RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000136492

Ensembl transcript IDs: ENST00000259008.7, ENST00000577598.5, ENST00000577913.2, ENST00000579028.1, ENST00000579028.2, ENST00000584322.2, ENST00000682066.1, ENST00000682073.1, ENST00000682369.1, ENST00000682433.1, ENST00000682453.1, ENST00000682477.1, ENST00000682589.1, ENST00000682611.1, ENST00000682755.1, ENST00000682989.1, ENST00000683039.1, ENST00000683235.1, ENST00000683381.1, ENST00000683535.1, ENST00000683672.1, ENST00000683692.1, ENST00000684471.1, ENST00000684584.1, ENST00000684626.1, ENST00000684769.1

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCCTTCCCACAACACGTCGGGATTATGGGAACTACAATTCAAGATaGGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCC +
Preference number: 1 (lower is better)
Translates to: VLPTTRRDYGNYNSR*DLAGDIAKPRHHRS
Trigger: GGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTCCCATAATCCCGACGTGTTGTGGGAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR CCA 90 bp TTCAATTACCTCCCACTGGGTCCTTCCCACAACACGTCGGGATTATaGGAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAA +
Preference number: 1 (lower is better)
Translates to: FNYLPLGPSHNTSGL*ELQFKMRSGWGHSQ
Trigger: TTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTCCCATAATCCCGACGTGTTGTGGGAAGGACCCAGTGGGAGGTAATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR CCA 90 bp AAAAGTGCTCCCACTTCATCTTGGAACTCAAATGTTTCAGTATTCTaGAAGGTAGCACAGAGATTCCGACCCTTGGGGCCTGACCCAATG +
Preference number: 1 (lower is better)
Translates to: KSAPTSSWNSNVSVF*KVAQRFRPLGPDPM
Trigger: CATTGGGTCAGGCCCCAAGGGTCGGAATCTCTGTGCTACCTTCCAGAATACTGAAACATTTGAGTTCCAAGATGAAGTGGGAGCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579028.1
3UTR CCA 90 bp AACACGTCGGGATTATGGGAACTACAATTCAAGATGAGATCTGGCTaGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTAAA +
Preference number: 1 (lower is better)
Translates to: NTSGLWELQFKMRSG*GHSQTTSPSFPKCK
Trigger: TTTACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTCCCATAATCCCGACGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR GCA 90 bp TTAGGCTTTGTGGAGCATAATGTATCTGTTGCGACTACTCAATTATaGTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGT +
Preference number: 1 (lower is better)
Translates to: LGFVEHNVSVATTQL*CSSAIHTNTQLCCC
Trigger: ACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTGAGTAGTCGCAACAGATACATTATGCTCCACAAAGCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577598.5
3UTR-3UTR GCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTCCTGGAGGTGAAGGTTaGAGTGAGCCCAGAGCACAC +
Preference number: 2 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCPGGEG*SEPRAH
Trigger: GTGTGCTCTGGGCTCACTGCAACCTTCACCTCCAGG...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR-3UTR CCA 90 bp CCTTGGCTCACAGTCTGGCACACAGATAACAAAAGTGCTCCCACTTCATCTTGGTGGGGCCTGACCCAATaGTACCAACCCAAACCTGTG +
Preference number: 2 (lower is better)
Translates to: PWLTVWHTDNKSAPTSSWWGLTQ*YQPKPV
Trigger: CACAGGTTTGGGTTGGTACCATTGGGTCAGGCCCCA...CCAAGATGAAGTGGGAGCACTTTTGTTATCTGTGTGCCAGACTGTGAGCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579028.1
3UTR-3UTR TCA 90 bp GTTTCAGTATTCTGGAAGGTAGCACAGAGATTCCGACCCTTGGGGCCTGACCCATTTGCCATTAATATCTaGAAAGGCCACAGCTGGATT +
Preference number: 2 (lower is better)
Translates to: VSVFWKVAQRFRPLGPDPFAINI*KGHSWI
Trigger: AATCCAGCTGTGGCCTTTTCAGATATTAATGGCAAA...TGGGTCAGGCCCCAAGGGTCGGAATCTCTGTGCTACCTTCCAGAATACTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579028.1
3UTR-3UTR TCA 90 bp GTTTCAGTATTCTGGAAGGTAGCACAGAGATTCCGACCCTTGGGGCCTGACCCATGTAACACCAAGTTCTaGCGAAAAGGATTTCATTGG +
Preference number: 2 (lower is better)
Translates to: VSVFWKVAQRFRPLGPDPCNTKF*RKGFHW
Trigger: CCAATGAAATCCTTTTCGTCAGAACTTGGTGTTACA...TGGGTCAGGCCCCAAGGGTCGGAATCTCTGTGCTACCTTCCAGAATACTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579028.1
3UTR CAA 90 bp TCAAATGTTTCAGTATTCTGGAAGGTAGCACAGAGATTCCGACCCTaGGGGCCTGACCCAATGGTACCAACCCAAACCTGTGAATTTTTA +
Preference number: 2 (lower is better)
Translates to: SNVSVFWKVAQRFRP*GPDPMVPTQTCEFL
Trigger: TAAAAATTCACAGGTTTGGGTTGGTACCATTGGGTCAGGCCCCAAGGGTCGGAATCTCTGTGCTACCTTCCAGAATACTGAAACATTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579028.1
3UTR-3UTR TCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTAGTCTTGGACTGATTTaGGGTAAAATCTATAGCGAA +
Preference number: 2 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCSLGLI*GKIYSE
Trigger: TTCGCTATAGATTTTACCTCAAATCAGTCCAAGACT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR-3UTR TCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTTTTCAAGACAAATGGTaGTCTCTGAAAAAGTCTTGG +
Preference number: 2 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCFQDKW*SLKKSW
Trigger: CCAAGACTTTTTCAGAGATCACCATTTGTCTTGAAA...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACATAGCGAAATATGACTaGGGTGTCACTAGATTAGAC +
Preference number: 2 (lower is better)
Translates to: MTEEASRNLQSWRKATFHIAKYD*GVTRLD
Trigger: GTCTAATCTAGTGACACCTCAGTCATATTTCGCTAT...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR-3UTR GCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACCACAAAAAGTCCCAATaGCCAGTGAATAACAGATGT +
Preference number: 2 (lower is better)
Translates to: MTEEASRNLQSWRKATFHHKKSQ*PVNNRC
Trigger: ACATCTGTTATTCACTGGGCATTGGGACTTTTTGTG...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR-3UTR GCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACGAAGGGTGTGGTGATTaGCAATATGACTTAGCAAAT +
Preference number: 2 (lower is better)
Translates to: MTEEASRNLQSWRKATFHEGCGD*QYDLAN
Trigger: ATTTGCTAAGTCATATTGGCAATCACCACACCCTTC...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACGTGAAAACAAATGGATaGAGAGAACCACCTAATATG +
Preference number: 2 (lower is better)
Translates to: MTEEASRNLQSWRKATFHVKTNG*REPPNM
Trigger: CATATTAGGTGGTTCTCTTCATCCATTTGTTTTCAC...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACACAAATGGTGATCTCTaGAAAAGTCTTGGACTGATT +
Preference number: 2 (lower is better)
Translates to: MTEEASRNLQSWRKATFHTNGDL*KSLGLI
Trigger: AATCAGTCCAAGACTTTTTCAGAGATCACCATTTGT...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR-3UTR GCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACCAGAAAGGATTACTGTaGCCTAAGGAAACATATTTT +
Preference number: 2 (lower is better)
Translates to: MTEEASRNLQSWRKATFHQKGLL*PKETYF
Trigger: AAAATATGTTTCCTTAGGGCACAGTAATCCTTTCTG...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR CAA 90 bp TATTCCAAGAATAAAGCCCTGTCTCTAACTGGTAGTTTTCCTGGTTaGCAGCCTGTGTGCTCTATATACTTTCAGTCCTTGAATAAATTC +
Preference number: 2 (lower is better)
Translates to: YSKNKALSLTGSFPG*QPVCSIYFQSLNKF
Trigger: GAATTTATTCAAGGACTGAAAGTATATAGAGCACACAGGCTGCAAACCAGGAAAACTACCAGTTAGAGACAGGGCTTTATTCTTGGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR-3UTR CCA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCCACAAAGCTAGTAAGTaGCAAAGCCAGTTAGTGGAA +
Preference number: 2 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFHKASK*QSQLVE
Trigger: TTCCACTAACTGGCTTTGCCACTTACTAGCTTTGTG...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577598.5
3UTR-3UTR CCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTCCAGAAAATATGCTCTaGTCTCCTGACAAAAGTTTG +
Preference number: 2 (lower is better)
Translates to: NAVIFIILTFTTQPEGIAPENML*SPDKSL
Trigger: CAAACTTTTGTCAGGAGACCAGAGCATATTTTCTGG...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577598.5
3UTR-3UTR GCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTGAAAACCAGAAAATATaGTCTGGTCTCCTGACAAAA +
Preference number: 2 (lower is better)
Translates to: NAVIFIILTFTTQPEGIAENQKI*SGLLTK
Trigger: TTTTGTCAGGAGACCAGAGCATATTTTCTGGTTTTC...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577598.5
3UTR CCA 72 bp CTCCCACTGGGTCCTTCCCACAACACGTCGGGATTATaGGAACTACAATTCAAGATGAGATCTGGCTGGGGA +
Preference number: 3 (lower is better)
Translates to: LPLGPSHNTSGL*ELQFKMRSGWG
Trigger: TCCCCAGCCAGATCTCATCTTGAATTGTAGTTCCCATAATCCCGACGTGTTGTGGGAAGGACCCAGTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR CCA 72 bp TGCATGACTGAGGAGGCCTCAAGAAACTTACAATCATaGCGGAAGGCAACTTTTCACAGGGCAGCAGGAGAG +
Preference number: 3 (lower is better)
Translates to: CMTEEASRNLQS*RKATFHRAAGE
Trigger: CTCTCCTGCTGCCCTGTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTAGGCAGGAGAATCACTaGAACCTGGAGGTGAAGGTT +
Preference number: 3 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCRQENH*NLEVKV
Trigger: AACCTTCACCTCCAGGTTCAAGTGATTCTCCTGCCT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR TCA 72 bp ACAACACGTCGGGATTATGGGAACTACAATTCAAGATaGGATCTGGCTGGGGACATAGCCAAACCACGTCAC +
Preference number: 3 (lower is better)
Translates to: TTRRDYGNYNSR*DLAGDIAKPRH
Trigger: GTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTCCCATAATCCCGACGTGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR CCA 72 bp GGATTATGGGAACTACAATTCAAGATGAGATCTGGCTaGGGACATAGCCAAACCACGTCACCATCGTTCCCT +
Preference number: 3 (lower is better)
Translates to: GLWELQFKMRSG*GHSQTTSPSFP
Trigger: AGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTCCCATAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR-3UTR CAA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACCTAAGGAAGACTTATTaGAGGACAGTACTTTGTATG +
Preference number: 3 (lower is better)
Translates to: MTEEASRNLQSWRKATFHLRKTY*RTVLCM
Trigger: CATACAAAGTACTGTCCTCAAATAAGTCTTCCTTAG...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR GCA 72 bp GTGGAGCATAATGTATCTGTTGCGACTACTCAATTATaGTGTTCTAGTGCAATACACACAAATACTCAACTC +
Preference number: 3 (lower is better)
Translates to: VEHNVSVATTQL*CSSAIHTNTQL
Trigger: GAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTGAGTAGTCGCAACAGATACATTATGCTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577598.5
3UTR-3UTR CAA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATAAAAGGACAAATGACTaGCTCATGATCACAAAGCTA +
Preference number: 3 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNKRTND*LMITKL
Trigger: TAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTT...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTCCGACCCTTGGGGCCTaGCCCAATGGTACCAACCCA +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCPTLGA*PNGTNP
Trigger: TGGGTTGGTACCATTGGGTCAGGCCCCAAGGGTCGG...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATTCCCCGGCCTTGTGTaGAGGACTGGGGCCGCCGTT +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPFPGLV*RTGAAV
Trigger: AACGGCGGCCCCAGTCCTGCACACAAGGCCGGGGAA...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTCCCTCTTCCTGGGGGTaGTGCTACTTCCCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCPSSWG*CYFPGL
Trigger: AAGGCCGGGGAAGTAGCAGCACCCCCAGGAAGAGGG...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTTCTTCCTGGGGGTGCTaGTACTTCCCCGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCSSWGC*YFPGLV
Trigger: CACAAGGCCGGGGAAGTAGCAGCACCCCCAGGAAGA...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCACCTTGTGTGCAGGACTaGGGCCGCCGTTACCTTTCC +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPPCVQD*GRRYLS
Trigger: GGAAAGGTAACGGCGGCCCCAGTCCTGCACACAAGG...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTCAGCACCTAGAACAGTaGCCAGGGGGTTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCQHLEQ*PGGFCG
Trigger: GCCACAGAAACCCCCTGGCCACTGTTCTAGGTGCTG...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GTGGCAAAGCCAGTTAGTGGAAAACCAGAAAATATGCTCTGGTCTCCTGACAAACCGACCCTTGGGGCCTaGCCCAATGGTACCAACCCA +
Preference number: 4 (lower is better)
