA...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGGCAGACACCAAACTGTaGCCATCTACTCGCCGTTTT +
Preference number: 4 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRADTKL*PSTRRF
Trigger: AAAACGGCGAGTAGATGGGCACAGTTTGGTGTCTGC...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGTTGGGCCCCACTGCTaGGACTCTCCAAGTATGACT +
Preference number: 4 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWVGPHC*DSPSMT
Trigger: AGTCATACTTGGAGAGTCGCAGCAGTGGGGCCCAAC...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAACTGTTGGGCCCCACTaGTGCGACTCTCCAAGTATG +
Preference number: 4 (lower is better)
Translates to: MAISGLQLALRLWCSGGETVGPH*CDSPSM
Trigger: CATACTTGGAGAGTCGCAGCAGTGGGGCCCAACAGT...TTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGTATTGGGGCAAAGGATaGAATCCACAGGCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGYWGKG*NPQAGR
Trigger: CCTCCCGGCCTGTGGATTGCATCCTTTGCCCCAATA...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCGGGTGTGTCTTGGCCTaGTTCCTCTGGCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLAGCVLA*FLWLLL
Trigger: AAGAAGGAGCCAGAGGAAGCAGGCCAAGACACACCC...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCGACTGCAGATGGGAGTaGAAGCGCCGGATAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPDCRWE*KRRIRG
Trigger: CCCTCTTATCCGGCGCTTGCACTCCCATCTGCAGTC...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGTCATCCTGCTCTCGCTaGTCAGCGTTTCTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLSSCSR*SAFLWD
Trigger: GTCCCAAAGAAACGCTGAGCAGCGAGAGCAGGATGA...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAATCATCCTGCTCTCGCTaGTCAGCGTTTCTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: DSPWDPGVSTASLGSVSESSCSR*SAFLWD
Trigger: GTCCCAAAGAAACGCTGAGCAGCGAGAGCAGGATGA...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCACTTGTCTTCTCATCCTaGTCTCGCTGCTCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAALVFSS*SRCSAF
Trigger: AAACGCTGAGCAGCGAGAGCAGGATGAGAAGACAAG...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GGGCTCCAGGGTTGGCGGAGGAGGCAGTTTGGAGTCATCTCTGTCCCCATCGTCCTTGTCTTCTCATCCTaGTCTCGCTGCTCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: GLQGWRRRQFGVISVPIVLVFSS*SRCSAF
Trigger: AAACGCTGAGCAGCGAGAGCAGGATGAGAAGACAAG...GACGATGGGGACAGAGATGACTCCAAACTGCCTCCTCCGCCAACCCTGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAATCATGCCGGAGCTTCTaGCAATACTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DSPWDPGVSTASLGSVSESCRSF*QYFSSS
Trigger: GGAGGAGCTGAAGTATTGGCAGAAGCTCCGGCATGA...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCGCAGGATCCTTCTCCTaGAGCAGGTCCAGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLAAGSFS*SRSSVV
Trigger: GACAACACTGGACCTGCTGCAGGAGAAGGATCCTGC...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTTCTGCGAAGATGTGTaGAGGATCCTTCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVFCEDV*RILLLQ
Trigger: CTGCAGGAGAAGGATCCTGCACACATCTTCGCAGAA...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGCAAACTCCTCCAAGGTaGGGTACAGGTGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWQTPPR*GTGGTP
Trigger: TGGAGTCCCACCTGTACCGCACCTTGGAGGAGTTTG...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGCCGATGTTCTCTGCCTaGCGCCGGGCGTGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWEPMFSA*RRACRR
Trigger: CCTACGGCACGCCCGGCGGCAGGCAGAGAACATCGG...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGCAAAGCCGTTGGTCATaGCGTCTTCCCAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGQSRWS*RLPRRS
Trigger: GCTTCTCCTGGGAAGACGGCATGACCAACGGCTTTG...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339717.11
ENST00000449261.6
CDS-3UTR GCA 90 bp ATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAGGGGCGTCAGACCACTaGAAGCTTCAAATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: MAISGLQLALRLWCSGGEGASDH*KLQMPV
Trigger: GACTGGCATTTGAAGCTTGCAGTGGTCTGACGCCCC...TTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
CDS-3UTR GCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGGGGCGTCAGACCACTaGAAGCTTCAAATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGGASDH*KLQMPV
Trigger: GACTGGCATTTGAAGCTTGCAGTGGTCTGACGCCCC...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
CDS-3UTR GCA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTGCCTCTGCCTGTTTCTaGTCTCCCAGCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTASACF*SPSFST
Trigger: CGTGCTGAAGCTGGGAGAGCAGAAACAGGCAGAGGC...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCTCCCTTGGAAGCCACTaGCAGGTGCGCTTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLASLGSH*QVRLLS
Trigger: TGACAACAAGCGCACCTGGCAGTGGCTTCCAAGGGA...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTCTCTCTGCCAGGAGAACCATaGGATTGGTCAAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: SLPHHGPRHSPGPCLGFSLPGEP*DWSKLG
Trigger: CCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAG...AGAGAAGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTCTGCCAGGAGAACCATaGGATTGGTCAAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCLPGEP*DWSKLG
Trigger: CCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAG...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGGAGCCCAGGACCTCTTaGCATCTGGGCAATCTCCTA +
Preference number: 4 (lower is better)
Translates to: PARRTMRLVKTGALPLVGEPRTS*HLGNLL
Trigger: TAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTC...CCCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGAGGAGACTGGGCAATGGGTaGAGAAGATGGGACCGAGAA +
Preference number: 4 (lower is better)
Translates to: VSTAKGKVCGWEVVSWGRRLGNG*RRWDRE
Trigger: TTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCT...CCTCCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTAGACTGGGCAATGGGTaGAGAAGATGGGACCGAGAA +
Preference number: 4 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISRLGNG*RRWDRE
Trigger: TTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCT...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAAAGACTGGGCAATGGGTaGAGAAGATGGGACCGAGAA +
Preference number: 4 (lower is better)
Translates to: DSPWDPGVSTASLGSVSERLGNG*RRWDRE
Trigger: TTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCT...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGTCCAGGGGGCACACTTaGAGAGCTGGGAAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGSRGHT*RAGKLC
Trigger: ACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGA...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAATCCAGGGGGCACACTTaGAGAGCTGGGAAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: MAISGLQLALRLWCSGGESRGHT*RAGKLC
Trigger: ACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGA...TTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp TTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGTGGTGGCAGGCGCCATaGCATCCAGGTGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LQSWEVVSTAKGKVCGWEWWQAP*HPGGGE
Trigger: CTCTCCACCACCTGGATGGCATGGCGCCTGCCACCA...CTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp TTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTTGGTGGCAGGCGCCATaGCATCCAGGTGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: FQHLELVHGVFHTQGQDFWWQAP*HPGGGE
Trigger: CTCTCCACCACCTGGATGGCATGGCGCCTGCCACCA...AAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR GCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGTGGCAATCAGCGGCCTaGAACTGGCCCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWWQSAA*NWPCDF
Trigger: AAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCA...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCAGCAGCTCCTTCAGCTaGACCTCTGGGGACAAATGG +
Preference number: 4 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGSSSFS*TSGDKW
Trigger: CCATTTGTCCCCAGAGGTGCAGCTGAAGGAGCTGCT...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATGGCGCTCTTCCTCGATaGTGGCTGGAGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDGALPR*WLERQE
Trigger: CTCCTGCCTCTCCAGCCAGCATCGAGGAAGAGCGCC...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCATGGATGAGGGTTTCTTaGACTTGCCAGGGAACTGAG +
Preference number: 4 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAAWMRVS*TCQGTE
Trigger: CTCAGTTCCCTGGCAAGTCCAAGAAACCCTCATCCA...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTATCGATGAGTGACTGTTaGGCCCCACTGCTGCGACTC +
Preference number: 4 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLSMSDC*APLLRL
Trigger: GAGTCGCAGCAGTGGGGCCCAACAGTCACTCATCGA...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCCTTATGGCACTGGATaGCTGCACCTAGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASPYGTG*LHLALS
Trigger: AGAAAGGGCTAGGTGCAGCCATCCAGTGCCATAAGG...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGAGGTTCACCTTATGGCACTaGATGGCTGCACCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: VSTAKGKVCGWEVVSWGRFTLWH*MAAPSP
Trigger: AGGGCTAGGTGCAGCCATCCAGTGCCATAAGGTGAA...CCTCCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGAGTGGCCGCACCTGGTaGCGAGTGGGCCTCACAGTA +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKSGRTW*RVGLTV
Trigger: TACTGTGAGGCCCACTCGCCACCAGGTGCGGCCACT...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCTTGGCCTGCTTCCTCTaGCTCCTTCTTGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLLACFL*LLLDLL
Trigger: CAGAAGATCAAGAAGGAGCCAGAGGAAGCAGGCCAA...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATATTGGCCTGCTTCCTCTaGCTCCTTCTTGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVILACFL*LLLDLL
Trigger: CAGAAGATCAAGAAGGAGCCAGAGGAAGCAGGCCAA...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGCAAGCATGGGGAGAGTaGAGGGTGTGTCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWQAWGE*RVCLGL
Trigger: CAGGCCAAGACACACCCTCCACTCTCCCCATGCTTG...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGCTTTGGGACTGCAGATaGGAGTGCAAGCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWLWDCR*ECKRRI
Trigger: TATCCGGCGCTTGCACTCCCATCTGCAGTCCCAAAG...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCTCCATGGCAGCCTGCTaGACTTTGACCTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGSMAAC*TLTCSR
Trigger: ACGAGAGCAGGTCAAAGTCCAGCAGGCTGCCATGGA...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTCTCACTCAAGTTGACTaGTTCTGCGAAGATGTGTGC +
Preference number: 4 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGLTQVD*FCEDVC
Trigger: GCACACATCTTCGCAGAACCAGTCAACTTGAGTGAG...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCACGGACAGCTGCTCGGTaGAAAATTGTGTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: AQSLAYHERGKLPAIHLARTAAR*KIVSLA
Trigger: TGCTAAAGACACAATTTTCCACCGAGCAGCTGTCCG...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTGGGCGTGCCGTAGGATaGCCCCTCCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVGRAVG*PLPGPA
Trigger: TGCGGGACCTGGGAGGGGCCATCCTACGGCACGCCC...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp ACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACACAGGACTTTGTCCCTTaGAAGCCACTGCCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: TQLTSTAPHKPPSTSMWTQDFVP*KPLPGA
Trigger: CGCACCTGGCAGTGGCTTCCAAGGGACAAAGTCCTG...TGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGCTGTGCCCTGCGGGATaGAGGCAGGGCAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGLCPAG*RQGKRM
Trigger: CATCCGCTTGCCCTGCCTCCATCCCGCAGGGCACAG...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGCTGTGCCCTGCGGGATaGAGGCAGGGCAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLLCPAG*RQGKRM
Trigger: CATCCGCTTGCCCTGCCTCCATCCCGCAGGGCACAG...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAAGGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCGGAGAACCATGCGATTaGTCAAAACTGGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: KGGRGQTQLTSTAPHKPPGEPCD*SKLGPC
Trigger: GCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCC...GGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGCTGAGGGACCTTGGGTaGGAGTTTTTGGCACACAGC +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGLRDLG*EFLAHS
Trigger: GCTGTGTGCCAAAAACTCCCACCCAAGGTCCCTCAG...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTGAGGGACCTTGGGTaGGAGTTTTTGGCACACAGC +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLALRDLG*EFLAHS
Trigger: GCTGTGTGCCAAAAACTCCCACCCAAGGTCCCTCAG...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACCTGCACTGACTTGCGGACTGAGGGACCTTGGGTaGGAGTTTTTGGCACACAGC +
Preference number: 4 (lower is better)
Translates to: LCSGGSSHGHRPPALTCGLRDLG*EFLAHS
Trigger: GCTGTGTGCCAAAAACTCCCACCCAAGGTCCCTCAG...TCCGCAAGTCAGTGCAGGTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGTCCCCTGAGGGACCTTaGGTGGGAGTTTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGSPEGP*VGVFGT
Trigger: TGTGCCAAAAACTCCCACCCAAGGTCCCTCAGGGGA...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCTCCCCTGAGGGACCTTaGGTGGGAGTTTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGSPEGP*VGVFGT
Trigger: TGTGCCAAAAACTCCCACCCAAGGTCCCTCAGGGGA...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCATATCCACGGCATCTCTaGGATCAGTGTCGGAACCTC +
Preference number: 4 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSYPRHL*DQCRNL
Trigger: GAGGTTCCGACACTGATCCCAGAGATGCCGTGGATA...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGTATCCACGGCATCTCTaGGATCAGTGTCGGAACCTC +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLYPRHL*DQCRNL
Trigger: GAGGTTCCGACACTGATCCCAGAGATGCCGTGGATA...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AAGAGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTATCCACGGCATCTCTaGGATCAGTGTCGGAACCTC +
Preference number: 4 (lower is better)
Translates to: KRGPALIQGAHLQSWEVVYPRHL*DQCRNL
Trigger: GAGGTTCCGACACTGATCCCAGAGATGCCGTGGATA...CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATGGGGGTCATAGGTTGTaGGCTGGCCTCTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDGGHRL*AGLCLG
Trigger: GCCCAGACAGAGGCCAGCCCACAACCTATGACCCCC...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGCAGGAAGATGTTTGGTaGCAGGCGCCATGCCATCCA +
Preference number: 4 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWQEDVW*QAPCHP
Trigger: TGGATGGCATGGCGCCTGCCACCAAACATCTTCCTG...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGCCCCACTGGACCGCATaGCGCTCACCAGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LQSWEVVSTAKGKVCGWEPHWTA*RSPGPV
Trigger: AACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGG...CTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR CCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGACCCACACCACTAAGTaGGGTACCGGCCGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKTHTTK*GTGRGV
Trigger: GACACCCCGGCCGGTACCCCACTTAGTGGTGTGGGT...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGAGCCTGCCACACCATaGTCCTCGCCATTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLEPATP*SSPFSR
Trigger: CCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTC...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CCA 90 bp AGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGGAGCCTGCCACACCATaGTCCTCGCCATTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: STAPHKPPSTSMWTDGHSEPATP*SSPFSR
Trigger: CCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTC...CGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CCA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCGAGCCTGCCACACCATaGTCCTCGCCATTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVEPATP*SSPFSR
Trigger: CCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTC...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCGTGGGTCATAGATGCTaGTACGATGCAGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGVGHRC*YDAGVH
Trigger: ATGGACGCCTGCATCGTATCAGCATCTATGACCCAC...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACTTTTTGCCCTTGGATaGGGGTTTCTTGGACTTGCC +
Preference number: 4 (lower is better)
Translates to: DSPWDPGVSTASLGSVSELFALG*GFLGLA
Trigger: GGCAAGTCCAAGAAACCCTCATCCAAGGGCAAAAAG...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCACTTTTTGCCCTTGGATaGGGGTTTCTTGGACTTGCC +
Preference number: 4 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSLFALG*GFLGLA
Trigger: GGCAAGTCCAAGAAACCCTCATCCAAGGGCAAAAAG...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTCTTCATCGATGAGTaGCTGTTGGGCCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLVFIDE*LLGPTA
Trigger: AGCAGTGGGGCCCAACAGTCACTCATCGATGAAGAC...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAAAGCGTCTTCATCGATaGGTGACTGTTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLKRLHR*VTVGPH
Trigger: GTGGGGCCCAACAGTCACTCATCGATGAAGACGCTT...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AAATCAACATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGTGGGCTCAATCTTCATaGAGAGCCCAGCCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: KSTWQSAACNWPCDFGAQWAQSS*RAQPAV
Trigger: CACAGCGGGCTGGGCTCTTCATGAAGATTGAGCCCA...CTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCATGTTGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCCTCAACAGAACATTaGATGGCATCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVSSTEH*MASAPA
Trigger: AGCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGA...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCTCCTCAACAGAACATTaGATGGCATCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCSSTEH*MASAPA
Trigger: AGCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGA...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGGTCTTCCAATTTGGGTaGCTCGGGCAGGTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: ACNWPCDFGAQEVKRNVQVFQFG*LGQVSA
Trigger: GGCACTCACCTGCCCGAGTCACCCAAATTGGAAGAC...CTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTATGCCAGTCCACCACTaGGACCCAAACTACATTCAG +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCMPVHH*DPNYIQ
Trigger: CTGAATGTAGTTTGGGTCTCAGTGGTGGACTGGCAT...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534400.5
CDS-3UTR TCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAATAGGCCACCTGCACTaGCTTGCGGATGCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLIGHLH*LADAGL
Trigger: AAGACCAGCATCCGCAAGTCAGTGCAGGTGGCCTAT...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGACAGGTAGCTGGAAGTaGCGAAGGAGTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGTGSWK*RRSGAP
Trigger: GGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGT...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAGCCTCTGTCTGGGCCTaGGGAGCCTGGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: IWERESKTGQWVQKMGPRASVWA*GAWQRH
Trigger: GTGTCTCTGCCAGGCTCCTCAGGCCCAGACAGAGGC...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCAGGTGGTGGAGAGTaGAGCTTAAGACTGCAATTG +
Preference number: 4 (lower is better)
Translates to: DSPWDPGVSTASLGSVSEPGGGE*SLRLQL
Trigger: CAATTGCAGTCTTAAGCTTCACTCTCCACCACCTGG...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGCCAGGTGGTGGAGAGTaGAGCTTAAGACTGCAATTG +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLPGGGE*SLRLQL
Trigger: CAATTGCAGTCTTAAGCTTCACTCTCCACCACCTGG...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp TTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTTGGATACTGTCTTGTTaGGTGATGGTGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGRFPLGPWRIHGISGISWILSC*VMVAVV
Trigger: CACCACAGCCACCATCACTCAACAAGACAGTATCCA...ACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp AAATCAACATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGCTTCTTGAAGAGGACTaGTGTGCGGCGACCCACACC +
Preference number: 4 (lower is better)
Translates to: KSTWQSAACNWPCDFGAQLLEED*CAATHT
Trigger: GGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAAG...CTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCATGTTGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR TCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCATTCTTGGCCTTCTTaGAGAGGACTGATGTGCGGC +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLAHSWPS*RGLMCG
Trigger: GCCGCACATCAGTCCTCTTCAAGAAGGCCAAGAATG...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTCGGCCCTCGGCATTCTaGCGGGACTTCCGACGAGGC +
Preference number: 4 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVRPSAF*RDFRRG
Trigger: GCCTCGTCGGAAGTCCCGGCAGAATGCCGAGGGCCG...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGGGTTTCTTGGACTTaGCAGGGAACTGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCRVSWT*QGTEAV
Trigger: AACAGCCTCAGTTCCCTGGCAAGTCCAAGAAACCCT...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGAGGAGGGTTTCTTGGACTTaGCAGGGAACTGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: VSTAKGKVCGWEVVSWGRRVSWT*QGTEAV
Trigger: AACAGCCTCAGTTCCCTGGCAAGTCCAAGAAACCCT...CCTCCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCGAAGTACCAGATGCATaGTTGGAGCAGGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCEVPDA*LEQDSF
Trigger: GAAGGAATCCTGCTCCAAGCATGCATCTGGTACTTC...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACGAAGTACCAGATGCATaGTTGGAGCAGGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: PWDPGVSTASLGSVSEPHEVPDA*LEQDSF
Trigger: GAAGGAATCCTGCTCCAAGCATGCATCTGGTACTTC...GTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGGAAGGAAGTACCAGATaGATGCTTGGAGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVEGSTR*MLGAGF
Trigger: GAATCCTGCTCCAAGCATGCATCTGGTACTTCCTTC...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCGTTGGGCCCCACTGCTaGGACTCTCCAAGTATGACT +
Preference number: 4 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPVGPHC*DSPSMT
Trigger: AGTCATACTTGGAGAGTCGCAGCAGTGGGGCCCAAC...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGCTAGCCCTTTCTGCTTaGAGATATAGCAGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQLALSA*RYSRLV
Trigger: AACTAACCTGCTATATCTGCAAGCAGAAAGGGCTAG...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACCTGCACTGACTTGCGGATCATCCTGCTCTCGCTaGTCAGCGTTTCTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: LCSGGSSHGHRPPALTCGSSCSR*SAFLWD
Trigger: GTCCCAAAGAAACGCTGAGCAGCGAGAGCAGGATGA...TCCGCAAGTCAGTGCAGGTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGTCATCCTGCTCTCGCTaGTCAGCGTTTCTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGSSCSR*SAFLWD
Trigger: GTCCCAAAGAAACGCTGAGCAGCGAGAGCAGGATGA...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGTCATGCCGGAGCTTCTaGCAATACTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VVSTAKGKVCGWEVVSWGSCRSF*QYFSSS
Trigger: GGAGGAGCTGAAGTATTGGCAGAAGCTCCGGCATGA...CCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAATTCTGCGAAGATGTGTaGAGGATCCTTCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DSPWDPGVSTASLGSVSEFCEDV*RILLLQ
Trigger: CTGCAGGAGAAGGATCCTGCACACATCTTCGCAGAA...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTTTCTGCGAAGATGTGTaGAGGATCCTTCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASFCEDV*RILLLQ
Trigger: CTGCAGGAGAAGGATCCTGCACACATCTTCGCAGAA...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATTTCTGCGAAGATGTGTaGAGGATCCTTCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHFCEDV*RILLLQ
Trigger: CTGCAGGAGAAGGATCCTGCACACATCTTCGCAGAA...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGCAAGTTGACTGGTTCTaGGAAGATGTGTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRQVDWF*EDVCRI
Trigger: GATCCTGCACACATCTTCGCAGAACCAGTCAACTTG...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTACAAACTCCTCCAAGGTaGGGTACAGGTGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLQTPPR*GTGGTP
Trigger: TGGAGTCCCACCTGTACCGCACCTTGGAGGAGTTTG...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTACTGCAAGCTTCAAATaGCAGTCCACCACTGAGACC +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASTASFK*QSTTET
Trigger: GGTCTCAGTGGTGGACTGGCATTTGAAGCTTGCAGT...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
CDS-3UTR GCA 90 bp AAATCAACATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGCCTCTGCCTGTTTCTaGTCTCCCAGCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: KSTWQSAACNWPCDFGAQASACF*SPSFST
Trigger: CGTGCTGAAGCTGGGAGAGCAGAAACAGGCAGAGGC...CTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCATGTTGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCGAGCCCAGGACCTCTTaGCATCTGGGCAATCTCCTA +
Preference number: 4 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPEPRTS*HLGNLL
Trigger: TAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTC...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTCCAGGGGGCACACTTaGAGAGCTGGGAAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTSRGHT*RAGKLC
Trigger: ACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGA...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR GCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCTGGTGGCAGGCGCCATaGCATCCAGGTGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFWWQAP*HPGGGE
Trigger: CTCTCCACCACCTGGATGGCATGGCGCCTGCCACCA...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CAGGTGGGACTCCAGCTTCCGCCTCATAGTAGAAAAATCCATTGGCTTGGATATCTGCTCCAGCACAGCTaGATCCCCCTGGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QVGLQLPPHSRKIHWLGYLLQHS*IPLGPC
Trigger: GCAGGGCCCCAGGGGGATGCAGCTGTGCTGGAGCAG...ATATCCAAGCCAATGGATTTTTCTACTATGAGGCGGAAGCTGGAGTCCCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGTGGGCTTTAGGAACCTaGTTGGAGGTTTGCTATCAT +
Preference number: 4 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQWALGT*LEVCYH
Trigger: ATGATAGCAAACCTCCAAGCAGGTTCCTAAAGCCCA...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp TCACTACAGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCTTCCTCGATGGGCTCATTCCCTAGCTaGAGTGGTGATTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SLQLLLLGRFREWRSSSMGSFPS*SGDFSK
Trigger: CTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCC...CATCGAGGAAGAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGGCTCATTCCCTAGCTaGAGTGGTGATTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAEGSFPS*SGDFSK
Trigger: CTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCC...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGTCACTGAGCAAGCGTTaGAAAGGCTCATTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLSLSKR*KGSFPS
Trigger: GCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGA...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATTCACTGAGCAAGCGTTaGAAAGGCTCATTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHSLSKR*KGSFPS
Trigger: GCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGA...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp ATGCCATTGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTAGAGGCAGGAGAGCCTaGCACACCATGGTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: MPLSLSKRCKGSFPSCSGRGRRA*HTMVLA
Trigger: GGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCT...ACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp AGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGACAATCCGCTGGGCCTaGGCATATGTCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: STAPHKPPSTSMWTDGHSTIRWA*AYVRVS
Trigger: GGAGACCCTGACATATGCCCAGGCCCAGCGGATTGT...CGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAAGGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTGGATGAGGGTTTCTTaGACTTGCCAGGGAACTGAG +
Preference number: 4 (lower is better)
Translates to: KGGRGQTQLTSTAPHKPPWMRVS*TCQGTE
Trigger: CTCAGTTCCCTGGCAAGTCCAAGAAACCCTCATCCA...GGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTCTCTTGGATGAGGGTTTCTTaGACTTGCCAGGGAACTGAG +
Preference number: 4 (lower is better)
Translates to: SLPHHGPRHSPGPCLGFSWMRVS*TCQGTE
Trigger: CTCAGTTCCCTGGCAAGTCCAAGAAACCCTCATCCA...AGAGAAGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGAGGCGCCACCCTTATTaGGGCAAAGGATGCAATCCA +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGRRHPY*GKGCNP
Trigger: TGGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCT...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTATGGCACTGGATaGCTGCACCTAGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RSQSPQLTNYLGRGEALAPYGTG*LHLALS
Trigger: AGAAAGGGCTAGGTGCAGCCATCCAGTGCCATAAGG...AGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTTTCACCTTATGGCACTaGATGGCTGCACCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: IHGISGISVGTSPALRCSFTLWH*MAAPSP
Trigger: AGGGCTAGGTGCAGCCATCCAGTGCCATAAGGTGAA...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TTCTTGAAGAGGACTGATGTGCGGCGACCCACACCACTAAGTGGGGTACCGGCCTTCACCTTATGGCACTaGATGGCTGCACCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: FLKRTDVRRPTPLSGVPAFTLWH*MAAPSP
Trigger: AGGGCTAGGTGCAGCCATCCAGTGCCATAAGGTGAA...GGCCGGTACCCCACTTAGTGGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACATTCACCTTATGGCACTaGATGGCTGCACCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTFTLWH*MAAPSP
Trigger: AGGGCTAGGTGCAGCCATCCAGTGCCATAAGGTGAA...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAAGTGGCCGCACCTGGTaGCGAGTGGGCCTCACAGTA +
Preference number: 4 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRSGRTW*RVGLTV
Trigger: TACTGTGAGGCCCACTCGCCACCAGGTGCGGCCACT...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTCTCTTTGGCCTGCTTCCTCTaGCTCCTTCTTGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLPHHGPRHSPGPCLGFSLACFL*LLLDLL
Trigger: CAGAAGATCAAGAAGGAGCCAGAGGAAGCAGGCCAA...AGAGAAGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp CAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGCCGTTTCTTGGCCTGCTTCCTCTaGCTCCTTCTTGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: QTRQRHIGPVPQQDLSRFLACFL*LLLDLL
