Pregenerated sensors for BRMS1L (Homo sapiens)
Ensembl gene IDs: ENSG00000100916Ensembl transcript IDs: ENST00000216807.12, ENST00000547420.5, ENST00000548758.1, ENST00000551774.1, ENST00000552677.5
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATTCCCTGAGCCAGAACCATCCAGCTAAGTTGCTCCCAAATTCCTaGCCACTGAGACTGCTACCTTTGTACGAATTTGCATATTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: DSLSQNHPAKLLPNS*PLRLLPLYEFAYFP Trigger: AGGAAAATATGCAAATTCGTACAAAGGTAGCAGTCTCAGTGGCCAGGAATTTGGGAGCAACTTAGCTGGATGGTTCTGGCTCAGGGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| 3UTR GCA 90 bp | GCTCCCAAATTCCTGGCCACTGAGACTGCTACCTTTGTACGAATTTaGATATTTTCCTGTAAAGTTGCCAGCGGTTCCAAGTATTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: APKFLATETATFVRI*IFSCKVASGSKYSG Trigger: ACCAGAATACTTGGAACCGCTGGCAACTTTACAGGAAAATATGCAAATTCGTACAAAGGTAGCAGTCTCAGTGGCCAGGAATTTGGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| 3UTR CCA 90 bp | TGCCTATCCTCTTCAAGCCTTCTTATCTTCTCCTCTAGTTCACTCTaGACTGTATCATATAGCAACAGCTTTTCGCTCTCACAATGCTGG | + |
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Preference number: 1 (lower is better) Translates to: CLSSSSLLIFSSSSL*TVSYSNSFSLSQCW Trigger: CCAGCATTGTGAGAGCGAAAAGCTGTTGCTATATGATACAGTCCAGAGTGAACTAGAGGAGAAGATAAGAAGGCTTGAAGAGGATAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| 3UTR TCA 90 bp | GGAGTCATCCTACAGCCATTTAGTCTGTCCACAGCAGGAACCAATTaGAAGAATACTTCAATAGTTCTGGCGAAAAGTTATAAGATCCTG | + |
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Preference number: 1 (lower is better) Translates to: GVILQPFSLSTAGTN*KNTSIVLAKSYKIL Trigger: CAGGATCTTATAACTTTTCGCCAGAACTATTGAAGTATTCTTTCAATTGGTTCCTGCTGTGGACAGACTAAATGGCTGTAGGATGACTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| 3UTR CCA 90 bp | AGCTTAGATTTGCTTCCATCAGGCCTCTTAAACCAAACTTCATCATaGTTAATTGTTGTAATTACAGCACTTGTAGGACATTCATCTTTT | + |
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Preference number: 1 (lower is better) Translates to: SLDLLPSGLLNQTSS*LIVVITALVGHSSF Trigger: AAAAGATGAATGTCCTACAAGTGCTGTAATTACAACAATTAACCATGATGAAGTTTGGTTTAAGAGGCCTGATGGAAGCAAATCTAAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| 3UTR CAA 90 bp | ACTGCAACTTCTTGGGATTCCCTGAGCCAGAACCATCCAGCTAAGTaGCTCCCAAATTCCTGGCCACTGAGACTGCTACCTTTGTACGAA | + |
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Preference number: 2 (lower is better) Translates to: TATSWDSLSQNHPAK*LPNSWPLRLLPLYE Trigger: TTCGTACAAAGGTAGCAGTCTCAGTGGCCAGGAATTTGGGAGCAACTTAGCTGGATGGTTCTGGCTCAGGGAATCCCAAGAAGTTGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| 3UTR CAA 90 bp | CCAGCTAAGTTGCTCCCAAATTCCTGGCCACTGAGACTGCTACCTTaGTACGAATTTGCATATTTTCCTGTAAAGTTGCCAGCGGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: PAKLLPNSWPLRLLP*YEFAYFPVKLPAVP Trigger: TGGAACCGCTGGCAACTTTACAGGAAAATATGCAAATTCGTACAAAGGTAGCAGTCTCAGTGGCCAGGAATTTGGGAGCAACTTAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| 3UTR-3UTR GCA 90 bp | TCACTCTGGACTGTATCATATAGCAACAGCTTTTCGCTCTCACAATGCTGGCGACTCTCTATAGATTCCTaGTACCTTTGTACGAATTTG | + |
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Preference number: 2 (lower is better) Translates to: SLWTVSYSNSFSLSQCWRLSIDS*YLCTNL Trigger: CAAATTCGTACAAAGGTAGCAGGAATCTATAGAGAG...TCGCCAGCATTGTGAGAGCGAAAAGCTGTTGCTATATGATACAGTCCAGAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| 3UTR-3UTR CCA 90 bp | TGCACAAGACCACCAGGAATACCTGATTTGGTGTACCCTAAATATACACTACAGATACAGAATACCTATTaGTCATCGGACCTAAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: CTRPPGIPDLVYPKYTLQIQNTY*SSDLRG Trigger: GCCTCTTAGGTCCGATGACCAATAGGTATTCTGTAT...CTGTAGTGTATATTTAGGGTACACCAAATCAGGTATTCCTGGTGGTCTTGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| 3UTR-3UTR CCA 90 bp | CCATATACAGAATACCTATTGGTCATCGGACCTAAGAGGCAAATCAACGTAAGGATACAGAATACCTATTaGTCATCGGACCTAAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: PYTEYLLVIGPKRQINVRIQNTY*SSDLRG Trigger: GCCTCTTAGGTCCGATGACCAATAGGTATTCTGTAT...CCTTACGTTGATTTGCCTCTTAGGTCCGATGACCAATAGGTATTCTGTATATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000216807.12 ENST00000552677.5 |
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| 3UTR-3UTR CCA 90 bp | CCATATACAGAATACCTATTGGTCATCGGACCTAAGAGGCAAATCAACGTAAGGTCCTCTAGTTCACTCTaGACTGTATCATATAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: PYTEYLLVIGPKRQINVRSSSSL*TVSYSN Trigger: GTTGCTATATGATACAGTCCAGAGTGAACTAGAGGA...CCTTACGTTGATTTGCCTCTTAGGTCCGATGACCAATAGGTATTCTGTATATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| 3UTR CAA 90 bp | AGAAAAATGTTTAGAAAGAAACCCCTACCATATACAGAATACCTATaGGTCATCGGACCTAAGAGGCAAATCAACGTAAGGATCGTGATA | + |
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Preference number: 2 (lower is better) Translates to: RKMFRKKPLPYTEYL*VIGPKRQINVRIVI Trigger: TATCACGATCCTTACGTTGATTTGCCTCTTAGGTCCGATGACCAATAGGTATTCTGTATATGGTAGGGGTTTCTTTCTAAACATTTTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000216807.12 ENST00000552677.5 |
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| 3UTR-3UTR CCA 90 bp | GTTTTAAAATTTGGCAACTATGAAGTAGTGATCTGCACAGGAAGATGTTTGGAGCAAGATTGTAAGGTATaGCCATCAGTTCTAAATAAG | + |