Translates to: VAKPVSGKPENMLWSPDKPTLGA*PNGTNP
Trigger: TGGGTTGGTACCATTGGGTCAGGCCCCAAGGGTCGG...TTTGTCAGGAGACCAGAGCATATTTTCTGGTTTTCCACTAACTGGCTTTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR GCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCACCTGGAGGTGAAGGTTaGAGTGAGCCCAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPPGGEG*SEPRAH
Trigger: GTGTGCTCTGGGCTCACTGCAACCTTCACCTCCAGG...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTAGAGATTCCGACCCTTaGGGCCTGACCCAATGGTAC +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCRDSDP*GLTQWY
Trigger: GTACCATTGGGTCAGGCCCCAAGGGTCGGAATCTCT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAAGTCATTGGAACCCCTaGATATGCCGTCCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPSHWNP*ICRPPE
Trigger: CTCCGGAGGACGGCATATTCAGGGGTTCCAATGACT...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAGGTGGGCAGATCACTTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPGGQIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAGTGATCTGCCCACC...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp GTGGCAAAGCCAGTTAGTGGAAAACCAGAAAATATGCTCTGGTCTCCTGACAAACCACACTGGTCAGGCTaGTCTCGGACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: VAKPVSGKPENMLWSPDKPHWSG*SRTPDL
Trigger: GAGGTCAGGAGTCCGAGACCAGCCTGACCAGTGTGG...TTTGTCAGGAGACCAGAGCATATTTTCTGGTTTTCCACTAACTGGCTTTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTACGGGCATTGTCATCTaGGAAATCCAGACCCTCACT +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCTGIVI*EIQTLT
Trigger: AGTGAGGGTCTGGATTTCTCAGATGACAATGCCCGT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTAATAAAGCGGAGCCCTaGAAGAGAAGAAAGGGCACG +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCNKAEP*KRRKGT
Trigger: CGTGCCCTTTCTTCTCTTCCAGGGCTCCGCTTTATT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACTGGGGCCTGACCCAATaGTACCAACCCAAACCTGTG +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHWGLTQ*YQPKPV
Trigger: CACAGGTTTGGGTTGGTACCATTGGGTCAGGCCCCA...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTCATCTACCAAGGGCCTaGTTTAAGGCCCTGTATGCT +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCHLPRA*FKALYA
Trigger: AGCATACAGGGCCTTAAACCAGGCCCTTGGTAGATG...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTAAGATGAGATCTGGCTaGGGACATAGCCAAACCACG +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCKMRSG*GHSQTT
Trigger: CGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTAAGGAAACCGACTTCTaGGAGCAAATAAAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCKETDF*EQIKRS
Trigger: GCTCCGCTTTATTTGCTCTCAGAAGTCGGTTTCCTT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTGTTTCTTCCCCAGGCTaGCAAGTTCTTCTATATCCC +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCVSSPG*QVLLYP
Trigger: GGGATATAGAAGAACTTGTCAGCCTGGGGAAGAAAC...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAAAGGTTGAATGGTGCTaGATCTGCTGCCGTACCCAT +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPKVEWC*ICCRTH
Trigger: ATGGGTACGGCAGCAGATTCAGCACCATTCAACCTT...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTATTGACTCACAGTTCTaGATGACTGAGGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCIDSQF*MTEEAS
Trigger: TGAGGCCTCCTCAGTCATGCAGAACTGTGAGTCAAT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACTACACTGTAACTTGCTaGTTCCCGAGCACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHYTVTC*FPSTVL
Trigger: GAGGACTGTGCTCGGGAATCAGCAAGTTACAGTGTA...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCACCTGTGGTTCTACAATaGCTGTCTTCACCAACTCCA +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPPVVLQ*LSSPTP
Trigger: TGGAGTTGGTGAAGACAGTCATTGTAGAACCACAGG...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACACTCACAGTTCTGCATaGCTGAGGAGGCCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHTHSSA*LRRPQE
Trigger: TTCTTGAGGCCTCCTCAGTCATGCAGAACTGTGAGT...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAACTTACGCCCTCATCTaGTGGTTTCCCACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPTYALI*WFPTKR
Trigger: TCTCTTAGTGGGAAACCAGCAGATGAGGGCGTAAGT...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTCTATATCCCAGGCTTTaGACATCCCTTGGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCLYPRL*TSLGKS
Trigger: AGACTTTCCAAGGGATGTGCAAAGCCTGGGATATAG...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACCCCGAGCTCAGGTGTTaGCTTCGGTATTTTACCAGT +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHPELRC*LRYFTS
Trigger: ACTGGTAAAATACCGAAGGCAACACCTGAGCTCGGG...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCCAGCACCTAGAACAGTaGCCAGGGGGTTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SKRTNDLLMITKLVSGKAQHLEQ*PGGFCG
Trigger: GCCACAGAAACCCCCTGGCCACTGTTCTAGGTGCTG...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCCAGGCTGGAGTGCAATaGCGCAATCCTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SKRTNDLLMITKLVSGKAQAGVQ*RNPGSL
Trigger: CAGTGAGCCAGGATTGCGCCATTGCACTCCAGCCTG...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCACATCATAGCAAGCTGTaGCGGGTAAGCTTTATAAGG +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPHHSKL*RVSFIR
Trigger: CCTTATAAAGCTTACCCGTCACAGCTTGCTATGATG...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GTGGCAAAGCCAGTTAGTGGAAAACCAGAAAATATGCTCTGGTCTCCTGACAAATACACTGTAACTTGCTaGTTCCCGAGCACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: VAKPVSGKPENMLWSPDKYTVTC*FPSTVL
Trigger: GAGGACTGTGCTCGGGAATCAGCAAGTTACAGTGTA...TTTGTCAGGAGACCAGAGCATATTTTCTGGTTTTCCACTAACTGGCTTTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp GTGGCAAAGCCAGTTAGTGGAAAACCAGAAAATATGCTCTGGTCTCCTGACAAAAAGGTTGAATGGTGCTaGATCTGCTGCCGTACCCAT +
Preference number: 4 (lower is better)
Translates to: VAKPVSGKPENMLWSPDKKVEWC*ICCRTH
Trigger: ATGGGTACGGCAGCAGATTCAGCACCATTCAACCTT...TTTGTCAGGAGACCAGAGCATATTTTCTGGTTTTCCACTAACTGGCTTTGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTGGAAAGAGGTTTAATTaGCTCACAGTTCTGCATGAC +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCGKRFN*LTVLHD
Trigger: GTCATGCAGAACTGTGAGTCAATTAAACCTCTTTCC...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTCATCTTGGTCAGTCATaGTCTGAGGAGAATATACAC +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCHLGQS*SEENIH
Trigger: GTGTATATTCTCCTCAGATCATGACTGACCAAGATG...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCACTCCTGACCTCGGATaGTCCACCCGCCTTGGATAT +
Preference number: 4 (lower is better)
Translates to: SKRTNDLLMITKLVSGKATPDLG*STRLGY
Trigger: ATATCCAAGGCGGGTGGATCATCCGAGGTCAGGAGT...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR GCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTACCAACTCCAGATTATaGCATAAACCAGTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCTNSRL*HKPVES
Trigger: GCTCTCTACTGGTTTATGGCATAATCTGGAGTTGGT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACTTTACCACGACAAACTaGTACCAGGAGAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHFTTTN*YQESSI
Trigger: GATGGAGCTCTCCTGGTAGCAGTTTGTCGTGGTAAA...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATTTGCCCAGGCTGGAGTaGAATGGCGCAATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNLPRLE*NGAILA
Trigger: AGCCAGGATTGCGCCATTGCACTCCAGCCTGGGCAA...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACAGATTCCTAACTGTCTaGAGGGAAACCGAAGCAACG +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHRFLTV*RETEAT
Trigger: CGTTGCTTCGGTTTCCCTCCAGACAGTTAGGAATCT...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACTACGCCCTCATCTGCTaGTTTCCCACTAAGAGATTG +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHYALIC*FPTKRL
Trigger: CAATCTCTTAGTGGGAAACCAGCAGATGAGGGCGTA...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTAAACACAAAATTCCTTaGCTCACAGTCTGGCACACA +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCKHKIP*LTVWHT
Trigger: TGTGTGCCAGACTGTGAGCCAAGGAATTTTGTGTTT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTGGACACTGTAGTTCCTaGACACATATCTTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCGHCSS*THIFAS
Trigger: TGAAGCAAAGATATGTGTCCAGGAACTACAGTGTCC...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCGCAGCAGGCCAAATTTaGCCCATGGGCCACAGTTTG +
Preference number: 4 (lower is better)
Translates to: SKRTNDLLMITKLVSGKAAAGQI*PMGHSL
Trigger: CAAACTGTGGCCCATGGGCCAAATTTGGCCTGCTGC...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTGCATGCACAACAACATaGCAATTGTACTTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCACTTT*QLYFSF
Trigger: AAAGCTGAAGTACAATTGTCATGTTGTTGTGCATGC...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATTTCCAGTGGAGAGTTaGGTTTTACAGTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPFPVES*VLQSFL
Trigger: CAGGAAAGACTGTAAAACTCAACTCTCCACTGGAAA...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACAGCTCTCTAGTAATCTaGGCAATCTGCTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHSSLVI*AICLCV
Trigger: CACACACAAGCAGATTGCTCAGATTACTAGAGAGCT...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATAGTCATTGGAACCCCTaGATATGCCGTCCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNSHWNP*ICRPPE
Trigger: CTCCGGAGGACGGCATATTCAGGGGTTCCAATGACT...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACGGATGGACACAAGTATaGTCCCTGCTGGAAAGAATA +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHGWTQV*SLLERI
Trigger: TATTCTTTCCAGCAGGGATCATACTTGTGTCCATCC...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GTGGCAAAGCCAGTTAGTGGAAAACCAGAAAATATGCTCTGGTCTCCTGACAAAGTTTCTTCCCCAGGCTaGCAAGTTCTTCTATATCCC +
Preference number: 4 (lower is better)
Translates to: VAKPVSGKPENMLWSPDKVSSPG*QVLLYP
Trigger: GGGATATAGAAGAACTTGTCAGCCTGGGGAAGAAAC...TTTGTCAGGAGACCAGAGCATATTTTCTGGTTTTCCACTAACTGGCTTTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTATAGCGAAATATGACTaGGGTGTCACTAGATTAGAC +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCIAKYD*GVTRLD
Trigger: GTCTAATCTAGTGACACCTCAGTCATATTTCGCTAT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATGGTCAGTCATGATCTaGGGAGAATATACACCTGTT +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPWSVMI*GEYTPV
Trigger: AACAGGTGTATATTCTCCTCAGATCATGACTGACCA...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTTCCTTTGTATTTGATTaGGTCATAGTACACCTGCAG +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCSFVFD*VIVHLQ
Trigger: CTGCAGGTGTACTATGACGCAATCAAATACAAAGGA...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp GTGGCAAAGCCAGTTAGTGGAAAACCAGAAAATATGCTCTGGTCTCCTGACAAATTTACCACGACAAACTaGTACCAGGAGAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: VAKPVSGKPENMLWSPDKFTTTN*YQESSI
Trigger: GATGGAGCTCTCCTGGTAGCAGTTTGTCGTGGTAAA...TTTGTCAGGAGACCAGAGCATATTTTCTGGTTTTCCACTAACTGGCTTTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR GCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAGTAGTTTTCCTGGTTTaGAGCCTGTGTGCTCTATAT +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPVVFLV*SLCALY
Trigger: ATATAGAGCACACAGGCTGCAAACCAGGAAAACTAC...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATAGAGATTCCGACCCTTaGGGCCTGACCCAATGGTAC +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNRDSDP*GLTQWY
Trigger: GTACCATTGGGTCAGGCCCCAAGGGTCGGAATCTCT...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTTTTTTCTCCTCCCTGTaGTTCTACAATGACTGTCTT +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCFFSSL*FYNDCL
Trigger: AAGACAGTCATTGTAGAACCACAGGGAGGAGAAAAA...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTAACACGTCGGGATTATaGGAACTACAATTCAAGATG +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCNTSGL*ELQFKM
