RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRME1 (Homo sapiens)

Ensembl gene IDs: ENSG00000132016

Ensembl transcript IDs: ENST00000346736.6, ENST00000585755.1, ENST00000586500.1, ENST00000586783.5, ENST00000588115.5, ENST00000589393.1, ENST00000591439.5, ENST00000591586.5, ENST00000671728.1, ENST00000672170.1, ENST00000672346.1, ENST00000672786.1, ENST00000672796.1, ENST00000673129.1, ENST00000673175.1, ENST00000673392.1

Found 808 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTaGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCT +
Preference number: 1 (lower is better)
Translates to: TLKFANPDRMGPAQR*PASWSPGPLEVTGA
Trigger: AGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR CCA 90 bp TGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATaGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAGGGTCC +
Preference number: 1 (lower is better)
Translates to: WPGEARTSRPPLCCP*KTNFRATEGRFVGS
Trigger: GGACCCTACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp AGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTTCGCGGAGACCCCGGGCATaGTGCGGGGGAGAGGGTGCC +
Preference number: 2 (lower is better)
Translates to: RQVQVPGNREGSHPALASRRPRA*CGGEGA
Trigger: GGCACCCTCTCCCCCGCACCATGCCCGGGGTCTCCG...CGAAGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
3UTR-3UTR CCA 90 bp CCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGGAGACCCCGGGCATaGTGCGGGGGAGAGGGTGCC +
Preference number: 2 (lower is better)
Translates to: PLQRGRFKCQVTERAATQRRPRA*CGGEGA
Trigger: GGCACCCTCTCCCCCGCACCATGCCCGGGGTCTCCG...CTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
3UTR-3UTR CCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACGGAGGTCTGCGGACATaGGGGCTGGGTGGCAAAGGA +
Preference number: 2 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDGGLRT*GLGGKG
Trigger: TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCC...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR GCA 90 bp TCCAGGACGGTGGGGAGGGGAGCTGCATTGGCCCTGGGACGCTGTCGGAGATTCGCCGCTCTGATGAACTaGCTCTGGTCCACGTGCAGG +
Preference number: 2 (lower is better)
Translates to: SRTVGRGAALALGRCRRFAALMN*LWSTCR
Trigger: CCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGC...GAATCTCCGACAGCGTCCCAGGGCCAATGCAGCTCCCCTCCCCACCGTCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
3UTR-3UTR GCA 90 bp ACATCCAGGACGGTGGGGAGGGGAGCTGCATTGGCCCTGGGACGCTGTCGGAGAGCCGCTCTGATGAACTaGCTCTGGTCCACGTGCAGG +
Preference number: 2 (lower is better)
Translates to: TSRTVGRGAALALGRCRRAALMN*LWSTCR
Trigger: CCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGC...TCTCCGACAGCGTCCCAGGGCCAATGCAGCTCCCCTCCCCACCGTCCTGGATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
3UTR-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAGGAGGTCTGCGGACATaGGGGCTGGGTGGCAAAGGA +
Preference number: 2 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTGGLRT*GLGGKG
Trigger: TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCC...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACTGCGGACATGGGGGCTaGGTGGCAAAGGAAACACAG +
Preference number: 2 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDCGHGG*VAKETQ
Trigger: CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCA...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGGGAGGTCTGCGGACATaGGGGCTGGGTGGCAAAGGA +
Preference number: 2 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKGGLRT*GLGGKG
Trigger: TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCC...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACTCCACTAGGACCCCCTaGAGCATCTTGGAGGAGGTC +
Preference number: 2 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDSTRTP*SILEEV
Trigger: GACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGA...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR TCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAACTTCCGGGCAACTaGAGGGAGGTTTGTAGGGTC +
Preference number: 2 (lower is better)
Translates to: GQLPGAQARLKSLGLWETQLPGN*REVCRV
Trigger: GACCCTACAAACCTCCCTTCAGTTGCCCGGAAGTTG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACGACATGGGGGCTGGGTaGCAAAGGAAACACAGACCT +
Preference number: 2 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDDMGAG*QRKHRP
Trigger: AGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTC...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACATCCACTAGGACCCCCTaGAGCATCTTGGAGGAGGTC +
Preference number: 2 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTSTRTP*SILEEV
Trigger: GACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGA...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR TCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACAACTTCCGGGCAACTaGAGGGAGGTTTGTAGGGTC +
Preference number: 2 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTQLPGN*REVCRV
Trigger: GACCCTACAAACCTCCCTTCAGTTGCCCGGAAGTTG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR TCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGAGCCCAGGCCCGCTTaGAGTCACTGGGGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVEPRPA*SHWGCG
Trigger: CCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGCCCCCTGGAGCATCTTaGAGGAGGTCTGCGGACATG +
Preference number: 2 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLPPGAS*RRSADM
Trigger: CATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACCTTTGTGTTGTCCATaGAAGACCAACTTCCGGGCA +
Preference number: 2 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTPLCCP*KTNFRA
Trigger: TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp GGGGAGCTGCATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCCTGATGAACTGCCTCTaGTCCACGTGCAGGTTGTGT +
Preference number: 2 (lower is better)
Translates to: GELHWPWDAVGDSDVNPPLMNCL*STCRLC
Trigger: ACACAACCTGCACGTGGACCAGAGGCAGTTCATCAG...GGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATGCAGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
3UTR-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGACATGGGGGCTGGGTaGCAAAGGAAACACAGACCT +
Preference number: 2 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQDMGAG*QRKHRP
Trigger: AGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTC...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGTCCACTAGGACCCCCTaGAGCATCTTGGAGGAGGTC +
Preference number: 2 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKSTRTP*SILEEV
Trigger: GACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGA...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTCCCCCTGGAGCATCTTaGAGGAGGTCTGCGGACATG +
Preference number: 2 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFPPGAS*RRSADM
Trigger: CATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR TCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAGAGCCCAGGCCCGCTTaGAGTCACTGGGGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKEPRPA*SHWGCG
Trigger: CCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTC...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTTCCACTAGGACCCCCTaGAGCATCTTGGAGGAGGTC +
Preference number: 2 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFSTRTP*SILEEV
Trigger: GACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGA...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp TGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACTCAAACCACTGATGAACTGCCTCTaGTCCACGTGCAGGTTGTGT +
Preference number: 2 (lower is better)
Translates to: WDAVGDSDVNPPGSSLKPLMNCL*STCRLC
Trigger: ACACAACCTGCACGTGGACCAGAGGCAGTTCATCAG...TGGTTTGAGTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
3UTR-3UTR CCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTATCCACTAGGACCCCCTaGAGCATCTTGGAGGAGGTC +
Preference number: 2 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVSTRTP*SILEEV
Trigger: GACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGA...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGCCTTTGTGTTGTCCATaGAAGACCAACTTCCGGGCA +
Preference number: 2 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVPLCCP*KTNFRA
Trigger: TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAACCCCCTGGAGCATCTTaGAGGAGGTCTGCGGACATG +
Preference number: 2 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKPPGAS*RRSADM
Trigger: CATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGAAGGTGGCCAGCTTCCTaGAGCCCAGGCCCGCTTGAA +
Preference number: 2 (lower is better)
Translates to: QILNHPYLAQDPKICKSGRWPAS*SPGPLE
Trigger: TTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCACCT...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGACCCCCTGGAGCATCTTaGAGGAGGTCTGCGGACATG +
Preference number: 2 (lower is better)
Translates to: QILNHPYLAQDPKICKSGPPGAS*RRSADM
Trigger: CATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR TCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAACAACTTCCGGGCAACTaGAGGGAGGTTTGTAGGGTC +
Preference number: 2 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKQLPGN*REVCRV
Trigger: GACCCTACAAACCTCCCTTCAGTTGCCCGGAAGTTG...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAGACATGGGGGCTGGGTaGCAAAGGAAACACAGACCT +
Preference number: 2 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKDMGAG*QRKHRP
Trigger: AGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTC...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGATCCACTAGGACCCCCTaGAGCATCTTGGAGGAGGTC +
Preference number: 2 (lower is better)
Translates to: QILNHPYLAQDPKICKSGSTRTP*SILEEV
Trigger: GACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGA...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR TCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGACAACTTCCGGGCAACTaGAGGGAGGTTTGTAGGGTC +
Preference number: 2 (lower is better)
Translates to: QILNHPYLAQDPKICKSGQLPGN*REVCRV
Trigger: GACCCTACAAACCTCCCTTCAGTTGCCCGGAAGTTG...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR TCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGACACAGTTTCCCTCCCTaGAGCCAAGGGTGGCAAATG +
Preference number: 2 (lower is better)
Translates to: QILNHPYLAQDPKICKSGHSFPP*SQGWQM
Trigger: CATTTGCCACCCTTGGCTTCAGGGAGGGAAACTGTG...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGAGACATGGGGGCTGGGTaGCAAAGGAAACACAGACCT +
Preference number: 2 (lower is better)
Translates to: QILNHPYLAQDPKICKSGDMGAG*QRKHRP
Trigger: AGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTC...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAACCTTTGTGTTGTCCATaGAAGACCAACTTCCGGGCA +
Preference number: 2 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKPLCCP*KTNFRA
Trigger: TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CAA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACCCCCTGGAGCATCTaGGAGGAGGTCTGCGGACAT +
Preference number: 3 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDTPWSI*EEVCGH
Trigger: ATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGT...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR CCA 72 bp CATCCAGGACGGTGGGGAGGGGAGCTGCATTGGCCCTaGGACGCTGTCGGAGATTCAGATGTGAACCCTCCC +
Preference number: 3 (lower is better)
Translates to: HPGRWGGELHWP*DAVGDSDVNPP
Trigger: GGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATGCAGCTCCCCTCCCCACCGTCCTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
3UTR-3UTR CAA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAACCCCCTGGAGCATCTaGGAGGAGGTCTGCGGACAT +
Preference number: 3 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTTPWSI*EEVCGH
Trigger: ATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGT...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CAA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGGAGCCCAGGCCCGCTaGAAGTCACTGGGGCTGTGG +
Preference number: 3 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVGAQAR*KSLGLW
Trigger: CCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR TCA 72 bp AGCCAAGGGTGGCAAATGACCTTGACCCTGGCCAGGTaGGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCC +
Preference number: 3 (lower is better)
Translates to: SQGWQMTLTLAR*GQDLTASFVLS
Trigger: GGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGGTCAAGGTCATTTGCCACCCTTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CAA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACGGCCTCCTTTGTGTaGTCCATGGAAGACCAACTT +
Preference number: 3 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDTASFV*SMEDQL
Trigger: AAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGT...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR TCA 72 bp TGCATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTaGACCCTCCCGGCTCTTCACTCAAACCACAGCGGG +
Preference number: 3 (lower is better)
Translates to: CIGPGTLSEIQM*TLPALHSNHSG
Trigger: CCCGCTGTGGTTTGAGTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
3UTR CCA 72 bp GACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATaGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAA +
Preference number: 3 (lower is better)
Translates to: DPLEHLGGGLRT*GLGGKGNTDLK
Trigger: TTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CAA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGACCCCCTGGAGCATCTaGGAGGAGGTCTGCGGACAT +
Preference number: 3 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLTPWSI*EEVCGH
Trigger: ATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGT...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CAA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAACCCCCTGGAGCATCTaGGAGGAGGTCTGCGGACAT +
Preference number: 3 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQTPWSI*EEVCGH
Trigger: ATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGT...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR CCA 72 bp GAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATaGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTT +
Preference number: 3 (lower is better)
Translates to: EARTSRPPLCCP*KTNFRATEGRF
Trigger: AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
3UTR-3UTR CAA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAGGAGCCCAGGCCCGCTaGAAGTCACTGGGGCTGTGG +
Preference number: 3 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKGAQAR*KSLGLW
Trigger: CCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCC...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGGGCCGAGAGCCCACGTaGAGCCGGAGCCCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRGREPT*SRSPSV
Trigger: CACCGACGGGCTCCGGCTTCACGTGGGCTCTCGGCC...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAGGTCCCCCAGCTCCGTaGCCTCCTGGAGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGGPPAP*PPGGGP
Trigger: GGGTCCCCCTCCAGGAGGCCACGGAGCTGGGGGACC...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGCCCCTCCCTCCTaGGGGGCTCCTCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGWAPPS*GAPLSG
Trigger: GCCAGACAGAGGAGCCCCCCAGGAGGGAGGGGCCCA...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACTTGGCTGGCCCTCTGTaGGGCGGACAACCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDLAGPL*GGQPRP
Trigger: GGGACGGGGTTGTCCGCCTCACAGAGGGCCAGCCAA...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACGAGCCCAGGCCCGCTTaGAGTCACTGGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDEPRPA*SHWGCG
Trigger: CCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTC...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR GCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCAATCTGCGCGCGCTCTaGCTCTTTCCCGCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGNLRAL*LFPAPR
Trigger: GCGGGGCGCGGGAAAGAGGCAGAGCGCGCGCAGATT...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000346736.6
ENST00000672786.1
CDS-3UTR GCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAATCTGCGCGCGCTCTaGCTCTTTCCCGCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRNLRAL*LFPAPR
Trigger: GCGGGGCGCGGGAAAGAGGCAGAGCGCGCGCAGATT...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000346736.6
ENST00000672786.1
CDS-3UTR GCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACGGGCACTGTCTGCCTaGGTTGGGTCCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETRALSA*VGSPSS
Trigger: GGAGCTGGGGGACCCAACGCAGGCAGACAGTGCCCG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACCGGGCACTGTCTGCCTaGGTTGGGTCCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDRALSA*VGSPSS
Trigger: GGAGCTGGGGGACCCAACGCAGGCAGACAGTGCCCG...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAAGGGCGGGCACTGTCTaGCTGCGTTGGGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETRAGTV*LRWVPQ
Trigger: CTGGGGGACCCAACGCAGGCAGACAGTGCCCGCCCT...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAGCACAGGGCTCTGGCTaGTCTGCTCAGGGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETAQGSG*SAQGGH
Trigger: GTGCCCGCCCTGAGCAGAGCAGCCAGAGCCCTGTGC...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAAGGCAGGCCAGCCCCTaGTGTCCTTTGGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETRQASP*CPLGPS
Trigger: GGAGGGGCCCAAAGGACAGCAGGGGCTGGCCTGCCT...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAAGCTCCGTGGCCTCCTaGAGGGGGACCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTSSVAS*RGTPRV
Trigger: GACCCTGGGGGTCCCCCTCCAGGAGGCCACGGAGCT...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACATGGGCCCCTCCCTCCTaGGGGGCTCCTCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTWAPPS*GAPLSG
Trigger: GCCAGACAGAGGAGCCCCCCAGGAGGGAGGGGCCCA...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGGAGCGAGGTGCAGCCTaGCAAGGCCCTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRERGAA*QGPPVA
Trigger: GGCCACAGGAGGGCCTTGCCAGGCTGCACCTCGCTC...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCCGGAGACCCCGGGCATaGTGCGGGGGAGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LQRGRFKCQVTERAATQRRRPRA*CGGEGA
Trigger: GGCACCCTCTCCCCCGCACCATGCCCGGGGTCTCCG...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp CCGCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCGGAGACCCCGGGCATaGTGCGGGGGAGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PPLQRGRFKCQVTERAATRRPRA*CGGEGA
Trigger: GGCACCCTCTCCCCCGCACCATGCCCGGGGTCTCCG...GGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCGGAGGGTCATCAGGCTaGGAATCCCCACTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGGGSSG*ESPLPG
Trigger: GCCCGGCAGTGGGGATTCTCAGCCTGATGACCCTCC...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGATTGGCTGGCCCTCTGTaGGGCGGACAACCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGLAGPL*GGQPRP
Trigger: GGGACGGGGTTGTCCGCCTCACAGAGGGCCAGCCAA...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTCTGGAATGCCCTGCTaGGCCCCGGGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGSGMPC*APGSWR
Trigger: TCTCCAGGAGCCCGGGGCTCAGCAGGGCATTCCAGA...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGTCTGGAATGCCCTGCTaGGCCCCGGGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRSGMPC*APGSWR
Trigger: TCTCCAGGAGCCCGGGGCTCAGCAGGGCATTCCAGA...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp ACATCCAGGACGGTGGGGAGGGGAGCTGCATTGGCCCTGGGACGCTGTCGGAGAGTCTCCATTGGCATGTaGGCTGGGGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TSRTVGRGAALALGRCRRVSIGM*AGARPA
Trigger: TGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGAC...TCTCCGACAGCGTCCCAGGGCCAATGCAGCTCCCCTCCCCACCGTCCTGGATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR TCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAGAGCCCAGGCCCGCTTaGAGTCACTGGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTEPRPA*SHWGCG
Trigger: CCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTC...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAGGGCGGGCACTGTCTaGCTGCGTTGGGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGRAGTV*LRWVPQ
Trigger: CTGGGGGACCCAACGCAGGCAGACAGTGCCCGCCCT...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACGGGCTCTGGCTGCTCTaGTCAGGGCGGGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDGLWLL*SGRALS
Trigger: AGACAGTGCCCGCCCTGAGCAGAGCAGCCAGAGCCC...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAGCTGAGAATCCCCACTaGCGGGCACCGCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETAENPH*RAPPAQ
Trigger: CTGTGCAGGCGGTGCCCGGCAGTGGGGATTCTCAGC...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCGCTGAGAATCCCCACTaGCGGGCACCGCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGAENPH*RAPPAQ
Trigger: CTGTGCAGGCGGTGCCCGGCAGTGGGGATTCTCAGC...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACTCTCCGCTCCCAGGTaGCAGAGCCAGGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETLSAPR*QSQGGC
Trigger: ACAGCCTCCCTGGCTCTGGCACCTGGGAGCGGAGAG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGAGCTCCGTGGCCTCCTaGAGGGGGACCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKSSVAS*RGTPRV
Trigger: GACCCTGGGGGTCCCCCTCCAGGAGGCCACGGAGCT...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAACTGTCTGCCTGCGTTaGGTCCCCCAGCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETTVCLR*VPQLRG
Trigger: GCCACGGAGCTGGGGGACCCAACGCAGGCAGACAGT...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACTGTCTGCCTGCGTTaGGTCCCCCAGCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDTVCLR*VPQLRG
Trigger: GCCACGGAGCTGGGGGACCCAACGCAGGCAGACAGT...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCCCCTACCCATCCTGCTaGGGGTCTGCTGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGPYPSC*GSAGGQ
Trigger: CTGACCCCCAGCAGACCCCCAGCAGGATGGGTAGGG...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACCCCTACCCATCCTGCTaGGGGTCTGCTGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDPYPSC*GSAGGQ
Trigger: CTGACCCCCAGCAGACCCCCAGCAGGATGGGTAGGG...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAGGCTCGGCTGGGCCTTaGCCACTGCAACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETGSAGP*PLQQGL
Trigger: GAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGCC...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000588115.5
ENST00000672786.1
ENST00000672796.1
CDS-3UTR CCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACGCTTCCAGGTCCCGGTaGGTGCCCATGATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDASRSR*VPMISR
Trigger: CCGGCTGATCATGGGCACCCACCGGGACCTGGAAGC...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCAGGACGGTGGGGAGGGGAGCTGCATTGGCCCTGGGACGCTGTCGGAGATTCAGGAGGGGAGCTGCATTaGCCCTGGGACGCTGTCGGA +
Preference number: 4 (lower is better)
Translates to: PGRWGGELHWPWDAVGDSGGELH*PWDAVG
Trigger: TCCGACAGCGTCCCAGGGCCAATGCAGCTCCCCTCC...TGAATCTCCGACAGCGTCCCAGGGCCAATGCAGCTCCCCTCCCCACCGTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCGCCCTCACAGAACGCTaGAGGCCTCGAGTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGALTER*RPRVRR
Trigger: CCTCCGGACTCGAGGCCTCCAGCGTTCTGTGAGGGC...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR TCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCGGCTCCTTTTCTGGTTaGCGGAGGAGCCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGGSFSG*RRSRQG
Trigger: TCCCTGCCGGCTCCTCCGTCAACCAGAAAAGGAGCC...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGTTGGCTGGCCCTCTGTaGGGCGGACAACCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKLAGPL*GGQPRP
Trigger: GGGACGGGGTTGTCCGCCTCACAGAGGGCCAGCCAA...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGACCTGGGAGAGGCAGGTaGTATGGCACTGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGPGRGR*YGTGLP
Trigger: GGGCAGGCCAGTGCCATATCACCTGCCTCTCCCAGG...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCGTGTCCGGGGATGCATaGCCGGAATCTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGVSGDA*PESPAP
Trigger: GGGTGCTGGAGATTCCGGTCATGCATCCCCGGACAC...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAGTCTCCATTGGCATGTaGGCTGGGGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGVSIGM*AGARPA
Trigger: TGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGAC...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAGTCTCCATTGGCATGTaGGCTGGGGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTVSIGM*AGARPA
Trigger: TGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGAC...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGGAGCCCAGGCCCGCTTaGAGTCACTGGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKEPRPA*SHWGCG
Trigger: CCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTC...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAGGGCTCTGGCTGCTCTaGTCAGGGCGGGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTGLWLL*SGRALS
Trigger: AGACAGTGCCCGCCCTGAGCAGAGCAGCCAGAGCCC...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGCTTCCCTACCCATCCTaGTGGGGGTCTGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRLPYPS*WGSAGG
Trigger: ACCCCCAGCAGACCCCCAGCAGGATGGGTAGGGAAG...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCCTTCCCTACCCATCCTaGTGGGGGTCTGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGLPYPS*WGSAGG
Trigger: ACCCCCAGCAGACCCCCAGCAGGATGGGTAGGGAAG...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACTTCCCTACCCATCCTaGTGGGGGTCTGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETLPYPS*WGSAGG
Trigger: ACCCCCAGCAGACCCCCAGCAGGATGGGTAGGGAAG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCGGGGGCTTGCCATCCTaGCCTGCCTCCCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGGGLPS*PASPLS
Trigger: AGAAAGTGGGGAGGCAGGGCAGGATGGCAAGCCCCC...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACTCTCCGCTCCCAGGTaGCAGAGCCAGGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTLSAPR*QSQGGC
Trigger: ACAGCCTCCCTGGCTCTGGCACCTGGGAGCGGAGAG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAAGGTGGTGTCTGGAATaGCCTGCTGAGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETRWCLE*PAEPRA
