RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRPF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000156983

Ensembl transcript IDs: ENST00000383829.7, ENST00000420291.3, ENST00000424362.6, ENST00000424362.7, ENST00000426583.2, ENST00000433861.6, ENST00000457855.1, ENST00000457855.2, ENST00000497565.3, ENST00000672126.1, ENST00000672126.2, ENST00000672515.2, ENST00000673551.1, ENST00000673551.2, ENST00000682208.1, ENST00000682980.1, ENST00000683423.1, ENST00000683639.1, ENST00000683743.1, ENST00000683986.1, ENST00000684199.1, ENST00000684206.1, ENST00000684223.1, ENST00000684250.1, ENST00000684333.1, ENST00000684573.1, ENST00000684608.1

Found 595 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCGAGGGGCCATGCCGCTCAGGGCCATCACGTCCCGTCTCTCGCTaGTGGGCAAGCTTCCGCCGCAGTGCCGTCATCTCTTTCTTGATC +
Preference number: 1 (lower is better)
Translates to: LEGPCRSGPSRPVSR*WASFRRSAVISFLI
Trigger: GATCAAGAAAGAGATGACGGCACTGCGGCGGAAGCTTGCCCATCAGCGAGAGACGGGACGTGATGGCCCTGAGCGGCATGGCCCCTCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 90 bp GGCCCAGACTCTTCCTTACCATGCTGTGGCCCACGCCGCGGCCAGTaGCCACGGAGTAGGCCTCATTCTCAGTGCCTGAGGTATCCTCAC +
Preference number: 1 (lower is better)
Translates to: GPDSSLPCCGPRRGQ*PRSRPHSQCLRYPH
Trigger: GTGAGGATACCTCAGGCACTGAGAATGAGGCCTACTCCGTGGGCACTGGCCGCGGCGTGGGCCACAGCATGGTAAGGAAGAGTCTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 90 bp CCCGAGAGAAGGAGGGTTTGCCCCGGCCTTGTTTTGAGGGCGTTGTaGTGGTCCGGTCTGAAGCAGCGCTGCTACTGCTACTGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: PERRRVCPGLVLRAL*WSGLKQRCYCYCCW
Trigger: CCAGCAGCAGTAGCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCTTCTCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 90 bp TTGCTTGTCTCCTGGCTGCTGCTCTCCTCTGCCGCACTATCTGTCTaGCCATCCTTGTCACAGGCTGCCGGGTGGGGTGTCAGACTACCC +
Preference number: 1 (lower is better)
Translates to: LLVSWLLLSSAALSV*PSLSQAAGWGVRLP
Trigger: GGGTAGTCTGACACCCCACCCGGCAGCCTGTGACAAGGATGGGCAGACAGATAGTGCGGCAGAGGAGAGCAGCAGCCAGGAGACAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 90 bp CCTCACTGCTGTCCTCTGGGAAAGTGCCCCGAGAGAAGGAGGGTTTaGCCCGGCCTTGTTTTGAGGGCGTTGTGCTGGTCCGGTCTGAAG +
Preference number: 1 (lower is better)
Translates to: PHCCPLGKCPERRRV*PGLVLRALCWSGLK
Trigger: CTTCAGACCGGACCAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCTTCTCTCGGGGCACTTTCCCAGAGGACAGCAGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR TCA 90 bp CCGCCGCAGTGCCGTCATCTCTTTCTTGATCATCTTTGCACGCCGTaGGCGGCCCACACTCTGCTTGCTGGCATTCACTTCGTCCAGCCG +
Preference number: 1 (lower is better)
Translates to: PPQCRHLFLDHLCTP*AAHTLLAGIHFVQP
Trigger: CGGCTGGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCGCTCACGGCGTGCAAAGATGATCAAGAAAGAGATGACGGCACTGCGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR TCA 90 bp CTCGCTGATGGGCAAGCTTCCGCCGCAGTGCCGTCATCTCTTTCTTaGTCATCTTTGCACGCCGTGAGCGGCCCACACTCTGCTTGCTGG +
Preference number: 1 (lower is better)
Translates to: LADGQASAAVPSSLS*SSLHAVSGPHSACW
Trigger: CCAGCAAGCAGAGTGTGGGCCGCTCACGGCGTGCAAAGATGATCAAGAAAGAGATGACGGCACTGCGGCGGAAGCTTGCCCATCAGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR CCA 90 bp GAGAGAAGGAGGGTTTGCCCCGGCCTTGTTTTGAGGGCGTTGTGCTaGTCCGGTCTGAAGCAGCGCTGCTACTGCTACTGCTGCTGGACT +
Preference number: 1 (lower is better)
Translates to: ERRRVCPGLVLRALC*SGLKQRCYCYCCWT
Trigger: AGTCCAGCAGCAGTAGCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCTTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 90 bp TCCAGCCGCTCCAGAAGCAGCTTTAGCTGTTCTTCCACTGGCAGGTaGTTCTGGTTCTCCAGCAAGACCAGCCGCTCTTCCTCGGCTGCA +
Preference number: 1 (lower is better)
Translates to: SSRSRSSFSCSSTGR*FWFSSKTSRSSSAA
Trigger: TGCAGCCGAGGAAGAGCGGCTGGTCTTGCTGGAGAACCAGAAGCACCTGCCAGTGGAAGAACAGCTAAAGCTGCTTCTGGAGCGGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR GCA 90 bp GGTTGGGCTGTGTTGAGCAGTATCAATCACTATCGCTGGTCTCACTaGTCTGCTCGCCTTGCACCTTGCTGCGGTGCTGCAGAGCCCTGT +
Preference number: 1 (lower is better)
Translates to: GWAVLSSINHYRWSH*SARLAPCCGAAEPC
Trigger: ACAGGGCTCTGCAGCACCGCAGCAAGGTGCAAGGCGAGCAGAGCAGTGAGACCAGCGATAGTGATTGATACTGCTCAACACAGCCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 90 bp TCCAGCCGCTCCAGAAGCAGCTTTAGCTGTTCTTCCACTGGCAGGTaGTTCTGGTTCTCCAGCAAGACCAGCCGCTCTTCCTCGGCATCT +
Preference number: 1 (lower is better)
Translates to: SSRSRSSFSCSSTGR*FWFSSKTSRSSSAS
Trigger: AGATGCCGAGGAAGAGCGGCTGGTCTTGCTGGAGAACCAGAAGCACCTGCCAGTGGAAGAACAGCTAAAGCTGCTTCTGGAGCGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR GCA 90 bp CAGCTGTCTTCGGGTTCTTTTTGGAGAACAGAACTGAGGTTCTCCTaGCCACCTCATGTGCGGGGGTTGAGGACATGTTGGGACCCAGGC +
Preference number: 1 (lower is better)
Translates to: QLSSGSFWRTELRFS*PPHVRGLRTCWDPG
Trigger: GCCTGGGTCCCAACATGTCCTCAACCCCCGCACATGAGGTGGGCAGGAGAACCTCAGTTCTGTTCTCCAAAAAGAACCCGAAGACAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR CCA 90 bp GGCACTATAGGTTGGGCTGTGTTGAGCAGTATCAATCACTATCGCTaGTCTCACTGCTCTGCTCGCCTTGCACCTTGCTGCGGTGCTGCA +
Preference number: 1 (lower is better)
Translates to: GTIGWAVLSSINHYR*SHCSARLAPCCGAA
Trigger: TGCAGCACCGCAGCAAGGTGCAAGGCGAGCAGAGCAGTGAGACCAGCGATAGTGATTGATACTGCTCAACACAGCCCAACCTATAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 90 bp ATCTCTTTCTTGATCATCTTTGCACGCCGTGAGCGGCCCACACTCTaGTTGCTGGCATTCACTTCGTCCAGCCGCTCCAGAAGCAGCTTT +
Preference number: 1 (lower is better)
Translates to: ISFLIIFARRERPTL*LLAFTSSSRSRSSF
Trigger: AAAGCTGCTTCTGGAGCGGCTGGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCGCTCACGGCGTGCAAAGATGATCAAGAAAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR TCA 90 bp TACGGTATACCAAGAAACTCTTCTTCACTGGTTGGTTTCCACCGCTaGAGCCATTGGCTGGTAAGTCTTTGCTTGTCTCCTGGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: YGIPRNSSSLVGFHR*SHWLVSLCLSPGCC
Trigger: GCAGCAGCCAGGAGACAAGCAAAGACTTACCAGCCAATGGCTTCAGCGGTGGAAACCAACCAGTGAAGAAGAGTTTCTTGGTATACCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR CCA 90 bp AGGCTGCAGTCATTACGGTATACCAAGAAACTCTTCTTCACTGGTTaGTTTCCACCGCTGAAGCCATTGGCTGGTAAGTCTTTGCTTGTC +
Preference number: 1 (lower is better)
Translates to: RLQSLRYTKKLFFTG*FPPLKPLAGKSLLV
Trigger: GACAAGCAAAGACTTACCAGCCAATGGCTTCAGCGGTGGAAACCAACCAGTGAAGAAGAGTTTCTTGGTATACCGTAATGACTGCAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR-3UTR TCA 90 bp TGTCAGACTACCCCGGCTCGAGGGGCCATGCCGCTCAGGGCCATCACGTCCCGTCCACCCAGCTTCCCCTaGGACTGGCCCCAAGACCAG +
Preference number: 2 (lower is better)
Translates to: CQTTPARGAMPLRAITSRPPSFP*DWPQDQ
Trigger: CTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGG...ACGGGACGTGATGGCCCTGAGCGGCATGGCCCCTCGAGCCGGGGTAGTCTGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp GGCTCGAGGGGCCATGCCGCTCAGGGCCATCACGTCCCGTCTCTCGCTGATGGGGAGCGGCCCACACTCTaGTTGCTGGCATTCACTTCG +
Preference number: 2 (lower is better)
Translates to: GSRGHAAQGHHVPSLADGERPTL*LLAFTS
Trigger: CGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCGCTC...CCCATCAGCGAGAGACGGGACGTGATGGCCCTGAGCGGCATGGCCCCTCGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp GCCCAGACTCTTCCTTACCATGCTGTGGCCCACGCCGCGGCCAGTGCCCACGGAGAACTGAGGTTCTCCTaGCCACCTCATGTGCGGGGG +
Preference number: 2 (lower is better)
Translates to: AQTLPYHAVAHAAASAHGELRFS*PPHVRG
Trigger: CCCCCGCACATGAGGTGGGCAGGAGAACCTCAGTTC...TCCGTGGGCACTGGCCGCGGCGTGGGCCACAGCATGGTAAGGAAGAGTCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR CCA 90 bp GCCCAGACTCTTCCTTACCATGCTGTGGCCCACGCCGCGGCCAGTGCCCACGGAGCCCCTCTTCCAGGCTaGACAGATGCCCACTCACCT +
Preference number: 2 (lower is better)
Translates to: AQTLPYHAVAHAAASAHGAPLPG*TDAHSP
Trigger: AGGTGAGTGGGCATCTGTCCAGCCTGGAAGAGGGGC...TCCGTGGGCACTGGCCGCGGCGTGGGCCACAGCATGGTAAGGAAGAGTCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR CAA 90 bp TCCTGGCTGCTGCTCTCCTCTGCCGCACTATCTGTCTGCCCATCCTaGTCACAGGCTGCCGGGTGGGGTGTCAGACTACCCCGGCTCGAG +
Preference number: 2 (lower is better)
Translates to: SWLLLSSAALSVCPS*SQAAGWGVRLPRLE
Trigger: CTCGAGCCGGGGTAGTCTGACACCCCACCCGGCAGCCTGTGACAAGGATGGGCAGACAGATAGTGCGGCAGAGGAGAGCAGCAGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp TGTCAGACTACCCCGGCTCGAGGGGCCATGCCGCTCAGGGCCATCACGTCCCGTCCAGAAATGAGTCAGTaGAGAGGCCGGTGCCACTCC +
Preference number: 2 (lower is better)
Translates to: CQTTPARGAMPLRAITSRPEMSQ*RGRCHS
Trigger: GGAGTGGCACCGGCCTCTGCACTGACTCATTTCTGG...ACGGGACGTGATGGCCCTGAGCGGCATGGCCCCTCGAGCCGGGGTAGTCTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp GGCTCGAGGGGCCATGCCGCTCAGGGCCATCACGTCCCGTCTCTCGCTGATGGGGGCCCACACTCTGCTTaGTGGCATTCACTTCGTCCA +
Preference number: 2 (lower is better)
Translates to: GSRGHAAQGHHVPSLADGGPHSA*WHSLRP
Trigger: TGGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCC...CCCATCAGCGAGAGACGGGACGTGATGGCCCTGAGCGGCATGGCCCCTCGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR TCA 90 bp GCTTCCTGGGTCATCTGCTCCCCAAGTTTCAGCACCTCCAGTGGGGGCACAGGGGCTGGACTCAGAGTCTaGGCTGCTCCGGGGAAGGCT +
Preference number: 2 (lower is better)
Translates to: ASWVICSPSFSTSSGGTGAGLRV*AAPGKA
Trigger: AGCCTTCCCCGGAGCAGCTCAGACTCTGAGTCCAGC...CCCTGTGCCCCCACTGGAGGTGCTGAAACTTGGGGAGCAGATGACCCAGGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp CCTCACTGCTGTCCTCTGGGAAAGTGCCCCGAGAGAAGGAGGGTTTGCCCCGGCTGCTTGTCTCCTGGCTaGTGCTCTCCTCTGCCGCAC +
Preference number: 2 (lower is better)
Translates to: PHCCPLGKCPERRRVCPGCLSPG*CSPLPH
Trigger: GTGCGGCAGAGGAGAGCAGCAGCCAGGAGACAAGCA...GCCGGGGCAAACCCTCCTTCTCTCGGGGCACTTTCCCAGAGGACAGCAGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp GCCCAGACTCTTCCTTACCATGCTGTGGCCCACGCCGCGGCCAGTGCCCACGGATGTCCTCTGGGAAAGTaGCCCGAGAGAAGGAGGGTT +
Preference number: 2 (lower is better)
Translates to: AQTLPYHAVAHAAASAHGCPLGK*PERRRV
Trigger: AACCCTCCTTCTCTCGGGGCACTTTCCCAGAGGACA...TCCGTGGGCACTGGCCGCGGCGTGGGCCACAGCATGGTAAGGAAGAGTCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR CAA 90 bp CTGGGAAAGTGCCCCGAGAGAAGGAGGGTTTGCCCCGGCCTTGTTTaGAGGGCGTTGTGCTGGTCCGGTCTGAAGCAGCGCTGCTACTGC +
Preference number: 2 (lower is better)
Translates to: LGKCPERRRVCPGLV*RALCWSGLKQRCYC
Trigger: GCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCTTCTCTCGGGGCACTTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR TCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCCACCCAGCTTCCCCTaGGACTGGCCCCAAGACCAG +
Preference number: 2 (lower is better)
Translates to: ALPLLALNCHWPLECSVQPPSFP*DWPQDQ
Trigger: CTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383829.7
ENST00000424362.6
ENST00000433861.6
ENST00000457855.1
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACCACCCAGCTTCCCCTaGGACTGGCCCCAAGACCAG +
Preference number: 2 (lower is better)
Translates to: WALPLLALNCHWPLECSVPPSFP*DWPQDQ
Trigger: CTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383829.7
ENST00000424362.6
ENST00000433861.6
ENST00000457855.1
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR TCA 90 bp GCCCAGACTCTTCCTTACCATGCTGTGGCCCACGCCGCGGCCAGTGCCCACGGAGTTGGTTTCCACCGCTaGAGCCATTGGCTGGTAAGT +
Preference number: 2 (lower is better)
Translates to: AQTLPYHAVAHAAASAHGVGFHR*SHWLVS
Trigger: ACTTACCAGCCAATGGCTTCAGCGGTGGAAACCAAC...TCCGTGGGCACTGGCCGCGGCGTGGGCCACAGCATGGTAAGGAAGAGTCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp GCCCAGACTCTTCCTTACCATGCTGTGGCCCACGCCGCGGCCAGTGCCCACGGATGCTCCGGGGAAGGCTaGAGTCATTACGGTATACCA +
Preference number: 2 (lower is better)
Translates to: AQTLPYHAVAHAAASAHGCSGEG*SHYGIP
Trigger: TGGTATACCGTAATGACTGCAGCCTTCCCCGGAGCA...TCCGTGGGCACTGGCCGCGGCGTGGGCCACAGCATGGTAAGGAAGAGTCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp GGTCTGAAGCAGCGCTGCTACTGCTACTGCTGCTGGACTCAGAGTCTGAGCTGCTCACAGGCTGCCGGGTaGGGTGTCAGACTACCCCGG +
Preference number: 2 (lower is better)
Translates to: GLKQRCYCYCCWTQSLSCSQAAG*GVRLPR
Trigger: CCGGGGTAGTCTGACACCCCACCCGGCAGCCTGTGA...GCAGCTCAGACTCTGAGTCCAGCAGCAGTAGCAGTAGCAGCGCTGCTTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp GCCCAGACTCTTCCTTACCATGCTGTGGCCCACGCCGCGGCCAGTGCCCACGGAAAGCTTCCGCCGCAGTaGCGTCATCTCTTTCTTGAT +
Preference number: 2 (lower is better)
Translates to: AQTLPYHAVAHAAASAHGKLPPQ*RHLFLD
Trigger: ATCAAGAAAGAGATGACGGCACTGCGGCGGAAGCTT...TCCGTGGGCACTGGCCGCGGCGTGGGCCACAGCATGGTAAGGAAGAGTCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp CCCACCTCATGTGCGGGGGTTGAGGACATGTTGGGACCCAGGCCTTTGCTTGTCGCCCCTCTTCCAGGCTaGACAGATGCCCACTCACCT +
Preference number: 2 (lower is better)
Translates to: PTSCAGVEDMLGPRPLLVAPLPG*TDAHSP
Trigger: AGGTGAGTGGGCATCTGTCCAGCCTGGAAGAGGGGC...GACAAGCAAAGGCCTGGGTCCCAACATGTCCTCAACCCCCGCACATGAGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATTCCTTACCATGCTGTaGCCCACGCCGCGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: WALPLLALNCHWPLECSVFLTML*PTPRPV
Trigger: CACTGGCCGCGGCGTGGGCCACAGCATGGTAAGGAA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp TCTGTGGACTTATCACTGTCGCTGTCTGAGCTCGAACTGGGCCGGGGGCTCCTATTCCTTACCATGCTGTaGCCCACGCCGCGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: SVDLSLSLSELELGRGLLFLTML*PTPRPV
Trigger: CACTGGCCGCGGCGTGGGCCACAGCATGGTAAGGAA...TAGGAGCCCCCGGCCCAGTTCGAGCTCAGACAGCGACAGTGATAAGTCCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR TCA 90 bp GACTCAGAGTCTGAGCTGCTCCGGGGAAGGCTGCAGTCATTACGGTATACCAAGCCACCCAGCTTCCCCTaGGACTGGCCCCAAGACCAG +
Preference number: 2 (lower is better)
Translates to: DSESELLRGRLQSLRYTKPPSFP*DWPQDQ
Trigger: CTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGG...CTTGGTATACCGTAATGACTGCAGCCTTCCCCGGAGCAGCTCAGACTCTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR TCA 90 bp ATGGGCAAGCTTCCGCCGCAGTGCCGTCATCTCTTTCTTGATCATCTTTGCACGCGTCCCGTCTCTCGCTaGTGGGCAAGCTTCCGCCGC +
Preference number: 2 (lower is better)
Translates to: MGKLPPQCRHLFLDHLCTRPVSR*WASFRR
Trigger: GCGGCGGAAGCTTGCCCATCAGCGAGAGACGGGACG...CGTGCAAAGATGATCAAGAAAGAGATGACGGCACTGCGGCGGAAGCTTGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATCCAGGCTGGACAGATaGCCACTCACCTCACGACCG +
Preference number: 2 (lower is better)
Translates to: WALPLLALNCHWPLECSVSRLDR*PLTSRP
Trigger: CGGTCGTGAGGTGAGTGGGCATCTGTCCAGCCTGGA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383829.7
ENST00000424362.6
ENST00000433861.6
ENST00000457855.1
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp TTTGAGGGCGTTGTGCTGGTCCGGTCTGAAGCAGCGCTGCTACTGCTACTGCTGTCCAGGCTGGACAGATaGCCACTCACCTCACGACCG +
Preference number: 2 (lower is better)
Translates to: FEGVVLVRSEAALLLLLLSRLDR*PLTSRP
Trigger: CGGTCGTGAGGTGAGTGGGCATCTGTCCAGCCTGGA...CAGCAGTAGCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGCCCTCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp GGCCCACACTCTGCTTGCTGGCATTCACTTCGTCCAGCCGCTCCAGAAGCAGCTGCTTTTTCTGACCTGTaGGCCCTCCCTCTCCTTGCG +
Preference number: 2 (lower is better)
Translates to: GPHSACWHSLRPAAPEAAAFSDL*ALPLLA
Trigger: CGCAAGGAGAGGGAGGGCCCACAGGTCAGAAAAAGC...AGCTGCTTCTGGAGCGGCTGGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGCCCCTCTTCCAGGCTaGACAGATGCCCACTCACCT +
Preference number: 2 (lower is better)
Translates to: WALPLLALNCHWPLECSVAPLPG*TDAHSP
Trigger: AGGTGAGTGGGCATCTGTCCAGCCTGGAAGAGGGGC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383829.7
ENST00000424362.6
ENST00000433861.6
ENST00000457855.1
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp TCTTCTCCTTGTCTAGGTCCTGGTTCACACCCAGAGGAACCAGCTTGGTCCTGGTCACAGGCTGCCGGGTaGGGTGTCAGACTACCCCGG +
Preference number: 2 (lower is better)
Translates to: SSPCLGPGSHPEEPAWSWSQAAG*GVRLPR
Trigger: CCGGGGTAGTCTGACACCCCACCCGGCAGCCTGTGA...CCAGGACCAAGCTGGTTCCTCTGGGTGTGAACCAGGACCTAGACAAGGAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp CCCGAGAGAAGGAGGGTTTGCCCCGGCCTTGTTTTGAGGGCGTTGTGCTGGTCCTCTTTGCTTGTCTCCTaGCTGCTGCTCTCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: PERRRVCPGLVLRALCWSSLLVS*LLLSSA
Trigger: GGCAGAGGAGAGCAGCAGCCAGGAGACAAGCAAAGA...GGACCAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCTTCTCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR-3UTR CCA 90 bp GCTTCCTGGGTCATCTGCTCCCCAAGTTTCAGCACCTCCAGTGGGGGCACAGGGATGGGAACCCCATGGTaGAACATACCTTCTCGGGGC +
Preference number: 2 (lower is better)
Translates to: ASWVICSPSFSTSSGGTGMGTPW*NIPSRG
Trigger: GCCCCGAGAAGGTATGTTCCACCATGGGGTTCCCAT...CCCTGTGCCCCCACTGGAGGTGCTGAAACTTGGGGAGCAGATGACCCAGGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACTCTGGAGCTTTTTCTaGCCTGTGGGCCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: WALPLLALNCHWPLECSVLWSFF*PVGPPS
Trigger: AGAGGGAGGGCCCACAGGTCAGAAAAAGCTCCAGAG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383829.7
ENST00000424362.6
ENST00000433861.6
ENST00000457855.1
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACCAGAAATGAGTCAGTaGAGAGGCCGGTGCCACTCC +
Preference number: 2 (lower is better)
Translates to: WALPLLALNCHWPLECSVPEMSQ*RGRCHS
Trigger: GGAGTGGCACCGGCCTCTGCACTGACTCATTTCTGG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383829.7
ENST00000424362.6
ENST00000433861.6
ENST00000457855.1
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCCAGAAATGAGTCAGTaGAGAGGCCGGTGCCACTCC +
Preference number: 2 (lower is better)
Translates to: ALPLLALNCHWPLECSVQPEMSQ*RGRCHS
Trigger: GGAGTGGCACCGGCCTCTGCACTGACTCATTTCTGG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383829.7
ENST00000424362.6
ENST00000433861.6
ENST00000457855.1
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp CCCGAGAGAAGGAGGGTTTGCCCCGGCCTTGTTTTGAGGGCGTTGTGCTGGTCCTGGCTGGTAAGTCTTTaGTTGTCTCCTGGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: PERRRVCPGLVLRALCWSWLVSL*LSPGCC
Trigger: GCAGCAGCCAGGAGACAAGCAAAGACTTACCAGCCA...GGACCAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCTTCTCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR-3UTR GCA 90 bp GGTCTGAAGCAGCGCTGCTACTGCTACTGCTGCTGGACTCAGAGTCTGAGCTGCACTCAGAGTCTGAGCTaGTCCGGGGAAGGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: GLKQRCYCYCCWTQSLSCTQSLS*SGEGCS
Trigger: ACTGCAGCCTTCCCCGGAGCAGCTCAGACTCTGAGT...GCAGCTCAGACTCTGAGTCCAGCAGCAGTAGCAGTAGCAGCGCTGCTTCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp CCCGAGAGAAGGAGGGTTTGCCCCGGCCTTGTTTTGAGGGCGTTGTGCTGGTCCCTGAGGTATCCTCACTaGTGTCCTCTGGGAAAGTGC +
Preference number: 2 (lower is better)
Translates to: PERRRVCPGLVLRALCWSLRYPH*CPLGKC
Trigger: GCACTTTCCCAGAGGACAGCAGTGAGGATACCTCAG...GGACCAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCTTCTCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp GCTTCCTGGGTCATCTGCTCCCCAAGTTTCAGCACCTCCAGTGGGGGCACAGGGCGATCTGTACTGACTTaGGGATGTTGGACTTGCGGC +
Preference number: 2 (lower is better)
Translates to: ASWVICSPSFSTSSGGTGRSVLT*GCWTCG
Trigger: GCCGCAAGTCCAACATCCGCAAGTCAGTACAGATCG...CCCTGTGCCCCCACTGGAGGTGCTGAAACTTGGGGAGCAGATGACCCAGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp TGGGCTGTGTTGAGCAGTATCAATCACTATCGCTGGTCTCACTGCTCTGCTCGCGCTCGCCTTGCACCTTaGTGCGGTGCTGCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: WAVLSSINHYRWSHCSARARLAP*CGAAEP
Trigger: GGGCTCTGCAGCACCGCAGCAAGGTGCAAGGCGAGC...GCGAGCAGAGCAGTGAGACCAGCGATAGTGATTGATACTGCTCAACACAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp GGCCCGGCCTCTTGGGCGGTCCAGCTGTCTTCGGGTTCTTTTTGGAGAACAGAAGCTTTTTCTGACCTGTaGGCCCTCCCTCTCCTTGCG +
Preference number: 2 (lower is better)
Translates to: GPASWAVQLSSGSFWRTEAFSDL*ALPLLA
Trigger: CGCAAGGAGAGGGAGGGCCCACAGGTCAGAAAAAGC...TTCTGTTCTCCAAAAAGAACCCGAAGACAGCTGGACCGCCCAAGAGGCCGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR CCA 90 bp GGTCTGAAGCAGCGCTGCTACTGCTACTGCTGCTGGACTCAGAGTCTGAGCTGCCCTTTGCTTGTCTCCTaGCTGCTGCTCTCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: GLKQRCYCYCCWTQSLSCPLLVS*LLLSSA
Trigger: GGCAGAGGAGAGCAGCAGCCAGGAGACAAGCAAAGG...GCAGCTCAGACTCTGAGTCCAGCAGCAGTAGCAGTAGCAGCGCTGCTTCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR TCA 90 bp TCGGGCTTCCTGGGTCATCTGCTCCCCAAGTTTCAGCACCTCCAGTGGGGGCACGATCAGAGCTGGGTATaGTGGATAGCCTCGGCATTT +
