Pregenerated sensors for BRI3 (Homo sapiens)
Ensembl gene IDs: ENSG00000164713Ensembl transcript IDs: ENST00000456357.6, ENST00000473967.1, ENST00000474291.1, ENST00000485422.4, ENST00000491463.4, ENST00000539286.5
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGAGAGCTCCTTTTCTTGGTAGTTAGGAGTCGCCAACGGATTCGCTaGACACGGCCCATCCAGGACACAGGCCTGGGCGTCGGAGTCACG | + |
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Preference number: 1 (lower is better) Translates to: RELLFLVVRSRQRIR*TRPIQDTGLGVGVT Trigger: CGTGACTCCGACGCCCAGGCCTGTGTCCTGGATGGGCCGTGTGCAGCGAATCCGTTGGCGACTCCTAACTACCAAGAAAAGGAGCTCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| 3UTR GCA 90 bp | TTCATTTCCTCCACACATGGGCGTTTCTGGAGCAGTGGACCTGTCTaGCCTGAGCTCTCACCAGGTTGTTCAGGGAGGTTGCCGTCCACA | + |
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Preference number: 1 (lower is better) Translates to: FISSTHGRFWSSGPV*PELSPGCSGRLPST Trigger: TGTGGACGGCAACCTCCCTGAACAACCTGGTGAGAGCTCAGGGCAGACAGGTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| 3UTR CCA 90 bp | CCTGGGCGTCGGAGTCACGGCTCCTTGTGTTCTCACTCAGCTAGTTaGCCAAAGCTGCATCCATTACCAGTACACTCAAACTGCTCGGGG | + |
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Preference number: 1 (lower is better) Translates to: PGRRSHGSLCSHSAS*PKLHPLPVHSNCSG Trigger: CCCCGAGCAGTTTGAGTGTACTGGTAATGGATGCAGCTTTGGCCAACTAGCTGAGTGAGAACACAAGGAGCCGTGACTCCGACGCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| 3UTR GCA 90 bp | GGAGTCACGGCTCCTTGTGTTCTCACTCAGCTAGTTGGCCAAAGCTaGATCCATTACCAGTACACTCAAACTGCTCGGGGTCCTGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: GVTAPCVLTQLVGQS*IHYQYTQTARGPGF Trigger: GAAACCAGGACCCCGAGCAGTTTGAGTGTACTGGTAATGGATGCAGCTTTGGCCAACTAGCTGAGTGAGAACACAAGGAGCCGTGACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| 3UTR CCA 90 bp | TCTATTAAAAGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTaGAGCAGTGGACCTGTCTGCCCTGAGCTCTCACCAGGTTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: SIKSLNFISSTHGRF*SSGPVCPELSPGCS Trigger: TGAACAACCTGGTGAGAGCTCAGGGCAGACAGGTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCTTTTAATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| 3UTR CAA 90 bp | ACGGCCCATCCAGGACACAGGCCTGGGCGTCGGAGTCACGGCTCCTaGTGTTCTCACTCAGCTAGTTGGCCAAAGCTGCATCCATTACCA | + |
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Preference number: 2 (lower is better) Translates to: TAHPGHRPGRRSHGS*CSHSASWPKLHPLP Trigger: TGGTAATGGATGCAGCTTTGGCCAACTAGCTGAGTGAGAACACAAGGAGCCGTGACTCCGACGCCCAGGCCTGTGTCCTGGATGGGCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| 3UTR-3UTR GCA 90 bp | AGTGCTAAGACGCTTTGCCTGCCCTTATCACAGCCACACGTAGCACTCGACGAACGCCAACGGATTCGCTaGACACGGCCCATCCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: SAKTLCLPLSQPHVALDERQRIR*TRPIQD Trigger: GTCCTGGATGGGCCGTGTGCAGCGAATCCGTTGGCG...TTCGTCGAGTGCTACGTGTGGCTGTGATAAGGGCAGGCAAAGCGTCTTAGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| 3UTR CAA 90 bp | GCCACACGTAGCACTCGACGAAATCTCCTCCGAGAGCTCCTTTTCTaGGTAGTTAGGAGTCGCCAACGGATTCGCTGCACACGGCCCATC | + |