Trigger: CATCTTGAATTGTAGTTCCCATAATCCCGACGTGTT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTAGAAACTTACAATCATaGCGGAAGGCAACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCRNLQS*RKATFH
Trigger: GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATGGTGTTTCACCACACTaGTCAGGCTGGTCTCGGACT +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNGVSPH*SGWSRT
Trigger: AGTCCGAGACCAGCCTGACCAGTGTGGTGAAACACC...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACGTGTGCTTGGATAGTTaGAATGACGTGAAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHVCLDS*NDVKFL
Trigger: AAGGAACTTCACGTCATTTCAACTATCCAAGCACAC...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAGCTCGTAGGGGTTCATaGTCTTTCTTCCTTATATTA +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPARRGS*SFFLIL
Trigger: TAATATAAGGAAGAAAGATCATGAACCCCTACGAGC...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATTTGCCATTAATATCTaGAAAGGCCACAGCTGGATT +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPFAINI*KGHSWI
Trigger: AATCCAGCTGTGGCCTTTTCAGATATTAATGGCAAA...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATGTAACACCAAGTTCTaGCGAAAAGGATTTCATTGG +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPCNTKF*RKGFHW
Trigger: CCAATGAAATCCTTTTCGTCAGAACTTGGTGTTACA...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACGAATTCCTATTGTTATaGCAGCACGGGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHEFLLL*QHGHCH
Trigger: ATGACAATGCCCGTGCTGTCATAACAATAGGAATTC...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTCAAAGAATTAAAGCTTaGCCAGCTAACTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCQRIKA*PANSLC
Trigger: ACAAAGAGAGTTAGCTGGTCAAGCTTTAATTCTTTG...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAATAATGGTTTCTGATTaGGGGCATGATCCAAACGAT +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPIMVSD*GHDPND
Trigger: ATCGTTTGGATCATGCCCTCAATCAGAAACCATTAT...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACAACTACAATTCAAGATaGGATCTGGCTGGGGACATA +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHNYNSR*DLAGDI
Trigger: TATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTT...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAGACAAGTTGATGAAGTaGCATTTCTTTCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPDKLMK*HFFQKV
Trigger: CACCTTCTGAAAGAAATGGCACTTCATCAACTTGTC...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCGCAATCCTGGCTCACTaGAACCTCCACCTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFAILAH*NLHLPV
Trigger: AACTGGGAGGTGGAGGTTGCAGTGAGCCAGGATTGC...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTAATGTTTCAGTATTCTaGAAGGTAGCACAGAGATTC +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCNVSVF*KVAQRF
Trigger: GAATCTCTGTGCTACCTTCCAGAATACTGAAACATT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATAGCCTCCTGAGTAGCTaGGATTACAGACAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNSLLSS*DYRQLP
Trigger: AGGCAGCTGTCTGTAATCCCAGCTACTCAGGAGGCT...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACATATTCAGACCACATTaGAGACATAGTGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHIFRPH*RHSAFL
Trigger: CAGGAAAGCACTATGTCTTCAATGTGGTCTGAATAT...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACATAGTTGAAATGACGTaGAGTTCCTTGGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHIVEMT*SSLVHV
Trigger: GACATGAACCAAGGAACTTCACGTCATTTCAACTAT...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GTGGCAAAGCCAGTTAGTGGAAAACCAGAAAATATGCTCTGGTCTCCTGACAAAGTGTGCTTGGATAGTTaGAATGACGTGAAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: VAKPVSGKPENMLWSPDKVCLDS*NDVKFL
Trigger: AAGGAACTTCACGTCATTTCAACTATCCAAGCACAC...TTTGTCAGGAGACCAGAGCATATTTTCTGGTTTTCCACTAACTGGCTTTGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACTCTGTTCCAAAGCAATaGCGTTTTCTAATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHSVPKQ*RFLICC
Trigger: ACAGCAGATTAGAAAACGTCATTGCTTTGGAACAGA...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAGTATTCGATGACTCTTaGCTGTTTCCTTGTTTAGTA +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPVFDDS*LFPCLV
Trigger: TACTAAACAAGGAAACAGTCAAGAGTCATCGAATAC...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACCTTAATGGTATTCGATaGCTCTTGACTGTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHLNGIR*LLTVSL
Trigger: CAAGGAAACAGTCAAGAGTCATCGAATACCATTAAG...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATTGGATTTCCCTGTATaGTCCTTCTTAATGGTATTC +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPLDFPV*SFLMVF
Trigger: GAATACCATTAAGAAGGATCATACAGGGAAATCCAA...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACCAGTCCTCGATGTTATaGGCTTCATCTAAAATGACA +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHQSSML*ASSKMT
Trigger: TGTCATTTTAGATGAAGCTCATAACATCGAGGACTG...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GTGGCAAAGCCAGTTAGTGGAAAACCAGAAAATATGCTCTGGTCTCCTGACAAAGAATTCCTATTGTTATaGCAGCACGGGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: VAKPVSGKPENMLWSPDKEFLLL*QHGHCH
Trigger: ATGACAATGCCCGTGCTGTCATAACAATAGGAATTC...TTTGTCAGGAGACCAGAGCATATTTTCTGGTTTTCCACTAACTGGCTTTGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAGTGAAAACAAATGGATaGAGAGAACCACCTAATATG +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPVKTNG*REPPNM
Trigger: CATATTAGGTGGTTCTCTTCATCCATTTGTTTTCAC...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAAGTCTTGGACTGATTTaGGGTAAAATCTATAGCGAA +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPSLGLI*GKIYSE
Trigger: TTCGCTATAGATTTTACCTCAAATCAGTCCAAGACT...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAACAAATGGTGATCTCTaGAAAAGTCTTGGACTGATT +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPTNGDL*KSLGLI
Trigger: AATCAGTCCAAGACTTTTTCAGAGATCACCATTTGT...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATTTCAAGACAAATGGTaGTCTCTGAAAAAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPFQDKW*SLKKSW
Trigger: CCAAGACTTTTTCAGAGATCACCATTTGTCTTGAAA...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACCCACTAAGAGATTGTTaGCATGCTAAAGCAGAACAA +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHPLRDC*HAKAEQ
Trigger: TTGTTCTGCTTTAGCATGGCAACAATCTCTTAGTGG...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAAACAGGTACTTCTCTTaGCTCCTCTTTACCATAAAT +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPNRYFS*LLFTIN
Trigger: ATTTATGGTAAAGAGGAGGCAAGAGAAGTACCTGTT...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACTTTTTCCACTTCCTGTaGGACTCTCCAACAAACAAT +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHFFHFL*DSPTNN
Trigger: ATTGTTTGTTGGAGAGTCCCACAGGAAGTGGAAAAA...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAATTTCTTTCAGAAGGTaGTGTGCTTGGATAGTTGAA +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPISFRR*CAWIVE
Trigger: TTCAACTATCCAAGCACACCACCTTCTGAAAGAAAT...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTATATTTTGGGTATCTTaGATTTCCCTGTATGATCCT +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCIFWVS*ISLYDP
Trigger: AGGATCATACAGGGAAATCCAAGATACCCAAAATAT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTTGGGGCCTGACCCAATaGTACCAACCCAAACCTGTG +
Preference number: 4 (lower is better)
Translates to: NAVIFIILTFTTQPEGIAWGLTQ*YQPKPV
Trigger: CACAGGTTTGGGTTGGTACCATTGGGTCAGGCCCCA...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATCATCTACCAAGGGCCTaGTTTAAGGCCCTGTATGCT +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNHLPRA*FKALYA
Trigger: AGCATACAGGGCCTTAAACCAGGCCCTTGGTAGATG...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTCATTGTCCTGTATATTaGTTCTGTCCTTTATGGATA +
Preference number: 4 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCHCPVY*FCPLWI
Trigger: TATCCATAAAGGACAGAACCAATATACAGGACAATG...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
3UTR CAA 72 bp AATAAAGCCCTGTCTCTAACTGGTAGTTTTCCTGGTTaGCAGCCTGTGTGCTCTATATACTTTCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: NKALSLTGSFPG*QPVCSIYFQSL
Trigger: CAAGGACTGAAAGTATATAGAGCACACAGGCTGCAAACCAGGAAAACTACCAGTTAGAGACAGGGCTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCCATCATAGCAAGCTGTaGCGGGTAAGCTTTATAAGG +
Preference number: 4 (lower is better)
Translates to: SKRTNDLLMITKLVSGKAHHSKL*RVSFIR
Trigger: CCTTATAAAGCTTACCCGTCACAGCTTGCTATGATG...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATCCTGTGGTTCTACAATaGCTGTCTTCACCAACTCCA +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNPVVLQ*LSSPTP
Trigger: TGGAGTTGGTGAAGACAGTCATTGTAGAACCACAGG...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACGGAAAGTATTGGAGATaGAGTTGGGTAATAACACTA +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHGKYWR*SWVITL
Trigger: TAGTGTTATTACCCAACTTCATCTCCAATACTTTCC...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACCAATCTGCTTGTGTGTaGGTGTCCCAAAATATATTT +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHQSACV*VSQNIF
Trigger: AAATATATTTTGGGACACGCACACACAAGCAGATTG...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR GCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCACTTTCCAAGTTATTATaGACATATACCATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPLSKLL*TYTICV
Trigger: GACACAGATGGTATATGTGCATAATAACTTGGAAAG...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATTACGCCCTCATCTGCTaGTTTCCCACTAAGAGATTG +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNYALIC*FPTKRL
Trigger: CAATCTCTTAGTGGGAAACCAGCAGATGAGGGCGTA...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAGTTTATCTTTTCCAGTaGAGAGTTGAGTTTTACAGT +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPVYLFQ*RVEFYS
Trigger: ACTGTAAAACTCAACTCTCCACTGGAAAAGATAAAC...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACAGATATATAGCGACTTaGGTTATTCCTAAAGCGATC +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHRYIAT*VIPKAI
Trigger: GATCGCTTTAGGAATAACCCAAGTCGCTATATATCT...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACTTGTTTGTTGAAAGTTaGGCTTGTGGATCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: MTEEASRNLQSWRKATFHLFVES*ACGSGN
Trigger: ATTTCCAGATCCACAAGCCCAACTTTCAACAAACAA...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CCA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAAGTCATACCCAAGACTaGGTAATTTATAAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPSHTQD*VIYKGK
Trigger: CTTTCCTTTATAAATTACCCAGTCTTGGGTATGACT...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR TCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATAGCTCTCTAGTAATCTaGGCAATCTGCTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNSSLVI*AICLCV
Trigger: CACACACAAGCAGATTGCTCAGATTACTAGAGAGCT...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTACGGGCATTGTCATCTaGGAAATCCAGACCCTCACT +
Preference number: 4 (lower is better)
Translates to: NAVIFIILTFTTQPEGIATGIVI*EIQTLT
Trigger: AGTGAGGGTCTGGATTTCTCAGATGACAATGCCCGT...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCATAGTTGAAATGACGTaGAGTTCCTTGGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: SKRTNDLLMITKLVSGKAIVEMT*SSLVHV
Trigger: GACATGAACCAAGGAACTTCACGTCATTTCAACTAT...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCTTTGCCATTAATATCTaGAAAGGCCACAGCTGGATT +
Preference number: 4 (lower is better)
Translates to: SKRTNDLLMITKLVSGKAFAINI*KGHSWI
Trigger: AATCCAGCTGTGGCCTTTTCAGATATTAATGGCAAA...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATTATGCTCTGGTCTCCTaGCAAAAGTTTGTTCCCATT +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNYALVS*QKFVPI
Trigger: AATGGGAACAAACTTTTGTCAGGAGACCAGAGCATA...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR GCA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCCCACTAAGAGATTGTTaGCATGCTAAAGCAGAACAA +
