RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRINP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000078725

Ensembl transcript IDs: ENST00000265922.8, ENST00000373964.2, ENST00000482797.1

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGCACCTaGGGCCTAAGAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAG +
Preference number: 1 (lower is better)
Translates to: QFIAYAFSLLPQYST*GLRSNSLNAPQKAE
Trigger: CTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTCTTAGGCCTCAGGTGCTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265922.8
3UTR GCA 90 bp GTGTTTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTaGATATGCTTTCTCCCTTCTCCCCCAATACAGCACCTGAGGCCT +
Preference number: 1 (lower is better)
Translates to: VFNLSTCTAEIFTIH*ICFLPSPPIQHLRP
Trigger: AGGCCTCAGGTGCTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
3UTR-3UTR GCA 90 bp TATTCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTTGAGATTTATTGAGTaGCTGCTCTGTGACAGCTAT +
Preference number: 2 (lower is better)
Translates to: YSFCLLGTTETIHHMTTNLRFIE*LLCDSY
Trigger: ATAGCTGTCACAGAGCAGGCACTCAATAAATCTCAA...GTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
3UTR CCA 72 bp GAGTGCCTGCTCTGTGACAGCTATTATACTTGCATCTaGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAA +
Preference number: 3 (lower is better)
Translates to: ECLLCDSYYTCI*TLQSERVRVTE
Trigger: TTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGCTGTCACAGAGCAGGCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
3UTR-3UTR CAA 90 bp TTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCCTTCATTTTGTTCTGTaGTGTGTGTACAACAACAGG +
Preference number: 3 (lower is better)
Translates to: LILAPAQQRSLQFIAYAFLHFVL*CVYNNR
Trigger: CCTGTTGTTGTACACACACAACAGAACAAAATGAAG...GAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp GACAGCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGCGGGTTCGCTCGCCTaGGCTCTCCTCCTCCCCGCG +
Preference number: 4 (lower is better)
Translates to: DSYYTCIWTLQSERVRVTAGSLA*ALLLPA
Trigger: CGCGGGGAGGAGGAGAGCGCAGGCGAGCGAACCCGC...AGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp TTGTTCTGTTGTGTGTGTACAACAACAGGAAAAGTCCATGGCAAGGAGTCCCGGCGGGGACTGCAGGCGTaGGGGTACCTGGCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: LFCCVCTTTGKVHGKESRRGLQA*GYLAPS
Trigger: GCTAGGAGCCAGGTACCCCCACGCCTGCAGTCCCCG...CCGGGACTCCTTGCCATGGACTTTTCCTGTTGTTGTACACACACAACAGAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TTTCTCCCTTCTCCCCCAATACAGCACCTGAGGCCTAAGAAGCAACTCCCTCAATGGCCAGGCTGCACATaGCGCAGCTGTTGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: FLPSPPIQHLRPKKQLPQWPGCT*RSCCSR
Trigger: GCGGGAACAACAGCTGCGCCATGTGCAGCCTGGCCA...TTGAGGGAGTTGCTTCTTAGGCCTCAGGTGCTGTATTGGGGGAGAAGGGAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGCCCTCCCAATGTGGCTaGGATGAGCAGGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: EATPSMLHKRLRPFFMTEPSQCG*DEQVGA
Trigger: GGCACCCACCTGCTCATCTCAGCCACATTGGGAGGG...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGGCACGGCGCGGGGACTaGAGGCGTGGGGGTACCTGG +
Preference number: 4 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQARRGD*RRGGTW
Trigger: CCAGGTACCCCCACGCCTGCAGTCCCCGCGCCGTGC...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp ATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCTTGCAGCAGTCCCAGCTGGTTCCTaGTGGGAGGGCTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: IWTLQSERVRVTELSLAAVPAGS*WEGCTE
Trigger: CTCAGTGCAGCCCTCCCACCAGGAACCAGCTGGGAC...TGCTGCAAGGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp TGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCTTGCAAGGCGGATGCTCCTTTaGAACTCCGGCATGAGGGGC +
Preference number: 4 (lower is better)
Translates to: CIWTLQSERVRVTELSLARRMLL*NSGMRG
Trigger: GCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGCCT...TGCAAGGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR GCA 90 bp AATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAGCGGGTTCGCTCGCCTaGGCTCTCCTCCTCCCCGCG +
Preference number: 4 (lower is better)
Translates to: NAPQKAETLLHDRVSIEIAGSLA*ALLLPA
Trigger: CGCGGGGAGGAGGAGAGCGCAGGCGAGCGAACCCGC...TATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp ATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCTTGCAGCAAACTTGGGAGAGCCCTaGGTGCAGCTCGCATTCCGG +
Preference number: 4 (lower is better)
Translates to: IWTLQSERVRVTELSLAANLGEP*VQLAFR
Trigger: CCGGAATGCGAGCTGCACGCAGGGCTCTCCCAAGTT...TGCTGCAAGGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp CTCTGTGACAGCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGAGGCGTGGGGGTACCTaGCTCCTAGCAGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LCDSYYTCIWTLQSERVRRRGGT*LLAAWL
Trigger: GAGCCAGGCTGCTAGGAGCCAGGTACCCCCACGCCT...CCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGCTGTCACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGGGCGCTGGCACAGCGTaGTGCTGCCGTGGCACACGC +
Preference number: 4 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQGAGTA*CCRGTR
Trigger: GCGTGTGCCACGGCAGCACCACGCTGTGCCAGCGCC...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGAGGTCCACGGGGCCCTaGCCAGTCTCATTTCGCAGT +
Preference number: 4 (lower is better)
Translates to: EATPSMLHKRLRPFFMTERSTGP*PVSFRS
Trigger: ACTGCGAAATGAGACTGGCCAGGGCCCCGTGGACCT...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp TGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCTTGCACCAATGTGGCTGAGATaGGCAGGTGGGTGCCGTACT +
Preference number: 4 (lower is better)
Translates to: CIWTLQSERVRVTELSLAPMWLR*AGGCRT
Trigger: AGTACGGCACCCACCTGCTCATCTCAGCCACATTGG...TGCAAGGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR GCA 90 bp TTGTTCTGTTGTGTGTGTACAACAACAGGAAAAGTCCATGGCAAGGAGTCCCGGAACTTGGGAGAGCCCTaGGTGCAGCTCGCATTCCGG +
Preference number: 4 (lower is better)
Translates to: LFCCVCTTTGKVHGKESRNLGEP*VQLAFR
Trigger: CCGGAATGCGAGCTGCACGCAGGGCTCTCCCAAGTT...CCGGGACTCCTTGCCATGGACTTTTCCTGTTGTTGTACACACACAACAGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp ATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCTTGCAGCAAGGATAGGTAGCTCCTaGAGTGGTGGAAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: IWTLQSERVRVTELSLAARIGSS*SGGKAP
Trigger: GGGGGCCTTTCCACCACTCCAGGAGCTACCTATCCT...TGCTGCAAGGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp AATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATACAGGGGATGGGGCGCTaGCACAGCGTGGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: NAPQKAETLLHDRVSIEIQGMGR*HSVVLP
Trigger: CGGCAGCACCACGCTGTGCCAGCGCCCCATCCCCTG...TATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp ATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTTCCCGAGGACAGGCATaGATCCCGGCTCCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: IILASGHSKVKGSGSLNFSRGQA*IPAPEG
Trigger: GCCTTCCGGAGCCGGGATTCATGCCTGTCCTCGGGA...AAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp TGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCTTGCAGTGGGAGGGCTGCACTaGGATACGGCCCCATATAAA +
Preference number: 4 (lower is better)
Translates to: CIWTLQSERVRVTELSLAVGGLH*DTAPYK
Trigger: TTTATATGGGGCCGTATCTCAGTGCAGCCCTCCCAC...TGCAAGGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR GCA 90 bp GCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAACACGCGCCAGATCAGTTTaGAGCCGTGGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: APQKAETLLHDRVSIEITRARSV*SRGVRE
Trigger: CTCCCGGACCCCACGGCTGCAAACTGATCTGGCGCG...TGTTATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp TGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCTTGCAATGGGGCAGTTGCACTaGGGAAACTCCTCGGCACAT +
Preference number: 4 (lower is better)
Translates to: CIWTLQSERVRVTELSLAMGQLH*GNSSAH
Trigger: ATGTGCCGAGGAGTTTCCGCAGTGCAACTGCCCCAT...TGCAAGGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR GCA 90 bp TTTCTCCCTTCTCCCCCAATACAGCACCTGAGGCCTAAGAAGCAACTCCCTCAAGATCTTTTGTCTCTGTaGCTCCGTGGCACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: FLPSPPIQHLRPKKQLPQDLLSL*LRGTLQ
Trigger: CTGCAGAGTGCCACGGAGGCACAGAGACAAAAGATC...TTGAGGGAGTTGCTTCTTAGGCCTCAGGTGCTGTATTGGGGGAGAAGGGAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp ACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATAGGCACAGCGTGGTGCTaGCGTGGCACACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TAEIFTIHCICFLPSPPIGTAWC*RGTRSS
Trigger: GGAGCTGCGTGTGCCACGGCAGCACCACGCTGTGCC...TATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGCGAGTCCACGTTCTGTaGTTCACAGCGGCCTCGATA +
Preference number: 4 (lower is better)
Translates to: EATPSMLHKRLRPFFMTERVHVL*FTAASI
Trigger: TATCGAGGCCGCTGTGAACCACAGAACGTGGACTCG...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp AATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATATCCCGAGGACAGGCATaGATCCCGGCTCCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: NAPQKAETLLHDRVSIEISRGQA*IPAPEG
Trigger: GCCTTCCGGAGCCGGGATTCATGCCTGTCCTCGGGA...TATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp TGTGACAGCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCTTTGAAACTCCGGCATaGGGGGCACTGGATGGCGGA +
Preference number: 4 (lower is better)
Translates to: CDSYYTCIWTLQSERVRVFETPA*GALDGG
Trigger: TCCGCCATCCAGTGCCCCTCATGCCGGAGTTTCAAA...GACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGCTGTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp TATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTCCCTCCCAATGTGGCTaGGATGAGCAGGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: YYTCIWTLQSERVRVTELPSQCG*DEQVGA
Trigger: GGCACCCACCTGCTCATCTCAGCCACATTGGGAGGG...AAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp TTTCTCCCTTCTCCCCCAATACAGCACCTGAGGCCTAAGAAGCAACTCCCTCAAATTACAGTAGAGGAGTaGCTGGACCCTTGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: FLPSPPIQHLRPKKQLPQITVEE*LDPCKP
Trigger: TGGCTTGCAAGGGTCCAGTCACTCCTCTACTGTAAT...TTGAGGGAGTTGCTTCTTAGGCCTCAGGTGCTGTATTGGGGGAGAAGGGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp TTTCTCCCTTCTCCCCCAATACAGCACCTGAGGCCTAAGAAGCAACTCCCTCAACGATCACCATGTGGATaGAGTCCATGCGGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: FLPSPPIQHLRPKKQLPQRSPCG*SPCGSC
Trigger: ACAAGAACCGCATGGACTTCATCCACATGGTGATCG...TTGAGGGAGTTGCTTCTTAGGCCTCAGGTGCTGTATTGGGGGAGAAGGGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp TTTCTCCCTTCTCCCCCAATACAGCACCTGAGGCCTAAGAAGCAACTCCCTCAATCTGGTCCGACTGTTTaGGGATCTCCGTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: FLPSPPIQHLRPKKQLPQSGPTV*GSPCCT
Trigger: TGTACAACACGGAGATCCTCAAACAGTCGGACCAGA...TTGAGGGAGTTGCTTCTTAGGCCTCAGGTGCTGTATTGGGGGAGAAGGGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp TTGTTCTGTTGTGTGTGTACAACAACAGGAAAAGTCCATGGCAAGGAGTCCCGGCCCCAATACAGCACCTaGGGCCTAAGAAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: LFCCVCTTTGKVHGKESRPQYST*GLRSNS
Trigger: GGAGTTGCTTCTTAGGCCTCAGGTGCTGTATTGGGG...CCGGGACTCCTTGCCATGGACTTTTCCTGTTGTTGTACACACACAACAGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp TCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGTGGGAGAGCCCTGCGTaGAGCTCGCATTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: SFCLLGTTETIHHMTTNWWESPA*SSHSGH
Trigger: GTGCCCGGAATGCGAGCTGCACGCAGGGCTCTCCCA...CCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR GCA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGGTTGACCTGCTGCACTaGACTGCGCAGGAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQVDLLH*TAQEVG
Trigger: GCCGACCTCCTGCGCAGTGCAGTGCAGCAGGTCAAC...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp ACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATAATCAGTTTGCAGCCGTaGGGTCCGGGAGCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TAEIFTIHCICFLPSPPIISLQP*GPGARR
Trigger: CCGCCTCGCTCCCGGACCCCACGGCTGCAAACTGAT...TATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCTTGCATGGCTCCTAGCAGCCTaGCTCATACTCAGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: CIWTLQSERVRVTELSLAWLLAA*LILSRK
Trigger: TTTACGGCTGAGTATGAGCCAGGCTGCTAGGAGCCA...TGCAAGGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp CTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGATTATCGGGGACTGCAGGCGTaGGGGTACCTGGCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: LSSGYDRNNTSYDHKLDYRGLQA*GYLAPS
Trigger: GCTAGGAGCCAGGTACCCCCACGCCTGCAGTCCCCG...ATAATCCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp ATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCTTGCAGCAGATCTCTCCTCTCGATaGCTGTGTTCCTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: IWTLQSERVRVTELSLAADLSSR*LCSSPS
Trigger: GGAAGGTGAGGAACACAGCCATCGAGAGGAGAGATC...TGCTGCAAGGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp GACAGCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTATGAGGGGCACTGGATaGCGGACCAGATCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: DSYYTCIWTLQSERVRVTMRGTG*RTRSLL
Trigger: GAGGAGAGATCTGGTCCGCCATCCAGTGCCCCTCAT...AGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp TATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCTTCGGCCCAAGACTTaGCCATGTTGGCCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: YTCIWTLQSERVRVTELSLRPKT*PCWPAC
Trigger: ACACGCTGGCCAACATGGCCAAGTCTTGGGCCGAAG...GGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp TATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCTTGAGTGGCATTCCCTaGCTTCCTGTCGAGGCGACT +
Preference number: 4 (lower is better)
Translates to: YTCIWTLQSERVRVTELSLSGIP*LPVEAT
Trigger: AGTCGCCTCGACAGGAAGTCAGGGAATGCCACTCAA...GGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp TTGTTCTGTTGTGTGTGTACAACAACAGGAAAAGTCCATGGCAAGGAGTCCCGGGTCAACAAAGTAGGATaGTGCGAGCTGGTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LFCCVCTTTGKVHGKESRVNKVG*CELVQS