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Preference number: 2 (lower is better) Translates to: ATRSTRRNLLRELLF*VVRSRQRIRCTRPI Trigger: GATGGGCCGTGTGCAGCGAATCCGTTGGCGACTCCTAACTACCAAGAAAAGGAGCTCTCGGAGGAGATTTCGTCGAGTGCTACGTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| 3UTR-3UTR GCA 90 bp | AGTGCTAAGACGCTTTGCCTGCCCTTATCACAGCCACACGTAGCACTCGACGAACTAGTTGGCCAAAGCTaGATCCATTACCAGTACACT | + |
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Preference number: 2 (lower is better) Translates to: SAKTLCLPLSQPHVALDELVGQS*IHYQYT Trigger: AGTGTACTGGTAATGGATGCAGCTTTGGCCAACTAG...TTCGTCGAGTGCTACGTGTGGCTGTGATAAGGGCAGGCAAAGCGTCTTAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| 3UTR CCA 72 bp | GGATTCGCTGCACACGGCCCATCCAGGACACAGGCCTaGGCGTCGGAGTCACGGCTCCTTGTGTTCTCACTC | + |
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Preference number: 3 (lower is better) Translates to: GFAAHGPSRTQA*ASESRLLVFSL Trigger: GAGTGAGAACACAAGGAGCCGTGACTCCGACGCCCAGGCCTGTGTCCTGGATGGGCCGTGTGCAGCGAATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| 3UTR TCA 72 bp | ACATGGGCGTTTCTGGAGCAGTGGACCTGTCTGCCCTaGGCTCTCACCAGGTTGTTCAGGGAGGTTGCCGTC | + |
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Preference number: 3 (lower is better) Translates to: TWAFLEQWTCLP*ALTRLFREVAV Trigger: GACGGCAACCTCCCTGAACAACCTGGTGAGAGCTCAGGGCAGACAGGTCCACTGCTCCAGAAACGCCCATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| 3UTR GCA 72 bp | CTTTTCTTGGTAGTTAGGAGTCGCCAACGGATTCGCTaGACACGGCCCATCCAGGACACAGGCCTGGGCGTC | + |
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Preference number: 3 (lower is better) Translates to: LFLVVRSRQRIR*TRPIQDTGLGV Trigger: GACGCCCAGGCCTGTGTCCTGGATGGGCCGTGTGCAGCGAATCCGTTGGCGACTCCTAACTACCAAGAAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| 3UTR CCA 72 bp | AGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTaGAGCAGTGGACCTGTCTGCCCTGAGCTCTCACCA | + |
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Preference number: 3 (lower is better) Translates to: SLNFISSTHGRF*SSGPVCPELSP Trigger: TGGTGAGAGCTCAGGGCAGACAGGTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| 3UTR GCA 72 bp | GCTCCTTGTGTTCTCACTCAGCTAGTTGGCCAAAGCTaGATCCATTACCAGTACACTCAAACTGCTCGGGGT | + |
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Preference number: 3 (lower is better) Translates to: APCVLTQLVGQS*IHYQYTQTARG Trigger: ACCCCGAGCAGTTTGAGTGTACTGGTAATGGATGCAGCTTTGGCCAACTAGCTGAGTGAGAACACAAGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| 3UTR CCA 72 bp | CGGAGTCACGGCTCCTTGTGTTCTCACTCAGCTAGTTaGCCAAAGCTGCATCCATTACCAGTACACTCAAAC | + |