Trigger: AGCCCGGGGCTCAGCAGGGCATTCCAGACACCACCT...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCAGGTGGTGTCTGGAATaGCCTGCTGAGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGRWCLE*PAEPRA
Trigger: AGCCCGGGGCTCAGCAGGGCATTCCAGACACCACCT...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGGGAGACGGCCTTTCCTaGTTCCTCCCCGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRGDGLS*FLPVLL
Trigger: CAGCAGCACGGGGAGGAACCAGGAAAGGCCGTCTCC...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGCAGGTGATATGGCACTaGCCTGCCCATCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRQVIWH*PAHRAQ
Trigger: CTGGGCCCGATGGGCAGGCCAGTGCCATATCACCTG...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACCAGGTGATATGGCACTaGCCTGCCCATCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDQVIWH*PAHRAQ
Trigger: CTGGGCCCGATGGGCAGGCCAGTGCCATATCACCTG...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTGAGCGAGGTGCAGCCTaGCAAGGCCCTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: ERQVQVPGNREGSHPALAERGAA*QGPPVA
Trigger: GGCCACAGGAGGGCCTTGCCAGGCTGCACCTCGCTC...AGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp AGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTTCGGAGCGAGGTGCAGCCTaGCAAGGCCCTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: RQVQVPGNREGSHPALASERGAA*QGPPVA
Trigger: GGCCACAGGAGGGCCTTGCCAGGCTGCACCTCGCTC...CGAAGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGACATTGGCATGTGAGCTaGGGCCCGGCCAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGHWHVS*GPASKG
Trigger: GCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATG...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAGCTTCCAGGTCCCGGTaGGTGCCCATGATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTASRSR*VPMISR
Trigger: CCGGCTGATCATGGGCACCCACCGGGACCTGGAAGC...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAGGAGGTCTGCGGACATaGGGGCTGGGTGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETGGLRT*GLGGKG
Trigger: TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCC...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAGGTGGCCAGCTTCCTaGAGCCCAGGCCCGCTTGAA +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRRWPAS*SPGPLE
Trigger: TTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCACCT...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCAGGACGGTGGGGAGGGGAGCTGCATTGGCCCTGGGACGCTGTCGGAGATTCACTCTCGGCTGGGCCTTaGCCACTGCAACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PGRWGGELHWPWDAVGDSLSAGP*PLQQGL
Trigger: GAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGAG...TGAATCTCCGACAGCGTCCCAGGGCCAATGCAGCTCCCCTCCCCACCGTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGGGCCACGCACGACGTTaGTGGCATCCTCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRGHARR*WHPPSW
Trigger: CCAGGATGGAGGATGCCACCAACGTCGTGCGTGGCC...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCGGCCACGCACGACGTTaGTGGCATCCTCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGGHARR*WHPPSW
Trigger: CCAGGATGGAGGATGCCACCAACGTCGTGCGTGGCC...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTAGGACGGCTCACTGGTaGCCTCGGCTGGGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ERQVQVPGNREGSHPALARTAHW*PRLGLG
Trigger: GCCAAGGCCCAGCCGAGGCCACCAGTGAGCCGTCCT...AGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAGGCTCCTTTTCTGGTTaGCGGAGGAGCCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGGSFSG*RRSRQG
Trigger: TCCCTGCCGGCTCCTCCGTCAACCAGAAAAGGAGCC...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCGCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCCTGGGAGAGGCAGGTaGTATGGCACTGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PPLQRGRFKCQVTERAATPGRGR*YGTGLP
Trigger: GGGCAGGCCAGTGCCATATCACCTGCCTCTCCCAGG...GGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACTGTGGTTTCCCCAGTaGGCGAGGTGCAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTLWFPQ*ARCSLA
Trigger: TGCCAGGCTGCACCTCGCTCACTGGGGAAACCACAG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAGTGTCCGGGGATGCATaGCCGGAATCTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTVSGDA*PESPAP
Trigger: GGGTGCTGGAGATTCCGGTCATGCATCCCCGGACAC...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp AGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTTCGTCTGGAATGCCCTGCTaGGCCCCGGGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RQVQVPGNREGSHPALASSGMPC*APGSWR
Trigger: TCTCCAGGAGCCCGGGGCTCAGCAGGGCATTCCAGA...CGAAGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACTGGAGAGCTCAACGATaGGGCCACGCACGACGTTGG +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDWRAQR*GHARRW
Trigger: CCAACGTCGTGCGTGGCCTCATCGTTGAGCTCTCCA...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR GCA 90 bp AGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTTCGGATATGGCACTGGCCTaGCCATCGGGCCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: RQVQVPGNREGSHPALASDMALA*PSGPAT
Trigger: GGTGGCTGGGCCCGATGGGCAGGCCAGTGCCATATC...CGAAGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGGATATGGCACTGGCCTaGCCATCGGGCCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKDMALA*PSGPAT
Trigger: GGTGGCTGGGCCCGATGGGCAGGCCAGTGCCATATC...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCGCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCTCTCCGCTCCCAGGTaGCAGAGCCAGGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PPLQRGRFKCQVTERAATLSAPR*QSQGGC
Trigger: ACAGCCTCCCTGGCTCTGGCACCTGGGAGCGGAGAG...GGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAGCACAACAGAGGCTTaGGGGGACACACGGAACCCC +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDSTTEA*GDTRNP
Trigger: GGGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCT...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAGCACAACAGAGGCTTaGGGGGACACACGGAACCCC +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRSTTEA*GDTRNP
Trigger: GGGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCT...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAGGTGGTGTCTGGAATaGCCTGCTGAGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGRWCLE*PAEPRA
Trigger: AGCCCGGGGCTCAGCAGGGCATTCCAGACACCACCT...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCCTGGGCCTTGGCCACTaGAACAGGGTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGLGLGH*NRVSIG
Trigger: GCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAG...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCAGGACGGTGGGGAGGGGAGCTGCATTGGCCCTGGGACGCTGTCGGAGATTCAGCCGCTCTGATGAACTaGCTCTGGTCCACGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGRWGGELHWPWDAVGDSAALMN*LWSTCR
Trigger: CCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGC...TGAATCTCCGACAGCGTCCCAGGGCCAATGCAGCTCCCCTCCCCACCGTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAGGAGACGGCCTTTCCTaGTTCCTCCCCGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGGDGLS*FLPVLL
Trigger: CAGCAGCACGGGGAGGAACCAGGAAAGGCCGTCTCC...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCGTCTCCACTAGCAGCTaGCATCCTGGACTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGVSTSS*HPGLWA
Trigger: CGCCCAGAGTCCAGGATGCCAGCTGCTAGTGGAGAC...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGAGCTCCGTGGCCTCCTaGAGGGGGACCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQSSVAS*RGTPRV
Trigger: GACCCTGGGGGTCCCCCTCCAGGAGGCCACGGAGCT...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACCCCGTCCCCCTGTCTaGAGGGTCATCAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTPRPPV*RVIRLR
Trigger: TCTCAGCCTGATGACCCTCCAGACAGGGGGACGGGG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAGGTGGTCTTGGCTaGCCCTCTGTGAGGCGGACA +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDTGGLG*PSVRRT
Trigger: TGTCCGCCTCACAGAGGGCCAGCCAAGACCACCTGT...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTCTGACAGGTGGTCTTaGCTGGCCCTCTGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGSDRWS*LALCEA
Trigger: CGCCTCACAGAGGGCCAGCCAAGACCACCTGTCAGA...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGTGGGCCCCTCCCTCCTaGGGGGCTCCTCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWWAPPS*GAPLSG
Trigger: GCCAGACAGAGGAGCCCCCCAGGAGGGAGGGGCCCA...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTCCCTACCCATCCTGCTaGGGGTCTGCTGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ERQVQVPGNREGSHPALAPYPSC*GSAGGQ
Trigger: CTGACCCCCAGCAGACCCCCAGCAGGATGGGTAGGG...AGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp AGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTTCGCCCTACCCATCCTGCTaGGGGTCTGCTGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RQVQVPGNREGSHPALASPYPSC*GSAGGQ
Trigger: CTGACCCCCAGCAGACCCCCAGCAGGATGGGTAGGG...CGAAGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGACAGGTGATATGGCACTaGCCTGCCCATCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGQVIWH*PAHRAQ
Trigger: CTGGGCCCGATGGGCAGGCCAGTGCCATATCACCTG...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACCTCCAGCACCCATCATaGACTCTCCGCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDLQHPS*TLRSQV
Trigger: CACCTGGGAGCGGAGAGTCCATGATGGGTGCTGGAG...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAATCAGCCGGCTCGGCTaGGCCTTGGCCACTGCAACA +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGISRLG*ALATAT
Trigger: TGTTGCAGTGGCCAAGGCCCAGCCGAGCCGGCTGAT...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000588115.5
ENST00000672786.1
ENST00000672796.1
CDS-3UTR CCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGGCTTCCAGGTCCCGGTaGGTGCCCATGATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKASRSR*VPMISR
Trigger: CCGGCTGATCATGGGCACCCACCGGGACCTGGAAGC...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGCCCCCTGGAGCATCTTaGAGGAGGTCTGCGGACATG +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRPPGAS*RRSADM
Trigger: CATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCCCCCCTGGAGCATCTTaGAGGAGGTCTGCGGACATG +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGPPGAS*RRSADM
Trigger: CATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGGCCCTCACAGAACGCTaGAGGCCTCGAGTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKALTER*RPRVRR
Trigger: CCTCCGGACTCGAGGCCTCCAGCGTTCTGTGAGGGC...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACATCCTCGGCTGGGCCTTaGCCACTGCAACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTSSAGP*PLQQGL
Trigger: GAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGGA...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCACGAAGGTCCTCGGCTaGGCCTTGGCCACTGCAACA +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGTKVLG*ALATAT
Trigger: TGTTGCAGTGGCCAAGGCCCAGCCGAGGACCTTCGT...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAGAGGCCTCAGAGGCCTaGATCCCCACGAAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGEASEA*IPTKVL
Trigger: GAGGACCTTCGTGGGGATCCAGGCCTCTGAGGCCTC...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGTGGCATCCTCCATCCTaGAGGCCTCAGAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRWHPPS*RPQRPG
Trigger: TCCAGGCCTCTGAGGCCTCCAGGATGGAGGATGCCA...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACGCACGACGTTGGTaGCATCCTCCATCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETHARRW*HPPSWR
Trigger: CCTCCAGGATGGAGGATGCCACCAACGTCGTGCGTG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCGCCTCGGCTGGGCCTTaGCCACTGCAACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LQRGRFKCQVTERAATQRASAGP*PLQQGL
Trigger: GAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGGC...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp TCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGAGGACGGCTCACTGGTaGCCTCGGCTGGGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SAERQVQVPGNREGSHPARTAHW*PRLGLG
Trigger: GCCAAGGCCCAGCCGAGGCCACCAGTGAGCCGTCCT...CGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp AGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTTCGTGGAGGACGGCTCACTaGTGGCCTCGGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: RQVQVPGNREGSHPALASWRTAH*WPRLGL
Trigger: AAGGCCCAGCCGAGGCCACCAGTGAGCCGTCCTCCA...CGAAGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp GAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTTGGAGGACGGCTCACTaGTGGCCTCGGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: ERQVQVPGNREGSHPALAWRTAH*WPRLGL
Trigger: AAGGCCCAGCCGAGGCCACCAGTGAGCCGTCCTCCA...AGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGTCCCGCCCCGCGCATaGGCGACGCAAACACCGCCC +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVVPPRA*ATQTPP
Trigger: GGGCGGTGTTTGCGTCGCTCATGCGCGGGGCGGGAC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346736.6
ENST00000672786.1
CDS-3UTR TCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGGGCTCCTTTTCTGGTTaGCGGAGGAGCCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKGSFSG*RRSRQG
Trigger: TCCCTGCCGGCTCCTCCGTCAACCAGAAAAGGAGCC...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR TCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCATTGGCTGGCCCTCTGTaGGGCGGACAACCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRALAGPL*GGQPRP
Trigger: GGGACGGGGTTGTCCGCCTCACAGAGGGCCAGCCAA...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp GCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCACCTGGGAGAGGCAGGTaGTATGGCACTGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ASAERQVQVPGNREGSHPPGRGR*YGTGLP
Trigger: GGGCAGGCCAGTGCCATATCACCTGCCTCTCCCAGG...TGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp AGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTTCGCTGTGGTTTCCCCAGTaGGCGAGGTGCAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RQVQVPGNREGSHPALASLWFPQ*ARCSLA
Trigger: TGCCAGGCTGCACCTCGCTCACTGGGGAAACCACAG...CGAAGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGGTGTCCGGGGATGCATaGCCGGAATCTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKVSGDA*PESPAP
Trigger: GGGTGCTGGAGATTCCGGTCATGCATCCCCGGACAC...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAAACTCGGCTTCCTCTTaGGCAGGACCTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTNSASS*AGPGSC
Trigger: GCAGGAGCCAGGTCCTGCTCAAGAGGAAGCCGAGTT...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp TCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGTCTGGAATGCCCTGCTaGGCCCCGGGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SAERQVQVPGNREGSHPASGMPC*APGSWR
Trigger: TCTCCAGGAGCCCGGGGCTCAGCAGGGCATTCCAGA...CGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp TCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGGTCTCCATTGGCATGTaGGCTGGGGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SAERQVQVPGNREGSHPAVSIGM*AGARPA
Trigger: TGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGAC...CGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp CGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACTCAAACCACAGCGGGCCGCGTCTCCATTGGCATGTaGGCTGGGGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RRFRCEPSRLFTQTTAGRVSIGM*AGARPA
Trigger: TGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGAC...GCGGCCCGCTGTGGTTTGAGTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR GCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAGGTTCCTCCCCGTGCTaGTGTGTAGAGGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETGSSPC*CVEGTG
Trigger: ACCTGTTCCCTCTACACAGCAGCACGGGGAGGAACC...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCCCTGGTTCCTCCCCGTaGTGCTGTGTAGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGPGSSP*CCVEGT
Trigger: TGTTCCCTCTACACAGCAGCACGGGGAGGAACCAGG...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCACGGGCACTGTCTGCCTaGGTTGGGTCCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRARALSA*VGSPSS
Trigger: GGAGCTGGGGGACCCAACGCAGGCAGACAGTGCCCG...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAGCACAGGGCTCTGGCTaGTCTGCTCAGGGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAAQGSG*SAQGGH
Trigger: GTGCCCGCCCTGAGCAGAGCAGCCAGAGCCCTGTGC...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGAGGCAGGCCAGCCCCTaGTGTCCTTTGGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQRQASP*CPLGPS
Trigger: GGAGGGGCCCAAAGGACAGCAGGGGCTGGCCTGCCT...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGAGGCAGGCCAGCCCCTaGTGTCCTTTGGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWRQASP*CPLGPS
Trigger: GGAGGGGCCCAAAGGACAGCAGGGGCTGGCCTGCCT...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCGCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCTTCCCTACCCATCCTaGTGGGGGTCTGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PPLQRGRFKCQVTERAATLPYPS*WGSAGG
Trigger: ACCCCCAGCAGACCCCCAGCAGGATGGGTAGGGAAG...GGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp CCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGGATATGGCACTGGCCTaGCCATCGGGCCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PLQRGRFKCQVTERAATQDMALA*PSGPAT
Trigger: GGTGGCTGGGCCCGATGGGCAGGCCAGTGCCATATC...CTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACTTGCCATCCTGCCCTaGCTCCCCACTTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETLAILP*LPTFSC
Trigger: ACAGGAGAAAGTGGGGAGGCAGGGCAGGATGGCAAG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACCTTGCCATCCTGCCCTaGCTCCCCACTTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDLAILP*LPTFSC
Trigger: ACAGGAGAAAGTGGGGAGGCAGGGCAGGATGGCAAG...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTGGGGGCTTGCCATCCTaGCCTGCCTCCCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: ERQVQVPGNREGSHPALAGGLPS*PASPLS
Trigger: AGAAAGTGGGGAGGCAGGGCAGGATGGCAAGCCCCC...AGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp TCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTCTCCGCTCCCAGGTaGCAGAGCCAGGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SAERQVQVPGNREGSHPALSAPR*QSQGGC
Trigger: ACAGCCTCCCTGGCTCTGGCACCTGGGAGCGGAGAG...CGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGACCTGTGTCCGGGGATaGATGACCGGAATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRTCVRG*MTGISS
Trigger: GCTGGAGATTCCGGTCATGCATCCCCGGACACAGGT...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAGCACAACAGAGGCTTaGGGGGACACACGGAACCCC +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGSTTEA*GDTRNP
Trigger: GGGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCT...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCAGGTGGTGTCTGGAATaGCCTGCTGAGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LQRGRFKCQVTERAATQRRWCLE*PAEPRA
Trigger: AGCCCGGGGCTCAGCAGGGCATTCCAGACACCACCT...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp CCCGGCTCTTCACTCAAACCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCAGGTGGTGTCTGGAATaGCCTGCTGAGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: PGSSLKPQRAALMNCLWSRWCLE*PAEPRA
Trigger: AGCCCGGGGCTCAGCAGGGCATTCCAGACACCACCT...GGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTGAGTGAAGAGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR GCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACCAGGTGCCCTGGTCTaGAGAATGAGGCAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTPGALV*RMRQVV
Trigger: GACCACCTGCCTCATTCTGCAGACCAGGGCACCTGG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGACCAGGTGCCCTGGTCTaGAGAATGAGGCAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGPGALV*RMRQVV
Trigger: GACCACCTGCCTCATTCTGCAGACCAGGGCACCTGG...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CAGACATCCAGGACGGTGGGGAGGGGAGCTGCATTGGCCCTGGGACGCTGTCGGAAGAGTCTGCCCAGGTaGCCTGGTCTGCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: QTSRTVGRGAALALGRCRKSLPR*PGLQNE
Trigger: CTCATTCTGCAGACCAGGGCACCTGGGCAGACTCTT...CCGACAGCGTCCCAGGGCCAATGCAGCTCCCCTCCCCACCGTCCTGGATGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR GCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGCCCGAAGGAAAGAGCTaGTCAGGTGGGGCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRPEGKS*SGGASK
Trigger: CTTCGAAGCCCCACCTGAGCAGCTCTTTCCTTCGGG...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACCCGAAGGAAAGAGCTaGTCAGGTGGGGCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETPEGKS*SGGASK
Trigger: CTTCGAAGCCCCACCTGAGCAGCTCTTTCCTTCGGG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCCCCGAAGGAAAGAGCTaGTCAGGTGGGGCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGPEGKS*SGGASK
Trigger: CTTCGAAGCCCCACCTGAGCAGCTCTTTCCTTCGGG...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACTGGGCCTTGGCCACTaGAACAGGGTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTLGLGH*NRVSIG
Trigger: GCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACCCTCATCAGGGGAGCTaGAGACGGCCTTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDPHQGS*RRPFLV
Trigger: AACCAGGAAAGGCCGTCTCCAGCTCCCCTGATGAGG...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACCTCATCAGGGGAGCTaGAGACGGCCTTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETPHQGS*RRPFLV
Trigger: AACCAGGAAAGGCCGTCTCCAGCTCCCCTGATGAGG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGGTCCCCCAGCTCCGTaGCCTCCTGGAGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVGPPAP*PPGGGP
Trigger: GGGTCCCCCTCCAGGAGGCCACGGAGCTGGGGGACC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAACAGGTGGTCTTGGCTaGCCCTCTGTGAGGCGGACA +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTTGGLG*PSVRRT
Trigger: TGTCCGCCTCACAGAGGGCCAGCCAAGACCACCTGT...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAGGGGGCTCCTCTGTCTaGCTTCTCCCCTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETGGSSV*LLPFRI
Trigger: GATTCTGAAGGGGAGAAGCCAGACAGAGGAGCCCCC...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCCAGGTGATATGGCACTaGCCTGCCCATCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LQRGRFKCQVTERAATQRQVIWH*PAHRAQ
Trigger: CTGGGCCCGATGGGCAGGCCAGTGCCATATCACCTG...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGAGAGCGAGGTGCAGCCTaGCAAGGCCCTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGERGAA*QGPPVA
Trigger: GGCCACAGGAGGGCCTTGCCAGGCTGCACCTCGCTC...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACTCCAGCACCCATCATaGACTCTCCGCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTLQHPS*TLRSQV
Trigger: CACCTGGGAGCGGAGAGTCCATGATGGGTGCTGGAG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp TCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCATTGGCATGTGAGCTaGGGCCCGGCCAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SAERQVQVPGNREGSHPAHWHVS*GPASKG
Trigger: GCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATG...CGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp GCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCACATTGGCATGTGAGCTaGGGCCCGGCCAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: ASAERQVQVPGNREGSHPHWHVS*GPASKG
Trigger: GCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATG...TGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGTGCGGACATGGGGGCTaGGTGGCAAAGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRCGHGG*VAKETQ
Trigger: CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCA...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGCGGACATGGGGGCTaGGTGGCAAAGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGCGHGG*VAKETQ
Trigger: CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCA...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGAGGTGGCCAGCTTCCTaGAGCCCAGGCCCGCTTGAA +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKRWPAS*SPGPLE
Trigger: TTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCACCT...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGACAAATCCGGACAGGATaGGCCCTGCTCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGQIRTG*ALLRGG
Trigger: GCCACCTCTGAGCAGGGCCCATCCTGTCCGGATTTG...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp ACCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGGTTGTGTGTAGCCGCCCTCTCGGCTaGGCCTTGGCCACTGCAACA +
Preference number: 4 (lower is better)
Translates to: TTAGRSDELPLVHVQVVCSRPLG*ALATAT
Trigger: TGTTGCAGTGGCCAAGGCCCAGCCGAGAGGGCGGCT...ACACACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGATGGCATCCTCCATCCTaGAGGCCTCAGAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGWHPPS*RPQRPG
Trigger: TCCAGGCCTCTGAGGCCTCCAGGATGGAGGATGCCA...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACACGCACGACGTTGGTaGCATCCTCCATCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTHARRW*HPPSWR
Trigger: CCTCCAGGATGGAGGATGCCACCAACGTCGTGCGTG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGGCCTCGGCTGGGCCTTaGCCACTGCAACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PLQRGRFKCQVTERAATQASAGP*PLQQGL
Trigger: GAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGGC...CTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGGGAGGGTCATCAGGCTaGGAATCCCCACTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWGGSSG*ESPLPG
Trigger: GCCCGGCAGTGGGGATTCTCAGCCTGATGACCCTCC...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGAGGAGGGTCATCAGGCTaGGAATCCCCACTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGGGSSG*ESPLPG
Trigger: GCCCGGCAGTGGGGATTCTCAGCCTGATGACCCTCC...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGCCTGGGAGAGGCAGGTaGTATGGCACTGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWPGRGR*YGTGLP
Trigger: GGGCAGGCCAGTGCCATATCACCTGCCTCTCCCAGG...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCTGTGGTTTCCCCAGTaGGCGAGGTGCAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PLQRGRFKCQVTERAATQLWFPQ*ARCSLA
Trigger: TGCCAGGCTGCACCTCGCTCACTGGGGAAACCACAG...CTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp CCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGGTGTCCGGGGATGCATaGCCGGAATCTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: PLQRGRFKCQVTERAATQVSGDA*PESPAP
Trigger: GGGTGCTGGAGATTCCGGTCATGCATCCCCGGACAC...CTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp TCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGGTGTCCGGGGATGCATaGCCGGAATCTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: SAERQVQVPGNREGSHPAVSGDA*PESPAP