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Preference number: 2 (lower is better) Translates to: VLKFGNYEVVICTGRCLEQDCKV*PSVLNK Trigger: CTTATTTAGAACTGATGGCCATACCTTACAATCTTG...CTCCAAACATCTTCCTGTGCAGATCACTACTTCATAGTTGCCAAATTTTAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| 3UTR TCA 72 bp | GTAGGTGAGAAGCAAGTCCCAGGCTTGGCACACATTTaGGGGGAGGGAGTTACACAGGGCAGACCACCAGGG | + |
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Preference number: 3 (lower is better) Translates to: VGEKQVPGLAHI*GEGVTQGRPPG Trigger: CCCTGGTGGTCTGCCCTGTGTAACTCCCTCCCCTCAAATGTGTGCCAAGCCTGGGACTTGCTTCTCACCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| 3UTR-3UTR CAA 90 bp | AGGCTTGGCACACATTTGAGGGGAGGGAGTTACACAGGGCAGACCACCAGGGGTTCAGCTTGCCAAGCATaGAGTCCTGTGCCACAACTC | + |
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Preference number: 3 (lower is better) Translates to: RLGTHLRGGSYTGQTTRGSACQA*SPVPQL Trigger: GAGTTGTGGCACAGGACTCAATGCTTGGCAAGCTGA...ACCCCTGGTGGTCTGCCCTGTGTAACTCCCTCCCCTCAAATGTGTGCCAAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| 3UTR CCA 72 bp | ACTGCATCCCTGGCTGATATCTTCACTGCAACTTCTTaGGATTCCCTGAGCCAGAACCATCCAGCTAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: TASLADIFTATS*DSLSQNHPAKL Trigger: CAACTTAGCTGGATGGTTCTGGCTCAGGGAATCCCAAGAAGTTGCAGTGAAGATATCAGCCAGGGATGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| 3UTR CCA 72 bp | AGCCAGAACCATCCAGCTAAGTTGCTCCCAAATTCCTaGCCACTGAGACTGCTACCTTTGTACGAATTTGCA | + |
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Preference number: 3 (lower is better) Translates to: SQNHPAKLLPNS*PLRLLPLYEFA Trigger: TGCAAATTCGTACAAAGGTAGCAGTCTCAGTGGCCAGGAATTTGGGAGCAACTTAGCTGGATGGTTCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| 3UTR-3UTR CAA 90 bp | GCATCCCTGGCTGATATCTTCACTGCAACTTCTTGGGATTCCCTGAGCCAGAACTATTTTCCTGTAAAGTaGCCAGCGGTTCCAAGTATT | + |
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Preference number: 3 (lower is better) Translates to: ASLADIFTATSWDSLSQNYFPVK*PAVPSI Trigger: AATACTTGGAACCGCTGGCAACTTTACAGGAAAATA...GTTCTGGCTCAGGGAATCCCAAGAAGTTGCAGTGAAGATATCAGCCAGGGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| 3UTR TCA 72 bp | TGGCTGATATCTTCACTGCAACTTCTTGGGATTCCCTaGGCCAGAACCATCCAGCTAAGTTGCTCCCAAATT | + |
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Preference number: 3 (lower is better) Translates to: WLISSLQLLGIP*ARTIQLSCSQI Trigger: AATTTGGGAGCAACTTAGCTGGATGGTTCTGGCTCAGGGAATCCCAAGAAGTTGCAGTGAAGATATCAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| 3UTR CCA 72 bp | TTCCAGTTTCACAGGTGGTTCCGTTTTCACTCTGTGTaGCCCCAATGTAGCCATTGCCTTCCTAATTGTTGT | + |
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Preference number: 3 (lower is better) Translates to: FQFHRWFRFHSV*PQCSHCLPNCC Trigger: ACAACAATTAGGAAGGCAATGGCTACATTGGGGCCACACAGAGTGAAAACGGAACCACCTGTGAAACTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| 3UTR GCA 72 bp | TTCCTGGCCACTGAGACTGCTACCTTTGTACGAATTTaGATATTTTCCTGTAAAGTTGCCAGCGGTTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: FLATETATFVRI*IFSCKVASGSK Trigger: CTTGGAACCGCTGGCAACTTTACAGGAAAATATGCAAATTCGTACAAAGGTAGCAGTCTCAGTGGCCAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| 3UTR TCA 72 bp | ACCATCCAGCTAAGTTGCTCCCAAATTCCTGGCCACTaGGACTGCTACCTTTGTACGAATTTGCATATTTTC | + |
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Preference number: 3 (lower is better) Translates to: TIQLSCSQIPGH*DCYLCTNLHIF Trigger: GAAAATATGCAAATTCGTACAAAGGTAGCAGTCTCAGTGGCCAGGAATTTGGGAGCAACTTAGCTGGATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| 3UTR-3UTR CAA 90 bp | TGCACAAGACCACCAGGAATACCTGATTTGGTGTACCCTAAATATACACTACAGGGCTGTGCTGCCATATaGAGGGTTTCAATTCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: CTRPPGIPDLVYPKYTLQGCAAI*RVSILC Trigger: ACAAAGAATTGAAACCCTCAATATGGCAGCACAGCC...CTGTAGTGTATATTTAGGGTACACCAAATCAGGTATTCCTGGTGGTCTTGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| 3UTR TCA 72 bp | AACAGCTTTTCGCTCTCACAATGCTGGCGAGAAGCTTaGATTTCACATTCATATTTGTTCTTTACAGATTCT | + |
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Preference number: 3 (lower is better) Translates to: NSFSLSQCWREA*ISHSYLFFTDS Trigger: AGAATCTGTAAAGAACAAATATGAATGTGAAATTCAAGCTTCTCGCCAGCATTGTGAGAGCGAAAAGCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| 3UTR TCA 72 bp | ATTTCAGCAGTTAAGTGTTTTAAAATTTGGCAACTATaGAGTAGTGATCTGCACAGGAAGATGTTTGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: ISAVKCFKIWQL*SSDLHRKMFGE Trigger: CTCTCCAAACATCTTCCTGTGCAGATCACTACTTCATAGTTGCCAAATTTTAAAACACTTAACTGCTGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR TCA 90 bp | GAAGCAAGTCCCAGGCTTGGCACACATTTGAGGGGAGGGAGTTACACAGGGCAGGGCTTGGCACACATTTaGGGGGAGGGAGTTACACAG | + |
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Preference number: 4 (lower is better) Translates to: EASPRLGTHLRGGSYTGQGLAHI*GEGVTQ Trigger: CTGTGTAACTCCCTCCCCTCAAATGTGTGCCAAGCC...CTGCCCTGTGTAACTCCCTCCCCTCAAATGTGTGCCAAGCCTGGGACTTGCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| CDS-3UTR TCA 90 bp | AAACCCCTACCATATACAGAATACCTATTGGTCATCGGACCTAAGAGGCAAATCCCACCGCCGCTTCAATaGAGGGCGCGCGGAACGCCC | + |