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Preference number: 3 (lower is better) Translates to: RSHGSLCSHSAS*PKLHPLPVHSN Trigger: GTTTGAGTGTACTGGTAATGGATGCAGCTTTGGCCAACTAGCTGAGTGAGAACACAAGGAGCCGTGACTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR CCA 90 bp | GCCAACGGATTCGCTGCACACGGCCCATCCAGGACACAGGCCTGGGCGTCGGAGTGCAGCAGCGGCTTGTaGTCCATGGCGGCCCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: ANGFAAHGPSRTQAWASECSSGL*SMAARP Trigger: CGGCCGGGCCGCCATGGACCACAAGCCGCTGCTGCA...CTCCGACGCCCAGGCCTGTGTCCTGGATGGGCCGTGTGCAGCGAATCCGTTGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR GCA 90 bp | TCGCTGCACACGGCCCATCCAGGACACAGGCCTGGGCGTCGGAGTCACGGCTCCCCAGTACACTCAAACTaGTCGGGGTCCTGGTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SLHTAHPGHRPGRRSHGSPVHSN*SGSWFL Trigger: GAGAAACCAGGACCCCGAGCAGTTTGAGTGTACTGG...GGAGCCGTGACTCCGACGCCCAGGCCTGTGTCCTGGATGGGCCGTGTGCAGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR GCA 90 bp | TCCAGGACACAGGCCTGGGCGTCGGAGTCACGGCTCCTTGTGTTCTCACTCAGCCGCCAACGGATTCGCTaGACACGGCCCATCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: SRTQAWASESRLLVFSLSRQRIR*TRPIQD Trigger: GTCCTGGATGGGCCGTGTGCAGCGAATCCGTTGGCG...GCTGAGTGAGAACACAAGGAGCCGTGACTCCGACGCCCAGGCCTGTGTCCTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR GCA 90 bp | CGCTGCACACGGCCCATCCAGGACACAGGCCTGGGCGTCGGAGTCACGGCTCCTAGTGCTAAGACGCTTTaGCTGCCCTTATCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: RCTRPIQDTGLGVGVTAPSAKTL*LPLSQP Trigger: TGGCTGTGATAAGGGCAGGCAAAGCGTCTTAGCACT...AGGAGCCGTGACTCCGACGCCCAGGCCTGTGTCCTGGATGGGCCGTGTGCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| 3UTR CAA 72 bp | CCAGGACACAGGCCTGGGCGTCGGAGTCACGGCTCCTaGTGTTCTCACTCAGCTAGTTGGCCAAAGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: PGHRPGRRSHGS*CSHSASWPKLH Trigger: ATGCAGCTTTGGCCAACTAGCTGAGTGAGAACACAAGGAGCCGTGACTCCGACGCCCAGGCCTGTGTCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR GCA 90 bp | GCCAACGGATTCGCTGCACACGGCCCATCCAGGACACAGGCCTGGGCGTCGGAGCTAGTTGGCCAAAGCTaGATCCATTACCAGTACACT | + |
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Preference number: 4 (lower is better) Translates to: ANGFAAHGPSRTQAWASELVGQS*IHYQYT Trigger: AGTGTACTGGTAATGGATGCAGCTTTGGCCAACTAG...CTCCGACGCCCAGGCCTGTGTCCTGGATGGGCCGTGTGCAGCGAATCCGTTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR GCA 90 bp | TCCAGGACACAGGCCTGGGCGTCGGAGTCACGGCTCCTTGTGTTCTCACTCAGCCTAAGACGCTTTGCCTaGCCTTATCACAGCCACACG | + |
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Preference number: 4 (lower is better) Translates to: SRTQAWASESRLLVFSLSLRRFA*PYHSHT Trigger: CGTGTGGCTGTGATAAGGGCAGGCAAAGCGTCTTAG...GCTGAGTGAGAACACAAGGAGCCGTGACTCCGACGCCCAGGCCTGTGTCCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR GCA 90 bp | CGCCAGAGCTGTAGAGTGCTAAGACGCTTTGCCTGCCCTTATCACAGCCACACGATGACCTCTGGTGCCTaGAGACAGGACAGCCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: RQSCRVLRRFACPYHSHTMTSGA*RQDSLL Trigger: TAGGAGGCTGTCCTGTCTGCAGGCACCAGAGGTCAT...CGTGTGGCTGTGATAAGGGCAGGCAAAGCGTCTTAGCACTCTACAGCTCTGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR TCA 90 bp | GGAGTCACGGCTCCTTGTGTTCTCACTCAGCTAGTTGGCCAAAGCTGCATCCATCGTGTAAAGCCAGGATaGCCTCTGGTGCCTGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: GVTAPCVLTQLVGQSCIHRVKPG*PLVPAD Trigger: GTCTGCAGGCACCAGAGGTCATCCTGGCTTTACACG...ATGGATGCAGCTTTGGCCAACTAGCTGAGTGAGAACACAAGGAGCCGTGACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR GCA 90 bp | AGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTGGAGCAGTGGACCTGTCCTGGGAGGCGCAGGTTaGAGTGAGCCGAGATCTCGC | + |
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Preference number: 4 (lower is better) Translates to: SLNFISSTHGRFWSSGPVLGGAG*SEPRSR Trigger: GCGAGATCTCGGCTCACTGCAACCTGCGCCTCCCAG...GACAGGTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| CDS-3UTR GCA 90 bp | AATCTCCTCCGAGAGCTCCTTTTCTTGGTAGTTAGGAGTCGCCAACGGATTCGCCAGGATGACCTCTGGTaGCTGCAGACAGGACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: NLLRELLFLVVRSRQRIRQDDLW*LQTGQP Trigger: AGGCTGTCCTGTCTGCAGGCACCAGAGGTCATCCTG...GCGAATCCGTTGGCGACTCCTAACTACCAAGAAAAGGAGCTCTCGGAGGAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR CCA 90 bp | TTGTGTTCTCACTCAGCTAGTTGGCCAAAGCTGCATCCATTACCAGTACACTCATCCAGGACACAGGCCTaGGCGTCGGAGTCACGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LCSHSASWPKLHPLPVHSSRTQA*ASESRL Trigger: GAGCCGTGACTCCGACGCCCAGGCCTGTGTCCTGGA...TGAGTGTACTGGTAATGGATGCAGCTTTGGCCAACTAGCTGAGTGAGAACACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR TCA 90 bp | CCTGGGCGTCGGAGTCACGGCTCCTTGTGTTCTCACTCAGCTAGTTGGCCAAAGTGGTTTCTCCGTGTTTaGATCAGGTACAGACTCTCA | + |
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Preference number: 4 (lower is better) Translates to: PGRRSHGSLCSHSASWPKWFLRV*IRYRLS Trigger: TGAGAGTCTGTACCTGATTCAAACACGGAGAAACCA...CTTTGGCCAACTAGCTGAGTGAGAACACAAGGAGCCGTGACTCCGACGCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR GCA 90 bp | AGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTGGAGCAGTGGACCTGTCCCGAGATCTCGCCATTaGACTCCAGCCTTGGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: SLNFISSTHGRFWSSGPVPRSRH*TPALGD Trigger: GTCACCCAAGGCTGGAGTGCAATGGCGAGATCTCGG...GACAGGTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| 3UTR CAA 72 bp | AGCACTCGACGAAATCTCCTCCGAGAGCTCCTTTTCTaGGTAGTTAGGAGTCGCCAACGGATTCGCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: STRRNLLRELLF*VVRSRQRIRCT Trigger: TGTGCAGCGAATCCGTTGGCGACTCCTAACTACCAAGAAAAGGAGCTCTCGGAGGAGATTTCGTCGAGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR TCA 90 bp | AAAGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTGGAGCAGTGGACCTGTGGACCTGTCTGCCCTaGGCTCTCACCAGGTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: KALISFPPHMGVSGAVDLWTCLP*ALTRLF Trigger: GAACAACCTGGTGAGAGCTCAGGGCAGACAGGTCCA...CAGGTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| CDS-3UTR CCA 90 bp | AGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTGGAGCAGTGGACCTGTCCATTTCCTCCACACATaGGCGTTTCTGGAGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SLNFISSTHGRFWSSGPVHFLHT*AFLEQW Trigger: CCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATG...GACAGGTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| CDS-3UTR CCA 90 bp | ATTAAAAGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTGGAGCAGTGGAGCCGGTAGGAGGGGTTaGTTCCCGTCGTCGTACACG | + |