Trigger: GGGTGCTGGAGATTCCGGTCATGCATCCCCGGACAC...CGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAGCTCCTGCTTCTGATTaGCACATGGACCTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETAPASD*HMDLCP
Trigger: CGGACACAGGTCCATGTGTCAATCAGAAGCAGGAGC...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCGCTCCTGCTTCTGATTaGCACATGGACCTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGAPASD*HMDLCP
Trigger: CGGACACAGGTCCATGTGTCAATCAGAAGCAGGAGC...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACCCTGGCTCCTGCTTCTaGTTGACACATGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDPGSCF*LTHGPV
Trigger: CACAGGTCCATGTGTCAATCAGAAGCAGGAGCCAGG...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCGCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCAACTCGGCTTCCTCTTaGGCAGGACCTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PPLQRGRFKCQVTERAATNSASS*AGPGSC
Trigger: GCAGGAGCCAGGTCCTGCTCAAGAGGAAGCCGAGTT...GGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGTCTGGAATGCCCTGCTaGGCCCCGGGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQSGMPC*APGSWR
Trigger: TCTCCAGGAGCCCGGGGCTCAGCAGGGCATTCCAGA...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGAGTCTCCATTGGCATGTaGGCTGGGGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGVSIGM*AGARPA
Trigger: TGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGAC...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAGTCTCCATTGGCATGTaGGCTGGGGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAVSIGM*AGARPA
Trigger: TGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGAC...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGCAACTTCCGGGCAACTaGAGGGAGGTTTGTAGGGTC +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRQLPGN*REVCRV
Trigger: GACCCTACAAACCTCCCTTCAGTTGCCCGGAAGTTG...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGAGCCCAGGCCCGCTTaGAGTCACTGGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQEPRPA*SHWGCG
Trigger: CCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTC...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGGAGCCCAGGCCCGCTTaGAGTCACTGGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLEPRPA*SHWGCG
Trigger: CCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTC...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGGCCGGAGCCCGTCGGTaGCTGACAGACGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWAGARR*LTDALN
Trigger: GTTCAGAGCGTCTGTCAGTCACCGACGGGCTCCGGC...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR TCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACGGCCACAGAAGTCGTTaGGGACCCTCTGTCCTTATC +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDGHRSR*GPSVLI
Trigger: GATAAGGACAGAGGGTCCTCAACGACTTCTGTGGCC...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR TCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCACCCGGTGGGTGCCCATaGTCAGCCGGTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAPGGCP*SAGSGW
Trigger: CCAACCTGAACCGGCTGATCATGGGCACCCACCGGG...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR TCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGCCCGGTGGGTGCCCATaGTCAGCCGGTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWPGGCP*SAGSGW
Trigger: CCAACCTGAACCGGCTGATCATGGGCACCCACCGGG...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR GCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACGAACAGGTCCCAATTTaGCCTCTGGCTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDEQVPI*PLAPQG
Trigger: ACCCTGAGGAGCCAGAGGGCAAATTGGGACCTGTTC...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAGGTTCCTCCCCGTGCTaGTGTGTAGAGGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTGSSPC*CVEGTG
Trigger: ACCTGTTCCCTCTACACAGCAGCACGGGGAGGAACC...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACCTGGTTCCTCCCCGTaGTGCTGTGTAGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTPGSSP*CCVEGT
Trigger: TGTTCCCTCTACACAGCAGCACGGGGAGGAACCAGG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAGGGCGGGCACTGTCTaGCTGCGTTGGGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLRAGTV*LRWVPQ
Trigger: CTGGGGGACCCAACGCAGGCAGACAGTGCCCGCCCT...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCACTTCCCTACCCATCCTaGTGGGGGTCTGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: ASAERQVQVPGNREGSHPLPYPS*WGSAGG
Trigger: ACCCCCAGCAGACCCCCAGCAGGATGGGTAGGGAAG...TGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCGTCTGTGCTCAGGTCTaGGATGACAACCATCCCGAG +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGVCAQV*DDNHPE
Trigger: CTCGGGATGGTTGTCATCGCAGACCTGAGCACAGAC...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp TCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGGGGGGCTTGCCATCCTaGCCTGCCTCCCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: SAERQVQVPGNREGSHPAGGLPS*PASPLS
Trigger: AGAAAGTGGGGAGGCAGGGCAGGATGGCAAGCCCCC...CGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACTCTCCGCTCCCAGGTaGCAGAGCCAGGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGLSAPR*QSQGGC
Trigger: ACAGCCTCCCTGGCTCTGGCACCTGGGAGCGGAGAG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCGCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCAGCACAACAGAGGCTTaGGGGGACACACGGAACCCC +
Preference number: 4 (lower is better)
Translates to: PPLQRGRFKCQVTERAATSTTEA*GDTRNP
Trigger: GGGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCT...GGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCAGCACAACAGAGGCTTaGGGGGACACACGGAACCCC +
Preference number: 4 (lower is better)
Translates to: LQRGRFKCQVTERAATQRSTTEA*GDTRNP
Trigger: GGGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCT...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp CCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGAGGTGGTGTCTGGAATaGCCTGCTGAGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: PLQRGRFKCQVTERAATQRWCLE*PAEPRA
Trigger: AGCCCGGGGCTCAGCAGGGCATTCCAGACACCACCT...CTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp GAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTCCAGGTGCCCTGGTCTaGAGAATGAGGCAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: ERQVQVPGNREGSHPALAPGALV*RMRQVV
Trigger: GACCACCTGCCTCATTCTGCAGACCAGGGCACCTGG...AGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCCCAGGTGCCCTGGTCTaGAGAATGAGGCAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LQRGRFKCQVTERAATQRPGALV*RMRQVV
Trigger: GACCACCTGCCTCATTCTGCAGACCAGGGCACCTGG...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGCTGGGCCTTGGCCACTaGAACAGGGTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKLGLGH*NRVSIG
Trigger: GCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAG...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCGCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCTGGGCCTTGGCCACTaGAACAGGGTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: PPLQRGRFKCQVTERAATLGLGH*NRVSIG
Trigger: GCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAG...GGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACCTCATCAGGGGAGCTaGAGACGGCCTTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTPHQGS*RRPFLV
Trigger: AACCAGGAAAGGCCGTCTCCAGCTCCCCTGATGAGG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAAGCTGGCTCCTTTTCTaGTTGACGGAGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTSWLLF*LTEEPA
Trigger: TGCCGGCTCCTCCGTCAACCAGAAAAGGAGCCAGCT...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAGGAGGAAGGGGAGCTaGCTCCTTTTCTGGTTGACG +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDRRKGS*LLFWLT
Trigger: CGTCAACCAGAAAAGGAGCCAGCTCCCCTTCCTCCT...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGCTGGACTCTGGGCGCTaGACTCTGCGATTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRLDSGR*TLRLFP
Trigger: TGGAAACAATCGCAGAGTCCAGCGCCCAGAGTCCAG...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGATGGCATCCTGGACTCTaGGCGCTGGACTCTGCGATT +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGWHPGL*ALDSAI
Trigger: AATCGCAGAGTCCAGCGCCCAGAGTCCAGGATGCCA...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACATTGGCCACCGTCACCTaGAACCCTGTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTLATVT*NPVCLR
Trigger: CCTGAGACAGACAGGGTTCCAGGTGACGGTGGCCAA...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGATTGGCCACCGTCACCTaGAACCCTGTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGLATVT*NPVCLR
Trigger: CCTGAGACAGACAGGGTTCCAGGTGACGGTGGCCAA...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAGGTAGGTGTTCCTTTTaGCCACCGTCACCTGGAACC +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETGRCSF*PPSPGT
Trigger: GGTTCCAGGTGACGGTGGCCAAAAGGAACACCTACC...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACATCTCTTCCAGCTCAGTaGGGTCTGTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETSLPAQ*GLCSGL
Trigger: CAGACCTGAGCACAGACCCCACTGAGCTGGAAGAGA...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTCTCTTCCAGCTCAGTaGGGTCTGTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGSLPAQ*GLCSGL
Trigger: CAGACCTGAGCACAGACCCCACTGAGCTGGAAGAGA...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCAGGTGATATGGCACTaGCCTGCCCATCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PLQRGRFKCQVTERAATQQVIWH*PAHRAQ
Trigger: CTGGGCCCGATGGGCAGGCCAGTGCCATATCACCTG...CTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGGAGCGAGGTGCAGCCTaGCAAGGCCCTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLERGAA*QGPPVA
Trigger: GGCCACAGGAGGGCCTTGCCAGGCTGCACCTCGCTC...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTCTCCAGCACCCATCATaGACTCTCCGCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: ERQVQVPGNREGSHPALALQHPS*TLRSQV
Trigger: CACCTGGGAGCGGAGAGTCCATGATGGGTGCTGGAG...AGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAGGGCATCCTGTATCTaGCTGTCCAGCAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDRASCI*LSSRKS
Trigger: CGACTTCCTGCTGGACAGCCAGATACAGGATGCCCT...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp TTCACTCAAACCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGCATTGGCATGTGAGCTaGGGCCCGGCCAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: FTQTTAGRSDELPLVHVQHWHVS*GPASKG
Trigger: GCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATG...CTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTGAGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATTGGCATGTGAGCTaGGGCCCGGCCAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGHWHVS*GPASKG
Trigger: GCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAGGCTCGGCTGGGCCTTaGCCACTGCAACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAGSAGP*PLQQGL
Trigger: GAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGCC...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000588115.5
ENST00000672786.1
ENST00000672796.1
CDS-3UTR CCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGGGCTCGGCTGGGCCTTaGCCACTGCAACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWGSAGP*PLQQGL
Trigger: GAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGCC...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000588115.5
ENST00000672786.1
ENST00000672796.1
CDS-3UTR CCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGAGCTTCCAGGTCCCGGTaGGTGCCCATGATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGASRSR*VPMISR
Trigger: CCGGCTGATCATGGGCACCCACCGGGACCTGGAAGC...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGCAAATCCGGACAGGATaGGCCCTGCTCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKQIRTG*ALLRGG
Trigger: GCCACCTCTGAGCAGGGCCCATCCTGTCCGGATTTG...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp AACCCTCCCGGCTCTTCACTCAAACCACAGCGGGCCGCTCTGATGAACTGCCTCCTCTCGGCTGGGCCTTaGCCACTGCAACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: NPPGSSLKPQRAALMNCLLSAGP*PLQQGL
Trigger: GAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGAG...GAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTGAGTGAAGAGCCGGGAGGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp CATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCAGGAGGGGAGCTGCATTaGCCCTGGGACGCTGTCGGA +
Preference number: 4 (lower is better)
Translates to: HWPWDAVGDSDVNPPGSSGGELH*PWDAVG
Trigger: TCCGACAGCGTCCCAGGGCCAATGCAGCTCCCCTCC...TGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp GGAGCTGCATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGAGACATCCAGGACGGTaGGGAGGGGAGCTGCATTGG +
Preference number: 4 (lower is better)
Translates to: GAALALGRCRRFRCEPSRRHPGR*GGELHW
Trigger: CCAATGCAGCTCCCCTCCCCACCGTCCTGGATGTCT...CCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATGCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp CCGCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCTCACACACAGCAGGCTaGAGGACGGCTCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: PPLQRGRFKCQVTERAATSHTAG*RTAHWW
Trigger: CCACCAGTGAGCCGTCCTCCAGCCTGCTGTGTGTGA...GGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTCACACACAGCAGGCTaGAGGACGGCTCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: LQRGRFKCQVTERAATQRSHTAG*RTAHWW
Trigger: CCACCAGTGAGCCGTCCTCCAGCCTGCTGTGTGTGA...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
3UTR CAA 72 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTaGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSI*EEVCGHGGWVA
Trigger: TGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAGGCTCCTTTTCTGGTTaGCGGAGGAGCCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAGSFSG*RRSRQG
Trigger: TCCCTGCCGGCTCCTCCGTCAACCAGAAAAGGAGCC...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGGAGGGTCATCAGGCTaGGAATCCCCACTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQGGSSG*ESPLPG
Trigger: GCCCGGCAGTGGGGATTCTCAGCCTGATGACCCTCC...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACCTGGCTCCTGCTTCTaGTTGACACATGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTPGSCF*LTHGPV
Trigger: CACAGGTCCATGTGTCAATCAGAAGCAGGAGCCAGG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGACCTGGCTCCTGCTTCTaGTTGACACATGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGPGSCF*LTHGPV
Trigger: CACAGGTCCATGTGTCAATCAGAAGCAGGAGCCAGG...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp TCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGAACTCGGCTTCCTCTTaGGCAGGACCTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SAERQVQVPGNREGSHPANSASS*AGPGSC
Trigger: GCAGGAGCCAGGTCCTGCTCAAGAGGAAGCCGAGTT...CGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGTCTCCATTGGCATGTaGGCTGGGGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQVSIGM*AGARPA
Trigger: TGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGAC...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGGTCTCCATTGGCATGTaGGCTGGGGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLVSIGM*AGARPA
Trigger: TGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGAC...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGCCGGAGCCCGTCGGTaGCTGACAGACGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQAGARR*LTDALN
Trigger: GTTCAGAGCGTCTGTCAGTCACCGACGGGCTCCGGC...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR TCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACCGACCACCGAGAAGTaGGGACTCCACAGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGPTTEK*GLHRPR
Trigger: TCTCGGCCTGTGGAGTCCTCACTTCTCGGTGGTCGG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR GCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGCGGGCACTGTCTGCCTaGGTTGGGTCCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKRALSA*VGSPSS
Trigger: GGAGCTGGGGGACCCAACGCAGGCAGACAGTGCCCG...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGGGCTCTGGCTGCTCTaGTCAGGGCGGGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQGLWLL*SGRALS
Trigger: AGACAGTGCCCGCCCTGAGCAGAGCAGCCAGAGCCC...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACATGTCTGTCTCAGGCTTaGTGTCATCGGCCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETCLSQA*CHRPLV
Trigger: AACAAGGGGCCGATGACAGCAAGCCTGAGACAGACA...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACTTCCCTACCCATCCTaGTGGGGGTCTGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGLPYPS*WGSAGG
Trigger: ACCCCCAGCAGACCCCCAGCAGGATGGGTAGGGAAG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGATATGGCACTGGCCTaGCCATCGGGCCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQDMALA*PSGPAT
Trigger: GGTGGCTGGGCCCGATGGGCAGGCCAGTGCCATATC...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGGATATGGCACTGGCCTaGCCATCGGGCCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLDMALA*PSGPAT
Trigger: GGTGGCTGGGCCCGATGGGCAGGCCAGTGCCATATC...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp AGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTTCGCTTGCCATCCTGCCCTaGCTCCCCACTTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RQVQVPGNREGSHPALASLAILP*LPTFSC
Trigger: ACAGGAGAAAGTGGGGAGGCAGGGCAGGATGGCAAG...CGAAGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp GAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTCTTGCCATCCTGCCCTaGCTCCCCACTTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ERQVQVPGNREGSHPALALAILP*LPTFSC
Trigger: ACAGGAGAAAGTGGGGAGGCAGGGCAGGATGGCAAG...AGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGGGGGGCTTGCCATCCTaGCCTGCCTCCCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWGGLPS*PASPLS
Trigger: AGAAAGTGGGGAGGCAGGGCAGGATGGCAAGCCCCC...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAGGGGGCTTGCCATCCTaGCCTGCCTCCCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAGGLPS*PASPLS
Trigger: AGAAAGTGGGGAGGCAGGGCAGGATGGCAAGCCCCC...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCACCTGTGTCCGGGGATaGATGACCGGAATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQRGRFKCQVTERAATQRTCVRG*MTGISS
Trigger: GCTGGAGATTCCGGTCATGCATCCCCGGACACAGGT...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp GAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTACCTGTGTCCGGGGATaGATGACCGGAATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ERQVQVPGNREGSHPALATCVRG*MTGISS
Trigger: GCTGGAGATTCCGGTCATGCATCCCCGGACACAGGT...AGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGGTGGTGTCTGGAATaGCCTGCTGAGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRARWCLE*PAEPRA
Trigger: AGCCCGGGGCTCAGCAGGGCATTCCAGACACCACCT...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCAAGGTGGTGTCTGGAATaGCCTGCTGAGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: HWPWDAVGDSDVNPPGSSRWCLE*PAEPRA
Trigger: AGCCCGGGGCTCAGCAGGGCATTCCAGACACCACCT...TGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR GCA 90 bp CAAACCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGGTTGTGCCAGGTGCCCTGGTCTaGAGAATGAGGCAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QTTAGRSDELPLVHVQVVPGALV*RMRQVV
Trigger: GACCACCTGCCTCATTCTGCAGACCAGGGCACCTGG...CACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR GCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAAGAGTCTGCCCAGGTaGCCTGGTCTGCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGKSLPR*PGLQNE
Trigger: CTCATTCTGCAGACCAGGGCACCTGGGCAGACTCTT...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCGCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCCCGAAGGAAAGAGCTaGTCAGGTGGGGCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: PPLQRGRFKCQVTERAATPEGKS*SGGASK
Trigger: CTTCGAAGCCCCACCTGAGCAGCTCTTTCCTTCGGG...GGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp CCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCTGGGCCTTGGCCACTaGAACAGGGTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: PLQRGRFKCQVTERAATQLGLGH*NRVSIG
Trigger: GCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAG...CTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp CAAACCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGGTTGTGCTGGGCCTTGGCCACTaGAACAGGGTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: QTTAGRSDELPLVHVQVVLGLGH*NRVSIG
Trigger: GCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAG...CACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR GCA 90 bp GCATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCGCCGCTCTGATGAACTaGCTCTGGTCCACGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ALALGRCRRFRCEPSRLFAALMN*LWSTCR
Trigger: CCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGC...GAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR GCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGCCGCCCCTCACACCTaGGCGCGCTCTGCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVAAPHT*ARSASF
Trigger: GAAAGAGGCAGAGCGCGCGCAGGTGTGAGGGGCGGC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR CCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGGGAGACGGCCTTTCCTaGTTCCTCCCCGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQGDGLS*FLPVLL
Trigger: CAGCAGCACGGGGAGGAACCAGGAAAGGCCGTCTCC...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGCCTCATCAGGGGAGCTaGAGACGGCCTTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKPHQGS*RRPFLV
Trigger: AACCAGGAAAGGCCGTCTCCAGCTCCCCTGATGAGG...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGTGGCATCCTGGACTCTaGGCGCTGGACTCTGCGATT +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKWHPGL*ALDSAI
Trigger: AATCGCAGAGTCCAGCGCCCAGAGTCCAGGATGCCA...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGGTCCCCCAGCTCCGTaGCCTCCTGGAGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFGPPAP*PPGGGP
Trigger: GGGTCCCCCTCCAGGAGGCCACGGAGCTGGGGGACC...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACCCCGTCCCCCTGTCTaGAGGGTCATCAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGPRPPV*RVIRLR
Trigger: TCTCAGCCTGATGACCCTCCAGACAGGGGGACGGGG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGAGCGAGGTGCAGCCTaGCAAGGCCCTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKERGAA*QGPPVA
Trigger: GGCCACAGGAGGGCCTTGCCAGGCTGCACCTCGCTC...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCACTCCAGCACCCATCATaGACTCTCCGCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: ASAERQVQVPGNREGSHPLQHPS*TLRSQV
Trigger: CACCTGGGAGCGGAGAGTCCATGATGGGTGCTGGAG...TGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCCTTCTGATTGACACATaGACCTGTGTCCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGLLIDT*TCVRGC
Trigger: GCATCCCCGGACACAGGTCCATGTGTCAATCAGAAG...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACTCTTGAGCAGGACCTaGCTCCTGCTTCTGATTGAC +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETLLSRT*LLLLID
Trigger: GTCAATCAGAAGCAGGAGCCAGGTCCTGCTCAAGAG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGCTGCCAGCTCTGAGGTaGTGTCTGGAATGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKLPALR*CLECPA
Trigger: AGCAGGGCATTCCAGACACCACCTCAGAGCTGGCAG...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTCTGCCAGCTCTGAGGTaGTGTCTGGAATGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: ERQVQVPGNREGSHPALALPALR*CLECPA
Trigger: AGCAGGGCATTCCAGACACCACCTCAGAGCTGGCAG...AGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCCTGCCAGCTCTGAGGTaGTGTCTGGAATGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LQRGRFKCQVTERAATQRLPALR*CLECPA
Trigger: AGCAGGGCATTCCAGACACCACCTCAGAGCTGGCAG...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp GGAGCTGCATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTGCCAGCTCTGAGGTaGTGTCTGGAATGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GAALALGRCRRFRCEPSRLPALR*CLECPA
Trigger: AGCAGGGCATTCCAGACACCACCTCAGAGCTGGCAG...CCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATGCAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAAGGGCATCCTGTATCTaGCTGTCCAGCAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTRASCI*LSSRKS
Trigger: CGACTTCCTGCTGGACAGCCAGATACAGGATGCCCT...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAGGGCATCCTGTATCTaGCTGTCCAGCAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGRASCI*LSSRKS
Trigger: CGACTTCCTGCTGGACAGCCAGATACAGGATGCCCT...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp ATCCAGGACGGTGGGGAGGGGAGCTGCATTGGCCCTGGGACGCTGTCGGAGATTAAAGAGCTGCTCAGGTaGGGCTTCGAAGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: IQDGGEGSCIGPGTLSEIKELLR*GFEVRG
Trigger: GCCTCTGACTTCGAAGCCCCACCTGAGCAGCTCTTT...AATCTCCGACAGCGTCCCAGGGCCAATGCAGCTCCCCTCCCCACCGTCCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGCATTGGCATGTGAGCTaGGGCCCGGCCAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLHWHVS*GPASKG
Trigger: GCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATG...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACATTGGCATGTGAGCTaGGGCCCGGCCAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQHWHVS*GPASKG
Trigger: GCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATG...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp TTCAGATGTGAACCCTCCCGGCTCTTCACTCAAACCACAGCGGGCCGCTCTGATCATTGGCATGTGAGCTaGGGCCCGGCCAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: FRCEPSRLFTQTTAGRSDHWHVS*GPASKG
Trigger: GCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATG...ATCAGAGCGGCCCGCTGTGGTTTGAGTGAAGAGCCGGGAGGGTTCACATCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGATCAGCCGGCTCGGCTaGGCCTTGGCCACTGCAACA +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQISRLG*ALATAT
Trigger: TGTTGCAGTGGCCAAGGCCCAGCCGAGCCGGCTGAT...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000588115.5
ENST00000672786.1
ENST00000672796.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGCTTCCAGGTCCCGGTaGGTGCCCATGATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQASRSR*VPMISR
Trigger: CCGGCTGATCATGGGCACCCACCGGGACCTGGAAGC...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAGACATGGGGGCTGGGTaGCAAAGGAAACACAGACCT +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGDMGAG*QRKHRP