Trigger: CAGAAGATCAAGAAGGAGCCAGAGGAAGCAGGCCAA...GAAACGGCTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCGTAAGAGGGTATCTGTaGGACAGCAAGCATGGGGAG +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLAVRGYL*DSKHGE
Trigger: CTCCCCATGCTTGCTGTCCCACAGATACCCTCTTAC...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTACTTTGGGACTGCAGATaGGAGTGCAAGCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLLWDCR*ECKRRI
Trigger: TATCCGGCGCTTGCACTCCCATCTGCAGTCCCAAAG...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCTCCATGGCAGCCTGCTaGACTTTGACCTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPSMAAC*TLTCSR
Trigger: ACGAGAGCAGGTCAAAGTCCAGCAGGCTGCCATGGA...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACAACAGAACATTGAATaGCATCAGCTCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GEKAQSLAYHERGKLPAIQQNIE*HQLQLH
Trigger: ATGGAGCTGGAGCTGATGCCATTCAATGTTCTGTTG...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGCAACAGAACATTGAATaGCATCAGCTCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQQQNIE*HQLQLH
Trigger: ATGGAGCTGGAGCTGATGCCATTCAATGTTCTGTTG...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCAAAAGTCTTCCAATTTaGGTGACTCGGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLKSLPI*VTRAGE
Trigger: CTCACCTGCCCGAGTCACCCAAATTGGAAGACTTTT...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGGTTTTCCAAAGCCGTTaGTCATGCCGTCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWVFQSR*SCRLPR
Trigger: CCTGGGAAGACGGCATGACCAACGGCTTTGGAAAAC...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339717.11
ENST00000449261.6
CDS-3UTR CCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGGAAGTGACGAAGGAGTaGGGCCCCCGGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGEVTKE*GPRTLL
Trigger: GAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACTTC...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ATGCCATTGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGAAGTGACGAAGGAGTaGGGCCCCCGGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: MPLSLSKRCKGSFPSCSGEVTKE*GPRTLL
Trigger: GAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACTTC...ACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGGAGAACCATGCGATTaGTCAAAACTGGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTGEPCD*SKLGPC
Trigger: GCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCC...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTATCCCCTGAGGGACCTTaGGTGGGAGTTTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLSPEGP*VGVFGT
Trigger: TGTGCCAAAAACTCCCACCCAAGGTCCCTCAGGGGA...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: FQHLELVHGVFHTQGQDFGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...AAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGTATCCACGGCATCTCTaGGATCAGTGTCGGAACCTC +
Preference number: 4 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWYPRHL*DQCRNL
Trigger: GAGGTTCCGACACTGATCCCAGAGATGCCGTGGATA...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAATTCCCCCTGGGACCCTaGCGTATCCACGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: ALIQGAHLQSWEVVSTAKFPLGP*RIHGIS
Trigger: AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAA...TTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GGGGCCATGAGGGATAGTCTGTTGATGCCATTGTCACTGAGCAAGCGTTGCAAATGGGGAGATTCCCCCTaGGACCCTGGCGTATCCACG +
Preference number: 4 (lower is better)
Translates to: GAMRDSLLMPLSLSKRCKWGDSP*DPGVST
Trigger: CGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA...TTTGCAACGCTTGCTCAGTGACAATGGCATCAACAGACTATCCCTCATGGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp GTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGAGGGCACACTTGCAGAGCTaGGAAGTTGTGTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: VSTAKGKVCGWEVVSWGRAHLQS*EVVSTA
Trigger: AGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGC...CCTCCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTGCACACTTGCAGAGCTaGGAAGTTGTGTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASAHLQS*EVVSTA
Trigger: AGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGC...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCCAGGAAGATGTTTGGTaGCAGGCGCCATGCCATCCA +
Preference number: 4 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPQEDVW*QAPCHP
Trigger: TGGATGGCATGGCGCCTGCCACCAAACATCTTCCTG...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGCAGGAAGATGTTTGGTaGCAGGCGCCATGCCATCCA +
Preference number: 4 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWQEDVW*QAPCHP
Trigger: TGGATGGCATGGCGCCTGCCACCAAACATCTTCCTG...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGTCAGCGGCCTGCAACTaGCCCTGCGACTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKSAACN*PCDFGA
Trigger: AGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGA...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGTGTGTGGCCACACAATaGAGGACTCCAGTAATGGAA +
Preference number: 4 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRCVATQ*RTPVME
Trigger: TTCCATTACTGGAGTCCTCCATTGTGTGGCCACACA...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTATCAACGACACTGTGTaGCCACACAATGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCINDTV*PHNGGL
Trigger: GAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGAT...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAATCAACGACACTGTGTaGCCACACAATGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSINDTV*PHNGGL
Trigger: GAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGAT...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCACCCACACCACTAAGTaGGGTACCGGCCGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFTHTTK*GTGRGV
Trigger: GACACCCCGGCCGGTACCCCACTTAGTGGTGTGGGT...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAGGCCGCTTCCGGGAGTaGCGCTCTTCCTCGATGCTG +
Preference number: 4 (lower is better)
Translates to: IWERESKTGQWVQKMGPRGRFRE*RSSSML
Trigger: CAGCATCGAGGAAGAGCGCCACTCCCGGAAGCGGCC...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGGTTTTCCAAAGCCGTTaGTCATGCCTGTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVVFQSR*SCLSLP
Trigger: AGGAAGAGACAGGCATGACCAACGGCTTTGGAAAAC...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000534400.5
3UTR CAA 72 bp AACAAGAGGGGACCCGCCTTGATCCAGGGGGCACACTaGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGGG +
Preference number: 4 (lower is better)
Translates to: NKRGPALIQGAH*QSWEVVSTAKG
Trigger: CCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTGGGTGGGTGAGCACTTaGGACTGTAGGGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVGWVST*DCRGTG
Trigger: CCCCGTCCCCCTACAGTCTCAAGTGCTCACCCACCC...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp ACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGTGGGTCATAGATGCTaGTACGATGCAGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: TQLTSTAPHKPPSTSMWTVGHRC*YDAGVH
Trigger: ATGGACGCCTGCATCGTATCAGCATCTATGACCCAC...TGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCTACTATTGCATTCGGTaGTATCCTGGGCAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCYYCIR*YPGQLA
Trigger: AGCTAACTGCCCAGGATATCACCGAATGCAATAGTA...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGGACTTGCCAGGGAACTaGGGCTGTTCACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWDLPGN*GCSLFS
Trigger: GGAAAACAGTGAACAGCCTCAGTTCCCTGGCAAGTC...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATTGGGCTCAATCTTCATaGAGAGCCCAGCCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDWAQSS*RAQPAV
Trigger: CACAGCGGGCTGGGCTCTTCATGAAGATTGAGCCCA...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTCTCTTCCTCAACAGAACATTaGATGGCATCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLPHHGPRHSPGPCLGFSSSTEH*MASAPA
Trigger: AGCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGA...AGAGAAGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCCAGGAGGCTTCTGCCTaGGCCATTGTAGTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLQEASA*AIVVRV
Trigger: GACTCTGACTACAATGGCTCAGGCAGAAGCCTCCTG...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339717.11
ENST00000357641.10
CDS-3UTR TCA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAGTCCCTGGCCTACCATaGGAGGGGGAAGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGVPGLP*EGEAAG
Trigger: GCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGAC...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTAAAAGACCAGTGTGGTaGCGGTTTCTGTCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISKRPVW*RFLSVW
Trigger: CCAAACTGACAGAAACCGTCACCACACTGGTCTTTT...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGCCAGGTGGTGGAGAGTaGAGCTTAAGACTGCAATTG +
Preference number: 4 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWPGGGE*SLRLQL
Trigger: CAATTGCAGTCTTAAGCTTCACTCTCCACCACCTGG...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAGGAGGCAGAGGGTTTaGAATAAAAGTAATGCATTC +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQRRQRV*NKSNAF
Trigger: GAATGCATTACTTTTATTTCAAACCCTCTGCCTCCT...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCCCTCCCGGTTCTCTGGGATaGGGATGTTGTCCACGTCTT +
Preference number: 4 (lower is better)
Translates to: HLELVHGVFHTQGQDFVPPGSLG*GCCPRL
Trigger: AAGACGTGGACAACATCCTCATCCCAGAGAACCGGG...AGGGACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGAAACCTCACTCAAGTTaGCTGGTTCTGCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVKPHSS*LVLRRC
Trigger: ACATCTTCGCAGAACCAGTCAACTTGAGTGAGGTTT...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp TTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTTTGGGATCGATGATCTaGGCCATTGTAGTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LGRFPLGPWRIHGISGISLGSMI*AIVVRV
Trigger: GACTCTGACTACAATGGCTCAGATCATCGATCCCAA...ACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534400.5
CDS-3UTR GCA 90 bp AGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTAGGGTTTCTTGGACTTaGCAGGGAACTGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RSQSPQLTNYLGRGEALARVSWT*QGTEAV
Trigger: AACAGCCTCAGTTCCCTGGCAAGTCCAAGAAACCCT...AGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCGTGCTTCTGGCTGGATaGCTGAGTCCACCATACGGA +
Preference number: 4 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVVLLAG*LSPPYG
Trigger: TCCGTATGGTGGACTCAGGCATCCAGCCAGAAGCAC...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCAGACACCAAACTGTaGCCATCTACTCGCCGTTTT +
Preference number: 4 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTADTKL*PSTRRF
Trigger: AAAACGGCGAGTAGATGGGCACAGTTTGGTGTCTGC...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCGCAGACACCAAACTGTaGCCATCTACTCGCCGTTTT +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLAADTKL*PSTRRF
Trigger: AAAACGGCGAGTAGATGGGCACAGTTTGGTGTCTGC...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCCCTTATTGGGGCAAAGGATaGAATCCACAGGCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: HLELVHGVFHTQGQDFVPYWGKG*NPQAGR
Trigger: CCTCCCGGCCTGTGGATTGCATCCTTTGCCCCAATA...AGGGACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp AGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGACCACATGGGCCCAGTaGCCATCACTGGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: STAPHKPPSTSMWTDGHSTTWAQ*PSLVCL
Trigger: CAAACAGACCAGTGATGGGCACTGGGCCCATGTGGT...CGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATGACTGCAGATGGGAGTaGAAGCGCCGGATAAGAGGG +
Preference number: 4 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDDCRWE*KRRIRG
Trigger: CCCTCTTATCCGGCGCTTGCACTCCCATCTGCAGTC...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCGCGTTTCTTTGGGACTaGAGATGGGAGTGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVAFLWD*RWECKR
Trigger: GCGCTTGCACTCCCATCTGCAGTCCCAAAGAAACGC...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTCTTGTCTTCTCATCCTaGTCTCGCTGCTCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: IHGISGISVGTSPALRCSLVFSS*SRCSAF
Trigger: AAACGCTGAGCAGCGAGAGCAGGATGAGAAGACAAG...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACACTTGTCTTCTCATCCTaGTCTCGCTGCTCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTLVFSS*SRCSAF
Trigger: AAACGCTGAGCAGCGAGAGCAGGATGAGAAGACAAG...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGCAGCTCCTCCTTCACTaGACTTGTCTTCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: PARRTMRLVKTGALPLVGQLLLH*TCLLIL
Trigger: CAGGATGAGAAGACAAGTGCAGTGAAGGAGGAGCTG...CCCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTCAGCTCCTCCTTCACTaGACTTGTCTTCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: IHGISGISVGTSPALRCSQLLLH*TCLLIL
Trigger: CAGGATGAGAAGACAAGTGCAGTGAAGGAGGAGCTG...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGTCATGCCGGAGCTTCTaGCAATACTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWSCRSF*QYFSSS
Trigger: GGAGGAGCTGAAGTATTGGCAGAAGCTCCGGCATGA...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGAGGTGCTGGACTTTGACCTaGTCTCGTTTGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VSTAKGKVCGWEVVSWGRCWTLT*SRLSFS
Trigger: AGAGAAGCTCAAACGAGAGCAGGTCAAAGTCCAGCA...CCTCCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCAAGTTGACTGGTTCTaGGAAGATGTGTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASQVDWF*EDVCRI
Trigger: GATCCTGCACACATCTTCGCAGAACCAGTCAACTTG...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTACTGCAAGCTTCAAATaGCAGTCCACCACTGAGACC +
Preference number: 4 (lower is better)
Translates to: IHGISGISVGTSPALRCSTASFK*QSTTET
Trigger: GGTCTCAGTGGTGGACTGGCATTTGAAGCTTGCAGT...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
CDS-3UTR GCA 90 bp GTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGACTGCAAGCTTCAAATaGCAGTCCACCACTGAGACC +
Preference number: 4 (lower is better)
Translates to: VVSTAKGKVCGWEVVSWGTASFK*QSTTET
Trigger: GGTCTCAGTGGTGGACTGGCATTTGAAGCTTGCAGT...CCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
CDS-3UTR GCA 90 bp GTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGGAAGCCACTGCCAGGTaGGCTTGTTGTCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: VVSTAKGKVCGWEVVSWGEATAR*ACCQRR
Trigger: TCTTCTTTGACAACAAGCGCACCTGGCAGTGGCTTC...CCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCTCCCTTGGAAGCCACTaGCAGGTGCGCTTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLSLGSH*QVRLLS
Trigger: TGACAACAAGCGCACCTGGCAGTGGCTTCCAAGGGA...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACACTGCCAGGAGAACCATaGGATTGGTCAAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: TQLTSTAPHKPPSTSMWTLPGEP*DWSKLG
Trigger: CCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAG...TGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGCTGCCAGGAGAACCATaGGATTGGTCAAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWLPGEP*DWSKLG
Trigger: CCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAG...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTAAGACTGGGCAATGGGTaGAGAAGATGGGACCGAGAA +
Preference number: 4 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLRLGNG*RRWDRE
Trigger: TTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCT...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGGGCTGTGCCAGCTTCTaGCGAAGGGCATTGATCTCC +
Preference number: 4 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKRGCASF*RRALIS
Trigger: GGAGATCAATGCCCTTCGGCAGAAGCTGGCACAGCC...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp AACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGAGAACATGGTGGTGGTGGCTGTaGCAGCTTCTGCCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: NWPCDFGAQEVKRNVQRTWWWWL*QLLPKG
Trigger: GCCCTTCGGCAGAAGCTGGCACAGCCACCACCACCA...TGTTCTCTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR GCA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGACTGCTCCAGCACAGCTaGATCCCCCTGGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGLLQHS*IPLGPC
Trigger: GCAGGGCCCCAGGGGGATGCAGCTGTGCTGGAGCAG...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR GCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGTCTTCTGGCTCCTCCTaGAAGGCCTGCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKSSGSS*KACSST
Trigger: TGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGA...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp ATGCCATTGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTCTCAGACAAGGAAGGTaGAGGCCCAGTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: MPLSLSKRCKGSFPSCSGLRQGR*RPSGLQ
Trigger: CTGGAGCCCACTGGGCCTGCACCTTCCTTGTCTGAG...ACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTGGGCTTTAGGAACCTaGTTGGAGGTTTGCTATCAT +
Preference number: 4 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVWALGT*LEVCYH
Trigger: ATGATAGCAAACCTCCAAGCAGGTTCCTAAAGCCCA...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp AGGAGAGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTGGGCTTTAGGAACCTaGTTGGAGGTTTGCTATCAT +
Preference number: 4 (lower is better)
Translates to: RRACHTMVLAILQDPVWAWALGT*LEVCYH
Trigger: ATGATAGCAAACCTCCAAGCAGGTTCCTAAAGCCCA...AGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCTGGGCTTTAGGAACCTaGTTGGAGGTTTGCTATCAT +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCWALGT*LEVCYH
Trigger: ATGATAGCAAACCTCCAAGCAGGTTCCTAAAGCCCA...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACATCACTGAGCAAGCGTTaGAAAGGCTCATTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTSLSKR*KGSFPS
Trigger: GCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGA...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGCTTCCTCATGGCACCTaGGAACTGAGGGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGLPHGT*ELRGQA
Trigger: GGCCTGTCCCCTCAGTTCCCAGGTGCCATGAGGAAG...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGACCTCGACAATCCGCTaGGCCTGGGCATATGTCAGG +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKTSTIR*AWAYVR
Trigger: CCTGACATATGCCCAGGCCCAGCGGATTGTCGAGGT...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCCATTCGGTGATATCCTaGGCAGTTAGCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCHSVIS*AVSSSS
Trigger: TGAAGATGAGCTAACTGCCCAGGATATCACCGAATG...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCATACCAGATGCATGCTTaGAGCAGGATTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: AQSLAYHERGKLPAIHLAYQMHA*SRIPSF
Trigger: AAAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTA...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATGGGGGTGCTTCTGGCTaGATGCCTGAGTCCACCATA +
Preference number: 4 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDGGASG*MPESTI
Trigger: TATGGTGGACTCAGGCATCCAGCCAGAAGCACCCCC...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATTCGATGAGTGACTGTTaGGCCCCACTGCTGCGACTC +
Preference number: 4 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDSMSDC*APLLRL
Trigger: GAGTCGCAGCAGTGGGGCCCAACAGTCACTCATCGA...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGAGGCGCCACCCTTATTaGGGCAAAGGATGCAATCCA +
Preference number: 4 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWRRHPY*GKGCNP
Trigger: TGGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCT...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGTGGCCGCACCTGGTaGCGAGTGGGCCTCACAGTA +
Preference number: 4 (lower is better)
Translates to: LSKRCKGSFPSCSGDFSKSGRTW*RVGLTV
Trigger: TACTGTGAGGCCCACTCGCCACCAGGTGCGGCCACT...CTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGTTGGCCTGCTTCCTCTaGCTCCTTCTTGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWLACFL*LLLDLL
Trigger: CAGAAGATCAAGAAGGAGCCAGAGGAAGCAGGCCAA...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTGAATTCCAGGTAATCTaGAACCTCACTCAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGEFQVI*NLTQVD
Trigger: GTCAACTTGAGTGAGGTTCCAGATTACCTGGAATTC...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGAAGGTGCGGTACAGGTaGGACTCCAGCTTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLKVRYR*DSSFRL
Trigger: GAGGCGGAAGCTGGAGTCCCACCTGTACCGCACCTT...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTCTCTCGGACAGCTGCTCGGTaGAAAATTGTGTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: SLPHHGPRHSPGPCLGFSRTAAR*KIVSLA
Trigger: TGCTAAAGACACAATTTTCCACCGAGCAGCTGTCCG...AGAGAAGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGCGGACAGCTGCTCGGTaGAAAATTGTGTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLRTAAR*KIVSLA
Trigger: TGCTAAAGACACAATTTTCCACCGAGCAGCTGTCCG...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTAAAAGTCTTCCAATTTaGGTGACTCGGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASKSLPI*VTRAGE
Trigger: CTCACCTGCCCGAGTCACCCAAATTGGAAGACTTTT...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAATGCCGGCCATACATCTaGCAGGGGCAGAAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: ALIQGAHLQSWEVVSTAKCRPYI*QGQKRL
Trigger: AAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCA...TTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGTGCCGGCCATACATCTaGCAGGGGCAGAAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKCRPYI*QGQKRL
Trigger: AAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCA...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AAATCAACATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 4 (lower is better)
Translates to: KSTWQSAACNWPCDFGAQAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...CTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCATGTTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAATCAACATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGAGCAAGACTGGGCAATaGGTGCAGAAGATGGGACCG +
Preference number: 4 (lower is better)
Translates to: KSTWQSAACNWPCDFGAQSKTGQ*VQKMGP
Trigger: CGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCT...CTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCATGTTGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCAGCAAGACTGGGCAATaGGTGCAGAAGATGGGACCG +
Preference number: 4 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVSKTGQ*VQKMGP
Trigger: CGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCT...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp AGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTGCACACTTGCAGAGCTaGGAAGTTGTGTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: RSQSPQLTNYLGRGEALAAHLQS*EVVSTA
Trigger: AGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGC...AGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGACCCACCCTGAAGGCTTaGACCACCTCGTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRPTLKA*TTSWQQ
Trigger: TTGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGG...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGCCCTCGACATCCATGTaGACAGATGGACACTCGCAC +
Preference number: 4 (lower is better)
Translates to: ACNWPCDFGAQEVKRNVQPSTSM*TDGHSH
Trigger: GTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGG...CTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTATGCCATCCAGGTGGTaGAGAGTGAAGCTTAAGACT +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCMPSRW*RVKLKT
Trigger: AGTCTTAAGCTTCACTCTCCACCACCTGGATGGCAT...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGCCATGCCATCCAGGTaGTGGAGAGTGAAGCTTAAG +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLAMPSR*WRVKLK
Trigger: CTTAAGCTTCACTCTCCACCACCTGGATGGCATGGC...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCTGCATTCCCTGGAGTTaGGAAGTGGGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPCIPWS*EVGVAE
Trigger: CTCTGCTACTCCCACTTCCCAACTCCAGGGAATGCA...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCATGTGTGGCCACACAATaGAGGACTCCAGTAATGGAA +
Preference number: 4 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSCVATQ*RTPVME
Trigger: TTCCATTACTGGAGTCCTCCATTGTGTGGCCACACA...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTTGTGTGGCCACACAATaGAGGACTCCAGTAATGGAA +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCCVATQ*RTPVME
Trigger: TTCCATTACTGGAGTCCTCCATTGTGTGGCCACACA...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTCACAGCAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGATCAACGACACTGTGTaGCCACACAATGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: FTADATETHRPRATAGSEINDTV*PHNGGL
Trigger: GAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGAT...CTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTGCTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAAGAGAAAGTGTTaGGGGGAAGAGATAGACATA +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQKKRKC*GEEIDI
Trigger: TATGTCTATCTCTTCCCCCCAACACTTTCTCTTCTT...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTGGCTGTGGTGGTGGTaGCTGTGCCAGCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWEWLWWW*LCQLLP
Trigger: CGGCAGAAGCTGGCACAGCCACCACCACCACAGCCA...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAACCCACACCACTAAGTaGGGTACCGGCCGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: IWERESKTGQWVQKMGPRTHTTK*GTGRGV
Trigger: GACACCCCGGCCGGTACCCCACTTAGTGGTGTGGGT...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp AAGAGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGGTTTTCCAAAGCCGTTaGTCATGCCTGTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KRGPALIQGAHLQSWEVVVFQSR*SCLSLP
Trigger: AGGAAGAGACAGGCATGACCAACGGCTTTGGAAAAC...CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
3UTR CAA 72 bp ACCCTGTCTGGGCTTCTCTGTAGCTTAACCCCATTCTaGGCCTTCTTGAAGAGGACTGATGTGCGGCGACCC +
Preference number: 4 (lower is better)
Translates to: TLSGLLCSLTPF*AFLKRTDVRRP
Trigger: GGGTCGCCGCACATCAGTCCTCTTCAAGAAGGCCAAGAATGGGGTTAAGCTACAGAGAAGCCCAGACAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp GCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGGTGGGTCATAGATGCTaGTACGATGCAGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: ACNWPCDFGAQEVKRNVQVGHRC*YDAGVH
Trigger: ATGGACGCCTGCATCGTATCAGCATCTATGACCCAC...CTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGTGGGTCATAGATGCTaGTACGATGCAGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLVGHRC*YDAGVH
Trigger: ATGGACGCCTGCATCGTATCAGCATCTATGACCCAC...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AAATCAACATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGACTTGCCAGGGAACTaGGGCTGTTCACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: KSTWQSAACNWPCDFGAQDLPGN*GCSLFS
Trigger: GGAAAACAGTGAACAGCCTCAGTTCCCTGGCAAGTC...CTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCATGTTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCATCACTGGTCTGTTTaGAGGCGCCACCCTTATTGG +
Preference number: 4 (lower is better)
Translates to: STAPHKPPSTSMWTDGHSHHWSV*RRHPYW
Trigger: CCAATAAGGGTGGCGCCTTCAAACAGACCAGTGATG...CGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGATGGGCTCAATCTTCATaGAGAGCCCAGCCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRWAQSS*RAQPAV
Trigger: CACAGCGGGCTGGGCTCTTCATGAAGATTGAGCCCA...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAATGCCAGTCCACCACTaGGACCCAAACTACATTCAG +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLMPVHH*DPNYIQ
Trigger: CTGAATGTAGTTTGGGTCTCAGTGGTGGACTGGCAT...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534400.5
CDS-3UTR TCA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAAAAAGACCAGTGTGGTaGCGGTTTCTGTCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTKRPVW*RFLSVW
Trigger: CCAAACTGACAGAAACCGTCACCACACTGGTCTTTT...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCAAAAGACCAGTGTGGTaGCGGTTTCTGTCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLAKRPVW*RFLSVW
Trigger: CCAAACTGACAGAAACCGTCACCACACTGGTCTTTT...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAATGGCCTCAAGGGGAATaGGACATTAAAGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: LAYHERGKLPAIHLAGAEWPQGE*DIKEKD
Trigger: GTCTTTTTCTTTAATGTCTCATTCCCCTTGAGGCCA...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGCCTCTGTCTGGGCCTaGGGAGCCTGGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVASVWA*GAWQRH
Trigger: GTGTCTCTGCCAGGCTCCTCAGGCCCAGACAGAGGC...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGCCTCTGTCTGGGCCTaGGGAGCCTGGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLASVWA*GAWQRH
Trigger: GTGTCTCTGCCAGGCTCCTCAGGCCCAGACAGAGGC...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGAGAGGGGACCCGCCTTaGTCCAGGGGGCACACTTGC +
Preference number: 4 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWRGDPP*SRGHTC
Trigger: GCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCT...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAGATAGGAGCCCACCCTaGAGGCTTGGACCACCTCGT +
Preference number: 4 (lower is better)
Translates to: IWERESKTGQWVQKMGPRDRSPP*RLGPPR
Trigger: ACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATC...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGAGGAGGCAGAGGGTTTaGAATAAAAGTAATGCATTC +
Preference number: 4 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSRRQRV*NKSNAF
Trigger: GAATGCATTACTTTTATTTCAAACCCTCTGCCTCCT...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGCACAGAGTCCACAGCTaGCCAACTACCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGHRVHS*PTTWGE
Trigger: CTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTG...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCCACAGAGTCCACAGCTaGCCAACTACCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFHRVHS*PTTWGE