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Preference number: 4 (lower is better) Translates to: IKSLNFISSTHGRFWSSGAGRRG*FPSSYT Trigger: CGTGTACGACGACGGGAACCAACCCCTCCTACCGGC...TCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCTTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| CDS-3UTR GCA 90 bp | TTAAAAGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTGGAGCAGTGGACAGCAGTGGACCTGTCTaGCCTGAGCTCTCACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LKALISFPPHMGVSGAVDSSGPV*PELSPG Trigger: ACCTGGTGAGAGCTCAGGGCAGACAGGTCCACTGCT...GTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCTTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| CDS-3UTR GCA 90 bp | AAAGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTGGAGCAGTGGACCTGCGTACACGAAGTTGCTaGAGACAGGACAGCCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: KALISFPPHMGVSGAVDLRTRSC*RQDSLL Trigger: TAGGAGGCTGTCCTGTCTGCAGCAACTTCGTGTACG...CAGGTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| CDS-3UTR GCA 90 bp | TTAAAAGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTGGAGCAGTGGACCGTCGTACACGAAGTTaGTGCAGACAGGACAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LKALISFPPHMGVSGAVDRRTRS*CRQDSL Trigger: GAGGCTGTCCTGTCTGCAGCAACTTCGTGTACGACG...GTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCTTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| CDS-3UTR CCA 90 bp | TTAAAAGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTGGAGCAGTGGACACACATGGGCGTTTCTaGAGCAGTGGACCTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LKALISFPPHMGVSGAVDTHGRF*SSGPVC Trigger: GCAGACAGGTCCACTGCTCCAGAAACGCCCATGTGT...GTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCTTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| CDS-3UTR CCA 90 bp | CTGCATCCATTACCAGTACACTCAAACTGCTCGGGGTCCTGGTTTCTCCGTGTTTCTCACTCAGCTAGTTaGCCAAAGCTGCATCCATTA | + |
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Preference number: 4 (lower is better) Translates to: LHPLPVHSNCSGSWFLRVSHSAS*PKLHPL Trigger: TAATGGATGCAGCTTTGGCCAACTAGCTGAGTGAGA...AACACGGAGAAACCAGGACCCCGAGCAGTTTGAGTGTACTGGTAATGGATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR GCA 90 bp | TTAAAAGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTGGAGCAGTGGACGTTGTTCAGGGAGGTTaGCGTCCACATGTCTACTGC | + |
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Preference number: 4 (lower is better) Translates to: LKALISFPPHMGVSGAVDVVQGG*RPHVYC Trigger: GCAGTAGACATGTGGACGGCAACCTCCCTGAACAAC...GTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| CDS GCA 90 bp | CTTCTCCTCGCCTGCAGGCGGTGTCCACACCGCCCTCTCCGCTCCTaGAGACCGGGTCCTGGAGGGCGGCCGGGCGGTCCACGGGCCGGT | + |