Trigger: GCTCTGCACCAGCTCGCATCATCCTACTTTGTTGAC...CCGGGACTCCTTGCCATGGACTTTTCCTGTTGTTGTACACACACAACAGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp ATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCGTCAACAAAGTAGGATaGTGCGAGCTGGTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: ILASGHSKVKGSGSLNFPVNKVG*CELVQS
Trigger: GCTCTGCACCAGCTCGCATCATCCTACTTTGTTGAC...GGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp AATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAGGCGACAGCGTACACTaGGGCCGAAAAGCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: NAPQKAETLLHDRVSIEIGDSVH*GRKACG
Trigger: CCCGCAAGCTTTTCGGCCTCAGTGTACGCTGTCGCC...TATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp ATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCTTGCAGCATGCAGTGGCACTGAGTaGGACTCTCTACCTGAATTC +
Preference number: 4 (lower is better)
Translates to: IWTLQSERVRVTELSLAACSGTE*DSLPEF
Trigger: GAATTCAGGTAGAGAGTCTCACTCAGTGCCACTGCA...TGCTGCAAGGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR GCA 90 bp TGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGATTATGCGCGCCAGATCAGTTTaGAGCCGTGGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: CLLGTTETIHHMTTNWIMRARSV*SRGVRE
Trigger: CTCCCGGACCCCACGGCTGCAAACTGATCTGGCGCG...CATAATCCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR GCA 90 bp TGTGACAGCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCTGCCAAGCAGGCGGATaGTCCTTTGAAACTCCGGCA +
Preference number: 4 (lower is better)
Translates to: CDSYYTCIWTLQSERVRVCQAGG*SFETPA
Trigger: TGCCGGAGTTTCAAAGGAGCATCCGCCTGCTTGGCA...GACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGCTGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGCGACACTGGCTGTTCTaGCACAGGTACTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQRHWLF*HRYSPS
Trigger: GGAGGGGGAGTACCTGTGCCAGAACAGCCAGTGTCG...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCATTGGCAGCGACACTaGCTGTTCTGGCACAGGTAC +
Preference number: 4 (lower is better)
Translates to: YTCIWTLQSERVRVTELSHWQRH*LFWHRY
Trigger: GTACCTGTGCCAGAACAGCCAGTGTCGCTGCCAATG...GGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp TATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCAACTCCTCGGCACATTaGCAGCGACACTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: YTCIWTLQSERVRVTELSNSSAH*QRHWLF
Trigger: GAACAGCCAGTGTCGCTGCCAATGTGCCGAGGAGTT...GGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGCCGATGGTCAGGAAGTaGTTGCTGGGGAGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQPMVRK*LLGRRF
Trigger: GAAGCGCCTCCCCAGCAACCACTTCCTGACCATCGG...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TTGTTCTGTTGTGTGTGTACAACAACAGGAAAAGTCCATGGCAAGGAGTCCCGGGATGGATGCTTCCGATaGTCAGGAAGTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LFCCVCTTTGKVHGKESRDGCFR*SGSGCW
Trigger: CCAGCAACCACTTCCTGACCATCGGAAGCATCCATC...CCGGGACTCCTTGCCATGGACTTTTCCTGTTGTTGTACACACACAACAGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGCATAGACAAAGAACATaGGGTCCAGGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: EATPSMLHKRLRPFFMTEHRQRT*GPGCCC
Trigger: GCAACAGCAGCCTGGACCCCATGTTCTTTGTCTATG...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp ATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCGCTCCCTTTCAGACTTaGCTCAAGGCCACTCATGCA +
Preference number: 4 (lower is better)
Translates to: ILASGHSKVKGSGSLNFPAPFQT*LKATHA
Trigger: TGCATGAGTGGCCTTGAGCCAAGTCTGAAAGGGAGC...GGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp TTGTTCTGTTGTGTGTGTACAACAACAGGAAAAGTCCATGGCAAGGAGTCCCGGGCCCCCTGTCTGAAATaGGCCAATCAAATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LFCCVCTTTGKVHGKESRAPCLK*ANQIPW
Trigger: CCAAGGAATTTGATTGGCTCATTTCAGACAGGGGGC...CCGGGACTCCTTGCCATGGACTTTTCCTGTTGTTGTACACACACAACAGAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp AATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAAGGCGGATGCTCCTTTaGAACTCCGGCATGAGGGGC +
Preference number: 4 (lower is better)
Translates to: NAPQKAETLLHDRVSIEIRRMLL*NSGMRG
Trigger: GCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGCCT...TATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp TGTGACAGCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCCCTCCCCATTGCACATaGTATAGCTCAAGGCCGACT +
Preference number: 4 (lower is better)
Translates to: CDSYYTCIWTLQSERVRVPPHCT*YSSRPT
Trigger: AGTCGGCCTTGAGCTATATCATGTGCAATGGGGAGG...GACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGCTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR GCA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGCTTGAAGGTGCAGTTTaGTCTCCGTGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: EATPSMLHKRLRPFFMTELEGAV*SPCFAE
Trigger: TTCTGCAAAGCACGGAGAGCAAACTGCACCTTCAAG...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGGCAGGTCCCAGTCATTaGCCCAGTGCTGATGGATGC +
Preference number: 4 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQAGPSH*PSADGC
Trigger: GCATCCATCAGCACTGGGGCAATGACTGGGACCTGC...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp TTTTTAGTGTTTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCGCTGGCACAGCGTGGTaGTGCCGTGGCACACGCAGC +
Preference number: 4 (lower is better)
Translates to: FLVFNLSTCTAEIFTIHCAGTAW*CRGTRS
Trigger: GCTGCGTGTGCCACGGCAGCACCACGCTGTGCCAGC...GCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAAACACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTGTCAATGTCCGTCTTTaGCGGAGAGCTGCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: YYTCIWTLQSERVRVTELVNVRL*RRAAGG
Trigger: TCCTCCCGCAGCTCTCCGCCAAAGACGGACATTGAC...AAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGCATTCTGTGGAGTCCTaGAGTCAATGTCCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: EATPSMLHKRLRPFFMTEHSVES*SQCPSL
Trigger: CAAAGACGGACATTGACTCCAGGACTCCACAGAATG...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTCTTGCTCCATTCTGTaGAGTCCTGGAGTCAATGTC +
Preference number: 4 (lower is better)
Translates to: EATPSMLHKRLRPFFMTESCSIL*SPGVNV
Trigger: GACATTGACTCCAGGACTCCACAGAATGGAGCAAGA...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp GCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTCCTTGGAGACATGTTaGTCTGTCCCAGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: AIILASGHSKVKGSGSLNSLETC*SVPAGS
Trigger: GGAACCAGCTGGGACAGACCAACATGTCTCCAAGGA...GTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGCATGAAGCCTCCTCATaGTACCATCACGGTCAACAA +
Preference number: 4 (lower is better)
Translates to: EATPSMLHKRLRPFFMTEHEASS*YHHGQQ
Trigger: TTGTTGACCGTGATGGTACCATGAGGAGGCTTCATG...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp CATTTCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCAGCGTGGTGCTGCCGTaGCACACGCAGCTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: HFLQKGKMAVSVVHYIYLSVVLP*HTQLRW
Trigger: CCAGCGGAGCTGCGTGTGCCACGGCAGCACCACGCT...GAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TTGTTCTGTTGTGTGTGTACAACAACAGGAAAAGTCCATGGCAAGGAGTCCCGGATGCCGATCACCATGTaGATGAAGTCCATGCGGTTC +
Preference number: 4 (lower is better)
Translates to: LFCCVCTTTGKVHGKESRMPITM*MKSMRF
Trigger: GAACCGCATGGACTTCATCCACATGGTGATCGGCAT...CCGGGACTCCTTGCCATGGACTTTTCCTGTTGTTGTACACACACAACAGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGAGTTTGGCTGTCATCTaGTCCGACTGTTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: EATPSMLHKRLRPFFMTESLAVI*SDCLRI
Trigger: GATCCTCAAACAGTCGGACCAGATGACAGCCAAACT...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp TGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCTTGCACTGGTTGTAAATCCTTaGCGGTGTCTTTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: CIWTLQSERVRVTELSLALVVNP*RCLSTK
Trigger: CTTTGTGGAAAGACACCGTCAAGGATTTACAACCAG...TGCAAGGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp GCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAACATTGAGTGGCATTCCCTaGCTTCCTGTCGAGGCGACT +
Preference number: 4 (lower is better)
Translates to: APQKAETLLHDRVSIEITLSGIP*LPVEAT
Trigger: AGTCGCCTCGACAGGAAGTCAGGGAATGCCACTCAA...TGTTATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp TTTCTCCCTTCTCCCCCAATACAGCACCTGAGGCCTAAGAAGCAACTCCCTCAACTTGATTGCTCCAGTTaGTATCTGGATCTCATGAAG +
Preference number: 4 (lower is better)
Translates to: FLPSPPIQHLRPKKQLPQLDCSS*YLDLMK
Trigger: CTTCATGAGATCCAGATATCAACTGGAGCAATCAAG...TTGAGGGAGTTGCTTCTTAGGCCTCAGGTGCTGTATTGGGGGAGAAGGGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp AATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAGTGGACGTAGAGGCGTaGGTCCATCTTCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NAPQKAETLLHDRVSIEIVDVEA*VHLLQQ
Trigger: CTGCTGCAGAAGATGGACTCACGCCTCTACGTCCAC...TATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp TTTTTAGTGTTTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCTGGGAGAGCCCTGCGTaGAGCTCGCATTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: FLVFNLSTCTAEIFTIHCWESPA*SSHSGH
Trigger: GTGCCCGGAATGCGAGCTGCACGCAGGGCTCTCCCA...GCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAAACACTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGCAAACCTCCAGTTCATaGTTTTCTGCCGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: EATPSMLHKRLRPFFMTEQTSSS*FSAGLF
Trigger: AAAAAGGCCGGCAGAAAAGCATGAACTGGAGGTTTG...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp CTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGATTATTCCTGGTGGGAGGGCTaGACTGAGATACGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LSSGYDRNNTSYDHKLDYSWWEG*TEIRPH
Trigger: ATGGGGCCGTATCTCAGTGCAGCCCTCCCACCAGGA...ATAATCCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR GCA 90 bp TATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCTTGCTCTCCGTGCTTTaGAGAAGGACGGAACTCACA +
Preference number: 4 (lower is better)
Translates to: YTCIWTLQSERVRVTELSLLSVL*RRTELT
Trigger: TGTGAGTTCCGTCCTTCTGCAAAGCACGGAGAGCAA...GGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR GCA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGAGATGTTGGCCAGGCTaGACATGGCGCAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQRCWPG*TWRSCC
Trigger: ACAACAGCTGCGCCATGTGCAGCCTGGCCAACATCT...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp GCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAACATCAAAGCTGATGAACTaGTCGCTCCGCTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: APQKAETLLHDRVSIEITSKLMN*SLRSES
Trigger: GGACTCGGAGCGGAGCGAGCAGTTCATCAGCTTTGA...TGTTATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TTTTTAGTGTTTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCAGGCGTGGGGGTACCTaGCTCCTAGCAGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FLVFNLSTCTAEIFTIHCRRGGT*LLAAWL
Trigger: GAGCCAGGCTGCTAGGAGCCAGGTACCCCCACGCCT...GCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAAACACTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp ACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATAGTCAATGTCCGTCTTTaGCGGAGAGCTGCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TAEIFTIHCICFLPSPPIVNVRL*RRAAGG
Trigger: TCCTCCCGCAGCTCTCCGCCAAAGACGGACATTGAC...TATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TGTGACAGCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCGCTGAGATGAGCAGGTaGGTGCCGTACTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: CDSYYTCIWTLQSERVRVAEMSR*VPYFLM
Trigger: CATCAAAAAGTACGGCACCCACCTGCTCATCTCAGC...GACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGCTGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp CTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGATTATCGACACTGGCTGTTCTaGCACAGGTACTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LSSGYDRNNTSYDHKLDYRHWLF*HRYSPS
Trigger: GGAGGGGGAGTACCTGTGCCAGAACAGCCAGTGTCG...ATAATCCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp AATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAGTCTCTGTGCCTCCGTaGCACTCTGCAGGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: NAPQKAETLLHDRVSIEIVSVPP*HSAGAC
Trigger: ACAAGCTCCTGCAGAGTGCCACGGAGGCACAGAGAC...TATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp GCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAACATGGTGGTTGGGATTGTaGCGACAGCGTACACTGAGG +
Preference number: 4 (lower is better)
Translates to: APQKAETLLHDRVSIEITWWLGL*RQRTLR
Trigger: CCTCAGTGTACGCTGTCGCCACAATCCCAACCACCA...TGTTATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTCTATCACGCAGGGGATaGGGCGCTGGCACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: SSKKEKWQCQLYITYISLLSRRG*GAGTAW
Trigger: CCACGCTGTGCCAGCGCCCCATCCCCTGCGTGATAG...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGCTGCTGTTGCGCATCTaGCAGATGCGCATGGACATG +
Preference number: 4 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQLLLRI*QMRMDM
Trigger: CATGTCCATGCGCATCTGCCAGATGCGCAACAGCAG...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp TATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCGATATCTGGATCTCATaGAGCCTCCTCATGGTACCA +
Preference number: 4 (lower is better)
Translates to: YTCIWTLQSERVRVTELSDIWIS*SLLMVP
Trigger: TGGTACCATGAGGAGGCTTCATGAGATCCAGATATC...GGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp GCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAACACCTCCCCATTGCACATaGTATAGCTCAAGGCCGACT +
Preference number: 4 (lower is better)
Translates to: APQKAETLLHDRVSIEITPPHCT*YSSRPT
Trigger: AGTCGGCCTTGAGCTATATCATGTGCAATGGGGAGG...TGTTATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp GCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAACAGCAGTTTGCTCTCCGTaGTTTGCAGAAGGACGGAAC +
Preference number: 4 (lower is better)
Translates to: APQKAETLLHDRVSIEITAVCSP*FAEGRN