Preference number: 4 (lower is better)
Translates to: SKRTNDLLMITKLVSGKAPLRDC*HAKAEQ
Trigger: TTGTTCTGCTTTAGCATGGCAACAATCTCTTAGTGG...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR GCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTACTTACGCCCTCATCTaGTGGTTTCCCACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: NAVIFIILTFTTQPEGIATYALI*WFPTKR
Trigger: TCTCTTAGTGGGAAACCAGCAGATGAGGGCGTAAGT...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp GTGGCAAAGCCAGTTAGTGGAAAACCAGAAAATATGCTCTGGTCTCCTGACAAAGTTTATCTTTTCCAGTaGAGAGTTGAGTTTTACAGT +
Preference number: 4 (lower is better)
Translates to: VAKPVSGKPENMLWSPDKVYLFQ*RVEFYS
Trigger: ACTGTAAAACTCAACTCTCCACTGGAAAAGATAAAC...TTTGTCAGGAGACCAGAGCATATTTTCTGGTTTTCCACTAACTGGCTTTGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCTTTTTCTCCTCCCTGTaGTTCTACAATGACTGTCTT +
Preference number: 4 (lower is better)
Translates to: SKRTNDLLMITKLVSGKAFFSSL*FYNDCL
Trigger: AAGACAGTCATTGTAGAACCACAGGGAGGAGAAAAA...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATCACAAAGCTAGTAAGTaGCAAAGCCAGTTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNHKASK*QSQLVE
Trigger: TTCCACTAACTGGCTTTGCCACTTACTAGCTTTGTG...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCTTTCCAGTGGAGAGTTaGGTTTTACAGTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFFPVES*VLQSFL
Trigger: CAGGAAAGACTGTAAAACTCAACTCTCCACTGGAAA...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTGGATGGACACAAGTATaGTCCCTGCTGGAAAGAATA +
Preference number: 4 (lower is better)
Translates to: NAVIFIILTFTTQPEGIAGWTQV*SLLERI
Trigger: TATTCTTTCCAGCAGGGATCATACTTGTGTCCATCC...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATCAGTCCTCGATGTTATaGGCTTCATCTAAAATGACA +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNQSSML*ASSKMT
Trigger: TGTCATTTTAGATGAAGCTCATAACATCGAGGACTG...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATTGTAACACCAAGTTCTaGCGAAAAGGATTTCATTGG +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNCNTKF*RKGFHW
Trigger: CCAATGAAATCCTTTTCGTCAGAACTTGGTGTTACA...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR GCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTCTATATCCCAGGCTTTaGACATCCCTTGGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: NAVIFIILTFTTQPEGIALYPRL*TSLGKS
Trigger: AGACTTTCCAAGGGATGTGCAAAGCCTGGGATATAG...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR GCA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCACCAACTCCAGATTATaGCATAAACCAGTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFTNSRL*HKPVES
Trigger: GCTCTCTACTGGTTTATGGCATAATCTGGAGTTGGT...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR GCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTCCATGGGCCACAGTTTaGCAATCTGATACAGATGAT +
Preference number: 4 (lower is better)
Translates to: NAVIFIILTFTTQPEGIAPWATV*QSDTDD
Trigger: ATCATCTGTATCAGATTGGCAAACTGTGGCCCATGG...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCTCTGTTCCAAAGCAATaGCGTTTTCTAATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFSVPKQ*RFLICC
Trigger: ACAGCAGATTAGAAAACGTCATTGCTTTGGAACAGA...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCCTTAATGGTATTCGATaGCTCTTGACTGTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFLNGIR*LLTVSL
Trigger: CAAGGAAACAGTCAAGAGTCATCGAATACCATTAAG...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR GCA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCGCGACTACTCAATTATaGTGTTCTAGTGCAATACAC +
Preference number: 4 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFATTQL*CSSAIH
Trigger: GTGTATTGCACTAGAACAGCATAATTGAGTAGTCGC...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCTTTTTCCACTTCCTGTaGGACTCTCCAACAAACAAT +
Preference number: 4 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFFFHFL*DSPTNN
Trigger: ATTGTTTGTTGGAGAGTCCCACAGGAAGTGGAAAAA...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATATTTCTTTCAGAAGGTaGTGTGCTTGGATAGTTGAA +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNISFRR*CAWIVE
Trigger: TTCAACTATCCAAGCACACCACCTTCTGAAAGAAAT...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATAATGTTTCAGTATTCTaGAAGGTAGCACAGAGATTC +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNNVSVF*KVAQRF
Trigger: GAATCTCTGTGCTACCTTCCAGAATACTGAAACATT...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTAAACACAAAATTCCTTaGCTCACAGTCTGGCACACA +
Preference number: 4 (lower is better)
Translates to: NAVIFIILTFTTQPEGIAKHKIP*LTVWHT
Trigger: TGTGTGCCAGACTGTGAGCCAAGGAATTTTGTGTTT...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCCATTGTCCTGTATATTaGTTCTGTCCTTTATGGATA +
Preference number: 4 (lower is better)
Translates to: SKRTNDLLMITKLVSGKAHCPVY*FCPLWI
Trigger: TATCCATAAAGGACAGAACCAATATACAGGACAATG...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTGGACACTGTAGTTCCTaGACACATATCTTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: NAVIFIILTFTTQPEGIAGHCSS*THIFAS
Trigger: TGAAGCAAAGATATGTGTCCAGGAACTACAGTGTCC...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCCCAGAAAATATGCTCTaGTCTCCTGACAAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFPENML*SPDKSL
Trigger: CAAACTTTTGTCAGGAGACCAGAGCATATTTTCTGG...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCATGATCCACCCGCCTTaGATATATGAATTAAAACAA +
Preference number: 4 (lower is better)
Translates to: SKRTNDLLMITKLVSGKAMIHPP*IYELKQ
Trigger: TTGTTTTAATTCATATATCCAAGGCGGGTGGATCAT...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCTTGGATTTCCCTGTATaGTCCTTCTTAATGGTATTC +
Preference number: 4 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFLDFPV*SFLMVF
Trigger: GAATACCATTAAGAAGGATCATACAGGGAAATCCAA...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTGCTCGTAGGGGTTCATaGTCTTTCTTCCTTATATTA +
Preference number: 4 (lower is better)
Translates to: NAVIFIILTFTTQPEGIAARRGS*SFFLIL
Trigger: TAATATAAGGAAGAAAGATCATGAACCCCTACGAGC...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR GCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTGACAAGTTGATGAAGTaGCATTTCTTTCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: NAVIFIILTFTTQPEGIADKLMK*HFFQKV
Trigger: CACCTTCTGAAAGAAATGGCACTTCATCAACTTGTC...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR GCA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCCAATCTGCTTGTGTGTaGGTGTCCCAAAATATATTT +
Preference number: 4 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFQSACV*VSQNIF
Trigger: AAATATATTTTGGGACACGCACACACAAGCAGATTG...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR GCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTTCCTTTGTATTTGATTaGGTCATAGTACACCTGCAG +
Preference number: 4 (lower is better)
Translates to: NAVIFIILTFTTQPEGIASFVFD*VIVHLQ
Trigger: CTGCAGGTGTACTATGACGCAATCAAATACAAAGGA...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR GCA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCGAAAACCAGAAAATATaGTCTGGTCTCCTGACAAAA +
Preference number: 4 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFENQKI*SGLLTK
Trigger: TTTTGTCAGGAGACCAGAGCATATTTTCTGGTTTTC...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATATATTTTGGGTATCTTaGATTTCCCTGTATGATCCT +
Preference number: 4 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNIFWVS*ISLYDP
Trigger: AGGATCATACAGGGAAATCCAAGATACCCAAAATAT...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR TCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTGTATTCGATGACTCTTaGCTGTTTCCTTGTTTAGTA +
Preference number: 4 (lower is better)
Translates to: NAVIFIILTFTTQPEGIAVFDDS*LFPCLV
Trigger: TACTAAACAAGGAAACAGTCAAGAGTCATCGAATAC...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR GCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTAACAGGTACTTCTCTTaGCTCCTCTTTACCATAAAT +
Preference number: 4 (lower is better)
Translates to: NAVIFIILTFTTQPEGIANRYFS*LLFTIN
Trigger: ATTTATGGTAAAGAGGAGGCAAGAGAAGTACCTGTT...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CCA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTAGATATATAGCGACTTaGGTTATTCCTAAAGCGATC +
Preference number: 4 (lower is better)
Translates to: NAVIFIILTFTTQPEGIARYIAT*VIPKAI
Trigger: GATCGCTTTAGGAATAACCCAAGTCGCTATATATCT...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS TCA 90 bp GTATCTCCCTCCTCCCCCAGCCAGTTGAGATCCCCGAGACCCTGGTaGTCCAGTCACCACCCATGGGCCCGCAGGCTGTGCAGAAGAACT +
Preference number: 5 (lower is better)
Translates to: VSPSSPSQLRSPRPW*SSHHPWARRLCRRT
Trigger: AGTTCTTCTGCACAGCCTGCGGGCCCATGGGTGGTGACTGGATCACCAGGGTCTCGGGGATCTCAACTGGCTGGGGGAGGAGGGAGATAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682589.1
CDS-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTCAGAGATTCCGACCCTaGGGGCCTGACCCAATGGTA +
Preference number: 5 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCQRFRP*GPDPMV
Trigger: TACCATTGGGTCAGGCCCCAAGGGTCGGAATCTCTG...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS CCA 90 bp AAAAGGAAAGGAAACCGACTTCTGAGAGCAAATAAAGCGGAGCCCTaGAAGAGAAGAAAGGGCACGAGCCCTTCCTCCTCCCTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: KRKGNRLLRANKAEP*KRRKGTSPSSSLFL
Trigger: CAGGAAGAGGGAGGAGGAAGGGCTCGTGCCCTTTCTTCTCTTCCAGGGCTCCGCTTTATTTGCTCTCAGAAGTCGGTTTCCTTTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259008.7
ENST00000577913.2
ENST00000682477.1
ENST00000682989.1
ENST00000683235.1
ENST00000683672.1
CDS-3UTR CAA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACGCCAAGATCGTGCCTTaGCACTCCAGCCTGAGCGAC +
Preference number: 5 (lower is better)
Translates to: MTEEASRNLQSWRKATFHAKIVP*HSSLSD
Trigger: GTCGCTCAGGCTGGAGTGCAAAGGCACGATCTTGGC...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp GTGGCAAAGCCAGTTAGTGGAAAACCAGAAAATATGCTCTGGTCTCCTGACAAACAGAGATTCCGACCCTaGGGGCCTGACCCAATGGTA +
Preference number: 5 (lower is better)
Translates to: VAKPVSGKPENMLWSPDKQRFRP*GPDPMV
Trigger: TACCATTGGGTCAGGCCCCAAGGGTCGGAATCTCTG...TTTGTCAGGAGACCAGAGCATATTTTCTGGTTTTCCACTAACTGGCTTTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp GTGGCAAAGCCAGTTAGTGGAAAACCAGAAAATATGCTCTGGTCTCCTGACAAAGGCAGCAGGCCAAATTaGGCCCATGGGCCACAGTTT +
Preference number: 5 (lower is better)
Translates to: VAKPVSGKPENMLWSPDKGSRPN*AHGPQF
Trigger: AAACTGTGGCCCATGGGCCAAATTTGGCCTGCTGCC...TTTGTCAGGAGACCAGAGCATATTTTCTGGTTTTCCACTAACTGGCTTTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS TCA 90 bp CTCGGGCTGTGTAATATGGACAGGCCTTTAGTTTCTTCCCCAGGCTaGCAAGTTCTTCTATATCCCAGGCTTTGCACATCCCTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: LGLCNMDRPLVSSPG*QVLLYPRLCTSLGK
Trigger: CTTTCCAAGGGATGTGCAAAGCCTGGGATATAGAAGAACTTGTCAGCCTGGGGAAGAAACTAAAGGCCTGTCCATATTACACAGCCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683692.1
ENST00000684584.1
CDS CCA 90 bp GATGTGATCCCATCTGTCCATTTTTGCTTTGGTTACCTGTGCTTGTaGGGTATTGCTCAAGAAGTTGTTCCCCAGACCGATGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: DVIPSVHFCFGYLCL*GIAQEVVPQTDVLE
Trigger: CTCCAGGACATCGGTCTGGGGAACAACTTCTTGAGCAATACCCCACAAGCACAGGTAACCAAAGCAAAAATGGACAGATGGGATCACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682477.1
CDS-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTCTGTTACACTGTAACTaGCTGATTCCCGAGCACAGT +
Preference number: 5 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCLLHCN*LIPEHS
Trigger: ACTGTGCTCGGGAATCAGCAAGTTACAGTGTAACAG...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTATGACAGCACGGGCATaGTCATCTGAGAAATCCAGA +