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Preference number: 4 (lower is better) Translates to: KPLPYTEYLLVIGPKRQIPPPLQ*RARGTP Trigger: GGGCGTTCCGCGCGCCCTTCATTGAAGCGGCGGTGG...GATTTGCCTCTTAGGTCCGATGACCAATAGGTATTCTGTATATGGTAGGGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR GCA 90 bp | CCATATACAGAATACCTATTGGTCATCGGACCTAAGAGGCAAATCAACGTAAGGCCCAGCCACCGAGCTTaGTCGCCCCCTTGGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PYTEYLLVIGPKRQINVRPSHRA*SPPWLL Trigger: GAGGAGCCAAGGGGGCGAGCAAGCTCGGTGGCTGGG...CCTTACGTTGATTTGCCTCTTAGGTCCGATGACCAATAGGTATTCTGTATATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR CCA 90 bp | TGGACTGTATCATATAGCAACAGCTTTTCGCTCTCACAATGCTGGCGAGAAGCTCCCTCGGGAATGGACTaGCATTTTCCAGCCGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: WTVSYSNSFSLSQCWREAPSGMD*HFPAAP Trigger: CGGCGCGGCTGGAAAATGCCAGTCCATTCCCGAGGG...AGCTTCTCGCCAGCATTGTGAGAGCGAAAAGCTGTTGCTATATGATACAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| 3UTR CAA 72 bp | TCTTGGGATTCCCTGAGCCAGAACCATCCAGCTAAGTaGCTCCCAAATTCCTGGCCACTGAGACTGCTACCT | + |
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Preference number: 4 (lower is better) Translates to: SWDSLSQNHPAK*LPNSWPLRLLP Trigger: AGGTAGCAGTCTCAGTGGCCAGGAATTTGGGAGCAACTTAGCTGGATGGTTCTGGCTCAGGGAATCCCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| CDS-3UTR GCA 90 bp | TGGACTGTATCATATAGCAACAGCTTTTCGCTCTCACAATGCTGGCGAGAAGCTCCTCGTCCTCGGAGCTaGTCCCCTCATTTTCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: WTVSYSNSFSLSQCWREAPRPRS*SPHFRR Trigger: ACGCCGAAAATGAGGGGAGCAGCTCCGAGGACGAGG...AGCTTCTCGCCAGCATTGTGAGAGCGAAAAGCTGTTGCTATATGATACAGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| CDS-3UTR CCA 90 bp | GCATATTTTCCTGTAAAGTTGCCAGCGGTTCCAAGTATTCTGGTGCTTTTCCAGCCCTCGGGAATGGACTaGCATTTTCCAGCCGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: AYFPVKLPAVPSILVLFQPSGMD*HFPAAP Trigger: CGGCGCGGCTGGAAAATGCCAGTCCATTCCCGAGGG...CTGGAAAAGCACCAGAATACTTGGAACCGCTGGCAACTTTACAGGAAAATATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000547420.5 ENST00000552677.5 |
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| CDS-3UTR CCA 90 bp | GAAGCAAGTCCCAGGCTTGGCACACATTTGAGGGGAGGGAGTTACACAGGGCAGTTCCAGTTTCACAGGTaGTTCCGTTTTCACTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: EASPRLGTHLRGGSYTGQFQFHR*FRFHSV Trigger: CACAGAGTGAAAACGGAACCACCTGTGAAACTGGAA...CTGCCCTGTGTAACTCCCTCCCCTCAAATGTGTGCCAAGCCTGGGACTTGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| CDS-3UTR GCA 90 bp | CCCAAATTCCTGGCCACTGAGACTGCTACCTTTGTACGAATTTGCATATTTTCCCCTCGTCCTCGGAGCTaGTCCCCTCATTTTCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: PKFLATETATFVRICIFSPRPRS*SPHFRR Trigger: ACGCCGAAAATGAGGGGAGCAGCTCCGAGGACGAGG...GGAAAATATGCAAATTCGTACAAAGGTAGCAGTCTCAGTGGCCAGGAATTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| CDS-3UTR TCA 90 bp | AGCAAGTCCCAGGCTTGGCACACATTTGAGGGGAGGGAGTTACACAGGGCAGACATATGCAGCATTGTATaGCCTTGTAGGACATTCATC | + |
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Preference number: 4 (lower is better) Translates to: SKSQAWHTFEGRELHRADICSIV*PCRTFI Trigger: GATGAATGTCCTACAAGGTCATACAATGCTGCATAT...GTCTGCCCTGTGTAACTCCCTCCCCTCAAATGTGTGCCAAGCCTGGGACTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| CDS-3UTR GCA 90 bp | GAAGCAAGTCCCAGGCTTGGCACACATTTGAGGGGAGGGAGTTACACAGGGCAGGTAATATCAATGCTGTaGCTATCCTCTTCAAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: EASPRLGTHLRGGSYTGQVISML*LSSSSL Trigger: AAGGCTTGAAGAGGATAGGCACAGCATTGATATTAC...CTGCCCTGTGTAACTCCCTCCCCTCAAATGTGTGCCAAGCCTGGGACTTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| CDS-3UTR TCA 90 bp | ATGACTGCATCCCTGGCTGATATCTTCACTGCAACTTCTTGGGATTCCCTGAGCACCTCCATCTCATCGTaGTGGTTGGTCTCCTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: MTASLADIFTATSWDSLSTSISS*WLVSFL Trigger: TAAGAAGGAGACCAACCATCACGATGAGATGGAGGT...GCTCAGGGAATCCCAAGAAGTTGCAGTGAAGATATCAGCCAGGGATGCAGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| CDS-3UTR TCA 90 bp | ACCACCAGGGGTAGAATAATTGGAGTCATCCTACAGCCATTTAGTCTGTCCACACAGCTTGCCAAGCATTaGGTCCTGTGCCACAACTCA | + |
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Preference number: 4 (lower is better) Translates to: TTRGRIIGVILQPFSLSTQLAKH*VLCHNS Trigger: TGAGTTGTGGCACAGGACTCAATGCTTGGCAAGCTG...TGTGGACAGACTAAATGGCTGTAGGATGACTCCAATTATTCTACCCCTGGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| CDS-3UTR CCA 90 bp | TTCACTGCAACTTCTTGGGATTCCCTGAGCCAGAACCATCCAGCTAAGTTGCTCTCTCATCGTGATGGTTaGTCTCCTTCTTATCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: FTATSWDSLSQNHPAKLLSHRDG*SPSYPL Trigger: GAGGGGATAAGAAGGAGACCAACCATCACGATGAGA...GAGCAACTTAGCTGGATGGTTCTGGCTCAGGGAATCCCAAGAAGTTGCAGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| CDS-3UTR CCA 90 bp | CCCAAATTCCTGGCCACTGAGACTGCTACCTTTGTACGAATTTGCATATTTTCCTTATCCCCTCGGGAATaGACTGGCATTTTCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: PKFLATETATFVRICIFSLSPRE*TGIFQP Trigger: CGGCTGGAAAATGCCAGTCCATTCCCGAGGGGATAA...GGAAAATATGCAAATTCGTACAAAGGTAGCAGTCTCAGTGGCCAGGAATTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| CDS-3UTR CCA 90 bp | AAGTTGCTCCCAAATTCCTGGCCACTGAGACTGCTACCTTTGTACGAATTTGCATTGCTCCCAAATTCCTaGCCACTGAGACTGCTACCT | + |