Preference number: 2 (lower is better)
Translates to: SGFLGHLLPKFQHLQWGHDQSWV*WIASAF
Trigger: AAATGCCGAGGCTATCCATCATACCCAGCTCTGATC...GTGCCCCCACTGGAGGTGCTGAAACTTGGGGAGCAGATGACCCAGGAAGCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR TCA 90 bp TCTTCTCCTTGTCTAGGTCCTGGTTCACACCCAGAGGAACCAGCTTGGTCCTGGCTACCCCGCTTGCGCTaGCGCAGGGAACTCATGATG +
Preference number: 2 (lower is better)
Translates to: SSPCLGPGSHPEEPAWSWLPRLR*RRELMM
Trigger: CATCATGAGTTCCCTGCGTCAGCGCAAGCGGGGTAG...CCAGGACCAAGCTGGTTCCTCTGGGTGTGAACCAGGACCTAGACAAGGAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACTCCTTGCGCTGAACTaGCATTGGCCCTTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: WALPLLALNCHWPLECSVLLALN*HWPLEC
Trigger: ACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383829.7
ENST00000424362.6
ENST00000433861.6
ENST00000457855.1
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp AGCTGCTCCGGGGAAGGCTGCAGTCATTACGGTATACCAAGAAACTCTTCTTCACGGCTCGAGGGGCCATaGCGCTCAGGGCCATCACGT +
Preference number: 2 (lower is better)
Translates to: SCSGEGCSHYGIPRNSSSRLEGP*RSGPSR
Trigger: ACGTGATGGCCCTGAGCGGCATGGCCCCTCGAGCCG...TGAAGAAGAGTTTCTTGGTATACCGTAATGACTGCAGCCTTCCCCGGAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATTGTCTCCTGGCTGCTaGTCTCCTCTGCCGCACTAT +
Preference number: 2 (lower is better)
Translates to: WALPLLALNCHWPLECSVLSPGC*SPLPHY
Trigger: ATAGTGCGGCAGAGGAGAGCAGCAGCCAGGAGACAA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGCTTCCTGGGTCATCTaGTCCCCAAGTTTCAGCACC +
Preference number: 2 (lower is better)
Translates to: WALPLLALNCHWPLECSVASWVI*SPSFST
Trigger: GGTGCTGAAACTTGGGGAGCAGATGACCCAGGAAGC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp ACTTCGTCCAGCCGCTCCAGAAGCAGCTTTAGCTGTTCTTCCACTGGCAGGTGCACGAAGCCGCACTGCTaGCCGGTAGAAGATGGTGTC +
Preference number: 2 (lower is better)
Translates to: TSSSRSRSSFSCSSTGRCTKPHC*PVEDGV
Trigger: GACACCATCTTCTACCGGGCAGCAGTGCGGCTTCGT...GCACCTGCCAGTGGAAGAACAGCTAAAGCTGCTTCTGGAGCGGCTGGACGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR CCA 90 bp GGCCCACACTCTGCTTGCTGGCATTCACTTCGTCCAGCCGCTCCAGAAGCAGCTGCGCTGAACTGCCATTaGCCCTTGGAGTGTTCTGTA +
Preference number: 2 (lower is better)
Translates to: GPHSACWHSLRPAAPEAAALNCH*PLECSV
Trigger: TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGC...AGCTGCTTCTGGAGCGGCTGGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp GGTCTGAAGCAGCGCTGCTACTGCTACTGCTGCTGGACTCAGAGTCTGAGCTGCGGGTTGAGGACATGTTaGGACCCAGGCCTTTGCTTG +
Preference number: 2 (lower is better)
Translates to: GLKQRCYCYCCWTQSLSCGLRTC*DPGLCL
Trigger: CAAGCAAAGGCCTGGGTCCCAACATGTCCTCAACCC...GCAGCTCAGACTCTGAGTCCAGCAGCAGTAGCAGTAGCAGCGCTGCTTCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR CAA 90 bp ATGTGGAATGGCGGGCACTGCTATCCATTCACCCAGTCTGGCTTCTaGGGGAGCATTCCTGGGGATAGCTTGCCACTGCTCAGCCTAGCT +
Preference number: 2 (lower is better)
Translates to: MWNGGHCYPFTQSGF*GSIPGDSLPLLSLA
Trigger: AGCTAGGCTGAGCAGTGGCAAGCTATCCCCAGGAATGCTCCCCAAGAAGCCAGACTGGGTGAATGGATAGCAGTGCCCGCCATTCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR-3UTR TCA 90 bp TATCGCTGGTCTCACTGCTCTGCTCGCCTTGCACCTTGCTGCGGTGCTGCAGAGGTAGGCGATCTGTACTaGCTTGCGGATGTTGGACTT +
Preference number: 2 (lower is better)
Translates to: YRWSHCSARLAPCCGAAEVGDLY*LADVGL
Trigger: AAGTCCAACATCCGCAAGTCAGTACAGATCGCCTAC...CTCTGCAGCACCGCAGCAAGGTGCAAGGCGAGCAGAGCAGTGAGACCAGCGATA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp ACTTCGTCCAGCCGCTCCAGAAGCAGCTTTAGCTGTTCTTCCACTGGCAGGTGCAGCCTAGCTGCTTTCTaGCTACACTGCCTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: TSSSRSRSSFSCSSTGRCSLAAF*LHCLLP
Trigger: TGGGAGCAGGCAGTGTAGGCAGAAAGCAGCTAGGCT...GCACCTGCCAGTGGAAGAACAGCTAAAGCTGCTTCTGGAGCGGCTGGACGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR-3UTR GCA 90 bp TTTGAGGGCGTTGTGCTGGTCCGGTCTGAAGCAGCGCTGCTACTGCTACTGCTGTGGAATGGCGGGCACTaGTATCCATTCACCCAGTCT +
Preference number: 2 (lower is better)
Translates to: FEGVVLVRSEAALLLLLLWNGGH*YPFTQS
Trigger: AGACTGGGTGAATGGATAGCAGTGCCCGCCATTCCA...CAGCAGTAGCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGCCCTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR-3UTR GCA 90 bp CTCTGCTTGCTGGCATTCACTTCGTCCAGCCGCTCCAGAAGCAGCTTTAGCTGTCTCACGAAGCCGCACTaGTGCCCGGTAGAAGATGGT +
Preference number: 2 (lower is better)
Translates to: LCLLAFTSSSRSRSSFSCLTKPH*CPVEDG
Trigger: ACCATCTTCTACCGGGCAGCAGTGCGGCTTCGTGAG...ACAGCTAAAGCTGCTTCTGGAGCGGCTGGACGAAGTGAATGCCAGCAAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGCGCTGAACTGCCATTaGCCCTTGGAGTGTTCTGTA +
Preference number: 2 (lower is better)
Translates to: WALPLLALNCHWPLECSVALNCH*PLECSV
Trigger: TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383829.7
ENST00000424362.6
ENST00000433861.6
ENST00000457855.1
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp TATCGCTGGTCTCACTGCTCTGCTCGCCTTGCACCTTGCTGCGGTGCTGCAGAGCTGCCCGGTAGAAGATaGTGTCCTTGGCGTTATACT +
Preference number: 2 (lower is better)
Translates to: YRWSHCSARLAPCCGAAELPGRR*CPWRYT
Trigger: AGTATAACGCCAAGGACACCATCTTCTACCGGGCAG...CTCTGCAGCACCGCAGCAAGGTGCAAGGCGAGCAGAGCAGTGAGACCAGCGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR CAA 90 bp TCTTTCTTGATCATCTTTGCACGCCGTGAGCGGCCCACACTCTGCTaGCTGGCATTCACTTCGTCCAGCCGCTCCAGAAGCAGCTTTAGC +
Preference number: 2 (lower is better)
Translates to: SFLIIFARRERPTLC*LAFTSSSRSRSSFS
Trigger: GCTAAAGCTGCTTCTGGAGCGGCTGGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCGCTCACGGCGTGCAAAGATGATCAAGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR TCA 90 bp TTTGAGGGCGTTGTGCTGGTCCGGTCTGAAGCAGCGCTGCTACTGCTACTGCTGCCGTCATCTCTTTCTTaGTCATCTTTGCACGCCGTG +
Preference number: 2 (lower is better)
Translates to: FEGVVLVRSEAALLLLLLPSSLS*SSLHAV
Trigger: CACGGCGTGCAAAGATGATCAAGAAAGAGATGACGG...CAGCAGTAGCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGCCCTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp ATGGGCAAGCTTCCGCCGCAGTGCCGTCATCTCTTTCTTGATCATCTTTGCACGCCAGAAATGAGTCAGTaGAGAGGCCGGTGCCACTCC +
Preference number: 2 (lower is better)
Translates to: MGKLPPQCRHLFLDHLCTPEMSQ*RGRCHS
Trigger: GGAGTGGCACCGGCCTCTGCACTGACTCATTTCTGG...CGTGCAAAGATGATCAAGAAAGAGATGACGGCACTGCGGCGGAAGCTTGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp ACTTCGTCCAGCCGCTCCAGAAGCAGCTTTAGCTGTTCTTCCACTGGCAGGTGCTCTTCCACTGGCAGGTaGTTCTGGTTCTCCAGCAAG +
Preference number: 2 (lower is better)
Translates to: TSSSRSRSSFSCSSTGRCSSTGR*FWFSSK
Trigger: CTTGCTGGAGAACCAGAAGCACCTGCCAGTGGAAGA...GCACCTGCCAGTGGAAGAACAGCTAAAGCTGCTTCTGGAGCGGCTGGACGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp TGGGCTGTGTTGAGCAGTATCAATCACTATCGCTGGTCTCACTGCTCTGCTCGCGAGCGGCCCACACTCTaGTTGCTGGCATTCACTTCG +
Preference number: 2 (lower is better)
Translates to: WAVLSSINHYRWSHCSARERPTL*LLAFTS
Trigger: CGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCGCTC...GCGAGCAGAGCAGTGAGACCAGCGATAGTGATTGATACTGCTCAACACAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp TCTTCTCCTTGTCTAGGTCCTGGTTCACACCCAGAGGAACCAGCTTGGTCCTGGTGTCCTCTGGGAAAGTaGCCCGAGAGAAGGAGGGTT +
Preference number: 2 (lower is better)
Translates to: SSPCLGPGSHPEEPAWSWCPLGK*PERRRV
Trigger: AACCCTCCTTCTCTCGGGGCACTTTCCCAGAGGACA...CCAGGACCAAGCTGGTTCCTCTGGGTGTGAACCAGGACCTAGACAAGGAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp ACTTCGTCCAGCCGCTCCAGAAGCAGCTTTAGCTGTTCTTCCACTGGCAGGTGCGCGCTGAACTGCCATTaGCCCTTGGAGTGTTCTGTA +
Preference number: 2 (lower is better)
Translates to: TSSSRSRSSFSCSSTGRCALNCH*PLECSV
Trigger: TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGC...GCACCTGCCAGTGGAAGAACAGCTAAAGCTGCTTCTGGAGCGGCTGGACGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGAAAGAGAAGGGAAATaGGGACAGCCCCCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: WALPLLALNCHWPLECSVEREGK*GQPPVF
Trigger: AAAGACTGGGGGCTGTCCCCATTTCCCTTCTCTTTC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383829.7
ENST00000424362.6
ENST00000457855.1
3UTR-3UTR CCA 90 bp TCTTCTCCTTGTCTAGGTCCTGGTTCACACCCAGAGGAACCAGCTTGGTCCTGGCCACACTCTGCTTGCTaGCATTCACTTCGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: SSPCLGPGSHPEEPAWSWPHSAC*HSLRPA
Trigger: GGCTGGACGAAGTGAATGCCAGCAAGCAGAGTGTGG...CCAGGACCAAGCTGGTTCCTCTGGGTGTGAACCAGGACCTAGACAAGGAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp ATGGGCAAGCTTCCGCCGCAGTGCCGTCATCTCTTTCTTGATCATCTTTGCACGCTTCAGTGTGGTGTGTaGCCTCATCTCCAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: MGKLPPQCRHLFLDHLCTLQCGV*PHLQPG
Trigger: GCCTGGCTGGAGATGAGGCCACACACCACACTGAAG...CGTGCAAAGATGATCAAGAAAGAGATGACGGCACTGCGGCGGAAGCTTGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR CCA 90 bp TGTTTTGAGGGCGTTGTGCTGGTCCGGTCTGAAGCAGCGCTGCTACTGCTACTGTCGGCATCTTCAGTGTaGTGTGTGGCCTCATCTCCA +
Preference number: 2 (lower is better)
Translates to: CFEGVVLVRSEAALLLLLSASSV*CVASSP
Trigger: TGGAGATGAGGCCACACACCACACTGAAGATGCCGA...CAGTAGCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGCCCTCAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR TCA 90 bp TTTGAGGGCGTTGTGCTGGTCCGGTCTGAAGCAGCGCTGCTACTGCTACTGCTGAGTCCATGGGCTTTTTaGTGTGGTCTAGGTAGTCAG +
Preference number: 2 (lower is better)
Translates to: FEGVVLVRSEAALLLLLLSPWAF*CGLGSQ
Trigger: CTGACTACCTAGACCACATCAAAAAGCCCATGGACT...CAGCAGTAGCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGCCCTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR GCA 90 bp TCTTCTCCTTGTCTAGGTCCTGGTTCACACCCAGAGGAACCAGCTTGGTCCTGGTGCTACTGCTACTGCTaGTGGACTCAGAGTCTGAGC +
Preference number: 2 (lower is better)
Translates to: SSPCLGPGSHPEEPAWSWCYCYC*WTQSLS
Trigger: GCTCAGACTCTGAGTCCAGCAGCAGTAGCAGTAGCA...CCAGGACCAAGCTGGTTCCTCTGGGTGTGAACCAGGACCTAGACAAGGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp TGTTTTGAGGGCGTTGTGCTGGTCCGGTCTGAAGCAGCGCTGCTACTGCTACTGTTAGAGAGAAGAGTCTaGCAGTCAGGACCTAGGGCT +
Preference number: 2 (lower is better)
Translates to: CFEGVVLVRSEAALLLLLLERRV*QSGPRA
Trigger: AGCCCTAGGTCCTGACTGGCAGACTCTTCTCTCTAA...CAGTAGCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGCCCTCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR CCA 90 bp CTCTGCTTGCTGGCATTCACTTCGTCCAGCCGCTCCAGAAGCAGCTTTAGCTGTTCCATTCACCCAGTCTaGCTTCTTGGGGAGCATTCC +
Preference number: 2 (lower is better)
Translates to: LCLLAFTSSSRSRSSFSCSIHPV*LLGEHS
Trigger: GGAATGCTCCCCAAGAAGCCAGACTGGGTGAATGGA...ACAGCTAAAGCTGCTTCTGGAGCGGCTGGACGAAGTGAATGCCAGCAAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR-3UTR CCA 90 bp TGTTTTGAGGGCGTTGTGCTGGTCCGGTCTGAAGCAGCGCTGCTACTGCTACTGCACCAAGATGTGGAATaGCGGGCACTGCTATCCATT +
Preference number: 2 (lower is better)
Translates to: CFEGVVLVRSEAALLLLLHQDVE*RALLSI
Trigger: AATGGATAGCAGTGCCCGCCATTCCACATCTTGGTG...CAGTAGCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGCCCTCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR-3UTR TCA 90 bp GACTCAGAGTCTGAGCTGCTCCGGGGAAGGCTGCAGTCATTACGGTATACCAAGCCGTCATCTCTTTCTTaGTCATCTTTGCACGCCGTG +
Preference number: 2 (lower is better)
Translates to: DSESELLRGRLQSLRYTKPSSLS*SSLHAV
Trigger: CACGGCGTGCAAAGATGATCAAGAAAGAGATGACGG...CTTGGTATACCGTAATGACTGCAGCCTTCCCCGGAGCAGCTCAGACTCTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp ATGGGCAAGCTTCCGCCGCAGTGCCGTCATCTCTTTCTTGATCATCTTTGCACGTCTTCCACTGGCAGGTaGTTCTGGTTCTCCAGCAAG +
Preference number: 2 (lower is better)
Translates to: MGKLPPQCRHLFLDHLCTSSTGR*FWFSSK
Trigger: CTTGCTGGAGAACCAGAAGCACCTGCCAGTGGAAGA...CGTGCAAAGATGATCAAGAAAGAGATGACGGCACTGCGGCGGAAGCTTGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp TTGGGCGGTCCAGCTGTCTTCGGGTTCTTTTTGGAGAACAGAACTGAGGTTCTCGGCCCACACTCTGCTTaGTGGCATTCACTTCGTCCA +
Preference number: 2 (lower is better)
Translates to: LGGPAVFGFFLENRTEVLGPHSA*WHSLRP
Trigger: TGGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCC...GAGAACCTCAGTTCTGTTCTCCAAAAAGAACCCGAAGACAGCTGGACCGCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR GCA 90 bp TCCGGGGAAGGCTGCAGTCATTACGGTATACCAAGAAACTCTTCTTCACTGGTTTGCTTGTCTCCTGGCTaGTGCTCTCCTCTGCCGCAC +
Preference number: 2 (lower is better)
Translates to: SGEGCSHYGIPRNSSSLVCLSPG*CSPLPH
Trigger: GTGCGGCAGAGGAGAGCAGCAGCCAGGAGACAAGCA...AACCAGTGAAGAAGAGTTTCTTGGTATACCGTAATGACTGCAGCCTTCCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp TCTTCTCCTTGTCTAGGTCCTGGTTCACACCCAGAGGAACCAGCTTGGTCCTGGCTCTTCTTCACTGGTTaGTTTCCACCGCTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: SSPCLGPGSHPEEPAWSWLFFTG*FPPLKP
Trigger: TGGCTTCAGCGGTGGAAACCAACCAGTGAAGAAGAG...CCAGGACCAAGCTGGTTCCTCTGGGTGTGAACCAGGACCTAGACAAGGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGAAACTCTTCTTCACTaGTTGGTTTCCACCGCTGAA +
Preference number: 2 (lower is better)
Translates to: WALPLLALNCHWPLECSVETLLH*LVSTAE
Trigger: TTCAGCGGTGGAAACCAACCAGTGAAGAAGAGTTTC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp TCCGGGGAAGGCTGCAGTCATTACGGTATACCAAGAAACTCTTCTTCACTGGTTGGTCTGAAGCAGCGCTaGTACTGCTACTGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: SGEGCSHYGIPRNSSSLVGLKQR*YCYCCW
Trigger: CCAGCAGCAGTAGCAGTAGCAGCGCTGCTTCAGACC...AACCAGTGAAGAAGAGTTTCTTGGTATACCGTAATGACTGCAGCCTTCCCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp TGGGCTGTGTTGAGCAGTATCAATCACTATCGCTGGTCTCACTGCTCTGCTCGCCAGGGCACTATAGGTTaGGCTGTGTTGAGCAGTATC +
Preference number: 2 (lower is better)
Translates to: WAVLSSINHYRWSHCSARQGTIG*AVLSSI
Trigger: GATACTGCTCAACACAGCCCAACCTATAGTGCCCTG...GCGAGCAGAGCAGTGAGACCAGCGATAGTGATTGATACTGCTCAACACAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAAAATACAAACCAGTTTaGAAGGTGGGGGAATCTATG +
Preference number: 2 (lower is better)
Translates to: WALPLLALNCHWPLECSVKYKPV*KVGESM
Trigger: CATAGATTCCCCCACCTTTCAAACTGGTTTGTATTT...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383829.7
ENST00000424362.6
ENST00000457855.1
3UTR-3UTR CCA 90 bp TCCGGGGAAGGCTGCAGTCATTACGGTATACCAAGAAACTCTTCTTCACTGGTTGGGATGGGAACCCCATaGTGGAACATACCTTCTCGG +
Preference number: 2 (lower is better)
Translates to: SGEGCSHYGIPRNSSSLVGMGTP*WNIPSR
Trigger: CCGAGAAGGTATGTTCCACCATGGGGTTCCCATCCC...AACCAGTGAAGAAGAGTTTCTTGGTATACCGTAATGACTGCAGCCTTCCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR GCA 90 bp AGCTGCTCCGGGGAAGGCTGCAGTCATTACGGTATACCAAGAAACTCTTCTTCAAAGCTTCCGCCGCAGTaGCGTCATCTCTTTCTTGAT +
Preference number: 2 (lower is better)
Translates to: SCSGEGCSHYGIPRNSSSKLPPQ*RHLFLD
Trigger: ATCAAGAAAGAGATGACGGCACTGCGGCGGAAGCTT...TGAAGAAGAGTTTCTTGGTATACCGTAATGACTGCAGCCTTCCCCGGAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CCA 90 bp CGGGGAAGGCTGCAGTCATTACGGTATACCAAGAAACTCTTCTTCACTGGTTGGGTCCATCCCCGGCATTaGCCTCTTATATGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: RGRLQSLRYTKKLFFTGWVHPRH*PLICVC
Trigger: ACACACACATATAAGAGGCCAATGCCGGGGATGGAC...CCAACCAGTGAAGAAGAGTTTCTTGGTATACCGTAATGACTGCAGCCTTCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR-3UTR TCA 90 bp ATGGGCAAGCTTCCGCCGCAGTGCCGTCATCTCTTTCTTGATCATCTTTGCACGAGTTCTGCTTCATGGTaGAAAAGTCCATGGGCTTTT +
Preference number: 2 (lower is better)
Translates to: MGKLPPQCRHLFLDHLCTSSASW*KSPWAF
Trigger: AAAAGCCCATGGACTTTTTCACCATGAAGCAGAACT...CGTGCAAAGATGATCAAGAAAGAGATGACGGCACTGCGGCGGAAGCTTGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR CCA 90 bp TCCGGGGAAGGCTGCAGTCATTACGGTATACCAAGAAACTCTTCTTCACTGGTTTTCTCGGGGCATCTTTaGATCAATGATCAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: SGEGCSHYGIPRNSSSLVFSGHL*INDQSW
Trigger: CCAGCTCTGATCATTGATCCAAAGATGCCCCGAGAA...AACCAGTGAAGAAGAGTTTCTTGGTATACCGTAATGACTGCAGCCTTCCCCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CAA 90 bp GCCCAGACTCTTCCTTACCATGCTGTGGCCCACGCCGCGGCCAGTGCCCACGGACCCAGGAGGGGACTTTaGGAAAGCTGTCCATCCCCG +
Preference number: 3 (lower is better)
Translates to: AQTLPYHAVAHAAASAHGPRRGL*ESCPSP
Trigger: CGGGGATGGACAGCTTTCCAAAAGTCCCCTCCTGGG...TCCGTGGGCACTGGCCGCGGCGTGGGCCACAGCATGGTAAGGAAGAGTCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR TCA 72 bp CCATGCCGCTCAGGGCCATCACGTCCCGTCTCTCGCTaGTGGGCAAGCTTCCGCCGCAGTGCCGTCATCTCT +
Preference number: 3 (lower is better)
Translates to: PCRSGPSRPVSR*WASFRRSAVIS
Trigger: AGAGATGACGGCACTGCGGCGGAAGCTTGCCCATCAGCGAGAGACGGGACGTGATGGCCCTGAGCGGCATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 72 bp TGCCGCACTATCTGTCTGCCCATCCTTGTCACAGGCTaGCGGGTGGGGTGTCAGACTACCCCGGCTCGAGGG +
Preference number: 3 (lower is better)
Translates to: CRTICLPILVTG*RVGCQTTPARG
Trigger: CCCTCGAGCCGGGGTAGTCTGACACCCCACCCGGCAGCCTGTGACAAGGATGGGCAGACAGATAGTGCGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR CCA 72 bp CTGTGGACTTATCACTGTCGCTGTCTGAGCTCGAACTaGGCCGGGGGCTCCTACCCCGCTTGCGCTGACGCA +
Preference number: 3 (lower is better)
Translates to: LWTYHCRCLSSN*AGGSYPACADA
Trigger: TGCGTCAGCGCAAGCGGGGTAGGAGCCCCCGGCCCAGTTCGAGCTCAGACAGCGACAGTGATAAGTCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR CAA 90 bp CCCGAGAGAAGGAGGGTTTGCCCCGGCCTTGTTTTGAGGGCGTTGTGCTGGTCCCGGCCCACACTCTGCTaGCTGGCATTCACTTCGTCC +
Preference number: 3 (lower is better)
Translates to: PERRRVCPGLVLRALCWSRPTLC*LAFTSS
Trigger: GGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCG...GGACCAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCTTCTCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CAA 90 bp GCTTCCTGGGTCATCTGCTCCCCAAGTTTCAGCACCTCCAGTGGGGGCACAGGGCCTCATGTGCGGGGGTaGAGGACATGTTGGGACCCA +
Preference number: 3 (lower is better)
Translates to: ASWVICSPSFSTSSGGTGPHVRG*RTCWDP
Trigger: TGGGTCCCAACATGTCCTCAACCCCCGCACATGAGG...CCCTGTGCCCCCACTGGAGGTGCTGAAACTTGGGGAGCAGATGACCCAGGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR CAA 90 bp CCCACCTCATGTGCGGGGGTTGAGGACATGTTGGGACCCAGGCCTTTGCTTGTCCGGCCCACACTCTGCTaGCTGGCATTCACTTCGTCC +
Preference number: 3 (lower is better)
Translates to: PTSCAGVEDMLGPRPLLVRPTLC*LAFTSS
Trigger: GGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCG...GACAAGCAAAGGCCTGGGTCCCAACATGTCCTCAACCCCCGCACATGAGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR GCA 72 bp GCGTTGTGCTGGTCCGGTCTGAAGCAGCGCTGCTACTaGTACTGCTGCTGGACTCAGAGTCTGAGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: ALCWSGLKQRCY*YCCWTQSLSCS
Trigger: GGAGCAGCTCAGACTCTGAGTCCAGCAGCAGTAGCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 72 bp AGGAGGGTTTGCCCCGGCCTTGTTTTGAGGGCGTTGTaGTGGTCCGGTCTGAAGCAGCGCTGCTACTGCTAC +
Preference number: 3 (lower is better)
Translates to: RRVCPGLVLRAL*WSGLKQRCYCY
Trigger: GTAGCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 72 bp TGTCCTCTGGGAAAGTGCCCCGAGAGAAGGAGGGTTTaGCCCGGCCTTGTTTTGAGGGCGTTGTGCTGGTCC +
Preference number: 3 (lower is better)
Translates to: CPLGKCPERRRV*PGLVLRALCWS
Trigger: GGACCAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCTTCTCTCGGGGCACTTTCCCAGAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR CCA 72 bp TCTTTGCACGCCGTGAGCGGCCCACACTCTGCTTGCTaGCATTCACTTCGTCCAGCCGCTCCAGAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: SLHAVSGPHSAC*HSLRPAAPEAA
Trigger: AGCTGCTTCTGGAGCGGCTGGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCGCTCACGGCGTGCAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR CCA 72 bp AGGGTTTGCCCCGGCCTTGTTTTGAGGGCGTTGTGCTaGTCCGGTCTGAAGCAGCGCTGCTACTGCTACTGC +
Preference number: 3 (lower is better)
Translates to: RVCPGLVLRALC*SGLKQRCYCYC
Trigger: GCAGTAGCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR TCA 72 bp GGGCAAGCTTCCGCCGCAGTGCCGTCATCTCTTTCTTaGTCATCTTTGCACGCCGTGAGCGGCCCACACTCT +
Preference number: 3 (lower is better)
Translates to: GQASAAVPSSLS*SSLHAVSGPHS
Trigger: AGAGTGTGGGCCGCTCACGGCGTGCAAAGATGATCAAGAAAGAGATGACGGCACTGCGGCGGAAGCTTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 72 bp TCATCTTTGCACGCCGTGAGCGGCCCACACTCTGCTTaGTGGCATTCACTTCGTCCAGCCGCTCCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: SSLHAVSGPHSA*WHSLRPAAPEA