Preference number: 5 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCMTARA*SSEKSR
Trigger: TCTGGATTTCTCAGATGACAATGCCCGTGCTGTCAT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACACCCGAGCTCAGGTGTaGCCTTCGGTATTTTACCAG +
Preference number: 5 (lower is better)
Translates to: MTEEASRNLQSWRKATFHTRAQV*PSVFYQ
Trigger: CTGGTAAAATACCGAAGGCAACACCTGAGCTCGGGT...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTGGTAGTTTTCCTGGTTaGCAGCCTGTGTGCTCTATA +
Preference number: 5 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCGSFPG*QPVCSI
Trigger: TATAGAGCACACAGGCTGCAAACCAGGAAAACTACC...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS TCA 90 bp GACACAAGTATGATCCCTGCTGGAAAGAATAGTCATTGGAACCCCTaGATATGCCGTCCTCCGGAGCTCTCTAGTAATCTGAGCAATCTG +
Preference number: 5 (lower is better)
Translates to: DTSMIPAGKNSHWNP*ICRPPELSSNLSNL
Trigger: CAGATTGCTCAGATTACTAGAGAGCTCCGGAGGACGGCATATTCAGGGGTTCCAATGACTATTCTTTCCAGCAGGGATCATACTTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683692.1
ENST00000684584.1
CDS TCA 90 bp AATTCAGCCAAGGATTCCAGTGCACTTTCAAAGGTTGAATGGTGCTaGATCTGCTGCCGTACCCATTTAGAAAGTCCTACCAAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: NSAKDSSALSKVEWC*ICCRTHLESPTKGL
Trigger: CAGGCCCTTGGTAGGACTTTCTAAATGGGTACGGCAGCAGATTCAGCACCATTCAACCTTTGAAAGTGCACTGGAATCCTTGGCTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683235.1
ENST00000684626.1
CDS-3UTR CAA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCCATCTTCTCTGTTTaGAAACGGGGAGGACTAGAG +
Preference number: 5 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPSIFSV*KRGGLE
Trigger: CTCTAGTCCTCCCCGTTTCAAAACAGAGAAGATGGA...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTTCTTCACCCCACCAATaGTATATTCAGACCACATTG +
Preference number: 5 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCSSPHQ*YIQTTL
Trigger: CAATGTGGTCTGAATATACAATTGGTGGGGTGAAGA...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTTGCTCCCACTTCATCTaGGAACTCAAATGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCCSHFI*ELKCFS
Trigger: ACTGAAACATTTGAGTTCCAAGATGAAGTGGGAGCA...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACGAAACACAAAATTCCTaGGCTCACAGTCTGGCACAC +
Preference number: 5 (lower is better)
Translates to: MTEEASRNLQSWRKATFHETQNS*AHSLAH
Trigger: GTGTGCCAGACTGTGAGCCAAGGAATTTTGTGTTTC...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS CCA 90 bp AATACCAGTACCAACAGCAGTGCCATCAGTAGCACTCTACTTCAGTaGAATGCAGCACCAATGCTGTTGATGGTGACAGTAGATTTCTTG +
Preference number: 5 (lower is better)
Translates to: NTSTNSSAISSTLLQ*NAAPMLLMVTVDFL
Trigger: CAAGAAATCTACTGTCACCATCAACAGCATTGGTGCTGCATTCCACTGAAGTAGAGTGCTACTGATGGCACTGCTGTTGGTACTGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584322.2
ENST00000683381.1
CDS-3UTR CAA 90 bp GTGGCAAAGCCAGTTAGTGGAAAACCAGAAAATATGCTCTGGTCTCCTGACAAACTGTTACACTGTAACTaGCTGATTCCCGAGCACAGT +
Preference number: 5 (lower is better)
Translates to: VAKPVSGKPENMLWSPDKLLHCN*LIPEHS
Trigger: ACTGTGCTCGGGAATCAGCAAGTTACAGTGTAACAG...TTTGTCAGGAGACCAGAGCATATTTTCTGGTTTTCCACTAACTGGCTTTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTTCAAGTGTAGACTCATaGTCCTGTATATTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCSSVDS*SCILVL
Trigger: CAGAACCAATATACAGGACAATGAGTCTACACTTGA...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTCCAGTAGTTTACTTCTaGGAATATCATCTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCPVVYF*EYHLGQ
Trigger: CTGACCAAGATGATATTCCAAGAAGTAAACTACTGG...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS TCA 90 bp TCATTTCTGTTGAAGTTACCGACTACCTCAGGATGGACACAAGTATaGTCCCTGCTGGAAAGAATAGTCATTGGAACCCCTGAATATGCC +
Preference number: 5 (lower is better)
Translates to: SFLLKLPTTSGWTQV*SLLERIVIGTPEYA
Trigger: GGCATATTCAGGGGTTCCAATGACTATTCTTTCCAGCAGGGATCATACTTGTGTCCATCCTGAGGTAGTCGGTAACTTCAACAGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683692.1
ENST00000684584.1
CDS TCA 90 bp TTCCGTTTTTCCCATCTAGCAATTCCATGCACTTCTCATTTCTGTTaGAGTTACCGACTACCTCAGGATGGACACAAGTATGATCCCTGC +
Preference number: 5 (lower is better)
Translates to: FRFSHLAIPCTSHFC*SYRLPQDGHKYDPC
Trigger: GCAGGGATCATACTTGTGTCCATCCTGAGGTAGTCGGTAACTTCAACAGAAATGAGAAGTGCATGGAATTGCTAGATGGGAAAAACGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000684584.1
CDS TCA 90 bp TGGAAAAGGAATTCCTATTGTTATGACAGCACGGGCATTGTCATCTaGGAAATCCAGACCCTCACTCACTTTACCACGACAAACTGCTAC +
Preference number: 5 (lower is better)
Translates to: WKRNSYCYDSTGIVI*EIQTLTHFTTTNCY
Trigger: GTAGCAGTTTGTCGTGGTAAAGTGAGTGAGGGTCTGGATTTCTCAGATGACAATGCCCGTGCTGTCATAACAATAGGAATTCCTTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000584322.2
ENST00000682066.1
ENST00000682073.1
ENST00000682433.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683535.1
ENST00000684471.1
ENST00000684584.1
ENST00000684769.1
CDS TCA 90 bp CCATGTTTTTCCCATCTAGCAATTCCATGCACTTCTCATTTCTGTTaGAGTTACCGACTACCTCAGGATGGACACAAGTATGATCCCTGC +
Preference number: 5 (lower is better)
Translates to: PCFSHLAIPCTSHFC*SYRLPQDGHKYDPC
Trigger: GCAGGGATCATACTTGTGTCCATCCTGAGGTAGTCGGTAACTTCAACAGAAATGAGAAGTGCATGGAATTGCTAGATGGGAAAAACATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682755.1
CDS TCA 90 bp TGTCGTTTTTCCCATCTAGCAATTCCATGCACTTCTCATTTCTGTTaGAGTTACCGACTACCTCAGGATGGACACAAGTATGATCCCTGC +
Preference number: 5 (lower is better)
Translates to: CRFSHLAIPCTSHFC*SYRLPQDGHKYDPC
Trigger: GCAGGGATCATACTTGTGTCCATCCTGAGGTAGTCGGTAACTTCAACAGAAATGAGAAGTGCATGGAATTGCTAGATGGGAAAAACGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683692.1
CDS-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTAACAAACAATGTTGCTaGCTGTTTAATCCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCNKQCC*LFNPLR
Trigger: TCTCAGAGGATTAAACAGCAAGCAACATTGTTTGTT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTACTTTTGCATCCAAATaGTGTACTTCTGTTCCAAAG +
Preference number: 5 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCTFASK*CTSVPK
Trigger: CTTTGGAACAGAAGTACACAATTTGGATGCAAAAGT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATTTTCCAGTGGAGAGTaGAGTTTTACAGTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPFSSGE*SFTVFP
Trigger: AGGAAAGACTGTAAAACTCAACTCTCCACTGGAAAA...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACCACTTCTCATTTCTGTaGAAGTTACCGACTACCTCA +
Preference number: 5 (lower is better)
Translates to: MTEEASRNLQSWRKATFHHFSFL*KLPTTS
Trigger: TGAGGTAGTCGGTAACTTCAACAGAAATGAGAAGTG...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTGTGGTGATACCCATTTaGTGTAAAGTTAAGAGCATT +
Preference number: 5 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCVVIPI*CKVKSI
Trigger: AATGCTCTTAACTTTACACAAAATGGGTATCACCAC...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTACGAAAAGGATTTCATaGGTGATAATGTACCAGATG +
Preference number: 5 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCTKRIS*VIMYQM
Trigger: CATCTGGTACATTATCACCAATGAAATCCTTTTCGT...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACCTGGTGATAGATGACTaGCTGCTTCCAGTAAATAAG +
Preference number: 5 (lower is better)
Translates to: MTEEASRNLQSWRKATFHLVIDD*LLPVNK
Trigger: CTTATTTACTGGAAGCAGCAAGTCATCTATCACCAG...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAACTCTCTTTGTTTGTTaGTTGAAAGTTGGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPTLFVC*LKVGLV
Trigger: CACAAGCCCAACTTTCAACAAACAAACAAAGAGAGT...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAGCTAACTCTCTTTGTTaGTTTGTTGAAAGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPANSLC*FVESWA
Trigger: AGCCCAACTTTCAACAAACAAACAAAGAGAGTTAGC...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTCTAAGGAAGACTTATTaGAGGACAGTACTTTGTATG +
Preference number: 5 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCLRKTY*RTVLCM
Trigger: CATACAAAGTACTGTCCTCAAATAAGTCTTCCTTAG...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCATCGTTCCCTAAATGTTTAATAATGAATAACTaGCAATGTGCCAGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: MRSGWGHSQTTSPSFPKCLIMNN*QCARCS
Trigger: AGAGCACCTGGCACATTGCAAGTTATTCATTATTAA...ACATTTAGGGAACGATGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS TCA 90 bp CTTTTTGGAAAATTCAGCCAAGGATTCCAGTGCACTTTCAAAGGTTaGATGGTGCTGAATCTGCTGCCGTACCCATTTAGAAAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: LFGKFSQGFQCTFKG*MVLNLLPYPFRKSR
Trigger: TCTGGACTTTCTAAATGGGTACGGCAGCAGATTCAGCACCATTCAACCTTTGAAAGTGCACTGGAATCCTTGGCTGAATTTTCCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000682066.1
ENST00000682073.1
ENST00000682433.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000683039.1
ENST00000683535.1
ENST00000684471.1
CDS TCA 90 bp ATCAGATTCATAGAAACAGAAAGCAGAATGGTAGTTACCAGGAGCTaGGGAGAGGGGGAGAATAGAGAGCTGTTGTTTAATGGGAACAGA +
Preference number: 5 (lower is better)
Translates to: IRFIETESRMVVTRS*GEGENRELLFNGNR
Trigger: TCTGTTCCCATTAAACAACAGCTCTCTATTCTCCCCCTCTCCTCAGCTCCTGGTAACTACCATTCTGCTTTCTGTTTCTATGAATCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682589.1
CDS TCA 90 bp TTATTCTCCTGTAGATGGATATCCAGTTTTCCCGGCACCATTTATTaGAGAGACTGTCTTTCCCTCAGTGCATGTTCGTGGCACTTAATG +
Preference number: 5 (lower is better)
Translates to: LFSCRWISSFPGTIY*RDCLSLSACSWHLM
Trigger: CATTAAGTGCCACGAACATGCACTGAGGGAAAGACAGTCTCTTCAATAAATGGTGCCGGGAAAACTGGATATCCATCTACAGGAGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682477.1
CDS TCA 90 bp CTTTTTGGAAAATTCAGCCAAGGATTCCAGTGCACTTTCAAAGGTTaGATGGTGCTGAATCTGCTGCCGTACCCATTTAGAAAGTCCTAC +
Preference number: 5 (lower is better)
Translates to: LFGKFSQGFQCTFKG*MVLNLLPYPFRKSY
Trigger: GTAGGACTTTCTAAATGGGTACGGCAGCAGATTCAGCACCATTCAACCTTTGAAAGTGCACTGGAATCCTTGGCTGAATTTTCCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000683235.1
ENST00000684626.1
CDS-3UTR CAA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACCTCTTGACTGTTTCCTaGTTTAGTAGAACAACAGCA +
Preference number: 5 (lower is better)
Translates to: MTEEASRNLQSWRKATFHLLTVS*FSRTTA
Trigger: TGCTGTTGTTCTACTAAACAAGGAAACAGTCAAGAG...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAGTCCCAAAATATATTTaGGGTATCTTGGATTTCCCT +
Preference number: 5 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPVPKYI*GILDFP
Trigger: AGGGAAATCCAAGATACCCAAAATATATTTTGGGAC...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCACCAGGAGTAAGTCTGTaGAATCGCAATTTTATAATC +
Preference number: 5 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPPGVSL*NRNFII
Trigger: GATTATAAAATTGCGATTCAACAGACTTACTCCTGG...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACCCTGGACACATATCTTaGCTTCATCTTCCACAAAAT +
Preference number: 5 (lower is better)
Translates to: MTEEASRNLQSWRKATFHPGHIS*LHLPQN
Trigger: ATTTTGTGGAAGATGAAGCAAAGATATGTGTCCAGG...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp GAACTACAATTCAAGATGAGATCTGGCTGGGGACATAGCCAAACCACGTCACCAGAATTCCATTCAACTTaGTATCTATGCAATCCTCAG +
Preference number: 5 (lower is better)
Translates to: ELQFKMRSGWGHSQTTSPEFHST*YLCNPQ
Trigger: CTGAGGATTGCATAGATACAAAGTTGAATGGAATTC...TGGTGACGTGGTTTGGCTATGTCCCCAGCCAGATCTCATCTTGAATTGTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS TCA 90 bp CAACCTGTAGATCTTTCACATTTGGAAAAGGAATTCCTATTGTTATaGCAGCACGGGCATTGTCATCTGAGAAATCCAGACCCTCACTCA +
Preference number: 5 (lower is better)
Translates to: QPVDLSHLEKEFLLL*QHGHCHLRNPDPHS
Trigger: TGAGTGAGGGTCTGGATTTCTCAGATGACAATGCCCGTGCTGTCATAACAATAGGAATTCCTTTTCCAAATGTGAAAGATCTACAGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000682066.1
ENST00000682073.1
ENST00000682433.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683535.1
ENST00000684471.1