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Preference number: 4 (lower is better) Translates to: KLLPNSWPLRLLPLYEFALLPNS*PLRLLP Trigger: AGGTAGCAGTCTCAGTGGCCAGGAATTTGGGAGCAA...TGCAAATTCGTACAAAGGTAGCAGTCTCAGTGGCCAGGAATTTGGGAGCAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| CDS-3UTR TCA 90 bp | ACCACCAGGGGTAGAATAATTGGAGTCATCCTACAGCCATTTAGTCTGTCCACAGTCATATTCTGTAGGTaGGAAGCAAGTCCCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: TTRGRIIGVILQPFSLSTVIFCR*EASPRL Trigger: AAGCCTGGGACTTGCTTCTCACCTACAGAATATGAC...TGTGGACAGACTAAATGGCTGTAGGATGACTCCAATTATTCTACCCCTGGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| CDS-3UTR GCA 90 bp | AATCTGTTTCAAAAGACCAGACATGTACAGCAAGCACAATACTGTCAGTTATTGCCTCGTCCTCGGAGCTaGTCCCCTCATTTTCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: NLFQKTRHVQQAQYCQLLPRPRS*SPHFRR Trigger: ACGCCGAAAATGAGGGGAGCAGCTCCGAGGACGAGG...CAATAACTGACAGTATTGTGCTTGCTGTACATGTCTGGTCTTTTGAAACAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR GCA 90 bp | GCATATTTTCCTGTAAAGTTGCCAGCGGTTCCAAGTATTCTGGTGCTTTTCCAGACCATCCAGCTAAGTTaGTCCCAAATTCCTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: AYFPVKLPAVPSILVLFQTIQLS*SQIPGH Trigger: GTGGCCAGGAATTTGGGAGCAACTTAGCTGGATGGT...CTGGAAAAGCACCAGAATACTTGGAACCGCTGGCAACTTTACAGGAAAATATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| CDS-3UTR CCA 90 bp | AAAATGTTTAGAAAGAAACCCCTACCATATACAGAATACCTATTGGTCATCGGACCCTCGGGAATGGACTaGCATTTTCCAGCCGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: KMFRKKPLPYTEYLLVIGPSGMD*HFPAAP Trigger: CGGCGCGGCTGGAAAATGCCAGTCCATTCCCGAGGG...TCCGATGACCAATAGGTATTCTGTATATGGTAGGGGTTTCTTTCTAAACATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000216807.12 ENST00000552677.5 |
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| CDS-3UTR CCA 90 bp | TGGACTGTATCATATAGCAACAGCTTTTCGCTCTCACAATGCTGGCGAGAAGCTCGGTTCCAAGTATTCTaGTGCTTTTCCAGCTATGAC | + |
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Preference number: 4 (lower is better) Translates to: WTVSYSNSFSLSQCWREARFQVF*CFSSYD Trigger: GTCATAGCTGGAAAAGCACCAGAATACTTGGAACCG...AGCTTCTCGCCAGCATTGTGAGAGCGAAAAGCTGTTGCTATATGATACAGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| CDS-3UTR TCA 90 bp | TGCACAAGACCACCAGGAATACCTGATTTGGTGTACCCTAAATATACACTACAGACCTCCATCTCATCGTaGTGGTTGGTCTCCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CTRPPGIPDLVYPKYTLQTSISS*WLVSFL Trigger: TAAGAAGGAGACCAACCATCACGATGAGATGGAGGT...CTGTAGTGTATATTTAGGGTACACCAAATCAGGTATTCCTGGTGGTCTTGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR CCA 90 bp | GCATATTTTCCTGTAAAGTTGCCAGCGGTTCCAAGTATTCTGGTGCTTTTCCAGCGGTTCCAAGTATTCTaGTGCTTTTCCAGCTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: AYFPVKLPAVPSILVLFQRFQVF*CFSSYD Trigger: GTCATAGCTGGAAAAGCACCAGAATACTTGGAACCG...CTGGAAAAGCACCAGAATACTTGGAACCGCTGGCAACTTTACAGGAAAATATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000547420.5 ENST00000552677.5 |
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| CDS-3UTR CCA 90 bp | TCTGGACTGTATCATATAGCAACAGCTTTTCGCTCTCACAATGCTGGCGAGAAGATACAGAATACCTATTaGTCATCGGACCTAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGLYHIATAFRSHNAGEKIQNTY*SSDLRG Trigger: GCCTCTTAGGTCCGATGACCAATAGGTATTCTGTAT...CTTCTCGCCAGCATTGTGAGAGCGAAAAGCTGTTGCTATATGATACAGTCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| CDS-3UTR TCA 90 bp | TTGTACGAATTTGCATATTTTCCTGTAAAGTTGCCAGCGGTTCCAAGTATTCTGCAAATTCCTGGCCACTaGGACTGCTACCTTTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: LYEFAYFPVKLPAVPSILQIPGH*DCYLCT Trigger: CGTACAAAGGTAGCAGTCTCAGTGGCCAGGAATTTG...CAGAATACTTGGAACCGCTGGCAACTTTACAGGAAAATATGCAAATTCGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| CDS-3UTR GCA 90 bp | TGGACTGTATCATATAGCAACAGCTTTTCGCTCTCACAATGCTGGCGAGAAGCTGTAATATCAATGCTGTaGCTATCCTCTTCAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WTVSYSNSFSLSQCWREAVISML*LSSSSL Trigger: AAGGCTTGAAGAGGATAGGCACAGCATTGATATTAC...AGCTTCTCGCCAGCATTGTGAGAGCGAAAAGCTGTTGCTATATGATACAGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| CDS-3UTR GCA 90 bp | GTTGCCAGCGGTTCCAAGTATTCTGGTGCTTTTCCAGCTATGACTTCTTGTAGTTCAGATCTAGCACTGTaGAGATGTTTTTCCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VASGSKYSGAFPAMTSCSSDLAL*RCFSSF Trigger: GAAACTGGAAAAACATCTGCACAGTGCTAGATCTGA...ACTACAAGAAGTCATAGCTGGAAAAGCACCAGAATACTTGGAACCGCTGGCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552677.5 |
||
| CDS-3UTR CCA 90 bp | ACCACCAGGGGTAGAATAATTGGAGTCATCCTACAGCCATTTAGTCTGTCCACATCCTCTAGTTCACTCTaGACTGTATCATATAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TTRGRIIGVILQPFSLSTSSSSL*TVSYSN Trigger: GTTGCTATATGATACAGTCCAGAGTGAACTAGAGGA...TGTGGACAGACTAAATGGCTGTAGGATGACTCCAATTATTCTACCCCTGGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551774.1 |
||
| CDS-3UTR CCA 90 bp | TTTCAAAAGACCAGACATGTACAGCAAGCACAATACTGTCAGTTATTGTTCACCCGTTTTCACTCTGTGTaGCCCCAATGTAGCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: FQKTRHVQQAQYCQLLFTRFHSV*PQCSHC Trigger: GCAATGGCTACATTGGGGCCACACAGAGTGAAAACG...GGTGAACAATAACTGACAGTATTGTGCTTGCTGTACATGTCTGGTCTTTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR CCA 90 bp | TGCACAAGACCACCAGGAATACCTGATTTGGTGTACCCTAAATATACACTACAGTTCCAGTTTCACAGGTaGTTCCGTTTTCACTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CTRPPGIPDLVYPKYTLQFQFHR*FRFHSV Trigger: CACAGAGTGAAAACGGAACCACCTGTGAAACTGGAA...CTGTAGTGTATATTTAGGGTACACCAAATCAGGTATTCCTGGTGGTCTTGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216807.12 |
||