Trigger: TGCTTCTGGAGCGGCTGGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCGCTCACGGCGTGCAAAGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 72 bp TTGAGGGCGTTGTGCTGGTCCGGTCTGAAGCAGCGCTaGTACTGCTACTGCTGCTGGACTCAGAGTCTGAGC +
Preference number: 3 (lower is better)
Translates to: LRALCWSGLKQR*YCYCCWTQSLS
Trigger: GCTCAGACTCTGAGTCCAGCAGCAGTAGCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGCCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR CCA 72 bp TTGCGGCCCTCCAGCATCTTCTCCTTGTCTAGGTCCTaGTTCACACCCAGAGGAACCAGCTTGGTCCTGGGC +
Preference number: 3 (lower is better)
Translates to: LRPSSIFSLSRS*FTPRGTSLVLG
Trigger: GCCCAGGACCAAGCTGGTTCCTCTGGGTGTGAACCAGGACCTAGACAAGGAGAAGATGCTGGAGGGCCGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 72 bp TTGATCATCTTTGCACGCCGTGAGCGGCCCACACTCTaGTTGCTGGCATTCACTTCGTCCAGCCGCTCCAGA +
Preference number: 3 (lower is better)
Translates to: LIIFARRERPTL*LLAFTSSSRSR
Trigger: TCTGGAGCGGCTGGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCGCTCACGGCGTGCAAAGATGATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 72 bp TCCCGTCTCTCGCTGATGGGCAAGCTTCCGCCGCAGTaGCGTCATCTCTTTCTTGATCATCTTTGCACGCCG +
Preference number: 3 (lower is better)
Translates to: SRLSLMGKLPPQ*RHLFLDHLCTP
Trigger: CGGCGTGCAAAGATGATCAAGAAAGAGATGACGGCACTGCGGCGGAAGCTTGCCCATCAGCGAGAGACGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 72 bp GAGCAGTATCAATCACTATCGCTGGTCTCACTGCTCTaGTCGCCTTGCACCTTGCTGCGGTGCTGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: EQYQSLSLVSLL*SPCTLLRCCRA
Trigger: GGCTCTGCAGCACCGCAGCAAGGTGCAAGGCGAGCAGAGCAGTGAGACCAGCGATAGTGATTGATACTGCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 72 bp ACATGTTGGGACCCAGGCCTTTGCTTGTCTCCTGGCTaGTGCTCTCCTCTGCCGCACTATCTGTCTGCCCAT +
Preference number: 3 (lower is better)
Translates to: TCWDPGLCLSPG*CSPLPHYLSAH
Trigger: ATGGGCAGACAGATAGTGCGGCAGAGGAGAGCAGCAGCCAGGAGACAAGCAAAGGCCTGGGTCCCAACATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR CAA 90 bp TCTTCTCCTTGTCTAGGTCCTGGTTCACACCCAGAGGAACCAGCTTGGTCCTGGACCCAGTCTGGCTTCTaGGGGAGCATTCCTGGGGAT +
Preference number: 3 (lower is better)
Translates to: SSPCLGPGSHPEEPAWSWTQSGF*GSIPGD
Trigger: ATCCCCAGGAATGCTCCCCAAGAAGCCAGACTGGGT...CCAGGACCAAGCTGGTTCCTCTGGGTGTGAACCAGGACCTAGACAAGGAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR GCA 72 bp AGTAGGCCTCATTCTCAGTGCCTGAGGTATCCTCACTaGTGTCCTCTGGGAAAGTGCCCCGAGAGAAGGAGG +
Preference number: 3 (lower is better)
Translates to: SRPHSQCLRYPH*CPLGKCPERRR
Trigger: CCTCCTTCTCTCGGGGCACTTTCCCAGAGGACAGCAGTGAGGATACCTCAGGCACTGAGAATGAGGCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CAA 90 bp GACTCAGAGTCTGAGCTGCTCCGGGGAAGGCTGCAGTCATTACGGTATACCAAGTGCGCTGAACTGCCATaGGCCCTTGGAGTGTTCTGT +
Preference number: 3 (lower is better)
Translates to: DSESELLRGRLQSLRYTKCAELP*ALGVFC
Trigger: ACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCA...CTTGGTATACCGTAATGACTGCAGCCTTCCCCGGAGCAGCTCAGACTCTGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CAA 90 bp TCACTTCGTCCAGCCGCTCCAGAAGCAGCTTTAGCTGTTCTTCCACTGGCAGGTATTCCTGGGGATAGCTaGCCACTGCTCAGCCTAGCT +
Preference number: 3 (lower is better)
Translates to: SLRPAAPEAALAVLPLAGIPGDS*PLLSLA
Trigger: AGCTAGGCTGAGCAGTGGCAAGCTATCCCCAGGAAT...ACCTGCCAGTGGAAGAACAGCTAAAGCTGCTTCTGGAGCGGCTGGACGAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR GCA 72 bp TCCAGAAGCAGCTTTAGCTGTTCTTCCACTGGCAGGTaGTTCTGGTTCTCCAGCAAGACCAGCCGCTCTTCC +
Preference number: 3 (lower is better)
Translates to: SRSSFSCSSTGR*FWFSSKTSRSS
Trigger: GGAAGAGCGGCTGGTCTTGCTGGAGAACCAGAAGCACCTGCCAGTGGAAGAACAGCTAAAGCTGCTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 72 bp AGCCATTGGCTGGTAAGTCTTTGCTTGTCTCCTGGCTaGTGCTCTCCTCTGCCGCACTATCTGTCTGCCCAT +
Preference number: 3 (lower is better)
Translates to: SHWLVSLCLSPG*CSPLPHYLSAH
Trigger: ATGGGCAGACAGATAGTGCGGCAGAGGAGAGCAGCAGCCAGGAGACAAGCAAAGACTTACCAGCCAATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR GCA 72 bp GTGTTGAGCAGTATCAATCACTATCGCTGGTCTCACTaGTCTGCTCGCCTTGCACCTTGCTGCGGTGCTGCA +
Preference number: 3 (lower is better)
Translates to: VLSSINHYRWSH*SARLAPCCGAA
Trigger: TGCAGCACCGCAGCAAGGTGCAAGGCGAGCAGAGCAGTGAGACCAGCGATAGTGATTGATACTGCTCAACAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CAA 90 bp GACTCAGAGTCTGAGCTGCTCCGGGGAAGGCTGCAGTCATTACGGTATACCAAGTGTCCATCCCCGGCATaGGCCTCTTATATGTGTGTG +
Preference number: 3 (lower is better)
Translates to: DSESELLRGRLQSLRYTKCPSPA*ASYMCV
Trigger: CACACACATATAAGAGGCCAATGCCGGGGATGGACA...CTTGGTATACCGTAATGACTGCAGCCTTCCCCGGAGCAGCTCAGACTCTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR TCA 72 bp TGCCGTCATCTCTTTCTTGATCATCTTTGCACGCCGTaGGCGGCCCACACTCTGCTTGCTGGCATTCACTTC +
Preference number: 3 (lower is better)
Translates to: CRHLFLDHLCTP*AAHTLLAGIHF
Trigger: GAAGTGAATGCCAGCAAGCAGAGTGTGGGCCGCTCACGGCGTGCAAAGATGATCAAGAAAGAGATGACGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR GCA 72 bp TCGGGTTCTTTTTGGAGAACAGAACTGAGGTTCTCCTaGCCACCTCATGTGCGGGGGTTGAGGACATGTTGG +
Preference number: 3 (lower is better)
Translates to: SGSFWRTELRFS*PPHVRGLRTCW
Trigger: CCAACATGTCCTCAACCCCCGCACATGAGGTGGGCAGGAGAACCTCAGTTCTGTTCTCCAAAAAGAACCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR CAA 90 bp AGCTGCTCCGGGGAAGGCTGCAGTCATTACGGTATACCAAGAAACTCTTCTTCATGCGCTGAACTGCCATaGGCCCTTGGAGTGTTCTGT +
Preference number: 3 (lower is better)
Translates to: SCSGEGCSHYGIPRNSSSCAELP*ALGVFC
Trigger: ACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCA...TGAAGAAGAGTTTCTTGGTATACCGTAATGACTGCAGCCTTCCCCGGAGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR-3UTR CAA 90 bp ATGGGCAAGCTTCCGCCGCAGTGCCGTCATCTCTTTCTTGATCATCTTTGCACGTCCTTGGCGTTATACTaGAGGCAGTTGCTGACGATG +
Preference number: 3 (lower is better)
Translates to: MGKLPPQCRHLFLDHLCTSLALY*RQLLTM
Trigger: CATCGTCAGCAACTGCCTCAAGTATAACGCCAAGGA...CGTGCAAAGATGATCAAGAAAGAGATGACGGCACTGCGGCGGAAGCTTGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR-3UTR CAA 90 bp TTGGGCGGTCCAGCTGTCTTCGGGTTCTTTTTGGAGAACAGAACTGAGGTTCTCTTGCTGACGATGAGGTaGAAGTCCTCCTCAAAATCA +
Preference number: 3 (lower is better)
Translates to: LGGPAVFGFFLENRTEVLLLTMR*KSSSKS
Trigger: TGATTTTGAGGAGGACTTCAACCTCATCGTCAGCAA...GAGAACCTCAGTTCTGTTCTCCAAAAAGAACCCGAAGACAGCTGGACCGCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR TCA 72 bp CCAAGAAACTCTTCTTCACTGGTTGGTTTCCACCGCTaGAGCCATTGGCTGGTAAGTCTTTGCTTGTCTCCT +
Preference number: 3 (lower is better)
Translates to: PRNSSSLVGFHR*SHWLVSLCLSP
Trigger: AGGAGACAAGCAAAGACTTACCAGCCAATGGCTTCAGCGGTGGAAACCAACCAGTGAAGAAGAGTTTCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR CCA 72 bp TCATTACGGTATACCAAGAAACTCTTCTTCACTGGTTaGTTTCCACCGCTGAAGCCATTGGCTGGTAAGTCC +
Preference number: 3 (lower is better)
Translates to: SLRYTKKLFFTG*FPPLKPLAGKS
Trigger: GGACTTACCAGCCAATGGCTTCAGCGGTGGAAACCAACCAGTGAAGAAGAGTTTCTTGGTATACCGTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673551.1
3UTR CCA 72 bp TCATTACGGTATACCAAGAAACTCTTCTTCACTGGTTaGTTTCCACCGCTGAAGCCATTGGCTGGTAAGTCT +
Preference number: 3 (lower is better)
Translates to: SLRYTKKLFFTG*FPPLKPLAGKS
Trigger: AGACTTACCAGCCAATGGCTTCAGCGGTGGAAACCAACCAGTGAAGAAGAGTTTCTTGGTATACCGTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672126.1
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACGCGAGCCCCCAAGATaGCCGGTCTCGGGACCGGGC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPREPPR*PVSGPG
Trigger: GCCCGGTCCCGAGACCGGGCATCTTGGGGGCTCGCG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGCTCCCCGGGATTCCTaGGCTGACCCCTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCAPRDS*ADPCRS
Trigger: GGAGCGGCAGGGGTCAGCTCAGGAATCCCGGGGAGC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACGCGAGCCCCCAAGATaGCCGGTCTCGGGACCGGGC +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRREPPR*PVSGPG
Trigger: GCCCGGTCCCGAGACCGGGCATCTTGGGGGCTCGCG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGTCCCGCCGGCGCCCTaGGGTCTCAACTCCGTCGGC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVVPPAP*GLNSVG
Trigger: GCCGACGGAGTTGAGACCCCAGGGCGCCGGCGGGAC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGTCCCGCCGGCGCCCTaGGGTCTCAACTCCGTCGGC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQVPPAP*GLNSVG
Trigger: GCCGACGGAGTTGAGACCCCAGGGCGCCGGCGGGAC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGCCGGCCCGGCCTCTTaGGCGGTCCAGCTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCAGPAS*AVQLSS
Trigger: CGAAGACAGCTGGACCGCCCAAGAGGCCGGGCCGGC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGCTCCCCGGGATTCCTaGGCTGACCCCTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVAPRDS*ADPCRS
Trigger: GGAGCGGCAGGGGTCAGCTCAGGAATCCCGGGGAGC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACGTCCCGTCTCTCGCTaGTGGGCAAGCTTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPRPVSR*WASFRR
Trigger: GCGGCGGAAGCTTGCCCATCAGCGAGAGACGGGACG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCGGCTCGAGGGGCCATaGCGCTCAGGGCCATCACGT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCRLEGP*RSGPSR
Trigger: ACGTGATGGCCCTGAGCGGCATGGCCCCTCGAGCCG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATGCCGCCCCACGCTTTaGTCCCGGCTCCCCGGGATT +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPCRPTL*SRLPGI
Trigger: AATCCCGGGGAGCCGGGACCAAAGCGTGGGGCGGCA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGGCTCCGACCCCACTTaGGGAGGTCGGCGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCGSDPT*GGRRGK
Trigger: CTTTCCCCGCCGACCTCCCCAAGTGGGGTCGGAGCC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGGCTCTCCCGGTTTTTaGGGGGCCGGCCCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQGSPGF*GAGPAS
Trigger: AGAGGCCGGGCCGGCCCCCCAAAAACCGGGAGAGCC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACGTCCCGTCTCTCGCTaGTGGGCAAGCTTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVRPVSR*WASFRR
Trigger: GCGGCGGAAGCTTGCCCATCAGCGAGAGACGGGACG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCTCGGGACCGGGCGCTaGTGGAACAATGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCLGTGR*WNNGGS
Trigger: GGAGCCTCCATTGTTCCAGCAGCGCCCGGTCCCGAG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGCACGAGAGGGTGACTaGAGGCAACGGCGGCACAGC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCAREGD*RQRRHS
Trigger: GCTGTGCCGCCGTTGCCTGCAGTCACCCTCTCGTGC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCGGCTCGAGGGGCCATaGCGCTCAGGGCCATCACGT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQRLEGP*RSGPSR
Trigger: ACGTGATGGCCCTGAGCGGCATGGCCCCTCGAGCCG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGCTCGCCTTGCACCTTaGTGCGGTGCTGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCARLAP*CGAAEP
Trigger: GGGCTCTGCAGCACCGCAGCAAGGTGCAAGGCGAGC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATGCCGCCCCACGCTTTaGTCCCGGCTCCCCGGGATT +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVCRPTL*SRLPGI
Trigger: AATCCCGGGGAGCCGGGACCAAAGCGTGGGGCGGCA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCTCCGACCCCACTTaGGGAGGTCGGCGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRGSDPT*GGRRGK
Trigger: CTTTCCCCGCCGACCTCCCCAAGTGGGGTCGGAGCC...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGGAAGTTGGCCGGGGTaGGGCATCAGGGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPGSWPG*GIRGVL
Trigger: CAGGACACCCCTGATGCCCCACCCCGGCCAACTTCC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTCCTCACCCTCGCTGTaGGACAGGGCAGGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCSSPSL*DRAGSR
Trigger: CCGACTGCCTGCCCTGTCCCACAGCGAGGGTGAGGA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGACTGCCTCCGTGGCTaGGGGTCATCTGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPDCLRG*GSSGSP
Trigger: GGGAGAGCCAGATGACCCCCAGCCACGGAGGCAGTC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR TCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACACAGCACGAGAGGGTaGCTGCAGGCAACGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRHSTRG*LQATAA
Trigger: TGCCGCCGTTGCCTGCAGTCACCCTCTCGTGCTGTG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCAGGCAGTCGGCGTGCTaGACCTGGAGGCGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCRQSAC*TWRRVD
Trigger: ATCCACACGCCTCCAGGTTCAGCACGCCGACTGCCT...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCATCACTGTCGCTGTCTaGGCTCGAACTGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCITVAV*ARTGPG
Trigger: CCCCGGCCCAGTTCGAGCTCAGACAGCGACAGTGAT...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR TCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGCTGGACTCAGAGTCTaGGCTGCTCCGGGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCAGLRV*AAPGKA
Trigger: AGCCTTCCCCGGAGCAGCTCAGACTCTGAGTCCAGC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACCACCCAGCTTCCCCTaGGACTGGCCCCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRPPSFP*DWPQDQ
Trigger: CTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACTCGGGACCGGGCGCTaGTGGAACAATGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVLGTGR*WNNGGS
Trigger: GGAGCCTCCATTGTTCCAGCAGCGCCCGGTCCCGAG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGAGGGGCTGGGTGACTaGTTGTTGGCTGGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCEGLGD*LLAGRD
Trigger: GTCACGCCCAGCCAACAAGCAGTCACCCAGCCCCTC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCGCCTTGCACCTTGCTaGGGTGCTGCAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCRLAPC*GAAEPC
Trigger: ACAGGGCTCTGCAGCACCGCAGCAAGGTGCAAGGCG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGCTCGCCTTGCACCTTaGTGCGGTGCTGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQARLAP*CGAAEP
Trigger: GGGCTCTGCAGCACCGCAGCAAGGTGCAAGGCGAGC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACTGCTCTGCTCGCCTTaGACCTTGCTGCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPLLCSP*TLLRCC
Trigger: GCAGCACCGCAGCAAGGTGCAAGGCGAGCAGAGCAG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGCGCTGCTGGAACAATaGAGGCTCCCAGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPALLEQ*RLPEAA
Trigger: CGCTGCCTCTGGGAGCCTCCATTGTTCCAGCAGCGC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGGGACCGGGCGCTGCTaGAACAATGGAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQGTGRC*NNGGSQ
Trigger: CTGGGAGCCTCCATTGTTCCAGCAGCGCCCGGTCCC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTGGGTGACTGCTTGTTaGCTGGGCGTGACTGGCGCC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCWVTAC*LGVTGA
Trigger: GGCGCCAGTCACGCCCAGCCAACAAGCAGTCACCCA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATGGGTGACTGCTTGTTaGCTGGGCGTGACTGGCGCC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPWVTAC*LGVTGA
Trigger: GGCGCCAGTCACGCCCAGCCAACAAGCAGTCACCCA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGGAAGTTGGCCGGGGTaGGGCATCAGGGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQGSWPG*GIRGVL
Trigger: CAGGACACCCCTGATGCCCCACCCCGGCCAACTTCC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATTGGCCTTGTGGCACTaGATGCAGGCCCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPLALWH*MQAPEP
Trigger: GGGCTCAGGGGCCTGCATCCAGTGCCACAAGGCCAA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATCCTCACCCTCGCTGTaGGACAGGGCAGGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVSSPSL*DRAGSR
Trigger: CCGACTGCCTGCCCTGTCCCACAGCGAGGGTGAGGA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATCACAGGCTGCCGGGTaGGGTGTCAGACTACCCCGG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVSQAAG*GVRLPR
Trigger: CCGGGGTAGTCTGACACCCCACCCGGCAGCCTGTGA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCACAGGACTGCCTCCGTaGCTGGGGGTCATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCTGLPP*LGVIWL
Trigger: GAGCCAGATGACCCCCAGCCACGGAGGCAGTCCTGT...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATGTCTGAGCTCGAACTaGGCCGGGGGCTCCTACCCC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVCLSSN*AGGSYP
Trigger: GGGGTAGGAGCCCCCGGCCCAGTTCGAGCTCAGACA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACCAGAGGAACCAGCTTaGTCCTGGGCAGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPPEEPA*SWAATA
Trigger: GGCAGTGGCTGCCCAGGACCAAGCTGGTTCCTCTGG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
3UTR CAA 72 bp CTGCTCTCCTCTGCCGCACTATCTGTCTGCCCATCCTaGTCACAGGCTGCCGGGTGGGGTGTCAGACTACCC +
Preference number: 4 (lower is better)
Translates to: LLSSAALSVCPS*SQAAGWGVRLP
Trigger: GGGTAGTCTGACACCCCACCCGGCAGCCTGTGACAAGGATGGGCAGACAGATAGTGCGGCAGAGGAGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
CDS-3UTR TCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACTGTCTTGCGGACACTaGAAGAGGTGCCGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPLSCGH*KRCRWR
Trigger: GCGCCAACGGCACCTCTTTCAGTGTCCGCAAGACAG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGAGGCAGTCGGCGTGCTaGACCTGGAGGCGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQRQSAC*TWRRVD
Trigger: ATCCACACGCCTCCAGGTTCAGCACGCCGACTGCCT...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATGGGATGCAGGGCACTaGCACCACAGGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVWDAGH*HHRCCC
Trigger: GCAGCAGCACCTGTGGTGTCAGTGCCCTGCATCCCA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGAGGGACCGGCTCGCTaGAGATGTTGCCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCEGPAR*RCCLCP
Trigger: AGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACATCTTTGCACGCCGTaGGCGGCCCACACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPHLCTP*AAHTLL
Trigger: AAGCAGAGTGTGGGCCGCTCACGGCGTGCAAAGATG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACTACCCCGCTTGCGCTaGCGCAGGGAACTCATGATG +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPLPRLR*RRELMM
Trigger: CATCATGAGTTCCCTGCGTCAGCGCAAGCGGGGTAG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGCTGGACTCAGAGTCTaGGCTGCTCCGGGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVAGLRV*AAPGKA
Trigger: AGCCTTCCCCGGAGCAGCTCAGACTCTGAGTCCAGC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGAGGGGCTGGGTGACTaGTTGTTGGCTGGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQEGLGD*LLAGRD
Trigger: GTCACGCCCAGCCAACAAGCAGTCACCCAGCCCCTC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAAGTCCACCTCCACCATaGGCTGGGCCTGTGCATAGC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPSPPPP*AGPVHS
Trigger: GCTATGCACAGGCCCAGCGCATGGTGGAGGTGGACT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCAGTCCACCTCCACCATaGGCTGGGCCTGTGCATAGC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCSPPPP*AGPVHS
Trigger: GCTATGCACAGGCCCAGCGCATGGTGGAGGTGGACT...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACGGTGGACGCGGCCATaGAAGTCCACCTCCACCATG +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRRWTRP*KSTSTM
Trigger: CATGGTGGAGGTGGACTTGCATGGCCGCGTCCACCG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCGGTGGACGCGGCCATaGAAGTCCACCTCCACCATG +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQRWTRP*KSTSTM
Trigger: CATGGTGGAGGTGGACTTGCATGGCCGCGTCCACCG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACACCACAGGTGCTGCTaGCCGCTTCTCTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPHHRCC*PLLCQD
Trigger: ATCCTGGCAGAGAAGCGGGCAGCAGCACCTGTGGTG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGCCTGTGTGGTGGGATaGAGGGCACTGACACCACAG +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCACVVG*RALTPQ
Trigger: CTGTGGTGTCAGTGCCCTGCATCCCACCACACAGGC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTGCTTGTCTCCTGGCTaGTGCTCTCCTCTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCCLSPG*CSPLPH
Trigger: GTGCGGCAGAGGAGAGCAGCAGCCAGGAGACAAGCA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGGCTCCTACCCCGCTTaGGCTGACGCAGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVGSYPA*ADAGNS
Trigger: TGAGTTCCCTGCGTCAGCGCAAGCGGGGTAGGAGCC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCGCCTTGCACCTTGCTaGGGTGCTGCAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQRLAPC*GAAEPC