Trigger: AGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTC...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAGACATGGGGGCTGGGTaGCAAAGGAAACACAGACCT +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTDMGAG*QRKHRP
Trigger: AGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTC...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAGGAGGTCTGCGGACATaGGGGCTGGGTGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAGGLRT*GLGGKG
Trigger: TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCC...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGTCCACTAGGACCCCCTaGAGCATCTTGGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKSTRTP*SILEEV
Trigger: GACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGA...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGGTGGCCAGCTTCCTaGAGCCCAGGCCCGCTTGAA +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRARWPAS*SPGPLE
Trigger: TTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCACCT...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCAGGACGGTGGGGAGGGGAGCTGCATTGGCCCTGGGACGCTGTCGGAGATTCACTGATGAACTGCCTCTaGTCCACGTGCAGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: PGRWGGELHWPWDAVGDSLMNCL*STCRLC
Trigger: ACACAACCTGCACGTGGACCAGAGGCAGTTCATCAG...TGAATCTCCGACAGCGTCCCAGGGCCAATGCAGCTCCCCTCCCCACCGTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGAGGCCACGCACGACGTTaGTGGCATCCTCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGGHARR*WHPPSW
Trigger: CCAGGATGGAGGATGCCACCAACGTCGTGCGTGGCC...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
3UTR CAA 72 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTaGTGTTGTCCATGGAAGACCAACTTCCGGGCAACT +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPP*CCPWKTNFRAT
Trigger: AGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAAACAAACCTCCCGAATaGGTTCTGGGAAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETNKPPE*VLGRRK
Trigger: CTTCCTCCTTCCCAGAACTCATTCGGGAGGTTTGTT...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAACAAACCTCCCGAATaGGTTCTGGGAAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRNKPPE*VLGRRK
Trigger: CTTCCTCCTTCCCAGAACTCATTCGGGAGGTTTGTT...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCGCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCCTGGCTCCTGCTTCTaGTTGACACATGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: PPLQRGRFKCQVTERAATPGSCF*LTHGPV
Trigger: CACAGGTCCATGTGTCAATCAGAAGCAGGAGCCAGG...GGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGAACTCGGCTTCCTCTTaGGCAGGACCTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQNSASS*AGPGSC
Trigger: GCAGGAGCCAGGTCCTGCTCAAGAGGAAGCCGAGTT...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp GGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACTCAAACCACATCTGGAATGCCCTGCTaGGCCCCGGGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GRCRRFRCEPSRLFTQTTSGMPC*APGSWR
Trigger: TCTCCAGGAGCCCGGGGCTCAGCAGGGCATTCCAGA...TGTGGTTTGAGTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR TCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGTCTGGAATGCCCTGCTaGGCCCCGGGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKSGMPC*APGSWR
Trigger: TCTCCAGGAGCCCGGGGCTCAGCAGGGCATTCCAGA...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp TGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACTCAAACCATCTGGAATGCCCTGCTaGGCCCCGGGCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: WDAVGDSDVNPPGSSLKPSGMPC*APGSWR
Trigger: TCTCCAGGAGCCCGGGGCTCAGCAGGGCATTCCAGA...TGGTTTGAGTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR TCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGCACAGTTTCCCTCCCTaGAGCCAAGGGTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKHSFPP*SQGWQM
Trigger: CATTTGCCACCCTTGGCTTCAGGGAGGGAAACTGTG...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAGGCCGAGAGCCCACGTaGAGCCGGAGCCCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVGREPT*SRSPSV
Trigger: CACCGACGGGCTCCGGCTTCACGTGGGCTCTCGGCC...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR TCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCATGGAGAGCTCAACGATaGGGCCACGCACGACGTTGG +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAWRAQR*GHARRW
Trigger: CCAACGTCGTGCGTGGCCTCATCGTTGAGCTCTCCA...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR GCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGCTGAGAATCCCCACTaGCGGGCACCGCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVAENPH*RAPPAQ
Trigger: CTGTGCAGGCGGTGCCCGGCAGTGGGGATTCTCAGC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGATGTCTGTCTCAGGCTTaGTGTCATCGGCCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGCLSQA*CHRPLV
Trigger: AACAAGGGGCCGATGACAGCAAGCCTGAGACAGACA...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTAGGAGCATCCCAGGCTaGTATGAGTCCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: ERQVQVPGNREGSHPALARSIPG*YESLPL
Trigger: AAGGGGAAGGGACTCATAGCAGCCTGGGATGCTCCT...AGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCAGGAGCATCCCAGGCTaGTATGAGTCCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LQRGRFKCQVTERAATQRRSIPG*YESLPL
Trigger: AAGGGGAAGGGACTCATAGCAGCCTGGGATGCTCCT...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp CCGCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCGTCTGTGCTCAGGTCTaGGATGACAACCATCCCGAG +
Preference number: 4 (lower is better)
Translates to: PPLQRGRFKCQVTERAATVCAQV*DDNHPE
Trigger: CTCGGGATGGTTGTCATCGCAGACCTGAGCACAGAC...GGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGATATGGCACTGGCCTaGCCATCGGGCCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKDMALA*PSGPAT
Trigger: GGTGGCTGGGCCCGATGGGCAGGCCAGTGCCATATC...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGGGGGCTTGCCATCCTaGCCTGCCTCCCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQGGLPS*PASPLS
Trigger: AGAAAGTGGGGAGGCAGGGCAGGATGGCAAGCCCCC...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGAGCACAACAGAGGCTTaGGGGGACACACGGAACCCC +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWSTTEA*GDTRNP
Trigger: GGGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCT...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCCTGGAGAGGGTCGTCTaGTATTTCTCTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGLERVV*YFSVFQ
Trigger: CTGGAACACAGAGAAATAGCAGACGACCCTCTCCAG...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACCAGGTGCCCTGGTCTaGAGAATGAGGCAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: HWPWDAVGDSDVNPPGSSPGALV*RMRQVV
Trigger: GACCACCTGCCTCATTCTGCAGACCAGGGCACCTGG...TGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR GCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGAAGAGTCTGCCCAGGTaGCCTGGTCTGCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKKSLPR*PGLQNE
Trigger: CTCATTCTGCAGACCAGGGCACCTGGGCAGACTCTT...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp AGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTTCGAAGAGTCTGCCCAGGTaGCCTGGTCTGCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: RQVQVPGNREGSHPALASKSLPR*PGLQNE
Trigger: CTCATTCTGCAGACCAGGGCACCTGGGCAGACTCTT...CGAAGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp TCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCCCGAAGGAAAGAGCTaGTCAGGTGGGGCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: SAERQVQVPGNREGSHPAPEGKS*SGGASK
Trigger: CTTCGAAGCCCCACCTGAGCAGCTCTTTCCTTCGGG...CGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACTGGGCCTTGGCCACTaGAACAGGGTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGLGLGH*NRVSIG
Trigger: GCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR GCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGCTGGGCCTTGGCCACTaGAACAGGGTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQLGLGH*NRVSIG
Trigger: GCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAG...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAGTCTCCACTAGCAGCTaGCATCCTGGACTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAVSTSS*HPGLWA
Trigger: CGCCCAGAGTCCAGGATGCCAGCTGCTAGTGGAGAC...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGAGTCTCCACTAGCAGCTaGCATCCTGGACTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGVSTSS*HPGLWA
Trigger: CGCCCAGAGTCCAGGATGCCAGCTGCTAGTGGAGAC...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACCCCGTCCCCCTGTCTaGAGGGTCATCAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQPRPPV*RVIRLR
Trigger: TCTCAGCCTGATGACCCTCCAGACAGGGGGACGGGG...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGCCCTACCCATCCTGCTaGGGGTCTGCTGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKPYPSC*GSAGGQ
Trigger: CTGACCCCCAGCAGACCCCCAGCAGGATGGGTAGGG...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTCTCTTCCAGCTCAGTaGGGTCTGTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LQRGRFKCQVTERAATQRSLPAQ*GLCSGL
Trigger: CAGACCTGAGCACAGACCCCACTGAGCTGGAAGAGA...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp AGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTTCGTCTCTTCCAGCTCAGTaGGGTCTGTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RQVQVPGNREGSHPALASSLPAQ*GLCSGL
Trigger: CAGACCTGAGCACAGACCCCACTGAGCTGGAAGAGA...CGAAGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACAGGTGATATGGCACTaGCCTGCCCATCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQQVIWH*PAHRAQ
Trigger: CTGGGCCCGATGGGCAGGCCAGTGCCATATCACCTG...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGCTCCAGCACCCATCATaGACTCTCCGCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQLQHPS*TLRSQV
Trigger: CACCTGGGAGCGGAGAGTCCATGATGGGTGCTGGAG...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCGCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCAAAGAGCTGCTCAGGTaGGGCTTCGAAGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PPLQRGRFKCQVTERAATKELLR*GFEVRG
Trigger: GCCTCTGACTTCGAAGCCCCACCTGAGCAGCTCTTT...GGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp GAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTAAAGAGCTGCTCAGGTaGGGCTTCGAAGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ERQVQVPGNREGSHPALAKELLR*GFEVRG
Trigger: GCCTCTGACTTCGAAGCCCCACCTGAGCAGCTCTTT...AGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGCATTGGCATGTGAGCTaGGGCCCGGCCAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVHWHVS*GPASKG
Trigger: GCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATG...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAATCAGCCGGCTCGGCTaGGCCTTGGCCACTGCAACA +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQISRLG*ALATAT
Trigger: TGTTGCAGTGGCCAAGGCCCAGCCGAGCCGGCTGAT...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000588115.5
ENST00000672786.1
ENST00000672796.1
CDS-3UTR CCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGGGAGGTCTGCGGACATaGGGGCTGGGTGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLGGLRT*GLGGKG
Trigger: TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCC...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGGAGGTCTGCGGACATaGGGGCTGGGTGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQGGLRT*GLGGKG
Trigger: TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCC...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCACCCCCTGGAGCATCTTaGAGGAGGTCTGCGGACATG +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAPPGAS*RRSADM
Trigger: CATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGCCTTTGTGTTGTCCATaGAAGACCAACTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: PPGASWRRSADMGAGWQRPLCCP*KTNFRA
Trigger: TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACCCTTTGTGTTGTCCATaGAAGACCAACTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDPLCCP*KTNFRA
Trigger: TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAAGGTGGCCAGCTTCCTaGAGCCCAGGCCCGCTTGAA +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQRWPAS*SPGPLE
Trigger: TTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCACCT...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACAAATCCGGACAGGATaGGCCCTGCTCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGQIRTG*ALLRGG
Trigger: GCCACCTCTGAGCAGGGCCCATCCTGTCCGGATTTG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGCAAATCCGGACAGGATaGGCCCTGCTCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQQIRTG*ALLRGG
Trigger: GCCACCTCTGAGCAGGGCCCATCCTGTCCGGATTTG...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCACAAATCCGGACAGGATaGGCCCTGCTCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAQIRTG*ALLRGG
Trigger: GCCACCTCTGAGCAGGGCCCATCCTGTCCGGATTTG...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACTCAAACCACAAGCCGCCCTCTCGGCTaGGCCTTGGCCACTGCAACA +
Preference number: 4 (lower is better)
Translates to: GRCRRFRCEPSRLFTQTTSRPLG*ALATAT
Trigger: TGTTGCAGTGGCCAAGGCCCAGCCGAGAGGGCGGCT...TGTGGTTTGAGTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp GGAGCTGCATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGTGCAGGTTGTGTGTGTaGCTAAGGGAGGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GAALALGRCRRFRCEPSRCRLCV*LREVAS
Trigger: ACTGGCCACCTCCCTTAGCCACACACACAACCTGCA...CCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATGCAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp CGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACTCAAACCACAGCGGGCCGCGAGCTGCATTGGCCCTaGGACGCTGTCGGAGATTCA +
Preference number: 4 (lower is better)
Translates to: RRFRCEPSRLFTQTTAGRELHWP*DAVGDS
Trigger: TGAATCTCCGACAGCGTCCCAGGGCCAATGCAGCTC...GCGGCCCGCTGTGGTTTGAGTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp CAAACCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGGTTGTGGAGCTGCATTGGCCCTaGGACGCTGTCGGAGATTCA +
Preference number: 4 (lower is better)
Translates to: QTTAGRSDELPLVHVQVVELHWP*DAVGDS
Trigger: TGAATCTCCGACAGCGTCCCAGGGCCAATGCAGCTC...CACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp TTCACTCAAACCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGAGACATCCAGGACGGTaGGGAGGGGAGCTGCATTGG +
Preference number: 4 (lower is better)
Translates to: FTQTTAGRSDELPLVHVQRHPGR*GGELHW
Trigger: CCAATGCAGCTCCCCTCCCCACCGTCCTGGATGTCT...CTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTGAGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGTCCTCGGCTGGGCCTTaGCCACTGCAACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLSSAGP*PLQQGL
Trigger: GAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGGA...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGACGAAGGTCCTCGGCTaGGCCTTGGCCACTGCAACA +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWTKVLG*ALATAT
Trigger: TGTTGCAGTGGCCAAGGCCCAGCCGAGGACCTTCGT...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACACGCACGACGTTGGTaGCATCCTCCATCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGHARRW*HPPSWR
Trigger: CCTCCAGGATGGAGGATGCCACCAACGTCGTGCGTG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGTCTGGCTCCTCAGGGTaGTGTAAACAGCCCAACATG +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKSGSSG*CKQPNM
Trigger: CATGTTGGGCTGTTTACATCACCCTGAGGAGCCAGA...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR TCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGGCTCCTTTTCTGGTTaGCGGAGGAGCCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVGSFSG*RRSRQG
Trigger: TCCCTGCCGGCTCCTCCGTCAACCAGAAAAGGAGCC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGCTGTGGTTTCCCCAGTaGGCGAGGTGCAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKLWFPQ*ARCSLA
Trigger: TGCCAGGCTGCACCTCGCTCACTGGGGAAACCACAG...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGGCTCCTGCTTCTGATTaGCACATGGACCTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: PLQRGRFKCQVTERAATQAPASD*HMDLCP
Trigger: CGGACACAGGTCCATGTGTCAATCAGAAGCAGGAGC...CTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp GCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCTCCTGCTTCTGATTaGCACATGGACCTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: ASAERQVQVPGNREGSHPAPASD*HMDLCP
Trigger: CGGACACAGGTCCATGTGTCAATCAGAAGCAGGAGC...TGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp GCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCACCTGGCTCCTGCTTCTaGTTGACACATGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: ASAERQVQVPGNREGSHPPGSCF*LTHGPV
Trigger: CACAGGTCCATGTGTCAATCAGAAGCAGGAGCCAGG...TGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR TCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAACTCGGCTTCCTCTTaGGCAGGACCTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLNSASS*AGPGSC
Trigger: GCAGGAGCCAGGTCCTGCTCAAGAGGAAGCCGAGTT...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp GCATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCTCGGAGATTCAGATGTaGACCCTCCCGGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: ALALGRCRRFRCEPSRLFSEIQM*TLPALH
Trigger: GTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGA...GAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR TCA 90 bp ACCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGGTTGTGTGTTCGGAGATTCAGATGTaGACCCTCCCGGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: TTAGRSDELPLVHVQVVCSEIQM*TLPALH
Trigger: GTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGA...ACACACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR TCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGCCGACCACCGAGAAGTaGGGACTCCACAGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKPTTEK*GLHRPR
Trigger: TCTCGGCCTGTGGAGTCCTCACTTCTCGGTGGTCGG...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR TCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACCTCGAGTCCGGAGGTaGAAGATGGAAAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGPRVRR*KMERPE
Trigger: CTCAGGCCTTTCCATCTTTCACCTCCGGACTCGAGG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR TCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGTGGAGAGCTCAACGATaGGGCCACGCACGACGTTGG +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLWRAQR*GHARRW
Trigger: CCAACGTCGTGCGTGGCCTCATCGTTGAGCTCTCCA...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGCACAGGGCTCTGGCTaGTCTGCTCAGGGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFAQGSG*SAQGGH
Trigger: GTGCCCGCCCTGAGCAGAGCAGCCAGAGCCCTGTGC...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGTCTGTGCTCAGGTCTaGGATGACAACCATCCCGAG +
Preference number: 4 (lower is better)
Translates to: ASAERQVQVPGNREGSHPVCAQV*DDNHPE
Trigger: CTCGGGATGGTTGTCATCGCAGACCTGAGCACAGAC...TGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTGTGTCCGGGGATaGATGACCGGAATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQTCVRG*MTGISS
Trigger: GCTGGAGATTCCGGTCATGCATCCCCGGACACAGGT...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACCTGTGTCCGGGGATaGATGACCGGAATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRATCVRG*MTGISS
Trigger: GCTGGAGATTCCGGTCATGCATCCCCGGACACAGGT...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGCCAGGTGCCCTGGTCTaGAGAATGAGGCAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLPGALV*RMRQVV
Trigger: GACCACCTGCCTCATTCTGCAGACCAGGGCACCTGG...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAAAGAGTCTGCCCAGGTaGCCTGGTCTGCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: ASAERQVQVPGNREGSHPKSLPR*PGLQNE
Trigger: CTCATTCTGCAGACCAGGGCACCTGGGCAGACTCTT...TGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp GCATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCAAGAGTCTGCCCAGGTaGCCTGGTCTGCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: ALALGRCRRFRCEPSRLFKSLPR*PGLQNE
Trigger: CTCATTCTGCAGACCAGGGCACCTGGGCAGACTCTT...GAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR GCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGCCCGAAGGAAAGAGCTaGTCAGGTGGGGCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWPEGKS*SGGASK
Trigger: CTTCGAAGCCCCACCTGAGCAGCTCTTTCCTTCGGG...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACCCGAAGGAAAGAGCTaGTCAGGTGGGGCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: HWPWDAVGDSDVNPPGSSPEGKS*SGGASK
Trigger: CTTCGAAGCCCCACCTGAGCAGCTCTTTCCTTCGGG...TGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR GCA 90 bp TTCAGATGTGAACCCTCCCGGCTCTTCACTCAAACCACAGCGGGCCGCTCTGATCTGGGCCTTGGCCACTaGAACAGGGTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: FRCEPSRLFTQTTAGRSDLGLGH*NRVSIG
Trigger: GCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAG...ATCAGAGCGGCCCGCTGTGGTTTGAGTGAAGAGCCGGGAGGGTTCACATCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR GCA 90 bp GCATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCTGCCTCTGGTCCACGTaGAGGTTGTGTGTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: ALALGRCRRFRCEPSRLFCLWST*RLCVWL
Trigger: TAGCCACACACACAACCTGCACGTGGACCAGAGGCA...GAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGCTGGCTCCTTTTCTaGTTGACGGAGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRASWLLF*LTEEPA
Trigger: TGCCGGCTCCTCCGTCAACCAGAAAAGGAGCCAGCT...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGAGCTGGCTCCTTTTCTaGTTGACGGAGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQSWLLF*LTEEPA
Trigger: TGCCGGCTCCTCCGTCAACCAGAAAAGGAGCCAGCT...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGTGGCATCCTGGACTCTaGGCGCTGGACTCTGCGATT +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWWHPGL*ALDSAI
Trigger: AATCGCAGAGTCCAGCGCCCAGAGTCCAGGATGCCA...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAACAGGTGGTCTTGGCTaGCCCTCTGTGAGGCGGACA +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQTGGLG*PSVRRT
Trigger: TGTCCGCCTCACAGAGGGCCAGCCAAGACCACCTGT...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGTCTGACAGGTGGTCTTaGCTGGCCCTCTGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLSDRWS*LALCEA
Trigger: CGCCTCACAGAGGGCCAGCCAAGACCACCTGTCAGA...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGATTGGCCACCGTCACCTaGAACCCTGTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGLATVT*NPVCLR
Trigger: CCTGAGACAGACAGGGTTCCAGGTGACGGTGGCCAA...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTATGGGCCCCTCCCTCCTaGGGGGCTCCTCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVWAPPS*GAPLSG
Trigger: GCCAGACAGAGGAGCCCCCCAGGAGGGAGGGGCCCA...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGCTCCAGCACCCATCATaGACTCTCCGCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLLQHPS*TLRSQV
Trigger: CACCTGGGAGCGGAGAGTCCATGATGGGTGCTGGAG...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCCTCTTGAGCAGGACCTaGCTCCTGCTTCTGATTGAC +
Preference number: 4 (lower is better)
Translates to: LQRGRFKCQVTERAATQRLLSRT*LLLLID
Trigger: GTCAATCAGAAGCAGGAGCCAGGTCCTGCTCAAGAG...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp TTCACTCAAACCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGCTGCCAGCTCTGAGGTaGTGTCTGGAATGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: FTQTTAGRSDELPLVHVQLPALR*CLECPA
Trigger: AGCAGGGCATTCCAGACACCACCTCAGAGCTGGCAG...CTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTGAGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp TCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGAGGGCATCCTGTATCTaGCTGTCCAGCAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: SAERQVQVPGNREGSHPARASCI*LSSRKS
Trigger: CGACTTCCTGCTGGACAGCCAGATACAGGATGCCCT...CGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp CCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGAGGGCATCCTGTATCTaGCTGTCCAGCAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: PLQRGRFKCQVTERAATQRASCI*LSSRKS
Trigger: CGACTTCCTGCTGGACAGCCAGATACAGGATGCCCT...CTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACACAGACCTCAAAGTaGCCTACAACTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKTQTSK*PTTPSR
Trigger: CCTGGAGGGAGTTGTAGGCCACTTTGAGGTCTGTGT...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGTGCGGACATGGGGGCTaGGTGGCAAAGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQCGHGG*VAKETQ
Trigger: CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCA...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCATGCGGACATGGGGGCTaGGTGGCAAAGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRACGHGG*VAKETQ
Trigger: CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCA...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp ACCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGGTTGTGTGTTGCAGGTTGTGTGTGTaGCTAAGGGAGGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: TTAGRSDELPLVHVQVVCCRLCV*LREVAS
Trigger: ACTGGCCACCTCCCTTAGCCACACACACAACCTGCA...ACACACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGAGGCCTCAGAGGCCTaGATCCCCACGAAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKEASEA*IPTKVL
Trigger: GAGGACCTTCGTGGGGATCCAGGCCTCTGAGGCCTC...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGAGGCCTCAGAGGCCTaGATCCCCACGAAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVEASEA*IPTKVL
Trigger: GAGGACCTTCGTGGGGATCCAGGCCTCTGAGGCCTC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGGCCACGCACGACGTTaGTGGCATCCTCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVGHARR*WHPPSW
Trigger: CCAGGATGGAGGATGCCACCAACGTCGTGCGTGGCC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGAACAAACCTCCCGAATaGGTTCTGGGAAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKNKPPE*VLGRRK
Trigger: CTTCCTCCTTCCCAGAACTCATTCGGGAGGTTTGTT...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR TCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGGCTCCTGCTTCTGATTaGCACATGGACCTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQAPASD*HMDLCP
Trigger: CGGACACAGGTCCATGTGTCAATCAGAAGCAGGAGC...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGGCTCCTGCTTCTGATTaGCACATGGACCTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWAPASD*HMDLCP