Trigger: GTTCCGTCCTTCTGCAAAGCACGGAGAGCAAACTGC...TGTTATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp CTCTGTGACAGCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGCTTGAAGGTGCAGTTTaGTCTCCGTGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LCDSYYTCIWTLQSERVRLEGAV*SPCFAE
Trigger: TTCTGCAAAGCACGGAGAGCAAACTGCACCTTCAAG...CCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGCTGTCACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR GCA 90 bp AACATGCCCAACGCTTTTATACAGTTGCTAGAACGTTTTCATTTCCAACAAATGGGTCCAGGCTGCTGTTaGGCATCTGGCAGATGCGCA +
Preference number: 4 (lower is better)
Translates to: NMPNAFIQLLERFHFQQMGPGCC*ASGRCA
Trigger: TGCGCATCTGCCAGATGCGCAACAGCAGCCTGGACC...CATTTGTTGGAAATGAAAACGTTCTAGCAACTGTATAAAAGCGTTGGGCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp AACATGCCCAACGCTTTTATACAGTTGCTAGAACGTTTTCATTTCCAACAAATGGACTGGTTGACCTGCTaGACTGCACTGCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NMPNAFIQLLERFHFQQMDWLTC*TALRRR
Trigger: CCTCCTGCGCAGTGCAGTGCAGCAGGTCAACCAGTC...CATTTGTTGGAAATGAAAACGTTCTAGCAACTGTATAAAAGCGTTGGGCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCATTCTGTGGAGTCCTaGAGTCAATGTCCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: YTCIWTLQSERVRVTELSHSVES*SQCPSL
Trigger: CAAAGACGGACATTGACTCCAGGACTCCACAGAATG...GGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTGTCCCAGCTGGTTCCTaGTGGGAGGGCTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: SSKKEKWQCQLYITYISLVPAGS*WEGCTE
Trigger: CTCAGTGCAGCCCTCCCACCAGGAACCAGCTGGGAC...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp GCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAACAGATCTCTCCTCTCGATaGCTGTGTTCCTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: APQKAETLLHDRVSIEITDLSSR*LCSSPS
Trigger: GGAAGGTGAGGAACACAGCCATCGAGAGGAGAGATC...TGTTATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp AACATGCCCAACGCTTTTATACAGTTGCTAGAACGTTTTCATTTCCAACAAATGCGGCATGAGGGGCACTaGATGGCGGACCAGATCTCT +
Preference number: 4 (lower is better)
Translates to: NMPNAFIQLLERFHFQQMRHEGH*MADQIS
Trigger: AGAGATCTGGTCCGCCATCCAGTGCCCCTCATGCCG...CATTTGTTGGAAATGAAAACGTTCTAGCAACTGTATAAAAGCGTTGGGCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp CTCTGTGACAGCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGCATGAAGCCTCCTCATaGTACCATCACGGTCAACAA +
Preference number: 4 (lower is better)
Translates to: LCDSYYTCIWTLQSERVRHEASS*YHHGQQ
Trigger: TTGTTGACCGTGATGGTACCATGAGGAGGCTTCATG...CCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGCTGTCACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp CATTTCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCCACACGCAGCTCCGCTaGCTCTCCAGGAAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: HFLQKGKMAVSVVHYIYLHTQLR*LSRKVP
Trigger: GGGAACCTTCCTGGAGAGCCAGCGGAGCTGCGTGTG...GAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TTTTTAGTGTTTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCCGCAGAGGGAGATGTTaGCCAGGCTGCACATGGCGC +
Preference number: 4 (lower is better)
Translates to: FLVFNLSTCTAEIFTIHCRRGRC*PGCTWR
Trigger: GCGCCATGTGCAGCCTGGCCAACATCTCCCTCTGCG...GCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAAACACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCGAGAACAAGTCCAGCTaGGGTTTCCCCGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LILAPAQQRSLQFIAYAFENKSS*GFPGAT
Trigger: TGTGGCCCCGGGGAAACCCCAGCTGGACTTGTTCTC...GAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp TTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCCCAATGTGGCTGAGATaGGCAGGTGGGTGCCGTACT +
Preference number: 4 (lower is better)
Translates to: LILAPAQQRSLQFIAYAFPMWLR*AGGCRT
Trigger: AGTACGGCACCCACCTGCTCATCTCAGCCACATTGG...GAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp AATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATACTTGCAAGCCACTGCTaGATTGTCCTCTCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: NAPQKAETLLHDRVSIEILASHC*IVLSLG
Trigger: GCCTAGAGAGAGGACAATTCAGCAGTGGCTTGCAAG...TATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGGCACGTCTGAGATCTTaGTGTAGAACTGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQARLRS*CRTASW
Trigger: CCAAGAGGCAGTTCTACATCAAGATCTCAGACGTGC...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp AACATGCCCAACGCTTTTATACAGTTGCTAGAACGTTTTCATTTCCAACAAATGGCAGGAGGTCGGCGTTaGACCTCAGGCTATACCCAA +
Preference number: 4 (lower is better)
Translates to: NMPNAFIQLLERFHFQQMAGGRR*TSGYTQ
Trigger: TTGGGTATAGCCTGAGGTTCAACGCCGACCTCCTGC...CATTTGTTGGAAATGAAAACGTTCTAGCAACTGTATAAAAGCGTTGGGCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp GCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACGTGAGACTCTCTACCTaGATTCTCCAGGTCCTTATA +
Preference number: 4 (lower is better)
Translates to: AIILASGHSKVKGSGSLNVRLST*ILQVLI
Trigger: TATAAGGACCTGGAGAATTCAGGTAGAGAGTCTCAC...GTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR GCA 90 bp CATTTCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCCTGGTGGGAGGGCTaGACTGAGATACGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: HFLQKGKMAVSVVHYIYLSWWEG*TEIRPH
Trigger: ATGGGGCCGTATCTCAGTGCAGCCCTCCCACCAGGA...GAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp TTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCGCTTGTAGCCCTTGTTaGAGGAGCCGCAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LILAPAQQRSLQFIAYAFACSPC*RSRRGR
Trigger: TCTCCCTCTGCGGCTCCTGCAACAAGGGCTACAAGC...GAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp GGTACGACAGAAACAATACATCATATGACCACAAACTGGATTATGCTATTCATTCGGCATGAGGGGCACTaGATGGCGGACCAGATCTCT +
Preference number: 4 (lower is better)
Translates to: GTTETIHHMTTNWIMLFIRHEGH*MADQIS
Trigger: AGAGATCTGGTCCGCCATCCAGTGCCCCTCATGCCG...AATGAATAGCATAATCCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGGCTGAGATGAGCAGGTaGGTGCCGTACTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQAEMSR*VPYFLM
Trigger: CATCAAAAAGTACGGCACCCACCTGCTCATCTCAGC...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TGTGACAGCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCCTTCAACACTTTGAGTaGCATTCCCTGACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: CDSYYTCIWTLQSERVRVLQHFE*HSLTSC
Trigger: ACAGGAAGTCAGGGAATGCCACTCAAAGTGTTGAAG...GACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGCTGTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp AATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAGTGTACTCCATGATCTaGATGTCCGTGATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: NAPQKAETLLHDRVSIEIVYSMI*MSVMGQ
Trigger: CTGCCCCATCACGGACATCCAGATCATGGAGTACAC...TATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTTCCAGCCCTCCGAATaGCTCCCGCTAAAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LILAPAQQRSLQFIAYAFFQPSE*LPLKGL
Trigger: CAACCCCTTTAGCGGGAGCCATTCGGAGGGCTGGAA...GAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp AATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATATGTAGAACTGCCTCTTaGAGGGATCCGACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: NAPQKAETLLHDRVSIEICRTAS*RDPTGP
Trigger: TGGACCTGTCGGATCCCTCCAAGAGGCAGTTCTACA...TATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp AACATGCCCAACGCTTTTATACAGTTGCTAGAACGTTTTCATTTCCAACAAATGGTGGGAGGGCTGCACTaGGATACGGCCCCATATAAA +
Preference number: 4 (lower is better)
Translates to: NMPNAFIQLLERFHFQQMVGGLH*DTAPYK
Trigger: TTTATATGGGGCCGTATCTCAGTGCAGCCCTCCCAC...CATTTGTTGGAAATGAAAACGTTCTAGCAACTGTATAAAAGCGTTGGGCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTTTTGAAACTCCGGCATaGGGGGCACTGGATGGCGGA +
Preference number: 4 (lower is better)
Translates to: SSKKEKWQCQLYITYISLFETPA*GALDGG
Trigger: TCCGCCATCCAGTGCCCCTCATGCCGGAGTTTCAAA...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp CTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGATTATGTATCGATGAACTGCTaGGTGGTAGGTCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LSSGYDRNNTSYDHKLDYVSMNC*VVGLLP
Trigger: TGGCAGGAGACCTACCACTCAGCAGTTCATCGATAC...ATAATCCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGGATATCTGGATCTCATaGAGCCTCCTCATGGTACCA +
Preference number: 4 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQDIWIS*SLLMVP
Trigger: TGGTACCATGAGGAGGCTTCATGAGATCCAGATATC...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp TTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTCATTGCCCCAGTGCTaGTGGATGCTTCCGATGGTC +
Preference number: 4 (lower is better)
Translates to: LILAPAQQRSLQFIAYAFSLPQC*WMLPMV
Trigger: GACCATCGGAAGCATCCATCAGCACTGGGGCAATGA...GAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp CATTTCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCGTGTGTAGGACTGGTTaGCCTGCTGCACTGCACTGC +
Preference number: 4 (lower is better)
Translates to: HFLQKGKMAVSVVHYIYLVCRTG*PAALHC
Trigger: GCAGTGCAGTGCAGCAGGTCAACCAGTCCTACACAC...GAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp TCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGTCTTTGGCGGAGAGCTaGGGGAGGACGCTTTTTATT +
Preference number: 4 (lower is better)
Translates to: SFCLLGTTETIHHMTTNWSLAES*GRTLFI
Trigger: AATAAAAAGCGTCCTCCCGCAGCTCTCCGCCAAAGA...CCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR GCA 90 bp TTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTGCCAAGCAGGCGGATaGTCCTTTGAAACTCCGGCA +
Preference number: 4 (lower is better)
Translates to: LILAPAQQRSLQFIAYAFCQAGG*SFETPA
Trigger: TGCCGGAGTTTCAAAGGAGCATCCGCCTGCTTGGCA...GAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp ACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATATTGCTCTCCGTGCTTTaGAGAAGGACGGAACTCACA +
Preference number: 4 (lower is better)
Translates to: TAEIFTIHCICFLPSPPILLSVL*RRTELT
Trigger: TGTGAGTTCCGTCCTTCTGCAAAGCACGGAGAGCAA...TATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGAAAGCTTGCGGGCAGTaGGTTGGATCTTTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQKACGQ*VGSFVS
Trigger: AGAGACAAAAGATCCAACGCACTGCCCGCAAGCTTT...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp CATTTCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCACATGGGGTCCAGGCTaGTGTTGCGCATCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: HFLQKGKMAVSVVHYIYLTWGPG*CCASGR
Trigger: TCTGCCAGATGCGCAACAGCAGCCTGGACCCCATGT...GAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TTTTTAGTGTTTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCAGGATAGGTAGCTCCTaGAGTGGTGGAAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: FLVFNLSTCTAEIFTIHCRIGSS*SGGKAP
Trigger: GGGGGCCTTTCCACCACTCCAGGAGCTACCTATCCT...GCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAAACACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp CATTTCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCATGAGGGGCACTGGATaGCGGACCAGATCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: HFLQKGKMAVSVVHYIYLMRGTG*RTRSLL
Trigger: GAGGAGAGATCTGGTCCGCCATCCAGTGCCCCTCAT...GAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TTTTTAGTGTTTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCCTTCGGCCCAAGACTTaGCCATGTTGGCCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: FLVFNLSTCTAEIFTIHCLRPKT*PCWPAC
Trigger: ACACGCTGGCCAACATGGCCAAGTCTTGGGCCGAAG...GCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAAACACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCTTGCATATTATACTTGCATCTaGACACTCCAAAGTGAAAGG +
Preference number: 4 (lower is better)
Translates to: CIWTLQSERVRVTELSLAYYTCI*TLQSER
Trigger: CCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATA...TGCAAGGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp AACATGCCCAACGCTTTTATACAGTTGCTAGAACGTTTTCATTTCCAACAAATGGTATCGATGAACTGCTaGGTGGTAGGTCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: NMPNAFIQLLERFHFQQMVSMNC*VVGLLP
Trigger: TGGCAGGAGACCTACCACTCAGCAGTTCATCGATAC...CATTTGTTGGAAATGAAAACGTTCTAGCAACTGTATAAAAGCGTTGGGCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp TATTCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACGCAGTTTGCTCTCCGTaGTTTGCAGAAGGACGGAAC +
Preference number: 4 (lower is better)
Translates to: YSFCLLGTTETIHHMTTNAVCSP*FAEGRN
Trigger: GTTCCGTCCTTCTGCAAAGCACGGAGAGCAAACTGC...GTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR GCA 90 bp CATTTCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCATGGGGCAGTTGCACTaGGGAAACTCCTCGGCACAT +
Preference number: 4 (lower is better)
Translates to: HFLQKGKMAVSVVHYIYLMGQLH*GNSSAH
Trigger: ATGTGCCGAGGAGTTTCCGCAGTGCAACTGCCCCAT...GAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp TTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCCCCAGTGCTGATGGATaGTTCCGATGGTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LILAPAQQRSLQFIAYAFPSADG*FRWSGS
Trigger: ACTTCCTGACCATCGGAAGCATCCATCAGCACTGGG...GAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp GCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAACAATGTTTTCCACCGATTaGCCAGCAAAAGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: APQKAETLLHDRVSIEITMFSTD*PAKESS
Trigger: ACTGGACTCTTTTGCTGGGCAATCGGTGGAAAACAT...TGTTATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp TGTGACAGCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCTTGAGATTTATTGAGTaGCTGCTCTGTGACAGCTAT +
Preference number: 4 (lower is better)
Translates to: CDSYYTCIWTLQSERVRVLRFIE*LLCDSY
Trigger: ATAGCTGTCACAGAGCAGGCACTCAATAAATCTCAA...GACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGCTGTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp TTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTGGCTCCTAGCAGCCTaGCTCATACTCAGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: LILAPAQQRSLQFIAYAFWLLAA*LILSRK
Trigger: TTTACGGCTGAGTATGAGCCAGGCTGCTAGGAGCCA...GAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTCATTGGCAGCGACACTaGCTGTTCTGGCACAGGTAC +
Preference number: 4 (lower is better)