| 3UTR CAA 72 bp | ATGTGGCTAGCGGAAGGGAGGCCAACACTTTCTAAATaGCACCAAATGGCCTTAAAGTGTAGAAATACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MWLAEGRPTLSK*HQMALKCRNTK Trigger: TTTGGTATTTCTACACTTTAAGGCCATTTGGTGCAATTTAGAAAGTGTTGGCCTCCCTTCCGCTAGCCACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| 3UTR CAA 72 bp | TTGCTCCCAAATTCCTGGCCACTGAGACTGCTACCTTaGTACGAATTTGCATATTTTCCTGTAAAGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPNSWPLRLLP*YEFAYFPVKLP Trigger: TGGCAACTTTACAGGAAAATATGCAAATTCGTACAAAGGTAGCAGTCTCAGTGGCCAGGAATTTGGGAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| CDS-3UTR CCA 90 bp | AAAATGTTTAGAAAGAAACCCCTACCATATACAGAATACCTATTGGTCATCGGATTATCCCCTCGGGAATaGACTGGCATTTTCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KMFRKKPLPYTEYLLVIGLSPRE*TGIFQP Trigger: CGGCTGGAAAATGCCAGTCCATTCCCGAGGGGATAA...TCCGATGACCAATAGGTATTCTGTATATGGTAGGGGTTTCTTTCTAAACATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000216807.12 ENST00000552677.5 |
||
| CDS-3UTR CCA 90 bp | TTTCAAAAGACCAGACATGTACAGCAAGCACAATACTGTCAGTTATTGTTCACCTCTCATCGTGATGGTTaGTCTCCTTCTTATCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQKTRHVQQAQYCQLLFTSHRDG*SPSYPL Trigger: GAGGGGATAAGAAGGAGACCAACCATCACGATGAGA...GGTGAACAATAACTGACAGTATTGTGCTTGCTGTACATGTCTGGTCTTTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR CCA 90 bp | GGCCCACCCAGGATAATCTTTCAATTAACTCAAAAACTGATTTGGAACCTTAATCGTTTTCACTCTGTGTaGCCCCAATGTAGCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPPRIIFQLTQKLIWNLNRFHSV*PQCSHC Trigger: GCAATGGCTACATTGGGGCCACACAGAGTGAAAACG...ATTAAGGTTCCAAATCAGTTTTTGAGTTAATTGAAAGATTATCCTGGGTGGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000551774.1 |
||
| CDS-3UTR CCA 90 bp | TTTGTCCACGTATATACCATTCACCATCATAATATAGTCTTCCCTCTTCAGATCTCTCATCGTGATGGTTaGTCTCCTTCTTATCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FVHVYTIHHHNIVFPLQISHRDG*SPSYPL Trigger: GAGGGGATAAGAAGGAGACCAACCATCACGATGAGA...GATCTGAAGAGGGAAGACTATATTATGATGGTGAATGGTATATACGTGGACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| CDS-3UTR CCA 90 bp | CGAATTTGCATATTTTCCTGTAAAGTTGCCAGCGGTTCCAAGTATTCTGGTGCTTCCTCTAGTTCACTCTaGACTGTATCATATAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RICIFSCKVASGSKYSGASSSSL*TVSYSN Trigger: GTTGCTATATGATACAGTCCAGAGTGAACTAGAGGA...AGCACCAGAATACTTGGAACCGCTGGCAACTTTACAGGAAAATATGCAAATTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| CDS-3UTR CCA 90 bp | AAAATGTTTAGAAAGAAACCCCTACCATATACAGAATACCTATTGGTCATCGGACGTTTTCACTCTGTGTaGCCCCAATGTAGCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: KMFRKKPLPYTEYLLVIGRFHSV*PQCSHC Trigger: GCAATGGCTACATTGGGGCCACACAGAGTGAAAACG...TCCGATGACCAATAGGTATTCTGTATATGGTAGGGGTTTCTTTCTAAACATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000216807.12 ENST00000552677.5 |
||
| CDS-3UTR CCA 90 bp | TTGTACGAATTTGCATATTTTCCTGTAAAGTTGCCAGCGGTTCCAAGTATTCTGTTCCAGTTTCACAGGTaGTTCCGTTTTCACTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LYEFAYFPVKLPAVPSILFQFHR*FRFHSV Trigger: CACAGAGTGAAAACGGAACCACCTGTGAAACTGGAA...CAGAATACTTGGAACCGCTGGCAACTTTACAGGAAAATATGCAAATTCGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| CDS-3UTR TCA 90 bp | AAAATGTTTAGAAAGAAACCCCTACCATATACAGAATACCTATTGGTCATCGGAACCTCCATCTCATCGTaGTGGTTGGTCTCCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KMFRKKPLPYTEYLLVIGTSISS*WLVSFL Trigger: TAAGAAGGAGACCAACCATCACGATGAGATGGAGGT...TCCGATGACCAATAGGTATTCTGTATATGGTAGGGGTTTCTTTCTAAACATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216807.12 ENST00000552677.5 |
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| CDS-3UTR GCA 90 bp | TGCACAAGACCACCAGGAATACCTGATTTGGTGTACCCTAAATATACACTACAGCTCTCTATAGATTCCTaGTACCTTTGTACGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: CTRPPGIPDLVYPKYTLQLSIDS*YLCTNL Trigger: CAAATTCGTACAAAGGTAGCAGGAATCTATAGAGAG...CTGTAGTGTATATTTAGGGTACACCAAATCAGGTATTCCTGGTGGTCTTGTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR GCA 90 bp | TTACTAAAATCTGTTTCAAAAGACCAGACATGTACAGCAAGCACAATACTGTCATACAGCCGGCTGTGCTaGCATATTGAGGGTTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSVSKDQTCTASTILSYSRLC*HIEGFN Trigger: ATTGAAACCCTCAATATGGCAGCACAGCCGGCTGTA...TGACAGTATTGTGCTTGCTGTACATGTCTGGTCTTTTGAAACAGATTTTAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR CCA 90 bp | ATGTACAGCAAGCACAATACTGTCAGTTATTGTTCACCACTTATATACTGCATCCGGTTCCAAGTATTCTaGTGCTTTTCCAGCTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: MYSKHNTVSYCSPLIYCIRFQVF*CFSSYD Trigger: GTCATAGCTGGAAAAGCACCAGAATACTTGGAACCG...GATGCAGTATATAAGTGGTGAACAATAACTGACAGTATTGTGCTTGCTGTACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR CCA 90 bp | GGCCCACCCAGGATAATCTTTCAATTAACTCAAAAACTGATTTGGAACCTTAATCGGTTCCAAGTATTCTaGTGCTTTTCCAGCTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPPRIIFQLTQKLIWNLNRFQVF*CFSSYD Trigger: GTCATAGCTGGAAAAGCACCAGAATACTTGGAACCG...ATTAAGGTTCCAAATCAGTTTTTGAGTTAATTGAAAGATTATCCTGGGTGGGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| CDS-3UTR CCA 90 bp | CCATATACAGAATACCTATTGGTCATCGGACCTAAGAGGCAAATCAACGTAAGGCAGGAATACCTGATTTaGTGTACCCTAAATATACAC | + |
|
Preference number: 4 (lower is better) Translates to: PYTEYLLVIGPKRQINVRQEYLI*CTLNIH Trigger: GTGTATATTTAGGGTACACCAAATCAGGTATTCCTG...CCTTACGTTGATTTGCCTCTTAGGTCCGATGACCAATAGGTATTCTGTATATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| 3UTR CAA 72 bp | TTTAGAAAGAAACCCCTACCATATACAGAATACCTATaGGTCATCGGACCTAAGAGGCAAATCAACGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRKKPLPYTEYL*VIGPKRQINVR Trigger: CCTTACGTTGATTTGCCTCTTAGGTCCGATGACCAATAGGTATTCTGTATATGGTAGGGGTTTCTTTCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216807.12 ENST00000552677.5 |