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Preference number: 5 (lower is better) Translates to: LLLACRRCPHRPLRS*RPGPGGRPGGPRAG Trigger: ACCGGCCCGTGGACCGCCCGGCCGCCCTCCAGGACCCGGTCTGCAGGAGCGGAGAGGGCGGTGTGGACACCGCCTGCAGGCGAGGAGAAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456357.6 |
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| CDS GCA 90 bp | CCGTCCTTCTGCACAGTCTTTAGCACCCAGGACCCTCGAGACCTGTaGCATGGCCCCAACCCATCCACGTGGGGTGTCTCACAGGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: PSFCTVFSTQDPRDL*HGPNPSTWGVSQAP Trigger: GGGGGCCTGTGAGACACCCCACGTGGATGGGTTGGGGCCATGGCACAGGTCTCGAGGGTCCTGGGTGCTAAAGACTGTGCAGAAGGACGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 90 bp | GGCCTGGAAAAGAGCCCGCAGCCGCAGGGATCCTCTTCTGCACGGTaGATGCCTTCAGGCTGCACGCTGCCTCTGTTTCTCAACAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: GLEKSPQPQGSSSAR*MPSGCTLPLFLNSP Trigger: GGGACTGTTGAGAAACAGAGGCAGCGTGCAGCCTGAAGGCATGCACCGTGCAGAAGAGGATCCCTGCGGCTGCGGGCTCTTTTCCAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 90 bp | AAGCAGTGCAGATCAACCCGGCACACACCGCCTTGTCCTTGGGCCTaGAAAAGAGCCCGCAGCCGCAGGGATCCTCTTCTGCACGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: KQCRSTRHTPPCPWA*KRARSRRDPLLHGA Trigger: TGCACCGTGCAGAAGAGGATCCCTGCGGCTGCGGGCTCTTTTCCAGGCCCAAGGACAAGGCGGTGTGTGCCGGGTTGATCTGCACTGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 90 bp | CCGCAGCCGCAGGGATCCTCTTCTGCACGGTGCATGCCTTCAGGCTaGACGCTGCCTCTGTTTCTCAACAGTCCCTGTTCCTTCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: PQPQGSSSARCMPSG*TLPLFLNSPCSFWA Trigger: TGCCCAGAAGGAACAGGGACTGTTGAGAAACAGAGGCAGCGTGCAGCCTGAAGGCATGCACCGTGCAGAAGAGGATCCCTGCGGCTGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 90 bp | GTCCTTGGGCCTGGAAAAGAGCCCGCAGCCGCAGGGATCCTCTTCTaGACGGTGCATGCCTTCAGGCTGCACGCTGCCTCTGTTTCTCAA | + |
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Preference number: 5 (lower is better) Translates to: VLGPGKEPAAAGILF*TVHAFRLHAASVSQ Trigger: TTGAGAAACAGAGGCAGCGTGCAGCCTGAAGGCATGCACCGTGCAGAAGAGGATCCCTGCGGCTGCGGGCTCTTTTCCAGGCCCAAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 90 bp | GCCTCGTGCTCATGGGTAGAGAGTATGGGACAAACCTGCCCTAGCTaGTTCCTGGCCCAGCCACTTGCCAGCTGTGGGGTCTGTCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: ASCSWVESMGQTCPS*FLAQPLASCGVCPV Trigger: CACAGGACAGACCCCACAGCTGGCAAGTGGCTGGGCCAGGAACCAGCTAGGGCAGGTTTGTCCCATACTCTCTACCCATGAGCACGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 90 bp | TCTGCAGATGTTGCCGGCTGCTTCACTGGTCAGACCCCGTCCTTCTaGACAGTCTTTAGCACCCAGGACCCTCGAGACCTGTGCCATGGC | + |
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Preference number: 5 (lower is better) Translates to: SADVAGCFTGQTPSF*TVFSTQDPRDLCHG Trigger: GCCATGGCACAGGTCTCGAGGGTCCTGGGTGCTAAAGACTGTGCAGAAGGACGGGGTCTGACCAGTGAAGCAGCCGGCAACATCTGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 90 bp | CACACCGCATTCGGGCAGCCTGTCTGTCCCTCCCATAAAGGGCTCTaGTCAAGATCCAAGTCAAGCCGGACCCACTCCCACAAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HTAFGQPVCPSHKGL*SRSKSSRTHSHKQS Trigger: GCTCTGCTTGTGGGAGTGGGTCCGGCTTGACTTGGATCTTGACCAGAGCCCTTTATGGGAGGGACAGACAGGCTGCCCGAATGCGGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474291.1 |