Translates to: SSKKEKWQCQLYITYISLHWQRH*LFWHRY
Trigger: GTACCTGTGCCAGAACAGCCAGTGTCGCTGCCAATG...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTAACTCCTCGGCACATTaGCAGCGACACTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SSKKEKWQCQLYITYISLNSSAH*QRHWLF
Trigger: GAACAGCCAGTGTCGCTGCCAATGTGCCGAGGAGTT...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TATTCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACGTGTACTCCATGATCTaGATGTCCGTGATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: YSFCLLGTTETIHHMTTNVYSMI*MSVMGQ
Trigger: CTGCCCCATCACGGACATCCAGATCATGGAGTACAC...GTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTTCTCTAGGCAGCTGGTaGTTGGGATTGTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: SSKKEKWQCQLYITYISLSLGSW*LGLWRQ
Trigger: CTGTCGCCACAATCCCAACCACCAGCTGCCTAGAGA...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTCTCTCTCTAGGCAGCTaGTGGTTGGGATTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: SSKKEKWQCQLYITYISLLSLGS*WLGLWR
Trigger: TCGCCACAATCCCAACCACCAGCTGCCTAGAGAGAG...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTTCAGCTCCAGGTCCTaGAAGTCCAGGTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: LILAPAQQRSLQFIAYAFFSSRS*KSRSVS
Trigger: TGAGACTGACCTGGACTTCCAGGACCTGGAGCTGAA...GAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp CTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGATTATGAAAGGCCCCCTGTCTaGAATGAGCCAATCAAATTC +
Preference number: 4 (lower is better)
Translates to: LSSGYDRNNTSYDHKLDYERPPV*NEPIKF
Trigger: GAATTTGATTGGCTCATTTCAGACAGGGGGCCTTTC...ATAATCCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp ACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATAAAACACCTGCACGTCTaGGATCTTGATGTAGAACTG +
Preference number: 4 (lower is better)
Translates to: TAEIFTIHCICFLPSPPIKHLHV*DLDVEL
Trigger: CAGTTCTACATCAAGATCTCAGACGTGCAGGTGTTT...TATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp AACATGCCCAACGCTTTTATACAGTTGCTAGAACGTTTTCATTTCCAACAAATGTCTTTGGCGGAGAGCTaGGGGAGGACGCTTTTTATT +
Preference number: 4 (lower is better)
Translates to: NMPNAFIQLLERFHFQQMSLAES*GRTLFI
Trigger: AATAAAAAGCGTCCTCCCGCAGCTCTCCGCCAAAGA...CATTTGTTGGAAATGAAAACGTTCTAGCAACTGTATAAAAGCGTTGGGCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp CATTTCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCCGTGAGTCCATCTTCTaGAGCAGGTACTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HFLQKGKMAVSVVHYIYLRESIF*SRYFSS
Trigger: GGAGCTGAAGTACCTGCTGCAGAAGATGGACTCACG...GAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTTTTTATTCGGCTCGGTaGGAACTTGGGAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SSKKEKWQCQLYITYISLFYSAR*ELGRAL
Trigger: CAGGGCTCTCCCAAGTTCCCACCGAGCCGAATAAAA...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp GGTACGACAGAAACAATACATCATATGACCACAAACTGGATTATGCTATTCATTTTTTATTCGGCTCGGTaGGAACTTGGGAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GTTETIHHMTTNWIMLFIFYSAR*ELGRAL
Trigger: CAGGGCTCTCCCAAGTTCCCACCGAGCCGAATAAAA...AATGAATAGCATAATCCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTTCCTTGGAGACATGTTaGTCTGTCCCAGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: SSKKEKWQCQLYITYISLSLETC*SVPAGS
Trigger: GGAACCAGCTGGGACAGACCAACATGTCTCCAAGGA...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp ACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATATTTTGTCCATATACATaGTCAAAGCCTCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: TAEIFTIHCICFLPSPPIFCPYT*SKPPPL
Trigger: GAGGGGAGGAGGCTTTGACCATGTATATGGACAAAA...TATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTTTGCGGGCAGTGCGTTaGATCTTTTGTCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SSKKEKWQCQLYITYISLLRAVR*IFCLCA
Trigger: GGCACAGAGACAAAAGATCCAACGCACTGCCCGCAA...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp CATTTCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCGATCTTCTCCCAGCGTaGGTAGCCAAATTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: HFLQKGKMAVSVVHYIYLDLLPA*VAKFPE
Trigger: TTCGGGGAATTTGGCTACCCACGCTGGGAGAAGATC...GAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTCGGGTTAGCAGAGTTTaGCTGTCATCTGGTCCGACT +
Preference number: 4 (lower is better)
Translates to: SSKKEKWQCQLYITYISLRVSRV*LSSGPT
Trigger: AGTCGGACCAGATGACAGCCAAACTCTGCTAACCCG...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp GACAGCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTATTCTTTCTGTCTTCTaGGTACGACAGAAACAATAC +
Preference number: 4 (lower is better)
Translates to: DSYYTCIWTLQSERVRVTILSVF*VRQKQY
Trigger: GTATTGTTTCTGTCGTACCCAGAAGACAGAAAGAAT...AGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp AACATGCCCAACGCTTTTATACAGTTGCTAGAACGTTTTCATTTCCAACAAATGGAAAGGCCCCCTGTCTaGAATGAGCCAATCAAATTC +
Preference number: 4 (lower is better)
Translates to: NMPNAFIQLLERFHFQQMERPPV*NEPIKF
Trigger: GAATTTGATTGGCTCATTTCAGACAGGGGGCCTTTC...CATTTGTTGGAAATGAAAACGTTCTAGCAACTGTATAAAAGCGTTGGGCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp AACATGCCCAACGCTTTTATACAGTTGCTAGAACGTTTTCATTTCCAACAAATGAGAGCTTCAACACTTTaGGTGGCATTCCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: NMPNAFIQLLERFHFQQMRASTL*VAFPDF
Trigger: GAAGTCAGGGAATGCCACTCAAAGTGTTGAAGCTCT...CATTTGTTGGAAATGAAAACGTTCTAGCAACTGTATAAAAGCGTTGGGCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR TCA 90 bp TATTCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACAGAGCTTCAACACTTTaGGTGGCATTCCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: YSFCLLGTTETIHHMTTNRASTL*VAFPDF
Trigger: GAAGTCAGGGAATGCCACTCAAAGTGTTGAAGCTCT...GTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp CTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGATTATCTTGATTGCTCCAGTTaGTATCTGGATCTCATGAAG +
Preference number: 4 (lower is better)
Translates to: LSSGYDRNNTSYDHKLDYLDCSS*YLDLMK
Trigger: CTTCATGAGATCCAGATATCAACTGGAGCAATCAAG...ATAATCCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp TTTTTAGTGTTTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCCAAGAGGAGCATCACTaGCGAAGAGGAATAGAACTG +
Preference number: 4 (lower is better)
Translates to: FLVFNLSTCTAEIFTIHCQEEHH*RRGIEL
Trigger: CAGTTCTATTCCTCTTCGTCAGTGATGCTCCTCTTG...GCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAAACACTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp TATTCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACCAAACCTCCAGTTCATaGTTTTCTGCCGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: YSFCLLGTTETIHHMTTNQTSSS*FSAGLF
Trigger: AAAAAGGCCGGCAGAAAAGCATGAACTGGAGGTTTG...GTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp GGTACGACAGAAACAATACATCATATGACCACAAACTGGATTATGCTATTCATTTCTTGCTCCATTCTGTaGAGTCCTGGAGTCAATGTC +
Preference number: 4 (lower is better)
Translates to: GTTETIHHMTTNWIMLFISCSIL*SPGVNV
Trigger: GACATTGACTCCAGGACTCCACAGAATGGAGCAAGA...AATGAATAGCATAATCCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CCA 90 bp TATTCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTTTTGTCCATATACATaGTCAAAGCCTCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: YSFCLLGTTETIHHMTTNFCPYT*SKPPPL
Trigger: GAGGGGAGGAGGCTTTGACCATGTATATGGACAAAA...GTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR TCA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTCTGGTTGTAAATCCTTaGCGGTGTCTTTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: SSKKEKWQCQLYITYISLLVVNP*RCLSTK
Trigger: CTTTGTGGAAAGACACCGTCAAGGATTTACAACCAG...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp TTTTTAGTGTTTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCCTATACCCAAACACCTaGACGTCTGAGATCTTGATG +
Preference number: 4 (lower is better)
Translates to: FLVFNLSTCTAEIFTIHCLYPNT*TSEILM
Trigger: CATCAAGATCTCAGACGTGCAGGTGTTTGGGTATAG...GCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAAACACTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CCA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTCTTCAACACTTTGAGTaGCATTCCCTGACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SSKKEKWQCQLYITYISLLQHFE*HSLTSC
Trigger: ACAGGAAGTCAGGGAATGCCACTCAAAGTGTTGAAG...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR GCA 90 bp CATTTCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTTTAATCTTAGCACCTaGACAGCAGAGATCTTTACA +
Preference number: 4 (lower is better)
Translates to: HFLQKGKMAVSVVHYIYLFNLST*TAEIFT
Trigger: TGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAAA...GAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGAAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 90 bp GGAGAGCCCTGCGTGCAGCTCGCATTCCGGGCACGGCGCGGGGACTaGAGGCGTGGGGGTACCTGGCTCCTAGCAGCCTGGCTCATACTC +
Preference number: 5 (lower is better)
Translates to: GEPCVQLAFRARRGD*RRGGTWLLAAWLIL
Trigger: GAGTATGAGCCAGGCTGCTAGGAGCCAGGTACCCCCACGCCTGCAGTCCCCGCGCCGTGCCCGGAATGCGAGCTGCACGCAGGGCTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS GCA 90 bp TCCCGCCTATCACGCAGGGGATGGGGCGCTGGCACAGCGTGGTGCTaGCGTGGCACACGCAGCTCCGCTGGCTCTCCAGGAAGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: SRLSRRGWGAGTAWC*RGTRSSAGSPGRFP
Trigger: GGGGAACCTTCCTGGAGAGCCAGCGGAGCTGCGTGTGCCACGGCAGCACCACGCTGTGCCAGCGCCCCATCCCCTGCGTGATAGGCGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 90 bp GCTGTTGCTCGCTCGCTCTCTCCCTCTCTCGCGGGTTCGCTCGCCTaGGCTCTCCTCCTCCCCGCGCGCCAGATCAGTTTGCAGCCGTGG +
Preference number: 5 (lower is better)
Translates to: AVARSLSPSLAGSLA*ALLLPARQISLQPW
Trigger: CCACGGCTGCAAACTGATCTGGCGCGCGGGGAGGAGGAGAGCGCAGGCGAGCGAACCCGCGAGAGAGGGAGAGAGCGAGCGAGCAACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CCA 90 bp ATGGCGCAGCTGTTGTTCCCGCCTATCACGCAGGGGATGGGGCGCTaGCACAGCGTGGTGCTGCCGTGGCACACGCAGCTCCGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: MAQLLFPPITQGMGR*HSVVLPWHTQLRWL
Trigger: GAGCCAGCGGAGCTGCGTGTGCCACGGCAGCACCACGCTGTGCCAGCGCCCCATCCCCTGCGTGATAGGCGGGAACAACAGCTGCGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 90 bp GGCTGCACATGGCGCAGCTGTTGTTCCCGCCTATCACGCAGGGGATaGGGCGCTGGCACAGCGTGGTGCTGCCGTGGCACACGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GCTWRSCCSRLSRRG*GAGTAWCCRGTRSS
Trigger: GGAGCTGCGTGTGCCACGGCAGCACCACGCTGTGCCAGCGCCCCATCCCCTGCGTGATAGGCGGGAACAACAGCTGCGCCATGTGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 90 bp GGACGCTTTTTATTCGGCTCGGTGGGAACTTGGGAGAGCCCTGCGTaGAGCTCGCATTCCGGGCACGGCGCGGGGACTGCAGGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: GRFLFGSVGTWESPA*SSHSGHGAGTAGVG
Trigger: CCCCACGCCTGCAGTCCCCGCGCCGTGCCCGGAATGCGAGCTGCACGCAGGGCTCTCCCAAGTTCCCACCGAGCCGAATAAAAAGCGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS GCA 90 bp TGTTCCCGCCTATCACGCAGGGGATGGGGCGCTGGCACAGCGTGGTaGTGCCGTGGCACACGCAGCTCCGCTGGCTCTCCAGGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: CSRLSRRGWGAGTAW*CRGTRSSAGSPGRF
Trigger: GAACCTTCCTGGAGAGCCAGCGGAGCTGCGTGTGCCACGGCAGCACCACGCTGTGCCAGCGCCCCATCCCCTGCGTGATAGGCGGGAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 90 bp TGTTGTTCCCGCCTATCACGCAGGGGATGGGGCGCTGGCACAGCGTaGTGCTGCCGTGGCACACGCAGCTCCGCTGGCTCTCCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: CCSRLSRRGWGAGTA*CCRGTRSSAGSPGR
Trigger: CCTTCCTGGAGAGCCAGCGGAGCTGCGTGTGCCACGGCAGCACCACGCTGTGCCAGCGCCCCATCCCCTGCGTGATAGGCGGGAACAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 90 bp GGGAGGACGCTTTTTATTCGGCTCGGTGGGAACTTGGGAGAGCCCTaGGTGCAGCTCGCATTCCGGGCACGGCGCGGGGACTGCAGGCGT +
Preference number: 5 (lower is better)
Translates to: GRTLFIRLGGNLGEP*VQLAFRARRGDCRR
Trigger: ACGCCTGCAGTCCCCGCGCCGTGCCCGGAATGCGAGCTGCACGCAGGGCTCTCCCAAGTTCCCACCGAGCCGAATAAAAAGCGTCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CCA 90 bp GTCTTTGGCGGAGAGCTGCGGGAGGACGCTTTTTATTCGGCTCGGTaGGAACTTGGGAGAGCCCTGCGTGCAGCTCGCATTCCGGGCACG +
Preference number: 5 (lower is better)
Translates to: VFGGELREDAFYSAR*ELGRALRAARIPGT
Trigger: CGTGCCCGGAATGCGAGCTGCACGCAGGGCTCTCCCAAGTTCCCACCGAGCCGAATAAAAAGCGTCCTCCCGCAGCTCTCCGCCAAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS GCA 90 bp TGTAGCCCTTGTTGCAGGAGCCGCAGAGGGAGATGTTGGCCAGGCTaGACATGGCGCAGCTGTTGTTCCCGCCTATCACGCAGGGGATGG +
Preference number: 5 (lower is better)
Translates to: CSPCCRSRRGRCWPG*TWRSCCSRLSRRGW
Trigger: CCATCCCCTGCGTGATAGGCGGGAACAACAGCTGCGCCATGTGCAGCCTGGCCAACATCTCCCTCTGCGGCTCCTGCAACAAGGGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 90 bp CGTTCTGTGGTTCACAGCGGCCTCGATACAGCTTGTAGCCCTTGTTaGAGGAGCCGCAGAGGGAGATGTTGGCCAGGCTGCACATGGCGC +
Preference number: 5 (lower is better)
Translates to: RSVVHSGLDTACSPC*RSRRGRCWPGCTWR
Trigger: GCGCCATGTGCAGCCTGGCCAACATCTCCCTCTGCGGCTCCTGCAACAAGGGCTACAAGCTGTATCGAGGCCGCTGTGAACCACAGAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 90 bp GCCAAGCAGGCGGATGCTCCTTTGAAACTCCGGCATGAGGGGCACTaGATGGCGGACCAGATCTCTCCTCTCGATGGCTGTGTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: AKQADAPLKLRHEGH*MADQISPLDGCVPH
Trigger: GTGAGGAACACAGCCATCGAGAGGAGAGATCTGGTCCGCCATCCAGTGCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGCCTGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CCA 90 bp TCTGCCTGTGCGTCTCTCTCTCTAGGCAGCTGGTGGTTGGGATTGTaGCGACAGCGTACACTGAGGCCGAAAAGCTTGCGGGCAGTGCGT +
Preference number: 5 (lower is better)
Translates to: SACASLSLGSWWLGL*RQRTLRPKSLRAVR
Trigger: ACGCACTGCCCGCAAGCTTTTCGGCCTCAGTGTACGCTGTCGCCACAATCCCAACCACCAGCTGCCTAGAGAGAGAGACGCACAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS GCA 90 bp GAGGCCGAAAAGCTTGCGGGCAGTGCGTTGGATCTTTTGTCTCTGTaGCTCCGTGGCACTCTGCAGGAGCTTGTAGCGGTTCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: EAEKLAGSALDLLSL*LRGTLQELVAVLQV
Trigger: GACCTGCAGAACCGCTACAAGCTCCTGCAGAGTGCCACGGAGGCACAGAGACAAAAGATCCAACGCACTGCCCGCAAGCTTTTCGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000482797.1