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| 3UTR CAA 72 bp | CAACAGCTTTTCGCTCTCACAATGCTGGCGAGAAGCTaGAATTTCACATTCATATTTGTTCTTTACAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: QQLFALTMLARS*NFTFIFVLYRF Trigger: GAATCTGTAAAGAACAAATATGAATGTGAAATTCAAGCTTCTCGCCAGCATTGTGAGAGCGAAAAGCTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| CDS-3UTR TCA 90 bp | ATGTACAGCAAGCACAATACTGTCAGTTATTGTTCACCACTTATATACTGCATCTGCTGGCGAGAAGCTTaGATTTCACATTCATATTTG | + |
|
Preference number: 4 (lower is better) Translates to: MYSKHNTVSYCSPLIYCICWREA*ISHSYL Trigger: CAAATATGAATGTGAAATTCAAGCTTCTCGCCAGCA...GATGCAGTATATAAGTGGTGAACAATAACTGACAGTATTGTGCTTGCTGTACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR TCA 90 bp | GTTTTAAAATTTGGCAACTATGAAGTAGTGATCTGCACAGGAAGATGTTTGGAGAAAATTTGGCAACTATaGAGTAGTGATCTGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLKFGNYEVVICTGRCLEKIWQL*SSDLHR Trigger: CCTGTGCAGATCACTACTTCATAGTTGCCAAATTTT...CTCCAAACATCTTCCTGTGCAGATCACTACTTCATAGTTGCCAAATTTTAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR GCA 90 bp | AATCTGTTTCAAAAGACCAGACATGTACAGCAAGCACAATACTGTCAGTTATTGTCAGATCTAGCACTGTaGAGATGTTTTTCCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NLFQKTRHVQQAQYCQLLSDLAL*RCFSSF Trigger: GAAACTGGAAAAACATCTGCACAGTGCTAGATCTGA...CAATAACTGACAGTATTGTGCTTGCTGTACATGTCTGGTCTTTTGAAACAGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR GCA 90 bp | GGCCCACCCAGGATAATCTTTCAATTAACTCAAAAACTGATTTGGAACCTTAATTCAGATCTAGCACTGTaGAGATGTTTTTCCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPPRIIFQLTQKLIWNLNSDLAL*RCFSSF Trigger: GAAACTGGAAAAACATCTGCACAGTGCTAGATCTGA...ATTAAGGTTCCAAATCAGTTTTTGAGTTAATTGAAAGATTATCCTGGGTGGGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| CDS-3UTR CCA 90 bp | AAAATGTTTAGAAAGAAACCCCTACCATATACAGAATACCTATTGGTCATCGGAATACAGAATACCTATTaGTCATCGGACCTAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KMFRKKPLPYTEYLLVIGIQNTY*SSDLRG Trigger: GCCTCTTAGGTCCGATGACCAATAGGTATTCTGTAT...TCCGATGACCAATAGGTATTCTGTATATGGTAGGGGTTTCTTTCTAAACATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216807.12 ENST00000552677.5 |
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| CDS-3UTR GCA 90 bp | AAAATGTTTAGAAAGAAACCCCTACCATATACAGAATACCTATTGGTCATCGGAGTAATATCAATGCTGTaGCTATCCTCTTCAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KMFRKKPLPYTEYLLVIGVISML*LSSSSL Trigger: AAGGCTTGAAGAGGATAGGCACAGCATTGATATTAC...TCCGATGACCAATAGGTATTCTGTATATGGTAGGGGTTTCTTTCTAAACATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216807.12 ENST00000552677.5 |
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| CDS-3UTR CCA 90 bp | TTACTAAAATCTGTTTCAAAAGACCAGACATGTACAGCAAGCACAATACTGTCACAAGATTGTAAGGTATaGCCATCAGTTCTAAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLKSVSKDQTCTASTILSQDCKV*PSVLNK Trigger: CTTATTTAGAACTGATGGCCATACCTTACAATCTTG...TGACAGTATTGTGCTTGCTGTACATGTCTGGTCTTTTGAAACAGATTTTAGTAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS TCA 90 bp | GTCGCTTTCCACTACCGGCGCCCAGCCCGGCCACCGCCGCTTCAATaGAGGGCGCGCGGAACGCCCCAACCCACCCAGCCACCGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VAFHYRRPARPPPLQ*RARGTPQPTQPPSL Trigger: CAAGCTCGGTGGCTGGGTGGGTTGGGGCGTTCCGCGCGCCCTTCATTGAAGCGGCGGTGGCCGGGCTGGGCGCCGGTAGTGGAAAGCGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS CCA 90 bp | CTCATCGTGATGGTTGGTCTCCTTCTTATCCCCTCGGGAATGGACTaGCATTTTCCAGCCGCGCCGTCGCTTTCCACTACCGGCGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LIVMVGLLLIPSGMD*HFPAAPSLSTTGAQ Trigger: CTGGGCGCCGGTAGTGGAAAGCGACGGCGCGGCTGGAAAATGCCAGTCCATTCCCGAGGGGATAAGAAGGAGACCAACCATCACGATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000216807.12 ENST00000547420.5 ENST00000548758.1 ENST00000552677.5 |
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| CDS GCA 90 bp | CATCCTCGGAGACCGACGAGCTCTCAGTGTCCTCGTCCTCGGAGCTaGTCCCCTCATTTTCGGCGTAGTCCACCTCCATCTCATCGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HPRRPTSSQCPRPRS*SPHFRRSPPPSHRD Trigger: ATCACGATGAGATGGAGGTGGACTACGCCGAAAATGAGGGGAGCAGCTCCGAGGACGAGGACACTGAGAGCTCGTCGGTCTCCGAGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000216807.12 ENST00000547420.5 ENST00000548758.1 ENST00000552677.5 |
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| CDS-3UTR CAA 90 bp | AGTCCCAGGCTTGGCACACATTTGAGGGGAGGGAGTTACACAGGGCAGACCACCTCAGCTTGCCAAGCATaGAGTCCTGTGCCACAACTC | + |
|
Preference number: 5 (lower is better) Translates to: SPRLGTHLRGGSYTGQTTSACQA*SPVPQL Trigger: GAGTTGTGGCACAGGACTCAATGCTTGGCAAGCTGA...GGTGGTCTGCCCTGTGTAACTCCCTCCCCTCAAATGTGTGCCAAGCCTGGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| CDS-3UTR CAA 90 bp | CCATATACAGAATACCTATTGGTCATCGGACCTAAGAGGCAAATCAACGTAAGGACCCAGCCACCGAGCTaGCTCGCCCCCTTGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PYTEYLLVIGPKRQINVRTQPPS*LAPLAP Trigger: AGGAGCCAAGGGGGCGAGCAAGCTCGGTGGCTGGGT...CCTTACGTTGATTTGCCTCTTAGGTCCGATGACCAATAGGTATTCTGTATATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216807.12 |
||