Trigger: CTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTG...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAAGGGTTTCTTGGACTTaGCAGGGAACTGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SRPARRTMRLVKTGALPLRVSWT*QGTEAV
Trigger: AACAGCCTCAGTTCCCTGGCAAGTCCAAGAAACCCT...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp TTCACAGCAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGGAAGTACCAGATGCATaGTTGGAGCAGGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: FTADATETHRPRATAGSEEVPDA*LEQDSF
Trigger: GAAGGAATCCTGCTCCAAGCATGCATCTGGTACTTC...CTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTGCTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR GCA 90 bp GGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGAAGTACCAGATGCATaGTTGGAGCAGGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: GPALIQGAHLQSWEVVSTEVPDA*LEQDSF
Trigger: GAAGGAATCCTGCTCCAAGCATGCATCTGGTACTTC...TGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATGTGCTTCTGGCTGGATaGCTGAGTCCACCATACGGA +
Preference number: 4 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDVLLAG*LSPPYG
Trigger: TCCGTATGGTGGACTCAGGCATCCAGCCAGAAGCAC...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGCTAGCCCTTTCTGCTTaGAGATATAGCAGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVLALSA*RYSRLV
Trigger: AACTAACCTGCTATATCTGCAAGCAGAAAGGGCTAG...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGGGGTGTGTCTTGGCCTaGTTCCTCTGGCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKRGCVLA*FLWLLL
Trigger: AAGAAGGAGCCAGAGGAAGCAGGCCAAGACACACCC...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTTGCTGGACTTTGACCTaGTCTCGTTTGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: IHGISGISVGTSPALRCSCWTLT*SRLSFS
Trigger: AGAGAAGCTCAAACGAGAGCAGGTCAAAGTCCAGCA...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGTGCTGGACTTTGACCTaGTCTCGTTTGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PARRTMRLVKTGALPLVGCWTLT*SRLSFS
Trigger: AGAGAAGCTCAAACGAGAGCAGGTCAAAGTCCAGCA...CCCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTCTGCGAAGATGTGTaGAGGATCCTTCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTFCEDV*RILLLQ
Trigger: CTGCAGGAGAAGGATCCTGCACACATCTTCGCAGAA...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGCAAGTTGACTGGTTCTaGGAAGATGTGTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: PARRTMRLVKTGALPLVGQVDWF*EDVCRI
Trigger: GATCCTGCACACATCTTCGCAGAACCAGTCAACTTG...CCCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGGGGGCGTCAGACCACTaGAAGCTTCAAATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKRGASDH*KLQMPV
Trigger: GACTGGCATTTGAAGCTTGCAGTGGTCTGACGCCCC...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
CDS-3UTR GCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGGCCTCTGCCTGTTTCTaGTCTCCCAGCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLASACF*SPSFST
Trigger: CGTGCTGAAGCTGGGAGAGCAGAAACAGGCAGAGGC...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCAAACTACATTCAGAGTCAGACCCGCTTTCGGTGTGTTTTCCAAAGCCGTTGGAAGAGGCTTCTCTGTaGCCTGCGGGATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PKLHSESDPLSVCFPKPLEEASL*PAGWRQ
Trigger: CTGCCTCCATCCCGCAGGGCACAGAGAAGCCTCTTC...CAACGGCTTTGGAAAACACACCGAAAGCGGGTCTGACTCTGAATGTAGTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441123.1
CDS-3UTR GCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGAGCAGCTCCTTCAGCTaGACCTCTGGGGACAAATGG +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKSSSFS*TSGDKW
Trigger: CCATTTGTCCCCAGAGGTGCAGCTGAAGGAGCTGCT...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGACCTCGACAATCCGCTaGGCCTGGGCATATGTCAGG +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLTSTIR*AWAYVR
Trigger: CCTGACATATGCCCAGGCCCAGCGGATTGTCGAGGT...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGACCTCGACAATCCGCTaGGCCTGGGCATATGTCAGG +
Preference number: 4 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGTSTIR*AWAYVR
Trigger: CCTGACATATGCCCAGGCCCAGCGGATTGTCGAGGT...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCACATTCGGTGATATCCTaGGCAGTTAGCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSHSVIS*AVSSSS
Trigger: TGAAGATGAGCTAACTGCCCAGGATATCACCGAATG...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAGAGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGCATTCGGTGATATCCTaGGCAGTTAGCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: KRGPALIQGAHLQSWEVVHSVIS*AVSSSS
Trigger: TGAAGATGAGCTAACTGCCCAGGATATCACCGAATG...CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGTGGATGAGGGTTTCTTaGACTTGCCAGGGAACTGAG +
Preference number: 4 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWWMRVS*TCQGTE
Trigger: CTCAGTTCCCTGGCAAGTCCAAGAAACCCTCATCCA...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCTACCAGATGCATGCTTaGAGCAGGATTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCYQMHA*SRIPSF
Trigger: AAAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTA...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTACCAGATGCATGCTTaGAGCAGGATTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVYQMHA*SRIPSF
Trigger: AAAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTA...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCGGGGGTGCTTCTGGCTaGATGCCTGAGTCCACCATA +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFGGASG*MPESTI
Trigger: TATGGTGGACTCAGGCATCCAGCCAGAAGCACCCCC...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCCAAGCATGGGGAGAGTaGAGGGTGTGTCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFQAWGE*RVCLGL
Trigger: CAGGCCAAGACACACCCTCCACTCTCCCCATGCTTG...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGCAACAGAACATTGAATaGCATCAGCTCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLQQNIE*HQLQLH
Trigger: ATGGAGCTGGAGCTGATGCCATTCAATGTTCTGTTG...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTCTCACTCAAGTTGACTaGTTCTGCGAAGATGTGTGC +
Preference number: 4 (lower is better)
Translates to: IHGISGISVGTSPALRCSLTQVD*FCEDVC
Trigger: GCACACATCTTCGCAGAACCAGTCAACTTGAGTGAG...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTCACTCAAGTTGACTaGTTCTGCGAAGATGTGTGC +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLALTQVD*FCEDVC
Trigger: GCACACATCTTCGCAGAACCAGTCAACTTGAGTGAG...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGCGGACAGCTGCTCGGTaGAAAATTGTGTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWRTAAR*KIVSLA
Trigger: TGCTAAAGACACAATTTTCCACCGAGCAGCTGTCCG...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGCGGACAGCTGCTCGGTaGAAAATTGTGTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWRTAAR*KIVSLA
Trigger: TGCTAAAGACACAATTTTCCACCGAGCAGCTGTCCG...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGATCCCACGGCTGCGTTTaGGGGGCGTCAGACCACTGC +
Preference number: 4 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGSHGCV*GASDHC
Trigger: GCAGTGGTCTGACGCCCCCCAAACGCAGCCGTGGGA...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
CDS-3UTR CCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRRKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAATCCCCTGAGGGACCTTaGGTGGGAGTTTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: ALIQGAHLQSWEVVSTAKSPEGP*VGVFGT
Trigger: TGTGCCAAAAACTCCCACCCAAGGTCCCTCAGGGGA...TTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGTCCCCTGAGGGACCTTaGGTGGGAGTTTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKSPEGP*VGVFGT
Trigger: TGTGCCAAAAACTCCCACCCAAGGTCCCTCAGGGGA...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCAAACTACATTCAGAGTCAGACCCGCTTTCGGTGTGTTTTCCAAAGCCGTTGGGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: PNYIQSQTRFRCVFQSRWGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...CCAACGGCTTTGGAAAACACACCGAAAGCGGGTCTGACTCTGAATGTAGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441123.1
CDS-3UTR CCA 90 bp GCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAACCCTCGACATCCATGTaGACAGATGGACACTCGCAC +
Preference number: 4 (lower is better)
Translates to: ALIQGAHLQSWEVVSTAKPSTSM*TDGHSH
Trigger: GTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGG...TTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCATGCCATCCAGGTGGTaGAGAGTGAAGCTTAAGACT +
Preference number: 4 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGMPSRW*RVKLKT
Trigger: AGTCTTAAGCTTCACTCTCCACCACCTGGATGGCAT...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACCTGCACTGACTTGCGGAATGCCATCCAGGTGGTaGAGAGTGAAGCTTAAGACT +
Preference number: 4 (lower is better)
Translates to: LCSGGSSHGHRPPALTCGMPSRW*RVKLKT
Trigger: AGTCTTAAGCTTCACTCTCCACCACCTGGATGGCAT...TCCGCAAGTCAGTGCAGGTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR CCA 90 bp CATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCCCTTGCATTCCCTGGAGTTaGGAAGTGGGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: HLELVHGVFHTQGQDFVPCIPWS*EVGVAE
Trigger: CTCTGCTACTCCCACTTCCCAACTCCAGGGAATGCA...AGGGACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR CCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCTGTGTGGCCACACAATaGAGGACTCCAGTAATGGAA +
Preference number: 4 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGCVATQ*RTPVME
Trigger: TTCCATTACTGGAGTCCTCCATTGTGTGGCCACACA...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGACCTCTGGGGACAAATaGGCCCGGTTCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGTSGDK*ARFSGM
Trigger: CATCCCAGAGAACCGGGCCCATTTGTCCCCAGAGGT...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR CCA 90 bp ATGCCATTGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTACCTCTGGGGACAAATaGGCCCGGTTCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: MPLSLSKRCKGSFPSCSGTSGDK*ARFSGM
Trigger: CATCCCAGAGAACCGGGCCCATTTGTCCCCAGAGGT...ACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCTACTATTGCATTCGGTaGTATCCTGGGCAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGYYCIR*YPGQLA
Trigger: AGCTAACTGCCCAGGATATCACCGAATGCAATAGTA...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGTACTATTGCATTCGGTaGTATCCTGGGCAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGYYCIR*YPGQLA
Trigger: AGCTAACTGCCCAGGATATCACCGAATGCAATAGTA...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCTTTTTGCCCTTGGATaGGGGTTTCTTGGACTTGCC +
Preference number: 4 (lower is better)
Translates to: STAPHKPPSTSMWTDGHSLFALG*GFLGLA
Trigger: GGCAAGTCCAAGAAACCCTCATCCAAGGGCAAAAAG...CGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCAAGCGTCTTCATCGATaGGTGACTGTTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFKRLHR*VTVGPH
Trigger: GTGGGGCCCAACAGTCACTCATCGATGAAGACGCTT...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCATAACATTGCTATTGTaGCATTCATCATCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCITLLL*HSSSRH
Trigger: GTGCCTGGATGATGAATGTCACAATAGCAATGTTAT...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp TTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGCATCACTGGTCTGTTTaGAGGCGCCACCCTTATTGG +
Preference number: 4 (lower is better)
Translates to: LQSWEVVSTAKGKVCGWEHHWSV*RRHPYW
Trigger: CCAATAAGGGTGGCGCCTTCAAACAGACCAGTGATG...CTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAACTGGTTTTTCCTCTaGAAGGAGAGACCACTACAG +
Preference number: 4 (lower is better)
Translates to: MAISGLQLALRLWCSGGENWFFL*KERPLQ
Trigger: CTGTAGTGGTCTCTCCTTTCAGAGGAAAAACCAGTT...TTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGAACTGGTTTTTCCTCTaGAAGGAGAGACCACTACAG +
Preference number: 4 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWNWFFL*KERPLQ
Trigger: CTGTAGTGGTCTCTCCTTTCAGAGGAAAAACCAGTT...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTGAACCTCACTCAAGTTaGCTGGTTCTGCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTEPHSS*LVLRRC
Trigger: ACATCTTCGCAGAACCAGTCAACTTGAGTGAGGTTC...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449261.6
ENST00000534400.5
CDS-3UTR TCA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGACAGGTAGCTGGAAGTaGCGAAGGAGTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVTGSWK*RRSGAP
Trigger: GGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGT...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGGGTCCCTGGCCTACCATaGGAGGGGGAAGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RVKLKTAIAEKVHEERRRVPGLP*EGEAAG
Trigger: GCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGAC...CCTTCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGGTCCCTGGCCTACCATaGGAGGGGGAAGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEVPGLP*EGEAAG
Trigger: GCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGAC...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTAAAAAGACCAGTGTGGTaGCGGTTTCTGTCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLKRPVW*RFLSVW
Trigger: CCAAACTGACAGAAACCGTCACCACACTGGTCTTTT...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp TTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTTGGCCTCAAGGGGAATaGGACATTAAAGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: LGRFPLGPWRIHGISGISWPQGE*DIKEKD
Trigger: GTCTTTTTCTTTAATGTCTCATTCCCCTTGAGGCCA...ACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCATGGCCTCAAGGGGAATaGGACATTAAAGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSWPQGE*DIKEKD
Trigger: GTCTTTTTCTTTAATGTCTCATTCCCCTTGAGGCCA...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTTGGCCTCAAGGGGAATaGGACATTAAAGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: RIHGISGISVGTSPALRCWPQGE*DIKEKD
Trigger: GTCTTTTTCTTTAATGTCTCATTCCCCTTGAGGCCA...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCGCAGACACCAAACTGTaGCCATCTACTCGCCGTTTT +
Preference number: 4 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVADTKL*PSTRRF
Trigger: AAAACGGCGAGTAGATGGGCACAGTTTGGTGTCTGC...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGACTGTTGGGCCCCACTaGTGCGACTCTCCAAGTATG +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLTVGPH*CDSPSM
Trigger: CATACTTGGAGAGTCGCAGCAGTGGGGCCCAACAGT...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGACCACATGGGCCCAGTaGCCATCACTGGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGTTWAQ*PSLVCL
Trigger: CAAACAGACCAGTGATGGGCACTGGGCCCATGTGGT...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCATCCTTCTTGATCTTCTaGTTCAAACTCATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: AQSLAYHERGKLPAIHLASFLIF*FKLILL
Trigger: AAGCAAGATGAGTTTGAAGCAGAAGATCAAGAAGGA...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGTCCTTCTTGATCTTCTaGTTCAAACTCATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQSFLIF*FKLILL
Trigger: AAGCAAGATGAGTTTGAAGCAGAAGATCAAGAAGGA...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GGGGCCATGAGGGATAGTCTGTTGATGCCATTGTCACTGAGCAAGCGTTGCAAAGGGTGTGTCTTGGCCTaGTTCCTCTGGCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GAMRDSLLMPLSLSKRCKGCVLA*FLWLLL
Trigger: AAGAAGGAGCCAGAGGAAGCAGGCCAAGACACACCC...TTTGCAACGCTTGCTCAGTGACAATGGCATCAACAGACTATCCCTCATGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCCTTGTCTTCTCATCCTaGTCTCGCTGCTCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVLVFSS*SRCSAF
Trigger: AAACGCTGAGCAGCGAGAGCAGGATGAGAAGACAAG...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGCAAGTTGACTGGTTCTaGGAAGATGTGTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWQVDWF*EDVCRI
Trigger: GATCCTGCACACATCTTCGCAGAACCAGTCAACTTG...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGGCCGATGTTCTCTGCCTaGCGCCGGGCGTGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: RVKLKTAIAEKVHEERRRPMFSA*RRACRR
Trigger: CCTACGGCACGCCCGGCGGCAGGCAGAGAACATCGG...CCTTCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGCCGATGTTCTCTGCCTaGCGCCGGGCGTGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEPMFSA*RRACRR
Trigger: CCTACGGCACGCCCGGCGGCAGGCAGAGAACATCGG...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCGGGGCGTCAGACCACTaGAAGCTTCAAATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFGASDH*KLQMPV
Trigger: GACTGGCATTTGAAGCTTGCAGTGGTCTGACGCCCC...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
CDS-3UTR GCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGCTGCCAGGAGAACCATaGGATTGGTCAAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKLPGEP*DWSKLG
Trigger: CCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAG...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAGGCTGTGCCAGCTTCTaGCGAAGGGCATTGATCTCC +
Preference number: 4 (lower is better)
Translates to: IWERESKTGQWVQKMGPRGCASF*RRALIS
Trigger: GGAGATCAATGCCCTTCGGCAGAAGCTGGCACAGCC...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGTGGTGGTGGTGGCTGTaGCAGCTTCTGCCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWWWWWL*QLLPKG
Trigger: GCCCTTCGGCAGAAGCTGGCACAGCCACCACCACCA...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp GCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTTCTTCTGGCTCCTCCTaGAAGGCCTGCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: ASVAKAHSLAAVVIFPRASSGSS*KACSST
Trigger: TGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGA...AGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGAGTAATGATTTTGAGTaGGTCATAGATGCTGATACG +
Preference number: 4 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSSNDFE*VIDADT
Trigger: CGTATCAGCATCTATGACCCACTCAAAATCATTACT...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTTACCAGATGCATGCTTaGAGCAGGATTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISYQMHA*SRIPSF
Trigger: AAAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTA...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTAGGCGCCACCCTTATTaGGGCAAAGGATGCAATCCA +
Preference number: 4 (lower is better)
Translates to: FQHLELVHGVFHTQGQDFRRHPY*GKGCNP
Trigger: TGGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCT...AAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGATCCATGGCAGCCTGCTaGACTTTGACCTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRSMAAC*TLTCSR
Trigger: ACGAGAGCAGGTCAAAGTCCAGCAGGCTGCCATGGA...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTCAACAGAACATTGAATaGCATCAGCTCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: IHGISGISVGTSPALRCSQQNIE*HQLQLH
Trigger: ATGGAGCTGGAGCTGATGCCATTCAATGTTCTGTTG...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAGTAGAAAAATCCATTaGCTTGGATATGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQSRKIH*LGYEFQ
Trigger: CTGGAATTCATATCCAAGCCAATGGATTTTTCTACT...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CAGGTGGGACTCCAGCTTCCGCCTCATAGTAGAAAAATCCATTGGCTTGGATATAAGGTGCGGTACAGGTaGGACTCCAGCTTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QVGLQLPPHSRKIHWLGYKVRYR*DSSFRL
Trigger: GAGGCGGAAGCTGGAGTCCCACCTGTACCGCACCTT...ATATCCAAGCCAATGGATTTTTCTACTATGAGGCGGAAGCTGGAGTCCCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGCAGGACTTTGTCCCTTaGAAGCCACTGCCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWEQDFVP*KPLPGA
Trigger: CGCACCTGGCAGTGGCTTCCAAGGGACAAAGTCCTG...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATACTGTGCCCTGCGGGATaGAGGCAGGGCAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: NQRHCVATQWRTPVMETILCPAG*RQGKRM
Trigger: CATCCGCTTGCCCTGCCTCCATCCCGCAGGGCACAG...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGGGAGAACCATGCGATTaGTCAAAACTGGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKGEPCD*SKLGPC
Trigger: GCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCC...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGTTGGGTGGGAGTTTTTaGCACACAGCAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGLGGSF*HTAGLP
Trigger: TGGCAGGCCTGCTGTGTGCCAAAAACTCCCACCCAA...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGTTAGTGGGAGTAGGATaGAGCGGGCCAGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLLVGVG*SGPGSP
Trigger: GGGGCTGCCTGGCCCGCTCCATCCTACTCCCACTAA...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGCAAGACTGGGCAATaGGTGCAGAAGATGGGACCG +
Preference number: 4 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGSKTGQ*VQKMGP
Trigger: CGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCT...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAATCAACATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGCACACTTGCAGAGCTaGGAAGTTGTGTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: KSTWQSAACNWPCDFGAQAHLQS*EVVSTA
Trigger: AGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGC...CTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCATGTTGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
3UTR CAA 72 bp GTGTCAGGGGCCATGAGGGATAGTCTGTTGATGCCATaGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: VSGAMRDSLLMP*SLSKRCKGSFP
Trigger: AGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCATCAACAGACTATCCCTCATGGCCCCTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGTCTCCCGGGTGGGTaGGCACTTGAGACTGTAGGG +
Preference number: 4 (lower is better)
Translates to: NQRHCVATQWRTPVMETIGLPGG*ALETVG
Trigger: CCCTACAGTCTCAAGTGCTCACCCACCCGGGAGACC...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACATACTATTGCATTCGGTaGTATCCTGGGCAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: TQLTSTAPHKPPSTSMWTYYCIR*YPGQLA
Trigger: AGCTAACTGCCCAGGATATCACCGAATGCAATAGTA...TGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ATGCCATTGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGACTTGCCAGGGAACTaGGGCTGTTCACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: MPLSLSKRCKGSFPSCSGDLPGN*GCSLFS
Trigger: GGAAAACAGTGAACAGCCTCAGTTCCCTGGCAAGTC...ACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCGCGACTCTCCAAGTATaGCTCTTTCTCAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFATLQV*LFLKPV
Trigger: GACCGGCTTGAGAAAGAGTCATACTTGGAGAGTCGC...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAAGCGTCTTCATCGATaGGTGACTGTTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: IWERESKTGQWVQKMGPRKRLHR*VTVGPH
Trigger: GTGGGGCCCAACAGTCACTCATCGATGAAGACGCTT...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGCATCACTGGTCTGTTTaGAGGCGCCACCCTTATTGG +
Preference number: 4 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGHHWSV*RRHPYW
Trigger: CCAATAAGGGTGGCGCCTTCAAACAGACCAGTGATG...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGCCACTCACCCCGCCTTaGGCTTCCTGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVPLTPP*ASCSSS
Trigger: GGAAGAAGAGCAGGAAGCTCAAGGCGGGGTGAGTGG...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp ACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAAACTGGTTTTTCCTCTaGAAGGAGAGACCACTACAG +
Preference number: 4 (lower is better)
Translates to: TQLTSTAPHKPPSTSMWTNWFFL*KERPLQ
Trigger: CTGTAGTGGTCTCTCCTTTCAGAGGAAAAACCAGTT...TGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGATGCCAGTCCACCACTaGGACCCAAACTACATTCAG +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKMPVHH*DPNYIQ
Trigger: CTGAATGTAGTTTGGGTCTCAGTGGTGGACTGGCAT...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534400.5
CDS-3UTR TCA 90 bp AGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGAAAAGACCAGTGTGGTaGCGGTTTCTGTCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: STAPHKPPSTSMWTDGHSKRPVW*RFLSVW
Trigger: CCAAACTGACAGAAACCGTCACCACACTGGTCTTTT...CGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCGAGGGCAGACCCAGCTaGCGAGCACAGCTCCACACA +
Preference number: 4 (lower is better)
Translates to: REEVPRSYNTGLDKGHRVEGRPS*RAQLHT
Trigger: TGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTC...GACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTCACAGAGTCCACAGCTaGCCAACTACCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVHRVHS*PTTWGE
Trigger: CTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTG...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCAAACCTCACTCAAGTTaGCTGGTTCTGCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPKPHSS*LVLRRC
Trigger: ACATCTTCGCAGAACCAGTCAACTTGAGTGAGGTTT...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441123.1
CDS-3UTR GCA 90 bp AAATCAACATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAAGGAAGTACCAGATaGATGCTTGGAGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: KSTWQSAACNWPCDFGAQEGSTR*MLGAGF
Trigger: GAATCCTGCTCCAAGCATGCATCTGGTACTTCCTTC...CTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCATGTTGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTATTGGGGCAAAGGATaGAATCCACAGGCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWEYWGKG*NPQAGR
Trigger: CCTCCCGGCCTGTGGATTGCATCCTTTGCCCCAATA...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTAGCCCTTTCTGCTTaGAGATATAGCAGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLALALSA*RYSRLV
Trigger: AACTAACCTGCTATATCTGCAAGCAGAAAGGGCTAG...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ATGCCATTGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTTCATGCCGGAGCTTCTaGCAATACTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: MPLSLSKRCKGSFPSCSGSCRSF*QYFSSS
Trigger: GGAGGAGCTGAAGTATTGGCAGAAGCTCCGGCATGA...ACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp GCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGTGCTGGACTTTGACCTaGTCTCGTTTGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ACNWPCDFGAQEVKRNVQCWTLT*SRLSFS
Trigger: AGAGAAGCTCAAACGAGAGCAGGTCAAAGTCCAGCA...CTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGAGAACAGCAGGATCCTTCTCCTaGAGCAGGTCCAGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: NWPCDFGAQEVKRNVQRTAGSFS*SRSSVV
Trigger: GACAACACTGGACCTGCTGCAGGAGAAGGATCCTGC...TGTTCTCTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGTTCTGCGAAGATGTGTaGAGGATCCTTCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKFCEDV*RILLLQ
Trigger: CTGCAGGAGAAGGATCCTGCACACATCTTCGCAGAA...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCCAAGTTGACTGGTTCTaGGAAGATGTGTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLQVDWF*EDVCRI
Trigger: GATCCTGCACACATCTTCGCAGAACCAGTCAACTTG...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGACAAACTCCTCCAAGGTaGGGTACAGGTGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: IWERESKTGQWVQKMGPRQTPPR*GTGGTP
Trigger: TGGAGTCCCACCTGTACCGCACCTTGGAGGAGTTTG...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTCCGCAGGCGGACAGCTaGTCGGTGGAAAATTGTGTC +
Preference number: 4 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVPQADS*SVENCV
Trigger: GACACAATTTTCCACCGAGCAGCTGTCCGCCTGCGG...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGGATGGGAACGCCATTGTaGAGGAGGCCCTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RVKLKTAIAEKVHEERRRMGTPL*RRPSRG
Trigger: GCCCCGGGAGGGCCTCCTGCACAATGGCGTTCCCAT...CCTTCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGGAAGCCACTGCCAGGTaGGCTTGTTGTCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKEATAR*ACCQRR
Trigger: TCTTCTTTGACAACAAGCGCACCTGGCAGTGGCTTC...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGAAGCCACTGCCAGGTaGGCTTGTTGTCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ALIQGAHLQSWEVVSTAKEATAR*ACCQRR
Trigger: TCTTCTTTGACAACAAGCGCACCTGGCAGTGGCTTC...TTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp TTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGAAGCCACTGCCAGGTaGGCTTGTTGTCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: FQHLELVHGVFHTQGQDFEATAR*ACCQRR
Trigger: TCTTCTTTGACAACAAGCGCACCTGGCAGTGGCTTC...AAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAGAAGAGGCTTCTCTGTaGCCTGCGGGATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGEEASL*PAGWRQ
Trigger: CTGCCTCCATCCCGCAGGGCACAGAGAAGCCTCTTC...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGATCCAGGGGGCACACTTaGAGAGCTGGGAAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: IWERESKTGQWVQKMGPRSRGHT*RAGKLC
Trigger: ACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGA...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTGGCTGTGCCAGCTTCTaGCGAAGGGCATTGATCTCC +
Preference number: 4 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVGCASF*RRALIS
Trigger: GGAGATCAATGCCCTTCGGCAGAAGCTGGCACAGCC...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp AGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGGGCTCATTCCCTAGCTaGAGTGGTGATTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: STAPHKPPSTSMWTDGHSGSFPS*SGDFSK
Trigger: CTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCC...CGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR GCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGCAAAGCCGTTGGTCATaGCTGTCTCTTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLQSRWS*LSLPPA
Trigger: AGCAGGAGGAAGAGACAGGCATGACCAACGGCTTTG...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCAGGCGCCACCCTTATTaGGGCAAAGGATGCAATCCA +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFRRHPY*GKGCNP
Trigger: TGGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCT...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGACCTTATGGCACTGGATaGCTGCACCTAGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRPYGTG*LHLALS
Trigger: AGAAAGGGCTAGGTGCAGCCATCCAGTGCCATAAGG...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGTTCACCTTATGGCACTaGATGGCTGCACCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLFTLWH*MAAPSP