CDS GCA 90 bp AGCTCCAGGTCCTGGAAGTCCAGGTCAGTCTCAAAGCTGATGAACTaGTCGCTCCGCTCCGAGTCCACGTTCTGTGGTTCACAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: SSRSWKSRSVSKLMN*SLRSESTFCGSQRP
Trigger: AGGCCGCTGTGAACCACAGAACGTGGACTCGGAGCGGAGCGAGCAGTTCATCAGCTTTGAGACTGACCTGGACTTCCAGGACCTGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 90 bp TCGGCCCAAGACTTGGCCATGTTGGCCAGCGTGTACTCCATGATCTaGATGTCCGTGATGGGGCAGTTGCACTGCGGAAACTCCTCGGCA +
Preference number: 5 (lower is better)
Translates to: SAQDLAMLASVYSMI*MSVMGQLHCGNSSA
Trigger: TGCCGAGGAGTTTCCGCAGTGCAACTGCCCCATCACGGACATCCAGATCATGGAGTACACGCTGGCCAACATGGCCAAGTCTTGGGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CCA 90 bp TGGCGACAGCGTACACTGAGGCCGAAAAGCTTGCGGGCAGTGCGTTaGATCTTTTGTCTCTGTGCCTCCGTGGCACTCTGCAGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: WRQRTLRPKSLRAVR*IFCLCASVALCRSL
Trigger: CAAGCTCCTGCAGAGTGCCACGGAGGCACAGAGACAAAAGATCCAACGCACTGCCCGCAAGCTTTTCGGCCTCAGTGTACGCTGTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000482797.1
CDS CCA 90 bp ACTGCTTGGGCCTCTGCCTGTGCGTCTCTCTCTCTAGGCAGCTGGTaGTTGGGATTGTGGCGACAGCGTACACTGAGGCCGAAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: TAWASACASLSLGSW*LGLWRQRTLRPKSL
Trigger: CAAGCTTTTCGGCCTCAGTGTACGCTGTCGCCACAATCCCAACCACCAGCTGCCTAGAGAGAGAGACGCACAGGCAGAGGCCCAAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS GCA 90 bp AGCGTGTACTCCATGATCTGGATGTCCGTGATGGGGCAGTTGCACTaGGGAAACTCCTCGGCACATTGGCAGCGACACTGGCTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: SVYSMIWMSVMGQLH*GNSSAHWQRHWLFW
Trigger: CCAGAACAGCCAGTGTCGCTGCCAATGTGCCGAGGAGTTTCCGCAGTGCAACTGCCCCATCACGGACATCCAGATCATGGAGTACACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS GCA 90 bp ATAGAACTGGCCGCCCTGTGTGTAGGACTGGTTGACCTGCTGCACTaGACTGCGCAGGAGGTCGGCGTTGAACCTCAGGCTATACCCAAA +
Preference number: 5 (lower is better)
Translates to: IELAALCVGLVDLLH*TAQEVGVEPQAIPK
Trigger: TTTGGGTATAGCCTGAGGTTCAACGCCGACCTCCTGCGCAGTGCAGTGCAGCAGGTCAACCAGTCCTACACACAGGGCGGCCAGTTCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 90 bp TTTACTGCTTGGGCCTCTGCCTGTGCGTCTCTCTCTCTAGGCAGCTaGTGGTTGGGATTGTGGCGACAGCGTACACTGAGGCCGAAAAGC +
Preference number: 5 (lower is better)
Translates to: FTAWASACASLSLGS*WLGLWRQRTLRPKS
Trigger: GCTTTTCGGCCTCAGTGTACGCTGTCGCCACAATCCCAACCACCAGCTGCCTAGAGAGAGAGACGCACAGGCAGAGGCCCAAGCAGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS GCA 90 bp CATTCTGTGGAGTCCTGGAGTCAATGTCCGTCTTTGGCGGAGAGCTaGGGGAGGACGCTTTTTATTCGGCTCGGTGGGAACTTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: HSVESWSQCPSLAES*GRTLFIRLGGNLGE
Trigger: CTCTCCCAAGTTCCCACCGAGCCGAATAAAAAGCGTCCTCCCGCAGCTCTCCGCCAAAGACGGACATTGACTCCAGGACTCCACAGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS GCA 90 bp TGCATGATCTCGGTGAGGTCTCTTTACTGCTTGGGCCTCTGCCTGTaGGTCTCTCTCTCTAGGCAGCTGGTGGTTGGGATTGTGGCGACA +
Preference number: 5 (lower is better)
Translates to: CMISVRSLYCLGLCL*VSLSRQLVVGIVAT
Trigger: TGTCGCCACAATCCCAACCACCAGCTGCCTAGAGAGAGAGACGCACAGGCAGAGGCCCAAGCAGTAAAGAGACCTCACCGAGATCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS CCA 90 bp AAAGCTTGCGGGCAGTGCGTTGGATCTTTTGTCTCTGTGCCTCCGTaGCACTCTGCAGGAGCTTGTAGCGGTTCTGCAGGTCCCAGTCAT +
Preference number: 5 (lower is better)
Translates to: KACGQCVGSFVSVPP*HSAGACSGSAGPSH
Trigger: ATGACTGGGACCTGCAGAACCGCTACAAGCTCCTGCAGAGTGCCACGGAGGCACAGAGACAAAAGATCCAACGCACTGCCCGCAAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000482797.1
CDS CCA 90 bp CTCAAAGCTGATGAACTGCTCGCTCCGCTCCGAGTCCACGTTCTGTaGTTCACAGCGGCCTCGATACAGCTTGTAGCCCTTGTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: LKADELLAPLRVHVL*FTAASIQLVALVAG
Trigger: TCCTGCAACAAGGGCTACAAGCTGTATCGAGGCCGCTGTGAACCACAGAACGTGGACTCGGAGCGGAGCGAGCAGTTCATCAGCTTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 90 bp CCAGTTGTAGCACTGGCTGTTTTGGAGACGGATCTTCTCCCAGCGTaGGTAGCCAAATTCCCCGAAGGGCATGTTCCAGCCCTCCGAATG +
Preference number: 5 (lower is better)
Translates to: PVVALAVLETDLLPA*VAKFPEGHVPALRM
Trigger: CATTCGGAGGGCTGGAACATGCCCTTCGGGGAATTTGGCTACCCACGCTGGGAGAAGATCCGTCTCCAAAACAGCCAGTGCTACAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS TCA 90 bp GAGGTCGGCGTTGAACCTCAGGCTATACCCAAACACCTGCACGTCTaGGATCTTGATGTAGAACTGCCTCTTGGAGGGATCCGACAGGTC +
Preference number: 5 (lower is better)
Translates to: EVGVEPQAIPKHLHV*DLDVELPLGGIRQV
Trigger: GACCTGTCGGATCCCTCCAAGAGGCAGTTCTACATCAAGATCTCAGACGTGCAGGTGTTTGGGTATAGCCTGAGGTTCAACGCCGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 90 bp ATTCACTGCATGATCTCGGTGAGGTCTCTTTACTGCTTGGGCCTCTaGCTGTGCGTCTCTCTCTCTAGGCAGCTGGTGGTTGGGATTGTG +
Preference number: 5 (lower is better)
Translates to: IHCMISVRSLYCLGL*LCVSLSRQLVVGIV
Trigger: CACAATCCCAACCACCAGCTGCCTAGAGAGAGAGACGCACAGGCAGAGGCCCAAGCAGTAAAGAGACCTCACCGAGATCATGCAGTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS-3UTR CAA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTCCGTGATGGGGCAGTaGCACTGCGGAAACTCCTCG +
Preference number: 5 (lower is better)
Translates to: EATPSMLHKRLRPFFMTESVMGQ*HCGNSS
Trigger: CGAGGAGTTTCCGCAGTGCAACTGCCCCATCACGGA...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGCTAGGCAGCTGGTGGTaGGGATTGTGGCGACAGCGT +
Preference number: 5 (lower is better)
Translates to: EATPSMLHKRLRPFFMTELGSWW*GLWRQR
Trigger: ACGCTGTCGCCACAATCCCAACCACCAGCTGCCTAG...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TTGTTCTGTTGTGTGTGTACAACAACAGGAAAAGTCCATGGCAAGGAGTCCCGGGTGAGGGACATGCGCTaGCGCCACCGAGGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: LFCCVCTTTGKVHGKESRVRDMR*RHRGSK
Trigger: CTTTGACCCTCGGTGGCGCAAGCGCATGTCCCTCAC...CCGGGACTCCTTGCCATGGACTTTTCCTGTTGTTGTACACACACAACAGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS TCA 90 bp GACATGTTGGTCTGTCCCAGCTGGTTCCTGGTGGGAGGGCTGCACTaGGATACGGCCCCATATAAACAGGAAGTAGAGGAGCTCAACAAA +
Preference number: 5 (lower is better)
Translates to: DMLVCPSWFLVGGLH*DTAPYKQEVEELNK
Trigger: TTTGTTGAGCTCCTCTACTTCCTGTTTATATGGGGCCGTATCTCAGTGCAGCCCTCCCACCAGGAACCAGCTGGGACAGACCAACATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS-3UTR CAA 90 bp TATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTGCGCGCCAGATCAGTTaGCAGCCGTGGGGTCCGGGA +
Preference number: 5 (lower is better)
Translates to: YYTCIWTLQSERVRVTELARQIS*QPWGPG
Trigger: TCCCGGACCCCACGGCTGCAAACTGATCTGGCGCGC...AAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGCGGCTCGGTGGGAACTaGGGAGAGCCCTGCGTGCAG +
Preference number: 5 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQRLGGN*GEPCVQ
Trigger: CTGCACGCAGGGCTCTCCCAAGTTCCCACCGAGCCG...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS TCA 90 bp AGGATAGGTAGCTCCTGGAGTGGTGGAAAGGCCCCCTGTCTGAAATaGGCCAATCAAATTCCTTGGAGACATGTTGGTCTGTCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: RIGSSWSGGKAPCLK*ANQIPWRHVGLSQL
Trigger: CAGCTGGGACAGACCAACATGTCTCCAAGGAATTTGATTGGCTCATTTCAGACAGGGGGCCTTTCCACCACTCCAGGAGCTACCTATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS-3UTR CAA 90 bp AATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAGCGCGCCAGATCAGTTaGCAGCCGTGGGGTCCGGGA +
Preference number: 5 (lower is better)
Translates to: NAPQKAETLLHDRVSIEIARQIS*QPWGPG
Trigger: TCCCGGACCCCACGGCTGCAAACTGATCTGGCGCGC...TATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGCGGCTCGGTGGGAACTaGGGAGAGCCCTGCGTGCAG +
Preference number: 5 (lower is better)
Translates to: SFCLLGTTETIHHMTTNWRLGGN*GEPCVQ
Trigger: CTGCACGCAGGGCTCTCCCAAGTTCCCACCGAGCCG...CCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp TATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCTCCGTGATGGGGCAGTaGCACTGCGGAAACTCCTCG +
Preference number: 5 (lower is better)
Translates to: YTCIWTLQSERVRVTELSSVMGQ*HCGNSS
Trigger: CGAGGAGTTTCCGCAGTGCAACTGCCCCATCACGGA...GGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGAGTGCGTTGGATCTTTaGTCTCTGTGCCTCCGTGGC +
Preference number: 5 (lower is better)
Translates to: EATPSMLHKRLRPFFMTESALDL*SLCLRG
Trigger: GCCACGGAGGCACAGAGACAAAAGATCCAACGCACT...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp ATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCCCTTGCAGCAAGCTCCCTTTCAGACTaGGCTCAAGGCCACTCATGC +
Preference number: 5 (lower is better)
Translates to: IWTLQSERVRVTELSLAASSLSD*AQGHSC
Trigger: GCATGAGTGGCCTTGAGCCAAGTCTGAAAGGGAGCT...TGCTGCAAGGGAAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS TCA 90 bp CTCATGAAGCCTCCTCATGGTACCATCACGGTCAACAAAGTAGGATaGTGCGAGCTGGTGCAGAGCTTCAACACTTTGAGTGGCATTCCC +
Preference number: 5 (lower is better)
Translates to: LMKPPHGTITVNKVG*CELVQSFNTLSGIP
Trigger: GGGAATGCCACTCAAAGTGTTGAAGCTCTGCACCAGCTCGCATCATCCTACTTTGTTGACCGTGATGGTACCATGAGGAGGCTTCATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS TCA 90 bp CTCCAGGAAGGTTCCCCAAAACCCATTCTCATTACAGTAGAGGAGTaGCTGGACCCTTGCAAGCCACTGCTGAATTGTCCTCTCTCTAGG +
Preference number: 5 (lower is better)
Translates to: LQEGSPKPILITVEE*LDPCKPLLNCPLSR
Trigger: CCTAGAGAGAGGACAATTCAGCAGTGGCTTGCAAGGGTCCAGTCACTCCTCTACTGTAATGAGAATGGGTTTTGGGGAACCTTCCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTTCCTTGGAGACATGTaGGTCTGTCCCAGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: EATPSMLHKRLRPFFMTEFLGDM*VCPSWF
Trigger: GAACCAGCTGGGACAGACCAACATGTCTCCAAGGAA...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGGCTTCGGCCCAAGACTaGGCCATGTTGGCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQASAQD*AMLASV
Trigger: CACGCTGGCCAACATGGCCAAGTCTTGGGCCGAAGC...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp ACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATAGGGTCCAGGCTGCTGTaGCGCATCTGGCAGATGCGC +
Preference number: 5 (lower is better)
Translates to: TAEIFTIHCICFLPSPPIGSRLL*RIWQMR
Trigger: GCGCATCTGCCAGATGCGCAACAGCAGCCTGGACCC...TATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 90 bp CTTGCAGCAGTCCTAATTCCAGTTAGATTAGCTCCCTTTCAGACTTaGCTCAAGGCCACTCATGCAGTGGCACTGAGTGAGACTCTCTAC +
Preference number: 5 (lower is better)
Translates to: LAAVLIPVRLAPFQT*LKATHAVALSETLY
Trigger: GTAGAGAGTCTCACTCAGTGCCACTGCATGAGTGGCCTTGAGCCAAGTCTGAAAGGGAGCTAATCTAACTGGAATTAGGACTGCTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp GCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAACACAGGCGGATGCTCCTTaGAAACTCCGGCATGAGGGG +
Preference number: 5 (lower is better)
Translates to: APQKAETLLHDRVSIEITQADAP*KLRHEG
Trigger: CCCCTCATGCCGGAGTTTCAAAGGAGCATCCGCCTG...TGTTATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp ATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCACTGAACTTTCAGGCGGATGCTCCTTaGAAACTCCGGCATGAGGGG +
Preference number: 5 (lower is better)
Translates to: IILASGHSKVKGSGSLNFQADAP*KLRHEG
Trigger: CCCCTCATGCCGGAGTTTCAAAGGAGCATCCGCCTG...AAAGTTCAGTGACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp TCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGGCTTCGGCCCAAGACTaGGCCATGTTGGCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: SFCLLGTTETIHHMTTNWASAQD*AMLASV
Trigger: CACGCTGGCCAACATGGCCAAGTCTTGGGCCGAAGC...CCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp GCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAACACACATGGCGCAGCTGTaGTTCCCGCCTATCACGCAG +
Preference number: 5 (lower is better)
Translates to: APQKAETLLHDRVSIEITHMAQL*FPPITQ
Trigger: CTGCGTGATAGGCGGGAACAACAGCTGCGCCATGTG...TGTTATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 90 bp CAAAGTAGGATGATGCGAGCTGGTGCAGAGCTTCAACACTTTGAGTaGCATTCCCTGACTTCCTGTCGAGGCGACTTTTGTCCATATACA +
Preference number: 5 (lower is better)
Translates to: QSRMMRAGAELQHFE*HSLTSCRGDFCPYT
Trigger: TGTATATGGACAAAAGTCGCCTCGACAGGAAGTCAGGGAATGCCACTCAAAGTGTTGAAGCTCTGCACCAGCTCGCATCATCCTACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS-3UTR CAA 90 bp TGTGACAGCTATTATACTTGCATCTGGACACTCCAAAGTGAAAGGGTCAGGGTCTTTGCTCTCCGTGCTTaGCAGAAGGACGGAACTCAC +
Preference number: 5 (lower is better)
Translates to: CDSYYTCIWTLQSERVRVFALRA*QKDGTH
Trigger: GTGAGTTCCGTCCTTCTGCAAAGCACGGAGAGCAAA...GACCCTGACCCTTTCACTTTGGAGTGTCCAGATGCAAGTATAATAGCTGTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp AACATGCCCAACGCTTTTATACAGTTGCTAGAACGTTTTCATTTCCAACAAATGCCGCAGAGGGAGATGTaGGCCAGGCTGCACATGGCG +
Preference number: 5 (lower is better)
Translates to: NMPNAFIQLLERFHFQQMPQREM*ARLHMA
Trigger: CGCCATGTGCAGCCTGGCCAACATCTCCCTCTGCGG...CATTTGTTGGAAATGAAAACGTTCTAGCAACTGTATAAAAGCGTTGGGCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGTCGAGGCGGATCTCGTaGCTGATGAAGGTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQSRRIS*LMKVVW
Trigger: CCACACCACCTTCATCAGCAACGAGATCCGCCTCGA...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TTGTTCTGTTGTGTGTGTACAACAACAGGAAAAGTCCATGGCAAGGAGTCCCGGATCTGGTCCGACTGTTaGAGGATCTCCGTGTTGTAC +
Preference number: 5 (lower is better)
Translates to: LFCCVCTTTGKVHGKESRIWSDC*RISVLY
Trigger: GTACAACACGGAGATCCTCAAACAGTCGGACCAGAT...CCGGGACTCCTTGCCATGGACTTTTCCTGTTGTTGTACACACACAACAGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp GAAGCAACTCCCTCAATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGGATTATCTGAAGACCTaGAAGGTGCAGTTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: EATPSMLHKRLRPFFMTEDYLKT*KVQFAL
Trigger: GAGAGCAAACTGCACCTTCAAGGTCTTCAGATAATC...CTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGCAAGACTTGGCCATGTaGGCCAGCGTGTACTCCATG +
Preference number: 5 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQQDLAM*ASVYSM
Trigger: CATGGAGTACACGCTGGCCAACATGGCCAAGTCTTG...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp AACATGCCCAACGCTTTTATACAGTTGCTAGAACGTTTTCATTTCCAACAAATGAGTCAATGTCCGTCTTaGGCGGAGAGCTGCGGGAGG +
Preference number: 5 (lower is better)