| CDS-3UTR CAA 90 bp | GAAGCAAGTCCCAGGCTTGGCACACATTTGAGGGGAGGGAGTTACACAGGGCAGTATTTTCCTGTAAAGTaGCCAGCGGTTCCAAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: EASPRLGTHLRGGSYTGQYFPVK*PAVPSI Trigger: AATACTTGGAACCGCTGGCAACTTTACAGGAAAATA...CTGCCCTGTGTAACTCCCTCCCCTCAAATGTGTGCCAAGCCTGGGACTTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| CDS-3UTR CAA 90 bp | GATTCCCTGAGCCAGAACCATCCAGCTAAGTTGCTCCCAAATTCCTGGCCACTGTATTTTCCTGTAAAGTaGCCAGCGGTTCCAAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: DSLSQNHPAKLLPNSWPLYFPVK*PAVPSI Trigger: AATACTTGGAACCGCTGGCAACTTTACAGGAAAATA...CAGTGGCCAGGAATTTGGGAGCAACTTAGCTGGATGGTTCTGGCTCAGGGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547420.5 |
||
| CDS-3UTR CAA 90 bp | ACCACCAGGGGTAGAATAATTGGAGTCATCCTACAGCCATTTAGTCTGTCCACAACAACTGGCTTCTTTTaGTCAGGACTGAAAGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: TTRGRIIGVILQPFSLSTTTGFF*SGLKGS Trigger: GGATCCTTTCAGTCCTGACAAAAAGAAGCCAGTTGT...TGTGGACAGACTAAATGGCTGTAGGATGACTCCAATTATTCTACCCCTGGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551774.1 |
||
| CDS-3UTR CAA 90 bp | CCATATACAGAATACCTATTGGTCATCGGACCTAAGAGGCAAATCAACGTAAGGACAACTGGCTTCTTTTaGTCAGGACTGAAAGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: PYTEYLLVIGPKRQINVRTTGFF*SGLKGS Trigger: GGATCCTTTCAGTCCTGACAAAAAGAAGCCAGTTGT...CCTTACGTTGATTTGCCTCTTAGGTCCGATGACCAATAGGTATTCTGTATATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216807.12 ENST00000552677.5 |
||
| CDS-3UTR CAA 90 bp | AAACCCCTACCATATACAGAATACCTATTGGTCATCGGACCTAAGAGGCAAATCGGCTGTGCTGCCATATaGAGGGTTTCAATTCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KPLPYTEYLLVIGPKRQIGCAAI*RVSILC Trigger: ACAAAGAATTGAAACCCTCAATATGGCAGCACAGCC...GATTTGCCTCTTAGGTCCGATGACCAATAGGTATTCTGTATATGGTAGGGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216807.12 |
||
| CDS TCA 90 bp | GATTCAACAAGTCTCCAAAGAGAATATTTCCCAACTCAGACTAAATaGCTTACGTTCCGTTTTCACTCTGTGTGGCCCCAATGTAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DSTSLQREYFPTQTK*LTFRFHSVWPQCSH Trigger: ATGGCTACATTGGGGCCACACAGAGTGAAAACGGAACGTAAGTCATTTAGTCTGAGTTGGGAAATATTCTCTTTGGAGACTTGTTGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548758.1 |
||
| CDS-3UTR CAA 90 bp | TGGACTGTATCATATAGCAACAGCTTTTCGCTCTCACAATGCTGGCGAGAAGCTATGCTGGCGAGAAGCTaGAATTTCACATTCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: WTVSYSNSFSLSQCWREAMLARS*NFTFIF Trigger: AAATATGAATGTGAAATTCAAGCTTCTCGCCAGCAT...AGCTTCTCGCCAGCATTGTGAGAGCGAAAAGCTGTTGCTATATGATACAGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552677.5 |
||
| CDS-3UTR CAA 90 bp | TATACAGAATACCTATTGGTCATCGGACCTAAGAGGCAAATCAACGTAAGGATCACAACTGGCTTCTTTTaGTCAGGACTGAAAGGATCC | + |
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Preference number: 5 (lower is better) Translates to: YTEYLLVIGPKRQINVRITTGFF*SGLKGS Trigger: GGATCCTTTCAGTCCTGACAAAAAGAAGCCAGTTGT...GATCCTTACGTTGATTTGCCTCTTAGGTCCGATGACCAATAGGTATTCTGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216807.12 ENST00000552677.5 |
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| CDS-3UTR CAA 90 bp | CGAATTTGCATATTTTCCTGTAAAGTTGCCAGCGGTTCCAAGTATTCTGGTGCTTATACAGAATACCTATaGGTCATCGGACCTAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: RICIFSCKVASGSKYSGAYTEYL*VIGPKR Trigger: CCTCTTAGGTCCGATGACCAATAGGTATTCTGTATA...AGCACCAGAATACTTGGAACCGCTGGCAACTTTACAGGAAAATATGCAAATTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552677.5 |
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| CDS-3UTR CAA 90 bp | CGAATTTGCATATTTTCCTGTAAAGTTGCCAGCGGTTCCAAGTATTCTGGTGCTTATTTTCCTGTAAAGTaGCCAGCGGTTCCAAGTATT | + |
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Preference number: 5 (lower is better) Translates to: RICIFSCKVASGSKYSGAYFPVK*PAVPSI Trigger: AATACTTGGAACCGCTGGCAACTTTACAGGAAAATA...AGCACCAGAATACTTGGAACCGCTGGCAACTTTACAGGAAAATATGCAAATTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000547420.5 ENST00000552677.5 |
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| CDS-3UTR CAA 90 bp | TGCACAAGACCACCAGGAATACCTGATTTGGTGTACCCTAAATATACACTACAGCCAGGAATACCTGATTaGGTGTACCCTAAATATACA | + |
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Preference number: 5 (lower is better) Translates to: CTRPPGIPDLVYPKYTLQPGIPD*VYPKYT Trigger: TGTATATTTAGGGTACACCAAATCAGGTATTCCTGG...CTGTAGTGTATATTTAGGGTACACCAAATCAGGTATTCCTGGTGGTCTTGTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR CAA 90 bp | CCATATACAGAATACCTATTGGTCATCGGACCTAAGAGGCAAATCAACGTAAGGCAACGTAATATCACTTaGCTGACACTGAATTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: PYTEYLLVIGPKRQINVRQRNIT*LTLNFS Trigger: GCTGAAATTCAGTGTCAGCAAAGTGATATTACGTTG...CCTTACGTTGATTTGCCTCTTAGGTCCGATGACCAATAGGTATTCTGTATATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR CAA 90 bp | TGTAAAGTTGCCAGCGGTTCCAAGTATTCTGGTGCTTTTCCAGCTATGACTTCTCTGAGACTGCTACCTTaGTACGAATTTGCATATTTT | + |
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Preference number: 5 (lower is better) Translates to: CKVASGSKYSGAFPAMTSLRLLP*YEFAYF Trigger: AAAATATGCAAATTCGTACAAAGGTAGCAGTCTCAG...AGAAGTCATAGCTGGAAAAGCACCAGAATACTTGGAACCGCTGGCAACTTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547420.5 |