Trigger: AGGGCTAGGTGCAGCCATCCAGTGCCATAAGGTGAA...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCTTCACCTTATGGCACTaGATGGCTGCACCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFFTLWH*MAAPSP
Trigger: AGGGCTAGGTGCAGCCATCCAGTGCCATAAGGTGAA...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGGTAAGAGGGTATCTGTaGGACAGCAAGCATGGGGAG +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLVRGYL*DSKHGE
Trigger: CTCCCCATGCTTGCTGTCCCACAGATACCCTCTTAC...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ATGCCATTGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGTAAGAGGGTATCTGTaGGACAGCAAGCATGGGGAG +
Preference number: 4 (lower is better)
Translates to: MPLSLSKRCKGSFPSCSGVRGYL*DSKHGE
Trigger: CTCCCCATGCTTGCTGTCCCACAGATACCCTCTTAC...ACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGCTTTGGGACTGCAGATaGGAGTGCAAGCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWELWDCR*ECKRRI
Trigger: TATCCGGCGCTTGCACTCCCATCTGCAGTCCCAAAG...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGGAATTCCAGGTAATCTaGAACCTCACTCAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: PARRTMRLVKTGALPLVGEFQVI*NLTQVD
Trigger: GTCAACTTGAGTGAGGTTCCAGATTACCTGGAATTC...CCCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAAGTAGAAAAATCCATTaGCTTGGATATGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: AQSLAYHERGKLPAIHLASRKIH*LGYEFQ
Trigger: CTGGAATTCATATCCAAGCCAATGGATTTTTCTACT...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGAAGGTGCGGTACAGGTaGGACTCCAGCTTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWKVRYR*DSSFRL
Trigger: GAGGCGGAAGCTGGAGTCCCACCTGTACCGCACCTT...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTTGCCGGCCATACATCTaGCAGGGGCAGAAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVCRPYI*QGQKRL
Trigger: AAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCA...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGAGAACAGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 4 (lower is better)
Translates to: NWPCDFGAQEVKRNVQRTAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...TGTTCTCTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGTTCCCCCTGGGACCCTaGCGTATCCACGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVFPLGP*RIHGIS
Trigger: AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAA...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTTTCCCCCTGGGACCCTaGCGTATCCACGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: VAKAHSLAAVVIFPRAHLFPLGP*RIHGIS
Trigger: AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAA...AAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGTCAGCGGCCTGCAACTaGCCCTGCGACTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLSAACN*PCDFGA
Trigger: AGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGA...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAATGTATAAGAAGTTGTaGTGGTTGGTTGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: AQSLAYHERGKLPAIHLAMYKKL*WLVGCI
Trigger: AATACAACCAACCAACCACCACAACTTCTTATACAT...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTGTTATAGTGTTTTGTTaGTTCCCTTTTAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGVIVFC*FPFKLW
Trigger: CCAGAGTTTAAAAGGGAACCAACAAAACACTATAAC...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGGTTATAGTGTTTTGTTaGTTCCCTTTTAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: GGRGQTQLTSTAPHKPPSVIVFC*FPFKLW
Trigger: CCAGAGTTTAAAAGGGAACCAACAAAACACTATAAC...CGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGAAGAAGAGAAAGTGTTaGGGGGAAGAGATAGACATA +
Preference number: 4 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLKKRKC*GEEIDI
Trigger: TATGTCTATCTCTTCCCCCCAACACTTTCTCTTCTT...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGGGTCTCCCGGGTGGGTaGGCACTTGAGACTGTAGGG +
Preference number: 4 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKGLPGG*ALETVG
Trigger: CCCTACAGTCTCAAGTGCTCACCCACCCGGGAGACC...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAGACTTGCCAGGGAACTaGGGCTGTTCACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: IWERESKTGQWVQKMGPRDLPGN*GCSLFS
Trigger: GGAAAACAGTGAACAGCCTCAGTTCCCTGGCAAGTC...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGATAACATTGCTATTGTaGCATTCATCATCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWITLLL*HSSSRH
Trigger: GTGCCTGGATGATGAATGTCACAATAGCAATGTTAT...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGTGGGCTCAATCTTCATaGAGAGCCCAGCCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLWAQSS*RAQPAV
Trigger: CACAGCGGGCTGGGCTCTTCATGAAGATTGAGCCCA...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTCTTCCATGGGCTCAATCTTCATaGAGAGCCCAGCCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: KAHSLAAVVIFPRAHLLPWAQSS*RAQPAV
Trigger: CACAGCGGGCTGGGCTCTTCATGAAGATTGAGCCCA...TGGAAGAAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAATGCCAGTCCACCACTaGGACCCAAACTACATTCAG +
Preference number: 4 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRMPVHH*DPNYIQ
Trigger: CTGAATGTAGTTTGGGTCTCAGTGGTGGACTGGCAT...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR TCA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCAAGAGGGGACCCGCCTTaGTCCAGGGGGCACACTTGC +
Preference number: 4 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSRGDPP*SRGHTC
Trigger: GCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCT...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGAGGAGGCAGAGGGTTTaGAATAAAAGTAATGCATTC +
Preference number: 4 (lower is better)
Translates to: ACQENHAIGQNWGLALSGRRQRV*NKSNAF
Trigger: GAATGCATTACTTTTATTTCAAACCCTCTGCCTCCT...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGGTCTGCCGAAGGGCATTaGTCTCCCGGCGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RVKLKTAIAEKVHEERRRSAEGH*SPGVAG
Trigger: GCCTGCTACGCCGGGAGATCAATGCCCTTCGGCAGA...CCTTCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR TCA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGTGGATACTGTCTTGTTaGGTGATGGTGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGWILSC*VMVAVV
Trigger: CACCACAGCCACCATCACTCAACAAGACAGTATCCA...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR TCA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGCTTCTTGAAGAGGACTaGTGTGCGGCGACCCACACC +
Preference number: 4 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVLLEED*CAATHT
Trigger: GGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAAG...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGAGGGTTTCTTGGACTTaGCAGGGAACTGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLRVSWT*QGTEAV
Trigger: AACAGCCTCAGTTCCCTGGCAAGTCCAAGAAACCCT...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp TTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGAAGTACCAGATGCATaGTTGGAGCAGGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: FQHLELVHGVFHTQGQDFEVPDA*LEQDSF
Trigger: GAAGGAATCCTGCTCCAAGCATGCATCTGGTACTTC...AAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGGAAGGAAGTACCAGATaGATGCTTGGAGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKREGSTR*MLGAGF
Trigger: GAATCCTGCTCCAAGCATGCATCTGGTACTTCCTTC...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTCATGCCGGAGCTTCTaGCAATACTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWESCRSF*QYFSSS
Trigger: GGAGGAGCTGAAGTATTGGCAGAAGCTCCGGCATGA...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGCAAGTTGACTGGTTCTaGGAAGATGTGTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKRQVDWF*EDVCRI
Trigger: GATCCTGCACACATCTTCGCAGAACCAGTCAACTTG...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATGCCTGCAACTGGCCCTaGGACTTTGGTGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYACNWP*DFGAQE
Trigger: CTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTAGCAGCTCCTTCAGCTaGACCTCTGGGGACAAATGG +
Preference number: 4 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVSSSFS*TSGDKW
Trigger: CCATTTGTCCCCAGAGGTGCAGCTGAAGGAGCTGCT...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp AGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCCTCAGACAAGGAAGGTaGAGGCCCAGTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: REEVPRSYNTGLDKGHRVLRQGR*RPSGLQ
Trigger: CTGGAGCCCACTGGGCCTGCACCTTCCTTGTCTGAG...GACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR GCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGGGCGCTCTTCCTCGATaGTGGCTGGAGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEGALPR*WLERQE
Trigger: CTCCTGCCTCTCCAGCCAGCATCGAGGAAGAGCGCC...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp AGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCTCTCACTACAGCTCCTaGTCCTTGGCCGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: REEVPRSYNTGLDKGHRVSHYSS*SLAASG
Trigger: CCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGAGA...GACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CCA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTAGTAATGATTTTGAGTaGGTCATAGATGCTGATACG +
Preference number: 4 (lower is better)
Translates to: HERGKLPAIHLAGAEEASSNDFE*VIDADT
Trigger: CGTATCAGCATCTATGACCCACTCAAAATCATTACT...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCCAACAGAACATTGAATaGCATCAGCTCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLQQNIE*HQLQLH
Trigger: ATGGAGCTGGAGCTGATGCCATTCAATGTTCTGTTG...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGCTCACTCAAGTTGACTaGTTCTGCGAAGATGTGTGC +
Preference number: 4 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKRLTQVD*FCEDVC
Trigger: GCACACATCTTCGCAGAACCAGTCAACTTGAGTGAG...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CTCTGTCCCCATCGTCTTCTGGCTCCTCCTGCAAGGCCTGCTCCAGCACAGCTGAGTAGAAAAATCCATTaGCTTGGATATGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: LCPHRLLAPPARPAPAQLSRKIH*LGYEFQ
Trigger: CTGGAATTCATATCCAAGCCAATGGATTTTTCTACT...CAGCTGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATAAAAGTCTTCCAATTTaGGTGACTCGGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDKSLPI*VTRAGE
Trigger: CTCACCTGCCCGAGTCACCCAAATTGGAAGACTTTT...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGCAGGACTTTGTCCCTTaGAAGCCACTGCCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLQDFVP*KPLPGA
Trigger: CGCACCTGGCAGTGGCTTCCAAGGGACAAAGTCCTG...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAGAAGTGACGAAGGAGTaGGGCCCCCGGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: WRVKLKTAIAEKVHEERREVTKE*GPRTLL
Trigger: GAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACTTC...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CAGGTGGGACTCCAGCTTCCGCCTCATAGTAGAAAAATCCATTGGCTTGGATATGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 4 (lower is better)
Translates to: QVGLQLPPHSRKIHWLGYAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...ATATCCAAGCCAATGGATTTTTCTACTATGAGGCGGAAGCTGGAGTCCCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGGGAGAACCATGCGATTaGTCAAAACTGGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWEGEPCD*SKLGPC
Trigger: GCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCC...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGGGGGGTCATAGGTTGTaGGCTGGCCTCTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEGGHRL*AGLCLG
Trigger: GCCCAGACAGAGGCCAGCCCACAACCTATGACCCCC...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGATGCCATCCAGGTGGTaGAGAGTGAAGCTTAAGACT +
Preference number: 4 (lower is better)
Translates to: AETPPGIAAGLKGNETLKMPSRW*RVKLKT
Trigger: AGTCTTAAGCTTCACTCTCCACCACCTGGATGGCAT...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTATGCCATCCAGGTGGTaGAGAGTGAAGCTTAAGACT +
Preference number: 4 (lower is better)
Translates to: FQHLELVHGVFHTQGQDFMPSRW*RVKLKT
Trigger: AGTCTTAAGCTTCACTCTCCACCACCTGGATGGCAT...AAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR CCA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCATGTATAAGAAGTTGTaGTGGTTGGTTGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCMYKKL*WLVGCI
Trigger: AATACAACCAACCAACCACCACAACTTCTTATACAT...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCATCAACGACACTGTGTaGCCACACAATGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFINDTV*PHNGGL
Trigger: GAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGAT...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGATCAACGACACTGTGTaGCCACACAATGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLINDTV*PHNGGL
Trigger: GAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGAT...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGCCCCACTGGACCGCATaGCGCTCACCAGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEPHWTA*RSPGPV
Trigger: AACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGG...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGTGGCTGTGGTGGTGGTaGCTGTGCCAGCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEWLWWW*LCQLLP
Trigger: CGGCAGAAGCTGGCACAGCCACCACCACCACAGCCA...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGGTTTTCCAAAGCCGTTaGTCATGCCTGTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKRVFQSR*SCLSLP
Trigger: AGGAAGAGACAGGCATGACCAACGGCTTTGGAAAAC...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000534400.5
CDS-3UTR TCA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTAATAACATTGCTATTGTaGCATTCATCATCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLITLLL*HSSSRH
Trigger: GTGCCTGGATGATGAATGTCACAATAGCAATGTTAT...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGCCACTCACCCCGCCTTaGGCTTCCTGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKPLTPP*ASCSSS
Trigger: GGAAGAAGAGCAGGAAGCTCAAGGCGGGGTGAGTGG...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGACCACTCACCCCGCCTTaGGCTTCCTGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRPLTPP*ASCSSS
Trigger: GGAAGAAGAGCAGGAAGCTCAAGGCGGGGTGAGTGG...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGAACTGGTTTTTCCTCTaGAAGGAGAGACCACTACAG +
Preference number: 4 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKRNWFFL*KERPLQ
Trigger: CTGTAGTGGTCTCTCCTTTCAGAGGAAAAACCAGTT...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATAACTGGTTTTTCCTCTaGAAGGAGAGACCACTACAG +
Preference number: 4 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDNWFFL*KERPLQ
Trigger: CTGTAGTGGTCTCTCCTTTCAGAGGAAAAACCAGTT...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGAACCTCACTCAAGTTaGCTGGTTCTGCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGREPHSS*LVLRRC
Trigger: ACATCTTCGCAGAACCAGTCAACTTGAGTGAGGTTC...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGGAACCTCACTCAAGTTaGCTGGTTCTGCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLEPHSS*LVLRRC
Trigger: ACATCTTCGCAGAACCAGTCAACTTGAGTGAGGTTC...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATGTCTTCCAATTTGGGTaGCTCGGGCAGGTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYVFQFG*LGQVSA
Trigger: GGCACTCACCTGCCCGAGTCACCCAAATTGGAAGAC...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGCCCGGTTCTCTGGGATaGGGATGTTGTCCACGTCTT +
Preference number: 4 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVPGSLG*GCCPRL
Trigger: AAGACGTGGACAACATCCTCATCCCAGAGAACCGGG...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTTACTGTCTTGTTGAGTaGTGGTGGCTGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVYCLVE*WWLWWW
Trigger: CCACCACCACAGCCACCATCACTCAACAAGACAGTA...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGCAGCAGGAGGCTTCTaGGCCATTGTAGTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWAAGGF*AIVVRV
Trigger: GACTCTGACTACAATGGCTCAGAAGCCTCCTGCTGC...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449261.6
CDS-3UTR GCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGAAGTACCAGATGCATaGTTGGAGCAGGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGREVPDA*LEQDSF
Trigger: GAAGGAATCCTGCTCCAAGCATGCATCTGGTACTTC...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCGAAGGAAGTACCAGATaGATGCTTGGAGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFEGSTR*MLGAGF
Trigger: GAATCCTGCTCCAAGCATGCATCTGGTACTTCCTTC...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGGAAGGAAGTACCAGATaGATGCTTGGAGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLEGSTR*MLGAGF
Trigger: GAATCCTGCTCCAAGCATGCATCTGGTACTTCCTTC...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGTGCTTCTGGCTGGATaGCTGAGTCCACCATACGGA +
Preference number: 4 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVVLLAG*LSPPYG
Trigger: TCCGTATGGTGGACTCAGGCATCCAGCCAGAAGCAC...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGTTGGGCCCCACTGCTaGGACTCTCCAAGTATGACT +
Preference number: 4 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWVGPHC*DSPSMT
Trigger: AGTCATACTTGGAGAGTCGCAGCAGTGGGGCCCAAC...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAGTTGGGCCCCACTGCTaGGACTCTCCAAGTATGACT +
Preference number: 4 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGVGPHC*DSPSMT
Trigger: AGTCATACTTGGAGAGTCGCAGCAGTGGGGCCCAAC...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGCGTTTCTTTGGGACTaGAGATGGGAGTGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLAFLWD*RWECKR
Trigger: GCGCTTGCACTCCCATCTGCAGTCCCAAAGAAACGC...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGATGCTGGACTTTGACCTaGTCTCGTTTGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRCWTLT*SRLSFS
Trigger: AGAGAAGCTCAAACGAGAGCAGGTCAAAGTCCAGCA...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGACTGCAAGCTTCAAATaGCAGTCCACCACTGAGACC +
Preference number: 4 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWETASFK*QSTTET
Trigger: GGTCTCAGTGGTGGACTGGCATTTGAAGCTTGCAGT...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
CDS-3UTR GCA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGTCCCTTGGAAGCCACTaGCAGGTGCGCTTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWSLGSH*QVRLLS
Trigger: TGACAACAAGCGCACCTGGCAGTGGCTTCCAAGGGA...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATATGGCAATCAGCGGCCTaGAACTGGCCCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: NQRHCVATQWRTPVMETIWQSAA*NWPCDF
Trigger: AAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCA...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATTGGGCTTTAGGAACCTaGTTGGAGGTTTGCTATCAT +
Preference number: 4 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDWALGT*LEVCYH
Trigger: ATGATAGCAAACCTCCAAGCAGGTTCCTAAAGCCCA...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCGGCTCATTCCCTAGCTaGAGTGGTGATTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFGSFPS*SGDFSK
Trigger: CTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCC...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCAGTAATGATTTTGAGTaGGTCATAGATGCTGATACG +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLASNDFE*VIDADT
Trigger: CGTATCAGCATCTATGACCCACTCAAAATCATTACT...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAACATTCGGTGATATCCTaGGCAGTTAGCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: ALIQGAHLQSWEVVSTAKHSVIS*AVSSSS
Trigger: TGAAGATGAGCTAACTGCCCAGGATATCACCGAATG...TTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCTACCAGATGCATGCTTaGAGCAGGATTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLYQMHA*SRIPSF
Trigger: AAAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTA...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CAGGTGGGACTCCAGCTTCCGCCTCATAGTAGAAAAATCCATTGGCTTGGATATAGGCGCCACCCTTATTaGGGCAAAGGATGCAATCCA +
Preference number: 4 (lower is better)
Translates to: QVGLQLPPHSRKIHWLGYRRHPY*GKGCNP
Trigger: TGGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCT...ATATCCAAGCCAATGGATTTTTCTACTATGAGGCGGAAGCTGGAGTCCCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTGTAAGAGGGTATCTGTaGGACAGCAAGCATGGGGAG +
Preference number: 4 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVVRGYL*DSKHGE
Trigger: CTCCCCATGCTTGCTGTCCCACAGATACCCTCTTAC...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGACTTTGGGACTGCAGATaGGAGTGCAAGCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGLWDCR*ECKRRI
Trigger: TATCCGGCGCTTGCACTCCCATCTGCAGTCCCAAAG...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGCTCACTCAAGTTGACTaGTTCTGCGAAGATGTGTGC +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLLTQVD*FCEDVC
Trigger: GCACACATCTTCGCAGAACCAGTCAACTTGAGTGAG...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCCCTGAATTCCAGGTAATCTaGAACCTCACTCAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: HLELVHGVFHTQGQDFVPEFQVI*NLTQVD
Trigger: GTCAACTTGAGTGAGGTTCCAGATTACCTGGAATTC...AGGGACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449261.6
ENST00000534400.5
CDS-3UTR CCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAGGTGCGGTACAGGTaGGACTCCAGCTTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEKVRYR*DSSFRL
Trigger: GAGGCGGAAGCTGGAGTCCCACCTGTACCGCACCTT...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGACGGACAGCTGCTCGGTaGAAAATTGTGTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRRTAAR*KIVSLA
Trigger: TGCTAAAGACACAATTTTCCACCGAGCAGCTGTCCG...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ATGCCATTGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTAAAAGTCTTCCAATTTaGGTGACTCGGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: MPLSLSKRCKGSFPSCSGKSLPI*VTRAGE
Trigger: CTCACCTGCCCGAGTCACCCAAATTGGAAGACTTTT...ACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGACACTCGAGACAGGGCTaGCTTCCCACGGCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRHSRQG*LPTAAF
Trigger: AAACGCAGCCGTGGGAAGCCAGCCCTGTCTCGAGTG...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
CDS-3UTR CCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: NQRHCVATQWRTPVMETIRKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGAAAGCCCAGTCCCTaGCCTACCATGAGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYRKPSP*PTMRGG
Trigger: TCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCT...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGCGATTGGTCAAAACTaGGGCCTTGCCCTTAGTGGG +
Preference number: 4 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVAIGQN*GLALSG
Trigger: CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGC...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTGGAGAACCATGCGATTaGTCAAAACTGGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVGEPCD*SKLGPC
Trigger: GCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCC...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGCTGAGGGACCTTGGGTaGGAGTTTTTGGCACACAGC +
Preference number: 4 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWLRDLG*EFLAHS
Trigger: GCTGTGTGCCAAAAACTCCCACCCAAGGTCCCTCAG...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTGGCAATCTCCTAAGCTaGGCCCAAGCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSGNLLS*AQAPQL
Trigger: CAGCTGTGGGGCTTGGGCCCAGCTTAGGAGATTGCC...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGGTTCCCCCTGGGACCCTaGCGTATCCACGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: RVKLKTAIAEKVHEERRRFPLGP*RIHGIS
Trigger: AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAA...CCTTCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGAGCAAGACTGGGCAATaGGTGCAGAAGATGGGACCG +
Preference number: 4 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVSKTGQ*VQKMGP
Trigger: CGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCT...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGGCACACTTGCAGAGCTaGGAAGTTGTGTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWEAHLQS*EVVSTA
Trigger: AGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGC...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGCCCACCCTGAAGGCTTaGACCACCTCGTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEPTLKA*TTSWQQ
Trigger: TTGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGG...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTGCCATGCCATCCAGGTaGTGGAGAGTGAAGCTTAAG +
Preference number: 4 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVAMPSR*WRVKLK
Trigger: CTTAAGCTTCACTCTCCACCACCTGGATGGCATGGC...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGCTGGCCCTGCGACTTTaGTGCTCAGGAGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWLALRL*CSGGEK
Trigger: CTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAG...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTATGTATAAGAAGTTGTaGTGGTTGGTTGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: LGRFPLGPWRIHGISGISMYKKL*WLVGCI
Trigger: AATACAACCAACCAACCACCACAACTTCTTATACAT...ACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAAGTTATAGTGTTTTGTTaGTTCCCTTTTAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: DSPWDPGVSTASLGSVSEVIVFC*FPFKLW
Trigger: CCAGAGTTTAAAAGGGAACCAACAAAACACTATAAC...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAAAGAAGAGAAAGTGTTaGGGGGAAGAGATAGACATA +
Preference number: 4 (lower is better)
Translates to: TQLTSTAPHKPPSTSMWTKKRKC*GEEIDI
Trigger: TATGTCTATCTCTTCCCCCCAACACTTTCTCTTCTT...TGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTCTTCCAATGGGCCCGGTTCTCTaGGATGAGGATGTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: KAHSLAAVVIFPRAHLLPMGPVL*DEDVVH
Trigger: GTGGACAACATCCTCATCCCAGAGAACCGGGCCCAT...TGGAAGAAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGTTTTCCAAAGCCGTTaGTCATGCCTGTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRVFQSR*SCLSLP
Trigger: AGGAAGAGACAGGCATGACCAACGGCTTTGGAAAAC...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR TCA 90 bp CTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGTCCTCAACAGAACATTaGATGGCATCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LSKRCKGSFPSCSGDFSKSSTEH*MASAPA
Trigger: AGCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGA...CTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp AACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGAGAACAGAACCTCACTCAAGTTaGCTGGTTCTGCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: NWPCDFGAQEVKRNVQRTEPHSS*LVLRRC
Trigger: ACATCTTCGCAGAACCAGTCAACTTGAGTGAGGTTC...TGTTCTCTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTCCAGGTGGTGGAGAGTaGAGCTTAAGACTGCAATTG +
Preference number: 4 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVPGGGE*SLRLQL
Trigger: CAATTGCAGTCTTAAGCTTCACTCTCCACCACCTGG...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAGAAGGAAGTACCAGATaGATGCTTGGAGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: IWERESKTGQWVQKMGPREGSTR*MLGAGF
Trigger: GAATCCTGCTCCAAGCATGCATCTGGTACTTCCTTC...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTGAAGGAAGTACCAGATaGATGCTTGGAGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: ASVAKAHSLAAVVIFPRAEGSTR*MLGAGF
Trigger: GAATCCTGCTCCAAGCATGCATCTGGTACTTCCTTC...AGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATATATTGGGGCAAAGGATaGAATCCACAGGCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: NQRHCVATQWRTPVMETIYWGKG*NPQAGR
Trigger: CCTCCCGGCCTGTGGATTGCATCCTTTGCCCCAATA...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTCCTTCTTGATCTTCTaGTTCAAACTCATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTSFLIF*FKLILL
Trigger: AAGCAAGATGAGTTTGAAGCAGAAGATCAAGAAGGA...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGCGTTTCTTTGGGACTaGAGATGGGAGTGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: NQRHCVATQWRTPVMETIAFLWD*RWECKR
Trigger: GCGCTTGCACTCCCATCTGCAGTCCCAAAGAAACGC...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGAGAACACAAGTTGACTGGTTCTaGGAAGATGTGTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: NWPCDFGAQEVKRNVQRTQVDWF*EDVCRI
Trigger: GATCCTGCACACATCTTCGCAGAACCAGTCAACTTG...TGTTCTCTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGCCGCAGGCGGACAGCTaGTCGGTGGAAAATTGTGTC +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEPQADS*SVENCV
Trigger: GACACAATTTTCCACCGAGCAGCTGTCCGCCTGCGG...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAGACTGGGCAATGGGTaGAGAAGATGGGACCGAGAA +
Preference number: 4 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGRLGNG*RRWDRE
Trigger: TTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCT...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGACCTCGACAATCCGCTaGGCCTGGGCATATGTCAGG +
Preference number: 4 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKTSTIR*AWAYVR
Trigger: CCTGACATATGCCCAGGCCCAGCGGATTGTCGAGGT...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTTGGATGAGGGTTTCTTaGACTTGCCAGGGAACTGAG +
Preference number: 4 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVWMRVS*TCQGTE
Trigger: CTCAGTTCCCTGGCAAGTCCAAGAAACCCTCATCCA...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGTACCAGATGCATGCTTaGAGCAGGATTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LQSWEVVSTAKGKVCGWEYQMHA*SRIPSF
Trigger: AAAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTA...CTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGGGGGGTGCTTCTGGCTaGATGCCTGAGTCCACCATA +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEGGASG*MPESTI
Trigger: TATGGTGGACTCAGGCATCCAGCCAGAAGCACCCCC...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGACAAGCATGGGGAGAGTaGAGGGTGTGTCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRQAWGE*RVCLGL
Trigger: CAGGCCAAGACACACCCTCCACTCTCCCCATGCTTG...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATGAATTCCAGGTAATCTaGAACCTCACTCAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDEFQVI*NLTQVD