Trigger: ACAGGGCTCTGCAGCACCGCAGCAAGGTGCAAGGCG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCTGCTCTGCTCGCCTTaGACCTTGCTGCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQLLCSP*TLLRCC
Trigger: GCAGCACCGCAGCAAGGTGCAAGGCGAGCAGAGCAG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGCGCTGCTGGAACAATaGAGGCTCCCAGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRALLEQ*RLPEAA
Trigger: CGCTGCCTCTGGGAGCCTCCATTGTTCCAGCAGCGC...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACCGGGCACTCGTATaGTGGCTTAGTCGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCHRALV*WLSRPQ
Trigger: TTGCGGGCGACTAAGCCACCATACGAGTGCCCGGTG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATTGGCCTTGTGGCACTaGATGCAGGCCCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLALWH*MQAPEP
Trigger: GGGCTCAGGGGCCTGCATCCAGTGCCACAAGGCCAA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATCTCCAGCCAGGCTGTaGGGGATATGCATGCCCGTC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPSPARL*GICMPV
Trigger: GACGGGCATGCATATCCCCCACAGCCTGGCTGGAGA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATGGCTGGGGGTCATCTaGCTCTCCCGGTTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPWLGVI*LSRFLG
Trigger: CCCCAAAAACCGGGAGAGCCAGATGACCCCCAGCCA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACCAGAGGAACCAGCTTaGTCCTGGGCAGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVPEEPA*SWAATA
Trigger: GGCAGTGGCTGCCCAGGACCAAGCTGGTTCCTCTGG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGCCCCTCTTCCAGGCTaGACAGATGCCCACTCACCT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCAPLPG*TDAHSP
Trigger: AGGTGAGTGGGCATCTGTCCAGCCTGGAAGAGGGGC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
3UTR CAA 72 bp AGAAGGAGGGTTTGCCCCGGCCTTGTTTTGAGGGCGTaGTGCTGGTCCGGTCTGAAGCAGCGCTGCTACTGC +
Preference number: 4 (lower is better)
Translates to: RRRVCPGLVLRA*CWSGLKQRCYC
Trigger: GCAGTAGCAGCGCTGCTTCAGACCGGACCAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
CDS-3UTR TCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACTTGTTGGCTGGGCGTaGCTGGCGCCCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPLVGWA*LAPLFL
Trigger: AAGAAAAAGGGGCGCCAGTCACGCCCAGCCAACAAG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACTGTCTTGCGGACACTaGAAGAGGTGCCGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVLSCGH*KRCRWR
Trigger: GCGCCAACGGCACCTCTTTCAGTGTCCGCAAGACAG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGAGGGACCGGCTCGCTaGAGATGTTGCCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQEGPAR*RCCLCP
Trigger: AGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCATCTTTGCACGCCGTaGGCGGCCCACACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQHLCTP*AAHTLL
Trigger: AAGCAGAGTGTGGGCCGCTCACGGCGTGCAAAGATG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACTCATGTGCGGGGGTTaGGGACATGTTGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVLMCGG*GHVGTQ
Trigger: CTGGGTCCCAACATGTCCTCAACCCCCGCACATGAG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACAAAGTCCACCCCCATaGTGTCACATCGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPQSPPP*CHIGHL
Trigger: GAGGTGGCCGATGTGACAGCATGGGGGTGGACTTTG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACATGCGCTGGGCCTGTaGATAGCTCATCACCTCACG +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPHALGL*IAHHLT
Trigger: CGTGAGGTGATGAGCTATGCACAGGCCCAGCGCATG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTGCTGCCCGCTTCTCTaGCAGGATCTTCCGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCCCPLL*QDLPCL
Trigger: AAGGCACGGAAGATCCTGGCAGAGAAGCGGGCAGCA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGCCTGTGTGGTGGGATaGAGGGCACTGACACCACAG +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRACVVG*RALTPQ
Trigger: CTGTGGTGTCAGTGCCCTGCATCCCACCACACAGGC...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAACGAAGCCGCACTGCTaGCCGGTAGAAGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPTKPHC*PVEDGV
Trigger: GACACCATCTTCTACCGGGCAGCAGTGCGGCTTCGT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCTCACGAAGCCGCACTaGTGCCCGGTAGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCLTKPH*CPVEDG
Trigger: ACCATCTTCTACCGGGCAGCAGTGCGGCTTCGTGAG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAATCCTTGTCACAGGCTaGCGGGTGGGGTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPILVTG*RVGCQT
Trigger: AGTCTGACACCCCACCCGGCAGCCTGTGACAAGGAT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATGCTTGTCTCCTGGCTaGTGCTCTCCTCTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRCLSPG*CSPLPH
Trigger: GTGCGGCAGAGGAGAGCAGCAGCCAGGAGACAAGCA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGTGGGACCCAGGCCTTTaGTTGTCTCCTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQWDPGL*LSPGCC
Trigger: GCAGCAGCCAGGAGACAAGCAAAGGCCTGGGTCCCA...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGAACTGAGGTTCTCCTaGCCACCTCATGTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVELRFS*PPHVRG
Trigger: CCCCCGCACATGAGGTGGGCAGGAGAACCTCAGTTC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGGTCTGAAGCAGCGCTaGTACTGCTACTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCGLKQR*YCYCCW
Trigger: CCAGCAGCAGTAGCAGTAGCAGCGCTGCTTCAGACC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCCAGAAATGAGTCAGTaGAGAGGCCGGTGCCACTCC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCPEMSQ*RGRCHS
Trigger: GGAGTGGCACCGGCCTCTGCACTGACTCATTTCTGG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACACCGGGCACTCGTATaGTGGCTTAGTCGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRHRALV*WLSRPQ
Trigger: TTGCGGGCGACTAAGCCACCATACGAGTGCCCGGTG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTTGGCTGGGCGTGACTaGCGCCCCTTTTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCLAGRD*RPFFLC
Trigger: GCACAAGAAAAAGGGGCGCCAGTCACGCCCAGCCAA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATTGGCTGGGCGTGACTaGCGCCCCTTTTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPLAGRD*RPFFLC
Trigger: GCACAAGAAAAAGGGGCGCCAGTCACGCCCAGCCAA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCAGACCTCTGAGGGGCTaGGTGACTGCTTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCRPLRG*VTACWL
Trigger: CAGCCAACAAGCAGTCACCCAGCCCCTCAGAGGTCT...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAAAGATGCTGATGCGGTaGACGCGGCCATGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPKMLMR*TRPCKS
Trigger: GGACTTGCATGGCCGCGTCCACCGCATCAGCATCTT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACCACCTCTGGCAGCTTaGGAGTGGTGCTCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPPPLAA*EWCSQK
Trigger: TTTCTGCGAGCACCACTCCCAAGCTGCCAGAGGTGG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACCGGTAATAGGAAGTTaGCCGGGGTGGGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVPVIGS*PGWGIR
Trigger: CCTGATGCCCCACCCCGGCCAACTTCCTATTACCGG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCCGGTAATAGGAAGTTaGCCGGGGTGGGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQPVIGS*PGWGIR
Trigger: CCTGATGCCCCACCCCGGCCAACTTCCTATTACCGG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAAGGCACCGCCCTTGTTaGGGCACAGGGCACAATCCA +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRRHRPC*GTGHNP
Trigger: TGGATTGTGCCCTGTGCCCCAACAAGGGCGGTGCCT...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATCTCCAGCCAGGCTGTaGGGGATATGCATGCCCGTC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVSPARL*GICMPV
Trigger: GACGGGCATGCATATCCCCCACAGCCTGGCTGGAGA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCTTCAGTGTGGTGTGTaGCCTCATCTCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCLQCGV*PHLQPG
Trigger: GCCTGGCTGGAGATGAGGCCACACACCACACTGAAG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCCTTTGCTTGTCTCCTaGCTGCTGCTCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCPLLVS*LLLSSA
Trigger: GGCAGAGGAGAGCAGCAGCCAGGAGACAAGCAAAGG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATGCTCTCGGGCTTCCTaGGTCATCTGCTCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPCSRAS*VICSPS
Trigger: ACTTGGGGAGCAGATGACCCAGGAAGCCCGAGAGCA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGCTTTTTCTGACCTGTaGGCCCTCCCTCTCCTTGCG +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPAFSDL*ALPLLA
Trigger: CGCAAGGAGAGGGAGGGCCCACAGGTCAGAAAAAGC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGCCCCTCTTCCAGGCTaGACAGATGCCCACTCACCT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQAPLPG*TDAHSP
Trigger: AGGTGAGTGGGCATCTGTCCAGCCTGGAAGAGGGGC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
3UTR CAA 72 bp GGCGGGCACTGCTATCCATTCACCCAGTCTGGCTTCTaGGGGAGCATTCCTGGGGATAGCTTGCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: GGHCYPFTQSGF*GSIPGDSLPLL
Trigger: GAGCAGTGGCAAGCTATCCCCAGGAATGCTCCCCAAGAAGCCAGACTGGGTGAATGGATAGCAGTGCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672126.1
3UTR CAA 72 bp ATCATCTTTGCACGCCGTGAGCGGCCCACACTCTGCTaGCTGGCATTCACTTCGTCCAGCCGCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: IIFARRERPTLC*LAFTSSSRSRS
Trigger: GCTTCTGGAGCGGCTGGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCGCTCACGGCGTGCAAAGATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
CDS-3UTR TCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACTTGTTGGCTGGGCGTaGCTGGCGCCCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLVGWA*LAPLFL
Trigger: AAGAAAAAGGGGCGCCAGTCACGCCCAGCCAACAAG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGGTTGTCAAAGATGCTaGTGCGGTGGACGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQGCQRC*CGGRGH
Trigger: ATGGCCGCGTCCACCGCATCAGCATCTTTGACAACC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCACATTGTGGTGGTGGTaGTGGTTGGAGTCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCTLWWW*WLESLR
Trigger: GCGCAAGGACTCCAACCATCACCACCACCACAATGT...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTGCAAATGTAGCAGGTaGGCTTCCAGCGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCCKCSR*ASSELV
Trigger: CACCAGCTCGCTGGAAGCTCACCTGCTACATTTGCA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACTCTGGAGCTTTTTCTaGCCTGTGGGCCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLWSFF*PVGPPS
Trigger: AGAGGGAGGGCCCACAGGTCAGAAAAAGCTCCAGAG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCTCTGGAGCTTTTTCTaGCCTGTGGGCCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQLWSFF*PVGPPS
Trigger: AGAGGGAGGGCCCACAGGTCAGAAAAAGCTCCAGAG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACATGCGCTGGGCCTGTaGATAGCTCATCACCTCACG +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRHALGL*IAHHLT
Trigger: CGTGAGGTGATGAGCTATGCACAGGCCCAGCGCATG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACTCGTCCAGCTCCTCTaGAGACTTCTCGATGTACCG +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPLVQLL*RLLDVP
Trigger: CGGTACATCGAGAAGTCTGCAGAGGAGCTGGACGAG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATGCTGCCCGCTTCTCTaGCAGGATCTTCCGTGCCTT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRCCPLL*QDLPCL
Trigger: AAGGCACGGAAGATCCTGGCAGAGAAGCGGGCAGCA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATCATGCCGGAGCCGCTaGCAGGACTTGAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVSCRSR*QDLSCS
Trigger: AGAACAGCTCAAGTCCTGGCAGCGGCTCCGGCATGA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATCATGCCGGAGCCGCTaGCAGGACTTGAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRSCRSR*QDLSCS
Trigger: AGAACAGCTCAAGTCCTGGCAGCGGCTCCGGCATGA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAACGAAGCCGCACTGCTaGCCGGTAGAAGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRTKPHC*PVEDGV
Trigger: GACACCATCTTCTACCGGGCAGCAGTGCGGCTTCGT...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCTCACGAAGCCGCACTaGTGCCCGGTAGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQLTKPH*CPVEDG
Trigger: ACCATCTTCTACCGGGCAGCAGTGCGGCTTCGTGAG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGGCCCACACTCTGCTTaGTGGCATTCACTTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPGPHSA*WHSLRP
Trigger: TGGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGAGCGGCCCACACTCTaGTTGCTGGCATTCACTTCG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVERPTL*LLAFTS
Trigger: CGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCGCTC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGAGCGGCCCACACTCTaGTTGCTGGCATTCACTTCG +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRERPTL*LLAFTS
Trigger: CGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCGCTC...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAATCCTTGTCACAGGCTaGCGGGTGGGGTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVILVTG*RVGCQT
Trigger: AGTCTGACACCCCACCCGGCAGCCTGTGACAAGGAT...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAACTCAGAGTCTGAGCTaGTCCGGGGAAGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVTQSLS*SGEGCS
Trigger: ACTGCAGCCTTCCCCGGAGCAGCTCAGACTCTGAGT...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGACTCAGAGTCTGAGCTaGTCCGGGGAAGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQTQSLS*SGEGCS
Trigger: ACTGCAGCCTTCCCCGGAGCAGCTCAGACTCTGAGT...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGTCCTGGGCAGCCACTaGCAGGTTCGTTTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPVLGSH*QVRLLS
Trigger: TGACAACAAACGAACCTGGCAGTGGCTGCCCAGGAC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACTGGTCTCACTGCTCTaGTCGCCTTGCACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVLVSLL*SPCTLL
Trigger: CAGCAAGGTGCAAGGCGAGCAGAGCAGTGAGACCAG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCTGGTCTCACTGCTCTaGTCGCCTTGCACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQLVSLL*SPCTLL
Trigger: CAGCAAGGTGCAAGGCGAGCAGAGCAGTGAGACCAG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATATCGCTGGTCTCACTaGTCTGCTCGCCTTGCACCT +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPYRWSH*SARLAP
Trigger: AGGTGCAAGGCGAGCAGAGCAGTGAGACCAGCGATA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCTCCTTGCGCTGAACTaGCATTGGCCCTTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCLLALN*HWPLEC
Trigger: ACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACGGGCACTCGTATGGTaGCTTAGTCGCCCGCAAGTT +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVRALVW*LSRPQV
Trigger: AACTTGCGGGCGACTAAGCCACCATACGAGTGCCCG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGAGTGGAGTTTGTTGTaGGGGTGGTGGGTTGTCGTG +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCEWSLL*GWWVVV
Trigger: CACGACAACCCACCACCCCCACAACAAACTCCACTC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAAGACCTCTGAGGGGCTaGGTGACTGCTTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRRPLRG*VTACWL
Trigger: CAGCCAACAAGCAGTCACCCAGCCCCTCAGAGGTCT...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGGTGGTGGTGATGGTTaGAGTCCTTGCGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCGGGDG*SPCASP
Trigger: AGGAGAAGCGCAAGGACTCCAACCATCACCACCACC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGGTGGTGGTGATGGTTaGAGTCCTTGCGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPGGGDG*SPCASP
Trigger: AGGAGAAGCGCAAGGACTCCAACCATCACCACCACC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCCACCTCTGGCAGCTTaGGAGTGGTGCTCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQPPLAA*EWCSQK
Trigger: TTTCTGCGAGCACCACTCCCAAGCTGCCAGAGGTGG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACCGATAGACCACCTCTaGCAGCTTGGGAGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRPIDHL*QLGSGA
Trigger: AGCACCACTCCCAAGCTGCCAGAGGTGGTCTATCGG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACCGATAGACCACCTCTaGCAGCTTGGGAGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVPIDHL*QLGSGA
Trigger: AGCACCACTCCCAAGCTGCCAGAGGTGGTCTATCGG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCTAGGAAGACCGTGTTaGCGAAGCAGACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCLGRPC*RSRPQG
Trigger: TCCCTGAGGTCTGCTTCGCCAACACGGTCTTCCTAG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCTTCCAGCGAGCTGGTaGGATGTGCTCAATGCTGTC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCLPASW*DVLNAV
Trigger: GACAGCATTGAGCACATCCCACCAGCTCGCTGGAAG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGAGCTTCCAGCGAGCTaGTGGGATGTGCTCAATGCT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCELPAS*WDVLNA
Trigger: AGCATTGAGCACATCCCACCAGCTCGCTGGAAGCTC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACTTCAGTGTGGTGTGTaGCCTCATCTCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLQCGV*PHLQPG
Trigger: GCCTGGCTGGAGATGAGGCCACACACCACACTGAAG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACCACACTCTGCTTGCTaGCATTCACTTCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPPHSAC*HSLRPA
Trigger: GGCTGGACGAAGTGAATGCCAGCAAGCAGAGTGTGG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCTCACTGCTGTCCTCTaGGAAAGTGCCCCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCLTAVL*ESAPRE
Trigger: TTCTCTCGGGGCACTTTCCCAGAGGACAGCAGTGAG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAATGGGAACCCCATGGTaGAACATACCTTCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPMGTPW*NIPSRG
Trigger: GCCCCGAGAAGGTATGTTCCACCATGGGGTTCCCAT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATGCTCTCGGGCTTCCTaGGTCATCTGCTCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRCSRAS*VICSPS
Trigger: ACTTGGGGAGCAGATGACCCAGGAAGCCCGAGAGCA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGCTTTTTCTGACCTGTaGGCCCTCCCTCTCCTTGCG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVAFSDL*ALPLLA
Trigger: CGCAAGGAGAGGGAGGGCCCACAGGTCAGAAAAAGC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGACATTGTGGTGGTGGTaGTGGTTGGAGTCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQTLWWW*WLESLR
Trigger: GCGCAAGGACTCCAACCATCACCACCACCACAATGT...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATGTTCTCCTTGTTGCTaGCATTCTCAGGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPCSPCC*HSQGPP
Trigger: AGGAGGCCCCTGAGAATGGCAGCAACAAGGAGAACA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTGTTCTCCTTGTTGCTaGCATTCTCAGGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCCSPCC*HSQGPP
Trigger: AGGAGGCCCCTGAGAATGGCAGCAACAAGGAGAACA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGTGTTCTCCTTGTTaGTGCCATTCTCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCQCSPC*CHSQGP
Trigger: AGGCCCCTGAGAATGGCAGCAACAAGGAGAACACTG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACAGTGTTCTCCTTGTTaGTGCCATTCTCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPQCSPC*CHSQGP
Trigger: AGGCCCCTGAGAATGGCAGCAACAAGGAGAACACTG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGCAGCTTGGGAGTGGTaGTCGCAGAAACATTGTGGT +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPAAWEW*SQKHCG
Trigger: ACCACAATGTTTCTGCGAGCACCACTCCCAAGCTGC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCGAGCTGGTGGGATGTaGTCAATGCTGTCAATAGGC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCRAGGM*SMLSIG
Trigger: GCCTATTGACAGCATTGAGCACATCCCACCAGCTCG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGATTGCAGGTGTGTCTaGAGGCGACGTAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVDCRCV*RRRSNG
Trigger: CCCATTGCTACGTCGCCTGCAGACACACCTGCAATC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGATTGCAGGTGTGTCTaGAGGCGACGTAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQDCRCV*RRRSNG
Trigger: CCCATTGCTACGTCGCCTGCAGACACACCTGCAATC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAAGGCTGTGGGGGATATaGATGCCCGTCTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPRLWGI*MPVSKS
Trigger: TGACTTTGAGACGGGCATGCATATCCCCCACAGCCT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGGCCCACACTCTGCTTaGTGGCATTCACTTCGTCCA +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVGPHSA*WHSLRP
Trigger: TGGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGCCGCACTATCTGTCTaGCCATCCTTGTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRAALSV*PSLSQA