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| CDS-3UTR CAA 90 bp | ACAAAATATATGAATATCAGCTTGCCAAGCATTGAGTCCTGTGCCACAACTCACTATATGAATATCAGCTaGCCAAGCATTGAGTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: TKYMNISLPSIESCATTHYMNIS*PSIESC Trigger: ACAGGACTCAATGCTTGGCAAGCTGATATTCATATA...GTGAGTTGTGGCACAGGACTCAATGCTTGGCAAGCTGATATTCATATATTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| CDS-3UTR CAA 90 bp | AATCTGTTTCAAAAGACCAGACATGTACAGCAAGCACAATACTGTCAGTTATTGTATACAGAATACCTATaGGTCATCGGACCTAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: NLFQKTRHVQQAQYCQLLYTEYL*VIGPKR Trigger: CCTCTTAGGTCCGATGACCAATAGGTATTCTGTATA...CAATAACTGACAGTATTGTGCTTGCTGTACATGTCTGGTCTTTTGAAACAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR CAA 90 bp | ACAAAATATATGAATATCAGCTTGCCAAGCATTGAGTCCTGTGCCACAACTCACAAAATCTCCTCATCTTaGTCATATTCTGTAGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: TKYMNISLPSIESCATTHKISSS*SYSVGE Trigger: CTCACCTACAGAATATGACAAAGATGAGGAGATTTT...GTGAGTTGTGGCACAGGACTCAATGCTTGGCAAGCTGATATTCATATATTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| CDS-3UTR CAA 90 bp | ATGTACAGCAAGCACAATACTGTCAGTTATTGTTCACCACTTATATACTGCATCTATTTTCCTGTAAAGTaGCCAGCGGTTCCAAGTATT | + |
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Preference number: 5 (lower is better) Translates to: MYSKHNTVSYCSPLIYCIYFPVK*PAVPSI Trigger: AATACTTGGAACCGCTGGCAACTTTACAGGAAAATA...GATGCAGTATATAAGTGGTGAACAATAACTGACAGTATTGTGCTTGCTGTACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR CAA 90 bp | ATGTACAGCAAGCACAATACTGTCAGTTATTGTTCACCACTTATATACTGCATCCCAACACTTTCTAAATaGCACCAAATGGCCTTAAAG | + |
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Preference number: 5 (lower is better) Translates to: MYSKHNTVSYCSPLIYCIPTLSK*HQMALK Trigger: CTTTAAGGCCATTTGGTGCAATTTAGAAAGTGTTGG...GATGCAGTATATAAGTGGTGAACAATAACTGACAGTATTGTGCTTGCTGTACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR CAA 90 bp | AATCTGTTTCAAAAGACCAGACATGTACAGCAAGCACAATACTGTCAGTTATTGTTTTGGAAGTTAATTTaGAATGTGGCTAGCGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: NLFQKTRHVQQAQYCQLLFWKLI*NVASGR Trigger: CCTTCCGCTAGCCACATTCAAAATTAACTTCCAAAA...CAATAACTGACAGTATTGTGCTTGCTGTACATGTCTGGTCTTTTGAAACAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS-3UTR CAA 90 bp | GGCCCACCCAGGATAATCTTTCAATTAACTCAAAAACTGATTTGGAACCTTAATTACACATATGCAGCATaGTATGACCTTGTAGGACAT | + |
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Preference number: 5 (lower is better) Translates to: GPPRIIFQLTQKLIWNLNYTYAA*YDLVGH Trigger: ATGTCCTACAAGGTCATACAATGCTGCATATGTGTA...ATTAAGGTTCCAAATCAGTTTTTGAGTTAATTGAAAGATTATCCTGGGTGGGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| CDS-3UTR CAA 90 bp | GGCCCACCCAGGATAATCTTTCAATTAACTCAAAAACTGATTTGGAACCTTAATATGCTGGCGAGAAGCTaGAATTTCACATTCATATTT | + |
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Preference number: 5 (lower is better) Translates to: GPPRIIFQLTQKLIWNLNMLARS*NFTFIF Trigger: AAATATGAATGTGAAATTCAAGCTTCTCGCCAGCAT...ATTAAGGTTCCAAATCAGTTTTTGAGTTAATTGAAAGATTATCCTGGGTGGGCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551774.1 |
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| CDS-3UTR CAA 90 bp | TTACTAAAATCTGTTTCAAAAGACCAGACATGTACAGCAAGCACAATACTGTCAATGCTGGCGAGAAGCTaGAATTTCACATTCATATTT | + |
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Preference number: 5 (lower is better) Translates to: LLKSVSKDQTCTASTILSMLARS*NFTFIF Trigger: AAATATGAATGTGAAATTCAAGCTTCTCGCCAGCAT...TGACAGTATTGTGCTTGCTGTACATGTCTGGTCTTTTGAAACAGATTTTAGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216807.12 |
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| CDS GCA 72 bp | AGACCGACGAGCTCTCAGTGTCCTCGTCCTCGGAGCTaGTCCCCTCATTTTCGGCGTAGTCCACCTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: RPTSSQCPRPRS*SPHFRRSPPPS Trigger: AGATGGAGGTGGACTACGCCGAAAATGAGGGGAGCAGCTCCGAGGACGAGGACACTGAGAGCTCGTCGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000216807.12 ENST00000547420.5 ENST00000548758.1 ENST00000552677.5 |
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| CDS CCA 72 bp | ATGGTTGGTCTCCTTCTTATCCCCTCGGGAATGGACTaGCATTTTCCAGCCGCGCCGTCGCTTTCCACTACC | + |
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Preference number: 6 (lower is better) Translates to: MVGLLLIPSGMD*HFPAAPSLSTT Trigger: GGTAGTGGAAAGCGACGGCGCGGCTGGAAAATGCCAGTCCATTCCCGAGGGGATAAGAAGGAGACCAACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000216807.12 ENST00000547420.5 ENST00000548758.1 ENST00000552677.5 |
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| CDS CCA 72 bp | TTTCGGCGTAGTCCACCTCCATCTCATCGTGATGGTTaGTCTCCTTCTTATCCCCTCGGGAATGGACTGGCA | + |
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Preference number: 6 (lower is better) Translates to: FRRSPPPSHRDG*SPSYPLGNGLA Trigger: TGCCAGTCCATTCCCGAGGGGATAAGAAGGAGACCAACCATCACGATGAGATGGAGGTGGACTACGCCGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000216807.12 ENST00000547420.5 ENST00000548758.1 ENST00000552677.5 |
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| CDS TCA 72 bp | AGTCTCCAAAGAGAATATTTCCCAACTCAGACTAAATaGCTTACGTTCCGTTTTCACTCTGTGTGGCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: SLQREYFPTQTK*LTFRFHSVWPQ Trigger: TTGGGGCCACACAGAGTGAAAACGGAACGTAAGTCATTTAGTCTGAGTTGGGAAATATTCTCTTTGGAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548758.1 |
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