Trigger: GTCAACTTGAGTGAGGTTCCAGATTACCTGGAATTC...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAGTTTTCCAAAGCCGTTaGTCATGCCGTCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGVFQSR*SCRLPR
Trigger: CCTGGGAAGACGGCATGACCAACGGCTTTGGAAAAC...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339717.11
ENST00000449261.6
CDS-3UTR CCA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACACTCGAGACAGGGCTaGCTTCCCACGGCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSHSRQG*LPTAAF
Trigger: AAACGCAGCCGTGGGAAGCCAGCCCTGTCTCGAGTG...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
CDS-3UTR CCA 90 bp AGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGGCAGGACTTTGTCCCTTaGAAGCCACTGCCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: RVKLKTAIAEKVHEERRRQDFVP*KPLPGA
Trigger: CGCACCTGGCAGTGGCTTCCAAGGGACAAAGTCCTG...CCTTCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGTGCCGGCCATACATCTaGCAGGGGCAGAAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQECRPYI*QGQKRL
Trigger: AAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCA...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATCTGAGGGACCTTGGGTaGGAGTTTTTGGCACACAGC +
Preference number: 4 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYLRDLG*EFLAHS
Trigger: GCTGTGTGCCAAAAACTCCCACCCAAGGTCCCTCAG...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGTATCCACGGCATCTCTaGGATCAGTGTCGGAACCTC +
Preference number: 4 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWYPRHL*DQCRNL
Trigger: GAGGTTCCGACACTGATCCCAGAGATGCCGTGGATA...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCCCCTCGACATCCATGTaGACAGATGGACACTCGCAC +
Preference number: 4 (lower is better)
Translates to: REEVPRSYNTGLDKGHRVPSTSM*TDGHSH
Trigger: GTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGG...GACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGCCATGCCATCCAGGTaGTGGAGAGTGAAGCTTAAG +
Preference number: 4 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLAMPSR*WRVKLK
Trigger: CTTAAGCTTCACTCTCCACCACCTGGATGGCATGGC...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGGGGCCAGGAAGATGTTTaGTGGCAGGCGCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: RVKLKTAIAEKVHEERRRGQEDV*WQAPCH
Trigger: ATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCC...CCTTCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGTGCATTCCCTGGAGTTaGGAAGTGGGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVCIPWS*EVGVAE
Trigger: CTCTGCTACTCCCACTTCCCAACTCCAGGGAATGCA...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCATGTATAAGAAGTTGTaGTGGTTGGTTGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: TQQACQENHAIGQNWGLAMYKKL*WLVGCI
Trigger: AATACAACCAACCAACCACCACAACTTCTTATACAT...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGCTTCAGCTGCACCTCTaGGGACAAATGGGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKLQLHL*GQMGPV
Trigger: AACCGGGCCCATTTGTCCCCAGAGGTGCAGCTGAAG...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR TCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGCGACTCTCCAAGTATaGCTCTTTCTCAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: NQRHCVATQWRTPVMETIATLQV*LFLKPV
Trigger: GACCGGCTTGAGAAAGAGTCATACTTGGAGAGTCGC...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp TTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGATAACATTGCTATTGTaGCATTCATCATCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LQSWEVVSTAKGKVCGWEITLLL*HSSSRH
Trigger: GTGCCTGGATGATGAATGTCACAATAGCAATGTTAT...CTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGATGCCAGTCCACCACTaGGACCCAAACTACATTCAG +
Preference number: 4 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLMPVHH*DPNYIQ
Trigger: CTGAATGTAGTTTGGGTCTCAGTGGTGGACTGGCAT...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR TCA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAATAGGCCACCTGCACTaGCTTGCGGATGCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRIGHLH*LADAGL
Trigger: AAGACCAGCATCCGCAAGTCAGTGCAGGTGGCCTAT...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATAGGAGGCAGAGGGTTTaGAATAAAAGTAATGCATTC +
Preference number: 4 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDRRQRV*NKSNAF
Trigger: GAATGCATTACTTTTATTTCAAACCCTCTGCCTCCT...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAGCAGACACCAAACTGTaGCCATCTACTCGCCGTTTT +
Preference number: 4 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGADTKL*PSTRRF
Trigger: AAAACGGCGAGTAGATGGGCACAGTTTGGTGTCTGC...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGACTGTTGGGCCCCACTaGTGCGACTCTCCAAGTATG +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQETVGPH*CDSPSM
Trigger: CATACTTGGAGAGTCGCAGCAGTGGGGCCCAACAGT...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGACCACATGGGCCCAGTaGCCATCACTGGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQETTWAQ*PSLVCL
Trigger: CAAACAGACCAGTGATGGGCACTGGGCCCATGTGGT...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGCTAGCCCTTTCTGCTTaGAGATATAGCAGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLLALSA*RYSRLV
Trigger: AACTAACCTGCTATATCTGCAAGCAGAAAGGGCTAG...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCTCCTTCTTGATCTTCTaGTTCAAACTCATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLSFLIF*FKLILL
Trigger: AAGCAAGATGAGTTTGAAGCAGAAGATCAAGAAGGA...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAGGGTGTGTCTTGGCCTaGTTCCTCTGGCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRGCVLA*FLWLLL
Trigger: AAGAAGGAGCCAGAGGAAGCAGGCCAAGACACACCC...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTCAGCTCCTCCTTCACTaGACTTGTCTTCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: VAKAHSLAAVVIFPRAHLQLLLH*TCLLIL
Trigger: CAGGATGAGAAGACAAGTGCAGTGAAGGAGGAGCTG...AAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATATCATGCCGGAGCTTCTaGCAATACTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NQRHCVATQWRTPVMETISCRSF*QYFSSS
Trigger: GGAGGAGCTGAAGTATTGGCAGAAGCTCCGGCATGA...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGGCAGGATCCTTCTCCTaGAGCAGGTCCAGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKAGSFS*SRSSVV
Trigger: GACAACACTGGACCTGCTGCAGGAGAAGGATCCTGC...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACCGCAGGCGGACAGCTaGTCGGTGGAAAATTGTGTC +
Preference number: 4 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSPQADS*SVENCV
Trigger: GACACAATTTTCCACCGAGCAGCTGTCCGCCTGCGG...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTGAAGCCACTGCCAGGTaGGCTTGTTGTCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: VAKAHSLAAVVIFPRAHLEATAR*ACCQRR
Trigger: TCTTCTTTGACAACAAGCGCACCTGGCAGTGGCTTC...AAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532330.5
CDS-3UTR GCA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAAGCCACTGCCAGGTaGGCTTGTTGTCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWEATAR*ACCQRR
Trigger: TCTTCTTTGACAACAAGCGCACCTGGCAGTGGCTTC...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGTCACTGAGCAAGCGTTaGAAAGGCTCATTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVSLSKR*KGSFPS
Trigger: GCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGA...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CCA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGCATTCGGTGATATCCTaGGCAGTTAGCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWEHSVIS*AVSSSS
Trigger: TGAAGATGAGCTAACTGCCCAGGATATCACCGAATG...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATTTCACCTTATGGCACTaGATGGCTGCACCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYFTLWH*MAAPSP
Trigger: AGGGCTAGGTGCAGCCATCCAGTGCCATAAGGTGAA...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATGTAAGAGGGTATCTGTaGGACAGCAAGCATGGGGAG +
Preference number: 4 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYVRGYL*DSKHGE
Trigger: CTCCCCATGCTTGCTGTCCCACAGATACCCTCTTAC...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCTTTGGGACTGCAGATaGGAGTGCAAGCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSLWDCR*ECKRRI
Trigger: TATCCGGCGCTTGCACTCCCATCTGCAGTCCCAAAG...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCAACAGAACATTGAATaGCATCAGCTCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: ASVAKAHSLAAVVIFPRAQQNIE*HQLQLH
Trigger: ATGGAGCTGGAGCTGATGCCATTCAATGTTCTGTTG...AGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTAAGTAGAAAAATCCATTaGCTTGGATATGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLSRKIH*LGYEFQ
Trigger: CTGGAATTCATATCCAAGCCAATGGATTTTTCTACT...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGAGAACCATGCGATTaGTCAAAACTGGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: NQRHCVATQWRTPVMETIGEPCD*SKLGPC
Trigger: GCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCC...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGTTGGGTGGGAGTTTTTaGCACACAGCAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQELGGSF*HTAGLP
Trigger: TGGCAGGCCTGCTGTGTGCCAAAAACTCCCACCCAA...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGCTGGCCCTGCGACTTTaGTGCTCAGGAGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQELALRL*CSGGEK
Trigger: CTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAG...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGATGTATAAGAAGTTGTaGTGGTTGGTTGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: ADEHSSTQTTLDIHVDRWMYKKL*WLVGCI
Trigger: AATACAACCAACCAACCACCACAACTTCTTATACAT...CCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGAAGAAGAGAAAGTGTTaGGGGGAAGAGATAGACATA +
Preference number: 4 (lower is better)
Translates to: LQSWEVVSTAKGKVCGWEKKRKC*GEEIDI
Trigger: TATGTCTATCTCTTCCCCCCAACACTTTCTCTTCTT...CTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGGACTTGCCAGGGAACTaGGGCTGTTCACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEDLPGN*GCSLFS
Trigger: GGAAAACAGTGAACAGCCTCAGTTCCCTGGCAAGTC...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCATAACATTGCTATTGTaGCATTCATCATCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFITLLL*HSSSRH
Trigger: GTGCCTGGATGATGAATGTCACAATAGCAATGTTAT...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGCATCACTGGTCTGTTTaGAGGCGCCACCCTTATTGG +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEHHWSV*RRHPYW
Trigger: CCAATAAGGGTGGCGCCTTCAAACAGACCAGTGATG...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGTCCTCAACAGAACATTaGATGGCATCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVSSTEH*MASAPA
Trigger: AGCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGA...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGAAAAGACCAGTGTGGTaGCGGTTTCTGTCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLKRPVW*RFLSVW
Trigger: CCAAACTGACAGAAACCGTCACCACACTGGTCTTTT...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATACCAGGTGGTGGAGAGTaGAGCTTAAGACTGCAATTG +
Preference number: 4 (lower is better)
Translates to: NQRHCVATQWRTPVMETIPGGGE*SLRLQL
Trigger: CAATTGCAGTCTTAAGCTTCACTCTCCACCACCTGG...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCATTCTTGGCCTTCTTaGAGAGGACTGATGTGCGGC +
Preference number: 4 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSHSWPS*RGLMCG
Trigger: GCCGCACATCAGTCCTCTTCAAGAAGGCCAAGAATG...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR TCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGCATTCTTGGCCTTCTTaGAGAGGACTGATGTGCGGC +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEHSWPS*RGLMCG
Trigger: GCCGCACATCAGTCCTCTTCAAGAAGGCCAAGAATG...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR GCA 90 bp CTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGCTAGCCCTTTCTGCTTaGAGATATAGCAGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: LSKRCKGSFPSCSGDFSKLALSA*RYSRLV
Trigger: AACTAACCTGCTATATCTGCAAGCAGAAAGGGCTAG...CTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR GCA 90 bp AGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGGTCATCCTGCTCTCGCTaGTCAGCGTTTCTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: RVKLKTAIAEKVHEERRRSSCSR*SAFLWD
Trigger: GTCCCAAAGAAACGCTGAGCAGCGAGAGCAGGATGA...CCTTCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATCAGCTCCTCCTTCACTaGACTTGTCTTCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYQLLLH*TCLLIL
Trigger: CAGGATGAGAAGACAAGTGCAGTGAAGGAGGAGCTG...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGTCATGCCGGAGCTTCTaGCAATACTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKSCRSF*QYFSSS
Trigger: GGAGGAGCTGAAGTATTGGCAGAAGCTCCGGCATGA...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAAACTCCTCCAAGGTaGGGTACAGGTGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSQTPPR*GTGGTP
Trigger: TGGAGTCCCACCTGTACCGCACCTTGGAGGAGTTTG...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGACTGCCAGGAGAACCATaGGATTGGTCAAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRLPGEP*DWSKLG
Trigger: CCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAG...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGACTGGGCAATGGGTaGAGAAGATGGGACCGAGAA +
Preference number: 4 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRRLGNG*RRWDRE
Trigger: TTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCT...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCCTGCAAGCTTCAAATaGCAGTCCACCACTGAGACC +
Preference number: 4 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSPASFK*QSTTET
Trigger: GGTCTCAGTGGTGGACTGGCATTTGAAGCTTGCAGG...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CCA 90 bp GCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAAGTAATGATTTTGAGTaGGTCATAGATGCTGATACG +
Preference number: 4 (lower is better)
Translates to: ALIQGAHLQSWEVVSTAKSNDFE*VIDADT
Trigger: CGTATCAGCATCTATGACCCACTCAAAATCATTACT...TTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATATGGATGAGGGTTTCTTaGACTTGCCAGGGAACTGAG +
Preference number: 4 (lower is better)
Translates to: NQRHCVATQWRTPVMETIWMRVS*TCQGTE
Trigger: CTCAGTTCCCTGGCAAGTCCAAGAAACCCTCATCCA...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGATACCAGATGCATGCTTaGAGCAGGATTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: IWERESKTGQWVQKMGPRYQMHA*SRIPSF
Trigger: AAAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTA...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGCTCACTCAAGTTGACTaGTTCTGCGAAGATGTGTGC +
Preference number: 4 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVLTQVD*FCEDVC
Trigger: GCACACATCTTCGCAGAACCAGTCAACTTGAGTGAG...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGAAAAGTCTTCCAATTTaGGTGACTCGGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWKSLPI*VTRAGE
Trigger: CTCACCTGCCCGAGTCACCCAAATTGGAAGACTTTT...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATGCACACTTGCAGAGCTaGGAAGTTGTGTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYAHLQS*EVVSTA
Trigger: AGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGC...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTGCCATGCCATCCAGGTaGTGGAGAGTGAAGCTTAAG +
Preference number: 4 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSAMPSR*WRVKLK
Trigger: CTTAAGCTTCACTCTCCACCACCTGGATGGCATGGC...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGGTGCATTCCCTGGAGTTaGGAAGTGGGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RVKLKTAIAEKVHEERRRCIPWS*EVGVAE
Trigger: CTCTGCTACTCCCACTTCCCAACTCCAGGGAATGCA...CCTTCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGTTATAGTGTTTTGTTaGTTCCCTTTTAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLVIVFC*FPFKLW
Trigger: CCAGAGTTTAAAAGGGAACCAACAAAACACTATAAC...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGTGTGTGGCCACACAATaGAGGACTCCAGTAATGGAA +
Preference number: 4 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLCVATQ*RTPVME
Trigger: TTCCATTACTGGAGTCCTCCATTGTGTGGCCACACA...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GGGGCCATGAGGGATAGTCTGTTGATGCCATTGTCACTGAGCAAGCGTTGCAAAAAGAAGAGAAAGTGTTaGGGGGAAGAGATAGACATA +
Preference number: 4 (lower is better)
Translates to: GAMRDSLLMPLSLSKRCKKKRKC*GEEIDI
Trigger: TATGTCTATCTCTTCCCCCCAACACTTTCTCTTCTT...TTTGCAACGCTTGCTCAGTGACAATGGCATCAACAGACTATCCCTCATGGCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441123.1
CDS-3UTR TCA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGTACTATTGCATTCGGTaGTATCCTGGGCAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWYYCIR*YPGQLA
Trigger: AGCTAACTGCCCAGGATATCACCGAATGCAATAGTA...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGCTTTTTGCCCTTGGATaGGGGTTTCTTGGACTTGCC +
Preference number: 4 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKLFALG*GFLGLA
Trigger: GGCAAGTCCAAGAAACCCTCATCCAAGGGCAAAAAG...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAATAACATTGCTATTGTaGCATTCATCATCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: IWERESKTGQWVQKMGPRITLLL*HSSSRH
Trigger: GTGCCTGGATGATGAATGTCACAATAGCAATGTTAT...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGTCCTTCTTGATCTTCTaGTTCAAACTCATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: RHCVATQWRTPVMETIGLSFLIF*FKLILL
Trigger: AAGCAAGATGAGTTTGAAGCAGAAGATCAAGAAGGA...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAGAAGCCACTGCCAGGTaGGCTTGTTGTCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: WRVKLKTAIAEKVHEERREATAR*ACCQRR
Trigger: TCTTCTTTGACAACAAGCGCACCTGGCAGTGGCTTC...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCGGCTCATTCCCTAGCTaGAGTGGTGATTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: REEVPRSYNTGLDKGHRVGSFPS*SGDFSK
Trigger: CTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCC...GACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CCA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGATGGATGAGGGTTTCTTaGACTTGCCAGGGAACTGAG +
Preference number: 4 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRWMRVS*TCQGTE
Trigger: CTCAGTTCCCTGGCAAGTCCAAGAAACCCTCATCCA...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACCTTATGGCACTGGATaGCTGCACCTAGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSPYGTG*LHLALS
Trigger: AGAAAGGGCTAGGTGCAGCCATCCAGTGCCATAAGG...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCATGCATTCCCTGGAGTTaGGAAGTGGGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSCIPWS*EVGVAE
Trigger: CTCTGCTACTCCCACTTCCCAACTCCAGGGAATGCA...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTATGTATAAGAAGTTGTaGTGGTTGGTTGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: FQHLELVHGVFHTQGQDFMYKKL*WLVGCI
Trigger: AATACAACCAACCAACCACCACAACTTCTTATACAT...AAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR CCA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAATCAACGACACTGTGTaGCCACACAATGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRINDTV*PHNGGL
Trigger: GAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGAT...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCTACTATTGCATTCGGTaGTATCCTGGGCAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: REEVPRSYNTGLDKGHRVYYCIR*YPGQLA
Trigger: AGCTAACTGCCCAGGATATCACCGAATGCAATAGTA...GACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTCTTCCATGGCCTCAAGGGGAATaGGACATTAAAGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: KAHSLAAVVIFPRAHLLPWPQGE*DIKEKD
Trigger: GTCTTTTTCTTTAATGTCTCATTCCCCTTGAGGCCA...TGGAAGAAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR TCA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGTGGCCTCAAGGGGAATaGGACATTAAAGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWWPQGE*DIKEKD
Trigger: GTCTTTTTCTTTAATGTCTCATTCCCCTTGAGGCCA...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGGAAGTACCAGATGCATaGTTGGAGCAGGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKEVPDA*LEQDSF
Trigger: GAAGGAATCCTGCTCCAAGCATGCATCTGGTACTTC...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR GCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGCTAGCCCTTTCTGCTTaGAGATATAGCAGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLLALSA*RYSRLV
Trigger: AACTAACCTGCTATATCTGCAAGCAGAAAGGGCTAG...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACTTGTCTTCTCATCCTaGTCTCGCTGCTCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSLVFSS*SRCSAF
Trigger: AAACGCTGAGCAGCGAGAGCAGGATGAGAAGACAAG...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGTGCTGGACTTTGACCTaGTCTCGTTTGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKCWTLT*SRLSFS
Trigger: AGAGAAGCTCAAACGAGAGCAGGTCAAAGTCCAGCA...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATCAACAGAACATTGAATaGCATCAGCTCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYQQNIE*HQLQLH
Trigger: ATGGAGCTGGAGCTGATGCCATTCAATGTTCTGTTG...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGCTCACTCAAGTTGACTaGTTCTGCGAAGATGTGTGC +
Preference number: 4 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKLTQVD*FCEDVC
Trigger: GCACACATCTTCGCAGAACCAGTCAACTTGAGTGAG...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCGGACAGCTGCTCGGTaGAAAATTGTGTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSRTAAR*KIVSLA
Trigger: TGCTAAAGACACAATTTTCCACCGAGCAGCTGTCCG...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAGTCTTCCAATTTaGGTGACTCGGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEKSLPI*VTRAGE
Trigger: CTCACCTGCCCGAGTCACCCAAATTGGAAGACTTTT...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR TCA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTTACTATTGCATTCGGTaGTATCCTGGGCAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSYYCIR*YPGQLA
Trigger: AGCTAACTGCCCAGGATATCACCGAATGCAATAGTA...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGATAACATTGCTATTGTaGCATTCATCATCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLITLLL*HSSSRH
Trigger: GTGCCTGGATGATGAATGTCACAATAGCAATGTTAT...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATATGGCCTCAAGGGGAATaGGACATTAAAGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: NQRHCVATQWRTPVMETIWPQGE*DIKEKD
Trigger: GTCTTTTTCTTTAATGTCTCATTCCCCTTGAGGCCA...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR TCA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAGGAGGCAGAGGGTTTaGAATAAAAGTAATGCATTC +
Preference number: 4 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGRRQRV*NKSNAF
Trigger: GAATGCATTACTTTTATTTCAAACCCTCTGCCTCCT...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCATGCTGGACTTTGACCTaGTCTCGTTTGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSCWTLT*SRLSFS
Trigger: AGAGAAGCTCAAACGAGAGCAGGTCAAAGTCCAGCA...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGTAGAAAAATCCATTaGCTTGGATATGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: IWERESKTGQWVQKMGPRSRKIH*LGYEFQ
Trigger: CTGGAATTCATATCCAAGCCAATGGATTTTTCTACT...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGAAGAAGAGAAAGTGTTaGGGGGAAGAGATAGACATA +
Preference number: 4 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVKKRKC*GEEIDI
Trigger: TATGTCTATCTCTTCCCCCCAACACTTTCTCTTCTT...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCTAGCCCTTTCTGCTTaGAGATATAGCAGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSLALSA*RYSRLV
Trigger: AACTAACCTGCTATATCTGCAAGCAGAAAGGGCTAG...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR GCA 90 bp GTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTTCCTTCTTGATCTTCTaGTTCAAACTCATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: VAKAHSLAAVVIFPRAHLSFLIF*FKLILL
Trigger: AAGCAAGATGAGTTTGAAGCAGAAGATCAAGAAGGA...AAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGGAATTCCAGGTAATCTaGAACCTCACTCAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKEFQVI*NLTQVD
Trigger: GTCAACTTGAGTGAGGTTCCAGATTACCTGGAATTC...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCAGTAATGATTTTGAGTaGGTCATAGATGCTGATACG +
Preference number: 4 (lower is better)
Translates to: REEVPRSYNTGLDKGHRVSNDFE*VIDADT
Trigger: CGTATCAGCATCTATGACCCACTCAAAATCATTACT...GACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGTTATAGTGTTTTGTTaGTTCCCTTTTAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWVIVFC*FPFKLW
Trigger: CCAGAGTTTAAAAGGGAACCAACAAAACACTATAAC...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp GTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTGTTATAGTGTTTTGTTaGTTCCCTTTTAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: VAKAHSLAAVVIFPRAHLVIVFC*FPFKLW
Trigger: CCAGAGTTTAAAAGGGAACCAACAAAACACTATAAC...AAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441123.1
CDS-3UTR GCA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGTCCTTCTTGATCTTCTaGTTCAAACTCATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKSFLIF*FKLILL
Trigger: AAGCAAGATGAGTTTGAAGCAGAAGATCAAGAAGGA...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CCA 90 bp AGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGGAGTAATGATTTTGAGTaGGTCATAGATGCTGATACG +
Preference number: 4 (lower is better)
Translates to: RVKLKTAIAEKVHEERRRSNDFE*VIDADT
Trigger: CGTATCAGCATCTATGACCCACTCAAAATCATTACT...CCTTCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGTAGAAAAATCCATTaGCTTGGATATGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRSRKIH*LGYEFQ
Trigger: CTGGAATTCATATCCAAGCCAATGGATTTTTCTACT...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CCA 90 bp AGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAAGGAGTAGAAAAATCCATTaGCTTGGATATGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: RVKLKTAIAEKVHEERRRSRKIH*LGYEFQ
Trigger: CTGGAATTCATATCCAAGCCAATGGATTTTTCTACT...CCTTCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTTTCTTGGGCACTCCCTaGAGGGAGCCACTCACCCCG +
Preference number: 5 (lower is better)
Translates to: AGGHDGCGPHWTAWRSPGFLGTP*REPLTP
Trigger: CGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGAA...ACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS TCA 90 bp GCTGGGCCTGGGCATATGTCAGGGTCTCCCGGGTGGGTGAGCACTTaGGACTGTAGGGGGACGGGGAACGCCGGCCCTCGGCATTCTGCC +
Preference number: 5 (lower is better)
Translates to: AGPGHMSGSPGWVST*DCRGTGNAGPRHSA
Trigger: GGCAGAATGCCGAGGGCCGGCGTTCCCCGTCCCCCTACAGTCTCAAGTGCTCACCCACCCGGGAGACCCTGACATATGCCCAGGCCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000446974.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS TCA 90 bp GACAATCCGCTGGGCCTGGGCATATGTCAGGGTCTCCCGGGTGGGTaGGCACTTGAGACTGTAGGGGGACGGGGAACGCCGGCCCTCGGC +
Preference number: 5 (lower is better)
Translates to: DNPLGLGICQGLPGG*ALETVGGRGTPALG
Trigger: GCCGAGGGCCGGCGTTCCCCGTCCCCCTACAGTCTCAAGTGCTCACCCACCCGGGAGACCCTGACATATGCCCAGGCCCAGCGGATTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000446974.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCGGGATGGGAACGCCATaGTGCAGGAGGCCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: EGVGPPDSAQVDHRTVIGGMGTP*CRRPSR
Trigger: CCGGGAGGGCCTCCTGCACAATGGCGTTCCCATCCC...GCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACTACAGCTCCTGCTCCTaGGCCGCTTCCGGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: GVGPPDSAQVDHRTVIGHYSSCS*AASGSG
Trigger: GCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTA...GTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGTACAGCTCCTGCTCCTaGGCCGCTTCCGGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: PWPTMRGGSCRPYIWQGQYSSCS*AASGSG
Trigger: GCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTA...CTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTGTAAAGATGGTGCCATaGAGGCTGGTTTCGCGCATG +
Preference number: 5 (lower is better)
Translates to: AGGHDGCGPHWTAWRSPGVKMVP*RLVSRM
Trigger: CATGCGCGAAACCAGCCTCAATGGCACCATCTTTAC...ACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CAA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGAGTGGAGGGTGTGTCTaGGCCTGCTTCCTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPSGGCV*ACFLWL
Trigger: GAGCCAGAGGAAGCAGGCCAAGACACACCCTCCACT...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CGGGCGTGCCGTAGGATGGCCCCTCCCAGGTCCCGCAGGCGGACAGCTGCTCGGTTGACCTGCTCTCGTTaGAGCTTCTCTCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: RACRRMAPPRSRRRTAARLTCSR*SFSLFR
Trigger: TCGGAAGAGAGAGAAGCTCAAACGAGAGCAGGTCAA...CCGAGCAGCTGTCCGCCTGCGGGACCTGGGAGGGGCCATCCTACGGCACGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CAA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGGGAGCCCAGGACCTCTaGCCATCTGGGCAATCTCCT +
Preference number: 5 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPGAQDL*PSGQSP
Trigger: AGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCC...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCTACAGCTCCTGCTCCTaGGCCGCTTCCGGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCYSSCS*AASGSG
Trigger: GCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTA...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GCTGGCTGGAGAGGCAGGAGAGCCTGCCACACCATGGTCCTCGCCATTCTCCAGAGTGGAGGGTGTGTCTaGGCCTGCTTCCTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: AGWRGRRACHTMVLAILQSGGCV*ACFLWL
Trigger: GAGCCAGAGGAAGCAGGCCAAGACACACCCTCCACT...CTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCTCCAGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CAA 90 bp ATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAGGGATGGGAACGCCATaGTGCAGGAGGCCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: MAISGLQLALRLWCSGGEGMGTP*CRRPSR