Trigger: AGCCTGTGACAAGGATGGGCAGACAGATAGTGCGGC...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGCCGCACTATCTGTCTaGCCATCCTTGTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQAALSV*PSLSQA
Trigger: AGCCTGTGACAAGGATGGGCAGACAGATAGTGCGGC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATGCTCCGGGGAAGGCTaGAGTCATTACGGTATACCA +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPCSGEG*SHYGIP
Trigger: TGGTATACCGTAATGACTGCAGCCTTCCCCGGAGCA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTGCTCCGGGGAAGGCTaGAGTCATTACGGTATACCA +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCCSGEG*SHYGIP
Trigger: TGGTATACCGTAATGACTGCAGCCTTCCCCGGAGCA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTGCTACTGCTACTGCTaGTGGACTCAGAGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCCYCYC*WTQSLS
Trigger: GCTCAGACTCTGAGTCCAGCAGCAGTAGCAGTAGCA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATGTCCTCTGGGAAAGTaGCCCGAGAGAAGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRCPLGK*PERRRV
Trigger: AACCCTCCTTCTCTCGGGGCACTTTCCCAGAGGACA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGTGTCCTCTGGGAAAGTaGCCCGAGAGAAGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQCPLGK*PERRRV
Trigger: AACCCTCCTTCTCTCGGGGCACTTTCCCAGAGGACA...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCTGAGGTATCCTCACTaGTGTCCTCTGGGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCLRYPH*CPLGKC
Trigger: GCACTTTCCCAGAGGACAGCAGTGAGGATACCTCAG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGCTTCCTGGGTCATCTaGTCCCCAAGTTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQASWVI*SPSFST
Trigger: GGTGCTGAAACTTGGGGAGCAGATGACCCAGGAAGC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGTCCTGGGCAGCCACTaGCAGGTTCGTTTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRVLGSH*QVRLLS
Trigger: TGACAACAAACGAACCTGGCAGTGGCTGCCCAGGAC...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACGATCTGTACTGACTTaGGGATGTTGGACTTGCGGC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPRSVLT*GCWTCG
Trigger: GCCGCAAGTCCAACATCCGCAAGTCAGTACAGATCG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATATCGCTGGTCTCACTaGTCTGCTCGCCTTGCACCT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRYRWSH*SARLAP
Trigger: AGGTGCAAGGCGAGCAGAGCAGTGAGACCAGCGATA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACTCCTTGCGCTGAACTaGCATTGGCCCTTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLLALN*HWPLEC
Trigger: ACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGAGTGGAGTTTGTTGTaGGGGTGGTGGGTTGTCGTG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVEWSLL*GWWVVV
Trigger: CACGACAACCCACCACCCCCACAACAAACTCCACTC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACTGGCAGCTTGGGAGTaGTGCTCGCAGAAACATTGT +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPLAAWE*CSQKHC
Trigger: ACAATGTTTCTGCGAGCACCACTCCCAAGCTGCCAG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACTAGGAAGACCGTGTTaGCGAAGCAGACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLGRPC*RSRPQG
Trigger: TCCCTGAGGTCTGCTTCGCCAACACGGTCTTCCTAG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACTTCCAGCGAGCTGGTaGGATGTGCTCAATGCTGTC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVLPASW*DVLNAV
Trigger: GACAGCATTGAGCACATCCCACCAGCTCGCTGGAAG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCAACTGGCTCTTCCTTTaGATGGTCAGGCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCNWLFL*MVRRLV
Trigger: CACCAACCGCCTGACCATCCAAAGGAAGAGCCAGTT...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGCTGCATCTTCAGTGTaGTGTGTGGCCTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCAASSV*CVASSP
Trigger: TGGAGATGAGGCCACACACCACACTGAAGATGCAGC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCCACACTCTGCTTGCTaGCATTCACTTCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQPHSAC*HSLRPA
Trigger: GGCTGGACGAAGTGAATGCCAGCAAGCAGAGTGTGG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGGGTTGAGGACATGTTaGGACCCAGGCCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQGLRTC*DPGLCL
Trigger: CAAGCAAAGGCCTGGGTCCCAACATGTCCTCAACCC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATACTGCTACTGCTGCTaGACTCAGAGTCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPYCYCC*TQSLSC
Trigger: GCAGCTCAGACTCTGAGTCCAGCAGCAGTAGCAGTA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCTCACTGCTGTCCTCTaGGAAAGTGCCCCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQLTAVL*ESAPRE
Trigger: TTCTCTCGGGGCACTTTCCCAGAGGACAGCAGTGAG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGATGGGAACCCCATGGTaGAACATACCTTCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQMGTPW*NIPSRG
Trigger: GCCCCGAGAAGGTATGTTCCACCATGGGGTTCCCAT...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGGGATGGGAACCCCATaGTGGAACATACCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQGMGTP*WNIPSR
Trigger: CCGAGAAGGTATGTTCCACCATGGGGTTCCCATCCC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGGATGGGAACCCCATaGTGGAACATACCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRGMGTP*WNIPSR
Trigger: CCGAGAAGGTATGTTCCACCATGGGGTTCCCATCCC...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGCGCTGAACTGCCATTaGCCCTTGGAGTGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCALNCH*PLECSV
Trigger: TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATCTTTGCTTGTCTCCTaGCTGCTGCTCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRSLLVS*LLLSSA
Trigger: GGCAGAGGAGAGCAGCAGCCAGGAGACAAGCAAAGA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433861.6
3UTR CAA 72 bp TCAATCACTATCGCTGGTCTCACTGCTCTGCTCGCCTaGCACCTTGCTGCGGTGCTGCAGAGCCCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: SITIAGLTALLA*HLAAVLQSPVV
Trigger: TACCACAGGGCTCTGCAGCACCGCAGCAAGGTGCAAGGCGAGCAGAGCAGTGAGACCAGCGATAGTGATTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
3UTR CAA 72 bp GAACTGAGGTTCTCCTGCCCACCTCATGTGCGGGGGTaGAGGACATGTTGGGACCCAGGCCTTTGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: ELRFSCPPHVRG*RTCWDPGLCLS
Trigger: AGACAAGCAAAGGCCTGGGTCCCAACATGTCCTCAACCCCCGCACATGAGGTGGGCAGGAGAACCTCAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673551.1
CDS-3UTR TCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGTTCTTATGTTTGCCTaGCTTGGGAGTAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPVLMFA*LGSSSW
Trigger: CCAGCTGCTACTCCCAAGTCAGGCAAACATAAGAAC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCTTCTTGACTTTCTCTaGGCTCCAGCCCTTACCCTC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQLLDFL*APALTL
Trigger: GAGGGTAAGGGCTGGAGCTCAGAGAAAGTCAAGAAG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACTTCTTGACTTTCTCTaGGCTCCAGCCCTTACCCTC +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLLDFL*APALTL
Trigger: GAGGGTAAGGGCTGGAGCTCAGAGAAAGTCAAGAAG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGTGCCTTCTTCATTTTaGTCCGGGACTTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQVPSSF*SGTWPW
Trigger: CCAAGGCCAAGTCCCGGATCAAAATGAAGAAGGCAC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGTGCCTTCTTCATTTTaGTCCGGGACTTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVVPSSF*SGTWPW
Trigger: CCAAGGCCAAGTCCCGGATCAAAATGAAGAAGGCAC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTCCATGGCAATCTGCTaGACCTTGATCGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCSMAIC*TLIVSL
Trigger: AAGGGAGACGATCAAGGTTCAGCAGATTGCCATGGA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACCGTCATCTCTTTCTTaGTCATCTTTGCACGCCGTG +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPPSSLS*SSLHAV
Trigger: CACGGCGTGCAAAGATGATCAAGAAAGAGATGACGG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGTTGGTTTCCACCGCTaGAGCCATTGGCTGGTAAGT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRVGFHR*SHWLVS
Trigger: ACTTACCAGCCAATGGCTTCAGCGGTGGAAACCAAC...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACTCATTCTCAGTGCCTaGGGTATCCTCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLILSA*GILTAV
Trigger: GACAGCAGTGAGGATACCTCAGGCACTGAGAATGAG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCTCATTCTCAGTGCCTaGGGTATCCTCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQLILSA*GILTAV
Trigger: GACAGCAGTGAGGATACCTCAGGCACTGAGAATGAG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGATCAGAGCTGGGTATaGTGGATAGCCTCGGCATTT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCDQSWV*WIASAF
Trigger: AAATGCCGAGGCTATCCATCATACCCAGCTCTGATC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACGAGCTGGTGGGATGTaGTCAATGCTGTCAATAGGC +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRRAGGM*SMLSIG
Trigger: GCCTATTGACAGCATTGAGCACATCCCACCAGCTCG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCAGGAAAGGAGTCAGCTaGATCTCCATGGCAATCTGC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCRKGVS*ISMAIC
Trigger: GCAGATTGCCATGGAGATGCAGCTGACTCCTTTCCT...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAAGGCTGTGGGGGATATaGATGCCCGTCTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVRLWGI*MPVSKS
Trigger: TGACTTTGAGACGGGCATGCATATCCCCCACAGCCT...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATCTTCCACTGGCAGGTaGTTCTGGTTCTCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVSSTGR*FWFSSK
Trigger: CTTGCTGGAGAACCAGAAGCACCTGCCAGTGGAAGA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATGCTACTGCTACTGCTaGTGGACTCAGAGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVCYCYC*WTQSLS
Trigger: GCTCAGACTCTGAGTCCAGCAGCAGTAGCAGTAGCA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACTGAGGTATCCTCACTaGTGTCCTCTGGGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVLRYPH*CPLGKC
Trigger: GCACTTTCCCAGAGGACAGCAGTGAGGATACCTCAG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCGATCTGTACTGACTTaGGGATGTTGGACTTGCGGC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQRSVLT*GCWTCG
Trigger: GCCGCAAGTCCAACATCCGCAAGTCAGTACAGATCG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATGGCTGGTAAGTCTTTaGTTGTCTCCTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRWLVSL*LSPGCC
Trigger: GCAGCAGCCAGGAGACAAGCAAAGACTTACCAGCCA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGTCGCCCGCAAGTTGTaGCAGAAAGTCTTCACATCA +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPVARKL*QKVFTS
Trigger: TGATGTGAAGACTTTCTGCCACAACTTGCGGGCGAC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCTTGGGAGTAGCAGCTaGTGTCTCAGTGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCLGSSS*CLSVLL
Trigger: AAGGAGAACACTGAGACACCAGCTGCTACTCCCAAG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACTGGCAGCTTGGGAGTaGTGCTCGCAGAAACATTGT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLAAWE*CSQKHC
Trigger: ACAATGTTTCTGCGAGCACCACTCCCAAGCTGCCAG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAAGATCTCCTGCGGGATaGGACTTACACCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVRSPAG*DLHPLS
Trigger: AGACAGAGGGTGTAAGTCCCATCCCGCAGGAGATCT...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGAGATCTCCTGCGGGATaGGACTTACACCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQRSPAG*DLHPLS
Trigger: AGACAGAGGGTGTAAGTCCCATCCCGCAGGAGATCT...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAAACTGGCTCTTCCTTTaGATGGTCAGGCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRNWLFL*MVRRLV
Trigger: CACCAACCGCCTGACCATCCAAAGGAAGAGCCAGTT...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCAGCCTCTGCATGAACTaGCTCTTCCTTTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCSLCMN*LFLWMV
Trigger: GACCATCCAAAGGAAGAGCCAGTTCATGCAGAGGCT...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCCTGTGTCCTTCTCTTaGAGCTGCTCCAAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCPVSFS*SCSKVL
Trigger: CAAAACCTTGGAGCAGCTCCAAGAGAAGGACACAGG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACTGCCCGGTAGAAGATaGTGTCCTTGGCGTTATACT +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPLPGRR*CPWRYT
Trigger: AGTATAACGCCAAGGACACCATCTTCTACCGGGCAG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGCTGCATCTTCAGTGTaGTGTGTGGCCTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVAASSV*CVASSP
Trigger: TGGAGATGAGGCCACACACCACACTGAAGATGCAGC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATACTGCTACTGCTGCTaGACTCAGAGTCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVYCYCC*TQSLSC
Trigger: GCAGCTCAGACTCTGAGTCCAGCAGCAGTAGCAGTA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGTCCTTGTCTAGGTCCTaGTTCACACCCAGAGGAACC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQSLSRS*FTPRGT
Trigger: GGTTCCTCTGGGTGTGAACCAGGACCTAGACAAGGA...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
3UTR CAA 72 bp CAGTCTGGCTTCTTGGGGAGCATTCCTGGGGATAGCTaGCCACTGCTCAGCCTAGCTGCTTTCTGCCTACAC +
Preference number: 4 (lower is better)
Translates to: QSGFLGSIPGDS*PLLSLAAFCLH
Trigger: GTGTAGGCAGAAAGCAGCTAGGCTGAGCAGTGGCAAGCTATCCCCAGGAATGCTCCCCAAGAAGCCAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672126.1
CDS-3UTR TCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGTTCTTATGTTTGCCTaGCTTGGGAGTAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQVLMFA*LGSSSW
Trigger: CCAGCTGCTACTCCCAAGTCAGGCAAACATAAGAAC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATCCGACGCTCATTCATaGTATCCAGCCAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPSDAHS*YPARCS
Trigger: ACTACATCTGGCTGGATATCATGAATGAGCGTCGGA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTCCGACGCTCATTCATaGTATCCAGCCAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCSDAHS*YPARCS
Trigger: ACTACATCTGGCTGGATATCATGAATGAGCGTCGGA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGTCCATGGCAATCTGCTaGACCTTGATCGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQSMAIC*TLIVSL
Trigger: AAGGGAGACGATCAAGGTTCAGCAGATTGCCATGGA...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATTTTGCGAAGGAGGATaGGGAAAGGAGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVFCEGG*GKESAA
Trigger: TGCAGCTGACTCCTTTCCTCATCCTCCTTCGCAAAA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATTTTGCGAAGGAGGATaGGGAAAGGAGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRFCEGG*GKESAA
Trigger: TGCAGCTGACTCCTTTCCTCATCCTCCTTCGCAAAA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACCGTCATCTCTTTCTTaGTCATCTTTGCACGCCGTG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVPSSLS*SSLHAV
Trigger: CACGGCGTGCAAAGATGATCAAGAAAGAGATGACGG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGATCAGAGCTGGGTATaGTGGATAGCCTCGGCATTT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRDQSWV*WIASAF
Trigger: AAATGCCGAGGCTATCCATCATACCCAGCTCTGATC...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGTAGGCGATCTGTACTaGCTTGCGGATGTTGGACTT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRVGDLY*LADVGL
Trigger: AAGTCCAACATCCGCAAGTCAGTACAGATCGCCTAC...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGTAGGCGATCTGTACTaGCTTGCGGATGTTGGACTT +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVVGDLY*LADVGL
Trigger: AAGTCCAACATCCGCAAGTCAGTACAGATCGCCTAC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACGCCCCTTTTTCTTGTaGTTGCGGAGTGGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRRPFFL*LRSGVC
Trigger: ACAAACTCCACTCCGCAAGCACAAGAAAAAGGGGCG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCGCCCCTTTTTCTTGTaGTTGCGGAGTGGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQRPFFL*LRSGVC
Trigger: ACAAACTCCACTCCGCAAGCACAAGAAAAAGGGGCG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTGCCAGGATCTTCCGTaGCTTCTTCATTTTGATCCG +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCCQDLP*LLHFDP
Trigger: CGGATCAAAATGAAGAAGGCACGGAAGATCCTGGCA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGAGGAAAGGAGTCAGCTaGATCTCCATGGCAATCTGC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQRKGVS*ISMAIC
Trigger: GCAGATTGCCATGGAGATGCAGCTGACTCCTTTCCT...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATCCTTCTCTTGGAGCTaGTCCAAGGTTTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVSFSWS*SKVLRR
Trigger: CCTTCGCAAAACCTTGGAGCAGCTCCAAGAGAAGGA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATCCTTCTCTTGGAGCTaGTCCAAGGTTTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRSFSWS*SKVLRR
Trigger: CCTTCGCAAAACCTTGGAGCAGCTCCAAGAGAAGGA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATGTGGGGGATATGCATaGCCGTCTCAAAGTCAATGC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVCGGYA*PSQSQC
Trigger: GCATTGACTTTGAGACGGGCATGCATATCCCCCACA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGTGTGGGGGATATGCATaGCCGTCTCAAAGTCAATGC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQCGGYA*PSQSQC
Trigger: GCATTGACTTTGAGACGGGCATGCATATCCCCCACA...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAAAGCTTCCGCCGCAGTaGCGTCATCTCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVKLPPQ*RHLFLD
Trigger: ATCAAGAAAGAGATGACGGCACTGCGGCGGAAGCTT...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAAAGCTTCCGCCGCAGTaGCGTCATCTCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRKLPPQ*RHLFLD
Trigger: ATCAAGAAAGAGATGACGGCACTGCGGCGGAAGCTT...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGTCGCCCGCAAGTTGTaGCAGAAAGTCTTCACATCA +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQVARKL*QKVFTS
Trigger: TGATGTGAAGACTTTCTGCCACAACTTGCGGGCGAC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAAGTTTGTTGTGGGGGTaGTGGGTTGTCGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRSLLWG*WVVVVI
Trigger: TATGACCACGACAACCCACCACCCCCACAACAAACT...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGAGTTTGTTGTGGGGGTaGTGGGTTGTCGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQSLLWG*WVVVVI
Trigger: TATGACCACGACAACCCACCACCCCCACAACAAACT...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGAGCCTCTGCATGAACTaGCTCTTCCTTTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQSLCMN*LFLWMV
Trigger: GACCATCCAAAGGAAGAGCCAGTTCATGCAGAGGCT...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACTGCCCGGTAGAAGATaGTGTCCTTGGCGTTATACT +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLPGRR*CPWRYT
Trigger: AGTATAACGCCAAGGACACCATCTTCTACCGGGCAG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACTCTTCTTCACTGGTTaGTTTCCACCGCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVLFFTG*FPPLKP
Trigger: TGGCTTCAGCGGTGGAAACCAACCAGTGAAGAAGAG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCTCTTCTTCACTGGTTaGTTTCCACCGCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQLFFTG*FPPLKP
Trigger: TGGCTTCAGCGGTGGAAACCAACCAGTGAAGAAGAG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGGCACTATAGGTTaGGCTGTGTTGAGCAGTATC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVQGTIG*AVLSSI
Trigger: GATACTGCTCAACACAGCCCAACCTATAGTGCCCTG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACAGGGCACTATAGGTTaGGCTGTGTTGAGCAGTATC +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRQGTIG*AVLSSI
Trigger: GATACTGCTCAACACAGCCCAACCTATAGTGCCCTG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGAAAGAGAAGGGAAATaGGGACAGCCCCCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQEREGK*GQPPVF
Trigger: AAAGACTGGGGGCTGTCCCCATTTCCCTTCTCTTTC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR TCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGGGTCGCCTTTATTATaGCTCTCAAAGTACGACTCC +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQGSPLL*LSKYDS
Trigger: GGAGTCGTACTTTGAGAGTCATAATAAAGGCGACCC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGGGTCGCCTTTATTATaGCTCTCAAAGTACGACTCC +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVGSPLL*LSKYDS
Trigger: GGAGTCGTACTTTGAGAGTCATAATAAAGGCGACCC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAAGTCCATGGGCTTTTTaGTGTGGTCTAGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRSPWAF*CGLGSQ