Trigger: CGGACACAGGTCCATGTGTCAATCAGAAGCAGGAGC...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTCTCCATTGGCATGTaGGCTGGGGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFVSIGM*AGARPA
Trigger: TGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGAC...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGCAACTTCCGGGCAACTaGAGGGAGGTTTGTAGGGTC +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWQLPGN*REVCRV
Trigger: GACCCTACAAACCTCCCTTCAGTTGCCCGGAAGTTG...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGCACAGTTTCCCTCCCTaGAGCCAAGGGTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQHSFPP*SQGWQM
Trigger: CATTTGCCACCCTTGGCTTCAGGGAGGGAAACTGTG...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACACAGTTTCCCTCCCTaGAGCCAAGGGTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGHSFPP*SQGWQM
Trigger: CATTTGCCACCCTTGGCTTCAGGGAGGGAAACTGTG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR GCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGGAACAGGTCCCAATTTaGCCTCTGGCTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWEQVPI*PLAPQG
Trigger: ACCCTGAGGAGCCAGAGGGCAAATTGGGACCTGTTC...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGGAACAGGTCCCAATTTaGCCTCTGGCTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQEQVPI*PLAPQG
Trigger: ACCCTGAGGAGCCAGAGGGCAAATTGGGACCTGTTC...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGGGTTCCTCCCCGTGCTaGTGTGTAGAGGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLGSSPC*CVEGTG
Trigger: ACCTGTTCCCTCTACACAGCAGCACGGGGAGGAACC...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAAGGGCGGGCACTGTCTaGCTGCGTTGGGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVRAGTV*LRWVPQ
Trigger: CTGGGGGACCCAACGCAGGCAGACAGTGCCCGCCCT...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAAGGCAGGCCAGCCCCTaGTGTCCTTTGGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVRQASP*CPLGPS
Trigger: GGAGGGGCCCAAAGGACAGCAGGGGCTGGCCTGCCT...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGAAGGAGCATCCCAGGCTaGTATGAGTCCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGRSIPG*YESLPL
Trigger: AAGGGGAAGGGACTCATAGCAGCCTGGGATGCTCCT...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGGTCTGTGCTCAGGTCTaGGATGACAACCATCCCGAG +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWVCAQV*DDNHPE
Trigger: CTCGGGATGGTTGTCATCGCAGACCTGAGCACAGAC...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCCTGGAGAGGGTCGTCTaGTATTTCTCTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LQRGRFKCQVTERAATQRLERVV*YFSVFQ
Trigger: CTGGAACACAGAGAAATAGCAGACGACCCTCTCCAG...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGCTGGAGAGGGTCGTCTaGTATTTCTCTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKLERVV*YFSVFQ
Trigger: CTGGAACACAGAGAAATAGCAGACGACCCTCTCCAG...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp AGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTTCGCTGGAGAGGGTCGTCTaGTATTTCTCTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RQVQVPGNREGSHPALASLERVV*YFSVFQ
Trigger: CTGGAACACAGAGAAATAGCAGACGACCCTCTCCAG...CGAAGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGAAAGAGTCTGCCCAGGTaGCCTGGTCTGCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGKSLPR*PGLQNE
Trigger: CTCATTCTGCAGACCAGGGCACCTGGGCAGACTCTT...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp AGATTCAGATGTGAACCCTCCCGGCTCTTCACTCAAACCACAGCGGGCCGCTCTCCCGAAGGAAAGAGCTaGTCAGGTGGGGCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: RFRCEPSRLFTQTTAGRSPEGKS*SGGASK
Trigger: CTTCGAAGCCCCACCTGAGCAGCTCTTTCCTTCGGG...AGAGCGGCCCGCTGTGGTTTGAGTGAAGAGCCGGGAGGGTTCACATCTGAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR GCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGCTGGGCCTTGGCCACTaGAACAGGGTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVLGLGH*NRVSIG
Trigger: GCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAG...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGCTGGGCCTTGGCCACTaGAACAGGGTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKLGLGH*NRVSIG
Trigger: GCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAG...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAGCCGCCCCTCACACCTaGGCGCGCTCTGCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVAAPHT*ARSASF
Trigger: GAAAGAGGCAGAGCGCGCGCAGGTGTGAGGGGCGGC...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR GCA 90 bp GCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAAGAGGCAGGTTCAAGTaGCAGGTAACAGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ASAERQVQVPGNREGSHPRGRFK*QVTERA
Trigger: TGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCT...TGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR GCA 90 bp TCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGAGAGGCAGGTTCAAGTaGCAGGTAACAGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SAERQVQVPGNREGSHPARGRFK*QVTERA
Trigger: TGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCT...CGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACCTCATCAGGGGAGCTaGAGACGGCCTTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQPHQGS*RRPFLV
Trigger: AACCAGGAAAGGCCGTCTCCAGCTCCCCTGATGAGG...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAAGCTGGCTCCTTTTCTaGTTGACGGAGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQSWLLF*LTEEPA
Trigger: TGCCGGCTCCTCCGTCAACCAGAAAAGGAGCCAGCT...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGCTCCCGAATGAGTTCTaGGAAGGAGGAAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQLPNEF*EGGRGA
Trigger: AGCTCCCCTTCCTCCTTCCCAGAACTCATTCGGGAG...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACTCCCGAATGAGTTCTaGGAAGGAGGAAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGLPNEF*EGGRGA
Trigger: AGCTCCCCTTCCTCCTTCCCAGAACTCATTCGGGAG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGCTCCCGAATGAGTTCTaGGAAGGAGGAAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWLPNEF*EGGRGA
Trigger: AGCTCCCCTTCCTCCTTCCCAGAACTCATTCGGGAG...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCCTGGATTTTGCAAACTaGGGAACAAACCTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGLDFAN*GTNLPN
Trigger: ATTCGGGAGGTTTGTTCCCCAGTTTGCAAAATCCAG...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACTGGATTTTGCAAACTaGGGAACAAACCTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETLDFAN*GTNLPN
Trigger: ATTCGGGAGGTTTGTTCCCCAGTTTGCAAAATCCAG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACTGGACTCTGGGCGCTaGACTCTGCGATTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGLDSGR*TLRLFP
Trigger: TGGAAACAATCGCAGAGTCCAGCGCCCAGAGTCCAG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAATGGCATCCTGGACTCTaGGCGCTGGACTCTGCGATT +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQWHPGL*ALDSAI
Trigger: AATCGCAGAGTCCAGCGCCCAGAGTCCAGGATGCCA...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGACAGGTGGTCTTGGCTaGCCCTCTGTGAGGCGGACA +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKTGGLG*PSVRRT
Trigger: TGTCCGCCTCACAGAGGGCCAGCCAAGACCACCTGT...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGTCTGACAGGTGGTCTTaGCTGGCCCTCTGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKSDRWS*LALCEA
Trigger: CGCCTCACAGAGGGCCAGCCAAGACCACCTGTCAGA...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCACCTTGTTCTGACAGGTaGTCTTGGCTGGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAPCSDR*SWLALC
Trigger: ACAGAGGGCCAGCCAAGACCACCTGTCAGAACAAGG...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGGGTAGGTGTTCCTTTTaGCCACCGTCACCTGGAACC +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWGRCSF*PPSPGT
Trigger: GGTTCCAGGTGACGGTGGCCAAAAGGAACACCTACC...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTCCCTACCCATCCTGCTaGGGGTCTGCTGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFPYPSC*GSAGGQ
Trigger: CTGACCCCCAGCAGACCCCCAGCAGGATGGGTAGGG...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGATCTCTTCCAGCTCAGTaGGGTCTGTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGSLPAQ*GLCSGL
Trigger: CAGACCTGAGCACAGACCCCACTGAGCTGGAAGAGA...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCTTCTGATTGACACATaGACCTGTGTCCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: PLQRGRFKCQVTERAATQLLIDT*TCVRGC
Trigger: GCATCCCCGGACACAGGTCCATGTGTCAATCAGAAG...CTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp TCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTTCTGATTGACACATaGACCTGTGTCCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: SAERQVQVPGNREGSHPALLIDT*TCVRGC
Trigger: GCATCCCCGGACACAGGTCCATGTGTCAATCAGAAG...CGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp GCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCACTCTTGAGCAGGACCTaGCTCCTGCTTCTGATTGAC +
Preference number: 4 (lower is better)
Translates to: ASAERQVQVPGNREGSHPLLSRT*LLLLID
Trigger: GTCAATCAGAAGCAGGAGCCAGGTCCTGCTCAAGAG...TGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAAAGAGCTGCTCAGGTaGGGCTTCGAAGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAKELLR*GFEVRG
Trigger: GCCTCTGACTTCGAAGCCCCACCTGAGCAGCTCTTT...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGAAAGAGCTGCTCAGGTaGGGCTTCGAAGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQKELLR*GFEVRG
Trigger: GCCTCTGACTTCGAAGCCCCACCTGAGCAGCTCTTT...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCAAAAGAGCTGCTCAGGTaGGGCTTCGAAGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HWPWDAVGDSDVNPPGSSKELLR*GFEVRG
Trigger: GCCTCTGACTTCGAAGCCCCACCTGAGCAGCTCTTT...TGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGGACATGGGGGCTGGGTaGCAAAGGAAACACAGACCT +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWDMGAG*QRKHRP
Trigger: AGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTC...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAATGCGGACATGGGGGCTaGGTGGCAAAGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQCGHGG*VAKETQ
Trigger: CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCA...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGCCCCCTGGAGCATCTTaGAGGAGGTCTGCGGACATG +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVPPGAS*RRSADM
Trigger: CATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGCCTTTGTGTTGTCCATaGAAGACCAACTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKPLCCP*KTNFRA
Trigger: TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGCAAATCCGGACAGGATaGGCCCTGCTCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVQIRTG*ALLRGG
Trigger: GCCACCTCTGAGCAGGGCCCATCCTGTCCGGATTTG...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp TTCACTCAAACCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGAAGGGAGGTGGCCAGTaGCACAGCAGGTACAAGTCA +
Preference number: 4 (lower is better)
Translates to: FTQTTAGRSDELPLVHVQKGGGQ*HSRYKS
Trigger: TGACTTGTACCTGCTGTGCCACTGGCCACCTCCCTT...CTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTGAGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp TTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACTAAGGGAGGTGGCCAGTaGCACAGCAGGTACAAGTCA +
Preference number: 4 (lower is better)
Translates to: LALGRCRRFRCEPSRLFTKGGGQ*HSRYKS
Trigger: TGACTTGTACCTGCTGTGCCACTGGCCACCTCCCTT...AGTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp AACCCTCCCGGCTCTTCACTCAAACCACAGCGGGCCGCTCTGATGAACTGCCTCCTGATGAACTGCCTCTaGTCCACGTGCAGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: NPPGSSLKPQRAALMNCLLMNCL*STCRLC
Trigger: ACACAACCTGCACGTGGACCAGAGGCAGTTCATCAG...GAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTGAGTGAAGAGCCGGGAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAATCCGGAGGTGAAAGATaGAAAGGCCTGAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQSGGER*KGLRVG
Trigger: GCCCACCCTCAGGCCTTTCCATCTTTCACCTCCGGA...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR CCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGACGAAGGTCCTCGGCTaGGCCTTGGCCACTGCAACA +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVTKVLG*ALATAT
Trigger: TGTTGCAGTGGCCAAGGCCCAGCCGAGGACCTTCGT...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGCACGCACGACGTTGGTaGCATCCTCCATCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKHARRW*HPPSWR
Trigger: CCTCCAGGATGGAGGATGCCACCAACGTCGTGCGTG...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAGTCCCGCCCCGCGCATaGGCGACGCAAACACCGCCC +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKVPPRA*ATQTPP
Trigger: GGGCGGTGTTTGCGTCGCTCATGCGCGGGGCGGGAC...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346736.6
ENST00000672786.1
CDS-3UTR TCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTACCTGGGAGAGGCAGGTaGTATGGCACTGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVPGRGR*YGTGLP
Trigger: GGGCAGGCCAGTGCCATATCACCTGCCTCTCCCAGG...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTGTCCGGGGATGCATaGCCGGAATCTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFVSGDA*PESPAP
Trigger: GGGTGCTGGAGATTCCGGTCATGCATCCCCGGACAC...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACCTGGCTCCTGCTTCTaGTTGACACATGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQPGSCF*LTHGPV
Trigger: CACAGGTCCATGTGTCAATCAGAAGCAGGAGCCAGG...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACACAGTTTCCCTCCCTaGAGCCAAGGGTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQHSFPP*SQGWQM
Trigger: CATTTGCCACCCTTGGCTTCAGGGAGGGAAACTGTG...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGCCTCGAGTCCGGAGGTaGAAGATGGAAAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKPRVRR*KMERPE
Trigger: CTCAGGCCTTTCCATCTTTCACCTCCGGACTCGAGG...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR TCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTACCCGGTGGGTGCCCATaGTCAGCCGGTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVPGGCP*SAGSGW
Trigger: CCAACCTGAACCGGCTGATCATGGGCACCCACCGGG...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR GCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGGTTCCTCCCCGTGCTaGTGTGTAGAGGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVGSSPC*CVEGTG
Trigger: ACCTGTTCCCTCTACACAGCAGCACGGGGAGGAACC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGCCTGGTTCCTCCCCGTaGTGCTGTGTAGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVPGSSP*CCVEGT
Trigger: TGTTCCCTCTACACAGCAGCACGGGGAGGAACCAGG...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCACTGGGCGCTGGACTCTaGGATTGTTTCCAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRALGAGL*DCFQAK
Trigger: TTTAGCCTGGAAACAATCGCAGAGTCCAGCGCCCAG...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACCCCTTCAGAATCAATaGTTGGTAGGTGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: GQLPGAQARLKSLGLWETPLQNQ*LVGVPF
Trigger: AAAAGGAACACCTACCAAGCATTGATTCTGAAGGGG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp ACCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGGTTGTGTGTCTGGAGAGGGTCGTCTaGTATTTCTCTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: TTAGRSDELPLVHVQVVCLERVV*YFSVFQ
Trigger: CTGGAACACAGAGAAATAGCAGACGACCCTCTCCAG...ACACACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR GCA 90 bp ACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGGTTGTGTGTGTGCTGGAGAGGGTCGTCTaGTATTTCTCTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: TAGRSDELPLVHVQVVCVLERVV*YFSVFQ
Trigger: CTGGAACACAGAGAAATAGCAGACGACCCTCTCCAG...CACACACACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR GCA 90 bp CGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACTCAAACCACAGCGTGCCTCTGGTCCACGTaGAGGTTGTGTGTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: RCRRFRCEPSRLFTQTTACLWST*RLCVWL
Trigger: TAGCCACACACACAACCTGCACGTGGACCAGAGGCA...CGCTGTGGTTTGAGTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGGTAAACAGCCCAACATaGAACTCTGGGGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQVNSPT*NSGGPH
Trigger: ATGGGGACCCCCAGAGTTCCATGTTGGGCTGTTTAC...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAGGAGGAAGGGGAGCTaGCTCCTTTTCTGGTTGACG +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLRRKGS*LLFWLT
Trigger: CGTCAACCAGAAAAGGAGCCAGCTCCCCTTCCTCCT...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGACTGGATTTTGCAAACTaGGGAACAAACCTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGLDFAN*GTNLPN
Trigger: ATTCGGGAGGTTTGTTCCCCAGTTTGCAAAATCCAG...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAGGTCCCCCAGCTCCGTaGCCTCCTGGAGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKGPPAP*PPGGGP
Trigger: GGGTCCCCCTCCAGGAGGCCACGGAGCTGGGGGACC...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAACTGTCTGCCTGCGTTaGGTCCCCCAGCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVTVCLR*VPQLRG
Trigger: GCCACGGAGCTGGGGGACCCAACGCAGGCAGACAGT...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGCCTTGTTCTGACAGGTaGTCTTGGCTGGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLPCSDR*SWLALC
Trigger: ACAGAGGGCCAGCCAAGACCACCTGTCAGAACAAGG...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGTTGGCCACCGTCACCTaGAACCCTGTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVLATVT*NPVCLR
Trigger: CCTGAGACAGACAGGGTTCCAGGTGACGGTGGCCAA...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGGGTAGGTGTTCCTTTTaGCCACCGTCACCTGGAACC +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLGRCSF*PPSPGT
Trigger: GGTTCCAGGTGACGGTGGCCAAAAGGAACACCTACC...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCACTTCTGATTGACACATaGACCTGTGTCCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRALLIDT*TCVRGC
Trigger: GCATCCCCGGACACAGGTCCATGTGTCAATCAGAAG...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACTCAAAAGGGCATCCTGTATCTaGCTGTCCAGCAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: PWDAVGDSDVNPPGSSLKRASCI*LSSRKS
Trigger: CGACTTCCTGCTGGACAGCCAGATACAGGATGCCCT...TTTGAGTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp CGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACTCAAACCACAGCGAGGGCATCCTGTATCTaGCTGTCCAGCAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: RCRRFRCEPSRLFTQTTARASCI*LSSRKS
Trigger: CGACTTCCTGCTGGACAGCCAGATACAGGATGCCCT...CGCTGTGGTTTGAGTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAGGCTCGGCTGGGCCTTaGCCACTGCAACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVGSAGP*PLQQGL
Trigger: GAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGCC...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000588115.5
ENST00000672786.1
ENST00000672796.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTATCAGCCGGCTCGGCTaGGCCTTGGCCACTGCAACA +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFISRLG*ALATAT
Trigger: TGTTGCAGTGGCCAAGGCCCAGCCGAGCCGGCTGAT...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000588115.5
ENST00000672786.1
ENST00000672796.1
CDS-3UTR CCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACACAGACCTCAAAGTaGCCTACAACTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQTQTSK*PTTPSR
Trigger: CCTGGAGGGAGTTGTAGGCCACTTTGAGGTCTGTGT...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGACACAGACCTCAAAGTaGCCTACAACTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWTQTSK*PTTPSR
Trigger: CCTGGAGGGAGTTGTAGGCCACTTTGAGGTCTGTGT...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACACAGACCTCAAAGTaGCCTACAACTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRATQTSK*PTTPSR
Trigger: CCTGGAGGGAGTTGTAGGCCACTTTGAGGTCTGTGT...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGGAGGTCTGCGGACATaGGGGCTGGGTGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFGGLRT*GLGGKG
Trigger: TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCC...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGCAACTTCCGGGCAACTaGAGGGAGGTTTGTAGGGTC +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKQLPGN*REVCRV
Trigger: GACCCTACAAACCTCCCTTCAGTTGCCCGGAAGTTG...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGCACAGTTTCCCTCCCTaGAGCCAAGGGTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKHSFPP*SQGWQM
Trigger: CATTTGCCACCCTTGGCTTCAGGGAGGGAAACTGTG...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCGAAAGAAACAAATTCTaGACCATCCATACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGERNKF*TIHTWL
Trigger: GAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTC...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGGCCACAGAAGTCGTTaGGGACCCTCTGTCCTTATC +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVGHRSR*GPSVLI
Trigger: GATAAGGACAGAGGGTCCTCAACGACTTCTGTGGCC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR GCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGAGGAGCATCCCAGGCTaGTATGAGTCCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVRSIPG*YESLPL
Trigger: AAGGGGAAGGGACTCATAGCAGCCTGGGATGCTCCT...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGTCTGTGCTCAGGTCTaGGATGACAACCATCCCGAG +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVVCAQV*DDNHPE
Trigger: CTCGGGATGGTTGTCATCGCAGACCTGAGCACAGAC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGTCTGTGCTCAGGTCTaGGATGACAACCATCCCGAG +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKVCAQV*DDNHPE
Trigger: CTCGGGATGGTTGTCATCGCAGACCTGAGCACAGAC...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACTGGAGAGGGTCGTCTaGTATTTCTCTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGLERVV*YFSVFQ
Trigger: CTGGAACACAGAGAAATAGCAGACGACCCTCTCCAG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTCCAGGTGCCCTGGTCTaGAGAATGAGGCAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFPGALV*RMRQVV
Trigger: GACCACCTGCCTCATTCTGCAGACCAGGGCACCTGG...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGAAGAGTCTGCCCAGGTaGCCTGGTCTGCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKKSLPR*PGLQNE
Trigger: CTCATTCTGCAGACCAGGGCACCTGGGCAGACTCTT...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGTAAACAGCCCAACATaGAACTCTGGGGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQVNSPT*NSGGPH
Trigger: ATGGGGACCCCCAGAGTTCCATGTTGGGCTGTTTAC...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGGTAAACAGCCCAACATaGAACTCTGGGGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLVNSPT*NSGGPH
Trigger: ATGGGGACCCCCAGAGTTCCATGTTGGGCTGTTTAC...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGAGGAGGAAGGGGAGCTaGCTCCTTTTCTGGTTGACG +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKRRKGS*LLFWLT
Trigger: CGTCAACCAGAAAAGGAGCCAGCTCCCCTTCCTCCT...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGCTCCCGAATGAGTTCTaGGAAGGAGGAAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVLPNEF*EGGRGA
Trigger: AGCTCCCCTTCCTCCTTCCCAGAACTCATTCGGGAG...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGCTGGACTCTGGGCGCTaGACTCTGCGATTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVLDSGR*TLRLFP
Trigger: TGGAAACAATCGCAGAGTCCAGCGCCCAGAGTCCAG...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGGTAGGTGTTCCTTTTaGCCACCGTCACCTGGAACC +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVGRCSF*PPSPGT
Trigger: GGTTCCAGGTGACGGTGGCCAAAAGGAACACCTACC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTTCTGATTGACACATaGACCTGTGTCCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQLLIDT*TCVRGC
Trigger: GCATCCCCGGACACAGGTCCATGTGTCAATCAGAAG...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGCTCTTGAGCAGGACCTaGCTCCTGCTTCTGATTGAC +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLLLSRT*LLLLID
Trigger: GTCAATCAGAAGCAGGAGCCAGGTCCTGCTCAAGAG...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGACATGGGGGCTGGGTaGCAAAGGAAACACAGACCT +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVDMGAG*QRKHRP
Trigger: AGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTCAAATCCGGACAGGATaGGCCCTGCTCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFQIRTG*ALLRGG
Trigger: GCCACCTCTGAGCAGGGCCCATCCTGTCCGGATTTG...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTTGGCATCCTCCATCCTaGAGGCCTCAGAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFWHPPS*RPQRPG
Trigger: TCCAGGCCTCTGAGGCCTCCAGGATGGAGGATGCCA...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR TCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAATTTTATCTTCCCCTTaGGAAATCTGCGCGCGCTCT +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAILSSP*EICARS
Trigger: AGAGCGCGCGCAGATTTCTCAAGGGGAAGATAAAAT...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346736.6
ENST00000672786.1
CDS-3UTR TCA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGATTTTATCTTCCCCTTaGGAAATCTGCGCGCGCTCT +
Preference number: 4 (lower is better)
Translates to: SILEEVCGHGGWVAKETQILSSP*EICARS
Trigger: AGAGCGCGCGCAGATTTCTCAAGGGGAAGATAAAAT...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346736.6
ENST00000672786.1
CDS-3UTR TCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAACAAACCTCCCGAATaGGTTCTGGGAAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLNKPPE*VLGRRK
Trigger: CTTCCTCCTTCCCAGAACTCATTCGGGAGGTTTGTT...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAAACTCGGCTTCCTCTTaGGCAGGACCTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVNSASS*AGPGSC
Trigger: GCAGGAGCCAGGTCCTGCTCAAGAGGAAGCCGAGTT...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAGAAAGAAACAAATTCTaGACCATCCATACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGERNKF*TIHTWL
Trigger: GAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTC...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAGAAAGAAACAAATTCTaGACCATCCATACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTERNKF*TIHTWL
Trigger: GAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTC...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGGTTCCTCCCCGTGCTaGTGTGTAGAGGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFGSSPC*CVEGTG