ENST00000684584.1
ENST00000684769.1
CDS TCA 90 bp CTTTTTGGAAAATTCAGCCAAGGATTCCAGTGCACTTTCAAAGGTTaGATGGTGCTGAATCTGCTGCCGTACCCATTTAGAAAGTCATGT +
Preference number: 5 (lower is better)
Translates to: LFGKFSQGFQCTFKG*MVLNLLPYPFRKSC
Trigger: ACATGACTTTCTAAATGGGTACGGCAGCAGATTCAGCACCATTCAACCTTTGAAAGTGCACTGGAATCCTTGGCTGAATTTTCCAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684769.1
CDS-3UTR CAA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATGAAACACAAAATTCCTaGGCTCACAGTCTGGCACAC +
Preference number: 5 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNETQNS*AHSLAH
Trigger: GTGTGCCAGACTGTGAGCCAAGGAATTTTGTGTTTC...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACGAAGACCTCTCAATTTaGAATGGTGGTCATTGTATT +
Preference number: 5 (lower is better)
Translates to: MTEEASRNLQSWRKATFHEDLSI*NGGHCI
Trigger: AATACAATGACCACCATTCAAAATTGAGAGGTCTTC...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS-3UTR CAA 90 bp ATGACTGAGGAGGCCTCAAGAAACTTACAATCATGGCGGAAGGCAACTTTTCACTCATTGTCCTGTATATaGGTTCTGTCCTTTATGGAT +
Preference number: 5 (lower is better)
Translates to: MTEEASRNLQSWRKATFHSLSCI*VLSFMD
Trigger: ATCCATAAAGGACAGAACCAATATACAGGACAATGA...GTGAAAAGTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCCTCCTCAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259008.7
CDS TCA 90 bp TCGTGGCACTTAATGAGGCTACAGCACACAGCTCGTAGGGGTTCATaGTCTTTCTTCCTTATATTATTGTTGACCATACTATCTAGTTCA +
Preference number: 5 (lower is better)
Translates to: SWHLMRLQHTARRGS*SFFLILLLTILSSS
Trigger: TGAACTAGATAGTATGGTCAACAATAATATAAGGAAGAAAGATCATGAACCCCTACGAGCTGTGTGCTGTAGCCTCATTAAGTGCCACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682477.1
CDS-3UTR CAA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCTCTTCACCCCACCAATaGTATATTCAGACCACATTG +
Preference number: 5 (lower is better)
Translates to: SKRTNDLLMITKLVSGKASSPHQ*YIQTTL
Trigger: CAATGTGGTCTGAATATACAATTGGTGGGGTGAAGA...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCATGACAGCACGGGCATaGTCATCTGAGAAATCCAGA +
Preference number: 5 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFMTARA*SSEKSR
Trigger: TCTGGATTTCTCAGATGACAATGCCCGTGCTGTCAT...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS TCA 90 bp TTAACTGTAGATCTTTCACATTTGGAAAAGGAATTCCTATTGTTATaGCAGCACGGGCATTGTCATCTGAGAAATCCAGACCCTCACTCA +
Preference number: 5 (lower is better)
Translates to: LTVDLSHLEKEFLLL*QHGHCHLRNPDPHS
Trigger: TGAGTGAGGGTCTGGATTTCTCAGATGACAATGCCCGTGCTGTCATAACAATAGGAATTCCTTTTCCAAATGTGAAAGATCTACAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584322.2
ENST00000683381.1
CDS-3UTR CAA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATTGCTCCCACTTCATCTaGGAACTCAAATGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNCSHFI*ELKCFS
Trigger: ACTGAAACATTTGAGTTCCAAGATGAAGTGGGAGCA...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS TCA 90 bp AGGAAAGTAAATCTTCACCCCACCAATTGTATATTCAGACCACATTaGAGACATAGTGCTTTCCTGTTTATTTCAGATTCCTGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: RKVNLHPTNCIFRPH*RHSAFLFISDSCLE
Trigger: CTCCAGACAGGAATCTGAAATAAACAGGAAAGCACTATGTCTTCAATGTGGTCTGAATATACAATTGGTGGGGTGAAGATTTACTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577913.2
ENST00000682989.1
ENST00000683235.1
CDS CCA 90 bp TCACACATTAGTAACAGAGATGTGACAGCATTGAGGACTTCTGAGTaGGTTGCTACTGTCCTTTGTATTATACTATTGTTCCTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: SHISNRDVTALRTSE*VATVLCIILLFLFC
Trigger: ACAAAAGAGGAACAATAGTATAATACAAAGGACAGTAGCAACCCACTCAGAAGTCCTCAATGCTGTCACATCTCTGTTACTAATGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683672.1
CDS-3UTR CAA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCAACAAACAATGTTGCTaGCTGTTTAATCCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: SKRTNDLLMITKLVSGKANKQCC*LFNPLR
Trigger: TCTCAGAGGATTAAACAGCAAGCAACATTGTTTGTT...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCCACTTCTCATTTCTGTaGAAGTTACCGACTACCTCA +
Preference number: 5 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFHFSFL*KLPTTS
Trigger: TGAGGTAGTCGGTAACTTCAACAGAAATGAGAAGTG...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCCCAGGAGTAAGTCTGTaGAATCGCAATTTTATAATC +
Preference number: 5 (lower is better)
Translates to: SKRTNDLLMITKLVSGKAPGVSL*NRNFII
Trigger: GATTATAAAATTGCGATTCAACAGACTTACTCCTGG...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCGAAGACCTCTCAATTTaGAATGGTGGTCATTGTATT +
Preference number: 5 (lower is better)
Translates to: SKRTNDLLMITKLVSGKAEDLSI*NGGHCI
Trigger: AATACAATGACCACCATTCAAAATTGAGAGGTCTTC...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATTCAAGTGTAGACTCATaGTCCTGTATATTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNSSVDS*SCILVL
Trigger: CAGAACCAATATACAGGACAATGAGTCTACACTTGA...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCCTGGTGATAGATGACTaGCTGCTTCCAGTAAATAAG +
Preference number: 5 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFLVIDD*LLPVNK
Trigger: CTTATTTACTGGAAGCAGCAAGTCATCTATCACCAG...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATCCTGGACACATATCTTaGCTTCATCTTCCACAAAAT +
Preference number: 5 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNPGHIS*LHLPQN
Trigger: ATTTTGTGGAAGATGAAGCAAAGATATGTGTCCAGG...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp TCAAAAAGGACAAATGACTTGCTCATGATCACAAAGCTAGTAAGTGGCAAAGCCAAAAGGACAAATGACTaGCTCATGATCACAAAGCTA +
Preference number: 5 (lower is better)
Translates to: SKRTNDLLMITKLVSGKAKRTND*LMITKL
Trigger: TAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTT...GGCTTTGCCACTTACTAGCTTTGTGATCATGAGCAAGTCATTTGTCCTTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCGGAATAGACCAGAGTTaGGCAAACCTTTTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFGIDQS*ANLFCH
Trigger: ATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCC...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS TCA 90 bp TTTCCCTTATTTGTGCATCTAGAAGATAGTTGTAGGGACAAAATATaGTGTCAGCATCTTGTATTAGTTCTCGGGCTGTGTAATATGGAC +
Preference number: 5 (lower is better)
Translates to: FPLFVHLEDSCRDKI*CQHLVLVLGLCNMD
Trigger: GTCCATATTACACAGCCCGAGAACTAATACAAGATGCTGACATCATATTTTGTCCCTACAACTATCTTCTAGATGCACAAATAAGGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683692.1
ENST00000684584.1
CDS TCA 90 bp CTGATTCCCGAGCACAGTCCTCGATGTTATGAGCTTCATCTAAAATaGCAACCTGTTCTTTCAGATTTAAATCCATACTTTCCCTTATTT +
Preference number: 5 (lower is better)
Translates to: LIPEHSPRCYELHLK*QPVLSDLNPYFPLF
Trigger: AAATAAGGGAAAGTATGGATTTAAATCTGAAAGAACAGGTTGTCATTTTAGATGAAGCTCATAACATCGAGGACTGTGCTCGGGAATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683692.1
ENST00000684584.1
CDS TCA 90 bp TCTAACCAATTAATGAGGCTACAGCACACAGCTCGTAGGGGTTCATaGTCTTTCTTCCTTATATTATTGTTGACCATACTATCTAGTTCA +
Preference number: 5 (lower is better)
Translates to: SNQLMRLQHTARRGS*SFFLILLLTILSSS
Trigger: TGAACTAGATAGTATGGTCAACAATAATATAAGGAAGAAAGATCATGAACCCCTACGAGCTGTGTGCTGTAGCCTCATTAATTGGTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682589.1
ENST00000682611.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000684584.1
CDS TCA 90 bp GTAAGGGTGGCATCAATCTTTAATGATGAAATAATGGTTTCTGATTaGGGGCATGATCCAAACGATGTGTTTACTGTCAGATTTGAGGAT +
Preference number: 5 (lower is better)
Translates to: VRVASIFNDEIMVSD*GHDPNDVFTVRFED
Trigger: ATCCTCAAATCTGACAGTAAACACATCGTTTGGATCATGCCCTCAATCAGAAACCATTATTTCATCATTAAAGATTGATGCCACCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000259008.7
ENST00000682073.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683535.1
ENST00000684584.1
ENST00000684626.1
ENST00000684769.1
CDS CCA 90 bp GAAGTCAGGAAGCATAGGTTCTATACCAGGTTTTGGTATACTGCCTaGTATGTTATCTTTGACTCAGGTATGTTATCTTTGACATATCTT +
Preference number: 5 (lower is better)
Translates to: EVRKHRFYTRFWYTA*YVIFDSGMLSLTYL
Trigger: AAGATATGTCAAAGATAACATACCTGAGTCAAAGATAACATACCAGGCAGTATACCAAAACCTGGTATAGAACCTATGCTTCCTGACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682589.1
CDS-3UTR CAA 90 bp CAATTATGCTGTTCTAGTGCAATACACACAAATACTCAACTCTGCTGTTGTTTCTTTTCCAGTGGAGAGTaGAGTTTTACAGTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: QLCCSSAIHTNTQLCCCFFSSGE*SFTVFP
Trigger: AGGAAAGACTGTAAAACTCAACTCTCCACTGGAAAA...GAAACAACAGCAGAGTTGAGTATTTGTGTGTATTGCACTAGAACAGCATAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATGTCCCAAAATATATTTaGGGTATCTTGGATTTCCCT +
Preference number: 5 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNVPKYI*GILDFP
Trigger: AGGGAAATCCAAGATACCCAAAATATATTTTGGGAC...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATGTGGTGATACCCATTTaGTGTAAAGTTAAGAGCATT +
Preference number: 5 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNVVIPI*CKVKSI
Trigger: AATGCTCTTAACTTTACACAAAATGGGTATCACCAC...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATACGAAAAGGATTTCATaGGTGATAATGTACCAGATG +
Preference number: 5 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNTKRIS*VIMYQM
Trigger: CATCTGGTACATTATCACCAATGAAATCCTTTTCGT...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS-3UTR CAA 90 bp AATGGAATAGACCAGAGTTTGGCAAACCTTTTCTGTCATAGGCCAGATAGTAATTCATTGTCCTGTATATaGGTTCTGTCCTTTATGGAT +
Preference number: 5 (lower is better)
Translates to: NGIDQSLANLFCHRPDSNSLSCI*VLSFMD
Trigger: ATCCATAAAGGACAGAACCAATATACAGGACAATGA...ATTACTATCTGGCCTATGACAGAAAAGGTTTGCCAAACTCTGGTCTATTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS TCA 90 bp CTTCGGTATTTTACCAGTAAAATACTGTCCCAAAGAATTAAAGCTTaGCCAGCTAACTCTCTTTGTTTGTTTGTTGAAAGTTGGGCTTGT +
Preference number: 5 (lower is better)
Translates to: LRYFTSKILSQRIKA*PANSLCLFVESWAC
Trigger: ACAAGCCCAACTTTCAACAAACAAACAAAGAGAGTTAGCTGGTCAAGCTTTAATTCTTTGGGACAGTATTTTACTGGTAAAATACCGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000259008.7
ENST00000682073.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683535.1
ENST00000684584.1
ENST00000684626.1
ENST00000684769.1
CDS TCA 90 bp GCACCATATGCTATTCTAGGCATGAGGGACACACATGAAAAAGACTaGCATTACATCGTAATAGGACAGACAAATAATAAACAAGTAATC +
Preference number: 5 (lower is better)
Translates to: APYAILGMRDTHEKD*HYIVIGQTNNKQVI
Trigger: GATTACTTGTTTATTATTTGTCTGTCCTATTACGATGTAATGTCAGTCTTTTTCATGTGTGTCCCTCATGCCTAGAATAGCATATGGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577913.2
ENST00000682369.1
CDS TCA 90 bp TTTACCAACTTCCCATATTTATCTGTGTCTCTAAAGAAAGCAACTTaGAAACGTGGAACATGTATTCTTCCTTCACTGCTGTTCATAGTC +
Preference number: 5 (lower is better)
Translates to: FTNFPYLSVSLKKAT*KRGTCILPSLLFIV
Trigger: GACTATGAACAGCAGTGAAGGAAGAATACATGTTCCACGTTTTCAAGTTGCTTTCTTTAGAGACACAGATAAATATGGGAAGTTGGTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682589.1
CDS-3UTR CAA 90 bp AATGCTGTGATATTTATAATTTTGACCTTTACAACCCAACCTGAAGGGATAGCTCTCTTGACTGTTTCCTaGTTTAGTAGAACAACAGCA +
Preference number: 5 (lower is better)
Translates to: NAVIFIILTFTTQPEGIALLTVS*FSRTTA
Trigger: TGCTGTTGTTCTACTAAACAAGGAAACAGTCAAGAG...AGCTATCCCTTCAGGTTGGGTTGTAAAGGTCAAAATTATAAATATCACAGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577598.5
CDS TCA 90 bp ATTATCAACTTCCCATATTTATCTGTGTCTCTAAAGAAAGCAACTTaGAAACGTGGAACATGTATTCTTCCTTCACTGCTGTTCATAGTC +
Preference number: 5 (lower is better)
Translates to: IINFPYLSVSLKKAT*KRGTCILPSLLFIV
Trigger: GACTATGAACAGCAGTGAAGGAAGAATACATGTTCCACGTTTTCAAGTTGCTTTCTTTAGAGACACAGATAAATATGGGAAGTTGATAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682611.1
CDS GCA 90 bp GAACAGAGTTTCAGTTTTTCAAGAGGAGAAAGTCTTGAGATTGGTTaGACAACAACATATACATACTTAATAAGACTGAGCTGTATACTC +
Preference number: 5 (lower is better)