Trigger: CTGACTACCTAGACCACATCAAAAAGCCCATGGACT...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAAGTCCATGGGCTTTTTaGTGTGGTCTAGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVSPWAF*CGLGSQ
Trigger: CTGACTACCTAGACCACATCAAAAAGCCCATGGACT...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGCATCTTTGGATCAATaGTCAGAGCTGGGTATGATG +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPASLDQ*SELGMM
Trigger: CATCATACCCAGCTCTGATCATTGATCCAAAGATGC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGATGGTTGGAGTCCTTaGGCTTCTCCTTGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCDGWSP*ASPCSY
Trigger: ATAAGAACAAGGAGAAGCGCAAGGACTCCAACCATC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAATGACATTGCTGTTCTaGCACTCACCATCATTGCAG +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPMTLLF*HSPSLQ
Trigger: CTGCAATGATGGTGAGTGCCAGAACAGCAATGTCAT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGAAACTCTTCTTCACTaGTTGGTTTCCACCGCTGAA +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPETLLH*LVSTAE
Trigger: TTCAGCGGTGGAAACCAACCAGTGAAGAAGAGTTTC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATTCTCGGGGCATCTTTaGATCAATGATCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRFSGHL*INDQSW
Trigger: CCAGCTCTGATCATTGATCCAAAGATGCCCCGAGAA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATTCTCGGGGCATCTTTaGATCAATGATCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVFSGHL*INDQSW
Trigger: CCAGCTCTGATCATTGATCCAAAGATGCCCCGAGAA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGCATCTTTGGATCAATaGTCAGAGCTGGGTATGATG +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVASLDQ*SELGMM
Trigger: CATCATACCCAGCTCTGATCATTGATCCAAAGATGC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR GCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGATGGTTGGAGTCCTTaGGCTTCTCCTTGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVDGWSP*ASPCSY
Trigger: ATAAGAACAAGGAGAAGCGCAAGGACTCCAACCATC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGAAACTCTTCTTCACTaGTTGGTTTCCACCGCTGAA +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQETLLH*LVSTAE
Trigger: TTCAGCGGTGGAAACCAACCAGTGAAGAAGAGTTTC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGAGTTCTGCTTCATGGTaGAAAAGTCCATGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: ALPLLALNCHWPLECSVQSSASW*KSPWAF
Trigger: AAAAGCCCATGGACTTTTTCACCATGAAGCAGAACT...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAAGTTCTGCTTCATGGTaGAAAAGTCCATGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: WALPLLALNCHWPLECSVSSASW*KSPWAF
Trigger: AAAAGCCCATGGACTTTTTCACCATGAAGCAGAACT...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR TCA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAAAATACAAACCAGTTTaGAAGGTGGGGGAATCTATG +
Preference number: 4 (lower is better)
Translates to: SPETGPKTRNESVQRPVPKYKPV*KVGESM
Trigger: CATAGATTCCCCCACCTTTCAAACTGGTTTGTATTT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000383829.7
3UTR CAA 72 bp GGAGAGAAGTCACAGGGCACTATAGGTTGGGCTGTGTaGAGCAGTATCAATCACTATCGCTGGTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GEKSQGTIGWAV*SSINHYRWSHC
Trigger: GCAGTGAGACCAGCGATAGTGATTGATACTGCTCAACACAGCCCAACCTATAGTGCCCTGTGACTTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672126.1
ENST00000673551.1
CDS CCA 90 bp TGGAGGCTCCCAGAGGCAGCGCGAGGACAGCGGCGGCGGAGACCGTaGCGGCAAAGGCTGTGGCAGCGGCGGCGGCAGCAGCGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: WRLPEAARGQRRRRP*RQRLWQRRRQQRRR
Trigger: TCGCCGCCGCTGCTGCCGCCGCCGCTGCCACAGCCTTTGCCGCCACGGTCTCCGCCGCCGCTGTCCTCGCGCTGCCTCTGGGAGCCTCCA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383829.7
ENST00000433861.6
ENST00000683743.1
ENST00000684333.1
ENST00000684608.1
CDS GCA 90 bp GGTCTCAACTCCGTCGGCCGCCGCCCGTTTCGCGAGCCCCCAAGATaGCCGGTCTCGGGACCGGGCGCTGCTGGAACAATGGAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: GLNSVGRRPFREPPR*PVSGPGAAGTMEAP
Trigger: GGGAGCCTCCATTGTTCCAGCAGCGCCCGGTCCCGAGACCGGGCATCTTGGGGGCTCGCGAAACGGGCGGCGGCCGACGGAGTTGAGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000433861.6
ENST00000683639.1
ENST00000683743.1
ENST00000684206.1
ENST00000684333.1
ENST00000684608.1
CDS CCA 90 bp GGGGCTGGCGAGACCCTGACACTGGGTCCCCAGCATCCCTGGCCTTaGGCAAGGGAACTTACTGCTGTGGCCCACGCCGCGGCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: GAGETLTLGPQHPWP*ARELTAVAHAAASA
Trigger: GGCACTGGCCGCGGCGTGGGCCACAGCAGTAAGTTCCCTTGCCCAAGGCCAGGGATGCTGGGGACCCAGTGTCAGGGTCTCGCCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000672515.2
ENST00000682208.1
ENST00000683639.1
ENST00000683986.1
CDS GCA 90 bp GACACTGGGTCCCCAGCATCCCTGGCCTTGGGCAAGGGAACTTACTaGTGTGGCCCACGCCGCGGCCAGTGCCCACGGAGTAGGCCTCAT +
Preference number: 5 (lower is better)
Translates to: DTGSPASLALGKGTY*CGPRRGQCPRSRPH
Trigger: ATGAGGCCTACTCCGTGGGCACTGGCCGCGGCGTGGGCCACAGCAGTAAGTTCCCTTGCCCAAGGCCAGGGATGCTGGGGACCCAGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672515.2
ENST00000682208.1
ENST00000683639.1
ENST00000683986.1
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGGCCGGCCCGGCCTCTaGGGCGGTCCAGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPGRPGL*GGPAVF
Trigger: GAAGACAGCTGGACCGCCCAAGAGGCCGGGCCGGCC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR CAA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACTGCCGCCCCACGCTTaGGTCCCGGCTCCCCGGGAT +
Preference number: 5 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLPPHA*VPAPRD
Trigger: ATCCCGGGGAGCCGGGACCAAAGCGTGGGGCGGCAG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS GCA 90 bp GCCTTGGGCAAGGGAACTTACTGCTGTGGCCCACGCCGCGGCCAGTaGCCACGGAGTAGGCCTCATTCTCAGTGCCTGAGGTATCCTCAC +
Preference number: 5 (lower is better)
Translates to: ALGKGTYCCGPRRGQ*PRSRPHSQCLRYPH
Trigger: GTGAGGATACCTCAGGCACTGAGAATGAGGCCTACTCCGTGGGCACTGGCCGCGGCGTGGGCCACAGCAGTAAGTTCCCTTGCCCAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672515.2
ENST00000682208.1
ENST00000683639.1
ENST00000683986.1
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGGGCTGGGTGACTGCTaGTTGGCTGGGCGTGACTGG +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPGLGDC*LAGRDW
Trigger: CCAGTCACGCCCAGCCAACAAGCAGTCACCCAGCCC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGGGCTGGGTGACTGCTaGTTGGCTGGGCGTGACTGG +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCGLGDC*LAGRDW
Trigger: CCAGTCACGCCCAGCCAACAAGCAGTCACCCAGCCC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACTGGGTGACTGCTTGTaGGCTGGGCGTGACTGGCGC +
Preference number: 5 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLGDCL*AGRDWR
Trigger: GCGCCAGTCACGCCCAGCCAACAAGCAGTCACCCAG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAAAGGCACCGCCCTTGTaGGGGCACAGGGCACAATCC +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPKAPPL*GHRAQS
Trigger: GGATTGTGCCCTGTGCCCCAACAAGGGCGGTGCCTT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCTGAAAGAGGTGCCGTaGGCGCCTGTCTCCCGCACA +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCLKEVP*APVSRT
Trigger: TGTGCGGGAGACAGGCGCCAACGGCACCTCTTTCAG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGTGCTCGCCTTGCACCTaGCTGCGGTGCTGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQCSPCT*LRCCRA
Trigger: GGCTCTGCAGCACCGCAGCAAGGTGCAAGGCGAGCA...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCACTGCTCTGCTCGCCTaGCACCTTGCTGCGGTGCTG +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCTALLA*HLAAVL
Trigger: CAGCACCGCAGCAAGGTGCAAGGCGAGCAGAGCAGT...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAACTGCTCTGCTCGCCTaGCACCTTGCTGCGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPTALLA*HLAAVL
Trigger: CAGCACCGCAGCAAGGTGCAAGGCGAGCAGAGCAGT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGCGGAGTGGAGTTTGTaGTGGGGGTGGTGGGTTGTC +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCAEWSL*WGWWVV
Trigger: GACAACCCACCACCCCCACAACAAACTCCACTCCGC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAACCACCTCTGGCAGCTaGGGAGTGGTGCTCGCAGAA +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPTTSGS*GVVLAE
Trigger: TTCTGCGAGCACCACTCCCAAGCTGCCAGAGGTGGT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGAAGGCACCGCCCTTGTaGGGGCACAGGGCACAATCC +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQKAPPL*GHRAQS
Trigger: GGATTGTGCCCTGTGCCCCAACAAGGGCGGTGCCTT...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACTGAAAGAGGTGCCGTaGGCGCCTGTCTCCCGCACA +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVLKEVP*APVSRT
Trigger: TGTGCGGGAGACAGGCGCCAACGGCACCTCTTTCAG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCGGCCCACACTCTGCTaGCTGGCATTCACTTCGTCC +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCRPTLC*LAFTSS
Trigger: GGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCCTCATGTGCGGGGGTaGAGGACATGTTGGGACCCA +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCPHVRG*RTCWDP
Trigger: TGGGTCCCAACATGTCCTCAACCCCCGCACATGAGG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS TCA 90 bp CATTCTGGGCCCTTGGGGTGTGACAGGGACAAGACAGAGTCCAGGTaGTACATGTGGCTCCAGTTCATCCTGCCCCAGAGCCACCAGCCC +
Preference number: 5 (lower is better)
Translates to: HSGPLGCDRDKTESR*YMWLQFILPQSHQP
Trigger: GGGCTGGTGGCTCTGGGGCAGGATGAACTGGAGCCACATGTATCACCTGGACTCTGTCTTGTCCCTGTCACACCCCAAGGGCCCAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684608.1
CDS CCA 90 bp TGGGGCATCAGGGGTGTCCTGTTCCAGCTCCCGATAGACCACCTCTaGCAGCTTGGGAGTGGTGCTCGCAGAAACATTGTGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: WGIRGVLFQLPIDHL*QLGSGARRNIVVVV
Trigger: CACCACCACCACAATGTTTCTGCGAGCACCACTCCCAAGCTGCCAGAGGTGGTCTATCGGGAGCTGGAACAGGACACCCCTGATGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAACCACCTCTGGCAGCTaGGGAGTGGTGCTCGCAGAA +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVTTSGS*GVVLAE
Trigger: TTCTGCGAGCACCACTCCCAAGCTGCCAGAGGTGGT...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGACCGGTAATAGGAAGTaGGCCGGGGTGGGGCATCAG +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQTGNRK*AGVGHQ
Trigger: CTGATGCCCCACCCCGGCCAACTTCCTATTACCGGT...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAACCGGTAATAGGAAGTaGGCCGGGGTGGGGCATCAG +
Preference number: 5 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRTGNRK*AGVGHQ
Trigger: CTGATGCCCCACCCCGGCCAACTTCCTATTACCGGT...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTCTAGGAAGACCGTGTaGGCGAAGCAGACCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCSRKTV*AKQTSG
Trigger: CCCTGAGGTCTGCTTCGCCAACACGGTCTTCCTAGA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAAGCCGCTGCCAGGACTaGAGCTGTTCTTTAAGGGCC +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPSRCQD*SCSLRA
Trigger: GGCCCTTAAAGAACAGCTCAAGTCCTGGCAGCGGCT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCAGCCGCTGCCAGGACTaGAGCTGTTCTTTAAGGGCC +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCSRCQD*SCSLRA
Trigger: GGCCCTTAAAGAACAGCTCAAGTCCTGGCAGCGGCT...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACGGCCCACACTCTGCTaGCTGGCATTCACTTCGTCC +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVRPTLC*LAFTSS
Trigger: GGACGAAGTGAATGCCAGCAAGCAGAGTGTGGGCCG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACGAGAGAAGGAGGGTTaGCCCCGGCCTTGTTTTGAG +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPREKEG*PRPCFE
Trigger: CTCAAAACAAGGCCGGGGCAAACCCTCCTTCTCTCG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS TCA 90 bp GGGCTTCCTCATCCTCTGACACCACATCCAGGTTGTCAAAGATGCTaGTGCGGTGGACGCGGCCATGCAAGTCCACCTCCACCATGCGCT +
Preference number: 5 (lower is better)
Translates to: GLPHPLTPHPGCQRC*CGGRGHASPPPPCA
Trigger: AGCGCATGGTGGAGGTGGACTTGCATGGCCGCGTCCACCGCATCAGCATCTTTGACAACCTGGATGTGGTGTCAGAGGATGAGGAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS GCA 90 bp TCCAGCCGCTCCAGAAGCAGCTTTAGCTGTTCTTCCACTGGCAGGTaGTTCTGGTTCTCCAGCAAGACCAGCCGCTCTTCCTCGGCAGGA +
Preference number: 5 (lower is better)
Translates to: SSRSRSSFSCSSTGR*FWFSSKTSRSSSAG
Trigger: TCCTGCCGAGGAAGAGCGGCTGGTCTTGCTGGAGAACCAGAAGCACCTGCCAGTGGAAGAACAGCTAAAGCTGCTTCTGGAGCGGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684250.1
CDS GCA 90 bp CTAGCCCGGGCAGCCCCGAAAGATACACTGTTGCCCCAGGATGCCTaGTGGGAAGCAATGCACTGTCAGTTCTCCCAACTGGAGTTGCCA +
Preference number: 5 (lower is better)
Translates to: LARAAPKDTLLPQDA*WEAMHCQFSQLELP
Trigger: TGGCAACTCCAGTTGGGAGAACTGACAGTGCATTGCTTCCCAGCAGGCATCCTGGGGCAACAGTGTATCTTTCGGGGCTGCCCGGGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684199.1
CDS GCA 90 bp GCCACTAGCCCGGGCAGCCCCGAAAGATACACTGTTGCCCCAGGATaGCTGCTGGGAAGCAATGCACTGTCAGTTCTCCCAACTGGAGTT +
Preference number: 5 (lower is better)
Translates to: ATSPGSPERYTVAPG*LLGSNALSVLPTGV
Trigger: AACTCCAGTTGGGAGAACTGACAGTGCATTGCTTCCCAGCAGGCATCCTGGGGCAACAGTGTATCTTTCGGGGCTGCCCGGGCTAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684199.1
CDS CCA 90 bp CAGGGGTGTCCTGTTCCAGCTCCCGATAGACCACCTCTGGCAGCTTaGGAGTGGTGCTCGCAGAAACATTGTGGTGGTGGTGATGGTTGG +
Preference number: 5 (lower is better)
Translates to: QGCPVPAPDRPPLAA*EWCSQKHCGGGDGW
Trigger: CCAACCATCACCACCACCACAATGTTTCTGCGAGCACCACTCCCAAGCTGCCAGAGGTGGTCTATCGGGAGCTGGAACAGGACACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CCA 90 bp CTCTGCAGACTTCTCGATGTACCGGTAATAGGAAGTTGGCCGGGGTaGGGCATCAGGGGTGTCCTGTTCCAGCTCCCGATAGACCACCTC +
Preference number: 5 (lower is better)
Translates to: LCRLLDVPVIGSWPG*GIRGVLFQLPIDHL
Trigger: GAGGTGGTCTATCGGGAGCTGGAACAGGACACCCCTGATGCCCCACCCCGGCCAACTTCCTATTACCGGTACATCGAGAAGTCTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACTTGCGGAGTGGAGTTaGTTGTGGGGGTGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVLAEWS*LWGWWV
Trigger: AACCCACCACCCCCACAACAAACTCCACTCCGCAAG...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTGGCGCCCCTTTTTCTaGTGCTTGCGGAGTGGAGTT +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCWRPFF*CLRSGV
Trigger: AACTCCACTCCGCAAGCACAAGAAAAAGGGGCGCCA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATCTAGGAAGACCGTGTaGGCGAAGCAGACCTCAGGG +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVSRKTV*AKQTSG
Trigger: CCCTGAGGTCTGCTTCGCCAACACGGTCTTCCTAGA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGAACTGGCTCTTCCTTaGGATGGTCAGGCGGTTGGT +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPELALP*DGQAVG
Trigger: ACCAACCGCCTGACCATCCAAAGGAAGAGCCAGTTC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGAACTGGCTCTTCCTTaGGATGGTCAGGCGGTTGGT +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCELALP*DGQAVG
Trigger: ACCAACCGCCTGACCATCCAAAGGAAGAGCCAGTTC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCACAGTTCCTCTGAGATaGCAGGTGTGTCTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCTVPLR*QVCLQA
Trigger: CGCCTGCAGACACACCTGCAATCTCAGAGGAACTGT...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAACAGTTCCTCTGAGATaGCAGGTGTGTCTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPTVPLR*QVCLQA
Trigger: CGCCTGCAGACACACCTGCAATCTCAGAGGAACTGT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGGCTCGCTGAAGATGTaGCCTGTGTCCTTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPGSLKM*PVSFSW
Trigger: CCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACCACCGCTGAAGCCATaGGCTGGTAAGTCCATTGGG +
Preference number: 5 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRPPLKP*AGKSIG
Trigger: CCCAATGGACTTACCAGCCAATGGCTTCAGCGGTGG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCTTGTTTTGAGGGCGTaGTGCTGGTCCGGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCLVLRA*CWSGLK
Trigger: CTTCAGACCGGACCAGCACAACGCCCTCAAAACAAG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCGAGAGAAGGAGGGTTaGCCCCGGCCTTGTTTTGAG +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQREKEG*PRPCFE
Trigger: CTCAAAACAAGGCCGGGGCAAACCCTCCTTCTCTCG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS TCA 90 bp AGACTGCCTCCCATTCTGGGCCCTCAGACAGAGGGACCGGCTCGCTaGAGATGTTGCCTGTGTCCTTCTCTTGGAGCTGCTCCAAGGTTT +
Preference number: 5 (lower is better)
Translates to: RLPPILGPQTEGPAR*RCCLCPSLGAAPRF
Trigger: AAACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTCTGAGGGCCCAGAATGGGAGGCAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673551.2
CDS TCA 90 bp TGGGGAAGGAGTGCAGACTGCCTCCCATTCTGGGCCCTTGGGGTGTaGCAGGGACAAGACAGAGTCCAGGTGATACATGTGGCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: WGRSADCLPFWALGV*QGQDRVQVIHVAPV
Trigger: AACTGGAGCCACATGTATCACCTGGACTCTGTCTTGTCCCTGTCACACCCCAAGGGCCCAGAATGGGAGGCAGTCTGCACTCCTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684608.1
CDS GCA 90 bp CCTGTTCCAGCTCCCGATAGACCACCTCTGGCAGCTTGGGAGTGGTaGTCGCAGAAACATTGTGGTGGTGGTGATGGTTGGAGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: PVPAPDRPPLAAWEW*SQKHCGGGDGWSPC
Trigger: GCAAGGACTCCAACCATCACCACCACCACAATGTTTCTGCGAGCACCACTCCCAAGCTGCCAGAGGTGGTCTATCGGGAGCTGGAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS GCA 90 bp CCTCACTGCTGTCCTCTGGGAAAGTGCCCCGAGAGAAGGAGGGTTTaGCCCGGCCTTGTTTTGAGGGCGTTGTGCTGTGGACAAGACAAT +
Preference number: 5 (lower is better)
Translates to: PHCCPLGKCPERRRV*PGLVLRALCCGQDN
Trigger: ATTGTCTTGTCCACAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCTTCTCTCGGGGCACTTTCCCAGAGGACAGCAGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683986.1
CDS GCA 90 bp TCCAGCCGCTCCAGAAGCAGCTTTAGCTGTTCTTCCACTGGCAGGTaGTTCTGGTTCTCCAGCAAGACCAGCCGCTCTTCCTCGGCTGTT +
Preference number: 5 (lower is better)
Translates to: SSRSRSSFSCSSTGR*FWFSSKTSRSSSAV
Trigger: AACAGCCGAGGAAGAGCGGCTGGTCTTGCTGGAGAACCAGAAGCACCTGCCAGTGGAAGAACAGCTAAAGCTGCTTCTGGAGCGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683423.1
CDS GCA 90 bp CCCCGAAAGATACACTGTTGCCCCAGGATGCCTGCTGGGAAGCAATaGACTGTCAGTTCTCCCAACTGGAGTTGCCAGAGAGGTTCCCGG +
Preference number: 5 (lower is better)
Translates to: PRKIHCCPRMPAGKQ*TVSSPNWSCQRGSR
Trigger: CCGGGAACCTCTCTGGCAACTCCAGTTGGGAGAACTGACAGTGCATTGCTTCCCAGCAGGCATCCTGGGGCAACAGTGTATCTTTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684199.1
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAGACACCACATCCAGGTaGTCAAAGATGCTGATGCGG +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPDTTSR*SKMLMR
Trigger: CCGCATCAGCATCTTTGACAACCTGGATGTGGTGTC...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATCAGTGTTCTCCTTGTaGCTGCCATTCTCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVSVFSL*LPFSGA
Trigger: GGCCCCTGAGAATGGCAGCAACAAGGAGAACACTGA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCACGTGCCTTCTTCATTTaGATCCGGGACTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPRAFFI*IRDLAL
Trigger: CAAGGCCAAGTCCCGGATCAAAATGAAGAAGGCACG...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCGTGCCTTCTTCATTTaGATCCGGGACTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCRAFFI*IRDLAL
Trigger: CAAGGCCAAGTCCCGGATCAAAATGAAGAAGGCACG...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCGCCTGTGTCCTTCTCTaGGAGCTGCTCCAAGGTTTT +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCACVLL*ELLQGF
Trigger: AAAACCTTGGAGCAGCTCCAAGAGAAGGACACAGGC...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAGGCTCGCTGAAGATGTaGCCTGTGTCCTTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVGSLKM*PVSFSW
Trigger: CCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCC...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCTTGTTTTGAGGGCGTaGTGCTGGTCCGGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQLVLRA*CWSGLK
Trigger: CTTCAGACCGGACCAGCACAACGCCCTCAAAACAAG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGCGATCTGTACTGACTaGCGGATGTTGGACTTGCGG +
Preference number: 5 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRAICTD*RMLDLR
Trigger: CCGCAAGTCCAACATCCGCAAGTCAGTACAGATCGC...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGCGATCTGTACTGACTaGCGGATGTTGGACTTGCGG +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQAICTD*RMLDLR
Trigger: CCGCAAGTCCAACATCCGCAAGTCAGTACAGATCGC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGTGCGCTGAACTGCCATaGGCCCTTGGAGTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQCAELP*ALGVFC