Trigger: ACCTGTTCCCTCTACACAGCAGCACGGGGAGGAACC...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGTGTCTTCCTGGATTTTaGAAACTGGGGAACAAACCT +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKCLPGF*KLGNKP
Trigger: AGGTTTGTTCCCCAGTTTGCAAAATCCAGGAAGACA...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGTGTCTGTCTCAGGCTTaGTGTCATCGGCCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVCLSQA*CHRPLV
Trigger: AACAAGGGGCCGATGACAGCAAGCCTGAGACAGACA...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGCTGGAGAGGGTCGTCTaGTATTTCTCTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLLERVV*YFSVFQ
Trigger: CTGGAACACAGAGAAATAGCAGACGACCCTCTCCAG...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTCCTCATCAGGGGAGCTaGAGACGGCCTTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFPHQGS*RRPFLV
Trigger: AACCAGGAAAGGCCGTCTCCAGCTCCCCTGATGAGG...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTAGCTGGCTCCTTTTCTaGTTGACGGAGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFSWLLF*LTEEPA
Trigger: TGCCGGCTCCTCCGTCAACCAGAAAAGGAGCCAGCT...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGAAGCTCCGTGGCCTCCTaGAGGGGGACCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGSSVAS*RGTPRV
Trigger: GACCCTGGGGGTCCCCCTCCAGGAGGCCACGGAGCT...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGGGGGCTCCTCTGTCTaGCTTCTCCCCTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFGGSSV*LLPFRI
Trigger: GATTCTGAAGGGGAGAAGCCAGACAGAGGAGCCCCC...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTCTGCCAGCTCTGAGGTaGTGTCTGGAATGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFLPALR*CLECPA
Trigger: AGCAGGGCATTCCAGACACCACCTCAGAGCTGGCAG...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGACACAGACCTCAAAGTaGCCTACAACTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKTQTSK*PTTPSR
Trigger: CCTGGAGGGAGTTGTAGGCCACTTTGAGGTCTGTGT...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTTGCGGACATGGGGGCTaGGTGGCAAAGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFCGHGG*VAKETQ
Trigger: CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCA...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTACCCCCTGGAGCATCTTaGAGGAGGTCTGCGGACATG +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVPPGAS*RRSADM
Trigger: CATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTCACAGTTTCCCTCCCTaGAGCCAAGGGTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFHSFPP*SQGWQM
Trigger: CATTTGCCACCCTTGGCTTCAGGGAGGGAAACTGTG...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGGAAAGAAACAAATTCTaGACCATCCATACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKERNKF*TIHTWL
Trigger: GAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTC...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAGGGCTCTGGCTGCTCTaGTCAGGGCGGGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKGLWLL*SGRALS
Trigger: AGACAGTGCCCGCCCTGAGCAGAGCAGCCAGAGCCC...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTACTTGCCATCCTGCCCTaGCTCCCCACTTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVLAILP*LPTFSC
Trigger: ACAGGAGAAAGTGGGGAGGCAGGGCAGGATGGCAAG...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGAATCAGAAACGAGCTCTaGCTGGATCAGTTGGGAATA +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGIRNEL*LDQLGI
Trigger: TATTCCCAACTGATCCAGGCAGAGCTCGTTTCTGAT...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAAGCTGGCTCCTTTTCTaGTTGACGGAGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVSWLLF*LTEEPA
Trigger: TGCCGGCTCCTCCGTCAACCAGAAAAGGAGCCAGCT...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACTGGATTTTGCAAACTaGGGAACAAACCTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGLDFAN*GTNLPN
Trigger: ATTCGGGAGGTTTGTTCCCCAGTTTGCAAAATCCAG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAACTGTCTGCCTGCGTTaGGTCCCCCAGCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKTVCLR*VPQLRG
Trigger: GCCACGGAGCTGGGGGACCCAACGCAGGCAGACAGT...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAGGGGGCTCCTCTGTCTaGCTTCTCCCCTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVGGSSV*LLPFRI
Trigger: GATTCTGAAGGGGAGAAGCCAGACAGAGGAGCCCCC...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTAGGGCATCCTGTATCTaGCTGTCCAGCAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFRASCI*LSSRKS
Trigger: CGACTTCCTGCTGGACAGCCAGATACAGGATGCCCT...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTAAAGAGCTGCTCAGGTaGGGCTTCGAAGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFKELLR*GFEVRG
Trigger: GCCTCTGACTTCGAAGCCCCACCTGAGCAGCTCTTT...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAACATTGGCATGTGAGCTaGGGCCCGGCCAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKHWHVS*GPASKG
Trigger: GCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATG...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGACATGGGGGCTGGGTaGCAAAGGAAACACAGACCT +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFDMGAG*QRKHRP
Trigger: AGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTC...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGCCTTTGTGTTGTCCATaGAAGACCAACTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKPLCCP*KTNFRA
Trigger: TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTACAACTTCCGGGCAACTaGAGGGAGGTTTGTAGGGTC +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVQLPGN*REVCRV
Trigger: GACCCTACAAACCTCCCTTCAGTTGCCCGGAAGTTG...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTACACAGTTTCCCTCCCTaGAGCCAAGGGTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVHSFPP*SQGWQM
Trigger: CATTTGCCACCCTTGGCTTCAGGGAGGGAAACTGTG...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGACCCGGTGGGTGCCCATaGTCAGCCGGTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGPGGCP*SAGSGW
Trigger: CCAACCTGAACCGGCTGATCATGGGCACCCACCGGG...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGAGCTGAGAATCCCCACTaGCGGGCACCGCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGAENPH*RAPPAQ
Trigger: CTGTGCAGGCGGTGCCCGGCAGTGGGGATTCTCAGC...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCACCCCTTCAGAATCAATaGTTGGTAGGTGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAPLQNQ*LVGVPF
Trigger: AAAAGGAACACCTACCAAGCATTGATTCTGAAGGGG...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACCCCTTCAGAATCAATaGTTGGTAGGTGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGPLQNQ*LVGVPF
Trigger: AAAAGGAACACCTACCAAGCATTGATTCTGAAGGGG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAAGGAGCATCCCAGGCTaGTATGAGTCCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVRSIPG*YESLPL
Trigger: AAGGGGAAGGGACTCATAGCAGCCTGGGATGCTCCT...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGATCAGAAACGAGCTCTaGCTGGATCAGTTGGGAATA +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLIRNEL*LDQLGI
Trigger: TATTCCCAACTGATCCAGGCAGAGCTCGTTTCTGAT...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTACTCCCGAATGAGTTCTaGGAAGGAGGAAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVLPNEF*EGGRGA
Trigger: AGCTCCCCTTCCTCCTTCCCAGAACTCATTCGGGAG...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAACCCCGTCCCCCTGTCTaGAGGGTCATCAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKPRPPV*RVIRLR
Trigger: TCTCAGCCTGATGACCCTCCAGACAGGGGGACGGGG...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGAGCTTCCAGGTCCCGGTaGGTGCCCATGATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGASRSR*VPMISR
Trigger: CCGGCTGATCATGGGCACCCACCGGGACCTGGAAGC...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTACACAGACCTCAAAGTaGCCTACAACTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFTQTSK*PTTPSR
Trigger: CCTGGAGGGAGTTGTAGGCCACTTTGAGGTCTGTGT...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAGACATGGGGGCTGGGTaGCAAAGGAAACACAGACCT +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVDMGAG*QRKHRP
Trigger: AGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTC...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAAGGTGGCCAGCTTCCTaGAGCCCAGGCCCGCTTGAA +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKRWPAS*SPGPLE
Trigger: TTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCACCT...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAATCCTCGGCTGGGCCTTaGCCACTGCAACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKSSAGP*PLQQGL
Trigger: GAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGGA...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGACTGTGGTTTCCCCAGTaGGCGAGGTGCAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGLWFPQ*ARCSLA
Trigger: TGCCAGGCTGCACCTCGCTCACTGGGGAAACCACAG...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR TCA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGAGAAAGAAACAAATTCTaGACCATCCATACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGERNKF*TIHTWL
Trigger: GAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTC...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAATGGAGAGCTCAACGATaGGGCCACGCACGACGTTGG +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKWRAQR*GHARRW
Trigger: CCAACGTCGTGCGTGGCCTCATCGTTGAGCTCTCCA...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAGTAAACAGCCCAACATaGAACTCTGGGGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVVNSPT*NSGGPH
Trigger: ATGGGGACCCCCAGAGTTCCATGTTGGGCTGTTTAC...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGAGGAGACGGCCTTTCCTaGTTCCTCCCCGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGGDGLS*FLPVLL
Trigger: CAGCAGCACGGGGAGGAACCAGGAAAGGCCGTCTCC...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAATCTGACAGGTGGTCTTaGCTGGCCCTCTGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKSDRWS*LALCEA
Trigger: CGCCTCACAGAGGGCCAGCCAAGACCACCTGTCAGA...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTACTCTTGAGCAGGACCTaGCTCCTGCTTCTGATTGAC +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVLLSRT*LLLLID
Trigger: GTCAATCAGAAGCAGGAGCCAGGTCCTGCTCAAGAG...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAACACAGACCTCAAAGTaGCCTACAACTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVTQTSK*PTTPSR
Trigger: CCTGGAGGGAGTTGTAGGCCACTTTGAGGTCTGTGT...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAACGAAGGTCCTCGGCTaGGCCTTGGCCACTGCAACA +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKTKVLG*ALATAT
Trigger: TGTTGCAGTGGCCAAGGCCCAGCCGAGGACCTTCGT...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR TCA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGGAAAGAAACAAATTCTaGACCATCCATACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLERNKF*TIHTWL
Trigger: GAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTC...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR GCA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGTGTCTTCCTGGATTTTaGAAACTGGGGAACAAACCT +
Preference number: 4 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVCLPGF*KLGNKP
Trigger: AGGTTTGTTCCCCAGTTTGCAAAATCCAGGAAGACA...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAACTTGCCATCCTGCCCTaGCTCCCCACTTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKLAILP*LPTFSC
Trigger: ACAGGAGAAAGTGGGGAGGCAGGGCAGGATGGCAAG...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAACTGCCAGCTCTGAGGTaGTGTCTGGAATGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKLPALR*CLECPA
Trigger: AGCAGGGCATTCCAGACACCACCTCAGAGCTGGCAG...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAATCCACTAGGACCCCCTaGAGCATCTTGGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKSTRTP*SILEEV
Trigger: GACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGA...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGATGGCATCCTCCATCCTaGAGGCCTCAGAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGWHPPS*RPQRPG
Trigger: TCCAGGCCTCTGAGGCCTCCAGGATGGAGGATGCCA...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGACCTGGTTCCTCCCCGTaGTGCTGTGTAGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGPGSSP*CCVEGT
Trigger: TGTTCCCTCTACACAGCAGCACGGGGAGGAACCAGG...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAAGGAGCATCCCAGGCTaGTATGAGTCCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKRSIPG*YESLPL
Trigger: AAGGGGAAGGGACTCATAGCAGCCTGGGATGCTCCT...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGAACCTGTGTCCGGGGATaGATGACCGGAATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGTCVRG*MTGISS
Trigger: GCTGGAGATTCCGGTCATGCATCCCCGGACACAGGT...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAAGGAGGAAGGGGAGCTaGCTCCTTTTCTGGTTGACG +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKRRKGS*LLFWLT
Trigger: CGTCAACCAGAAAAGGAGCCAGCTCCCCTTCCTCCT...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAACCTTGTTCTGACAGGTaGTCTTGGCTGGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKPCSDR*SWLALC
Trigger: ACAGAGGGCCAGCCAAGACCACCTGTCAGAACAAGG...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGAGGGGGCTCCTCTGTCTaGCTTCTCCCCTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGGGSSV*LLPFRI
Trigger: GATTCTGAAGGGGAGAAGCCAGACAGAGGAGCCCCC...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAATCTCTTCCAGCTCAGTaGGGTCTGTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKSLPAQ*GLCSGL
Trigger: CAGACCTGAGCACAGACCCCACTGAGCTGGAAGAGA...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGATCCGGAGGTGAAAGATaGAAAGGCCTGAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGSGGER*KGLRVG
Trigger: GCCCACCCTCAGGCCTTTCCATCTTTCACCTCCGGA...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR GCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAATGTCTGTCTCAGGCTTaGTGTCATCGGCCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKCLSQA*CHRPLV
Trigger: AACAAGGGGCCGATGACAGCAAGCCTGAGACAGACA...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAGTAAACAGCCCAACATaGAACTCTGGGGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKVNSPT*NSGGPH
Trigger: ATGGGGACCCCCAGAGTTCCATGTTGGGCTGTTTAC...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGAAGGAGGAAGGGGAGCTaGCTCCTTTTCTGGTTGACG +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGRRKGS*LLFWLT
Trigger: CGTCAACCAGAAAAGGAGCCAGCTCCCCTTCCTCCT...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGACTCCCGAATGAGTTCTaGGAAGGAGGAAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGLPNEF*EGGRGA
Trigger: AGCTCCCCTTCCTCCTTCCCAGAACTCATTCGGGAG...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAACTTCTGATTGACACATaGACCTGTGTCCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKLLIDT*TCVRGC
Trigger: GCATCCCCGGACACAGGTCCATGTGTCAATCAGAAG...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAACACAGACCTCAAAGTaGCCTACAACTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKTQTSK*PTTPSR
Trigger: CCTGGAGGGAGTTGTAGGCCACTTTGAGGTCTGTGT...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAAACAAACCTCCCGAATaGGTTCTGGGAAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKNKPPE*VLGRRK
Trigger: CTTCCTCCTTCCCAGAACTCATTCGGGAGGTTTGTT...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGACTGGGCGCTGGACTCTaGGATTGTTTCCAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGLGAGL*DCFQAK
Trigger: TTTAGCCTGGAAACAATCGCAGAGTCCAGCGCCCAG...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR GCA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTACCCCTTCAGAATCAATaGTTGGTAGGTGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVPLQNQ*LVGVPF
Trigger: AAAAGGAACACCTACCAAGCATTGATTCTGAAGGGG...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
3UTR CAA 72 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTaGGCTCAGGACCCTAAAATTTGCAAATCCGGACAG +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPY*AQDPKICKSGQ
Trigger: CTGTCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGACTGGATTTTGCAAACTaGGGAACAAACCTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGLDFAN*GTNLPN
Trigger: ATTCGGGAGGTTTGTTCCCCAGTTTGCAAAATCCAG...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAGAAAGAAACAAATTCTaGACCATCCATACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKERNKF*TIHTWL
Trigger: GAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTC...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR GCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGATGTCTTCCTGGATTTTaGAAACTGGGGAACAAACCT +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGCLPGF*KLGNKP
Trigger: AGGTTTGTTCCCCAGTTTGCAAAATCCAGGAAGACA...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR TCA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGAGAAAGAAACAAATTCTaGACCATCCATACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: QILNHPYLAQDPKICKSGERNKF*TIHTWL
Trigger: GAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTC...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS CCA 90 bp GTGGCCGCGCTCCGGTGCGGCGGCGCCCGAGGCCCGAGGCGGAAGTaGGACGGCCAAGCAGGGAAGCGAGGGCTCGGGATCGACGGCCGC +
Preference number: 5 (lower is better)
Translates to: VAALRCGGARGPRRK*DGQAGKRGLGIDGR
Trigger: GCGGCCGTCGATCCCGAGCCCTCGCTTCCCTGCTTGGCCGTCCCACTTCCGCCTCGGGCCTCGGGCGCCGCCGCACCGGAGCGCGGCCAC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585755.1
ENST00000671728.1
CDS GCA 90 bp GAAGCGAGGGCTCGGGATCGACGGCCGCGGGGCGCCGACGAGGAGTaGAGGACTCAGGAAGGGCGAGTGCGCGGCGACAGAGCCCGGGGA +
Preference number: 5 (lower is better)
Translates to: EARARDRRPRGADEE*RTQEGRVRGDRARG
Trigger: TCCCCGGGCTCTGTCGCCGCGCACTCGCCCTTCCTGAGTCCTGCACTCCTCGTCGGCGCCCCGCGGCCGTCGATCCCGAGCCCTCGCTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585755.1
ENST00000671728.1
CDS GCA 90 bp CGCCTGCACAGGGCTCTGGCTGCTCTGCTCAGGGCGGGCACTGTCTaGCTGCGTTGGGTCCCCCAGCTCCGTGGCCTCCTGGAGGGGGAC +
Preference number: 5 (lower is better)
Translates to: RLHRALAALLRAGTV*LRWVPQLRGLLEGD
Trigger: GTCCCCCTCCAGGAGGCCACGGAGCTGGGGGACCCAACGCAGGCAGACAGTGCCCGCCCTGAGCAGAGCAGCCAGAGCCCTGTGCAGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS GCA 90 bp GAATCCCCACTGCCGGGCACCGCCTGCACAGGGCTCTGGCTGCTCTaGTCAGGGCGGGCACTGTCTGCCTGCGTTGGGTCCCCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ESPLPGTACTGLWLL*SGRALSACVGSPSS
Trigger: GGAGCTGGGGGACCCAACGCAGGCAGACAGTGCCCGCCCTGAGCAGAGCAGCCAGAGCCCTGTGCAGGCGGTGCCCGGCAGTGGGGATTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS GCA 90 bp GCTGAGAATCCCCACTGCCGGGCACCGCCTGCACAGGGCTCTGGCTaGTCTGCTCAGGGCGGGCACTGTCTGCCTGCGTTGGGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: AENPHCRAPPAQGSG*SAQGGHCLPALGPP
Trigger: TGGGGGACCCAACGCAGGCAGACAGTGCCCGCCCTGAGCAGAGCAGCCAGAGCCCTGTGCAGGCGGTGCCCGGCAGTGGGGATTCTCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS CCA 90 bp GCCGCCCTCTCGGCTGGGCCTTGGCCACTGCAACAGGGTCTCCATTaGCATGTGAGCTGGGGCCCGGCCAGCAAGGGCCCGGCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: AALSAGPWPLQQGLH*HVSWGPASKGPACS
Trigger: GGAACAAGCCGGGCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGAGGGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS TCA 90 bp GCTCGGCTGGGCCTTGGCCACTGCAACAGGGTCTCCATTGGCATGTaGGCTGGGGCCCGGCCAGCAAGGGCCCGGCTTGTTCCCCGAAGG +
Preference number: 5 (lower is better)
Translates to: ARLGLGHCNRVSIGM*AGARPARARLVPRR
Trigger: CCTTCGGGGAACAAGCCGGGCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000588115.5
ENST00000672786.1
ENST00000672796.1
CDS TCA 90 bp CCTCGGCTGGGCCTTGGCCACTGCAACAGGGTCTCCATTGGCATGTaGGCTGGGGCCCGGCCAGCAAGGGCCCGGCTTGTTCCCCGAAGG +
Preference number: 5 (lower is better)
Translates to: PRLGLGHCNRVSIGM*AGARPARARLVPRR
Trigger: CCTTCGGGGAACAAGCCGGGCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586783.5
ENST00000589393.1
ENST00000591586.5
ENST00000672170.1
ENST00000672346.1
ENST00000673392.1
CDS CCA 90 bp TCAGCCGGCTCGGCTGGGCCTTGGCCACTGCAACAGGGTCTCCATTaGCATGTGAGCTGGGGCCCGGCCAGCAAGGGCCCGGCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: SAGSAGPWPLQQGLH*HVSWGPASKGPACS
Trigger: GGAACAAGCCGGGCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGCCGGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000588115.5
ENST00000672786.1
ENST00000672796.1
CDS TCA 90 bp CCTCCTGTGGCCTCCATCAGCGGCCTTCCTCCTGGGAGAGGCAGGTaGTATGGCACTGGCCTGCCCATCGGGCCCAGCCACCTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: PPVASISGLPPGRGR*YGTGLPIGPSHLQS
Trigger: GCTCTGGAGGTGGCTGGGCCCGATGGGCAGGCCAGTGCCATATCACCTGCCTCTCCCAGGAGGAAGGCCGCTGATGGAGGCCACAGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
CDS TCA 90 bp TCTCGGCTGGGCCTTGGCCACTGCAACAGGGTCTCCATTGGCATGTaGGCTGGGGCCCGGCCAGCAAGGGCCCGGCTTGTTCCCCGAAGG +
Preference number: 5 (lower is better)
Translates to: SRLGLGHCNRVSIGM*AGARPARARLVPRR
Trigger: CCTTCGGGGAACAAGCCGGGCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS CCA 90 bp CGAAGGTCCTCGGCTGGGCCTTGGCCACTGCAACAGGGTCTCCATTaGCATGTGAGCTGGGGCCCGGCCAGCAAGGGCCCGGCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: RRSSAGPWPLQQGLH*HVSWGPASKGPACS
Trigger: GGAACAAGCCGGGCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGGACCTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACTGTCTGCCTGCGTaGGGTCCCCCAGCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: GQLPGAQARLKSLGLWETHCLPA*GPPAPW
Trigger: CCACGGAGCTGGGGGACCCAACGCAGGCAGACAGTG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACCACTGTCTGCCTGCGTaGGGTCCCCCAGCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDHCLPA*GPPAPW
Trigger: CCACGGAGCTGGGGGACCCAACGCAGGCAGACAGTG...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACGGCTCGGCTGGGCCTaGGCCACTGCAACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: GQLPGAQARLKSLGLWETRLGWA*ATATGS
Trigger: AGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGCCG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000588115.5
ENST00000672786.1
ENST00000672796.1
CDS TCA 90 bp AGGACTCCACAGGCCGAGAGCCCACGTGAAGCCGGAGCCCGTCGGTaGCTGACAGACGCTCTGAACCCCACAGATGTCGCCGCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: RTPQAESPREAGARR*LTDALNPTDVAAPH
Trigger: GTGAGGGGCGGCGACATCTGTGGGGTTCAGAGCGTCTGTCAGTCACCGACGGGCTCCGGCTTCACGTGGGCTCTCGGCCTGTGGAGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS TCA 90 bp CGCCGACCACCGAGAAGTGAGGACTCCACAGGCCGAGAGCCCACGTaGAGCCGGAGCCCGTCGGTGACTGACAGACGCTCTGAACCCCAC +
Preference number: 5 (lower is better)
Translates to: RRPPRSEDSTGREPT*SRSPSVTDRRSEPH
Trigger: GTGGGGTTCAGAGCGTCTGTCAGTCACCGACGGGCTCCGGCTTCACGTGGGCTCTCGGCCTGTGGAGTCCTCACTTCTCGGTGGTCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS TCA 90 bp CCCGGTGACAAGCCCCACACTGACACTACGCCGACCACCGAGAAGTaGGGACTCCACAGGCCGAGAGCCCACGTGAAGCCGGAGCCCGTC +
Preference number: 5 (lower is better)
Translates to: PGDKPHTDTTPTTEK*GLHRPRAHVKPEPV
Trigger: GACGGGCTCCGGCTTCACGTGGGCTCTCGGCCTGTGGAGTCCTCACTTCTCGGTGGTCGGCGTAGTGTCAGTGTGGGGCTTGTCACCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS CCA 90 bp TGTGGCCTCCATCAGCGGCCTTCCTCCTGGGAGAGGCAGGTGATATaGCACTGGCCTGCCCATCGGGCCCAGCCACCTCCAGAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: CGLHQRPSSWERQVI*HWPAHRAQPPPEPS
Trigger: AGAGGGCTCTGGAGGTGGCTGGGCCCGATGGGCAGGCCAGTGCCATATCACCTGCCTCTCCCAGGAGGAAGGCCGCTGATGGAGGCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
CDS-3UTR CAA 90 bp CCAGGACGGTGGGGAGGGGAGCTGCATTGGCCCTGGGACGCTGTCGGAGATTCACCTCTCGGCTGGGCCTaGGCCACTGCAACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PGRWGGELHWPWDAVGDSPLGWA*ATATGS
Trigger: AGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGAGG...TGAATCTCCGACAGCGTCCCAGGGCCAATGCAGCTCCCCTCCCCACCGTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CAA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGGTCCTCGGCTGGGCCTaGGCCACTGCAACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PPGASWRRSADMGAGWQRVLGWA*ATATGS
Trigger: AGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGGAC...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCGTCCTCGGCTGGGCCTaGGCCACTGCAACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGVLGWA*ATATGS
Trigger: AGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGGAC...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS TCA 90 bp CTGGTCTGCAGAATGAGGCAGGTGGTCTCGCTGCCCTGCCAGCTCTaGGGTGGTGTCTGGAATGCCCTGCTGAGCCCCGGGCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LVCRMRQVVSLPCQL*GGVWNALLSPGLLE
Trigger: CTCCAGGAGCCCGGGGCTCAGCAGGGCATTCCAGACACCACCTCAGAGCTGGCAGGGCAGCGAGACCACCTGCCTCATTCTGCAGACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000591439.5
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
ENST00000673129.1
CDS CCA 90 bp TCCGTGGCCTCCTGGAGGGGGACCCCCAGGGTCTCCACTAGCAGCTaGCATCCTGGACTCTGGGCGCTGGACTCTGCGATTGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SVASWRGTPRVSTSS*HPGLWALDSAIVSR
Trigger: CCTGGAAACAATCGCAGAGTCCAGCGCCCAGAGTCCAGGATGCCAGCTGCTAGTGGAGACCCTGGGGGTCCCCCTCCAGGAGGCCACGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS CCA 90 bp GCTGGGCCTTGGCCACTGCAACAGGGTCTCCATTGGCATGTGAGCTaGGGCCCGGCCAGCAAGGGCCCGGCTTGTTCCCCGAAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: AGPWPLQQGLHWHVS*GPASKGPACSPKER
Trigger: TCTTTCCTTCGGGGAACAAGCCGGGCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000589393.1
ENST00000591439.5
ENST00000591586.5
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
ENST00000672796.1
ENST00000673129.1
ENST00000673392.1
CDS CCA 90 bp TGGCCCTCACAGAACGCTGGAGGCCTCGAGTCCGGAGGTGAAAGATaGAAAGGCCTGAGGGTGGGCGCTGTAGACCCCGCTCCCGGTGAC +
Preference number: 5 (lower is better)
Translates to: WPSQNAGGLESGGER*KGLRVGAVDPAPGD
Trigger: GTCACCGGGAGCGGGGTCTACAGCGCCCACCCTCAGGCCTTTCCATCTTTCACCTCCGGACTCGAGGCCTCCAGCGTTCTGTGAGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR CAA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGCAGCAAGGGCCCGGCTaGTTCCCCGAAGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: PPGASWRRSADMGAGWQRQQGPG*FPEGKS