Translates to: NMPNAFIQLLERFHFQQMSQCPS*AESCGR
Trigger: CCTCCCGCAGCTCTCCGCCAAAGACGGACATTGACT...CATTTGTTGGAAATGAAAACGTTCTAGCAACTGTATAAAAGCGTTGGGCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp GCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACAGTTTGCTCTCCGTGCTTaGCAGAAGGACGGAACTCAC +
Preference number: 5 (lower is better)
Translates to: AEIFTIHCICFLPSPPIQFALRA*QKDGTH
Trigger: GTGAGTTCCGTCCTTCTGCAAAGCACGGAGAGCAAA...CTGTATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp ACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATAAAACTCCTCGGCACATaGGCAGCGACACTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: TAEIFTIHCICFLPSPPIKLLGT*AATLAV
Trigger: AACAGCCAGTGTCGCTGCCAATGTGCCGAGGAGTTT...TATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGAAACTCCTCGGCACATaGGCAGCGACACTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: SFCLLGTTETIHHMTTNWKLLGT*AATLAV
Trigger: AACAGCCAGTGTCGCTGCCAATGTGCCGAGGAGTTT...CCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp AACATGCCCAACGCTTTTATACAGTTGCTAGAACGTTTTCATTTCCAACAAATGCTGAGGCCGAAAAGCTaGCGGGCAGTGCGTTGGATC +
Preference number: 5 (lower is better)
Translates to: NMPNAFIQLLERFHFQQMLRPKS*RAVRWI
Trigger: GATCCAACGCACTGCCCGCAAGCTTTTCGGCCTCAG...CATTTGTTGGAAATGAAAACGTTCTAGCAACTGTATAAAAGCGTTGGGCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCCGCAGGAGGTCGGCGTaGAACCTCAGGCTATACCCA +
Preference number: 5 (lower is better)
Translates to: LILAPAQQRSLQFIAYAFRRRSA*NLRLYP
Trigger: TGGGTATAGCCTGAGGTTCAACGCCGACCTCCTGCG...GAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 90 bp AGTCAAAATGTTTTCAATCTTGCCTTGTCTCTGCAATTGATTCACTaGATGATCTCGGTGAGGTCTCTTTACTGCTTGGGCCTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SQNVFNLALSLQLIH*MISVRSLYCLGLCL
Trigger: CAGGCAGAGGCCCAAGCAGTAAAGAGACCTCACCGAGATCATGCAGTGAATCAATTGCAGAGACAAGGCAAGATTGAAAACATTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS-3UTR CAA 90 bp TCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGTTCCTTGGAGACATGTaGGTCTGTCCCAGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: SFCLLGTTETIHHMTTNWFLGDM*VCPSWF
Trigger: GAACCAGCTGGGACAGACCAACATGTCTCCAAGGAA...CCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp CTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGATTATCAAGACTTGGCCATGTaGGCCAGCGTGTACTCCATG +
Preference number: 5 (lower is better)
Translates to: LSSGYDRNNTSYDHKLDYQDLAM*ASVYSM
Trigger: CATGGAGTACACGCTGGCCAACATGGCCAAGTCTTG...ATAATCCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp GCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAACAAAGTCCATGCGGTTCTaGTTGCTCTTGAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: APQKAETLLHDRVSIEITKSMRF*LLLRVR
Trigger: CCTCACTCTCAAGAGCAACAAGAACCGCATGGACTT...TGTTATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp ACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATACTGATGATCTCGCTGTaGGTCAGTTTCAGGCGGTGT +
Preference number: 5 (lower is better)
Translates to: TAEIFTIHCICFLPSPPILMISL*VSFRRC
Trigger: ACACCGCCTGAAACTGACCAACAGCGAGATCATCAG...TATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TTTTTAGTGTTTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCAGCTGGTGGTTGGGATaGTGGCGACAGCGTACACTG +
Preference number: 5 (lower is better)
Translates to: FLVFNLSTCTAEIFTIHCSWWLG*WRQRTL
Trigger: CAGTGTACGCTGTCGCCACAATCCCAACCACCAGCT...GCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAAACACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp AACATGCCCAACGCTTTTATACAGTTGCTAGAACGTTTTCATTTCCAACAAATGGGAGTGACTGGACCCTaGCAAGCCACTGCTGAATTG +
Preference number: 5 (lower is better)
Translates to: NMPNAFIQLLERFHFQQMGVTGP*QATAEL
Trigger: CAATTCAGCAGTGGCTTGCAAGGGTCCAGTCACTCC...CATTTGTTGGAAATGAAAACGTTCTAGCAACTGTATAAAAGCGTTGGGCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTTGAGGATCTCCGTGTaGTACAGGTCCAAGGCGTGG +
Preference number: 5 (lower is better)
Translates to: LILAPAQQRSLQFIAYAFLRISV*YRSKAW
Trigger: CCACGCCTTGGACCTGTACAACACGGAGATCCTCAA...GAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp GCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAACAAGCCAATCAAATTCCTaGGAGACATGTTGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: APQKAETLLHDRVSIEITSQSNS*ETCWSV
Trigger: GACAGACCAACATGTCTCCAAGGAATTTGATTGGCT...TGTTATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTCTTGCGGGCAGTGCGTaGGATCTTTTGTCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: SSKKEKWQCQLYITYISLLAGSA*DLLSLC
Trigger: GCACAGAGACAAAAGATCCAACGCACTGCCCGCAAG...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTCTTCGGTTCTTGTTGCTCTaGAGAGTGAGGGACATGCGC +
Preference number: 5 (lower is better)
Translates to: SSKKEKWQCQLYITYISLRFLLL*RVRDMR
Trigger: GCGCATGTCCCTCACTCTCAAGAGCAACAAGAACCG...AAGAGAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp AACATGCCCAACGCTTTTATACAGTTGCTAGAACGTTTTCATTTCCAACAAATGTCCATGCGGTTCTTGTaGCTCTTGAGAGTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: NMPNAFIQLLERFHFQQMSMRFL*LLRVRD
Trigger: GTCCCTCACTCTCAAGAGCAACAAGAACCGCATGGA...CATTTGTTGGAAATGAAAACGTTCTAGCAACTGTATAAAAGCGTTGGGCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGAGCCAATCAAATTCCTaGGAGACATGTTGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: SFCLLGTTETIHHMTTNWSQSNS*ETCWSV
Trigger: GACAGACCAACATGTCTCCAAGGAATTTGATTGGCT...CCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp ACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTCCCTTCTCCCCCAATATGGGTGCCGTACTTTTaGATGATGGTATCGATGAAC +
Preference number: 5 (lower is better)
Translates to: TAEIFTIHCICFLPSPPIWVPYF*MMVSMN
Trigger: GTTCATCGATACCATCATCAAAAAGTACGGCACCCA...TATTGGGGGAGAAGGGAGAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp AATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATACTGTCGAGGCGACTTTaGTCCATATACATGGTCAAA +
Preference number: 5 (lower is better)
Translates to: NAPQKAETLLHDRVSIEILSRRL*SIYMVK
Trigger: TTTGACCATGTATATGGACAAAAGTCGCCTCGACAG...TATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TTTTTAGTGTTTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCGTAGCACTGGCTGTTTaGGAGACGGATCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: FLVFNLSTCTAEIFTIHCVALAV*ETDLLP
Trigger: TGGGAGAAGATCCGTCTCCAAAACAGCCAGTGCTAC...GCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAAACACTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGTCTGGTTGTAAATCCTaGACGGTGTCTTTCCACAAA +
Preference number: 5 (lower is better)
Translates to: SFCLLGTTETIHHMTTNWSGCKS*TVSFHK
Trigger: TTTGTGGAAAGACACCGTCAAGGATTTACAACCAGA...CCAGTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS CCA 90 bp TTAATCAGCTTATTAGAGAGTTCCACATACCATAAAGCTGTTATATaGCAGCAAATCCCAGCTGCTGTGAAGAGTTTCTTGCAATGTGAC +
Preference number: 5 (lower is better)
Translates to: LISLLESSTYHKAVI*QQIPAAVKSFLQCD
Trigger: GTCACATTGCAAGAAACTCTTCACAGCAGCTGGGATTTGCTGCCATATAACAGCTTTATGGTATGTGGAACTCTCTAATAAGCTGATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS-3UTR CAA 90 bp TATTCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTTTTTCCTCTCATTCTaGCTCCATTCTGTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: YSFCLLGTTETIHHMTTNFFLSF*LHSVES
Trigger: GGACTCCACAGAATGGAGCAAGAATGAGAGGAAAAA...GTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp TATTCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACTGGGTGCCGTACTTTTaGATGATGGTATCGATGAAC +
Preference number: 5 (lower is better)
Translates to: YSFCLLGTTETIHHMTTNWVPYF*MMVSMN
Trigger: GTTCATCGATACCATCATCAAAAAGTACGGCACCCA...GTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp TATTCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACCTGTCGAGGCGACTTTaGTCCATATACATGGTCAAA +
Preference number: 5 (lower is better)
Translates to: YSFCLLGTTETIHHMTTNLSRRL*SIYMVK
Trigger: TTTGACCATGTATATGGACAAAAGTCGCCTCGACAG...GTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp TATTCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACGATTATCTGAAGACCTaGAAGGTGCAGTTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: YSFCLLGTTETIHHMTTNDYLKT*KVQFAL
Trigger: GAGAGCAAACTGCACCTTCAAGGTCTTCAGATAATC...GTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp CATTTCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCTTTTTCCTCTCATTCTaGCTCCATTCTGTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: HFLQKGKMAVSVVHYIYLFFLSF*LHSVES
Trigger: GGACTCCACAGAATGGAGCAAGAATGAGAGGAAAAA...GAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCATATGCTTTCTCTGGTTGTAAATCCTaGACGGTGTCTTTCCACAAA +
Preference number: 5 (lower is better)
Translates to: LILAPAQQRSLQFIAYAFSGCKS*TVSFHK
Trigger: TTTGTGGAAAGACACCGTCAAGGATTTACAACCAGA...GAAAGCATATGCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TATTCTTTCTGTCTTCTGGGTACGACAGAAACAATACATCATATGACCACAAACCTGGACAAACTTCTCTaGCAGATACTGAGGAAAGAT +
Preference number: 5 (lower is better)
Translates to: YSFCLLGTTETIHHMTTNLDKLL*QILRKD
Trigger: ATCTTTCCTCAGTATCTGCAAGAGAAGTTTGTCCAG...GTTTGTGGTCATATGATGTATTGTTTCTGTCGTACCCAGAAGACAGAAAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS-3UTR CAA 90 bp AATGCTCCACAAAAGGCTGAGACCCTTCTTCATGACAGAGTGAGTATAGAAATAGATCTTTACAATTCATaGCATATGCTTTCTCCCTTC +
Preference number: 5 (lower is better)
Translates to: NAPQKAETLLHDRVSIEIDLYNS*HMLSPF
Trigger: GAAGGGAGAAAGCATATGCAATGAATTGTAAAGATC...TATTTCTATACTCACTCTGTCATGAAGAAGGGTCTCAGCCTTTTGTGGAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp CATTTCCTCCAAAAAGGAAAAATGGCAGTGTCAGTTGTACATTACATATATCTCCTGGACAAACTTCTCTaGCAGATACTGAGGAAAGAT +
Preference number: 5 (lower is better)
Translates to: HFLQKGKMAVSVVHYIYLLDKLL*QILRKD
Trigger: ATCTTTCCTCAGTATCTGCAAGAGAAGTTTGTCCAG...GAGATATATGTAATGTACAACTGACACTGCCATTTTTCCTTTTTGGAGGAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS-3UTR CAA 90 bp TTTTTAGTGTTTAATCTTAGCACCTGCACAGCAGAGATCTTTACAATTCATTGCCTTCATTTTGTTCTGTaGTGTGTGTACAACAACAGG +
Preference number: 5 (lower is better)
Translates to: FLVFNLSTCTAEIFTIHCLHFVL*CVYNNR
Trigger: CCTGTTGTTGTACACACACAACAGAACAAAATGAAG...GCAATGAATTGTAAAGATCTCTGCTGTGCAGGTGCTAAGATTAAACACTAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 72 bp CCTGCGCTCTCCTCCTCCCCGCGCGCCAGATCAGTTTaGAGCCGTGGGGTCCGGGAGCGAGGCGGCTGGCGA +
Preference number: 6 (lower is better)
Translates to: PALSSSPRARSV*SRGVRERGGWR
Trigger: TCGCCAGCCGCCTCGCTCCCGGACCCCACGGCTGCAAACTGATCTGGCGCGCGGGGAGGAGGAGAGCGCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 72 bp TGCGTGCAGCTCGCATTCCGGGCACGGCGCGGGGACTaGAGGCGTGGGGGTACCTGGCTCCTAGCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: CVQLAFRARRGD*RRGGTWLLAAW
Trigger: CCAGGCTGCTAGGAGCCAGGTACCCCCACGCCTGCAGTCCCCGCGCCGTGCCCGGAATGCGAGCTGCACGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS GCA 72 bp TCACGCAGGGGATGGGGCGCTGGCACAGCGTGGTGCTaGCGTGGCACACGCAGCTCCGCTGGCTCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: SRRGWGAGTAWC*RGTRSSAGSPG
Trigger: TCCTGGAGAGCCAGCGGAGCTGCGTGTGCCACGGCAGCACCACGCTGTGCCAGCGCCCCATCCCCTGCGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 72 bp CGCCTATCACGCAGGGGATGGGGCGCTGGCACAGCGTaGTGCTGCCGTGGCACACGCAGCTCCGCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: RLSRRGWGAGTA*CCRGTRSSAGS
Trigger: AGAGCCAGCGGAGCTGCGTGTGCCACGGCAGCACCACGCTGTGCCAGCGCCCCATCCCCTGCGTGATAGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 72 bp CTATCACGCAGGGGATGGGGCGCTGGCACAGCGTGGTaGTGCCGTGGCACACGCAGCTCCGCTGGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: LSRRGWGAGTAW*CRGTRSSAGSP
Trigger: TGGAGAGCCAGCGGAGCTGCGTGTGCCACGGCAGCACCACGCTGTGCCAGCGCCCCATCCCCTGCGTGATAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 72 bp CAGGGGATGGGGCGCTGGCACAGCGTGGTGCTGCCGTaGCACACGCAGCTCCGCTGGCTCTCCAGGAAGGTT +
Preference number: 6 (lower is better)
Translates to: QGMGRWHSVVLP*HTQLRWLSRKV
Trigger: AACCTTCCTGGAGAGCCAGCGGAGCTGCGTGTGCCACGGCAGCACCACGCTGTGCCAGCGCCCCATCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CAA 90 bp GCGGAGAGCTGCGGGAGGACGCTTTTTATTCGGCTCGGTGGGAACTaGGGAGAGCCCTGCGTGCAGCTCGCATTCCGGGCACGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: AESCGRTLFIRLGGN*GEPCVQLAFRARRG
Trigger: CCCGCGCCGTGCCCGGAATGCGAGCTGCACGCAGGGCTCTCCCAAGTTCCCACCGAGCCGAATAAAAAGCGTCCTCCCGCAGCTCTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CCA 72 bp CGGGCACGGCGCGGGGACTGCAGGCGTGGGGGTACCTaGCTCCTAGCAGCCTGGCTCATACTCAGCCGTAAA +
Preference number: 6 (lower is better)
Translates to: RARRGDCRRGGT*LLAAWLILSRK
Trigger: TTTACGGCTGAGTATGAGCCAGGCTGCTAGGAGCCAGGTACCCCCACGCCTGCAGTCCCCGCGCCGTGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CCA 72 bp CTGTTGTTCCCGCCTATCACGCAGGGGATGGGGCGCTaGCACAGCGTGGTGCTGCCGTGGCACACGCAGCTC +
Preference number: 6 (lower is better)
Translates to: LLFPPITQGMGR*HSVVLPWHTQL
Trigger: GAGCTGCGTGTGCCACGGCAGCACCACGCTGTGCCAGCGCCCCATCCCCTGCGTGATAGGCGGGAACAACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 72 bp TGGCGCAGCTGTTGTTCCCGCCTATCACGCAGGGGATaGGGCGCTGGCACAGCGTGGTGCTGCCGTGGCACA +
Preference number: 6 (lower is better)
Translates to: WRSCCSRLSRRG*GAGTAWCCRGT
Trigger: TGTGCCACGGCAGCACCACGCTGTGCCAGCGCCCCATCCCCTGCGTGATAGGCGGGAACAACAGCTGCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CAA 72 bp CTCTGCCTCCCGGCTCTCTCGCTCTCGCTCTCGCTGTaGCTCGCTCGCTCTCTCCCTCTCTCGCGGGTTCGC +
Preference number: 6 (lower is better)
Translates to: LCLPALSLSLSL*LARSLPLSRVR
Trigger: GCGAACCCGCGAGAGAGGGAGAGAGCGAGCGAGCAACAGCGAGAGCGAGAGCGAGAGAGCCGGGAGGCAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 90 bp GAGCCGCAGAGGGAGATGTTGGCCAGGCTGCACATGGCGCAGCTGTaGTTCCCGCCTATCACGCAGGGGATGGGGCGCTGGCACAGCGTG +
Preference number: 6 (lower is better)
Translates to: EPQREMLARLHMAQL*FPPITQGMGRWHSV