Trigger: CCGGGAGGGCCTCCTGCACAATGGCGTTCCCATCCC...TTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGGGGATGGGAACGCCATaGTGCAGGAGGCCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: PARRTMRLVKTGALPLVGGMGTP*CRRPSR
Trigger: CCGGGAGGGCCTCCTGCACAATGGCGTTCCCATCCC...CCCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGCCACCTGCACTGACTaGCGGATGCTGGTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: LAYHERGKLPAIHLAGAEATCTD*RMLVLR
Trigger: CCGCAAGACCAGCATCCGCAAGTCAGTGCAGGTGGC...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGCCACCTGCACTGACTaGCGGATGCTGGTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVIATCTD*RMLVLR
Trigger: CCGCAAGACCAGCATCCGCAAGTCAGTGCAGGTGGC...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACGCCACCTGCACTGACTaGCGGATGCTGGTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: PWDPGVSTASLGSVSEPHATCTD*RMLVLR
Trigger: CCGCAAGACCAGCATCCGCAAGTCAGTGCAGGTGGC...GTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTGGAGCCCAGGACCTCTaGCCATCTGGGCAATCTCCT +
Preference number: 5 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGGAQDL*PSGQSP
Trigger: AGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCC...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CTCTGTCCCCATCGTCTTCTGGCTCCTCCTGCAAGGCCTGCTCCAGCACAGCTGAAGAGGGGACCCGCCTaGATCCAGGGGGCACACTTG +
Preference number: 5 (lower is better)
Translates to: LCPHRLLAPPARPAPAQLKRGPA*IQGAHL
Trigger: CAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT...CAGCTGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGACAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441123.1
CDS-3UTR CAA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTAGGCCAGGAAGATGTTaGGTGGCAGGCGCCATGCCA +
Preference number: 5 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGRPGRC*VAGAMP
Trigger: TGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCT...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCATTCTGCCGAAGGGCATaGATCTCCCGGCGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: AQSLAYHERGKLPAIHLAFCRRA*ISRRSR
Trigger: CCTGCTACGCCGGGAGATCAATGCCCTTCGGCAGAA...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTTTGGATACTGTCTTGTaGAGTGATGGTGGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: AGGHDGCGPHWTAWRSPGLDTVL*SDGGCG
Trigger: ACCACAGCCACCATCACTCAACAAGACAGTATCCAA...ACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CAA 90 bp GAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCGGCGGAGGAGGCAGTTaGGAGTCATCTCTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: EGVGPPDSAQVDHRTVIGGGGGS*ESSLSP
Trigger: TGGGGACAGAGATGACTCCAAACTGCCTCCTCCGCC...GCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp AGCAGGCGGACACGACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGATGAGGGATAGTCTGTaGATGCCATTGTCACTGAGC +
Preference number: 5 (lower is better)
Translates to: SRRTRRVRAPLDRMALTRMRDSL*MPLSLS
Trigger: GCTCAGTGACAATGGCATCAACAGACTATCCCTCAT...CCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTCGTGTCCGCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CAA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTTACAGCTCCTGCTCCTaGGCCGCTTCCGGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISYSSCS*AASGSG
Trigger: GCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTA...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCCACCGGGCAGGCGGGATATaGTCAATGCCCTCAATAGGT +
Preference number: 5 (lower is better)
Translates to: GVGPPDSAQVDHRTVIGHRAGGI*SMPSIG
Trigger: ACCTATTGAGGGCATTGACAATATCCCGCCTGCCCG...GTGGCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTTTCTTGGGCACTCCCTaGAGGGAGCCACTCACCCCG +
Preference number: 5 (lower is better)
Translates to: RIHGISGISVGTSPALRCFLGTP*REPLTP
Trigger: CGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGAA...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCAGTGGAGGGTGTGTCTaGGCCTGCTTCCTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLSGGCV*ACFLWL
Trigger: GAGCCAGAGGAAGCAGGCCAAGACACACCCTCCACT...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp ACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGGGATGGGAACGCCATaGTGCAGGAGGCCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: TQLTSTAPHKPPSTSMWTGMGTP*CRRPSR
Trigger: CCGGGAGGGCCTCCTGCACAATGGCGTTCCCATCCC...TGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGGAGCCCAGGACCTCTaGCCATCTGGGCAATCTCCT +
Preference number: 5 (lower is better)
Translates to: LAYHERGKLPAIHLAGAEGAQDL*PSGQSP
Trigger: AGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCC...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATAATCCAGGGGGCACACTaGCAGAGCTGGGAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: GEKAQSLAYHERGKLPAIIQGAH*QSWEVV
Trigger: CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGAT...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAAAGAGGGGACCCGCCTaGATCCAGGGGGCACACTTG +
Preference number: 5 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSKRGPA*IQGAHL
Trigger: CAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAATTCTGCCGAAGGGCATaGATCTCCCGGCGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: LAYHERGKLPAIHLAGAEFCRRA*ISRRSR
Trigger: CCTGCTACGCCGGGAGATCAATGCCCTTCGGCAGAA...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTTCTGCCGAAGGGCATaGATCTCCCGGCGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVFCRRA*ISRRSR
Trigger: CCTGCTACGCCGGGAGATCAATGCCCTTCGGCAGAA...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS GCA 90 bp TGGGGACAAATGGGCCCGGTTCTCTGGGATGAGGATGTTGTCCACTaGCAGGGAGAAGGGAGGACAGAAGGGGCTGAAGGACCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: WGQMGPVLWDEDVVH*QGEGRTEGAEGPAQ
Trigger: CTGGGCAGGTCCTTCAGCCCCTTCTGTCCTCCCTTCTCCCTGGCAGTGGACAACATCCTCATCCCAGAGAACCGGGCCCATTTGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532538.1
CDS CCA 90 bp GCGGGGGTGCTTCTGGCTGGATGCCTGAGTCCACCATACGGAAGCTaGGCTGTGGGAGGTGGAAGGAAGTACCAGATGCATGCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: AGVLLAGCLSPPYGS*AVGGGRKYQMHAWS
Trigger: GCTCCAAGCATGCATCTGGTACTTCCTTCCACCTCCCACAGCCCAGCTTCCGTATGGTGGACTCAGGCATCCAGCCAGAAGCACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CCA 90 bp GCTTCTAGGGGAGTCGCCCTTCCTCCTAGCAGTGGCCGCACCTGGTaGCGAGTGGGCCTCACAGTAGGCAGTCTTGCGCACTGTAAAGAT +
Preference number: 5 (lower is better)
Translates to: ASRGVALPPSSGRTW*RVGLTVGSLAHCKD
Trigger: ATCTTTACAGTGCGCAAGACTGCCTACTGTGAGGCCCACTCGCCACCAGGTGCGGCCACTGCTAGGAGGAAGGGCGACTCCCCTAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CCA 90 bp GATGCTTCTAGGGGAGTCGCCCTTCCTCCTAGCAGTGGCCGCACCTaGTGGCGAGTGGGCCTCACAGTAGGCAGTCTTGCGCACTGTAAA +
Preference number: 5 (lower is better)
Translates to: DASRGVALPPSSGRT*WRVGLTVGSLAHCK
Trigger: TTTACAGTGCGCAAGACTGCCTACTGTGAGGCCCACTCGCCACCAGGTGCGGCCACTGCTAGGAGGAAGGGCGACTCCCCTAGAAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACGGGCAGGCGGGATATaGTCAATGCCCTCAATAGGT +
Preference number: 5 (lower is better)
Translates to: GEKAQSLAYHERGKLPAIRAGGI*SMPSIG
Trigger: ACCTATTGAGGGCATTGACAATATCCCGCCTGCCCG...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp TTCTTGAAGAGGACTGATGTGCGGCGACCCACACCACTAAGTGGGGTACCGGCCTTCTTGGGCACTCCCTaGAGGGAGCCACTCACCCCG +
Preference number: 5 (lower is better)
Translates to: FLKRTDVRRPTPLSGVPAFLGTP*REPLTP
Trigger: CGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGAA...GGCCGGTACCCCACTTAGTGGTGTGGGTCGCCGCACATCAGTCCTCTTCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CAA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGAGTGGAGGGTGTGTCTaGGCCTGCTTCCTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLSGGCV*ACFLWL
Trigger: GAGCCAGAGGAAGCAGGCCAAGACACACCCTCCACT...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AGTGACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCCTGCTCAGCGTTTCTTaGGGACTGCAGATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: SDEGVGPPDSAQVDHRTVLLSVS*GLQMGV
Trigger: CACTCCCATCTGCAGTCCCAAAGAAACGCTGAGCAG...GACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGCTGCTCAGCGTTTCTTaGGGACTGCAGATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQLLSVS*GLQMGV
Trigger: CACTCCCATCTGCAGTCCCAAAGAAACGCTGAGCAG...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCGCAGCCTGCTGGACTTaGACCTGCTCTCGTTTGAGC +
Preference number: 5 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCAACWT*TCSRLS
Trigger: GCTCAAACGAGAGCAGGTCAAAGTCCAGCAGGCTGC...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp TGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGGCAGCCTGCTGGACTTaGACCTGCTCTCGTTTGAGC +
Preference number: 5 (lower is better)
Translates to: WGDSPWDPGVSTASLGSVAACWT*TCSRLS
Trigger: GCTCAAACGAGAGCAGGTCAAAGTCCAGCAGGCTGC...CACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGCGGCCTTCCAGCATCTaGAGCTTGTCCACGGTGTCT +
Preference number: 5 (lower is better)
Translates to: EIPPGTLAYPRHLWDQCRRPSSI*SLSTVS
Trigger: AGACACCGTGGACAAGCTCAAGATGCTGGAAGGCCG...CCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAACGGCCTTCCAGCATCTaGAGCTTGTCCACGGTGTCT +
Preference number: 5 (lower is better)
Translates to: LAYHERGKLPAIHLAGAERPSSI*SLSTVS
Trigger: AGACACCGTGGACAAGCTCAAGATGCTGGAAGGCCG...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGGCCTTCCAGCATCTaGAGCTTGTCCACGGTGTCT +
Preference number: 5 (lower is better)
Translates to: PGTLAYPRHLWDQCRNLTRPSSI*SLSTVS
Trigger: AGACACCGTGGACAAGCTCAAGATGCTGGAAGGCCG...GGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCTGTGCATCCAGGGGGCACACTaGCAGAGCTGGGAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: RGKLPAIHLAGAEEASLCIQGAH*QSWEVV
Trigger: CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGAT...GCACAGAGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGAAGAGGGGACCCGCCTaGATCCAGGGGGCACACTTG +
Preference number: 5 (lower is better)
Translates to: VVSTAKGKVCGWEVVSWGKRGPA*IQGAHL
Trigger: CAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT...CCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCAAGAGGGGACCCGCCTaGATCCAGGGGGCACACTTG +
Preference number: 5 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGKRGPA*IQGAHL
Trigger: CAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGAAGAGGGGACCCGCCTaGATCCAGGGGGCACACTTG +
Preference number: 5 (lower is better)
Translates to: PARRTMRLVKTGALPLVGKRGPA*IQGAHL
Trigger: CAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT...CCCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGAGGCCAGGAAGATGTTaGGTGGCAGGCGCCATGCCA +
Preference number: 5 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLRPGRC*VAGAMP
Trigger: TGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCT...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCATTCTGCCGAAGGGCATaGATCTCCCGGCGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSFCRRA*ISRRSR
Trigger: CCTGCTACGCCGGGAGATCAATGCCCTTCGGCAGAA...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR CAA 90 bp AAAGGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCGGCGGAGGAGGCAGTTaGGAGTCATCTCTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: KGGRGQTQLTSTAPHKPPGGGGS*ESSLSP
Trigger: TGGGGACAGAGATGACTCCAAACTGCCTCCTCCGCC...GGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS GCA 90 bp TCCTGCTCTCGCTGCTCAGCGTTTCTTTGGGACTGCAGATGGGAGTaGAAGCGCCGGATAAGAGGGACACCATTCCGTGCCTGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: SCSRCSAFLWDCRWE*KRRIRGTPFRACRF
Trigger: GAAGCGGCAGGCACGGAATGGTGTCCCTCTTATCCGGCGCTTGCACTCCCATCTGCAGTCCCAAAGAAACGCTGAGCAGCGAGAGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000527657.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CCA 90 bp CGATGCAGGCGTCCATCAATGTCTACCTCGACAATCCGCTGGGCCTaGGCATATGTCAGGGTCTCCCGGGTGGGTGAGCACTTGAGACTG +
Preference number: 5 (lower is better)
Translates to: RCRRPSMSTSTIRWA*AYVRVSRVGEHLRL
Trigger: CAGTCTCAAGTGCTCACCCACCCGGGAGACCCTGACATATGCCCAGGCCCAGCGGATTGTCGAGGTAGACATTGATGGACGCCTGCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000446974.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GGCCCAGCCCTGCCCTTACAGGTAGCTGGAAGTGACGAAGGAGTGGGGCCCCCGCAGGATTCCTTCTTTTaGCCCTTGGATGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: GPALPLQVAGSDEGVGPPQDSFF*PLDEGF
Trigger: GAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCTG...CGGGGGCCCCACTCCTTCGTCACTTCCAGCTACCTGTAAGGGCAGGGCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCAAAGGCGCCACCCTTATaGGGGCAAAGGATGCAATCC +
Preference number: 5 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAAKAPPL*GQRMQS
Trigger: GGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCTT...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAACGGGCAGGCGGGATATaGTCAATGCCCTCAATAGGT +
Preference number: 5 (lower is better)
Translates to: LAYHERGKLPAIHLAGAERAGGI*SMPSIG
Trigger: ACCTATTGAGGGCATTGACAATATCCCGCCTGCCCG...TTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGTAAAGATGGTGCCATaGAGGCTGGTTTCGCGCATG +
Preference number: 5 (lower is better)
Translates to: AQSLAYHERGKLPAIHLAVKMVP*RLVSRM
Trigger: CATGCGCGAAACCAGCCTCAATGGCACCATCTTTAC...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACTCATCTTGCTTTTCTaGGGCACTCCCTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: GEKAQSLAYHERGKLPAILILLF*GTPLRE
Trigger: CTCCCTCAAGGGAGTGCCCAAGAAAAGCAAGATGAG...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCAGTGGAGGGTGTGTCTaGGCCTGCTTCCTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGSGGCV*ACFLWL
Trigger: GAGCCAGAGGAAGCAGGCCAAGACACACCCTCCACT...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCACTGCTCAGCGTTTCTTaGGGACTGCAGATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAALLSVS*GLQMGV
Trigger: CACTCCCATCTGCAGTCCCAAAGAAACGCTGAGCAG...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATACTGCTCAGCGTTTCTTaGGGACTGCAGATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVILLSVS*GLQMGV
Trigger: CACTCCCATCTGCAGTCCCAAAGAAACGCTGAGCAG...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGCCCTCCCGGGGCATCTaGGGATCGATGATCAAGGCA +
Preference number: 5 (lower is better)
Translates to: ACQENHAIGQNWGLALSGPSRGI*GSMIKA
Trigger: TGCCTTGATCATCGATCCCAAGATGCCCCGGGAGGG...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp TTCACAGCAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGCCCTCCCGGGGCATCTaGGGATCGATGATCAAGGCA +
Preference number: 5 (lower is better)
Translates to: FTADATETHRPRATAGSEPSRGI*GSMIKA
Trigger: TGCCTTGATCATCGATCCCAAGATGCCCCGGGAGGG...CTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTGCTGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441730.2
CDS-3UTR CAA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTGCCACCTGCACTGACTaGCGGATGCTGGTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTATCTD*RMLVLR
Trigger: CCGCAAGACCAGCATCCGCAAGTCAGTGCAGGTGGC...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCGCCACCTGCACTGACTaGCGGATGCTGGTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPATCTD*RMLVLR
Trigger: CCGCAAGACCAGCATCCGCAAGTCAGTGCAGGTGGC...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTGGAGCCCAGGACCTCTaGCCATCTGGGCAATCTCCT +
Preference number: 5 (lower is better)
Translates to: IHGISGISVGTSPALRCSGAQDL*PSGQSP
Trigger: AGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCC...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGAGGCCAGGAAGATGTTaGGTGGCAGGCGCCATGCCA +
Preference number: 5 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWRPGRC*VAGAMP
Trigger: TGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCT...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGATGCATTCCCTGGAGTaGGGAAGTGGGAGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQMHSLE*GSGSSR
Trigger: TCTGCTACTCCCACTTCCCAACTCCAGGGAATGCAT...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACTCTGGGATGAGGATGTaGTCCACGTCTTCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: PWDPGVSTASLGSVSEPHSGMRM*STSSQE
Trigger: CTCCTGGGAAGACGTGGACAACATCCTCATCCCAGA...GTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS CCA 90 bp CTGATACGATGCAGGCGTCCATCAATGTCTACCTCGACAATCCGCTaGGCCTGGGCATATGTCAGGGTCTCCCGGGTGGGTGAGCACTTG +
Preference number: 5 (lower is better)
Translates to: LIRCRRPSMSTSTIR*AWAYVRVSRVGEHL
Trigger: CAAGTGCTCACCCACCCGGGAGACCCTGACATATGCCCAGGCCCAGCGGATTGTCGAGGTAGACATTGATGGACGCCTGCATCGTATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000446974.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTAAGGCGCCACCCTTATaGGGGCAAAGGATGCAATCC +
Preference number: 5 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISKAPPL*GQRMQS
Trigger: GGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCTT...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCCCATCACTGGTCTGTTaGAAGGCGCCACCCTTATTG +
Preference number: 5 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLPSLVC*KAPPLL
Trigger: CAATAAGGGTGGCGCCTTCAAACAGACCAGTGATGG...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTCGGGCAGGCGGGATATaGTCAATGCCCTCAATAGGT +
Preference number: 5 (lower is better)
Translates to: HERGKLPAIHLAGAEEASRAGGI*SMPSIG
Trigger: ACCTATTGAGGGCATTGACAATATCCCGCCTGCCCG...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GACACTCGCACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTAAAGATGGTGCCATaGAGGCTGGTTTCGCGCATG +
Preference number: 5 (lower is better)
Translates to: DTRTPSLIGAHPEGLDHLVKMVP*RLVSRM
Trigger: CATGCGCGAAACCAGCCTCAATGGCACCATCTTTAC...GAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGTGCGAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTGCAGCCTGCTGGACTTaGACCTGCTCTCGTTTGAGC +
Preference number: 5 (lower is better)
Translates to: RSQSPQLTNYLGRGEALAAACWT*TCSRLS
Trigger: GCTCAAACGAGAGCAGGTCAAAGTCCAGCAGGCTGC...AGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCGTCCTCAACAGAACATaGAATGGCATCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: EGVGPPDSAQVDHRTVIGVLNRT*NGISSS
Trigger: GCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGAC...GCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGTCCTCAACAGAACATaGAATGGCATCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQVLNRT*NGISSS
Trigger: GCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGAC...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTCCCTCCCGGGGCATCTaGGGATCGATGATCAAGGCA +
Preference number: 5 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTPSRGI*GSMIKA
Trigger: TGCCTTGATCATCGATCCCAAGATGCCCCGGGAGGG...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441730.2
ENST00000449261.6
CDS-3UTR CAA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATATCCAGCATCTTGAGCTaGTCCACGGTGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVISSILS*STVSST
Trigger: TGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGA...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGCGGCCTTCCAGCATCTaGAGCTTGTCCACGGTGTCT +
Preference number: 5 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWRPSSI*SLSTVS
Trigger: AGACACCGTGGACAAGCTCAAGATGCTGGAAGGCCG...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AGTGACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCTGCAGAGCTGGGAAGTaGTGTCAACAGCTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: SDEGVGPPDSAQVDHRTVCRAGK*CQQLKG
Trigger: TCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCA...GACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR CAA 90 bp GTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGATCCAGGGGGCACACTaGCAGAGCTGGGAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: VVSTAKGKVCGWEVVSWGIQGAH*QSWEVV
Trigger: CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGAT...CCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp ACACCCAGCCTGATAGGAGCCCACCCTGAAGGCTTGGACCACCTCGTGGCAGCAGCTGGCAGCTCCCCATaGGATACTGTCTTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: TPSLIGAHPEGLDHLVAAAGSSP*DTVLLS
Trigger: ACTCAACAAGACAGTATCCAATGGGGAGCTGCCAGC...TGCTGCCACGAGGTGGTCCAAGCCTTCAGGGTGGGCTCCTATCAGGCTGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CAA 90 bp CCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCGCTGGCAGCTCCCCATaGGATACTGTCTTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: PGTLAYPRHLWDQCRNLTAGSSP*DTVLLS
Trigger: ACTCAACAAGACAGTATCCAATGGGGAGCTGCCAGC...GGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCTGTTTTCCAAAGCCGTaGGTCATGCCTGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: EGVGPPDSAQVDHRTVIGCFPKP*VMPVSS
Trigger: GGAAGAGACAGGCATGACCAACGGCTTTGGAAAACA...GCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000534400.5
CDS CCA 90 bp TTCTCATCCTGCTCTCGCTGCTCAGCGTTTCTTTGGGACTGCAGATaGGAGTGCAAGCGCCGGATAAGAGGGACACCATTCCGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: FSSCSRCSAFLWDCR*ECKRRIRGTPFRAC
Trigger: GCAGGCACGGAATGGTGTCCCTCTTATCCGGCGCTTGCACTCCCATCTGCAGTCCCAAAGAAACGCTGAGCAGCGAGAGCAGGATGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000527657.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GCTGGCTGGAGAGGCAGGAGAGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGTACCAGATGCATGCTaGGAGCAGGATTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: AGWRGRRACHTMVLAILQVPDAC*EQDSFF
Trigger: AAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTAC...CTGGAGAATGGCGAGGACCATGGTGTGGCAGGCTCTCCTGCCTCTCCAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CAA 90 bp GTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGGTGGTGTCCTGGGGGCGGGCAGGCGGGATATaGTCAATGCCCTCAATAGGT +
Preference number: 5 (lower is better)
Translates to: VVSTAKGKVCGWEVVSWGRAGGI*SMPSIG
Trigger: ACCTATTGAGGGCATTGACAATATCCCGCCTGCCCG...CCCCCAGGACACCACCTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAATTCTTGGGCACTCCCTaGAGGGAGCCACTCACCCCG +
Preference number: 5 (lower is better)
Translates to: ALIQGAHLQSWEVVSTAKFLGTP*REPLTP
Trigger: CGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGAA...TTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTCTCATCTTGCTTTTCTaGGGCACTCCCTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: RIHGISGISVGTSPALRCLILLF*GTPLRE
Trigger: CTCCCTCAAGGGAGTGCCCAAGAAAAGCAAGATGAG...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGAGTGGAGGGTGTGTCTaGGCCTGCTTCCTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: STAPHKPPSTSMWTDGHSSGGCV*ACFLWL
Trigger: GAGCCAGAGGAAGCAGGCCAAGACACACCCTCCACT...CGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGGTCCTCAACAGAACATaGAATGGCATCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVVLNRT*NGISSS
Trigger: GCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGAC...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AGTGTGAGCTTGGGGAGATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTTGTTTTCCAAAGCCGTaGGTCATGCCGTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: SVSLGRFPLGPWRIHGISCFPKP*VMPSSQ
Trigger: CTGGGAAGACGGCATGACCAACGGCTTTGGAAAACA...AGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATCTCCCCAAGCTCACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339717.11
ENST00000449261.6
CDS-3UTR CAA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCATGTTTTCCAAAGCCGTaGGTCATGCCGTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSCFPKP*VMPSSQ
Trigger: CTGGGAAGACGGCATGACCAACGGCTTTGGAAAACA...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339717.11
ENST00000449261.6
CDS-3UTR CAA 90 bp TTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGCCACCTGCACTGACTaGCGGATGCTGGTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: FQHLELVHGVFHTQGQDFATCTD*RMLVLR
Trigger: CCGCAAGACCAGCATCCGCAAGTCAGTGCAGGTGGC...AAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp AAGAGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGAGGAGAACCATGCGATaGGTCAAAACTGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: KRGPALIQGAHLQSWEVVRRTMR*VKTGAL
Trigger: CAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCT...CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CCCTTCGCTCTCACTACAGCTCCTGCTCCTTGGCCGCTTCCGGGAGTGGCGCTCGAAAGTTGTGTTGGTTaGTCAGTCAGCATTCCCCAT +
Preference number: 5 (lower is better)
Translates to: PFALTTAPAPWPLPGVALESCVG*SVSIPH
Trigger: ATGGGGAATGCTGACTGACAAACCAACACAACTTTC...GAGCGCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTAGTGAGAGCGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441123.1
CDS-3UTR CAA 90 bp GACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTCCAGTTTCTCCAAACCTGCTTGGAGGTTaGCTATCATTAATGGGTTTC +
Preference number: 5 (lower is better)
Translates to: DGCGPHWTAWRSPGPVSPNLLGG*LSLMGF
Trigger: GAAACCCATTAATGATAGCAAACCTCCAAGCAGGTT...TGGAGAAACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CAA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAAGTCTGTTGATGCCATaGTCACTGAGCAAGCGTTGC +
Preference number: 5 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVISLLMP*SLSKRC
Trigger: GCAACGCTTGCTCAGTGACAATGGCATCAACAGACT...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAATGAGGGATAGTCTGTaGATGCCATTGTCACTGAGC +
Preference number: 5 (lower is better)
Translates to: AQSLAYHERGKLPAIHLAMRDSL*MPLSLS
Trigger: GCTCAGTGACAATGGCATCAACAGACTATCCCTCAT...TGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp ACGGGTGCGGGCCCCACTGGACCGCATGGCGCTCACCAGGTCCAGTTTCTCCAGTGTTCACTGTTTTCCTaGTTACTATTGCATTCGGTG +
Preference number: 5 (lower is better)
Translates to: TGAGPTGPHGAHQVQFLQCSLFS*LLLHSV
Trigger: CACCGAATGCAATAGTAACAAGGAAAACAGTGAACA...CTGGAGAAACTGGACCTGGTGAGCGCCATGCGGTCCAGTGGGGCCCGCACCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CAA 90 bp CCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCTCCTTCTTTTTGCCCTaGGATGAGGGTTTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: PGTLAYPRHLWDQCRNLTSFFLP*DEGFLD
Trigger: GTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGGA...GGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CTCTGTCCCCATCGTCTTCTGGCTCCTCCTGCAAGGCCTGCTCCAGCACAGCTGTCCTTCTTTTTGCCCTaGGATGAGGGTTTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: LCPHRLLAPPARPAPAQLSFFLP*DEGFLD
Trigger: GTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGGA...CAGCTGTGCTGGAGCAGGCCTTGCAGGAGGAGCCAGAAGACGATGGGGACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CAA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGCAGGATTCCTTCTTTTaGCCCTTGGATGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVQDSFF*PLDEGF
Trigger: GAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCTG...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAAAGGCGCCACCCTTATaGGGGCAAAGGATGCAATCC +
Preference number: 5 (lower is better)
Translates to: SRPARRTMRLVKTGALPLKAPPL*GQRMQS
Trigger: GGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCTT...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGCCATCACTGGTCTGTTaGAAGGCGCCACCCTTATTG +
Preference number: 5 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWPSLVC*KAPPLL
Trigger: CAATAAGGGTGGCGCCTTCAAACAGACCAGTGATGG...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTCGGGCAGGCGGGATATaGTCAATGCCCTCAATAGGT +
Preference number: 5 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTRAGGI*SMPSIG
Trigger: ACCTATTGAGGGCATTGACAATATCCCGCCTGCCCG...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTACGGGCAGGCGGGATATaGTCAATGCCCTCAATAGGT +
Preference number: 5 (lower is better)
Translates to: SRPARRTMRLVKTGALPLRAGGI*SMPSIG
Trigger: ACCTATTGAGGGCATTGACAATATCCCGCCTGCCCG...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CCCCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGCTCATCTTGCTTTTCTaGGGCACTCCCTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: PLKKEPRTSCHLGNLLSWLILLF*GTPLRE
Trigger: CTCCCTCAAGGGAGTGCCCAAGAAAAGCAAGATGAG...CCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GCGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTGCTTCAAACTCATCTaGCTTTTCTTGGGCACTCCC +
Preference number: 5 (lower is better)
Translates to: AYPRHLWDQCRNLTRPEVCFKLI*LFLGTP
Trigger: GGGAGTGCCCAAGAAAAGCAAGATGAGTTTGAAGCA...CACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGTTGACCTGCTCTCGTTaGAGCTTCTCTCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLLTCSR*SFSLFR
Trigger: TCGGAAGAGAGAGAAGCTCAAACGAGAGCAGGTCAA...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTGTCCTCAACAGAACATaGAATGGCATCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RIHGISGISVGTSPALRCVLNRT*NGISSS
Trigger: GCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGAC...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATCCCTCCCGGGGCATCTaGGGATCGATGATCAAGGCA +
Preference number: 5 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDPSRGI*GSMIKA
Trigger: TGCCTTGATCATCGATCCCAAGATGCCCCGGGAGGG...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTGGGATGGGAACGCCATaGTGCAGGAGGCCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVGMGTP*CRRPSR
Trigger: CCGGGAGGGCCTCCTGCACAATGGCGTTCCCATCCC...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTTCCAGCATCTTGAGCTaGTCCACGGTGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: IHGISGISVGTSPALRCSSSILS*STVSST