Trigger: GCTCTTTCCTTCGGGGAACAAGCCGGGCCCTTGCTG...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACGCAACAGGGTCTCCATaGGCATGTGAGCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDATGSP*ACELGP
Trigger: GGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGC...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCGGCCTCGGCTGGGCCTaGGCCACTGCAACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: LQRGRFKCQVTERAATQRGLGWA*ATATGS
Trigger: AGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGGCC...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CAA 90 bp GAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTGGCCTCGGCTGGGCCTaGGCCACTGCAACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: ERQVQVPGNREGSHPALAGLGWA*ATATGS
Trigger: AGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGGCC...AGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS CCA 90 bp GTGGTTTCCCCAGTGAGCGAGGTGCAGCCTGGCAAGGCCCTCCTGTaGCCTCCATCAGCGGCCTTCCTCCTGGGAGAGGCAGGTGATATG +
Preference number: 5 (lower is better)
Translates to: VVSPVSEVQPGKALL*PPSAAFLLGEAGDM
Trigger: CATATCACCTGCCTCTCCCAGGAGGAAGGCCGCTGATGGAGGCCACAGGAGGGCCTTGCCAGGCTGCACCTCGCTCACTGGGGAAACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
CDS CCA 90 bp GGTCCTGGCCAGCAGGGAAGGAAATTGAGAGTGGCCCGACCTCACTaGACTACCAGAGCTCTCCAGTGGGAGGGGCTTCCGCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: GPGQQGRKLRVARPH*TTRALQWEGLPQGL
Trigger: GAGGCCCTGCGGAAGCCCCTCCCACTGGAGAGCTCTGGTAGTCCAGTGAGGTCGGGCCACTCTCAATTTCCTTCCCTGCTGGCCAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586500.1
ENST00000673175.1
CDS-3UTR CAA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACGGAACAGGTCCCAATTaGCCCTCTGGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDGTGPN*PSGSSG
Trigger: CCCTGAGGAGCCAGAGGGCAAATTGGGACCTGTTCC...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGGGAACAGGTCCCAATTaGCCCTCTGGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: PPGASWRRSADMGAGWQRGTGPN*PSGSSG
Trigger: CCCTGAGGAGCCAGAGGGCAAATTGGGACCTGTTCC...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACAGCAAGGGCCCGGCTaGTTCCCCGAAGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTQQGPG*FPEGKS
Trigger: GCTCTTTCCTTCGGGGAACAAGCCGGGCCCTTGCTG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS TCA 90 bp GCCAAATTGGCCCTCACAGAACGCTGGAGGCCTCGAGTCCGGAGGTaGAAGATGGAAAGGCCTGAGGGTGGGCGCTGTAGACCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: AKLALTERWRPRVRR*KMERPEGGRCRPRS
Trigger: GGAGCGGGGTCTACAGCGCCCACCCTCAGGCCTTTCCATCTTTCACCTCCGGACTCGAGGCCTCCAGCGTTCTGTGAGGGCCAATTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR CAA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAGGAACAGGTCCCAATTaGCCCTCTGGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGGTGPN*PSGSSG
Trigger: CCCTGAGGAGCCAGAGGGCAAATTGGGACCTGTTCC...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp AGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCTGGCTTCGCAGCAAGGGCCCGGCTaGTTCCCCGAAGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: RQVQVPGNREGSHPALASQQGPG*FPEGKS
Trigger: GCTCTTTCCTTCGGGGAACAAGCCGGGCCCTTGCTG...CGAAGCCAGCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CAA 90 bp CTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCCAGCAAGGGCCCGGCTaGTTCCCCGAAGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: LQRGRFKCQVTERAATQRQQGPG*FPEGKS
Trigger: GCTCTTTCCTTCGGGGAACAAGCCGGGCCCTTGCTG...GCGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CAA 90 bp CCGCCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCGCAACAGGGTCTCCATaGGCATGTGAGCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: PPLQRGRFKCQVTERAATATGSP*ACELGP
Trigger: GGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGC...GGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CAA 90 bp CCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGGTTGTGTGTGGCAACAGGGTCTCCATaGGCATGTGAGCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: PQRAALMNCLWSTCRLCVATGSP*ACELGP
Trigger: GGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGC...CACACACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CAA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGGGAGCCCAGGCCCGCTaGAAGTCACTGGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWGAQAR*KSLGLW
Trigger: CCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCC...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS TCA 90 bp GAGGCCTGGATCCCCACGAAGGTCCTGGCCAGCAGGGAAGGAAATTaGGAGTGGCCCGACCTCACTGGACTACCAGAGCTCTCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: EAWIPTKVLASREGN*EWPDLTGLPELSSG
Trigger: CCCACTGGAGAGCTCTGGTAGTCCAGTGAGGTCGGGCCACTCTCAATTTCCTTCCCTGCTGGCCAGGACCTTCGTGGGGATCCAGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586500.1
ENST00000673175.1
CDS CCA 90 bp CTGGTCCACGTGCAGGTTGTGTGTGTGGCTAAGGGAGGTGGCCAGTaGCACAGCAGGTACAAGTCACAGGGAGTGACGGCAGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: LVHVQVVCVAKGGGQ*HSRYKSQGVTAGGR
Trigger: CCTGCCTCCTGCCGTCACTCCCTGTGACTTGTACCTGCTGTGCCACTGGCCACCTCCCTTAGCCACACACACAACCTGCACGTGGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CAA 90 bp CCTCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCAGCACAACAGAGGCTaGCGGGGACACACGGAACCC +
Preference number: 5 (lower is better)
Translates to: PLQRGRFKCQVTERAATQQHNRG*RGHTEP
Trigger: GGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCTG...CTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CAA 90 bp TCTGCAGAGAGGCAGGTTCAAGTGCCAGGTAACAGAGAGGGCAGCCACCCAGCGCAGCACAACAGAGGCTaGCGGGGACACACGGAACCC +
Preference number: 5 (lower is better)
Translates to: SAERQVQVPGNREGSHPAQHNRG*RGHTEP
Trigger: GGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCTG...CGCTGGGTGGCTGCCCTCTCTGTTACCTGGCACTTGAACCTGCCTCTCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589393.1
ENST00000672346.1
CDS-3UTR CAA 90 bp AACCCTCCCGGCTCTTCACTCAAACCACAGCGGGCCGCTCTGATGAACTGCCTCGCAACAGGGTCTCCATaGGCATGTGAGCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: NPPGSSLKPQRAALMNCLATGSP*ACELGP
Trigger: GGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGC...GAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTGAGTGAAGAGCCGGGAGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CAA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACAACCTCACGGCCTCCTTaGTGTTGTCCATGGAAGACC +
Preference number: 5 (lower is better)
Translates to: GQLPGAQARLKSLGLWETTSRPP*CCPWKT
Trigger: GGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGT...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CGGTGGGGAGGGGAGCTGCATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGTGGTCCACGTGCAGGTaGTGTGTGTGGCTAAGGGAG +
Preference number: 5 (lower is better)
Translates to: RWGGELHWPWDAVGDSDVWSTCR*CVWLRE
Trigger: CTCCCTTAGCCACACACACAACCTGCACGTGGACCA...CACATCTGAATCTCCGACAGCGTCCCAGGGCCAATGCAGCTCCCCTCCCCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CAA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGGTCCTCGGCTGGGCCTaGGCCACTGCAACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWVLGWA*ATATGS
Trigger: AGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGGAC...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS TCA 90 bp TTTTCCAGGTGTCCAGCCTGTCCTCCTCTGTTCACGACAGAACCCTaGTGGCCAACCCAGCTGGCTCCACTGCCCAGCAGGCCCAGAACC +
Preference number: 5 (lower is better)
Translates to: FSRCPACPPLFTTEP*WPTQLAPLPSRPRT
Trigger: GGTTCTGGGCCTGCTGGGCAGTGGAGCCAGCTGGGTTGGCCATCAGGGTTCTGTCGTGAACAGAGGAGGACAGGCTGGACACCTGGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586500.1
ENST00000673175.1
CDS GCA 90 bp GTCTGGAATGCCCTGCTGAGCCCCGGGCTCCTGGAGAGGGTCGTCTaGTATTTCTCTGTGTTCCAGCACAACAGAGGCTTGCGGGGACAC +
Preference number: 5 (lower is better)
Translates to: VWNALLSPGLLERVV*YFSVFQHNRGLRGH
Trigger: GTGTCCCCGCAAGCCTCTGTTGTGCTGGAACACAGAGAAATAGCAGACGACCCTCTCCAGGAGCCCGGGGCTCAGCAGGGCATTCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000591439.5
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
ENST00000673129.1
CDS GCA 90 bp CCTCCCGGCTCTTCACTCAAACCACAGCGGGCCGCTCTGATGAACTaGCTCTGGTCCACGTGCAGGTTGTGTGTGTGGCTAAGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PPGSSLKPQRAALMN*LWSTCRLCVWLREV
Trigger: CACCTCCCTTAGCCACACACACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTGAGTGAAGAGCCGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS CCA 90 bp AAATTGAGAGTGGCCCGACCTCACTGGACTACCAGAGCTCTCCAGTaGGAGGGGCTTCCGCAGGGCCTCGCGCCATCTTTTCCAGGTGTC +
Preference number: 5 (lower is better)
Translates to: KLRVARPHWTTRALQ*EGLPQGLAPSFPGV
Trigger: GACACCTGGAAAAGATGGCGCGAGGCCCTGCGGAAGCCCCTCCCACTGGAGAGCTCTGGTAGTCCAGTGAGGTCGGGCCACTCTCAATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586500.1
ENST00000673175.1
CDS-3UTR CAA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGTGGCTCCTTTTCTGGTaGACGGAGGAGCCGGCAGGG +
Preference number: 5 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWWLLFW*TEEPAG
Trigger: CCCTGCCGGCTCCTCCGTCAACCAGAAAAGGAGCCA...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCATGGCTCCTTTTCTGGTaGACGGAGGAGCCGGCAGGG +
Preference number: 5 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAWLLFW*TEEPAG
Trigger: CCCTGCCGGCTCCTCCGTCAACCAGAAAAGGAGCCA...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGCACTGTCTGCCTGCGTaGGGTCCCCCAGCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVHCLPA*GPPAPW
Trigger: CCACGGAGCTGGGGGACCCAACGCAGGCAGACAGTG...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGCAGCACAACAGAGGCTaGCGGGGACACACGGAACCC +
Preference number: 5 (lower is better)
Translates to: SILEEVCGHGGWVAKETQQHNRG*RGHTEP
Trigger: GGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCTG...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGCAGCAAGGGCCCGGCTaGTTCCCCGAAGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: SILEEVCGHGGWVAKETQQQGPG*FPEGKS
Trigger: GCTCTTTCCTTCGGGGAACAAGCCGGGCCCTTGCTG...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp TTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACTCAGCAAGGGCCCGGCTaGTTCCCCGAAGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: LALGRCRRFRCEPSRLFTQQGPG*FPEGKS
Trigger: GCTCTTTCCTTCGGGGAACAAGCCGGGCCCTTGCTG...AGTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CAA 90 bp CATTGGCCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACAGCAAGGGCCCGGCTaGTTCCCCGAAGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: HWPWDAVGDSDVNPPGSSQQGPG*FPEGKS
Trigger: GCTCTTTCCTTCGGGGAACAAGCCGGGCCCTTGCTG...TGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGGCCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CAA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACAGCAAGGGCCCGGCTaGTTCCCCGAAGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGQQGPG*FPEGKS
Trigger: GCTCTTTCCTTCGGGGAACAAGCCGGGCCCTTGCTG...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAGCAACAGGGTCTCCATaGGCATGTGAGCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAATGSP*ACELGP
Trigger: GGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGC...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGAGCAACAGGGTCTCCATaGGCATGTGAGCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGATGSP*ACELGP
Trigger: GGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGC...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAACCTCACGGCCTCCTTaGTGTTGTCCATGGAAGACC +
Preference number: 5 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGTSRPP*CCPWKT
Trigger: GGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGT...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGCCCAGGCCCGCTaGAAGTCACTGGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKGAQAR*KSLGLW
Trigger: CCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCC...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCCTGGGACGCTGTCGGAGATTCAGATGTGAACCCTCCCGGCTCTTCACTCAAACCTCTCGGCTGGGCCTaGGCCACTGCAACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PWDAVGDSDVNPPGSSLKPLGWA*ATATGS
Trigger: AGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGAGG...TTTGAGTGAAGAGCCGGGAGGGTTCACATCTGAATCTCCGACAGCGTCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CAA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAGGGCCACAGAAGTCGTaGAGGACCCTCTGTCCTTAT +
Preference number: 5 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGGPQKS*RTLCPY
Trigger: ATAAGGACAGAGGGTCCTCAACGACTTCTGTGGCCC...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR CAA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGAGGCCACGCACGACGTaGGTGGCATCCTCCATCCTG +
Preference number: 5 (lower is better)
Translates to: SILEEVCGHGGWVAKETQRPRTT*VASSIL
Trigger: CAGGATGGAGGATGCCACCAACGTCGTGCGTGGCCT...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CAA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGAAGGCCACGCACGACGTaGGTGGCATCCTCCATCCTG +
Preference number: 5 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGRPRTT*VASSIL
Trigger: CAGGATGGAGGATGCCACCAACGTCGTGCGTGGCCT...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAATCAGCCGGTTCAGGTaGGAGAGCTCAACGATGAGG +
Preference number: 5 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTISRFR*ESSTMR
Trigger: CCTCATCGTTGAGCTCTCCAACCTGAACCGGCTGAT...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS GCA 90 bp GTTCCTTTTGGCCACCGTCACCTGGAACCCTGTCTGTCTCAGGCTTaGTGTCATCGGCCCCTTGTTCTGACAGGTGGTCTTGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: VPFGHRHLEPCLSQA*CHRPLVLTGGLGWP
Trigger: GGGCCAGCCAAGACCACCTGTCAGAACAAGGGGCCGATGACAGCAAGCCTGAGACAGACAGGGTTCCAGGTGACGGTGGCCAAAAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS CCA 90 bp TGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTaGCCTACAACTCCCTCCAGGGTGGGTCCCCTCGAGGGATATTCC +
Preference number: 5 (lower is better)
Translates to: CGHGGWVAKETQTSK*PTTPSRVGPLEGYS
Trigger: GGAATATCCCTCGAGGGGACCCACCCTGGAGGGAGTTGTAGGCCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000346736.6
ENST00000586500.1
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673175.1
ENST00000673392.1
CDS CCA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTaGCAAAGGAAACACAGACCTCAAAGTGGCCTACAACTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: PPGASWRRSADMGAG*QRKHRPQSGLQLPP
Trigger: TGGAGGGAGTTGTAGGCCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000346736.6
ENST00000586500.1
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673175.1
ENST00000673392.1
CDS CCA 90 bp AGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTaGGTGGCAAAGGAAACACAGACCTCAAAGTGGCCTACAACTCCC +
Preference number: 5 (lower is better)
Translates to: RTPWSILEEVCGHGG*VAKETQTSKWPTTP
Trigger: GGGAGTTGTAGGCCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000346736.6
ENST00000586500.1
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673175.1
ENST00000673392.1
CDS CCA 90 bp GGCTCTTCACTCAAACCACAGCGGGCCGCTCTGATGAACTGCCTCTaGTCCACGTGCAGGTTGTGTGTGTGGCTAAGGGAGGTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: GSSLKPQRAALMNCL*STCRLCVWLREVAS
Trigger: ACTGGCCACCTCCCTTAGCCACACACACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTGAGTGAAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CAA 90 bp AGGTTTGTAGGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGAGGAACAGGTCCCAATTaGCCCTCTGGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: RFVGSTRTPWSILEEVCGGTGPN*PSGSSG
Trigger: CCCTGAGGAGCCAGAGGGCAAATTGGGACCTGTTCC...TCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAGGAACAGGTCCCAATTaGCCCTCTGGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAGTGPN*PSGSSG
Trigger: CCCTGAGGAGCCAGAGGGCAAATTGGGACCTGTTCC...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGTGGCTCCTTTTCTGGTaGACGGAGGAGCCGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLWLLFW*TEEPAG
Trigger: CCCTGCCGGCTCCTCCGTCAACCAGAAAAGGAGCCA...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAATGGCTCCTTTTCTGGTaGACGGAGGAGCCGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQWLLFW*TEEPAG
Trigger: CCCTGCCGGCTCCTCCGTCAACCAGAAAAGGAGCCA...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGCAGCACAACAGAGGCTaGCGGGGACACACGGAACCC +
Preference number: 5 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLQHNRG*RGHTEP
Trigger: GGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCTG...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGCAGCAAGGGCCCGGCTaGTTCCCCGAAGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLQQGPG*FPEGKS
Trigger: GCTCTTTCCTTCGGGGAACAAGCCGGGCCCTTGCTG...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGGCAACAGGGTCTCCATaGGCATGTGAGCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLATGSP*ACELGP
Trigger: GGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGC...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGCAACAGGGTCTCCATaGGCATGTGAGCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQATGSP*ACELGP
Trigger: GGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGC...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCCCCTGGAGCATCTaGGAGGAGGTCTGCGGACAT +
Preference number: 5 (lower is better)
Translates to: SILEEVCGHGGWVAKETQTPWSI*EEVCGH
Trigger: ATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGT...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GGGTCCACTAGGACCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCACGGCCTCCTTTGTGTaGTCCATGGAAGACCAACTT +
Preference number: 5 (lower is better)
Translates to: GSTRTPWSILEEVCGHGGTASFV*SMEDQL
Trigger: AAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGT...GCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGTCCTAGTGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp AACCCTCCCGGCTCTTCACTCAAACCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGGTaGTGTGTGTGGCTAAGGGAG +
Preference number: 5 (lower is better)
Translates to: NPPGSSLKPQRAALMNCLWSTCR*CVWLRE
Trigger: CTCCCTTAGCCACACACACAACCTGCACGTGGACCA...GAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTGAGTGAAGAGCCGGGAGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS-3UTR CAA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGGTCCTCGGCTGGGCCTaGGCCACTGCAACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVVLGWA*ATATGS
Trigger: AGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGGAC...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAAGGCCACGCACGACGTaGGTGGCATCCTCCATCCTG +
Preference number: 5 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQRPRTT*VASSIL
Trigger: CAGGATGGAGGATGCCACCAACGTCGTGCGTGGCCT...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS GCA 90 bp ACCTGGCTCCTGCTTCTGATTGACACATGGACCTGTGTCCGGGGATaGATGACCGGAATCTCCAGCACCCATCATGGACTCTCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: TWLLLLIDTWTCVRG*MTGISSTHHGLSAP
Trigger: GGGAGCGGAGAGTCCATGATGGGTGCTGGAGATTCCGGTCATGCATCCCCGGACACAGGTCCATGTGTCAATCAGAAGCAGGAGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
CDS-3UTR CAA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACATTTTATCTTCCCCTaGAGAAATCTGCGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTHFIFP*RNLRAL
Trigger: GAGCGCGCGCAGATTTCTCAAGGGGAAGATAAAATG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346736.6
ENST00000672786.1
CDS-3UTR CAA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGTGGCTCCTTTTCTGGTaGACGGAGGAGCCGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKWLLFW*TEEPAG
Trigger: CCCTGCCGGCTCCTCCGTCAACCAGAAAAGGAGCCA...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCACTGTCTGTCTCAGGCTaGCTGTCATCGGCCCCTTGT +
Preference number: 5 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRALSVSG*LSSAPC
Trigger: ACAAGGGGCCGATGACAGCAAGCCTGAGACAGACAG...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGCAGCAAGGGCCCGGCTaGTTCCCCGAAGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKQQGPG*FPEGKS
Trigger: GCTCTTTCCTTCGGGGAACAAGCCGGGCCCTTGCTG...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACAACGGCCTCCTTTGTGTaGTCCATGGAAGACCAACTT +
Preference number: 5 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTTASFV*SMEDQL
Trigger: AAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGT...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGCTCTGCCTGGATCAGTaGGGAATAAGTCGCTTGAAT +
Preference number: 5 (lower is better)
Translates to: PPGASWRRSADMGAGWQRLCLDQ*GISRLN
Trigger: ATTCAAGCGACTTATTCCCAACTGATCCAGGCAGAG...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS GCA 90 bp AGAGGGTCGTCTGCTATTTCTCTGTGTTCCAGCACAACAGAGGCTTaGGGGGACACACGGAACCCCTCGAGGTCTCGTTCGAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: RGSSAISLCSSTTEA*GDTRNPSRSRSRFW
Trigger: CCAGAACCTCGAACGAGACCTCGAGGGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCTGGAACACAGAGAAATAGCAGACGACCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
CDS CCA 90 bp GGCTTCCTCTTGAGCAGGACCTGGCTCCTGCTTCTGATTGACACATaGACCTGTGTCCGGGGATGCATGACCGGAATCTCCAGCACCCAT +
Preference number: 5 (lower is better)
Translates to: GFLLSRTWLLLLIDT*TCVRGCMTGISSTH
Trigger: ATGGGTGCTGGAGATTCCGGTCATGCATCCCCGGACACAGGTCCATGTGTCAATCAGAAGCAGGAGCCAGGTCCTGCTCAAGAGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
CDS CCA 90 bp TCAGGTGGGGCTTCGAAGTCAGAGGCGTCCAGGGCATCCTGTATCTaGCTGTCCAGCAGGAAGTCGAGTTCCACAGCTAAAGAGTCTGCC +
Preference number: 5 (lower is better)
Translates to: SGGASKSEASRASCI*LSSRKSSSTAKESA
Trigger: GGCAGACTCTTTAGCTGTGGAACTCGACTTCCTGCTGGACAGCCAGATACAGGATGCCCTGGACGCCTCTGACTTCGAAGCCCCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000591439.5
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
ENST00000673129.1
CDS-3UTR CAA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTACACTGTCTGCCTGCGTaGGGTCCCCCAGCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVHCLPA*GPPAPW
Trigger: CCACGGAGCTGGGGGACCCAACGCAGGCAGACAGTG...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp CCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGTCTGTCTCAGGCTaGCTGTCATCGGCCCCTTGT +
Preference number: 5 (lower is better)
Translates to: PGPHGLLCVVHGRPTSGQLSVSG*LSSAPC
Trigger: ACAAGGGGCCGATGACAGCAAGCCTGAGACAGACAG...TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACTTCAGAATCAATGCTaGGTAGGTGTTCCTTTTGGC +
Preference number: 5 (lower is better)
Translates to: GQLPGAQARLKSLGLWETLQNQC*VGVPFG
Trigger: GCCAAAAGGAACACCTACCAAGCATTGATTCTGAAG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp TGGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACCTTCAGAATCAATGCTaGGTAGGTGTTCCTTTTGGC +
Preference number: 5 (lower is better)
Translates to: WPASWSPGPLEVTGAVGDLQNQC*VGVPFG
Trigger: GCCAAAAGGAACACCTACCAAGCATTGATTCTGAAG...GTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGACCCCCTGGAGCATCTaGGAGGAGGTCTGCGGACAT +
Preference number: 5 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKTPWSI*EEVCGH
Trigger: ATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGT...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAGGAGCCCAGGCCCGCTaGAAGTCACTGGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVGAQAR*KSLGLW
Trigger: CCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCC...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGCTGAACCATCCATACTaGGCTCAGGACCCTAAAATT +
Preference number: 5 (lower is better)
Translates to: PPGASWRRSADMGAGWQRLNHPY*AQDPKI
Trigger: AATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAG...CCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GGCCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACTGAACCATCCATACTaGGCTCAGGACCCTAAAATT +
Preference number: 5 (lower is better)
Translates to: GQLPGAQARLKSLGLWETLNHPY*AQDPKI
Trigger: AATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAG...TGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGGGGCCACAGAAGTCGTaGAGGACCCTCTGTCCTTAT +
Preference number: 5 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWGPQKS*RTLCPY
Trigger: ATAAGGACAGAGGGTCCTCAACGACTTCTGTGGCCC...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS TCA 90 bp CTAACTCGGCTTCCTCTTGAGCAGGACCTGGCTCCTGCTTCTGATTaGCACATGGACCTGTGTCCGGGGATGCATGACCGGAATCTCCAG +
Preference number: 5 (lower is better)
Translates to: LTRLPLEQDLAPASD*HMDLCPGMHDRNLQ
Trigger: CTGGAGATTCCGGTCATGCATCCCCGGACACAGGTCCATGTGTCAATCAGAAGCAGGAGCCAGGTCCTGCTCAAGAGGAAGCCGAGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
CDS-3UTR CAA 90 bp CCCTGGCCAGGTGAGGCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGAGAAGTCTCCTAGCCTaGGGTTCTTTAGGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: PWPGEARTSRPPLCCPWKRSLLA*GSLGVL
Trigger: CAAAACCCCTAAAGAACCCAAGGCTAGGAGACTTCT...CTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGCCTCACCTGGCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGCTGTCTGTCTCAGGCTaGCTGTCATCGGCCCCTTGT +
Preference number: 5 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVLSVSG*LSSAPC
Trigger: ACAAGGGGCCGATGACAGCAAGCCTGAGACAGACAG...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp CCAGCTTCCTGGAGCCCAGGCCCGCTTGAAGTCACTGGGGCTGTGGGAGACACACTTCAGAATCAATGCTaGGTAGGTGTTCCTTTTGGC +
Preference number: 5 (lower is better)
Translates to: PASWSPGPLEVTGAVGDTLQNQC*VGVPFG
Trigger: GCCAAAAGGAACACCTACCAAGCATTGATTCTGAAG...TGTGTCTCCCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCCAGGAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTCAGCAAGGGCCCGGCTaGTTCCCCGAAGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFQQGPG*FPEGKS
Trigger: GCTCTTTCCTTCGGGGAACAAGCCGGGCCCTTGCTG...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGCAACAGGGTCTCCATaGGCATGTGAGCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFATGSP*ACELGP