Translates to: EQSFSFSRGESLEIG*TTTYTYLIRLSCIL
Trigger: GAGTATACAGCTCAGTCTTATTAAGTATGTATATGTTGTTGTGCAACCAATCTCAAGACTTTCTCCTCTTGAAAAACTGAAACTCTGTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682589.1
CDS CCA 90 bp TATACTTACATAAGACAAAATAGACTAAGTCAAATACTTGTAAGATaGCAAGAAACACAAAATTCCTTGGCTCACAGTCTGGCACACAGA +
Preference number: 5 (lower is better)
Translates to: YTYIRQNRLSQILVR*QETQNSLAHSLAHR
Trigger: TCTGTGTGCCAGACTGTGAGCCAAGGAATTTTGTGTTTCTTGCCATCTTACAAGTATTTGACTTAGTCTATTTTGTCTTATGTAAGTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682066.1
CDS TCA 72 bp TTCCTAACTGTCTGGAGGGAAACCGAAGCAACGCTCTaGGCTCCGATTCACTTTCCTCGACCCACCAGACCC +
Preference number: 6 (lower is better)
Translates to: FLTVWRETEATL*APIHFPRPTRP
Trigger: GGGTCTGGTGGGTCGAGGAAAGTGAATCGGAGCTCAGAGCGTTGCTTCGGTTTCCCTCCAGACAGTTAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682453.1
CDS TCA 72 bp CCCTTCAACCCAGGAGTTCAAGGTTATAGTGACCTATaGTCACACCCCTGCACTCTGACCTGGGTGACAGAG +
Preference number: 6 (lower is better)
Translates to: PFNPGVQGYSDL*SHPCTLTWVTE
Trigger: CTCTGTCACCCAGGTCAGAGTGCAGGGGTGTGATCATAGGTCACTATAACCTTGAACTCCTGGGTTGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682066.1
CDS TCA 72 bp CTGGAAGGTAGCACAGAGATTCCGACCCTTGGGGCCTaGCCCAATGGTACCAACCCAAACCTAGAATATGAA +
Preference number: 6 (lower is better)
Translates to: LEGSTEIPTLGA*PNGTNPNLEYE
Trigger: TTCATATTCTAGGTTTGGGTTGGTACCATTGGGTCAGGCCCCAAGGGTCGGAATCTCTGTGCTACCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682433.1
ENST00000682589.1
CDS CAA 72 bp GGGCATCCCACAACCCTCTGCTTGGGTTCAATTAATTaGGTAGAGCTGCTCACAGAACCCAGGGACACATTT +
Preference number: 6 (lower is better)
Translates to: GHPTTLCLGSIN*VELLTEPRDTF
Trigger: AAATGTGTCCCTGGGTTCTGTGAGCAGCTCTACCAAATTAATTGAACCCAAGCAGAGGGTTGTGGGATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682589.1
CDS CAA 72 bp TATCTACTGGGAGATGATAACTTCAGATCCCAGAGGTaGAGGGCTCAGTCCCCAAGACTGCCCCTGATTTCT +
Preference number: 6 (lower is better)
Translates to: YLLGDDNFRSQR*RAQSPRLPLIS
Trigger: AGAAATCAGGGGCAGTCTTGGGGACTGAGCCCTCAACCTCTGGGATCTGAAGTTATCATCTCCCAGTAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682433.1
ENST00000682589.1
CDS TCA 72 bp ATGATCCCTGCTGGAAAGAATAGTCATTGGAACCCCTaGATATGCCGTCCTCCGGAGCTCTCTAGTAATCTG +
Preference number: 6 (lower is better)
Translates to: MIPAGKNSHWNP*ICRPPELSSNL
Trigger: CAGATTACTAGAGAGCTCCGGAGGACGGCATATTCAGGGGTTCCAATGACTATTCTTTCCAGCAGGGATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683692.1
ENST00000684584.1
CDS CAA 90 bp TCAAATGTTTCAGTATTCTGGAAGGTAGCACAGAGATTCCGACCCTaGGGGCCTGACCCAATGGTACCAACCCAAACCAATAGCAGAATC +
Preference number: 6 (lower is better)
Translates to: SNVSVFWKVAQRFRP*GPDPMVPTQTNSRI
Trigger: GATTCTGCTATTGGTTTGGGTTGGTACCATTGGGTCAGGCCCCAAGGGTCGGAATCTCTGTGCTACCTTCCAGAATACTGAAACATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683535.1
CDS CAA 90 bp GTTCATCCCGAGCAAACCGAAGCTGAACTTCTGTTACACTGTAACTaGCTGATTCCCGAGCACAGTCCTCGATGTTATGAGCTTCATCTA +
Preference number: 6 (lower is better)
Translates to: VHPEQTEAELLLHCN*LIPEHSPRCYELHL
Trigger: TAGATGAAGCTCATAACATCGAGGACTGTGCTCGGGAATCAGCAAGTTACAGTGTAACAGAAGTTCAGCTTCGGTTTGCTCGGGATGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683692.1
ENST00000684584.1
CDS CAA 90 bp TCAAATGTTTCAGTATTCTGGAAGGTAGCACAGAGATTCCGACCCTaGGGGCCTGACCCAATGGTACCAACCCAAACCTTTAAAGAGGAA +
Preference number: 6 (lower is better)
Translates to: SNVSVFWKVAQRFRP*GPDPMVPTQTFKEE
Trigger: TTCCTCTTTAAAGGTTTGGGTTGGTACCATTGGGTCAGGCCCCAAGGGTCGGAATCTCTGTGCTACCTTCCAGAATACTGAAACATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682611.1
ENST00000683381.1
CDS GCA 72 bp GAAATCCAGACCCTCACTCACTTTACCACGACAAACTaGTACCAGGAGAGCTCCATCTTTCTCTCCTTTGTA +
Preference number: 6 (lower is better)
Translates to: EIQTLTHFTTTN*YQESSIFLSFV
Trigger: TACAAAGGAGAGAAAGATGGAGCTCTCCTGGTAGCAGTTTGTCGTGGTAAAGTGAGTGAGGGTCTGGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000584322.2
ENST00000682066.1
ENST00000682073.1
ENST00000682433.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683535.1
ENST00000684471.1
ENST00000684584.1
ENST00000684769.1
CDS CAA 72 bp GAGCAAACCGAAGCTGAACTTCTGTTACACTGTAACTaGCTGATTCCCGAGCACAGTCCTCGATGTTATGAG +
Preference number: 6 (lower is better)
Translates to: EQTEAELLLHCN*LIPEHSPRCYE
Trigger: CTCATAACATCGAGGACTGTGCTCGGGAATCAGCAAGTTACAGTGTAACAGAAGTTCAGCTTCGGTTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683692.1
ENST00000684584.1
CDS CAA 72 bp CCCAAGACTGCCCCTGATTTCTGTGGCCAGTCACAGTaGTTTTTACTTGCACTTCTGACTGATCAGCTAGAA +
Preference number: 6 (lower is better)
Translates to: PKTAPDFCGQSQ*FLLALLTDQLE
Trigger: TTCTAGCTGATCAGTCAGAAGTGCAAGTAAAAACAACTGTGACTGGCCACAGAAATCAGGGGCAGTCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000682433.1
ENST00000682589.1
CDS TCA 72 bp TTGAAGTTACCGACTACCTCAGGATGGACACAAGTATaGTCCCTGCTGGAAAGAATAGTCATTGGAACCCCT +
Preference number: 6 (lower is better)
Translates to: LKLPTTSGWTQV*SLLERIVIGTP
Trigger: AGGGGTTCCAATGACTATTCTTTCCAGCAGGGATCATACTTGTGTCCATCCTGAGGTAGTCGGTAACTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683692.1
ENST00000684584.1
CDS TCA 72 bp AAACCGAAGCTGAACTTCTGTTACACTGTAACTTGCTaGTTCCCGAGCACAGTCCTCGATGTTATGAGCTTC +
Preference number: 6 (lower is better)
Translates to: KPKLNFCYTVTC*FPSTVLDVMSF
Trigger: GAAGCTCATAACATCGAGGACTGTGCTCGGGAATCAGCAAGTTACAGTGTAACAGAAGTTCAGCTTCGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683692.1
ENST00000684584.1
CDS TCA 72 bp TGTAGATGGATATCCAGTTTTCCCGGCACCATTTATTaGAGAGACTGTCTTTCCCTCAGTGCATGTTCGTGG +
Preference number: 6 (lower is better)
Translates to: CRWISSFPGTIY*RDCLSLSACSW
Trigger: CCACGAACATGCACTGAGGGAAAGACAGTCTCTTCAATAAATGGTGCCGGGAAAACTGGATATCCATCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682477.1
CDS TCA 72 bp AAGGATTCCAGTGCACTTTCAAAGGTTGAATGGTGCTaGATCTGCTGCCGTACCCATTTAGAAAGTCCTACC +
Preference number: 6 (lower is better)
Translates to: KDSSALSKVEWC*ICCRTHLESPT
Trigger: GGTAGGACTTTCTAAATGGGTACGGCAGCAGATTCAGCACCATTCAACCTTTGAAAGTGCACTGGAATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683235.1
ENST00000684626.1
CDS CAA 72 bp GCCATCTCACACATTAGTAACAGAGATGTGACAGCATaGAGGACTTCTGAGTGGGTTGCTACTGTCCTTTGT +
Preference number: 6 (lower is better)
Translates to: AISHISNRDVTA*RTSEWVATVLC
Trigger: ACAAAGGACAGTAGCAACCCACTCAGAAGTCCTCAATGCTGTCACATCTCTGTTACTAATGTGTGAGATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683672.1
CDS CAA 90 bp GCCATCAGTAGCACTCTACTTCAGTGGAATGCAGCACCAATGCTGTaGATGGTGACAGTAGATTTCTTGGGTAGATGTCAACTGTTTCAT +
Preference number: 6 (lower is better)
Translates to: AISSTLLQWNAAPML*MVTVDFLGRCQLFH
Trigger: ATGAAACAGTTGACATCTACCCAAGAAATCTACTGTCACCATCAACAGCATTGGTGCTGCATTCCACTGAAGTAGAGTGCTACTGATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584322.2
ENST00000683381.1
CDS TCA 72 bp AATTCCTATTGTTATGACAGCACGGGCATTGTCATCTaGGAAATCCAGACCCTCACTCACTTTACCACGACA +
Preference number: 6 (lower is better)
Translates to: NSYCYDSTGIVI*EIQTLTHFTTT
Trigger: TGTCGTGGTAAAGTGAGTGAGGGTCTGGATTTCTCAGATGACAATGCCCGTGCTGTCATAACAATAGGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000584322.2
ENST00000682066.1
ENST00000682073.1
ENST00000682433.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683535.1
ENST00000684471.1
ENST00000684584.1
ENST00000684769.1
CDS TCA 72 bp AAGGATTCCAGTGCACTTTCAAAGGTTGAATGGTGCTaGATCTGCTGCCGTACCCATTTAGAAAGTCCAGAT +
Preference number: 6 (lower is better)
Translates to: KDSSALSKVEWC*ICCRTHLESPD
Trigger: ATCTGGACTTTCTAAATGGGTACGGCAGCAGATTCAGCACCATTCAACCTTTGAAAGTGCACTGGAATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000682066.1
ENST00000682073.1
ENST00000682433.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000683039.1
ENST00000683535.1
ENST00000684471.1
CDS TCA 72 bp AAATTCAGCCAAGGATTCCAGTGCACTTTCAAAGGTTaGATGGTGCTGAATCTGCTGCCGTACCCATTTAGA +
Preference number: 6 (lower is better)
Translates to: KFSQGFQCTFKG*MVLNLLPYPFR
Trigger: TCTAAATGGGTACGGCAGCAGATTCAGCACCATTCAACCTTTGAAAGTGCACTGGAATCCTTGGCTGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000682066.1
ENST00000682073.1
ENST00000682433.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000683039.1
ENST00000683235.1
ENST00000683535.1
ENST00000684471.1
ENST00000684626.1
ENST00000684769.1
CDS TCA 72 bp ACTTCGGGAAAGTTAGTTACCTTCTCTAAGCCACAGTaGCTGCATGTACCCCATAGGATTGTGGTAATGATT +
Preference number: 6 (lower is better)
Translates to: TSGKLVTFSKPQ*LHVPHRIVVMI
Trigger: AATCATTACCACAATCCTATGGGGTACATGCAGTCACTGTGGCTTAGAGAAGGTAACTAACTTTCCCGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682589.1
CDS TCA 72 bp AAGGATTCCAGTGCACTTTCAAAGGTTGAATGGTGCTaGATCTGCTGCCGTACCCATTTAGAAAGTCATGTA +
Preference number: 6 (lower is better)
Translates to: KDSSALSKVEWC*ICCRTHLESHV
Trigger: TACATGACTTTCTAAATGGGTACGGCAGCAGATTCAGCACCATTCAACCTTTGAAAGTGCACTGGAATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684769.1
CDS CAA 72 bp TTCCCATCTAGCAATTCCATGCACTTCTCATTTCTGTaGAAGTTACCGACTACCTCAGGATGGACACAAGTA +
Preference number: 6 (lower is better)
Translates to: FPSSNSMHFSFL*KLPTTSGWTQV
Trigger: TACTTGTGTCCATCCTGAGGTAGTCGGTAACTTCAACAGAAATGAGAAGTGCATGGAATTGCTAGATGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683692.1
ENST00000684584.1
CDS CAA 72 bp GGAAAAGGAATTCCTATTGTTATGACAGCACGGGCATaGTCATCTGAGAAATCCAGACCCTCACTCACTTTA +
Preference number: 6 (lower is better)
Translates to: GKGIPIVMTARA*SSEKSRPSLTL
Trigger: TAAAGTGAGTGAGGGTCTGGATTTCTCAGATGACAATGCCCGTGCTGTCATAACAATAGGAATTCCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000584322.2
ENST00000682066.1
ENST00000682073.1
ENST00000682433.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683535.1
ENST00000684471.1
ENST00000684584.1
ENST00000684769.1
CDS CAA 90 bp TTCACATTTGGAAAAGGAATTCCTATTGTTATGACAGCACGGGCATaGTCATCTGAGAAATCCAGACCCTCACTCACTTTACCACGACAA +
Preference number: 6 (lower is better)
Translates to: FTFGKGIPIVMTARA*SSEKSRPSLTLPRQ
Trigger: TTGTCGTGGTAAAGTGAGTGAGGGTCTGGATTTCTCAGATGACAATGCCCGTGCTGTCATAACAATAGGAATTCCTTTTCCAAATGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000584322.2
ENST00000682066.1
ENST00000682073.1
ENST00000682433.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683535.1
ENST00000684471.1
ENST00000684584.1
ENST00000684769.1
CDS CAA 90 bp ATAGTGGTTGTCCTAATTTACATTCCCACCAACAGTATACGAGGGTaGTCTTTTCTCCACATCCTTGCCAGCATTTGTTATTGCCTGTCT +
Preference number: 6 (lower is better)
Translates to: IVVVLIYIPTNSIRG*SFLHILASICYCLS
Trigger: AGACAGGCAATAACAAATGCTGGCAAGGATGTGGAGAAAAGACAACCCTCGTATACTGTTGGTGGGAATGTAAATTAGGACAACCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682477.1
CDS TCA 72 bp TGCACCATATGCTATTCTAGGCATGAGGGACACACATaGAAAAGACTGACATTACATCGTAATAGGACAGAC +
Preference number: 6 (lower is better)
Translates to: CTICYSRHEGHT*KRLTLHRNRTD
Trigger: GTCTGTCCTATTACGATGTAATGTCAGTCTTTTTCATGTGTGTCCCTCATGCCTAGAATAGCATATGGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577913.2
ENST00000682369.1
CDS CCA 72 bp CAGAACAAAGTAAGGCTAAGCTTTTTCCACTTCCTGTaGGACTCTCCAACAAACAATGTTGCTTGCTGTTTA +
Preference number: 6 (lower is better)
Translates to: QNKVRLSFFHFL*DSPTNNVACCL
Trigger: TAAACAGCAAGCAACATTGTTTGTTGGAGAGTCCCACAGGAAGTGGAAAAAGCTTAGCCTTACTTTGTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000577913.2
ENST00000584322.2
ENST00000682369.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