Trigger: TGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGA...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCCCTCGGCCTTCCAGCATCTaGAGCTTGTCCACGGTGTCT +
Preference number: 5 (lower is better)
Translates to: HLELVHGVFHTQGQDFVPRPSSI*SLSTVS
Trigger: AGACACCGTGGACAAGCTCAAGATGCTGGAAGGCCG...AGGGACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCAGGAGAACCATGCGATaGGTCAAAACTGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: TQQACQENHAIGQNWGLARRTMR*VKTGAL
Trigger: CAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCT...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCATCCAGGGGGCACACTaGCAGAGCTGGGAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLIQGAH*QSWEVV
Trigger: CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGAT...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp TTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGAGGCCAGGAAGATGTTaGGTGGCAGGCGCCATGCCA +
Preference number: 5 (lower is better)
Translates to: LQSWEVVSTAKGKVCGWERPGRC*VAGAMP
Trigger: TGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCT...CTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTATGCATTCCCTGGAGTaGGGAAGTGGGAGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: IHGISGISVGTSPALRCSMHSLE*GSGSSR
Trigger: TCTGCTACTCCCACTTCCCAACTCCAGGGAATGCAT...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GGGCAGAGCGCAGGCCAGGAAGATGTTTGGTGGCAGGCGCCATGCCATCCAGGTGAAAGTTGTGTTGGTTaGTCAGTCAGCATTCCCCAT +
Preference number: 5 (lower is better)
Translates to: GQSAGQEDVWWQAPCHPGESCVG*SVSIPH
Trigger: ATGGGGAATGCTGACTGACAAACCAACACAACTTTC...ACCTGGATGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCTGCGCTCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GACGAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATACCATTGGATACTGTCTaGTTGAGTGATGGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: DEGVGPPDSAQVDHRTVIPLDTV*LSDGGC
Trigger: ACAGCCACCATCACTCAACAAGACAGTATCCAATGG...TATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCGCTGGCAGCTCCCCATaGGATACTGTCTTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGAGSSP*DTVLLS
Trigger: ACTCAACAAGACAGTATCCAATGGGGAGCTGCCAGC...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATGGCGGAGGAGGCAGTTaGGAGTCATCTCTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDGGGGS*ESSLSP
Trigger: TGGGGACAGAGATGACTCCAAACTGCCTCCTCCGCC...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GATTCCCCCTGGGACCCTGGCGTATCCACGGCATCTCTGGGATCAGTGTCGGAAAGTCTGTTGATGCCATaGTCACTGAGCAAGCGTTGC +
Preference number: 5 (lower is better)
Translates to: DSPWDPGVSTASLGSVSESLLMP*SLSKRC
Trigger: GCAACGCTTGCTCAGTGACAATGGCATCAACAGACT...TTCCGACACTGATCCCAGAGATGCCGTGGATACGCCAGGGTCCCAGGGGGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTCTGTTGATGCCATaGTCACTGAGCAAGCGTTGC +
Preference number: 5 (lower is better)
Translates to: RIHGISGISVGTSPALRCSLLMP*SLSKRC
Trigger: GCAACGCTTGCTCAGTGACAATGGCATCAACAGACT...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp TTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTCCCTCCCGGGGCATCTaGGGATCGATGATCTGTCTC +
Preference number: 5 (lower is better)
Translates to: FQHLELVHGVFHTQGQDFPSRGI*GSMICL
Trigger: GAGACAGATCATCGATCCCAAGATGCCCCGGGAGGG...AAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532330.5
CDS-3UTR CAA 90 bp AAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGTCCTTCTTTTTGCCCTaGGATGAGGGTTTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: KAQSLAYHERGKLPAIHLSFFLP*DEGFLD
Trigger: GTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGGA...CAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AAAGGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCGTACCAGATGCATGCTaGGAGCAGGATTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: KGGRGQTQLTSTAPHKPPVPDAC*EQDSFF
Trigger: AAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTAC...GGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTCCATCACTGGTCTGTTaGAAGGCGCCACCCTTATTG +
Preference number: 5 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTPSLVC*KAPPLL
Trigger: CAATAAGGGTGGCGCCTTCAAACAGACCAGTGATGG...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCCTCATCTTGCTTTTCTaGGGCACTCCCTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPLILLF*GTPLRE
Trigger: CTCCCTCAAGGGAGTGCCCAAGAAAAGCAAGATGAG...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AGGGGACCCGCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCATGCTTCAAACTCATCTaGCTTTTCTTGGGCACTCCC +
Preference number: 5 (lower is better)
Translates to: RGPALIQGAHLQSWEVVSCFKLI*LFLGTP
Trigger: GGGAGTGCCCAAGAAAAGCAAGATGAGTTTGAAGCA...TGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAAGTGGAGGGTGTGTCTaGGCCTGCTTCCTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRSGGCV*ACFLWL
Trigger: GAGCCAGAGGAAGCAGGCCAAGACACACCCTCCACT...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGTTGACCTGCTCTCGTTaGAGCTTCTCTCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: ACQENHAIGQNWGLALSGLTCSR*SFSLFR
Trigger: TCGGAAGAGAGAGAAGCTCAAACGAGAGCAGGTCAA...CCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGCCCTCCCGGGGCATCTaGGGATCGATGATCAAGGCA +
Preference number: 5 (lower is better)
Translates to: RHCVATQWRTPVMETIGLPSRGI*GSMIKA
Trigger: TGCCTTGATCATCGATCCCAAGATGCCCCGGGAGGG...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTCCAGCATCTTGAGCTaGTCCACGGTGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTSSILS*STVSST
Trigger: TGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGA...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGCGGCCTTCCAGCATCTaGAGCTTGTCCACGGTGTCT +
Preference number: 5 (lower is better)
Translates to: AETPPGIAAGLKGNETLKRPSSI*SLSTVS
Trigger: AGACACCGTGGACAAGCTCAAGATGCTGGAAGGCCG...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGGCCACCTGCACTGACTaGCGGATGCTGGTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWEATCTD*RMLVLR
Trigger: CCGCAAGACCAGCATCCGCAAGTCAGTGCAGGTGGC...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGTGCAGAGCTGGGAAGTaGTGTCAACAGCTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: PARRTMRLVKTGALPLVGCRAGK*CQQLKG
Trigger: TCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCA...CCCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGAGAACAAAGAGGGGACCCGCCTaGATCCAGGGGGCACACTTG +
Preference number: 5 (lower is better)
Translates to: NWPCDFGAQEVKRNVQRTKRGPA*IQGAHL
Trigger: CAAGTGTGCCCCCTGGATCAAGGCGGGTCCCCTCTT...TGTTCTCTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATTTGGATACTGTCTTGTaGAGTGATGGTGGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: EKAQSLAYHERGKLPAIHLDTVL*SDGGCG
Trigger: ACCACAGCCACCATCACTCAACAAGACAGTATCCAA...ATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGCGGAGGAGGCAGTTaGGAGTCATCTCTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRGGGGS*ESSLSP
Trigger: TGGGGACAGAGATGACTCCAAACTGCCTCCTCCGCC...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CAA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCAGTCTGTTGATGCCATaGTCACTGAGCAAGCGTTGC +
Preference number: 5 (lower is better)
Translates to: TQQACQENHAIGQNWGLASLLMP*SLSKRC
Trigger: GCAACGCTTGCTCAGTGACAATGGCATCAACAGACT...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGTGTTTTCCAAAGCCGTaGGTCATGCCTGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PARRTMRLVKTGALPLVGCFPKP*VMPVSS
Trigger: GGAAGAGACAGGCATGACCAACGGCTTTGGAAAACA...CCCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000534400.5
CDS-3UTR CAA 90 bp GGGGAGAAAGCCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATATTTTCCTTGTTACTATaGCATTCGGTGATATCCTGG +
Preference number: 5 (lower is better)
Translates to: GEKAQSLAYHERGKLPAIFSLLL*HSVISW
Trigger: CCAGGATATCACCGAATGCAATAGTAACAAGGAAAA...TATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGGCTTTCTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CCCAGTCCCTGGCCTACCATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGTTTTCCTTGTTACTATaGCATTCGGTGATATCCTGG +
Preference number: 5 (lower is better)
Translates to: PSPWPTMRGGSCRPYIWQFSLLL*HSVISW
Trigger: CCAGGATATCACCGAATGCAATAGTAACAAGGAAAA...CTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATGGTAGGCCAGGGACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GAAGGAGTGGGGCCCCCGGACTCTGCTCAGGTGGATCATCGCACGGTCATAGGCTGTTCACTGTTTTCCTaGTTACTATTGCATTCGGTG +
Preference number: 5 (lower is better)
Translates to: EGVGPPDSAQVDHRTVIGCSLFS*LLLHSV
Trigger: CACCGAATGCAATAGTAACAAGGAAAACAGTGAACA...GCCTATGACCGTGCGATGATCCACCTGAGCAGAGTCCGGGGGCCCCACTCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCAGGATTCCTTCTTTTaGCCCTTGGATGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: TQQACQENHAIGQNWGLAQDSFF*PLDEGF
Trigger: GAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCTG...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTGTACCAGATGCATGCTaGGAGCAGGATTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: IHGISGISVGTSPALRCSVPDAC*EQDSFF
Trigger: AAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTAC...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCCCTCCATCACTGGTCTGTTaGAAGGCGCCACCCTTATTG +
Preference number: 5 (lower is better)
Translates to: HLELVHGVFHTQGQDFVPPSLVC*KAPPLL
Trigger: CAATAAGGGTGGCGCCTTCAAACAGACCAGTGATGG...AGGGACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTTTCTTGGGCACTCCCTaGAGGGAGCCACTCACCCCG +
Preference number: 5 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVFLGTP*REPLTP
Trigger: CGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGAA...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp ACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACATTGACCTGCTCTCGTTaGAGCTTCTCTCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: TQLTSTAPHKPPSTSMWTLTCSR*SFSLFR
Trigger: TCGGAAGAGAGAGAAGCTCAAACGAGAGCAGGTCAA...TGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCTCCAGCATCTTGAGCTaGTCCACGGTGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVSSILS*STVSST
Trigger: TGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGA...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGCGGCCTTCCAGCATCTaGAGCTTGTCCACGGTGTCT +
Preference number: 5 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGRPSSI*SLSTVS
Trigger: AGACACCGTGGACAAGCTCAAGATGCTGGAAGGCCG...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGACGGCCTTCCAGCATCTaGAGCTTGTCCACGGTGTCT +
Preference number: 5 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRRPSSI*SLSTVS
Trigger: AGACACCGTGGACAAGCTCAAGATGCTGGAAGGCCG...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCAGGAGAACCATGCGATaGGTCAAAACTGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVRRTMR*VKTGAL
Trigger: CAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCT...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTGGAGCCCAGGACCTCTaGCCATCTGGGCAATCTCCT +
Preference number: 5 (lower is better)
Translates to: ASVAKAHSLAAVVIFPRAGAQDL*PSGQSP
Trigger: AGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCC...AGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CAA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTATGCAGAGCTGGGAAGTaGTGTCAACAGCTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: SRPARRTMRLVKTGALPLCRAGK*CQQLKG
Trigger: TCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCA...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CCTTCCAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTGCAGAGCTGGGAAGTaGTGTCAACAGCTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: PSSILSLSTVSSTPKGRTCRAGK*CQQLKG
Trigger: TCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCA...AGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR CAA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCTTGGATACTGTCTTGTaGAGTGATGGTGGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: TQQACQENHAIGQNWGLALDTVL*SDGGCG
Trigger: ACCACAGCCACCATCACTCAACAAGACAGTATCCAA...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGATGAGGGATAGTCTGTaGATGCCATTGTCACTGAGC +
Preference number: 5 (lower is better)
Translates to: QTQLTSTAPHKPPSTSMWMRDSL*MPLSLS
Trigger: GCTCAGTGACAATGGCATCAACAGACTATCCCTCAT...CCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CAA 90 bp TTCACAGCAGACGCGACAGAGACACATAGGCCCCGTGCCACAGCAGGATCTGAGATGAGGGATAGTCTGTaGATGCCATTGTCACTGAGC +
Preference number: 5 (lower is better)
Translates to: FTADATETHRPRATAGSEMRDSL*MPLSLS
Trigger: GCTCAGTGACAATGGCATCAACAGACTATCCCTCAT...CTCAGATCCTGCTGTGGCACGGGGCCTATGTGTCTCTGTCGCGTCTGCTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CAA 90 bp AGCCTGCCACACCATGGTCCTCGCCATTCTCCAGGACCCTGTCTGGGCTTCTCTAAAACCTCACTCAAGTaGACTGGTTCTGCGAAGATG +
Preference number: 5 (lower is better)
Translates to: SLPHHGPRHSPGPCLGFSKTSLK*TGSAKM
Trigger: CATCTTCGCAGAACCAGTCAACTTGAGTGAGGTTTT...AGAGAAGCCCAGACAGGGTCCTGGAGAATGGCGAGGACCATGGTGTGGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS TCA 90 bp CAGCAGGAGGCTTCTGCCTGCAAGCTTCAAATGCCAGTCCACCACTaGGACCCAAACTACATTCAGAGTCAGACCCGCTTTCGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: QQEASACKLQMPVHH*DPNYIQSQTRFRCV
Trigger: AACACACCGAAAGCGGGTCTGACTCTGAATGTAGTTTGGGTCTCAGTGGTGGACTGGCATTTGAAGCTTGCAGGCAGAAGCCTCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441730.2
CDS GCA 90 bp AGCCGGTCTACCAGCAGCTCAAAGGTATCTGCAGACACCAAACTGTaGCCATCTACTCGCCGTTTTTCATTCACCATGTCCAGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: SRSTSSSKVSADTKL*PSTRRFSFTMSSQA
Trigger: TGCCTGGCTGGACATGGTGAATGAAAAACGGCGAGTAGATGGGCACAGTTTGGTGTCTGCAGATACCTTTGAGCTGCTGGTAGACCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CCA 90 bp TCCAGGCACACACAGCAGAAAGCGTCTTCATCGATGAGTGACTGTTaGGCCCCACTGCTGCGACTCTCCAAGTATGACTCTTTCTCAAGC +
Preference number: 5 (lower is better)
Translates to: SRHTQQKASSSMSDC*APLLRLSKYDSFSS
Trigger: GCTTGAGAAAGAGTCATACTTGGAGAGTCGCAGCAGTGGGGCCCAACAGTCACTCATCGATGAAGACGCTTTCTGCTGTGTGTGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTACAGGATTCCTTCTTTTaGCCCTTGGATGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: SRPARRTMRLVKTGALPLQDSFF*PLDEGF
Trigger: GAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCTG...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp ATGCCATTGTCACTGAGCAAGCGTTGCAAAGGCTCATTCCCTAGCTGCAGTGGTAAGGCGCCACCCTTATaGGGGCAAAGGATGCAATCC +
Preference number: 5 (lower is better)
Translates to: MPLSLSKRCKGSFPSCSGKAPPL*GQRMQS
Trigger: GGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCTT...ACCACTGCAGCTAGGGAATGAGCCTTTGCAACGCTTGCTCAGTGACAATGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CAA 90 bp TTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGCCATCACTGGTCTGTTaGAAGGCGCCACCCTTATTG +
Preference number: 5 (lower is better)
Translates to: LQSWEVVSTAKGKVCGWEPSLVC*KAPPLL
Trigger: CAATAAGGGTGGCGCCTTCAAACAGACCAGTGATGG...CTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGTAAAGATGGTGCCATaGAGGCTGGTTTCGCGCATG +
Preference number: 5 (lower is better)
Translates to: ALIQGAHLQSWEVVSTAKVKMVP*RLVSRM
Trigger: CATGCGCGAAACCAGCCTCAATGGCACCATCTTTAC...TTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGATTCTTGGGCACTCCCTaGAGGGAGCCACTCACCCCG +
Preference number: 5 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGFLGTP*REPLTP
Trigger: CGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGAA...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATCTCATCTTGCTTTTCTaGGGCACTCCCTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDLILLF*GTPLRE
Trigger: CTCCCTCAAGGGAGTGCCCAAGAAAAGCAAGATGAG...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGCTGCTCAGCGTTTCTTaGGGACTGCAGATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: RHCVATQWRTPVMETIGLLLSVS*GLQMGV
Trigger: CACTCCCATCTGCAGTCCCAAAGAAACGCTGAGCAG...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGGCAGCCTGCTGGACTTaGACCTGCTCTCGTTTGAGC +
Preference number: 5 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWEAACWT*TCSRLS
Trigger: GCTCAAACGAGAGCAGGTCAAAGTCCAGCAGGCTGC...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp ATATGGGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAGCAGCCTGCTGGACTTaGACCTGCTCTCGTTTGAGC +
Preference number: 5 (lower is better)
Translates to: IWERESKTGQWVQKMGPRAACWT*TCSRLS
Trigger: GCTCAAACGAGAGCAGGTCAAAGTCCAGCAGGCTGC...TCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCCCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGAGGGATGGGAACGCCATaGTGCAGGAGGCCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRGMGTP*CRRPSR
Trigger: CCGGGAGGGCCTCCTGCACAATGGCGTTCCCATCCC...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTCCAGCATCTTGAGCTaGTCCACGGTGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKRSSILS*STVSST
Trigger: TGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGA...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGAGGAGAACCATGCGATaGGTCAAAACTGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: AETPPGIAAGLKGNETLKRRTMR*VKTGAL
Trigger: CAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCT...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCCCTTGCAGAGCTGGGAAGTaGTGTCAACAGCTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: HLELVHGVFHTQGQDFVPCRAGK*CQQLKG
Trigger: TCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCA...AGGGACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
CDS-3UTR CAA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTAGGCCAGGAAGATGTTaGGTGGCAGGCGCCATGCCA +
Preference number: 5 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVRPGRC*VAGAMP
Trigger: TGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCT...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGATGCATTCCCTGGAGTaGGGAAGTGGGAGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: AETPPGIAAGLKGNETLKMHSLE*GSGSSR
Trigger: TCTGCTACTCCCACTTCCCAACTCCAGGGAATGCAT...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp ATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTAGTGAAAGTTGTGTTGGTTaGTCAGTCAGCATTCCCCAT +
Preference number: 5 (lower is better)
Translates to: IHGISGISVGTSPALRCSESCVG*SVSIPH
Trigger: ATGGGGAATGCTGACTGACAAACCAACACAACTTTC...ACTACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATATACAGCTCCTGCTCCTaGGCCGCTTCCGGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: NQRHCVATQWRTPVMETIYSSCS*AASGSG
Trigger: GCCACTCCCGGAAGCGGCCAAGGAGCAGGAGCTGTA...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CAA 90 bp GCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGGAGGTGAAAAGAAATGTCCAGTGTTTTCCAAAGCCGTaGGTCATGCCTGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: ACNWPCDFGAQEVKRNVQCFPKP*VMPVSS
Trigger: GGAAGAGACAGGCATGACCAACGGCTTTGGAAAACA...CTGGACATTTCTTTTCACCTCCTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS TCA 90 bp GACATTCATCATCCAGGCACACACAGCAGAAAGCGTCTTCATCGATaGGTGACTGTTGGGCCCCACTGCTGCGACTCTCCAAGTATGACT +
Preference number: 5 (lower is better)
Translates to: DIHHPGTHSRKRLHR*VTVGPHCCDSPSMT
Trigger: AGTCATACTTGGAGAGTCGCAGCAGTGGGGCCCAACAGTCACTCATCGATGAAGACGCTTTCTGCTGTGTGTGCCTGGATGATGAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS GCA 90 bp ATACGGAAGCTGGGCTGTGGGAGGTGGAAGGAAGTACCAGATGCATaGTTGGAGCAGGATTCCTTCTTTTTGCCCTTGGATGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: IRKLGCGRWKEVPDA*LEQDSFFLPLDEGF
Trigger: GAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTACTTCCTTCCACCTCCCACAGCCCAGCTTCCGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS GCA 90 bp GAGGGTGTGTCTTGGCCTGCTTCCTCTGGCTCCTTCTTGATCTTCTaGTTCAAACTCATCTTGCTTTTCTTGGGCACTCCCTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: EGVSWPASSGSFLIF*FKLILLFLGTPLRE
Trigger: CTCCCTCAAGGGAGTGCCCAAGAAAAGCAAGATGAGTTTGAAGCAGAAGATCAAGAAGGAGCCAGAGGAAGCAGGCCAAGACACACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CATGAGAGGGGGAAGCTGCCGGCCATACATCTGGCAGGGGCAGAAGAGGCTTCTTGTTCACTGTTTTCCTaGTTACTATTGCATTCGGTG +
Preference number: 5 (lower is better)
Translates to: HERGKLPAIHLAGAEEASCSLFS*LLLHSV
Trigger: CACCGAATGCAATAGTAACAAGGAAAACAGTGAACA...AGAAGCCTCTTCTGCCCCTGCCAGATGTATGGCCGGCAGCTTCCCCCTCTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AAATCAACATGGCAATCAGCGGCCTGCAACTGGCCCTGCGACTTTGGTGCTCAGTCCTTCTTTTTGCCCTaGGATGAGGGTTTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: KSTWQSAACNWPCDFGAQSFFLP*DEGFLD
Trigger: GTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGGA...CTGAGCACCAAAGTCGCAGGGCCAGTTGCAGGCCGCTGATTGCCATGTTGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCTCCTTCTTTTTGCCCTaGGATGAGGGTTTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLSFFLP*DEGFLD
Trigger: GTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGGA...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCCCTCAGGATTCCTTCTTTTaGCCCTTGGATGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: HLELVHGVFHTQGQDFVPQDSFF*PLDEGF
Trigger: GAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCTG...AGGGACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GAGCACAGCTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCCAGGATTCCTTCTTTTaGCCCTTGGATGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: EHSSTQTTLDIHVDRWTLQDSFF*PLDEGF
Trigger: GAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCTG...GAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAGCTGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGCCATCACTGGTCTGTTaGAAGGCGCCACCCTTATTG +
Preference number: 5 (lower is better)
Translates to: RHCVATQWRTPVMETIGLPSLVC*KAPPLL
Trigger: CAATAAGGGTGGCGCCTTCAAACAGACCAGTGATGG...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCGTAAAGATGGTGCCATaGAGGCTGGTTTCGCGCATG +
Preference number: 5 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFVKMVP*RLVSRM
Trigger: CATGCGCGAAACCAGCCTCAATGGCACCATCTTTAC...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CAGCATCTTGAGCTTGTCCACGGTGTCTTCCACACCCAAGGGCAGGACTTTGTCTGCTTCAAACTCATCTaGCTTTTCTTGGGCACTCCC +
Preference number: 5 (lower is better)
Translates to: QHLELVHGVFHTQGQDFVCFKLI*LFLGTP
Trigger: GGGAGTGCCCAAGAAAAGCAAGATGAGTTTGAAGCA...GACAAAGTCCTGCCCTTGGGTGTGGAAGACACCGTGGACAAGCTCAAGATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGTTGACCTGCTCTCGTTaGAGCTTCTCTCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: AETPPGIAAGLKGNETLKLTCSR*SFSLFR
Trigger: TCGGAAGAGAGAGAAGCTCAAACGAGAGCAGGTCAA...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCAGGGATGGGAACGCCATaGTGCAGGAGGCCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSGMGTP*CRRPSR
Trigger: CCGGGAGGGCCTCCTGCACAATGGCGTTCCCATCCC...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGAGGAGAACCATGCGATaGGTCAAAACTGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: RHCVATQWRTPVMETIGLRRTMR*VKTGAL
Trigger: CAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCT...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGAGAAGGAGAACCATGCGATaGGTCAAAACTGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: HRFRQRSQSPQLTNYLGRRRTMR*VKTGAL
Trigger: CAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCT...TCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAGGAGCCCAGGACCTCTaGCCATCTGGGCAATCTCCT +
Preference number: 5 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGGAQDL*PSGQSP
Trigger: AGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCC...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CAGGTGGGACTCCAGCTTCCGCCTCATAGTAGAAAAATCCATTGGCTTGGATATATCCAGGGGGCACACTaGCAGAGCTGGGAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: QVGLQLPPHSRKIHWLGYIQGAH*QSWEVV
Trigger: CACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGAT...ATATCCAAGCCAATGGATTTTTCTACTATGAGGCGGAAGCTGGAGTCCCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441123.1
CDS-3UTR CAA 90 bp CAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGGGGATGCATTCCCTGGAGTaGGGAAGTGGGAGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: QHRFRQRSQSPQLTNYLGMHSLE*GSGSSR
Trigger: TCTGCTACTCCCACTTCCCAACTCCAGGGAATGCAT...CCCCAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AAAGGGGGAAGAGGGCAGACCCAGCTGACGAGCACAGCTCCACACAAACCACCCCAAATGTATAAGAAGTaGTGGTGGTTGGTTGGTTGT +
Preference number: 5 (lower is better)
Translates to: KGGRGQTQLTSTAPHKPPQMYKK*WWLVGC
Trigger: ACAACCAACCAACCACCACAACTTCTTATACATTTG...GGGTGGTTTGTGTGGAGCTGTGCTCGTCAGCTGGGTCTGCCCTCTTCCCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CGTATCCACGGCATCTCTGGGATCAGTGTCGGAACCTCACCCGCCCTGAGGTGTCAAATGTATAAGAAGTaGTGGTGGTTGGTTGGTTGT +
Preference number: 5 (lower is better)
Translates to: RIHGISGISVGTSPALRCQMYKK*WWLVGC
Trigger: ACAACCAACCAACCACCACAACTTCTTATACATTTG...ACACCTCAGGGCGGGTGAGGTTCCGACACTGATCCCAGAGATGCCGTGGATACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GCCTTGATCCAGGGGGCACACTTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAATGTTTTCCAAAGCCGTaGGTCATGCCTGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: ALIQGAHLQSWEVVSTAKCFPKP*VMPVSS
Trigger: GGAAGAGACAGGCATGACCAACGGCTTTGGAAAACA...TTTAGCTGTTGACACAACTTCCCAGCTCTGCAAGTGTGCCCCCTGGATCAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CAA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCAAAACCTCACTCAAGTaGACTGGTTCTGCGAAGATG +
Preference number: 5 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPKTSLK*TGSAKM
Trigger: CATCTTCGCAGAACCAGTCAACTTGAGTGAGGTTTT...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441123.1
CDS TCA 90 bp GACCACTACAGATCTTGTTCAACCTTGAGTAGAGGCACACGGAAGTaGAAGACAAGGTCAGTGGGCAGCCCAGATTACAGCCTGTGCATC +
Preference number: 5 (lower is better)
Translates to: DHYRSCSTLSRGTRK*KTRSVGSPDYSLCI
Trigger: GATGCACAGGCTGTAATCTGGGCTGCCCACTGACCTTGTCTTTCACTTCCGTGTGCCTCTACTCAAGGTTGAACAAGATCTGTAGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527657.1
CDS GCA 90 bp GTAATCTGGAACCTCACTCAAGTTGACTGGTTCTGCGAAGATGTGTaGAGGATCCTTCTCCTGCAGCAGGTCCAGTGTTGTCCTCAACAG +
Preference number: 5 (lower is better)
Translates to: VIWNLTQVDWFCEDV*RILLLQQVQCCPQQ
Trigger: CTGTTGAGGACAACACTGGACCTGCTGCAGGAGAAGGATCCTGCACACATCTTCGCAGAACCAGTCAACTTGAGTGAGGTTCCAGATTAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp ACACAGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCTTTTCCTTGTTACTATaGCATTCGGTGATATCCTGG +
Preference number: 5 (lower is better)
Translates to: TQQACQENHAIGQNWGLAFSLLL*HSVISW
Trigger: CCAGGATATCACCGAATGCAATAGTAACAAGGAAAA...GGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CCTCAAGAAGGAGCCCAGGACCTCTTGCCATCTGGGCAATCTCCTAAGCTGGGCTGTTCACTGTTTTCCTaGTTACTATTGCATTCGGTG +
Preference number: 5 (lower is better)
Translates to: PQEGAQDLLPSGQSPKLGCSLFS*LLLHSV
Trigger: CACCGAATGCAATAGTAACAAGGAAAACAGTGAACA...GCCCAGCTTAGGAGATTGCCCAGATGGCAAGAGGTCCTGGGCTCCTTCTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGTCCTTCTTTTTGCCCTaGGATGAGGGTTTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: AETPPGIAAGLKGNETLKSFFLP*DEGFLD
Trigger: GTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGGA...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATGTACCAGATGCATGCTaGGAGCAGGATTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDVPDAC*EQDSFF
Trigger: AAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTAC...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTTTCTTGGGCACTCCCTaGAGGGAGCCACTCACCCCG +
Preference number: 5 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSFLGTP*REPLTP
Trigger: CGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGAA...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGCTCATCTTGCTTTTCTaGGGCACTCCCTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWELILLF*GTPLRE
Trigger: CTCCCTCAAGGGAGTGCCCAAGAAAAGCAAGATGAG...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCAGGAAGATGTTaGGTGGCAGGCGCCATGCCA +
Preference number: 5 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYRPGRC*VAGAMP
Trigger: TGGCATGGCGCCTGCCACCAAACATCTTCCTGGCCT...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAGTGGGGCAAATGTATAAGAAGTaGTGGTGGTTGGTTGGTTGT +
Preference number: 5 (lower is better)
Translates to: PARRTMRLVKTGALPLVGQMYKK*WWLVGC
Trigger: ACAACCAACCAACCACCACAACTTCTTATACATTTG...CCCCACTAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp TTGCAGAGCTGGGAAGTTGTGTCAACAGCTAAAGGGAAGGTCTGTGGGTGGGAGTTGGATACTGTCTTGTaGAGTGATGGTGGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: LQSWEVVSTAKGKVCGWELDTVL*SDGGCG
Trigger: ACCACAGCCACCATCACTCAACAAGACAGTATCCAA...CTCCCACCCACAGACCTTCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR CAA 90 bp GCAGAGACACCACCTGGCATAGCAGCTGGCCTCAAGGGGAATGAGACATTAAAGCCATTGGATACTGTCTaGTTGAGTGATGGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: AETPPGIAAGLKGNETLKPLDTV*LSDGGC
Trigger: ACAGCCACCATCACTCAACAAGACAGTATCCAATGG...CTTTAATGTCTCATTCCCCTTGAGGCCAGCTGCTATGCCAGGTGGTGTCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp CAGAGTCCACAGCTGACCAACTACCTGGGGAGAGGGGAAGCACTGGCTCCTTTAAACCTGCTTGGAGGTTaGCTATCATTAATGGGTTTC +
Preference number: 5 (lower is better)
Translates to: QSPQLTNYLGRGEALAPLNLLGG*LSLMGF
Trigger: GAAACCCATTAATGATAGCAAACCTCCAAGCAGGTT...TAAAGGAGCCAGTGCTTCCCCTCTCCCCAGGTAGTTGGTCAGCTGTGGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CAA 90 bp AGCAGGCCTGCCAGGAGAACCATGCGATTGGTCAAAACTGGGGCCTTGCCCTTAAACCTGCTTGGAGGTTaGCTATCATTAATGGGTTTC +