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| CDS GCA 90 bp | TGGAAAAGAGCCCGCAGCCGCAGGGATCCTCTTCTGCACGGTGCATaGCTTCAGGCTGCACGCTGCCTCTGTTTCTCAACAGTCCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: WKRARSRRDPLLHGA*LQAARCLCFSTVPV Trigger: AACAGGGACTGTTGAGAAACAGAGGCAGCGTGCAGCCTGAAGGCATGCACCGTGCAGAAGAGGATCCCTGCGGCTGCGGGCTCTTTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS TCA 90 bp | TTCCTCCACACATGGGCGTTTCTGGAGCAGTGGACCTGTCTGCCCTaGGCTCTCACCAGGTTGTTCAGGGAGGTTGCCGTCCACATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLHTWAFLEQWTCLP*ALTRLFREVAVHMS Trigger: AGACATGTGGACGGCAACCTCCCTGAACAACCTGGTGAGAGCTCAGGGCAGACAGGTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485422.4 ENST00000491463.4 |
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| CDS CCA 90 bp | TGTCATCACGCTGCTCATCCCCGAGGAGAAGGATGGCTGGCTCTATaGAGAACACGACGTGTCCAAGGCGTAAGTCTGGGCGTGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CHHAAHPRGEGWLAL*RTRRVQGVSLGVMV Trigger: GACCATCACGCCCAGACTTACGCCTTGGACACGTCGTGTTCTCCATAGAGCCAGCCATCCTTCTCCTCGGGGATGAGCAGCGTGATGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS TCA 90 bp | CTCCTGGGAGCCTGGCGGGATGGCAGCTGTGAGACATTGAGATCGTaGCTGGCACCTGGTGAGGACTCTGTAAATGGAACTCATCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLGAWRDGSCETLRS*LAPGEDSVNGTHPH Trigger: GTGAGGATGAGTTCCATTTACAGAGTCCTCACCAGGTGCCAGTCACGATCTCAATGTCTCACAGCTGCCATCCCGCCAGGCTCCCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 90 bp | CATCTTCCCGCACACTGCGGGCTCCAACAAGACCTTACTCAGCTTTaGACAGGGAGATGTCATCACGCTGCTCATCCCCGAGGAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HLPAHCGLQQDLTQL*TGRCHHAAHPRGEG Trigger: TCCTTCTCCTCGGGGATGAGCAGCGTGATGACATCTCCCTGTGCAAAGCTGAGTAAGGTCTTGTTGGAGCCCGCAGTGTGCGGGAAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 90 bp | TGCACAGGGAGATGTCATCACGCTGCTCATCCCCGAGGAGAAGGATaGCTGGCTCTATGGAGAACACGACGTGTCCAAGGCGTAAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CTGRCHHAAHPRGEG*LALWRTRRVQGVSL Trigger: CAGACTTACGCCTTGGACACGTCGTGTTCTCCATAGAGCCAGCCATCCTTCTCCTCGGGGATGAGCAGCGTGATGACATCTCCCTGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 90 bp | CCAACAAGACCTTACTCAGCTTTGCACAGGGAGATGTCATCACGCTaGTCATCCCCGAGGAGAAGGATGGCTGGCTCTATGGAGAACACG | + |
|