CDS CAA 72 bp CATACCACTGACGGCCAGGTAGAAGACCTCTCAATTTaGAATGGTGGTCATTGTATTGTCGTTTTAGTTCAA +
Preference number: 6 (lower is better)
Translates to: HTTDGQVEDLSI*NGGHCIVVLVQ
Trigger: TTGAACTAAAACGACAATACAATGACCACCATTCAAAATTGAGAGGTCTTCTACCTGGCCGTCAGTGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000682066.1
ENST00000682073.1
ENST00000682433.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683535.1
ENST00000684471.1
ENST00000684584.1
ENST00000684626.1
ENST00000684769.1
CDS CAA 72 bp GTCCTAATTTACATTCCCACCAACAGTATACGAGGGTaGTCTTTTCTCCACATCCTTGCCAGCATTTGTTAT +
Preference number: 6 (lower is better)
Translates to: VLIYIPTNSIRG*SFLHILASICY
Trigger: ATAACAAATGCTGGCAAGGATGTGGAGAAAAGACAACCCTCGTATACTGTTGGTGGGAATGTAAATTAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682477.1
CDS CAA 90 bp AAGCTTTTTCCACTTCCTGTGGGACTCTCCAACAAACAATGTTGCTaGCTGTTTAATCCTCTGAGAATAGAATTCATCATAGCAAGCTGT +
Preference number: 6 (lower is better)
Translates to: KLFPLPVGLSNKQCC*LFNPLRIEFIIASC
Trigger: ACAGCTTGCTATGATGAATTCTATTCTCAGAGGATTAAACAGCAAGCAACATTGTTTGTTGGAGAGTCCCACAGGAAGTGGAAAAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000577913.2
ENST00000584322.2
ENST00000682369.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
CDS CAA 90 bp CTTGAATTTCATACCACTGACGGCCAGGTAGAAGACCTCTCAATTTaGAATGGTGGTCATTGTATTGTCGTTTTAGTTCAACCTGTAGAT +
Preference number: 6 (lower is better)
Translates to: LEFHTTDGQVEDLSI*NGGHCIVVLVQPVD
Trigger: ATCTACAGGTTGAACTAAAACGACAATACAATGACCACCATTCAAAATTGAGAGGTCTTCTACCTGGCCGTCAGTGGTATGAAATTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000682066.1
ENST00000682073.1
ENST00000682433.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683535.1
ENST00000684471.1
ENST00000684584.1
ENST00000684769.1
CDS TCA 72 bp AACTCTGGCACATGCTACAACATAGATGATGAACTTTaGAGACATTATCTGCAACATGGACAAACCTTGAGG +
Preference number: 6 (lower is better)
Translates to: NSGTCYNIDDEL*RHYLQHGQTLR
Trigger: CCTCAAGGTTTGTCCATGTTGCAGATAATGTCTTCAAAGTTCATCATCTATGTTGTAGCATGTGCCAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682589.1
CDS GCA 72 bp CAACAGTATACGAGGGTTGTCTTTTCTCCACATCCTTaGCAGCATTTGTTATTGCCTGTCTTTTGCATAAAA +
Preference number: 6 (lower is better)
Translates to: QQYTRVVFSPHP*QHLLLPVFCIK
Trigger: TTTTATGCAAAAGACAGGCAATAACAAATGCTGGCAAGGATGTGGAGAAAAGACAACCCTCGTATACTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682477.1
CDS CCA 72 bp AGTAACAGAGATGTGACAGCATTGAGGACTTCTGAGTaGGTTGCTACTGTCCTTTGTATTATACTATTGTTC +
Preference number: 6 (lower is better)
Translates to: SNRDVTALRTSE*VATVLCIILLF
Trigger: GAACAATAGTATAATACAAAGGACAGTAGCAACCCACTCAGAAGTCCTCAATGCTGTCACATCTCTGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683672.1
CDS CAA 72 bp CCACTTCCTGTGGGACTCTCCAACAAACAATGTTGCTaGCTGTTTAATCCTCTGAGAATAGAATTCATCATA +
Preference number: 6 (lower is better)
Translates to: PLPVGLSNKQCC*LFNPLRIEFII
Trigger: TATGATGAATTCTATTCTCAGAGGATTAAACAGCAAGCAACATTGTTTGTTGGAGAGTCCCACAGGAAGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000577913.2
ENST00000584322.2
ENST00000682369.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
CDS CAA 90 bp CAGCGTTTGCTTCTAACCAACTTTGATATACTGATTTCCTTTATTTaGGGTATATATCTAGCAGTGGGATTGCTGGATCGTTTGGTAGCT +
Preference number: 6 (lower is better)
Translates to: QRLLLTNFDILISFI*GIYLAVGLLDRLVA
Trigger: AGCTACCAAACGATCCAGCAATCCCACTGCTAGATATATACCCAAAATAAAGGAAATCAGTATATCAAAGTTGGTTAGAAGCAAACGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682477.1
CDS TCA 72 bp TTCAGAAGGTGGTGTGCTTGGATAGTTGAAATGACGTaGAGTTCCTTGGTTCATGTCATTGTTTGTAAAATC +
Preference number: 6 (lower is better)
Translates to: FRRWCAWIVEMT*SSLVHVIVCKI
Trigger: GATTTTACAAACAATGACATGAACCAAGGAACTTCACGTCATTTCAACTATCCAAGCACACCACCTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000577913.2
ENST00000584322.2
ENST00000682369.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683672.1
CDS TCA 72 bp TTTGTGCATCTAGAAGATAGTTGTAGGGACAAAATATaGTGTCAGCATCTTGTATTAGTTCTCGGGCTGTGT +
Preference number: 6 (lower is better)
Translates to: FVHLEDSCRDKI*CQHLVLVLGLC
Trigger: ACACAGCCCGAGAACTAATACAAGATGCTGACATCATATTTTGTCCCTACAACTATCTTCTAGATGCACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683692.1
ENST00000684584.1
CDS TCA 72 bp TTAATGAGGCTACAGCACACAGCTCGTAGGGGTTCATaGTCTTTCTTCCTTATATTATTGTTGACCATACTA +
Preference number: 6 (lower is better)
Translates to: LMRLQHTARRGS*SFFLILLLTIL
Trigger: TAGTATGGTCAACAATAATATAAGGAAGAAAGATCATGAACCCCTACGAGCTGTGTGCTGTAGCCTCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683692.1
ENST00000684584.1
CDS TCA 72 bp AGGATCCACGGATGTAATTCAGAGACAATGACCTCTTaGAATTGCAAGCATAAGTTTCTGTACATGATTGCA +
Preference number: 6 (lower is better)
Translates to: RIHGCNSETMTS*NCKHKFLYMIA
Trigger: TGCAATCATGTACAGAAACTTATGCTTGCAATTTCAAGAGGTCATTGTCTCTGAATTACATCCGTGGATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682589.1
CDS TCA 72 bp CTTAACCTAGGATCCACGGATGTAATTCAGAGACAATaGCCTCTTGAAATTGCAAGCATAAGTTTCTGTACA +
Preference number: 6 (lower is better)
Translates to: LNLGSTDVIQRQ*PLEIASISFCT
Trigger: TGTACAGAAACTTATGCTTGCAATTTCAAGAGGTCATTGTCTCTGAATTACATCCGTGGATCCTAGGTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682589.1
CDS CAA 72 bp CCAGGTAGAAGACCTCTCAATTTTGAATGGTGGTCATaGTATTGTCGTTTTAGTTCAACCTGTAGATCTTTC +
Preference number: 6 (lower is better)
Translates to: PGRRPLNFEWWS*YCRFSSTCRSF
Trigger: GAAAGATCTACAGGTTGAACTAAAACGACAATACAATGACCACCATTCAAAATTGAGAGGTCTTCTACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000682066.1
ENST00000682073.1
ENST00000682433.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683535.1
ENST00000684471.1
ENST00000684584.1
ENST00000684769.1
CDS CAA 90 bp CTTGAATTTCATACCACTGACGGCCAGGTAGAAGACCTCTCAATTTaGAATGGTGGTCATTGTATTGTCGTTTTAGTTCAACCTAATAAT +
Preference number: 6 (lower is better)
Translates to: LEFHTTDGQVEDLSI*NGGHCIVVLVQPNN
Trigger: ATTATTAGGTTGAACTAAAACGACAATACAATGACCACCATTCAAAATTGAGAGGTCTTCTACCTGGCCGTCAGTGGTATGAAATTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684626.1
CDS TCA 72 bp AATCTTCACCCCACCAATTGTATATTCAGACCACATTaGAGACATAGTGCTTTCCTGTTTATTTCAGATTCC +
Preference number: 6 (lower is better)
Translates to: NLHPTNCIFRPH*RHSAFLFISDS
Trigger: GGAATCTGAAATAAACAGGAAAGCACTATGTCTTCAATGTGGTCTGAATATACAATTGGTGGGGTGAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000259008.7
ENST00000577913.2
ENST00000584322.2
ENST00000682369.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
CDS TCA 72 bp TTCTCAGCAGGAACACTCTGTGAATTTTTAATGATATaGTTAGCCTCCAGCTGGATAGTAAATGTAACACCA +
Preference number: 6 (lower is better)
Translates to: FSAGTLCEFLMI*LASSWIVNVTP
Trigger: TGGTGTTACATTTACTATCCAGCTGGAGGCTAATCATATCATTAAAAATTCACAGAGTGTTCCTGCTGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682611.1
CDS CCA 72 bp CCTTGGTTCATGTCATTGTTTGTAAAATCCTTTGAATaGCATGCACAACAACATGACAATTGTACTTCAGCT +
Preference number: 6 (lower is better)
Translates to: PWFMSLFVKSFE*HAQQHDNCTSA
Trigger: AGCTGAAGTACAATTGTCATGTTGTTGTGCATGCCATTCAAAGGATTTTACAAACAATGACATGAACCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000577913.2
ENST00000584322.2
ENST00000682369.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000683672.1
CDS CCA 72 bp AAGCATAGGTTCTATACCAGGTTTTGGTATACTGCCTaGTATGTTATCTTTGACTCAGGTATGTTATCTTTG +
Preference number: 6 (lower is better)
Translates to: KHRFYTRFWYTA*YVIFDSGMLSL
Trigger: CAAAGATAACATACCTGAGTCAAAGATAACATACCAGGCAGTATACCAAAACCTGGTATAGAACCTATGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682589.1
CDS CAA 72 bp CTGTACTTTAAAGAGGTCACTTCAAGTGTAGACTCATaGTCCTGTATATTGGTTCTGTCCTTTATGGATACA +
Preference number: 6 (lower is better)
Translates to: LYFKEVTSSVDS*SCILVLSFMDT
Trigger: TGTATCCATAAAGGACAGAACCAATATACAGGACAATGAGTCTACACTTGAAGTGACCTCTTTAAAGTACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000682066.1
ENST00000682073.1
ENST00000682433.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000683039.1
ENST00000683235.1
ENST00000683535.1
ENST00000684471.1
ENST00000684626.1
ENST00000684769.1
CDS CAA 90 bp ATATCTTTGCTTCATCTTCCACAAAATTTTCTGGTGATAGATGACTaGCTGCTTCCAGTAAATAAGGTGAGGTACTGTACTTTAAAGAGG +
Preference number: 6 (lower is better)
Translates to: ISLLHLPQNFLVIDD*LLPVNKVRYCTLKR
Trigger: CCTCTTTAAAGTACAGTACCTCACCTTATTTACTGGAAGCAGCAAGTCATCTATCACCAGAAAATTTTGTGGAAGATGAAGCAAAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000682066.1
ENST00000682073.1
ENST00000682433.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000683039.1
ENST00000683235.1
ENST00000683535.1
ENST00000684471.1
ENST00000684626.1
ENST00000684769.1
CDS CAA 90 bp AGCAGTGGGATTGCTGGATCGTTTGGTAGCTCTATTTTAAGTTTTTaGAGGAACTTCCAAATTGTTCTTCATAGTGGTTGTCCTAATTTA +
Preference number: 6 (lower is better)
Translates to: SSGIAGSFGSSILSF*RNFQIVLHSGCPNL
Trigger: TAAATTAGGACAACCACTATGAAGAACAATTTGGAAGTTCCTCAAAAAACTTAAAATAGAGCTACCAAACGATCCAGCAATCCCACTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682477.1
CDS TCA 72 bp AAGTACCATAAAAAGTCCTTTAAGCATTATTTGAGTTaGTGCACTAATAACAGGTACTTCTCTTGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: KYHKKSFKHYLS*CTNNRYFSCLL
Trigger: GAGGAGGCAAGAGAAGTACCTGTTATTAGTGCATCAACTCAAATAATGCTTAAAGGACTTTTTATGGTACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000259008.7
ENST00000577598.5
ENST00000579028.2
ENST00000584322.2
ENST00000682066.1
ENST00000682073.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682611.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683381.1
ENST00000684584.1
CDS TCA 72 bp TGTTTACTGTCAGATTTGAGGATTCACATTTATCAGTaGAGGGCAAAACAGTTTTACTTTCCATCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: CLLSDLRIHIYQ*RAKQFYFPSSL
Trigger: CAGAGAAGATGGAAAGTAAAACTGTTTTGCCCTTCACTGATAAATGTGAATCCTCAAATCTGACAGTAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000259008.7
ENST00000682073.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683535.1
ENST00000684584.1
ENST00000684626.1
ENST00000684769.1
CDS TCA 72 bp GCATCAATCTTTAATGATGAAATAATGGTTTCTGATTaGGGGCATGATCCAAACGATGTGTTTACTGTCAGA +
Preference number: 6 (lower is better)
Translates to: ASIFNDEIMVSD*GHDPNDVFTVR
Trigger: TCTGACAGTAAACACATCGTTTGGATCATGCCCTCAATCAGAAACCATTATTTCATCATTAAAGATTGATGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000259008.7
ENST00000682073.1
ENST00000682453.1
ENST00000682477.1
ENST00000682589.1
ENST00000682755.1
ENST00000682989.1
ENST00000683039.1
ENST00000683235.1
ENST00000683535.1
ENST00000684584.1
ENST00000684626.1
ENST00000684769.1
CDS TCA 72 bp GCTATTCTAGGCATGAGGGACACACATGAAAAAGACTaGCATTACATCGTAATAGGACAGACAAATAATAAA +
Preference number: 6 (lower is better)
Translates to: AILGMRDTHEKD*HYIVIGQTNNK
Trigger: TTTATTATTTGTCTGTCCTATTACGATGTAATGTCAGTCTTTTTCATGTGTGTCCCTCATGCCTAGAATAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577913.2
ENST00000682369.1
CDS CCA 72 bp ACTGGAATGTTGAATTTCCTACCAAGATTTACTTGCTaGCACTTCAGGTATCTTCTAACTTGTTTACATAGT +
Preference number: 6 (lower is better)
Translates to: TGMLNFLPRFTC*HFRYLLTCLHS
Trigger: ACTATGTAAACAAGTTAGAAGATACCTGAAGTGCCAGCAAGTAAATCTTGGTAGGAAATTCAACATTCCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682589.1
CDS CAA 72 bp ACCATTAGTCATCTCATTAGCATACAAAATGTCACTTaGGAGATTCTAAGGATTTTAGGAGTTGTATGCCAG +
Preference number: 6 (lower is better)
Translates to: TISHLISIQNVT*EILRILGVVCQ
Trigger: CTGGCATACAACTCCTAAAATCCTTAGAATCTCCAAAGTGACATTTTGTATGCTAATGAGATGACTAATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682589.1