Preference number: 5 (lower is better)
Translates to: SRPARRTMRLVKTGALPLNLLGG*LSLMGF
Trigger: GAAACCCATTAATGATAGCAAACCTCCAAGCAGGTT...TAAGGGCAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCTGGCAGGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATATGAGGGATAGTCTGTaGATGCCATTGTCACTGAGC +
Preference number: 5 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDMRDSL*MPLSLS
Trigger: GCTCAGTGACAATGGCATCAACAGACTATCCCTCAT...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS TCA 90 bp ACCAGATGCATGCTTGGAGCAGGATTCCTTCTTTTTGCCCTTGGATaGGGGTTTCTTGGACTTGCCAGGGAACTGAGGCTGTTCACTGTT +
Preference number: 5 (lower is better)
Translates to: TRCMLGAGFLLFALG*GFLGLARELRLFTV
Trigger: AACAGTGAACAGCCTCAGTTCCCTGGCAAGTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCTGCTCCAAGCATGCATCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS GCA 90 bp CTCAAGTTGACTGGTTCTGCGAAGATGTGTGCAGGATCCTTCTCCTaGAGCAGGTCCAGTGTTGTCCTCAACAGAACATTGAATGGCATC +
Preference number: 5 (lower is better)
Translates to: LKLTGSAKMCAGSFS*SRSSVVLNRTLNGI
Trigger: GATGCCATTCAATGTTCTGTTGAGGACAACACTGGACCTGCTGCAGGAGAAGGATCCTGCACACATCTTCGCAGAACCAGTCAACTTGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CCA 90 bp AAGTACCAGATGCATGCTTGGAGCAGGATTCCTTCTTTTTGCCCTTaGATGAGGGTTTCTTGGACTTGCCAGGGAACTGAGGCTGTTCAC +
Preference number: 5 (lower is better)
Translates to: KYQMHAWSRIPSFCP*MRVSWTCQGTEAVH
Trigger: GTGAACAGCCTCAGTTCCCTGGCAAGTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CTCCACACAAACCACCCTCGACATCCATGTGGACAGATGGACACTCGCACACCCTTTTCCTTGTTACTATaGCATTCGGTGATATCCTGG +
Preference number: 5 (lower is better)
Translates to: LHTNHPRHPCGQMDTRTPFSLLL*HSVISW
Trigger: CCAGGATATCACCGAATGCAATAGTAACAAGGAAAA...GGGTGTGCGAGTGTCCATCTGTCCACATGGATGTCGAGGGTGGTTTGTGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGGCCTGGTACCAGATGCATGCTaGGAGCAGGATTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: RHCVATQWRTPVMETIGLVPDAC*EQDSFF
Trigger: AAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTAC...CAGGCCTATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AAGGCTCATTCCCTAGCTGCAGTGGTGATTTTTCCAAGAGCTCATCTTCTTCCAAAGGCGCCACCCTTATaGGGGCAAAGGATGCAATCC +
Preference number: 5 (lower is better)
Translates to: KAHSLAAVVIFPRAHLLPKAPPL*GQRMQS
Trigger: GGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCTT...TGGAAGAAGATGAGCTCTTGGAAAAATCACCACTGCAGCTAGGGAATGAGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CAA 90 bp TCCTTTAAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGACTGCTCAGCGTTTCTTaGGGACTGCAGATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: SFKSTTLCGHTMEDSSNGLLSVS*GLQMGV
Trigger: CACTCCCATCTGCAGTCCCAAAGAAACGCTGAGCAG...TCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTTAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCGCAGCCTGCTGGACTTaGACCTGCTCTCGTTTGAGC +
Preference number: 5 (lower is better)
Translates to: REEVPRSYNTGLDKGHRVAACWT*TCSRLS
Trigger: GCTCAAACGAGAGCAGGTCAAAGTCCAGCAGGCTGC...GACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTAGGAGAACCATGCGATaGGTCAAAACTGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVRRTMR*VKTGAL
Trigger: CAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCT...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGGAAAGTTGTGTTGGTTaGTCAGTCAGCATTCCCCAT +
Preference number: 5 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKRESCVG*SVSIPH
Trigger: ATGGGGAATGCTGACTGACAAACCAACACAACTTTC...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GGGGCCATGAGGGATAGTCTGTTGATGCCATTGTCACTGAGCAAGCGTTGCAAACCATTGGATACTGTCTaGTTGAGTGATGGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: GAMRDSLLMPLSLSKRCKPLDTV*LSDGGC
Trigger: ACAGCCACCATCACTCAACAAGACAGTATCCAATGG...TTTGCAACGCTTGCTCAGTGACAATGGCATCAACAGACTATCCCTCATGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441123.1
ENST00000532330.5
CDS-3UTR CAA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTGGCGGAGGAGGCAGTTaGGAGTCATCTCTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSGGGGS*ESSLSP
Trigger: TGGGGACAGAGATGACTCCAAACTGCCTCCTCCGCC...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS TCA 90 bp GTTTTTCCTCTGAAAGGAGAGACCACTACAGATCTTGTTCAACCTTaGGTAGAGGCACACGGAAGTGAAAGACAAGGTCAGTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: VFPLKGETTTDLVQP*VEAHGSERQGQWAA
Trigger: GGCTGCCCACTGACCTTGTCTTTCACTTCCGTGTGCCTCTACTCAAGGTTGAACAAGATCTGTAGTGGTCTCTCCTTTCAGAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527657.1
CDS CCA 90 bp GCTTGGAGCAGGATTCCTTCTTTTTGCCCTTGGATGAGGGTTTCTTaGACTTGCCAGGGAACTGAGGCTGTTCACTGTTTTCCTTGTTAC +
Preference number: 5 (lower is better)
Translates to: AWSRIPSFCPWMRVS*TCQGTEAVHCFPCY
Trigger: GTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGGCAAGTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCTGCTCCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp CTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGGTACCAGATGCATGCTaGGAGCAGGATTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: LLLTGSSVKYPLRDLGWEVPDAC*EQDSFF
Trigger: AAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTAC...CTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAAGGCGCCACCCTTATaGGGGCAAAGGATGCAATCC +
Preference number: 5 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYKAPPL*GQRMQS
Trigger: GGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCTT...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGCCATCACTGGTCTGTTaGAAGGCGCCACCCTTATTG +
Preference number: 5 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWPSLVC*KAPPLL
Trigger: CAATAAGGGTGGCGCCTTCAAACAGACCAGTGATGG...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGCTCATCTTGCTTTTCTaGGGCACTCCCTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLLILLF*GTPLRE
Trigger: CTCCCTCAAGGGAGTGCCCAAGAAAAGCAAGATGAG...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGGCAGCCTGCTGGACTTaGACCTGCTCTCGTTTGAGC +
Preference number: 5 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKAACWT*TCSRLS
Trigger: GCTCAAACGAGAGCAGGTCAAAGTCCAGCAGGCTGC...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGTCCAGCATCTTGAGCTaGTCCACGGTGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWSSILS*STVSST
Trigger: TGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGA...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGTCCAGCATCTTGAGCTaGTCCACGGTGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVSSILS*STVSST
Trigger: TGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGA...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp TTACAACACAGGTTTAGACAAAGGTCACAGAGTCCACAGCTGACCAACTACCTGAGGAGAACCATGCGATaGGTCAAAACTGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LQHRFRQRSQSPQLTNYLRRTMR*VKTGAL
Trigger: CAAGGCCCCAGTTTTGACCAATCGCATGGTTCTCCT...CAGGTAGTTGGTCAGCTGTGGACTCTGTGACCTTTGTCTAAACCTGTGTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGCTGGCAGCTCCCCATaGGATACTGTCTTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVAGSSP*DTVLLS
Trigger: ACTCAACAAGACAGTATCCAATGGGGAGCTGCCAGC...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp GGAAAGAGAAAGCAAGACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTTCACTGTTTTCCTaGTTACTATTGCATTCGGTG +
Preference number: 5 (lower is better)
Translates to: GKRKQDWAMGAEDGTEKRCSLFS*LLLHSV
Trigger: CACCGAATGCAATAGTAACAAGGAAAACAGTGAACA...CCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGTCTTGCTTTCTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp ACTGGGCAATGGGTGCAGAAGATGGGACCGAGAAGAGGTGTGAGAATAGGCGATTGTTCACTGTTTTCCTaGTTACTATTGCATTCGGTG +
Preference number: 5 (lower is better)
Translates to: TGQWVQKMGPRRGVRIGDCSLFS*LLLHSV
Trigger: CACCGAATGCAATAGTAACAAGGAAAACAGTGAACA...ATCGCCTATTCTCACACCTCTTCTCGGTCCCATCTTCTGCACCCATTGCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp ACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAGTTGTACCAGATGCATGCTaGGAGCAGGATTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: TSNWFFSEISPEGPWVGVVPDAC*EQDSFF
Trigger: AAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTAC...AACTCCCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTAAGGCGCCACCCTTATaGGGGCAAAGGATGCAATCC +
Preference number: 5 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSKAPPL*GQRMQS
Trigger: GGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCTT...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGCTGCTCAGCGTTTCTTaGGGACTGCAGATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKLLSVS*GLQMGV
Trigger: CACTCCCATCTGCAGTCCCAAAGAAACGCTGAGCAG...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTTCTGGGATGAGGATGTaGTCCACGTCTTCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSSGMRM*STSSQE
Trigger: CTCCTGGGAAGACGTGGACAACATCCTCATCCCAGA...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR CAA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGTCTGGGATGAGGATGTaGTCCACGTCTTCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQESGMRM*STSSQE
Trigger: CTCCTGGGAAGACGTGGACAACATCCTCATCCCAGA...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp AATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATAGCTGGCAGCTCCCCATaGGATACTGTCTTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: NQRHCVATQWRTPVMETIAGSSP*DTVLLS
Trigger: ACTCAACAAGACAGTATCCAATGGGGAGCTGCCAGC...TATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
CDS-3UTR CAA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCAACCTGCTTGGAGGTTaGCTATCATTAATGGGTTTC +
Preference number: 5 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFNLLGG*LSLMGF
Trigger: GAAACCCATTAATGATAGCAAACCTCCAAGCAGGTT...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCTTTTCCTTGTTACTATaGCATTCGGTGATATCCTGG +
Preference number: 5 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFFSLLL*HSVISW
Trigger: CCAGGATATCACCGAATGCAATAGTAACAAGGAAAA...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTGTAAAGATGGTGCCATaGAGGCTGGTTTCGCGCATG +
Preference number: 5 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSVKMVP*RLVSRM
Trigger: CATGCGCGAAACCAGCCTCAATGGCACCATCTTTAC...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp ACATTAAAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGGTAAAGATGGTGCCATaGAGGCTGGTTTCGCGCATG +
Preference number: 5 (lower is better)
Translates to: TLKKKTSVVTVSVSLAQEVKMVP*RLVSRM
Trigger: CATGCGCGAAACCAGCCTCAATGGCACCATCTTTAC...CTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTTTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp GTTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGTGCTTCAAACTCATCTaGCTTTTCTTGGGCACTCCC +
Preference number: 5 (lower is better)
Translates to: VSTSNWFFSEISPEGPWVCFKLI*LFLGTP
Trigger: GGGAGTGCCCAAGAAAAGCAAGATGAGTTTGAAGCA...CACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGATCCAGCATCTTGAGCTaGTCCACGGTGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRSSILS*STVSST
Trigger: TGTGGAAGACACCGTGGACAAGCTCAAGATGCTGGA...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTATGCATTCCCTGGAGTaGGGAAGTGGGAGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSMHSLE*GSGSSR
Trigger: TCTGCTACTCCCACTTCCCAACTCCAGGGAATGCAT...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp TCTCCTAAGCTGGGCCCAAGCCCCACAGCTGTTTCTACTTCTAACTGGTTCTTCCAAATGTATAAGAAGTaGTGGTGGTTGGTTGGTTGT +
Preference number: 5 (lower is better)
Translates to: SPKLGPSPTAVSTSNWFFQMYKK*WWLVGC
Trigger: ACAACCAACCAACCACCACAACTTCTTATACATTTG...GAAGAACCAGTTAGAAGTAGAAACAGCTGTGGGGCTTGGGCCCAGCTTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCATCTGGGATGAGGATGTaGTCCACGTCTTCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSSGMRM*STSSQE
Trigger: CTCCTGGGAAGACGTGGACAACATCCTCATCCCAGA...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS CCA 90 bp GTACAGGTGGGACTCCAGCTTCCGCCTCATAGTAGAAAAATCCATTaGCTTGGATATGAATTCCAGGTAATCTGGAACCTCACTCAAGTT +
Preference number: 5 (lower is better)
Translates to: VQVGLQLPPHSRKIH*LGYEFQVIWNLTQV
Trigger: AACTTGAGTGAGGTTCCAGATTACCTGGAATTCATATCCAAGCCAATGGATTTTTCTACTATGAGGCGGAAGCTGGAGTCCCACCTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCTCCTTCTTTTTGCCCTaGGATGAGGGTTTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: REEVPRSYNTGLDKGHRVSFFLP*DEGFLD
Trigger: GTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGGA...GACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATCAGGATTCCTTCTTTTaGCCCTTGGATGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYQDSFF*PLDEGF
Trigger: GAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCTG...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AAATCAACGACACTGTGTGGCCACACAATGGAGGACTCCAGTAATGGAAACTATTGCTTCAAACTCATCTaGCTTTTCTTGGGCACTCCC +
Preference number: 5 (lower is better)
Translates to: KSTTLCGHTMEDSSNGNYCFKLI*LFLGTP
Trigger: GGGAGTGCCCAAGAAAAGCAAGATGAGTTTGAAGCA...ATAGTTTCCATTACTGGAGTCCTCCATTGTGTGGCCACACAGTGTCGTTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp TGGAGAGTGAAGCTTAAGACTGCAATTGCAGAAAAAGTCCATGAGGAGAGAAGATTGACCTGCTCTCGTTaGAGCTTCTCTCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: WRVKLKTAIAEKVHEERRLTCSR*SFSLFR
Trigger: TCGGAAGAGAGAGAAGCTCAAACGAGAGCAGGTCAA...TCTTCTCTCCTCATGGACTTTTTCTGCAATTGCAGTCTTAAGCTTCACTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTTGCAGAGCTGGGAAGTaGTGTCAACAGCTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSCRAGK*CQQLKG
Trigger: TCCCTTTAGCTGTTGACACAACTTCCCAGCTCTGCA...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGGAAAGTTGTGTTGGTTaGTCAGTCAGCATTCCCCAT +
Preference number: 5 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWESCVG*SVSIPH
Trigger: ATGGGGAATGCTGACTGACAAACCAACACAACTTTC...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGAGTCTGTTGATGCCATaGTCACTGAGCAAGCGTTGC +
Preference number: 5 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKSLLMP*SLSKRC
Trigger: GCAACGCTTGCTCAGTGACAATGGCATCAACAGACT...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS-3UTR CAA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGTGCTTCAAACTCATCTaGCTTTTCTTGGGCACTCCC +
Preference number: 5 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKCFKLI*LFLGTP
Trigger: GGGAGTGCCCAAGAAAAGCAAGATGAGTTTGAAGCA...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS-3UTR CAA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTTGCTTCAAACTCATCTaGCTTTTCTTGGGCACTCCC +
Preference number: 5 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSCFKLI*LFLGTP
Trigger: GGGAGTGCCCAAGAAAAGCAAGATGAGTTTGAAGCA...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCAGTCCTCAACAGAACATaGAATGGCATCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSVLNRT*NGISSS
Trigger: GCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGAC...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCACAGAGTCCATTGGATACTGTCTaGTTGAGTGATGGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: KRGSPKILQHRFRQRSQSPLDTV*LSDGGC
Trigger: ACAGCCACCATCACTCAACAAGACAGTATCCAATGG...ACTCTGTGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357641.10
ENST00000441123.1
CDS-3UTR CAA 90 bp TTTCTACTTCTAACTGGTTCTTCAGTGAAATATCCCCTGAGGGACCTTGGGTGGCAAATGTATAAGAAGTaGTGGTGGTTGGTTGGTTGT +
Preference number: 5 (lower is better)
Translates to: FLLLTGSSVKYPLRDLGWQMYKK*WWLVGC
Trigger: ACAACCAACCAACCACCACAACTTCTTATACATTTG...CCACCCAAGGTCCCTCAGGGGATATTTCACTGAAGAACCAGTTAGAAGTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp CATAGAAAGAGAGGAAGTCCCAAGATCTTACAACACAGGTTTAGACAAAGGTCAGAAAGTTGTGTTGGTTaGTCAGTCAGCATTCCCCAT +
Preference number: 5 (lower is better)
Translates to: HRKRGSPKILQHRFRQRSESCVG*SVSIPH
Trigger: ATGGGGAATGCTGACTGACAAACCAACACAACTTTC...TGACCTTTGTCTAAACCTGTGTTGTAAGATCTTGGGACTTCCTCTCTTTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000449261.6
ENST00000534694.5
CDS-3UTR CAA 90 bp AAGAAAAAGACCAGTGTGGTGACGGTTTCTGTCAGTTTGGCACAAGAGAAAAAGAACCTGCTTGGAGGTTaGCTATCATTAATGGGTTTC +
Preference number: 5 (lower is better)
Translates to: KKKTSVVTVSVSLAQEKKNLLGG*LSLMGF
Trigger: GAAACCCATTAATGATAGCAAACCTCCAAGCAGGTT...CTTTTTCTCTTGTGCCAAACTGACAGAAACCGTCACCACACTGGTCTTTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357641.10
ENST00000441123.1
ENST00000441730.2
ENST00000532330.5
ENST00000534400.5
CDS TCA 72 bp GGGCATATGTCAGGGTCTCCCGGGTGGGTGAGCACTTaGGACTGTAGGGGGACGGGGAACGCCGGCCCTCGG +
Preference number: 6 (lower is better)
Translates to: GHMSGSPGWVST*DCRGTGNAGPR
Trigger: CCGAGGGCCGGCGTTCCCCGTCCCCCTACAGTCTCAAGTGCTCACCCACCCGGGAGACCCTGACATATGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000446974.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS TCA 72 bp CTGGGCCTGGGCATATGTCAGGGTCTCCCGGGTGGGTaGGCACTTGAGACTGTAGGGGGACGGGGAACGCCG +
Preference number: 6 (lower is better)
Translates to: LGLGICQGLPGG*ALETVGGRGTP
Trigger: CGGCGTTCCCCGTCCCCCTACAGTCTCAAGTGCTCACCCACCCGGGAGACCCTGACATATGCCCAGGCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000446974.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CCA 72 bp GGAGTCGCCCTTCCTCCTAGCAGTGGCCGCACCTGGTaGCGAGTGGGCCTCACAGTAGGCAGTCTTGCGCAC +
Preference number: 6 (lower is better)
Translates to: GVALPPSSGRTW*RVGLTVGSLAH
Trigger: GTGCGCAAGACTGCCTACTGTGAGGCCCACTCGCCACCAGGTGCGGCCACTGCTAGGAGGAAGGGCGACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CCA 72 bp GCACTCGAGACAGGGCTGGCTTCCCACGGCTGCGTTTaGGGGGCGTCAGACCACTGCAAGCTTCAAATGCCA +
Preference number: 6 (lower is better)
Translates to: ALETGLASHGCV*GASDHCKLQMP
Trigger: TGGCATTTGAAGCTTGCAGTGGTCTGACGCCCCCCAAACGCAGCCGTGGGAAGCCAGCCCTGTCTCGAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
CDS CAA 90 bp TGGGCCCAGTGCCCATCACTGGTCTGTTTGAAGGCGCCACCCTTATaGGGGCAAAGGATGCAATCCACAGGCCGGGAGGGAGACTGCAGG +
Preference number: 6 (lower is better)
Translates to: WAQCPSLVCLKAPPL*GQRMQSTGREGDCR
Trigger: CCTGCAGTCTCCCTCCCGGCCTGTGGATTGCATCCTTTGCCCCAATAAGGGTGGCGCCTTCAAACAGACCAGTGATGGGCACTGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS TCA 72 bp GCACCTCTGGGGACAAATGGGCCCGGTTCTCTGGGATaGGGATGTTGTCCACTGCCAGGGAGAAGGGAGGAC +
Preference number: 6 (lower is better)
Translates to: APLGTNGPGSLG*GCCPLPGRRED
Trigger: GTCCTCCCTTCTCCCTGGCAGTGGACAACATCCTCATCCCAGAGAACCGGGCCCATTTGTCCCCAGAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532538.1
CDS CCA 72 bp CGTCCATCAATGTCTACCTCGACAATCCGCTGGGCCTaGGCATATGTCAGGGTCTCCCGGGTGGGTGAGCAC +
Preference number: 6 (lower is better)
Translates to: RPSMSTSTIRWA*AYVRVSRVGEH
Trigger: GTGCTCACCCACCCGGGAGACCCTGACATATGCCCAGGCCCAGCGGATTGTCGAGGTAGACATTGATGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000446974.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CCA 72 bp TGCAGGCGTCCATCAATGTCTACCTCGACAATCCGCTaGGCCTGGGCATATGTCAGGGTCTCCCGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: CRRPSMSTSTIR*AWAYVRVSRVG
Trigger: ACCCACCCGGGAGACCCTGACATATGCCCAGGCCCAGCGGATTGTCGAGGTAGACATTGATGGACGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000446974.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CCA 72 bp CAGCTGCACCTCTGGGGACAAATGGGCCCGGTTCTCTaGGATGAGGATGTTGTCCACTGCCAGGGAGAAGGG +
Preference number: 6 (lower is better)
Translates to: QLHLWGQMGPVL*DEDVVHCQGEG
Trigger: CCCTTCTCCCTGGCAGTGGACAACATCCTCATCCCAGAGAACCGGGCCCATTTGTCCCCAGAGGTGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532538.1
CDS CCA 72 bp TCCAGCAGCTCCTTCAGCTGCACCTCTGGGGACAAATaGGCCCGGTTCTCTGGGATGAGGATGTTGTCCACT +
Preference number: 6 (lower is better)
Translates to: SSSSFSCTSGDK*ARFSGMRMLST
Trigger: AGTGGACAACATCCTCATCCCAGAGAACCGGGCCCATTTGTCCCCAGAGGTGCAGCTGAAGGAGCTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532538.1
CDS TCA 72 bp CATCCAGGCACACACAGCAGAAAGCGTCTTCATCGATaGGTGACTGTTGGGCCCCACTGCTGCGACTCTCCA +
Preference number: 6 (lower is better)
Translates to: HPGTHSRKRLHR*VTVGPHCCDSP
Trigger: TGGAGAGTCGCAGCAGTGGGGCCCAACAGTCACTCATCGATGAAGACGCTTTCTGCTGTGTGTGCCTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS GCA 72 bp TCATCCTGCTCTCGCTGCTCAGCGTTTCTTTGGGACTaGAGATGGGAGTGCAAGCGCCGGATAAGAGGGACA +
Preference number: 6 (lower is better)
Translates to: SSCSRCSAFLWD*RWECKRRIRGT
Trigger: TGTCCCTCTTATCCGGCGCTTGCACTCCCATCTGCAGTCCCAAAGAAACGCTGAGCAGCGAGAGCAGGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000527657.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CCA 72 bp CTTCTGGCTGGATGCCTGAGTCCACCATACGGAAGCTaGGCTGTGGGAGGTGGAAGGAAGTACCAGATGCAT +
Preference number: 6 (lower is better)
Translates to: LLAGCLSPPYGS*AVGGGRKYQMH
Trigger: ATGCATCTGGTACTTCCTTCCACCTCCCACAGCCCAGCTTCCGTATGGTGGACTCAGGCATCCAGCCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CCA 72 bp TGCTCTCGCTGCTCAGCGTTTCTTTGGGACTGCAGATaGGAGTGCAAGCGCCGGATAAGAGGGACACCATTC +
Preference number: 6 (lower is better)
Translates to: CSRCSAFLWDCR*ECKRRIRGTPF
Trigger: GAATGGTGTCCCTCTTATCCGGCGCTTGCACTCCCATCTGCAGTCCCAAAGAAACGCTGAGCAGCGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000527657.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS GCA 72 bp CCGGAGCTTCTGCCAATACTTCAGCTCCTCCTTCACTaGACTTGTCTTCTCATCCTGCTCTCGCTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: PELLPILQLLLH*TCLLILLSLLS
Trigger: GCTGAGCAGCGAGAGCAGGATGAGAAGACAAGTGCAGTGAAGGAGGAGCTGAAGTATTGGCAGAAGCTCCGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS GCA 72 bp TACTCAGGAGACAAGGAGGACCCCAGCCAAGGCTCCTaGTCCTTTAAGGGGGCACCTCTTCCAGAAGAATCT +
Preference number: 6 (lower is better)
Translates to: YSGDKEDPSQGS*SFKGAPLPEES
Trigger: AGATTCTTCTGGAAGAGGTGCCCCCTTAAAGGAGCAGGAGCCTTGGCTGGGGTCCTCCTTGTCTCCTGAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454960.1
CDS CAA 72 bp TGTCTTCTCATCCTGCTCTCGCTGCTCAGCGTTTCTTaGGGACTGCAGATGGGAGTGCAAGCGCCGGATAAG +
Preference number: 6 (lower is better)
Translates to: CLLILLSLLSVS*GLQMGVQAPDK
Trigger: CTTATCCGGCGCTTGCACTCCCATCTGCAGTCCCAAAGAAACGCTGAGCAGCGAGAGCAGGATGAGAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000527657.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CAA 72 bp TCCTGCAGCAGGTCCAGTGTTGTCCTCAACAGAACATaGAATGGCATCAGCTCCAGCTCCATGGCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: SCSRSSVVLNRT*NGISSSSMAAC
Trigger: GCAGGCTGCCATGGAGCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGACAACACTGGACCTGCTGCAGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CAA 90 bp CCTGCTTCCTCTGGCTCCTTCTTGATCTTCTGCTTCAAACTCATCTaGCTTTTCTTGGGCACTCCCTTGAGGGAGCCACTCACCCCGCCT +
Preference number: 6 (lower is better)
Translates to: PASSGSFLIFCFKLI*LFLGTPLREPLTPP
Trigger: AGGCGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGAAAAGCAAGATGAGTTTGAAGCAGAAGATCAAGAAGGAGCCAGAGGAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS GCA 72 bp CTGGGCTGTGGGAGGTGGAAGGAAGTACCAGATGCATaGTTGGAGCAGGATTCCTTCTTTTTGCCCTTGGAT +
Preference number: 6 (lower is better)
Translates to: LGCGRWKEVPDA*LEQDSFFLPLD
Trigger: ATCCAAGGGCAAAAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTACTTCCTTCCACCTCCCACAGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CCA 72 bp ACACAGCAGAAAGCGTCTTCATCGATGAGTGACTGTTaGGCCCCACTGCTGCGACTCTCCAAGTATGACTCT +
Preference number: 6 (lower is better)
Translates to: TQQKASSSMSDC*APLLRLSKYDS
Trigger: AGAGTCATACTTGGAGAGTCGCAGCAGTGGGGCCCAACAGTCACTCATCGATGAAGACGCTTTCTGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS TCA 72 bp ATGCTTGGAGCAGGATTCCTTCTTTTTGCCCTTGGATaGGGGTTTCTTGGACTTGCCAGGGAACTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: MLGAGFLLFALG*GFLGLARELRL
Trigger: CAGCCTCAGTTCCCTGGCAAGTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCTGCTCCAAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS TCA 72 bp GCTTCTGCCTGCAAGCTTCAAATGCCAGTCCACCACTaGGACCCAAACTACATTCAGAGTCAGACCCGCTTT +
Preference number: 6 (lower is better)
Translates to: ASACKLQMPVHH*DPNYIQSQTRF
Trigger: AAAGCGGGTCTGACTCTGAATGTAGTTTGGGTCTCAGTGGTGGACTGGCATTTGAAGCTTGCAGGCAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441730.2
CDS GCA 72 bp TTTCTCAAGCCGGTCTACCAGCAGCTCAAAGGTATCTaGAGACACCAAACTGTGCCCATCTACTCGCCGTTT +
Preference number: 6 (lower is better)
Translates to: FLKPVYQQLKGI*RHQTVPIYSPF
Trigger: AAACGGCGAGTAGATGGGCACAGTTTGGTGTCTGCAGATACCTTTGAGCTGCTGGTAGACCGGCTTGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS GCA 72 bp AACCTCACTCAAGTTGACTGGTTCTGCGAAGATGTGTaGAGGATCCTTCTCCTGCAGCAGGTCCAGTGTTGT +
Preference number: 6 (lower is better)
Translates to: NLTQVDWFCEDV*RILLLQQVQCC
Trigger: ACAACACTGGACCTGCTGCAGGAGAAGGATCCTGCACACATCTTCGCAGAACCAGTCAACTTGAGTGAGGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS GCA 72 bp CAGGTAATCTGGAACCTCACTCAAGTTGACTGGTTCTaGGAAGATGTGTGCAGGATCCTTCTCCTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: QVIWNLTQVDWF*EDVCRILLLQQ
Trigger: CTGCTGCAGGAGAAGGATCCTGCACACATCTTCGCAGAACCAGTCAACTTGAGTGAGGTTCCAGATTACCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
ENST00000534694.5
CDS CAA 72 bp GTACCAGATGCATGCTTGGAGCAGGATTCCTTCTTTTaGCCCTTGGATGAGGGTTTCTTGGACTTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: VPDACLEQDSFF*PLDEGFLDLPG
Trigger: CCCTGGCAAGTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCTGCTCCAAGCATGCATCTGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS CAA 72 bp TTCTTGATCTTCTGCTTCAAACTCATCTTGCTTTTCTaGGGCACTCCCTTGAGGGAGCCACTCACCCCGCCT +
Preference number: 6 (lower is better)
Translates to: FLIFCFKLILLF*GTPLREPLTPP
Trigger: AGGCGGGGTGAGTGGCTCCCTCAAGGGAGTGCCCAAGAAAAGCAAGATGAGTTTGAAGCAGAAGATCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS TCA 72 bp TCAGACCACTGCAAGCTTCAAATGCCAGTCCACCACTaGGACCCAAACTACATTCAGAGTCAGACCCGCTTT +
Preference number: 6 (lower is better)
Translates to: SDHCKLQMPVHH*DPNYIQSQTRF
Trigger: AAAGCGGGTCTGACTCTGAATGTAGTTTGGGTCTCAGTGGTGGACTGGCATTTGAAGCTTGCAGTGGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000449261.6
ENST00000534400.5
CDS TCA 72 bp AGATCTTGTTCAACCTTGAGTAGAGGCACACGGAAGTaGAAGACAAGGTCAGTGGGCAGCCCAGATTACAGC +
Preference number: 6 (lower is better)
Translates to: RSCSTLSRGTRK*KTRSVGSPDYS
Trigger: GCTGTAATCTGGGCTGCCCACTGACCTTGTCTTTCACTTCCGTGTGCCTCTACTCAAGGTTGAACAAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527657.1
CDS GCA 72 bp ACCAGCAGCTCAAAGGTATCTGCAGACACCAAACTGTaGCCATCTACTCGCCGTTTTTCATTCACCATGTCC +
Preference number: 6 (lower is better)
Translates to: TSSSKVSADTKL*PSTRRFSFTMS
Trigger: GGACATGGTGAATGAAAAACGGCGAGTAGATGGGCACAGTTTGGTGTCTGCAGATACCTTTGAGCTGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS GCA 72 bp AAGACAAGGTCAGTGGGCAGCCCAGATTACAGCCTGTaGATCCTATCCAGACCTGGTTCATTTCTGAACCTT +
Preference number: 6 (lower is better)
Translates to: KTRSVGSPDYSL*ILSRPGSFLNL
Trigger: AAGGTTCAGAAATGAACCAGGTCTGGATAGGATGCACAGGCTGTAATCTGGGCTGCCCACTGACCTTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527657.1
CDS CCA 72 bp ATGCATGCTTGGAGCAGGATTCCTTCTTTTTGCCCTTaGATGAGGGTTTCTTGGACTTGCCAGGGAACTGAG +
Preference number: 6 (lower is better)
Translates to: MHAWSRIPSFCP*MRVSWTCQGTE
Trigger: CTCAGTTCCCTGGCAAGTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCTGCTCCAAGCATGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS GCA 72 bp CCTTCTTTTTGCCCTTGGATGAGGGTTTCTTGGACTTaGCAGGGAACTGAGGCTGTTCACTGTTTTCCTTGT +
Preference number: 6 (lower is better)
Translates to: PSFCPWMRVSWT*QGTEAVHCFPC
Trigger: ACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGGCAAGTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS TCA 72 bp CTGAAAGGAGAGACCACTACAGATCTTGTTCAACCTTaGGTAGAGGCACACGGAAGTGAAAGACAAGGTCAG +
Preference number: 6 (lower is better)
Translates to: LKGETTTDLVQP*VEAHGSERQGQ
Trigger: CTGACCTTGTCTTTCACTTCCGTGTGCCTCTACTCAAGGTTGAACAAGATCTGTAGTGGTCTCTCCTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527657.1
CDS GCA 72 bp AAGAATGAGGAGCTTCTGCAATTAGACTGTATCCCCTaGACCTCACACAAGATACTCAGGAGACAAGGAGGA +
Preference number: 6 (lower is better)
Translates to: KNEELLQLDCIP*TSHKILRRQGG
Trigger: TCCTCCTTGTCTCCTGAGTATCTTGTGTGAGGTGCAGGGGATACAGTCTAATTGCAGAAGCTCCTCATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454960.1
CDS CCA 72 bp AGGATTCCTTCTTTTTGCCCTTGGATGAGGGTTTCTTaGACTTGCCAGGGAACTGAGGCTGTTCACTGTTTT +
Preference number: 6 (lower is better)
Translates to: RIPSFCPWMRVS*TCQGTEAVHCF
Trigger: AAAACAGTGAACAGCCTCAGTTCCCTGGCAAGTCCAAGAAACCCTCATCCAAGGGCAAAAAGAAGGAATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339717.11
ENST00000357641.10
ENST00000441123.1
ENST00000449261.6
ENST00000454960.1
ENST00000532330.5
ENST00000534400.5
ENST00000534694.5
CDS TCA 72 bp AAAAGGACAGTAAAGTTAAGCAGCTCAGATTCAGCATaGGTTATTTCATTTGCTTTTCCACCTCTTGCCTTG +
Preference number: 6 (lower is better)
Translates to: KRTVKLSSSDSA*VISFAFPPLAL
Trigger: CAAGGCAAGAGGTGGAAAAGCAAATGAAATAACTCATGCTGAATCTGAGCTGCTTAACTTTACTGTCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527657.1
CDS CAA 72 bp AATAAAATGGCCAAATACCTCACCTCAGAGAAAGGCTaGAAAAGGACAGTAAAGTTAAGCAGCTCAGATTCA +
Preference number: 6 (lower is better)
Translates to: NKMAKYLTSEKG*KRTVKLSSSDS
Trigger: TGAATCTGAGCTGCTTAACTTTACTGTCCTTTTCAAGCCTTTCTCTGAGGTGAGGTATTTGGCCATTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527657.1