Trigger: CACGCTGTGCCAGCGCCCCATCCCCTGCGTGATAGGCGGGAACAACAGCTGCGCCATGTGCAGCCTGGCCAACATCTCCCTCTGCGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 72 bp TTATTCGGCTCGGTGGGAACTTGGGAGAGCCCTGCGTaGAGCTCGCATTCCGGGCACGGCGCGGGGACTGCA +
Preference number: 6 (lower is better)
Translates to: LFGSVGTWESPA*SSHSGHGAGTA
Trigger: TGCAGTCCCCGCGCCGTGCCCGGAATGCGAGCTGCACGCAGGGCTCTCCCAAGTTCCCACCGAGCCGAATAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS GCA 72 bp CTTTTTATTCGGCTCGGTGGGAACTTGGGAGAGCCCTaGGTGCAGCTCGCATTCCGGGCACGGCGCGGGGAC +
Preference number: 6 (lower is better)
Translates to: LFIRLGGNLGEP*VQLAFRARRGD
Trigger: GTCCCCGCGCCGTGCCCGGAATGCGAGCTGCACGCAGGGCTCTCCCAAGTTCCCACCGAGCCGAATAAAAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 72 bp AGGGAGATGTTGGCCAGGCTGCACATGGCGCAGCTGTaGTTCCCGCCTATCACGCAGGGGATGGGGCGCTGG +
Preference number: 6 (lower is better)
Translates to: REMLARLHMAQL*FPPITQGMGRW
Trigger: CCAGCGCCCCATCCCCTGCGTGATAGGCGGGAACAACAGCTGCGCCATGTGCAGCCTGGCCAACATCTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 72 bp GCCGCCCTGTGTGTAGGACTGGTTGACCTGCTGCACTaGACTGCGCAGGAGGTCGGCGTTGAACCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: AALCVGLVDLLH*TAQEVGVEPQA
Trigger: AGCCTGAGGTTCAACGCCGACCTCCTGCGCAGTGCAGTGCAGCAGGTCAACCAGTCCTACACACAGGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CAA 90 bp GATGTCCGTGATGGGGCAGTTGCACTGCGGAAACTCCTCGGCACATaGGCAGCGACACTGGCTGTTCTGGCACAGGTACTCCCCCTCCCC +
Preference number: 6 (lower is better)
Translates to: DVRDGAVALRKLLGT*AATLAVLAQVLPLP
Trigger: GGGGAGGGGGAGTACCTGTGCCAGAACAGCCAGTGTCGCTGCCAATGTGCCGAGGAGTTTCCGCAGTGCAACTGCCCCATCACGGACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS TCA 72 bp GTGGTAGGTCTCCTGCCAAGCAGGCGGATGCTCCTTTaGAACTCCGGCATGAGGGGCACTGGATGGCGGACC +
Preference number: 6 (lower is better)
Translates to: VVGLLPSRRMLL*NSGMRGTGWRT
Trigger: GGTCCGCCATCCAGTGCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGCCTGCTTGGCAGGAGACCTACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CCA 72 bp GACTGCAGGCGTGGGGGTACCTGGCTCCTAGCAGCCTaGCTCATACTCAGCCGTAAAGTCCCCTTCGCTGGT +
Preference number: 6 (lower is better)
Translates to: DCRRGGTWLLAA*LILSRKVPFAG
Trigger: ACCAGCGAAGGGGACTTTACGGCTGAGTATGAGCCAGGCTGCTAGGAGCCAGGTACCCCCACGCCTGCAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CCA 72 bp CACAGCGTGGTGCTGCCGTGGCACACGCAGCTCCGCTaGCTCTCCAGGAAGGTTCCCCAAAACCCATTCTCA +
Preference number: 6 (lower is better)
Translates to: HSVVLPWHTQLR*LSRKVPQNPFS
Trigger: TGAGAATGGGTTTTGGGGAACCTTCCTGGAGAGCCAGCGGAGCTGCGTGTGCCACGGCAGCACCACGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 72 bp TGCCTCTTGGAGGGATCCGACAGGTCCACGGGGCCCTaGCCAGTCTCATTTCGCAGTAGGGTAGGTAGCCGA +
Preference number: 6 (lower is better)
Translates to: CLLEGSDRSTGP*PVSFRSRVGSR
Trigger: TCGGCTACCTACCCTACTGCGAAATGAGACTGGCCAGGGCCCCGTGGACCTGTCGGATCCCTCCAAGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 72 bp GCCTCTGCCTGTGCGTCTCTCTCTCTAGGCAGCTGGTaGTTGGGATTGTGGCGACAGCGTACACTGAGGCCG +
Preference number: 6 (lower is better)
Translates to: ASACASLSLGSW*LGLWRQRTLRP
Trigger: CGGCCTCAGTGTACGCTGTCGCCACAATCCCAACCACCAGCTGCCTAGAGAGAGAGACGCACAGGCAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS CAA 72 bp TGCGGGAGGACGCTTTTTATTCGGCTCGGTGGGAACTaGGGAGAGCCCTGCGTGCAGCTCGCATTCCGGGCA +
Preference number: 6 (lower is better)
Translates to: CGRTLFIRLGGN*GEPCVQLAFRA
Trigger: TGCCCGGAATGCGAGCTGCACGCAGGGCTCTCCCAAGTTCCCACCGAGCCGAATAAAAAGCGTCCTCCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 90 bp GCCTCTGCCTGTGCGTCTCTCTCTCTAGGCAGCTGGTGGTTGGGATaGTGGCGACAGCGTACACTGAGGCCGAAAAGCTTGCGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: ASACASLSLGSWWLG*WRQRTLRPKSLRAV
Trigger: CACTGCCCGCAAGCTTTTCGGCCTCAGTGTACGCTGTCGCCACAATCCCAACCACCAGCTGCCTAGAGAGAGAGACGCACAGGCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS CAA 90 bp GCTTGGGCCTCTGCCTGTGCGTCTCTCTCTCTAGGCAGCTGGTGGTaGGGATTGTGGCGACAGCGTACACTGAGGCCGAAAAGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: AWASACASLSLGSWW*GLWRQRTLRPKSLR
Trigger: CCGCAAGCTTTTCGGCCTCAGTGTACGCTGTCGCCACAATCCCAACCACCAGCTGCCTAGAGAGAGAGACGCACAGGCAGAGGCCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS GCA 72 bp GTTCACAGCGGCCTCGATACAGCTTGTAGCCCTTGTTaGAGGAGCCGCAGAGGGAGATGTTGGCCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: VHSGLDTACSPC*RSRRGRCWPGC
Trigger: GCAGCCTGGCCAACATCTCCCTCTGCGGCTCCTGCAACAAGGGCTACAAGCTGTATCGAGGCCGCTGTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 72 bp GGAGAGCTGCGGGAGGACGCTTTTTATTCGGCTCGGTaGGAACTTGGGAGAGCCCTGCGTGCAGCTCGCATT +
Preference number: 6 (lower is better)
Translates to: GELREDAFYSAR*ELGRALRAARI
Trigger: AATGCGAGCTGCACGCAGGGCTCTCCCAAGTTCCCACCGAGCCGAATAAAAAGCGTCCTCCCGCAGCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 72 bp AGTGGTAGGTCTCCTGCCAAGCAGGCGGATGCTCCTTaGAAACTCCGGCATGAGGGGCACTGGATGGCGGAC +
Preference number: 6 (lower is better)
Translates to: SGRSPAKQADAP*KLRHEGHWMAD
Trigger: GTCCGCCATCCAGTGCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGCCTGCTTGGCAGGAGACCTACCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS TCA 72 bp TGCCAAGCAGGCGGATGCTCCTTTGAAACTCCGGCATaGGGGGCACTGGATGGCGGACCAGATCTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: CQAGGCSFETPA*GALDGGPDLSS
Trigger: AGAGGAGAGATCTGGTCCGCCATCCAGTGCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGCCTGCTTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS TCA 72 bp GCAGCTGGTGGTTGGGATTGTGGCGACAGCGTACACTaGGGCCGAAAAGCTTGCGGGCAGTGCGTTGGATCT +
Preference number: 6 (lower is better)
Translates to: AAGGWDCGDSVH*GRKACGQCVGS
Trigger: AGATCCAACGCACTGCCCGCAAGCTTTTCGGCCTCAGTGTACGCTGTCGCCACAATCCCAACCACCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000482797.1
CDS GCA 72 bp TCTGCAGGTCCCAGTCATTGCCCCAGTGCTGATGGATaGTTCCGATGGTCAGGAAGTGGTTGCTGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: SAGPSHCPSADG*FRWSGSGCWGG
Trigger: GCCTCCCCAGCAACCACTTCCTGACCATCGGAAGCATCCATCAGCACTGGGGCAATGACTGGGACCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 72 bp GCGGATGCTCCTTTGAAACTCCGGCATGAGGGGCACTaGATGGCGGACCAGATCTCTCCTCTCGATGGCTGT +
Preference number: 6 (lower is better)
Translates to: ADAPLKLRHEGH*MADQISPLDGC
Trigger: ACAGCCATCGAGAGGAGAGATCTGGTCCGCCATCCAGTGCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CCA 72 bp ATGGGGCAGTTGCACTGCGGAAACTCCTCGGCACATTaGCAGCGACACTGGCTGTTCTGGCACAGGTACTCC +
Preference number: 6 (lower is better)
Translates to: MGQLHCGNSSAH*QRHWLFWHRYS
Trigger: GGAGTACCTGTGCCAGAACAGCCAGTGTCGCTGCCAATGTGCCGAGGAGTTTCCGCAGTGCAACTGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 72 bp GATGGGGCAGTTGCACTGCGGAAACTCCTCGGCACATaGGCAGCGACACTGGCTGTTCTGGCACAGGTACTC +
Preference number: 6 (lower is better)
Translates to: DGAVALRKLLGT*AATLAVLAQVL
Trigger: GAGTACCTGTGCCAGAACAGCCAGTGTCGCTGCCAATGTGCCGAGGAGTTTCCGCAGTGCAACTGCCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 90 bp GAACTGCTGAGTGGTAGGTCTCCTGCCAAGCAGGCGGATGCTCCTTaGAAACTCCGGCATGAGGGGCACTGGATGGCGGACCAGATCTCT +
Preference number: 6 (lower is better)
Translates to: ELLSGRSPAKQADAP*KLRHEGHWMADQIS
Trigger: AGAGATCTGGTCCGCCATCCAGTGCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGCCTGCTTGGCAGGAGACCTACCACTCAGCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 90 bp TTGGCCAGCGTGTACTCCATGATCTGGATGTCCGTGATGGGGCAGTaGCACTGCGGAAACTCCTCGGCACATTGGCAGCGACACTGGCTG +
Preference number: 6 (lower is better)
Translates to: LASVYSMIWMSVMGQ*HCGNSSAHWQRHWL
Trigger: CAGCCAGTGTCGCTGCCAATGTGCCGAGGAGTTTCCGCAGTGCAACTGCCCCATCACGGACATCCAGATCATGGAGTACACGCTGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 90 bp GTGGCGACAGCGTACACTGAGGCCGAAAAGCTTGCGGGCAGTGCGTaGGATCTTTTGTCTCTGTGCCTCCGTGGCACTCTGCAGGAGCTT +
Preference number: 6 (lower is better)
Translates to: VATAYTEAEKLAGSA*DLLSLCLRGTLQEL
Trigger: AAGCTCCTGCAGAGTGCCACGGAGGCACAGAGACAAAAGATCCAACGCACTGCCCGCAAGCTTTTCGGCCTCAGTGTACGCTGTCGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000482797.1
CDS CAA 90 bp GCGTACACTGAGGCCGAAAAGCTTGCGGGCAGTGCGTTGGATCTTTaGTCTCTGTGCCTCCGTGGCACTCTGCAGGAGCTTGTAGCGGTT +
Preference number: 6 (lower is better)
Translates to: AYTEAEKLAGSALDL*SLCLRGTLQELVAV
Trigger: AACCGCTACAAGCTCCTGCAGAGTGCCACGGAGGCACAGAGACAAAAGATCCAACGCACTGCCCGCAAGCTTTTCGGCCTCAGTGTACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000482797.1
CDS CAA 90 bp TGGTGGTTGGGATTGTGGCGACAGCGTACACTGAGGCCGAAAAGCTaGCGGGCAGTGCGTTGGATCTTTTGTCTCTGTGCCTCCGTGGCA +
Preference number: 6 (lower is better)
Translates to: WWLGLWRQRTLRPKS*RAVRWIFCLCASVA
Trigger: TGCCACGGAGGCACAGAGACAAAAGATCCAACGCACTGCCCGCAAGCTTTTCGGCCTCAGTGTACGCTGTCGCCACAATCCCAACCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000482797.1
CDS CAA 90 bp CGCATGGACATGCCGATCACCATGTGGATGAAGTCCATGCGGTTCTaGTTGCTCTTGAGAGTGAGGGACATGCGCTTGCGCCACCGAGGG +
Preference number: 6 (lower is better)
Translates to: RMDMPITMWMKSMRF*LLLRVRDMRLRHRG
Trigger: CCCTCGGTGGCGCAAGCGCATGTCCCTCACTCTCAAGAGCAACAAGAACCGCATGGACTTCATCCACATGGTGATCGGCATGTCCATGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 72 bp GAGTCCTGGAGTCAATGTCCGTCTTTGGCGGAGAGCTaGGGGAGGACGCTTTTTATTCGGCTCGGTGGGAAC +
Preference number: 6 (lower is better)
Translates to: ESWSQCPSLAES*GRTLFIRLGGN
Trigger: GTTCCCACCGAGCCGAATAAAAAGCGTCCTCCCGCAGCTCTCCGCCAAAGACGGACATTGACTCCAGGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS GCA 72 bp TCCATGATCTGGATGTCCGTGATGGGGCAGTTGCACTaGGGAAACTCCTCGGCACATTGGCAGCGACACTGG +
Preference number: 6 (lower is better)
Translates to: SMIWMSVMGQLH*GNSSAHWQRHW
Trigger: CCAGTGTCGCTGCCAATGTGCCGAGGAGTTTCCGCAGTGCAACTGCCCCATCACGGACATCCAGATCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CCA 72 bp GGGCAGTGCGTTGGATCTTTTGTCTCTGTGCCTCCGTaGCACTCTGCAGGAGCTTGTAGCGGTTCTGCAGGT +
Preference number: 6 (lower is better)
Translates to: GQCVGSFVSVPP*HSAGACSGSAG
Trigger: ACCTGCAGAACCGCTACAAGCTCCTGCAGAGTGCCACGGAGGCACAGAGACAAAAGATCCAACGCACTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000482797.1
CDS CCA 72 bp CGTACACTGAGGCCGAAAAGCTTGCGGGCAGTGCGTTaGATCTTTTGTCTCTGTGCCTCCGTGGCACTCTGC +
Preference number: 6 (lower is better)
Translates to: RTLRPKSLRAVR*IFCLCASVALC
Trigger: GCAGAGTGCCACGGAGGCACAGAGACAAAAGATCCAACGCACTGCCCGCAAGCTTTTCGGCCTCAGTGTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000482797.1
CDS CCA 72 bp GATGAACTGCTCGCTCCGCTCCGAGTCCACGTTCTGTaGTTCACAGCGGCCTCGATACAGCTTGTAGCCCTT +
Preference number: 6 (lower is better)
Translates to: DELLAPLRVHVL*FTAASIQLVAL
Trigger: AAGGGCTACAAGCTGTATCGAGGCCGCTGTGAACCACAGAACGTGGACTCGGAGCGGAGCGAGCAGTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CCA 72 bp GCACTGGCTGTTTTGGAGACGGATCTTCTCCCAGCGTaGGTAGCCAAATTCCCCGAAGGGCATGTTCCAGCC +
Preference number: 6 (lower is better)
Translates to: ALAVLETDLLPA*VAKFPEGHVPA
Trigger: GGCTGGAACATGCCCTTCGGGGAATTTGGCTACCCACGCTGGGAGAAGATCCGTCTCCAAAACAGCCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CAA 72 bp GAGGCCGAAAAGCTTGCGGGCAGTGCGTTGGATCTTTaGTCTCTGTGCCTCCGTGGCACTCTGCAGGAGCTT +
Preference number: 6 (lower is better)
Translates to: EAEKLAGSALDL*SLCLRGTLQEL
Trigger: AAGCTCCTGCAGAGTGCCACGGAGGCACAGAGACAAAAGATCCAACGCACTGCCCGCAAGCTTTTCGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000482797.1
CDS CAA 72 bp GCGTACACTGAGGCCGAAAAGCTTGCGGGCAGTGCGTaGGATCTTTTGTCTCTGTGCCTCCGTGGCACTCTG +
Preference number: 6 (lower is better)
Translates to: AYTEAEKLAGSA*DLLSLCLRGTL
Trigger: CAGAGTGCCACGGAGGCACAGAGACAAAAGATCCAACGCACTGCCCGCAAGCTTTTCGGCCTCAGTGTACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000482797.1
CDS CAA 72 bp TTGACCTGCTGCACTGCACTGCGCAGGAGGTCGGCGTaGAACCTCAGGCTATACCCAAACACCTGCACGTCT +
Preference number: 6 (lower is better)
Translates to: LTCCTALRRRSA*NLRLYPNTCTS
Trigger: AGACGTGCAGGTGTTTGGGTATAGCCTGAGGTTCAACGCCGACCTCCTGCGCAGTGCAGTGCAGCAGGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CAA 72 bp TCTGCCTGTGCGTCTCTCTCTCTAGGCAGCTGGTGGTaGGGATTGTGGCGACAGCGTACACTGAGGCCGAAA +
Preference number: 6 (lower is better)
Translates to: SACASLSLGSWW*GLWRQRTLRPK
Trigger: TTTCGGCCTCAGTGTACGCTGTCGCCACAATCCCAACCACCAGCTGCCTAGAGAGAGAGACGCACAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS TCA 72 bp GTCTGTCCCAGCTGGTTCCTGGTGGGAGGGCTGCACTaGGATACGGCCCCATATAAACAGGAAGTAGAGGAG +
Preference number: 6 (lower is better)
Translates to: VCPSWFLVGGLH*DTAPYKQEVEE
Trigger: CTCCTCTACTTCCTGTTTATATGGGGCCGTATCTCAGTGCAGCCCTCCCACCAGGAACCAGCTGGGACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS GCA 72 bp AAGCTTGCGGGCAGTGCGTTGGATCTTTTGTCTCTGTaGCTCCGTGGCACTCTGCAGGAGCTTGTAGCGGTT +
Preference number: 6 (lower is better)
Translates to: KLAGSALDLLSL*LRGTLQELVAV
Trigger: AACCGCTACAAGCTCCTGCAGAGTGCCACGGAGGCACAGAGACAAAAGATCCAACGCACTGCCCGCAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000482797.1
CDS CCA 72 bp AACTCCTCGGCACATTGGCAGCGACACTGGCTGTTCTaGCACAGGTACTCCCCCTCCCCATTGCACATGATA +
Preference number: 6 (lower is better)
Translates to: NSSAHWQRHWLF*HRYSPSPLHMI
Trigger: TATCATGTGCAATGGGGAGGGGGAGTACCTGTGCCAGAACAGCCAGTGTCGCTGCCAATGTGCCGAGGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CCA 72 bp GACTTGGCCATGTTGGCCAGCGTGTACTCCATGATCTaGATGTCCGTGATGGGGCAGTTGCACTGCGGAAAC +
Preference number: 6 (lower is better)
Translates to: DLAMLASVYSMI*MSVMGQLHCGN
Trigger: GTTTCCGCAGTGCAACTGCCCCATCACGGACATCCAGATCATGGAGTACACGCTGGCCAACATGGCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CCA 72 bp ATTGTCCTCTCTCTAGGCAGCTGGTGGTTGGGATTGTaGCGACAGCGTACACTGAGGCCGAAAAGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: IVLSLGSWWLGL*RQRTLRPKSLR