Trigger: ACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCA...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATGCGCTGAACTGCCATaGGCCCTTGGAGTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVCAELP*ALGVFC
Trigger: ACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS GCA 90 bp GGGACCGGCTCGCTGAAGATGTTGCCTGTGTCCTTCTCTTGGAGCTaGTCCAAGGTTTTGCGAAGGAGGATGAGGAAAGGAGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GTGSLKMLPVSFSWS*SKVLRRRMRKGVSC
Trigger: GCAGCTGACTCCTTTCCTCATCCTCCTTCGCAAAACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CCA 90 bp TGTCCTGTTCCAGCTCCCGATAGACCACCTCTGGCAGCTTGGGAGTaGTGCTCGCAGAAACATTGTGGTGGTGGTGATGGTTGGAGTCCT +
Preference number: 5 (lower is better)
Translates to: CPVPAPDRPPLAAWE*CSQKHCGGGDGWSP
Trigger: AGGACTCCAACCATCACCACCACCACAATGTTTCTGCGAGCACCACTCCCAAGCTGCCAGAGGTGGTCTATCGGGAGCTGGAACAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGACACCACATCCAGGTaGTCAAAGATGCTGATGCGG +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQDTTSR*SKMLMR
Trigger: CCGCATCAGCATCTTTGACAACCTGGATGTGGTGTC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATTATGTTTGCCTGACTaGGGAGTAGCAGCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPLCLPD*GVAAGV
Trigger: GACACCAGCTGCTACTCCCAAGTCAGGCAAACATAA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAATTTTGATCCGGGACTaGGCCTTGGCCTTCTTGACT +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPILIRD*ALAFLT
Trigger: AGTCAAGAAGGCCAAGGCCAAGTCCCGGATCAAAAT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTGGATGGTCAGGCGGTaGGTGATTTTACTAAGCCTG +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCWMVRR*VILLSL
Trigger: CAGGCTTAGTAAAATCACCAACCGCCTGACCATCCA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTTGAGTTTTTCCCGCTaGCGGATCAATTCCACGAGC +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCLSFSR*RINSTS
Trigger: GCTCGTGGAATTGATCCGCAAGCGGGAAAAACTCAA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATTGATCGTCTCCCTTTaGAGTTTTTCCCGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPLIVSL*SFSRLR
Trigger: CCGCAAGCGGGAAAAACTCAAAAGGGAGACGATCAA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTTGATCGTCTCCCTTTaGAGTTTTTCCCGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCLIVSL*SFSRLR
Trigger: CCGCAAGCGGGAAAAACTCAAAAGGGAGACGATCAA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAAGCTGCTCCAAGGTTTaGCGAAGGAGGATGAGGAAA +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPSCSKV*RRRMRK
Trigger: TTTCCTCATCCTCCTTCGCAAAACCTTGGAGCAGCT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGCCTGTGTCCTTCTCTaGGAGCTGCTCCAAGGTTTT +
Preference number: 5 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRACVLL*ELLQGF
Trigger: AAAACCTTGGAGCAGCTCCAAGAGAAGGACACAGGC...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAACTCTTCTTCACTGGTaGGTTTCCACCGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVTLLHW*VSTAEA
Trigger: GGCTTCAGCGGTGGAAACCAACCAGTGAAGAAGAGT...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCTCCAGCATCTTCTCCTaGTCTAGGTCCTGGTTCACA +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCSSIFS*SRSWFT
Trigger: TGTGAACCAGGACCTAGACAAGGAGAAGATGCTGGA...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCAACAGGGCACTATAGGTaGGGCTGTGTTGAGCAGTAT +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPTGHYR*GCVEQY
Trigger: ATACTGCTCAACACAGCCCAACCTATAGTGCCCTGT...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCTGGTAAGTCTTTGCTaGTCTCCTGGCTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQLVSLC*SPGCCS
Trigger: AGAGCAGCAGCCAGGAGACAAGCAAAGACTTACCAG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGTTGGCTGGTAAGTCTTaGCTTGTCTCCTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQLAGKS*LVSWLL
Trigger: CAGCAGCCAGGAGACAAGCAAAGACTTACCAGCCAA...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433861.6
CDS CCA 90 bp GTCTCCACCGGGCACTCGTATGGTGGCTTAGTCGCCCGCAAGTTGTaGCAGAAAGTCTTCACATCAAAGTCCACCCCCATGCTGTCACAT +
Preference number: 5 (lower is better)
Translates to: VSTGHSYGGLVARKL*QKVFTSKSTPMLSH
Trigger: ATGTGACAGCATGGGGGTGGACTTTGATGTGAAGACTTTCTGCCACAACTTGCGGGCGACTAAGCCACCATACGAGTGCCCGGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CCA 90 bp GACAGAGGGACCGGCTCGCTGAAGATGTTGCCTGTGTCCTTCTCTTaGAGCTGCTCCAAGGTTTTGCGAAGGAGGATGAGGAAAGGAGTC +
Preference number: 5 (lower is better)
Translates to: DRGTGSLKMLPVSFS*SCSKVLRRRMRKGV
Trigger: GACTCCTTTCCTCATCCTCCTTCGCAAAACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS-3UTR CAA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATTAGTCGCCCGCAAGTaGTGGCAGAAAGTCTTCACA +
Preference number: 5 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLVARK*WQKVFT
Trigger: TGTGAAGACTTTCTGCCACAACTTGCGGGCGACTAA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATTAGTCGCCCGCAAGTaGTGGCAGAAAGTCTTCACA +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVLVARK*WQKVFT
Trigger: TGTGAAGACTTTCTGCCACAACTTGCGGGCGACTAA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATTATGTTTGCCTGACTaGGGAGTAGCAGCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLCLPD*GVAAGV
Trigger: GACACCAGCTGCTACTCCCAAGTCAGGCAAACATAA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATCCTTGCGCTTCTCCTaGTTCTTATGTTTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPSLRFS*FLCLPD
Trigger: GTCAGGCAAACATAAGAACAAGGAGAAGCGCAAGGA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGATTTTGATCCGGGACTaGGCCTTGGCCTTCTTGACT +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQILIRD*ALAFLT
Trigger: AGTCAAGAAGGCCAAGGCCAAGTCCCGGATCAAAAT...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGTGGATGGTCAGGCGGTaGGTGATTTTACTAAGCCTG +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQWMVRR*VILLSL
Trigger: CAGGCTTAGTAAAATCACCAACCGCCTGACCATCCA...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCAGAATCTCTCCCAACTaGGTCACAGTTCCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCRISPN*VTVPLR
Trigger: TCTCAGAGGAACTGTGACCAAGTTGGGAGAGATTCT...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATTGAGTTTTTCCCGCTaGCGGATCAATTCCACGAGC +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVLSFSR*RINSTS
Trigger: GCTCGTGGAATTGATCCGCAAGCGGGAAAAACTCAA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAAGCTGCTCCAAGGTTTaGCGAAGGAGGATGAGGAAA +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVSCSKV*RRRMRK
Trigger: TTTCCTCATCCTCCTTCGCAAAACCTTGGAGCAGCT...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATCCTTGGCGTTATACTaGAGGCAGTTGCTGACGATG +
Preference number: 5 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRSLALY*RQLLTM
Trigger: CATCGTCAGCAACTGCCTCAAGTATAACGCCAAGGA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGTCCTTGGCGTTATACTaGAGGCAGTTGCTGACGATG +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQSLALY*RQLLTM
Trigger: CATCGTCAGCAACTGCCTCAAGTATAACGCCAAGGA...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGTCCAGCATCTTCTCCTaGTCTAGGTCCTGGTTCACA +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQSSIFS*SRSWFT
Trigger: TGTGAACCAGGACCTAGACAAGGAGAAGATGCTGGA...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTAACAGGGCACTATAGGTaGGGCTGTGTTGAGCAGTAT +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVTGHYR*GCVEQY
Trigger: ATACTGCTCAACACAGCCCAACCTATAGTGCCCTGT...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS TCA 90 bp TGTGGTCTAGGTAGTCAGGTACCTCAGACAGAGGGACCGGCTCGCTaGAGATGTTGCCTGTGTCCTTCTCTTGGAGCTGCTCCAAGGTTT +
Preference number: 5 (lower is better)
Translates to: CGLGSQVPQTEGPAR*RCCLCPSLGAAPRF
Trigger: AAACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTCTGAGGTACCTGACTACCTAGACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000682208.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684206.1
ENST00000684333.1
CDS CCA 90 bp GTAACTCTTGTAGACCTTTCGGCAGGTCTCCACCGGGCACTCGTATaGTGGCTTAGTCGCCCGCAAGTTGTGGCAGAAAGTCTTCACATC +
Preference number: 5 (lower is better)
Translates to: VTLVDLSAGLHRALV*WLSRPQVVAESLHI
Trigger: GATGTGAAGACTTTCTGCCACAACTTGCGGGCGACTAAGCCACCATACGAGTGCCCGGTGGAGACCTGCCGAAAGGTCTACAAGAGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGCCCTTTTTCTTGTGCTaGCGGAGTGGAGTTTGTTGT +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQPFFLC*RSGVCC
Trigger: ACAACAAACTCCACTCCGCAAGCACAAGAAAAAGGG...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGACCCTTTTTCTTGTGCTaGCGGAGTGGAGTTTGTTGT +
Preference number: 5 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRPFFLC*RSGVCC
Trigger: ACAACAAACTCCACTCCGCAAGCACAAGAAAAAGGG...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATGGCACTCACCATCATaGCAGATACAGCAAACAGCA +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVWHSPS*QIQQTA
Trigger: TGCTGTTTGCTGTATCTGCAATGATGGTGAGTGCCA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGAGAATCTCTCCCAACTaGGTCACAGTTCCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQRISPN*VTVPLR
Trigger: TCTCAGAGGAACTGTGACCAAGTTGGGAGAGATTCT...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp TCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCCATTGCTGACGATGAGGTaGAAGTCCTCCTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: SPETGPKTRNESVQRPVPLLTMR*KSSSKS
Trigger: TGATTTTGAGGAGGACTTCAACCTCATCGTCAGCAA...TGGCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS TCA 90 bp GTACTTCGTCCAATTCGGTTACCTCAGACAGAGGGACCGGCTCGCTaGAGATGTTGCCTGTGTCCTTCTCTTGGAGCTGCTCCAAGGTTT +
Preference number: 5 (lower is better)
Translates to: VLRPIRLPQTEGPAR*RCCLCPSLGAAPRF
Trigger: AAACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTCTGAGGTAACCGAATTGGACGAAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383829.7
ENST00000424362.7
ENST00000672515.2
ENST00000682980.1
ENST00000684199.1
ENST00000684223.1
CDS TCA 90 bp ACCGAAGCACAAACAAGCTCTCCTCTTTCCAAGCTGGGTCCCGGGTaGATGGTTCCCAAAGTAGCACAGCGAATCAGCAATCTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: TEAQTSSPLSKLGPG*MVPKVAQRISNLPL
Trigger: CAAGGGGAGATTGCTGATTCGCTGTGCTACTTTGGGAACCATTCACCCGGGACCCAGCTTGGAAAGAGGAGAGCTTGTTTGTGCTTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426583.2
ENST00000684199.1
CDS CCA 90 bp ACTCTTGTAGACCTTTCGGCAGGTCTCCACCGGGCACTCGTATGGTaGCTTAGTCGCCCGCAAGTTGTGGCAGAAAGTCTTCACATCAAA +
Preference number: 5 (lower is better)
Translates to: TLVDLSAGLHRALVW*LSRPQVVAESLHIK
Trigger: TTTGATGTGAAGACTTTCTGCCACAACTTGCGGGCGACTAAGCCACCATACGAGTGCCCGGTGGAGACCTGCCGAAAGGTCTACAAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS-3UTR CAA 90 bp TGGGCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTATCCTTGTTCTTATGTTaGCCTGACTTGGGAGTAGCA +
Preference number: 5 (lower is better)
Translates to: WALPLLALNCHWPLECSVSLFLC*PDLGVA
Trigger: TGCTACTCCCAAGTCAGGCAAACATAAGAACAAGGA...TACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATCCTTGTTCTTATGTTaGCCTGACTTGGGAGTAGCA +
Preference number: 5 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRSLFLC*PDLGVA
Trigger: TGCTACTCCCAAGTCAGGCAAACATAAGAACAAGGA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp CCCACCCAGCTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGATTGCTGACGATGAGGTaGAAGTCCTCCTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: PTQLPLRLAPRPEMSQCRLLTMR*KSSSKS
Trigger: TGATTTTGAGGAGGACTTCAACCTCATCGTCAGCAA...TCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAGCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS-3UTR CAA 90 bp GCCCTCCCTCTCCTTGCGCTGAACTGCCATTGGCCCTTGGAGTGTTCTGTACAGGTCTTCGGGTTCTTTTaGGAGAACAGAACTGAGGTT +
Preference number: 5 (lower is better)
Translates to: ALPLLALNCHWPLECSVQVFGFF*ENRTEV
Trigger: AACCTCAGTTCTGTTCTCCAAAAAGAACCCGAAGAC...CTGTACAGAACACTCCAAGGGCCAATGGCAGTTCAGCGCAAGGAGAGGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383829.7
CDS-3UTR CAA 90 bp CTTCCCCTGAGACTGGCCCCAAGACCAGAAATGAGTCAGTGCAGAGGCCGGTGCATAGGTTGGGCTGTGTaGAGCAGTATCAATCACTAT +
Preference number: 5 (lower is better)
Translates to: LPLRLAPRPEMSQCRGRCIGWAV*SSINHY
Trigger: ATAGTGATTGATACTGCTCAACACAGCCCAACCTAT...GCACCGGCCTCTGCACTGACTCATTTCTGGTCTTGGGGCCAGTCTCAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383829.7
ENST00000433861.6
CDS TCA 90 bp TCTGGCAGCTTGGGAGTGGTGCTCGCAGAAACATTGTGGTGGTGGTaGTGGTTGGAGTCCTTGCGCTTCTCCTTGTTCTTATGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: SGSLGVVLAETLWWW*WLESLRFSLFLCLP
Trigger: AGGCAAACATAAGAACAAGGAGAAGCGCAAGGACTCCAACCATCACCACCACCACAATGTTTCTGCGAGCACCACTCCCAAGCTGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS TCA 90 bp CAGTTCTTATCCTCAGAATCTCTCCCAACTTGGTCACAGTTCCTCTaGGATTGCAGGTGTGTCTGCAGGCGACGTAGCAATGGGACCCCA +
Preference number: 5 (lower is better)
Translates to: QFLSSESLPTWSQFL*DCRCVCRRRSNGTP
Trigger: TGGGGTCCCATTGCTACGTCGCCTGCAGACACACCTGCAATCTCAGAGGAACTGTGACCAAGTTGGGAGAGATTCTGAGGATAAGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS TCA 90 bp CTGTGTCCTTCTCTTGGAGCTGCTCCAAGGTTTTGCGAAGGAGGATaGGGAAAGGAGTCAGCTGCATCTCCATGGCAATCTGCTGAACCT +
Preference number: 5 (lower is better)
Translates to: LCPSLGAAPRFCEGG*GKESAASPWQSAEP
Trigger: AGGTTCAGCAGATTGCCATGGAGATGCAGCTGACTCCTTTCCTCATCCTCCTTCGCAAAACCTTGGAGCAGCTCCAAGAGAAGGACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS TCA 90 bp TTACTTCGTCCAATTCGGTTACCTCAGACAGAGGGACCGGCTCGCTaGAGATGTTGCCTGTGTCCTTCTCTTGGAGCTGCTCCAAGGTTT +
Preference number: 5 (lower is better)
Translates to: LLRPIRLPQTEGPAR*RCCLCPSLGAAPRF
Trigger: AAACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTCTGAGGTAACCGAATTGGACGAAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684608.1
CDS CCA 90 bp GCTTGGGAGTGGTGCTCGCAGAAACATTGTGGTGGTGGTGATGGTTaGAGTCCTTGCGCTTCTCCTTGTTCTTATGTTTGCCTGACTTGG +
Preference number: 5 (lower is better)
Translates to: AWEWCSQKHCGGGDG*SPCASPCSYVCLTW
Trigger: CCAAGTCAGGCAAACATAAGAACAAGGAGAAGCGCAAGGACTCCAACCATCACCACCACCACAATGTTTCTGCGAGCACCACTCCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CCA 90 bp ATCACAGAAAGAATTCATTTACTTTTGAGGTCTTTATGGGGAGCCTaGCCCTGGTACTGGGTAGGAGATGTACGGCCACCTCGAGTCCGG +
Preference number: 5 (lower is better)
Translates to: ITERIHLLLRSLWGA*PWYWVGDVRPPRVR
Trigger: CCGGACTCGAGGTGGCCGTACATCTCCTACCCAGTACCAGGGCCAGGCTCCCCATAAAGACCTCAAAAGTAAATGAATTCTTTCTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420291.3
CDS CCA 90 bp AGGCTGCAGTCATTACGGTATACCAAGAAACTCTTCTTCACTGGTTaGTTTCCACCGCTGAAGCCATTGGCTGGTAAGTTCTCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: RLQSLRYTKKLFFTG*FPPLKPLAGKFSWG
Trigger: CCCCCAAGAGAACTTACCAGCCAATGGCTTCAGCGGTGGAAACCAACCAGTGAAGAAGAGTTTCTTGGTATACCGTAATGACTGCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684573.1
CDS TCA 90 bp GCAGCTTGTATTACATTTGAGCTGTTCACCCACTCACACATCAACTaGGTGACTACCAAGTGCCAGGCCCTAAGGGTACAAACACGAACG +
Preference number: 5 (lower is better)
Translates to: AACITFELFTHSHIN*VTTKCQALRVQTRT
Trigger: CGTTCGTGTTTGTACCCTTAGGGCCTGGCACTTGGTAGTCACTCAGTTGATGTGTGAGTGGGTGAACAGCTCAAATGTAATACAAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684199.1
CDS TCA 90 bp TGTCCTCCCAAGGCTTTTCCTCCTCAAGAACTTAGAGAGTATGTCTaGAGTGGGGACAGAGAGGGTATCATGCTACTAGAACTGCAATGC +
Preference number: 5 (lower is better)
Translates to: CPPKAFPPQELREYV*SGDREGIMLLELQC
Trigger: GCATTGCAGTTCTAGTAGCATGATACCCTCTCTGTCCCCACTTCAGACATACTCTCTAAGTTCTTGAGGAGGAAAAGCCTTGGGAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683986.1
CDS CCA 90 bp AATCACTGGATCACAGAAAGAATTCATTTACTTTTGAGGTCTTTATaGGGAGCCTGGCCCTGGTACTGGGTAGGAGATGTACGGCCACCT +
Preference number: 5 (lower is better)
Translates to: NHWITERIHLLLRSL*GAWPWYWVGDVRPP
Trigger: AGGTGGCCGTACATCTCCTACCCAGTACCAGGGCCAGGCTCCCCATAAAGACCTCAAAAGTAAATGAATTCTTTCTGTGATCCAGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420291.3
CDS TCA 90 bp GAACCCCATGGTGGAACATACCTTCTCGGGGCATCTTTGGATCAATaGTCTGAGGATATAATAAGAGCCCAGTTTGGTTCAGTCCATGTC +
Preference number: 5 (lower is better)
Translates to: EPHGGTYLLGASLDQ*SEDIIRAQFGSVHV
Trigger: GACATGGACTGAACCAAACTGGGCTCTTATTATATCCTCAGATCATTGATCCAAAGATGCCCCGAGAAGGTATGTTCCACCATGGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683986.1
CDS CCA 90 bp GGGTGGGTGGCTAATGCTTTAGCGTTGGACTCCTGCAGAAATCACTaGATCACAGAAAGAATTCATTTACTTTTGAGGTCTTTATGGGGA +
Preference number: 5 (lower is better)
Translates to: GWVANALALDSCRNH*ITERIHLLLRSLWG
Trigger: TCCCCATAAAGACCTCAAAAGTAAATGAATTCTTTCTGTGATCCAGTGATTTCTGCAGGAGTCCAACGCTAAAGCATTAGCCACCCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420291.3
ENST00000684199.1
CDS GCA 72 bp TCCGTCGGCCGCCGCCCGTTTCGCGAGCCCCCAAGATaGCCGGTCTCGGGACCGGGCGCTGCTGGAACAATG +
Preference number: 6 (lower is better)
Translates to: SVGRRPFREPPR*PVSGPGAAGTM
Trigger: CATTGTTCCAGCAGCGCCCGGTCCCGAGACCGGGCATCTTGGGGGCTCGCGAAACGGGCGGCGGCCGACGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000433861.6
ENST00000683639.1
ENST00000683743.1
ENST00000684206.1
ENST00000684333.1
ENST00000684608.1
CDS GCA 72 bp CGAGCCCCCAAGATGCCCGGTCTCGGGACCGGGCGCTaGTGGAACAATGGAGGCTCCCAGAGGCAGCGCGAG +
Preference number: 6 (lower is better)
Translates to: RAPKMPGLGTGR*WNNGGSQRQRE
Trigger: CTCGCGCTGCCTCTGGGAGCCTCCATTGTTCCAGCAGCGCCCGGTCCCGAGACCGGGCATCTTGGGGGCTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000433861.6
ENST00000683639.1
ENST00000683743.1
ENST00000684206.1
ENST00000684333.1
ENST00000684608.1
CDS GCA 72 bp CTGGGCCCCGGCAGTGCCCGCAGCCCACTCTCCGGATaGGGCGGCGTTTCCCCTTTGTGGAAGTGTAACAAG +
Preference number: 6 (lower is better)
Translates to: LGPGSARSPLSG*GGVSPLWKCNK
Trigger: CTTGTTACACTTCCACAAAGGGGAAACGCCGCCGCATCCGGAGAGTGGGCTGCGGGCACTGCCGGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684199.1
CDS TCA 72 bp ACCCTCGCTGTGGGACAGGGCAGGCAGTCGGCGTGCTaGACCTGGAGGCGTGTGGATGTCGCAGTAGGCTGT +
Preference number: 6 (lower is better)
Translates to: TLAVGQGRQSAC*TWRRVDVAVGC
Trigger: ACAGCCTACTGCGACATCCACACGCCTCCAGGTTCAGCACGCCGACTGCCTGCCCTGTCCCACAGCGAGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS GCA 72 bp TGCGGTGGACGCGGCCATGCAAGTCCACCTCCACCATaGGCTGGGCCTGTGCATAGCTCATCACCTCACGGC +
Preference number: 6 (lower is better)
Translates to: CGGRGHASPPPP*AGPVHSSSPHG
Trigger: GCCGTGAGGTGATGAGCTATGCACAGGCCCAGCGCATGGTGGAGGTGGACTTGCATGGCCGCGTCCACCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CCA 72 bp GCTGGCGAGACCCTGACACTGGGTCCCCAGCATCCCTaGCCTTGGGCAAGGGAACTTACTGCTGTGGCCCAC +
Preference number: 6 (lower is better)
Translates to: AGETLTLGPQHP*PWARELTAVAH
Trigger: GTGGGCCACAGCAGTAAGTTCCCTTGCCCAAGGCCAGGGATGCTGGGGACCCAGTGTCAGGGTCTCGCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672515.2
ENST00000682208.1
ENST00000683639.1
ENST00000683986.1
CDS CAA 90 bp GGGGCCTCCTCGGGGGCTTCCTCATCCTCTGACACCACATCCAGGTaGTCAAAGATGCTGATGCGGTGGACGCGGCCATGCAAGTCCACC +
Preference number: 6 (lower is better)
Translates to: GASSGASSSSDTTSR*SKMLMRWTRPCKST
Trigger: GGTGGACTTGCATGGCCGCGTCCACCGCATCAGCATCTTTGACAACCTGGATGTGGTGTCAGAGGATGAGGAAGCCCCCGAGGAGGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS TCA 72 bp GCGTGTGGATGTCGCAGTAGGCTGTCTTGCGGACACTaGAAGAGGTGCCGTTGGCGCCTGTCTCCCGCACAG +
Preference number: 6 (lower is better)
Translates to: ACGCRSRLSCGH*KRCRWRLSPAQ
Trigger: CTGTGCGGGAGACAGGCGCCAACGGCACCTCTTTCAGTGTCCGCAAGACAGCCTACTGCGACATCCACACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS TCA 72 bp TGCGGCGGCGTTTCCCCTTTGTGGAAGTGTAACAAGTaGAACAAGGCTCCCCGCCTGCCACTAGCCCGGGCA +
Preference number: 6 (lower is better)
Translates to: CGGVSPLWKCNK*NKAPRLPLARA
Trigger: TGCCCGGGCTAGTGGCAGGCGGGGAGCCTTGTTTCACTTGTTACACTTCCACAAAGGGGAAACGCCGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684199.1
CDS CAA 72 bp CTGCCACTAGCCCGGGCAGCCCCGAAAGATACACTGTaGCCCCAGGATGCCTGCTGGGAAGCAATGCACTGT +
Preference number: 6 (lower is better)
Translates to: LPLARAAPKDTL*PQDACWEAMHC