Trigger: GGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGC...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCACATTTTATCTTCCCCTaGAGAAATCTGCGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRAHFIFP*RNLRAL
Trigger: GAGCGCGCGCAGATTTCTCAAGGGGAAGATAAAATG...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346736.6
ENST00000672786.1
CDS-3UTR CAA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGGAACAGGTCCCAATTaGCCCTCTGGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFGTGPN*PSGSSG
Trigger: CCCTGAGGAGCCAGAGGGCAAATTGGGACCTGTTCC...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGACGGCCTCCTTTGTGTaGTCCATGGAAGACCAACTT +
Preference number: 5 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWTASFV*SMEDQL
Trigger: AAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGT...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACGGCCTCCTTTGTGTaGTCCATGGAAGACCAACTT +
Preference number: 5 (lower is better)
Translates to: SILEEVCGHGGWVAKETQTASFV*SMEDQL
Trigger: AAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGT...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGACCTCACGGCCTCCTTaGTGTTGTCCATGGAAGACC +
Preference number: 5 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVTSRPP*CCPWKT
Trigger: GGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGT...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCCCTGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGATTGGGAATAAGTCGCTaGAATTATCCGCGTTACTCT +
Preference number: 5 (lower is better)
Translates to: PLEHLGGGLRTWGLGGKGLGISR*NYPRYS
Trigger: AGAGTAACGCGGATAATTCAAGCGACTTATTCCCAA...TCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR CAA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTAAGGCCACGCACGACGTaGGTGGCATCCTCCATCCTG +
Preference number: 5 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVRPRTT*VASSIL
Trigger: CAGGATGGAGGATGCCACCAACGTCGTGCGTGGCCT...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGATCAGCCGGTTCAGGTaGGAGAGCTCAACGATGAGG +
Preference number: 5 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKISRFR*ESSTMR
Trigger: CCTCATCGTTGAGCTCTCCAACCTGAACCGGCTGAT...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS CCA 90 bp CCAATTTGCCCTCTGGCTCCTCAGGGTGATGTAAACAGCCCAACATaGAACTCTGGGGGTCCCCATAGAAGTCTCCTAGCCTTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: PICPLAPQGDVNSPT*NSGGPHRSLLALGS
Trigger: AGAACCCAAGGCTAGGAGACTTCTATGGGGACCCCCAGAGTTCCATGTTGGGCTGTTTACATCACCCTGAGGAGCCAGAGGGCAAATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAAGAAGTCTCCTAGCCTaGGGTTCTTTAGGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRARSLLA*GSLGVL
Trigger: CAAAACCCCTAAAGAACCCAAGGCTAGGAGACTTCT...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAACGGCTCGGCTGGGCCTaGGCCACTGCAACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKRLGWA*ATATGS
Trigger: AGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGCCG...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000588115.5
ENST00000672786.1
ENST00000672796.1
CDS-3UTR CAA 90 bp GAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTGGCTCTGCCTGGATCAGTaGGGAATAAGTCGCTTGAAT +
Preference number: 5 (lower is better)
Translates to: EVCGHGGWVAKETQTSKWLCLDQ*GISRLN
Trigger: ATTCAAGCGACTTATTCCCAACTGATCCAGGCAGAG...CCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS CCA 90 bp TCTGGCTTCTCCCCTTCAGAATCAATGCTTGGTAGGTGTTCCTTTTaGCCACCGTCACCTGGAACCCTGTCTGTCTCAGGCTTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: SGFSPSESMLGRCSF*PPSPGTLSVSGLLS
Trigger: TGACAGCAAGCCTGAGACAGACAGGGTTCCAGGTGACGGTGGCCAAAAGGAACACCTACCAAGCATTGATTCTGAAGGGGAGAAGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp AGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTGGCAAAGGAAACACAGCTTCAGAATCAATGCTaGGTAGGTGTTCCTTTTGGC +
Preference number: 5 (lower is better)
Translates to: SILEEVCGHGGWVAKETQLQNQC*VGVPFG
Trigger: GCCAAAAGGAACACCTACCAAGCATTGATTCTGAAG...CTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGACGGCTCGGCTGGGCCTaGGCCACTGCAACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: QILNHPYLAQDPKICKSGRLGWA*ATATGS
Trigger: AGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGCCG...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000588115.5
ENST00000672786.1
ENST00000672796.1
CDS-3UTR CAA 90 bp CCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGACGGCCTCCTTTGTGTaGTCCATGGAAGACCAACTT +
Preference number: 5 (lower is better)
Translates to: PHGLLCVVHGRPTSGQLKTASFV*SMEDQL
Trigger: AAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGT...CTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTACCTCACGGCCTCCTTaGTGTTGTCCATGGAAGACC +
Preference number: 5 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFTSRPP*CCPWKT
Trigger: GGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGT...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGAGGAGCCCAGGCCCGCTaGAAGTCACTGGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: QILNHPYLAQDPKICKSGGAQAR*KSLGLW
Trigger: CCACAGCCCCAGTGACTTCAAGCGGGCCTGGGCTCC...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GCCAGGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCACTGAACCATCCATACTaGGCTCAGGACCCTAAAATT +
Preference number: 5 (lower is better)
Translates to: ARTSRPPLCCPWKTNFRALNHPY*AQDPKI
Trigger: AATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAG...TGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTATCAGCCGGTTCAGGTaGGAGAGCTCAACGATGAGG +
Preference number: 5 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFISRFR*ESSTMR
Trigger: CCTCATCGTTGAGCTCTCCAACCTGAACCGGCTGAT...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GCTCAGGACCCTAAAATTTGCAAATCCGGACAGGATGGGCCCTGCTCAGAGGTGAGAAGTCTCCTAGCCTaGGGTTCTTTAGGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: AQDPKICKSGQDGPCSEVRSLLA*GSLGVL
Trigger: CAAAACCCCTAAAGAACCCAAGGCTAGGAGACTTCT...CACCTCTGAGCAGGGCCCATCCTGTCCGGATTTGCAAATTTTAGGGTCCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAATGGCTCCTTTTCTGGTaGACGGAGGAGCCGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKWLLFW*TEEPAG
Trigger: CCCTGCCGGCTCCTCCGTCAACCAGAAAAGGAGCCA...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS-3UTR CAA 90 bp GGACCTCACGGCCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGCTGAACCATCCATACTaGGCTCAGGACCCTAAAATT +
Preference number: 5 (lower is better)
Translates to: GPHGLLCVVHGRPTSGQLLNHPY*AQDPKI
Trigger: AATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAG...CAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGACAGCACAACAGAGGCTaGCGGGGACACACGGAACCC +
Preference number: 5 (lower is better)
Translates to: QILNHPYLAQDPKICKSGQHNRG*RGHTEP
Trigger: GGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCTG...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAACCCCCTGGAGCATCTaGGAGGAGGTCTGCGGACAT +
Preference number: 5 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKTPWSI*EEVCGH
Trigger: ATGTCCGCAGACCTCCTCCAAGATGCTCCAGGGGGT...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAACTGTCTGTCTCAGGCTaGCTGTCATCGGCCCCTTGT +
Preference number: 5 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKLSVSG*LSSAPC
Trigger: ACAAGGGGCCGATGACAGCAAGCCTGAGACAGACAG...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS-3UTR CAA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAACCTCACGGCCTCCTTaGTGTTGTCCATGGAAGACC +
Preference number: 5 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKTSRPP*CCPWKT
Trigger: GGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGT...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGAACCTCACGGCCTCCTTaGTGTTGTCCATGGAAGACC +
Preference number: 5 (lower is better)
Translates to: QILNHPYLAQDPKICKSGTSRPP*CCPWKT
Trigger: GGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGT...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTGTACTGAACCATCCATACTaGGCTCAGGACCCTAAAATT +
Preference number: 5 (lower is better)
Translates to: PLCCPWKTNFRATEGRFVLNHPY*AQDPKI
Trigger: AATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAG...TACAAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCTCCTTTGTGTTGTCCATGGAAGACCAACTTCCGGGCAACTGAAGGGAGGTTTTTGGGAATAAGTCGCTaGAATTATCCGCGTTACTCT +
Preference number: 5 (lower is better)
Translates to: PPLCCPWKTNFRATEGRFLGISR*NYPRYS
Trigger: AGAGTAACGCGGATAATTCAAGCGACTTATTCCCAA...AAACCTCCCTTCAGTTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS-3UTR CAA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGAATCAGCCGGTTCAGGTaGGAGAGCTCAACGATGAGG +
Preference number: 5 (lower is better)
Translates to: QILNHPYLAQDPKICKSGISRFR*ESSTMR
Trigger: CCTCATCGTTGAGCTCTCCAACCTGAACCGGCTGAT...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGAACGGCCTCCTTTGTGTaGTCCATGGAAGACCAACTT +
Preference number: 5 (lower is better)
Translates to: QILNHPYLAQDPKICKSGTASFV*SMEDQL
Trigger: AAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGT...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CCTCCAGGAAAGAAACAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAACTGAACCATCCATACTaGGCTCAGGACCCTAAAATT +
Preference number: 5 (lower is better)
Translates to: PPGKKQILNHPYLAQDPKLNHPY*AQDPKI
Trigger: AATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAG...TTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTGTTTCTTTCCTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS-3UTR CAA 90 bp CAAATTCTGAACCATCCATACTTGGCTCAGGACCCTAAAATTTGCAAATCCGGACTGAACCATCCATACTaGGCTCAGGACCCTAAAATT +
Preference number: 5 (lower is better)
Translates to: QILNHPYLAQDPKICKSGLNHPY*AQDPKI
Trigger: AATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAG...TCCGGATTTGCAAATTTTAGGGTCCTGAGCCAAGTATGGATGGTTCAGAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673392.1
CDS CCA 72 bp CTCCGGTGCGGCGGCGCCCGAGGCCCGAGGCGGAAGTaGGACGGCCAAGCAGGGAAGCGAGGGCTCGGGATC +
Preference number: 6 (lower is better)
Translates to: LRCGGARGPRRK*DGQAGKRGLGI
Trigger: GATCCCGAGCCCTCGCTTCCCTGCTTGGCCGTCCCACTTCCGCCTCGGGCCTCGGGCGCCGCCGCACCGGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585755.1
ENST00000671728.1
CDS GCA 72 bp GCTCGGGATCGACGGCCGCGGGGCGCCGACGAGGAGTaGAGGACTCAGGAAGGGCGAGTGCGCGGCGACAGA +
Preference number: 6 (lower is better)
Translates to: ARDRRPRGADEE*RTQEGRVRGDR
Trigger: TCTGTCGCCGCGCACTCGCCCTTCCTGAGTCCTGCACTCCTCGTCGGCGCCCCGCGGCCGTCGATCCCGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585755.1
ENST00000671728.1
CDS GCA 72 bp CTGCCGGGCACCGCCTGCACAGGGCTCTGGCTGCTCTaGTCAGGGCGGGCACTGTCTGCCTGCGTTGGGTCC +
Preference number: 6 (lower is better)
Translates to: LPGTACTGLWLL*SGRALSACVGS
Trigger: GGACCCAACGCAGGCAGACAGTGCCCGCCCTGAGCAGAGCAGCCAGAGCCCTGTGCAGGCGGTGCCCGGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS CAA 90 bp AGCCGCCCTCTCGGCTGGGCCTTGGCCACTGCAACAGGGTCTCCATaGGCATGTGAGCTGGGGCCCGGCCAGCAAGGGCCCGGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: SRPLGWALATATGSP*ACELGPGQQGPGLF
Trigger: GAACAAGCCGGGCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGAGGGCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS CCA 72 bp CGGCCTTCCTCCTGGGAGAGGCAGGTGATATGGCACTaGCCTGCCCATCGGGCCCAGCCACCTCCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: RPSSWERQVIWH*PAHRAQPPPEP
Trigger: GGGCTCTGGAGGTGGCTGGGCCCGATGGGCAGGCCAGTGCCATATCACCTGCCTCTCCCAGGAGGAAGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
CDS CAA 90 bp ATCAGCCGGCTCGGCTGGGCCTTGGCCACTGCAACAGGGTCTCCATaGGCATGTGAGCTGGGGCCCGGCCAGCAAGGGCCCGGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: ISRLGWALATATGSP*ACELGPGQQGPGLF
Trigger: GAACAAGCCGGGCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGCCGGCTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000588115.5
ENST00000672786.1
ENST00000672796.1
CDS TCA 72 bp GCCTCCATCAGCGGCCTTCCTCCTGGGAGAGGCAGGTaGTATGGCACTGGCCTGCCCATCGGGCCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: ASISGLPPGRGR*YGTGLPIGPSH
Trigger: GTGGCTGGGCCCGATGGGCAGGCCAGTGCCATATCACCTGCCTCTCCCAGGAGGAAGGCCGCTGATGGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
CDS CAA 72 bp GCATGTGAGCTGGGGCCCGGCCAGCAAGGGCCCGGCTaGTTCCCCGAAGGAAAGAGCTCTAGCAGGCGCACG +
Preference number: 6 (lower is better)
Translates to: ACELGPGQQGPG*FPEGKSSSRRT
Trigger: CGTGCGCCTGCTAGAGCTCTTTCCTTCGGGGAACAAGCCGGGCCCTTGCTGGCCGGGCCCCAGCTCACATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588115.5
ENST00000672796.1
CDS CAA 90 bp ACGAAGGTCCTCGGCTGGGCCTTGGCCACTGCAACAGGGTCTCCATaGGCATGTGAGCTGGGGCCCGGCCAGCAAGGGCCCGGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: TKVLGWALATATGSP*ACELGPGQQGPGLF
Trigger: GAACAAGCCGGGCCCTTGCTGGCCGGGCCCCAGCTCACATGCCAATGGAGACCCTGTTGCAGTGGCCAAGGCCCAGCCGAGGACCTTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673392.1
CDS TCA 72 bp CAGGCCGAGAGCCCACGTGAAGCCGGAGCCCGTCGGTaGCTGACAGACGCTCTGAACCCCACAGATGTCGCC +
Preference number: 6 (lower is better)
Translates to: QAESPREAGARR*LTDALNPTDVA
Trigger: GGCGACATCTGTGGGGTTCAGAGCGTCTGTCAGTCACCGACGGGCTCCGGCTTCACGTGGGCTCTCGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS GCA 72 bp CCCTGTCTGGAGGGTCATCAGGCTGAGAATCCCCACTaGCGGGCACCGCCTGCACAGGGCTCTGGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: PCLEGHQAENPH*RAPPAQGSGCS
Trigger: AGAGCAGCCAGAGCCCTGTGCAGGCGGTGCCCGGCAGTGGGGATTCTCAGCCTGATGACCCTCCAGACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS CCA 72 bp CATCAGCGGCCTTCCTCCTGGGAGAGGCAGGTGATATaGCACTGGCCTGCCCATCGGGCCCAGCCACCTCCA +
Preference number: 6 (lower is better)
Translates to: HQRPSSWERQVI*HWPAHRAQPPP
Trigger: TGGAGGTGGCTGGGCCCGATGGGCAGGCCAGTGCCATATCACCTGCCTCTCCCAGGAGGAAGGCCGCTGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
CDS TCA 72 bp CCGAGAAGTGAGGACTCCACAGGCCGAGAGCCCACGTaGAGCCGGAGCCCGTCGGTGACTGACAGACGCTCT +
Preference number: 6 (lower is better)
Translates to: PRSEDSTGREPT*SRSPSVTDRRS
Trigger: AGAGCGTCTGTCAGTCACCGACGGGCTCCGGCTTCACGTGGGCTCTCGGCCTGTGGAGTCCTCACTTCTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS GCA 72 bp CGACAGAACCCTGATGGCCAACCCAGCTGGCTCCACTaGCCAGCAGGCCCAGAACCCAACCGCTTCTCCCCT +
Preference number: 6 (lower is better)
Translates to: RQNPDGQPSWLH*PAGPEPNRFSP
Trigger: AGGGGAGAAGCGGTTGGGTTCTGGGCCTGCTGGGCAGTGGAGCCAGCTGGGTTGGCCATCAGGGTTCTGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586500.1
ENST00000673175.1
CDS CCA 72 bp GTGGCCCGACCTCACTGGACTACCAGAGCTCTCCAGTaGGAGGGGCTTCCGCAGGGCCTCGCGCCATCTTTT +
Preference number: 6 (lower is better)
Translates to: VARPHWTTRALQ*EGLPQGLAPSF
Trigger: AAAAGATGGCGCGAGGCCCTGCGGAAGCCCCTCCCACTGGAGAGCTCTGGTAGTCCAGTGAGGTCGGGCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586500.1
ENST00000673175.1
CDS TCA 72 bp AAGCCCCACACTGACACTACGCCGACCACCGAGAAGTaGGGACTCCACAGGCCGAGAGCCCACGTGAAGCCG +
Preference number: 6 (lower is better)
Translates to: KPHTDTTPTTEK*GLHRPRAHVKP
Trigger: CGGCTTCACGTGGGCTCTCGGCCTGTGGAGTCCTCACTTCTCGGTGGTCGGCGTAGTGTCAGTGTGGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS CCA 72 bp TTGCTGTCATCGGCCCCTTGTTCTGACAGGTGGTCTTaGCTGGCCCTCTGTGAGGCGGACAACCCCGTCCCC +
Preference number: 6 (lower is better)
Translates to: LLSSAPCSDRWS*LALCEADNPVP
Trigger: GGGGACGGGGTTGTCCGCCTCACAGAGGGCCAGCCAAGACCACCTGTCAGAACAAGGGGCCGATGACAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS CCA 72 bp CAGAACGCTGGAGGCCTCGAGTCCGGAGGTGAAAGATaGAAAGGCCTGAGGGTGGGCGCTGTAGACCCCGCT +
Preference number: 6 (lower is better)
Translates to: QNAGGLESGGER*KGLRVGAVDPA
Trigger: AGCGGGGTCTACAGCGCCCACCCTCAGGCCTTTCCATCTTTCACCTCCGGACTCGAGGCCTCCAGCGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS CAA 90 bp AGCCGGTTCAGGTTGGAGAGCTCAACGATGAGGCCACGCACGACGTaGGTGGCATCCTCCATCCTGGAGGCCTCAGAGGCCTGGATCCCC +
Preference number: 6 (lower is better)
Translates to: SRFRLESSTMRPRTT*VASSILEASEAWIP
Trigger: GGGGATCCAGGCCTCTGAGGCCTCCAGGATGGAGGATGCCACCAACGTCGTGCGTGGCCTCATCGTTGAGCTCTCCAACCTGAACCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586500.1
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673175.1
ENST00000673392.1
CDS CAA 90 bp CCACAGCGGGCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGGTaGTGTGTGTGGCTAAGGGAGGTGGCCAGTGGCACAGCAGGTACA +
Preference number: 6 (lower is better)
Translates to: PQRAALMNCLWSTCR*CVWLREVASGTAGT
Trigger: TGTACCTGCTGTGCCACTGGCCACCTCCCTTAGCCACACACACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS TCA 72 bp GCCCTCACAGAACGCTGGAGGCCTCGAGTCCGGAGGTaGAAGATGGAAAGGCCTGAGGGTGGGCGCTGTAGA +
Preference number: 6 (lower is better)
Translates to: ALTERWRPRVRR*KMERPEGGRCR
Trigger: TCTACAGCGCCCACCCTCAGGCCTTTCCATCTTTCACCTCCGGACTCGAGGCCTCCAGCGTTCTGTGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS TCA 72 bp TGTCCAGCCTGTCCTCCTCTGTTCACGACAGAACCCTaGTGGCCAACCCAGCTGGCTCCACTGCCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: CPACPPLFTTEP*WPTQLAPLPSR
Trigger: CCTGCTGGGCAGTGGAGCCAGCTGGGTTGGCCATCAGGGTTCTGTCGTGAACAGAGGAGGACAGGCTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586500.1
ENST00000673175.1
CDS GCA 72 bp GGGGAGCTGGAGACGGCCTTTCCTGGTTCCTCCCCGTaGTGCTGTGTAGAGGGAACAGGTCCCAATTTGCCC +
Preference number: 6 (lower is better)
Translates to: GELETAFPGSSP*CCVEGTGPNLP
Trigger: GGGCAAATTGGGACCTGTTCCCTCTACACAGCAGCACGGGGAGGAACCAGGAAAGGCCGTCTCCAGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS CCA 72 bp TCAGGCTTGCTGTCATCGGCCCCTTGTTCTGACAGGTaGTCTTGGCTGGCCCTCTGTGAGGCGGACAACCCC +
Preference number: 6 (lower is better)
Translates to: SGLLSSAPCSDR*SWLALCEADNP
Trigger: GGGGTTGTCCGCCTCACAGAGGGCCAGCCAAGACCACCTGTCAGAACAAGGGGCCGATGACAGCAAGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS CCA 72 bp GGGGGCTGGGTGGCAAAGGAAACACAGACCTCAAAGTaGCCTACAACTCCCTCCAGGGTGGGTCCCCTCGAG +
Preference number: 6 (lower is better)
Translates to: GGWVAKETQTSK*PTTPSRVGPLE
Trigger: CTCGAGGGGACCCACCCTGGAGGGAGTTGTAGGCCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000346736.6
ENST00000586500.1
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673175.1
ENST00000673392.1
CDS CAA 72 bp AGGTTGGAGAGCTCAACGATGAGGCCACGCACGACGTaGGTGGCATCCTCCATCCTGGAGGCCTCAGAGGCC +
Preference number: 6 (lower is better)
Translates to: RLESSTMRPRTT*VASSILEASEA
Trigger: GGCCTCTGAGGCCTCCAGGATGGAGGATGCCACCAACGTCGTGCGTGGCCTCATCGTTGAGCTCTCCAACCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586500.1
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000673175.1
ENST00000673392.1
CDS GCA 72 bp GCCCTGCTGAGCCCCGGGCTCCTGGAGAGGGTCGTCTaGTATTTCTCTGTGTTCCAGCACAACAGAGGCTTG +
Preference number: 6 (lower is better)
Translates to: ALLSPGLLERVV*YFSVFQHNRGL
Trigger: CAAGCCTCTGTTGTGCTGGAACACAGAGAAATAGCAGACGACCCTCTCCAGGAGCCCGGGGCTCAGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000591439.5
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
ENST00000673129.1
CDS CCA 72 bp CAGCAGGGAAGGAAATTGAGAGTGGCCCGACCTCACTaGACTACCAGAGCTCTCCAGTGGGAGGGGCTTCCG +
Preference number: 6 (lower is better)
Translates to: QQGRKLRVARPH*TTRALQWEGLP
Trigger: CGGAAGCCCCTCCCACTGGAGAGCTCTGGTAGTCCAGTGAGGTCGGGCCACTCTCAATTTCCTTCCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586500.1
ENST00000673175.1
CDS CAA 72 bp GCCGCTCTGATGAACTGCCTCTGGTCCACGTGCAGGTaGTGTGTGTGGCTAAGGGAGGTGGCCAGTGGCACA +
Preference number: 6 (lower is better)
Translates to: AALMNCLWSTCR*CVWLREVASGT
Trigger: TGTGCCACTGGCCACCTCCCTTAGCCACACACACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS GCA 72 bp GAGCTGGAGACGGCCTTTCCTGGTTCCTCCCCGTGCTaGTGTGTAGAGGGAACAGGTCCCAATTTGCCCTCT +
Preference number: 6 (lower is better)
Translates to: ELETAFPGSSPC*CVEGTGPNLPS
Trigger: AGAGGGCAAATTGGGACCTGTTCCCTCTACACAGCAGCACGGGGAGGAACCAGGAAAGGCCGTCTCCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS GCA 72 bp GGCCACCGTCACCTGGAACCCTGTCTGTCTCAGGCTTaGTGTCATCGGCCCCTTGTTCTGACAGGTGGTCTT +
Preference number: 6 (lower is better)
Translates to: GHRHLEPCLSQA*CHRPLVLTGGL
Trigger: AAGACCACCTGTCAGAACAAGGGGCCGATGACAGCAAGCCTGAGACAGACAGGGTTCCAGGTGACGGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS CCA 72 bp CCCAGGGTCTCCACTAGCAGCTGGCATCCTGGACTCTaGGCGCTGGACTCTGCGATTGTTTCCAGGCTAAAG +
Preference number: 6 (lower is better)
Translates to: PRVSTSSWHPGL*ALDSAIVSRLK
Trigger: CTTTAGCCTGGAAACAATCGCAGAGTCCAGCGCCCAGAGTCCAGGATGCCAGCTGCTAGTGGAGACCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS CCA 72 bp CTCAAACCACAGCGGGCCGCTCTGATGAACTGCCTCTaGTCCACGTGCAGGTTGTGTGTGTGGCTAAGGGAG +
Preference number: 6 (lower is better)
Translates to: LKPQRAALMNCL*STCRLCVWLRE
Trigger: CTCCCTTAGCCACACACACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS CAA 72 bp TGGCCACCGTCACCTGGAACCCTGTCTGTCTCAGGCTaGCTGTCATCGGCCCCTTGTTCTGACAGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: WPPSPGTLSVSG*LSSAPCSDRWS
Trigger: AGACCACCTGTCAGAACAAGGGGCCGATGACAGCAAGCCTGAGACAGACAGGGTTCCAGGTGACGGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS CAA 90 bp TGTTCCTTTTGGCCACCGTCACCTGGAACCCTGTCTGTCTCAGGCTaGCTGTCATCGGCCCCTTGTTCTGACAGGTGGTCTTGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: CSFWPPSPGTLSVSG*LSSAPCSDRWSWLA
Trigger: GGCCAGCCAAGACCACCTGTCAGAACAAGGGGCCGATGACAGCAAGCCTGAGACAGACAGGGTTCCAGGTGACGGTGGCCAAAAGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS CAA 90 bp GAGAGGGTCGTCTGCTATTTCTCTGTGTTCCAGCACAACAGAGGCTaGCGGGGACACACGGAACCCCTCGAGGTCTCGTTCGAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: ERVVCYFSVFQHNRG*RGHTEPLEVSFEVL
Trigger: CAGAACCTCGAACGAGACCTCGAGGGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCTGGAACACAGAGAAATAGCAGACGACCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
CDS CCA 72 bp TGGAGCATCTTGGAGGAGGTCTGCGGACATGGGGGCTaGGTGGCAAAGGAAACACAGACCTCAAAGTGGCCT +
Preference number: 6 (lower is better)
Translates to: WSILEEVCGHGG*VAKETQTSKWP
Trigger: AGGCCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000346736.6
ENST00000586500.1
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673175.1
ENST00000673392.1
CDS TCA 72 bp GGAACAGGTCCCAATTTGCCCTCTGGCTCCTCAGGGTaGTGTAAACAGCCCAACATGGAACTCTGGGGGTCC +
Preference number: 6 (lower is better)
Translates to: GTGPNLPSGSSG*CKQPNMELWGS
Trigger: GGACCCCCAGAGTTCCATGTTGGGCTGTTTACATCACCCTGAGGAGCCAGAGGGCAAATTGGGACCTGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS GCA 72 bp TCTGCTATTTCTCTGTGTTCCAGCACAACAGAGGCTTaGGGGGACACACGGAACCCCTCGAGGTCTCGTTCG +
Preference number: 6 (lower is better)
Translates to: SAISLCSSTTEA*GDTRNPSRSRS
Trigger: CGAACGAGACCTCGAGGGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCTGGAACACAGAGAAATAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
CDS GCA 72 bp TCTTCACTCAAACCACAGCGGGCCGCTCTGATGAACTaGCTCTGGTCCACGTGCAGGTTGTGTGTGTGGCTA +
Preference number: 6 (lower is better)
Translates to: SSLKPQRAALMN*LWSTCRLCVWL
Trigger: TAGCCACACACACAACCTGCACGTGGACCAGAGGCAGTTCATCAGAGCGGCCCGCTGTGGTTTGAGTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591439.5
ENST00000673129.1
CDS CCA 72 bp CCTCTGGCTCCTCAGGGTGATGTAAACAGCCCAACATaGAACTCTGGGGGTCCCCATAGAAGTCTCCTAGCC +
Preference number: 6 (lower is better)
Translates to: PLAPQGDVNSPT*NSGGPHRSLLA
Trigger: GGCTAGGAGACTTCTATGGGGACCCCCAGAGTTCCATGTTGGGCTGTTTACATCACCCTGAGGAGCCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000673392.1
CDS CCA 72 bp TTGAGCAGGACCTGGCTCCTGCTTCTGATTGACACATaGACCTGTGTCCGGGGATGCATGACCGGAATCTCC +
Preference number: 6 (lower is better)
Translates to: LSRTWLLLLIDT*TCVRGCMTGIS
Trigger: GGAGATTCCGGTCATGCATCCCCGGACACAGGTCCATGTGTCAATCAGAAGCAGGAGCCAGGTCCTGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
CDS CCA 72 bp GCATCTTGGAGGAGGTCTGCGGACATGGGGGCTGGGTaGCAAAGGAAACACAGACCTCAAAGTGGCCTACAA +
Preference number: 6 (lower is better)
Translates to: ASWRRSADMGAG*QRKHRPQSGLQ
Trigger: TTGTAGGCCACTTTGAGGTCTGTGTTTCCTTTGCCACCCAGCCCCCATGTCCGCAGACCTCCTCCAAGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000346736.6
ENST00000586500.1
ENST00000586783.5
ENST00000588115.5
ENST00000591586.5
ENST00000672170.1
ENST00000672786.1
ENST00000672796.1
ENST00000673175.1
ENST00000673392.1
CDS CAA 72 bp GTCTGCTATTTCTCTGTGTTCCAGCACAACAGAGGCTaGCGGGGACACACGGAACCCCTCGAGGTCTCGTTC +
Preference number: 6 (lower is better)
Translates to: VCYFSVFQHNRG*RGHTEPLEVSF
Trigger: GAACGAGACCTCGAGGGGTTCCGTGTGTCCCCGCAAGCCTCTGTTGTGCTGGAACACAGAGAAATAGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
CDS CCA 72 bp GCTTCGAAGTCAGAGGCGTCCAGGGCATCCTGTATCTaGCTGTCCAGCAGGAAGTCGAGTTCCACAGCTAAA +
Preference number: 6 (lower is better)
Translates to: ASKSEASRASCI*LSSRKSSSTAK
Trigger: TTTAGCTGTGGAACTCGACTTCCTGCTGGACAGCCAGATACAGGATGCCCTGGACGCCTCTGACTTCGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000589393.1
ENST00000591439.5
ENST00000672170.1
ENST00000672346.1
ENST00000672786.1
ENST00000673129.1
CDS CCA 72 bp TCCCCTTCAGAATCAATGCTTGGTAGGTGTTCCTTTTaGCCACCGTCACCTGGAACCCTGTCTGTCTCAGGC +
Preference number: 6 (lower is better)
Translates to: SPSESMLGRCSF*PPSPGTLSVSG
Trigger: GCCTGAGACAGACAGGGTTCCAGGTGACGGTGGCCAAAAGGAACACCTACCAAGCATTGATTCTGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346736.6
ENST00000586783.5
ENST00000672170.1
ENST00000672786.1
CDS TCA 72 bp ATCTTCCCCTTGAGAAATCTGGGCCACAGAAGTCGTTaGGGACCCTCTGTCCTTATCAGAAACGAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: IFPLRNLGHRSR*GPSVLIRNELC
Trigger: GCAGAGCTCGTTTCTGATAAGGACAGAGGGTCCTCAACGACTTCTGTGGCCCAGATTTCTCAAGGGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1
CDS CAA 72 bp TCTGTCCTTATCAGAAACGAGCTCTGCCTGGATCAGTaGGGAATAAGTCGCTTGAATTATCCGCGTTACTCT +
Preference number: 6 (lower is better)
Translates to: SVLIRNELCLDQ*GISRLNYPRYS
Trigger: AGAGTAACGCGGATAATTCAAGCGACTTATTCCCAACTGATCCAGGCAGAGCTCGTTTCTGATAAGGACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591586.5
ENST00000673392.1