Trigger: CCGCAAGCTTTTCGGCCTCAGTGTACGCTGTCGCCACAATCCCAACCACCAGCTGCCTAGAGAGAGGACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CAA 72 bp GTGTACTCCATGATCTGGATGTCCGTGATGGGGCAGTaGCACTGCGGAAACTCCTCGGCACATTGGCAGCGA +
Preference number: 6 (lower is better)
Translates to: VYSMIWMSVMGQ*HCGNSSAHWQR
Trigger: TCGCTGCCAATGTGCCGAGGAGTTTCCGCAGTGCAACTGCCCCATCACGGACATCCAGATCATGGAGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 72 bp GGATTGTGGCGACAGCGTACACTGAGGCCGAAAAGCTaGCGGGCAGTGCGTTGGATCTTTTGTCTCTGTGCC +
Preference number: 6 (lower is better)
Translates to: GLWRQRTLRPKS*RAVRWIFCLCA
Trigger: GGCACAGAGACAAAAGATCCAACGCACTGCCCGCAAGCTTTTCGGCCTCAGTGTACGCTGTCGCCACAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000482797.1
CDS CAA 72 bp ACCATGTGGATGAAGTCCATGCGGTTCTTGTTGCTCTaGAGAGTGAGGGACATGCGCTTGCGCCACCGAGGG +
Preference number: 6 (lower is better)
Translates to: TMWMKSMRFLLL*RVRDMRLRHRG
Trigger: CCCTCGGTGGCGCAAGCGCATGTCCCTCACTCTCAAGAGCAACAAGAACCGCATGGACTTCATCCACATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CAA 90 bp GAGTGGTGGAAAGGCCCCCTGTCTGAAATGAGCCAATCAAATTCCTaGGAGACATGTTGGTCTGTCCCAGCTGGTTCCTGGTGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: EWWKGPLSEMSQSNS*ETCWSVPAGSWWEG
Trigger: GCCCTCCCACCAGGAACCAGCTGGGACAGACCAACATGTCTCCAAGGAATTTGATTGGCTCATTTCAGACAGGGGGCCTTTCCACCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 90 bp ATGGACATGCCGATCACCATGTGGATGAAGTCCATGCGGTTCTTGTaGCTCTTGAGAGTGAGGGACATGCGCTTGCGCCACCGAGGGTCA +
Preference number: 6 (lower is better)
Translates to: MDMPITMWMKSMRFL*LLRVRDMRLRHRGS
Trigger: TGACCCTCGGTGGCGCAAGCGCATGTCCCTCACTCTCAAGAGCAACAAGAACCGCATGGACTTCATCCACATGGTGATCGGCATGTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 72 bp TCCTGGAAGTCCAGGTCAGTCTCAAAGCTGATGAACTaGTCGCTCCGCTCCGAGTCCACGTTCTGTGGTTCA +
Preference number: 6 (lower is better)
Translates to: SWKSRSVSKLMN*SLRSESTFCGS
Trigger: TGAACCACAGAACGTGGACTCGGAGCGGAGCGAGCAGTTCATCAGCTTTGAGACTGACCTGGACTTCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 72 bp ATGATCTCGGTGAGGTCTCTTTACTGCTTGGGCCTCTaGCTGTGCGTCTCTCTCTCTAGGCAGCTGGTGGTT +
Preference number: 6 (lower is better)
Translates to: MISVRSLYCLGL*LCVSLSRQLVV
Trigger: AACCACCAGCTGCCTAGAGAGAGAGACGCACAGGCAGAGGCCCAAGCAGTAAAGAGACCTCACCGAGATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS CAA 72 bp CTCCATTCTGTGGAGTCCTGGAGTCAATGTCCGTCTTaGGCGGAGAGCTGCGGGAGGACGCTTTTTATTCGG +
Preference number: 6 (lower is better)
Translates to: LHSVESWSQCPS*AESCGRTLFIR
Trigger: CCGAATAAAAAGCGTCCTCCCGCAGCTCTCCGCCAAAGACGGACATTGACTCCAGGACTCCACAGAATGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 90 bp CCACCGATTGCCCAGCAAAAGAGTCCAGTTGTAGCACTGGCTGTTTaGGAGACGGATCTTCTCCCAGCGTGGGTAGCCAAATTCCCCGAA +
Preference number: 6 (lower is better)
Translates to: PPIAQQKSPVVALAV*ETDLLPAWVAKFPE
Trigger: TTCGGGGAATTTGGCTACCCACGCTGGGAGAAGATCCGTCTCCAAAACAGCCAGTGCTACAACTGGACTCTTTTGCTGGGCAATCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CAA 72 bp ATGCCGATCACCATGTGGATGAAGTCCATGCGGTTCTaGTTGCTCTTGAGAGTGAGGGACATGCGCTTGCGC +
Preference number: 6 (lower is better)
Translates to: MPITMWMKSMRF*LLLRVRDMRLR
Trigger: GCGCAAGCGCATGTCCCTCACTCTCAAGAGCAACAAGAACCGCATGGACTTCATCCACATGGTGATCGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CAA 72 bp GCCCAGCAAAAGAGTCCAGTTGTAGCACTGGCTGTTTaGGAGACGGATCTTCTCCCAGCGTGGGTAGCCAAA +
Preference number: 6 (lower is better)
Translates to: AQQKSPVVALAV*ETDLLPAWVAK
Trigger: TTTGGCTACCCACGCTGGGAGAAGATCCGTCTCCAAAACAGCCAGTGCTACAACTGGACTCTTTTGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CAA 72 bp AGGTCCAAGGCGTGGTTCACCCTGATGATCTCGCTGTaGGTCAGTTTCAGGCGGTGTTTCAGCATACAGGAG +
Preference number: 6 (lower is better)
Translates to: RSKAWFTLMISL*VSFRRCFSIQE
Trigger: CTCCTGTATGCTGAAACACCGCCTGAAACTGACCAACAGCGAGATCATCAGGGTGAACCACGCCTTGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CAA 72 bp GCTGTCATCTGGTCCGACTGTTTGAGGATCTCCGTGTaGTACAGGTCCAAGGCGTGGTTCACCCTGATGATC +
Preference number: 6 (lower is better)
Translates to: AVIWSDCLRISV*YRSKAWFTLMI
Trigger: GATCATCAGGGTGAACCACGCCTTGGACCTGTACAACACGGAGATCCTCAAACAGTCGGACCAGATGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CAA 90 bp CAGAGTTTGGCTGTCATCTGGTCCGACTGTTTGAGGATCTCCGTGTaGTACAGGTCCAAGGCGTGGTTCACCCTGATGATCTCGCTGTTG +
Preference number: 6 (lower is better)
Translates to: QSLAVIWSDCLRISV*YRSKAWFTLMISLL
Trigger: CAACAGCGAGATCATCAGGGTGAACCACGCCTTGGACCTGTACAACACGGAGATCCTCAAACAGTCGGACCAGATGACAGCCAAACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS CAA 90 bp CTGCAATTGATTCACTGCATGATCTCGGTGAGGTCTCTTTACTGCTaGGGCCTCTGCCTGTGCGTCTCTCTCTCTAGGCAGCTGGTGGTT +
Preference number: 6 (lower is better)
Translates to: LQLIHCMISVRSLYC*GLCLCVSLSRQLVV
Trigger: AACCACCAGCTGCCTAGAGAGAGAGACGCACAGGCAGAGGCCCAAGCAGTAAAGAGACCTCACCGAGATCATGCAGTGAATCAATTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS TCA 72 bp GTGCCGTACTTTTTGATGATGGTATCGATGAACTGCTaGGTGGTAGGTCTCCTGCCAAGCAGGCGGATGCTC +
Preference number: 6 (lower is better)
Translates to: VPYFLMMVSMNC*VVGLLPSRRML
Trigger: GAGCATCCGCCTGCTTGGCAGGAGACCTACCACTCAGCAGTTCATCGATACCATCATCAAAAAGTACGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS TCA 72 bp GTTAGCAGAGTTTGGCTGTCATCTGGTCCGACTGTTTaGGGATCTCCGTGTTGTACAGGTCCAAGGCGTGGT +
Preference number: 6 (lower is better)
Translates to: VSRVWLSSGPTV*GSPCCTGPRRG
Trigger: ACCACGCCTTGGACCTGTACAACACGGAGATCCTCAAACAGTCGGACCAGATGACAGCCAAACTCTGCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 72 bp TTGATTCACTGCATGATCTCGGTGAGGTCTCTTTACTaGTTGGGCCTCTGCCTGTGCGTCTCTCTCTCTAGG +
Preference number: 6 (lower is better)
Translates to: LIHCMISVRSLY*LGLCLCVSLSR
Trigger: CCTAGAGAGAGAGACGCACAGGCAGAGGCCCAAGCAGTAAAGAGACCTCACCGAGATCATGCAGTGAATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS CAA 90 bp GTGTTGTACAGGTCCAAGGCGTGGTTCACCCTGATGATCTCGCTGTaGGTCAGTTTCAGGCGGTGTTTCAGCATACAGGAGAACAAGTCC +
Preference number: 6 (lower is better)
Translates to: VLYRSKAWFTLMISL*VSFRRCFSIQENKS
Trigger: GGACTTGTTCTCCTGTATGCTGAAACACCGCCTGAAACTGACCAACAGCGAGATCATCAGGGTGAACCACGCCTTGGACCTGTACAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS TCA 72 bp AGCTCCTGGAGTGGTGGAAAGGCCCCCTGTCTGAAATaGGCCAATCAAATTCCTTGGAGACATGTTGGTCTG +
Preference number: 6 (lower is better)
Translates to: SSWSGGKAPCLK*ANQIPWRHVGL
Trigger: CAGACCAACATGTCTCCAAGGAATTTGATTGGCTCATTTCAGACAGGGGGCCTTTCCACCACTCCAGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS TCA 72 bp CCCAGTGCGTGTCTCTGTGACCTTGATTGCTCCAGTTaGTATCTGGATCTCATGAAGCCTCCTCATGGTACC +
Preference number: 6 (lower is better)
Translates to: PSACLCDLDCSS*YLDLMKPPHGT
Trigger: GGTACCATGAGGAGGCTTCATGAGATCCAGATATCAACTGGAGCAATCAAGGTCACAGAGACACGCACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CCA 72 bp ATGATGCGAGCTGGTGCAGAGCTTCAACACTTTGAGTaGCATTCCCTGACTTCCTGTCGAGGCGACTTTTGT +
Preference number: 6 (lower is better)
Translates to: MMRAGAELQHFE*HSLTSCRGDFC
Trigger: ACAAAAGTCGCCTCGACAGGAAGTCAGGGAATGCCACTCAAAGTGTTGAAGCTCTGCACCAGCTCGCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 72 bp AAAGGCCCCCTGTCTGAAATGAGCCAATCAAATTCCTaGGAGACATGTTGGTCTGTCCCAGCTGGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: KGPLSEMSQSNS*ETCWSVPAGSW
Trigger: CCAGGAACCAGCTGGGACAGACCAACATGTCTCCAAGGAATTTGATTGGCTCATTTCAGACAGGGGGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 72 bp CTGAAGACCTTGAAGGTGCAGTTTGCTCTCCGTGCTTaGCAGAAGGACGGAACTCACAGAGTCCAGATTGTC +
Preference number: 6 (lower is better)
Translates to: LKTLKVQFALRA*QKDGTHRVQIV
Trigger: GACAATCTGGACTCTGTGAGTTCCGTCCTTCTGCAAAGCACGGAGAGCAAACTGCACCTTCAAGGTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS TCA 72 bp CCTCCTCATGGTACCATCACGGTCAACAAAGTAGGATaGTGCGAGCTGGTGCAGAGCTTCAACACTTTGAGT +
Preference number: 6 (lower is better)
Translates to: PPHGTITVNKVG*CELVQSFNTLS
Trigger: ACTCAAAGTGTTGAAGCTCTGCACCAGCTCGCATCATCCTACTTTGTTGACCGTGATGGTACCATGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS TCA 72 bp GGTTCCCCAAAACCCATTCTCATTACAGTAGAGGAGTaGCTGGACCCTTGCAAGCCACTGCTGAATTGTCCT +
Preference number: 6 (lower is better)
Translates to: GSPKPILITVEE*LDPCKPLLNCP
Trigger: AGGACAATTCAGCAGTGGCTTGCAAGGGTCCAGTCACTCCTCTACTGTAATGAGAATGGGTTTTGGGGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS TCA 72 bp AATTCGGTCCCGAATATCCAACAAGAGGAGCATCACTaGCGAAGAGGAATAGAACTGGCCGCCCTGTGTGTA +
Preference number: 6 (lower is better)
Translates to: NSVPNIQQEEHH*RRGIELAALCV
Trigger: TACACACAGGGCGGCCAGTTCTATTCCTCTTCGTCAGTGATGCTCCTCTTGTTGGATATTCGGGACCGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265922.8
CDS GCA 72 bp GCCAGCTTGATGATCACAGAAGATGGCAATTCCCTTTaGACGGGGACGGAGGAAAAGAGGATTTGTCACACT +
Preference number: 6 (lower is better)
Translates to: ASLMITEDGNSL*TGTEEKRICHT
Trigger: AGTGTGACAAATCCTCTTTTCCTCCGTCCCCGTGCAAAGGGAATTGCCATCTTCTGTGATCATCAAGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS CCA 72 bp GTCCTAATTCCAGTTAGATTAGCTCCCTTTCAGACTTaGCTCAAGGCCACTCATGCAGTGGCACTGAGTGAG +
Preference number: 6 (lower is better)
Translates to: VLIPVRLAPFQT*LKATHAVALSE
Trigger: CTCACTCAGTGCCACTGCATGAGTGGCCTTGAGCCAAGTCTGAAAGGGAGCTAATCTAACTGGAATTAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373964.2
CDS CAA 72 bp TGCCAGCTTGATGATCACAGAAGATGGCAATTCCCTTaGCACGGGGACGGAGGAAAAGAGGATTTGTCACAC +
Preference number: 6 (lower is better)
Translates to: CQLDDHRRWQFP*HGDGGKEDLSH
Trigger: GTGTGACAAATCCTCTTTTCCTCCGTCCCCGTGCAAAGGGAATTGCCATCTTCTGTGATCATCAAGCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS GCA 72 bp GAGGAAAGATTATCTGAAGACCTTGAAGGTGCAGTTTaGTCTCCGTGCTTTGCAGAAGGACGGAACTCACAG +
Preference number: 6 (lower is better)
Translates to: EERLSEDLEGAV*SPCFAEGRNSQ
Trigger: CTGTGAGTTCCGTCCTTCTGCAAAGCACGGAGAGCAAACTGCACCTTCAAGGTCTTCAGATAATCTTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS TCA 72 bp GTGACCTTGATTGCTCCAGTTGATATCTGGATCTCATaGAGCCTCCTCATGGTACCATCACGGTCAACAAAG +
Preference number: 6 (lower is better)
Translates to: VTLIAPVDIWIS*SLLMVPSRSTK
Trigger: CTTTGTTGACCGTGATGGTACCATGAGGAGGCTTCATGAGATCCAGATATCAACTGGAGCAATCAAGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CCA 72 bp CTCCAGTTGATATCTGGATCTCATGAAGCCTCCTCATaGTACCATCACGGTCAACAAAGTAGGATGATGCGA +
Preference number: 6 (lower is better)
Translates to: LQLISGSHEASS*YHHGQQSRMMR
Trigger: TCGCATCATCCTACTTTGTTGACCGTGATGGTACCATGAGGAGGCTTCATGAGATCCAGATATCAACTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 90 bp CCCATTGCACATGATATAGCTCAAGGCCGACTGGACAAACTTCTCTaGCAGATACTGAGGAAAGATTATCTGAAGACCTTGAAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: PIAHDIAQGRLDKLL*QILRKDYLKTLKVQ
Trigger: CTGCACCTTCAAGGTCTTCAGATAATCTTTCCTCAGTATCTGCAAGAGAAGTTTGTCCAGTCGGCCTTGAGCTATATCATGTGCAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 90 bp TTTAGGTCAGTGTCATTAACAAACTTCCAGATTGATGTTGCCAGCTaGATGATCACAGAAGATGGCAATTCCCTTTGCACGGGGACGGAG +
Preference number: 6 (lower is better)
Translates to: FRSVSLTNFQIDVAS*MITEDGNSLCTGTE
Trigger: CTCCGTCCCCGTGCAAAGGGAATTGCCATCTTCTGTGATCATCAAGCTGGCAACATCAATCTGGAAGTTTGTTAATGACACTGACCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS CAA 90 bp TGGAATTGGAGTCAAAATGTTTTCAATCTTGCCTTGTCTCTGCAATaGATTCACTGCATGATCTCGGTGAGGTCTCTTTACTGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: WNWSQNVFNLALSLQ*IHCMISVRSLYCLG
Trigger: GCCCAAGCAGTAAAGAGACCTCACCGAGATCATGCAGTGAATCAATTGCAGAGACAAGGCAAGATTGAAAACATTTTGACTCCAATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS CAA 72 bp CATGATATAGCTCAAGGCCGACTGGACAAACTTCTCTaGCAGATACTGAGGAAAGATTATCTGAAGACCTTG +
Preference number: 6 (lower is better)
Translates to: HDIAQGRLDKLL*QILRKDYLKTL
Trigger: CAAGGTCTTCAGATAATCTTTCCTCAGTATCTGCAAGAGAAGTTTGTCCAGTCGGCCTTGAGCTATATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265922.8
ENST00000373964.2
CDS CAA 72 bp GTGTCATTAACAAACTTCCAGATTGATGTTGCCAGCTaGATGATCACAGAAGATGGCAATTCCCTTTGCACG +
Preference number: 6 (lower is better)
Translates to: VSLTNFQIDVAS*MITEDGNSLCT
Trigger: CGTGCAAAGGGAATTGCCATCTTCTGTGATCATCAAGCTGGCAACATCAATCTGGAAGTTTGTTAATGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS TCA 72 bp ATAAAGCTGTTATATGGCAGCAAATCCCAGCTGCTGTaGAGAGTTTCTTGCAATGTGACAGATTTAGGTCAG +
Preference number: 6 (lower is better)
Translates to: IKLLYGSKSQLL*RVSCNVTDLGQ
Trigger: CTGACCTAAATCTGTCACATTGCAAGAAACTCTTCACAGCAGCTGGGATTTGCTGCCATATAACAGCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS CCA 72 bp TTATTAGAGAGTTCCACATACCATAAAGCTGTTATATaGCAGCAAATCCCAGCTGCTGTGAAGAGTTTCTTG +
Preference number: 6 (lower is better)
Translates to: LLESSTYHKAVI*QQIPAAVKSFL
Trigger: CAAGAAACTCTTCACAGCAGCTGGGATTTGCTGCCATATAACAGCTTTATGGTATGTGGAACTCTCTAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS CAA 72 bp AGTCAAAATGTTTTCAATCTTGCCTTGTCTCTGCAATaGATTCACTGCATGATCTCGGTGAGGTCTCTTTAC +
Preference number: 6 (lower is better)
Translates to: SQNVFNLALSLQ*IHCMISVRSLY
Trigger: GTAAAGAGACCTCACCGAGATCATGCAGTGAATCAATTGCAGAGACAAGGCAAGATTGAAAACATTTTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS CAA 72 bp CATTGGAATTGGAGTCAAAATGTTTTCAATCTTGCCTaGTCTCTGCAATTGATTCACTGCATGATCTCGGTG +
Preference number: 6 (lower is better)
Translates to: HWNWSQNVFNLA*SLQLIHCMISV
Trigger: CACCGAGATCATGCAGTGAATCAATTGCAGAGACAAGGCAAGATTGAAAACATTTTGACTCCAATTCCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482797.1
CDS GCA 72 bp AGAGCATTGGAATTGGAGTCAAAATGTTTTCAATCTTaGCTTGTCTCTGCAATTGATTCACTGCATGATCTC +
Preference number: 6 (lower is better)
Translates to: RALELESKCFQS*LVSAIDSLHDL
Trigger: GAGATCATGCAGTGAATCAATTGCAGAGACAAGGCAAGATTGAAAACATTTTGACTCCAATTCCAATGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482797.1