Trigger: ACAGTGCATTGCTTCCCAGCAGGCATCCTGGGGCAACAGTGTATCTTTCGGGGCTGCCCGGGCTAGTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684199.1
CDS TCA 72 bp CCCATTCTGGGCCCTCAGACAGAGGGACCGGCTCGCTaGAGATGTTGCCTGTGTCCTTCTCTTGGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: PILGPQTEGPAR*RCCLCPSLGAA
Trigger: AGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTCTGAGGGCCCAGAATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673551.2
CDS GCA 72 bp TGTCCTCTGGGAAAGTGCCCCGAGAGAAGGAGGGTTTaGCCCGGCCTTGTTTTGAGGGCGTTGTGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: CPLGKCPERRRV*PGLVLRALCCG
Trigger: TCCACAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCTTCTCTCGGGGCACTTTCCCAGAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683986.1
CDS CCA 72 bp GACACCACATCCAGGTTGTCAAAGATGCTGATGCGGTaGACGCGGCCATGCAAGTCCACCTCCACCATGCGC +
Preference number: 6 (lower is better)
Translates to: DTTSRLSKMLMR*TRPCKSTSTMR
Trigger: GCGCATGGTGGAGGTGGACTTGCATGGCCGCGTCCACCGCATCAGCATCTTTGACAACCTGGATGTGGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CAA 72 bp TCGGGGGCTTCCTCATCCTCTGACACCACATCCAGGTaGTCAAAGATGCTGATGCGGTGGACGCGGCCATGC +
Preference number: 6 (lower is better)
Translates to: SGASSSSDTTSR*SKMLMRWTRPC
Trigger: GCATGGCCGCGTCCACCGCATCAGCATCTTTGACAACCTGGATGTGGTGTCAGAGGATGAGGAAGCCCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CAA 72 bp GTTCCCAAAGTAGCACAGCGAATCAGCAATCTCCCCTaGGAACCCGGCAGCAGAGGCACAGGCGAGGGAGAC +
Preference number: 6 (lower is better)
Translates to: VPKVAQRISNLP*EPGSRGTGEGD
Trigger: GTCTCCCTCGCCTGTGCCTCTGCTGCCGGGTTCCAAGGGGAGATTGCTGATTCGCTGTGCTACTTTGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426583.2
ENST00000684199.1
CDS CAA 72 bp GGGCCCTCAGACAGAGGGACCGGCTCGCTGAAGATGTaGCCTGTGTCCTTCTCTTGGAGCTGCTCCAAGGTT +
Preference number: 6 (lower is better)
Translates to: GPSDRGTGSLKM*PVSFSWSCSKV
Trigger: AACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTCTGAGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673551.2
CDS CAA 90 bp TCCCATTCTGGGCCCTCAGACAGAGGGACCGGCTCGCTGAAGATGTaGCCTGTGTCCTTCTCTTGGAGCTGCTCCAAGGTTTTGCGAAGG +
Preference number: 6 (lower is better)
Translates to: SHSGPSDRGTGSLKM*PVSFSWSCSKVLRR
Trigger: CCTTCGCAAAACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTCTGAGGGCCCAGAATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673551.2
CDS CAA 90 bp CTGGGAAAGTGCCCCGAGAGAAGGAGGGTTTGCCCCGGCCTTGTTTaGAGGGCGTTGTGCTGTGGACAAGACAATGGGAGCTCAGCTCAA +
Preference number: 6 (lower is better)
Translates to: LGKCPERRRVCPGLV*RALCCGQDNGSSAQ
Trigger: TTGAGCTGAGCTCCCATTGTCTTGTCCACAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCTTCTCTCGGGGCACTTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683986.1
CDS TCA 72 bp AGGCCCCTGAGCCCCGTTGTTTGCAAATGTAGCAGGTaGGCTTCCAGCGAGCTGGTGGGATGTGCTCAATGC +
Preference number: 6 (lower is better)
Translates to: RPLSPVVCKCSR*ASSELVGCAQC
Trigger: GCATTGAGCACATCCCACCAGCTCGCTGGAAGCTCACCTGCTACATTTGCAAACAACGGGGCTCAGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS TCA 72 bp GCCGCTTCAGTGTCCAGTAGCTGTGCAGCCTCTGCATaGACTGGCTCTTCCTTTGGATGGTCAGGCGGTTGG +
Preference number: 6 (lower is better)
Translates to: AASVSSSCAASA*TGSSFGWSGGW
Trigger: CCAACCGCCTGACCATCCAAAGGAAGAGCCAGTTCATGCAGAGGCTGCACAGCTACTGGACACTGAAGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS GCA 72 bp GCTCCCGATAGACCACCTCTGGCAGCTTGGGAGTGGTaGTCGCAGAAACATTGTGGTGGTGGTGATGGTTGG +
Preference number: 6 (lower is better)
Translates to: APDRPPLAAWEW*SQKHCGGGDGW
Trigger: CCAACCATCACCACCACCACAATGTTTCTGCGAGCACCACTCCCAAGCTGCCAGAGGTGGTCTATCGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS GCA 72 bp AGGTGCTGCTGCCCGCTTCTCTGCCAGGATCTTCCGTaGCTTCTTCATTTTGATCCGGGACTTGGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: RCCCPLLCQDLP*LLHFDPGLGLG
Trigger: GCCAAGGCCAAGTCCCGGATCAAAATGAAGAAGGCACGGAAGATCCTGGCAGAGAAGCGGGCAGCAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS GCA 72 bp TCTCTTCAAGGTCCCCATCTAGTCCTGGCCCAGACCTaGAGCAGGGGTCCAACTGGGAGAGGAACAGAGAGA +
Preference number: 6 (lower is better)
Translates to: SLQGPHLVLAQT*SRGPTGRGTER
Trigger: TCTCTCTGTTCCTCTCCCAGTTGGACCCCTGCTGCAGGTCTGGGCCAGGACTAGATGGGGACCTTGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684608.1
CDS CCA 72 bp GACCTTTCGGCAGGTCTCCACCGGGCACTCGTATGGTaGCTTAGTCGCCCGCAAGTTGTGGCAGAAAGTCTT +
Preference number: 6 (lower is better)
Translates to: DLSAGLHRALVW*LSRPQVVAESL
Trigger: AAGACTTTCTGCCACAACTTGCGGGCGACTAAGCCACCATACGAGTGCCCGGTGGAGACCTGCCGAAAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CCA 72 bp GTAGACCTTTCGGCAGGTCTCCACCGGGCACTCGTATaGTGGCTTAGTCGCCCGCAAGTTGTGGCAGAAAGT +
Preference number: 6 (lower is better)
Translates to: VDLSAGLHRALV*WLSRPQVVAES
Trigger: ACTTTCTGCCACAACTTGCGGGCGACTAAGCCACCATACGAGTGCCCGGTGGAGACCTGCCGAAAGGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CCA 72 bp CCAGCTCCCGATAGACCACCTCTGGCAGCTTGGGAGTaGTGCTCGCAGAAACATTGTGGTGGTGGTGATGGT +
Preference number: 6 (lower is better)
Translates to: PAPDRPPLAAWE*CSQKHCGGGDG
Trigger: ACCATCACCACCACCACAATGTTTCTGCGAGCACCACTCCCAAGCTGCCAGAGGTGGTCTATCGGGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CCA 72 bp CCTGTTCCAGCTCCCGATAGACCACCTCTGGCAGCTTaGGAGTGGTGCTCGCAGAAACATTGTGGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: PVPAPDRPPLAA*EWCSQKHCGGG
Trigger: ACCACCACCACAATGTTTCTGCGAGCACCACTCCCAAGCTGCCAGAGGTGGTCTATCGGGAGCTGGAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CCA 72 bp AGGGGTGTCCTGTTCCAGCTCCCGATAGACCACCTCTaGCAGCTTGGGAGTGGTGCTCGCAGAAACATTGTG +
Preference number: 6 (lower is better)
Translates to: RGVLFQLPIDHL*QLGSGARRNIV
Trigger: CACAATGTTTCTGCGAGCACCACTCCCAAGCTGCCAGAGGTGGTCTATCGGGAGCTGGAACAGGACACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CCA 72 bp CTTCTCGATGTACCGGTAATAGGAAGTTGGCCGGGGTaGGGCATCAGGGGTGTCCTGTTCCAGCTCCCGATA +
Preference number: 6 (lower is better)
Translates to: LLDVPVIGSWPG*GIRGVLFQLPI
Trigger: TATCGGGAGCTGGAACAGGACACCCCTGATGCCCCACCCCGGCCAACTTCCTATTACCGGTACATCGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CCA 72 bp GGTTTGCCCCGGCCTTGTTTTGAGGGCGTTGTGCTGTaGACAAGACAATGGGAGCTCAGCTCAAAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: GLPRPCFEGVVL*TRQWELSSKEG
Trigger: CCCCTCCTTTGAGCTGAGCTCCCATTGTCTTGTCCACAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683986.1
CDS CAA 90 bp CAGGTCTCCACCGGGCACTCGTATGGTGGCTTAGTCGCCCGCAAGTaGTGGCAGAAAGTCTTCACATCAAAGTCCACCCCCATGCTGTCA +
Preference number: 6 (lower is better)
Translates to: QVSTGHSYGGLVARK*WQKVFTSKSTPMLS
Trigger: TGACAGCATGGGGGTGGACTTTGATGTGAAGACTTTCTGCCACAACTTGCGGGCGACTAAGCCACCATACGAGTGCCCGGTGGAGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS TCA 72 bp CATCCTCTGACACCACATCCAGGTTGTCAAAGATGCTaGTGCGGTGGACGCGGCCATGCAAGTCCACCTCCA +
Preference number: 6 (lower is better)
Translates to: HPLTPHPGCQRC*CGGRGHASPPP
Trigger: TGGAGGTGGACTTGCATGGCCGCGTCCACCGCATCAGCATCTTTGACAACCTGGATGTGGTGTCAGAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS TCA 72 bp GGTAGTCAGGTACCTCAGACAGAGGGACCGGCTCGCTaGAGATGTTGCCTGTGTCCTTCTCTTGGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: GSQVPQTEGPAR*RCCLCPSLGAA
Trigger: AGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTCTGAGGTACCTGACTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000682208.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684206.1
ENST00000684333.1
CDS GCA 72 bp AGGAGGGTTTGCCCCGGCCTTGTTTTGAGGGCGTTGTaGTGTGGACAAGACAATGGGAGCTCAGCTCAAAGG +
Preference number: 6 (lower is better)
Translates to: RRVCPGLVLRAL*CGQDNGSSAQR
Trigger: CCTTTGAGCTGAGCTCCCATTGTCTTGTCCACAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683986.1
CDS CCA 72 bp GCCCCGAAAGATACACTGTTGCCCCAGGATGCCTGCTaGGAAGCAATGCACTGTCAGTTCTCCCAACTGGAG +
Preference number: 6 (lower is better)
Translates to: APKDTLLPQDAC*EAMHCQFSQLE
Trigger: CTCCAGTTGGGAGAACTGACAGTGCATTGCTTCCCAGCAGGCATCCTGGGGCAACAGTGTATCTTTCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684199.1
CDS CAA 72 bp ACCGGGCACTCGTATGGTGGCTTAGTCGCCCGCAAGTaGTGGCAGAAAGTCTTCACATCAAAGTCCACCCCC +
Preference number: 6 (lower is better)
Translates to: TGHSYGGLVARK*WQKVFTSKSTP
Trigger: GGGGGTGGACTTTGATGTGAAGACTTTCTGCCACAACTTGCGGGCGACTAAGCCACCATACGAGTGCCCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CAA 72 bp GGTACCTCAGACAGAGGGACCGGCTCGCTGAAGATGTaGCCTGTGTCCTTCTCTTGGAGCTGCTCCAAGGTT +
Preference number: 6 (lower is better)
Translates to: GTSDRGTGSLKM*PVSFSWSCSKV
Trigger: AACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTCTGAGGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000682208.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684206.1
ENST00000684333.1
CDS TCA 72 bp CCAATTCGGTTACCTCAGACAGAGGGACCGGCTCGCTaGAGATGTTGCCTGTGTCCTTCTCTTGGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: PIRLPQTEGPAR*RCCLCPSLGAA
Trigger: AGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTCTGAGGTAACCGAATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383829.7
ENST00000424362.7
ENST00000672515.2
ENST00000682980.1
ENST00000684199.1
ENST00000684223.1
ENST00000684608.1
CDS CCA 72 bp GGGCACTCGTATGGTGGCTTAGTCGCCCGCAAGTTGTaGCAGAAAGTCTTCACATCAAAGTCCACCCCCATG +
Preference number: 6 (lower is better)
Translates to: GHSYGGLVARKL*QKVFTSKSTPM
Trigger: CATGGGGGTGGACTTTGATGTGAAGACTTTCTGCCACAACTTGCGGGCGACTAAGCCACCATACGAGTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CCA 72 bp ACCGGCTCGCTGAAGATGTTGCCTGTGTCCTTCTCTTaGAGCTGCTCCAAGGTTTTGCGAAGGAGGATGAGG +
Preference number: 6 (lower is better)
Translates to: TGSLKMLPVSFS*SCSKVLRRRMR
Trigger: CCTCATCCTCCTTCGCAAAACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CAA 72 bp GACCGGCTCGCTGAAGATGTTGCCTGTGTCCTTCTCTaGGAGCTGCTCCAAGGTTTTGCGAAGGAGGATGAG +
Preference number: 6 (lower is better)
Translates to: DRLAEDVACVLL*ELLQGFAKEDE
Trigger: CTCATCCTCCTTCGCAAAACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CAA 72 bp GTTACCTCAGACAGAGGGACCGGCTCGCTGAAGATGTaGCCTGTGTCCTTCTCTTGGAGCTGCTCCAAGGTT +
Preference number: 6 (lower is better)
Translates to: VTSDRGTGSLKM*PVSFSWSCSKV
Trigger: AACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTCTGAGGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383829.7
ENST00000424362.7
ENST00000672515.2
ENST00000682980.1
ENST00000684199.1
ENST00000684223.1
ENST00000684608.1
CDS CAA 72 bp AGAAGGAGGGTTTGCCCCGGCCTTGTTTTGAGGGCGTaGTGCTGTGGACAAGACAATGGGAGCTCAGCTCAA +
Preference number: 6 (lower is better)
Translates to: RRRVCPGLVLRA*CCGQDNGSSAQ
Trigger: TTGAGCTGAGCTCCCATTGTCTTGTCCACAGCACAACGCCCTCAAAACAAGGCCGGGGCAAACCCTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683986.1
CDS CAA 90 bp GCCAGGATCTTCCGTGCCTTCTTCATTTTGATCCGGGACTTGGCCTaGGCCTTCTTGACTTTCTCTGAGCTCCAGCCCTTACCCTCATCC +
Preference number: 6 (lower is better)
Translates to: ARIFRAFFILIRDLA*AFLTFSELQPLPSS
Trigger: GGATGAGGGTAAGGGCTGGAGCTCAGAGAAAGTCAAGAAGGCCAAGGCCAAGTCCCGGATCAAAATGAAGAAGGCACGGAAGATCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CAA 90 bp AGACAGAGGGACCGGCTCGCTGAAGATGTTGCCTGTGTCCTTCTCTaGGAGCTGCTCCAAGGTTTTGCGAAGGAGGATGAGGAAAGGAGT +
Preference number: 6 (lower is better)
Translates to: RQRDRLAEDVACVLL*ELLQGFAKEDEERS
Trigger: ACTCCTTTCCTCATCCTCCTTCGCAAAACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CAA 90 bp TCCAATTCGGTTACCTCAGACAGAGGGACCGGCTCGCTGAAGATGTaGCCTGTGTCCTTCTCTTGGAGCTGCTCCAAGGTTTTGCGAAGG +
Preference number: 6 (lower is better)
Translates to: SNSVTSDRGTGSLKM*PVSFSWSCSKVLRR
Trigger: CCTTCGCAAAACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTCTGAGGTAACCGAATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383829.7
ENST00000424362.7
ENST00000672515.2
ENST00000682980.1
ENST00000684199.1
ENST00000684223.1
ENST00000684608.1
CDS GCA 72 bp TTCTCCAGTCGGTCCATTAGGTACTCAAAGATCTCCTaGGGGATGGGACTTACACCCTCTGTCTTCCGACGC +
Preference number: 6 (lower is better)
Translates to: FSSRSIRYSKIS*GMGLTPSVFRR
Trigger: GCGTCGGAAGACAGAGGGTGTAAGTCCCATCCCGCAGGAGATCTTTGAGTACCTAATGGACCGACTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS GCA 72 bp ATACACTGTTGCCCCAGGATGCCTGCTGGGAAGCAATaGACTGTCAGTTCTCCCAACTGGAGTTGCCAGAGA +
Preference number: 6 (lower is better)
Translates to: IHCCPRMPAGKQ*TVSSPNWSCQR
Trigger: TCTCTGGCAACTCCAGTTGGGAGAACTGACAGTGCATTGCTTCCCAGCAGGCATCCTGGGGCAACAGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684199.1
CDS CCA 72 bp TGTCTAGGTCCTGGTTCACACCCAGAGGAACCAGCTTaGTCCTGGGCAGCCACAGGTTCGTTTGTTGTCAAA +
Preference number: 6 (lower is better)
Translates to: CLGPGSHPEEPA*SWAATGSFVVK
Trigger: TTTGACAACAAACGAACCTGTGGCTGCCCAGGACCAAGCTGGTTCCTCTGGGTGTGAACCAGGACCTAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457855.2
CDS CAA 90 bp CAGTGTCCAGTAGCTGTGCAGCCTCTGCATGAACTGGCTCTTCCTTaGGATGGTCAGGCGGTTGGTGATTTTACTAAGCCTGTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: QCPVAVQPLHELALP*DGQAVGDFTKPVWW
Trigger: CCACCACACAGGCTTAGTAAAATCACCAACCGCCTGACCATCCAAAGGAAGAGCCAGTTCATGCAGAGGCTGCACAGCTACTGGACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CCA 72 bp GTCGGTCCATTAGGTACTCAAAGATCTCCTGCGGGATaGGACTTACACCCTCTGTCTTCCGACGCTCATTCA +
Preference number: 6 (lower is better)
Translates to: VGPLGTQRSPAG*DLHPLSSDAHS
Trigger: TGAATGAGCGTCGGAAGACAGAGGGTGTAAGTCCCATCCCGCAGGAGATCTTTGAGTACCTAATGGACCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CAA 72 bp CGCTTCTCTGCCAGGATCTTCCGTGCCTTCTTCATTTaGATCCGGGACTTGGCCTTGGCCTTCTTGACTTTC +
Preference number: 6 (lower is better)
Translates to: RFSARIFRAFFI*IRDLALAFLTF
Trigger: GAAAGTCAAGAAGGCCAAGGCCAAGTCCCGGATCAAAATGAAGAAGGCACGGAAGATCCTGGCAGAGAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CAA 90 bp CTGAAGATGTTGCCTGTGTCCTTCTCTTGGAGCTGCTCCAAGGTTTaGCGAAGGAGGATGAGGAAAGGAGTCAGCTGCATCTCCATGGCA +
Preference number: 6 (lower is better)
Translates to: LKMLPVSFSWSCSKV*RRRMRKGVSCISMA
Trigger: TGCCATGGAGATGCAGCTGACTCCTTTCCTCATCCTCCTTCGCAAAACCTTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CAA 90 bp TGGTTGGAGTCCTTGCGCTTCTCCTTGTTCTTATGTTTGCCTGACTaGGGAGTAGCAGCTGGTGTCTCAGTGTTCTCCTTGTTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: WLESLRFSLFLCLPD*GVAAGVSVFSLLLP
Trigger: TGGCAGCAACAAGGAGAACACTGAGACACCAGCTGCTACTCCCAAGTCAGGCAAACATAAGAACAAGGAGAAGCGCAAGGACTCCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS TCA 72 bp TTGGGAGTGGTGCTCGCAGAAACATTGTGGTGGTGGTaGTGGTTGGAGTCCTTGCGCTTCTCCTTGTTCTTA +
Preference number: 6 (lower is better)
Translates to: LGVVLAETLWWW*WLESLRFSLFL
Trigger: TAAGAACAAGGAGAAGCGCAAGGACTCCAACCATCACCACCACCACAATGTTTCTGCGAGCACCACTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS TCA 72 bp TCCTCGTCCACTAGCGCATTAGGGTCGCCTTTATTATaGCTCTCAAAGTACGACTCCTTCTCCAGTCGGTCC +
Preference number: 6 (lower is better)
Translates to: SSSTSALGSPLL*LSKYDSFSSRS
Trigger: GGACCGACTGGAGAAGGAGTCGTACTTTGAGAGTCATAATAAAGGCGACCCTAATGCGCTAGTGGACGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS TCA 72 bp CCCCATGCTGTCACATCTGTTGAACGAATAGCTGAATaGGGGGATCACCAGACTGAGAGCTCAGATGGGATG +
Preference number: 6 (lower is better)
Translates to: PHAVTSVERIAE*GDHQTESSDGM
Trigger: CATCCCATCTGAGCTCTCAGTCTGGTGATCCCCTCATTCAGCTATTCGTTCAACAGATGTGACAGCATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420291.3
ENST00000684199.1
CDS TCA 72 bp CAAACAAGCTCTCCTCTTTCCAAGCTGGGTCCCGGGTaGATGGTTCCCAAAGTAGCACAGCGAATCAGCAAT +
Preference number: 6 (lower is better)
Translates to: QTSSPLSKLGPG*MVPKVAQRISN
Trigger: ATTGCTGATTCGCTGTGCTACTTTGGGAACCATTCACCCGGGACCCAGCTTGGAAAGAGGAGAGCTTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426583.2
ENST00000684199.1
CDS CAA 72 bp TGCATGAACTGGCTCTTCCTTTGGATGGTCAGGCGGTaGGTGATTTTACTAAGCCTGTGTGGTGGGATGCAG +
Preference number: 6 (lower is better)
Translates to: CMNWLFLWMVRR*VILLSLCGGMQ
Trigger: CTGCATCCCACCACACAGGCTTAGTAAAATCACCAACCGCCTGACCATCCAAAGGAAGAGCCAGTTCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CAA 72 bp GTAGCTGTGCAGCCTCTGCATGAACTGGCTCTTCCTTaGGATGGTCAGGCGGTTGGTGATTTTACTAAGCCT +
Preference number: 6 (lower is better)
Translates to: VAVQPLHELALP*DGQAVGDFTKP
Trigger: AGGCTTAGTAAAATCACCAACCGCCTGACCATCCAAAGGAAGAGCCAGTTCATGCAGAGGCTGCACAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS CAA 90 bp AGCTGGATTCTGGTCCTGACTTTACCAGTCACAAGCTGTGTGACTTaGGCAAGTCTCTTAACCTCTCTGGGCCTACTTTTCCTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SWILVLTLPVTSCVT*ASLLTSLGLLFLSW
Trigger: CCAGGAGAGGAAAAGTAGGCCCAGAGAGGTTAAGAGACTTGCCAAAGTCACACAGCTTGTGACTGGTAAAGTCAGGACCAGAATCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497565.3
CDS TCA 72 bp CAGAGAACCTTGAGTTTGAGCCATCTTAATCTAGACTaGGATGGCTGCCACCCCACTTCCAACAGGGAAACC +
Preference number: 6 (lower is better)
Translates to: QRTLSLSHLNLD*DGCHPTSNRET
Trigger: GGTTTCCCTGTTGGAAGTGGGGTGGCAGCCATCTCAGTCTAGATTAAGATGGCTCAAACTCAAGGTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683986.1
CDS CAA 72 bp TCCTTGCGCTTCTCCTTGTTCTTATGTTTGCCTGACTaGGGAGTAGCAGCTGGTGTCTCAGTGTTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SLRFSLFLCLPD*GVAAGVSVFSL
Trigger: CAAGGAGAACACTGAGACACCAGCTGCTACTCCCAAGTCAGGCAAACATAAGAACAAGGAGAAGCGCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000383829.7
ENST00000420291.3
ENST00000424362.7
ENST00000426583.2
ENST00000433861.6
ENST00000457855.2
ENST00000672126.2
ENST00000672515.2
ENST00000673551.2
ENST00000682208.1
ENST00000682980.1
ENST00000683423.1
ENST00000683639.1
ENST00000683743.1
ENST00000684199.1
ENST00000684206.1
ENST00000684223.1
ENST00000684333.1
ENST00000684608.1
CDS TCA 72 bp GAGTCAGCTGCATCTCCATGGCAATCTGCTGAACCTTaGTCTAACATAGAAAAAGGCCGTCTCCCTTTTGAG +
Preference number: 6 (lower is better)
Translates to: ESAASPWQSAEP*SNIEKGRLPFE
Trigger: CTCAAAAGGGAGACGGCCTTTTTCTATGTTAGATCAAGGTTCAGCAGATTGCCATGGAGATGCAGCTGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684223.1
CDS GCA 72 bp AGGCCTCTCATTTTATACCTTTTAGAGAGAAGAGTCTaGCAGTCAGGACCTAGGGCTTCAGAGCTGGTTCTT +
Preference number: 6 (lower is better)
Translates to: RPLILYLLERRV*QSGPRASELVL
Trigger: AAGAACCAGCTCTGAAGCCCTAGGTCCTGACTGGCAGACTCTTCTCTCTAAAAGGTATAAAATGAGAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497565.3
CDS CAA 72 bp AGAAAGCTGAATGGGTGGGTGGCTAATGCTTTAGCGTaGGACTCCTGCAGAAATCACTGGATCACAGAAAGA +
Preference number: 6 (lower is better)
Translates to: RKLNGWVANALA*DSCRNHWITER
Trigger: TCTTTCTGTGATCCAGTGATTTCTGCAGGAGTCCAACGCTAAAGCATTAGCCACCCACCCATTCAGCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420291.3
ENST00000684199.1
CDS CCA 72 bp TCATTACGGTATACCAAGAAACTCTTCTTCACTGGTTaGTTTCCACCGCTGAAGCCATTGGCTGGTAAGTTC +
Preference number: 6 (lower is better)
Translates to: SLRYTKKLFFTG*FPPLKPLAGKF
Trigger: GAACTTACCAGCCAATGGCTTCAGCGGTGGAAACCAACCAGTGAAGAAGAGTTTCTTGGTATACCGTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684573.1
CDS CAA 90 bp AGGCCATGTAGAAAGCTGAATGGGTGGGTGGCTAATGCTTTAGCGTaGGACTCCTGCAGAAATCACTGGATCACAGAAAGAATTCATTTA +
Preference number: 6 (lower is better)
Translates to: RPCRKLNGWVANALA*DSCRNHWITERIHL
Trigger: TAAATGAATTCTTTCTGTGATCCAGTGATTTCTGCAGGAGTCCAACGCTAAAGCATTAGCCACCCACCCATTCAGCTTTCTACATGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420291.3
ENST00000684199.1
CDS TCA 72 bp AAGGCTTTTCCTCCTCAAGAACTTAGAGAGTATGTCTaGAGTGGGGACAGAGAGGGTATCATGCTACTAGAA +
Preference number: 6 (lower is better)
Translates to: KAFPPQELREYV*SGDREGIMLLE
Trigger: TTCTAGTAGCATGATACCCTCTCTGTCCCCACTTCAGACATACTCTCTAAGTTCTTGAGGAGGAAAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683986.1
CDS TCA 72 bp GGTCATTTAGTCAGTGACAGCAGCTTGTATTACATTTaGGCTGTTCACCCACTCACACATCAACTGAGTGAC +
Preference number: 6 (lower is better)
Translates to: GHLVSDSSLYYI*AVHPLTHQLSD
Trigger: GTCACTCAGTTGATGTGTGAGTGGGTGAACAGCTCAAATGTAATACAAGCTGCTGTCACTGACTAAATGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684199.1