Preference number: 5 (lower is better) Translates to: PTRPYSALHREMSSR*SSPRRRMAGSMENT Trigger: CGTGTTCTCCATAGAGCCAGCCATCCTTCTCCTCGGGGATGAGCAGCGTGATGACATCTCCCTGTGCAAAGCTGAGTAAGGTCTTGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 90 bp | AGCCTGTGTTTGAATGGAGACATGAACAGCACAGCCTCGTGCTCATaGGTAGAGAGTATGGGACAAACCTGCCCTAGCTGGTTCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLCLNGDMNSTASCS*VESMGQTCPSWFLA Trigger: GGCCAGGAACCAGCTAGGGCAGGTTTGTCCCATACTCTCTACCCATGAGCACGAGGCTGTGCTGTTCATGTCTCCATTCAAACACAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS-3UTR CAA 90 bp | GGAGTCACGGCTCCTTGTGTTCTCACTCAGCTAGTTGGCCAAAGCTGCATCCATCGGAGTCACGGCTCCTaGTGTTCTCACTCAGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GVTAPCVLTQLVGQSCIHRSHGS*CSHSAS Trigger: ACTAGCTGAGTGAGAACACAAGGAGCCGTGACTCCG...ATGGATGCAGCTTTGGCCAACTAGCTGAGTGAGAACACAAGGAGCCGTGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS CCA 90 bp | TTTCCATCCTGGTCCAGCTCGTGGAAGAGCGTTTCAAGCCAACTTTaGATAAAGCAGCTCTTACGGCCGTCGCTTCTCCCACTGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FPSWSSSWKSVSSQL*IKQLLRPSLLPLRS Trigger: AGACCTCAGTGGGAGAAGCGACGGCCGTAAGAGCTGCTTTATCCAAAGTTGGCTTGAAACGCTCTTCCACGAGCTGGACCAGGATGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473967.1 |
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| CDS CCA 90 bp | GTCCTCCAGCACCCCAACCCTCAAAGAAACACGGGGTTTCCATCCTaGTCCAGCTCGTGGAAGAGCGTTTCAAGCCAACTTTGGATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLQHPNPQRNTGFPS*SSSWKSVSSQLWIK Trigger: CTTTATCCAAAGTTGGCTTGAAACGCTCTTCCACGAGCTGGACCAGGATGGAAACCCCGTGTTTCTTTGAGGGTTGGGGTGCTGGAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473967.1 |
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| CDS TCA 90 bp | GCACGCTGCCTCTGTTTCTCAACAGTCCCTGTTCCTTCTGGGCAATaGTCAAAGCGAGGAAATAGGACAGGGTCAGTTTCCGTGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ARCLCFSTVPVPSGQ*SKRGNRTGSVSVEG Trigger: TCCTTCCACGGAAACTGACCCTGTCCTATTTCCTCGCTTTGATCATTGCCCAGAAGGAACAGGGACTGTTGAGAAACAGAGGCAGCGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS-3UTR CAA 90 bp | TTAAAAGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTGGAGCAGTGGACGAGGCTGAGGCAGGATaGAACCTGGGAGGCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LKALISFPPHMGVSGAVDEAEAG*NLGGAG Trigger: ACCTGCGCCTCCCAGGTTCAATCCTGCCTCAGCCTC...GTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCTTTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| CDS CCA 90 bp | CTGGGCAATGATCAAAGCGAGGAAATAGGACAGGGTCAGTTTCCGTaGAAGGAGCATTGTTGGCAAGATGAGAACAGGTGGATTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGNDQSEEIGQGQFP*KEHCWQDENRWIPG Trigger: CCCAGGAATCCACCTGTTCTCATCTTGCCAACAATGCTCCTTCCACGGAAACTGACCCTGTCCTATTTCCTCGCTTTGATCATTGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 90 bp | TGGTGTGAAGGTTGCGGCAGTCAAGCTGTTTGTGAGAGAGAGCCCTaGACCACAGCGTGTGAAGCTATTGGGCAAAAGAACAGAGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WCEGCGSQAVCEREP*TTACEAIGQKNRVF Trigger: GAAAACTCTGTTCTTTTGCCCAATAGCTTCACACGCTGTGGTCCAGGGCTCTCTCTCACAAACAGCTTGACTGCCGCAACCTTCACACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS-3UTR CAA 90 bp | AAAGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTGGAGCAGTGGACCTGGTCTTTTCTCCCTCTTaGCCGGTAGGAGGGGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KALISFPPHMGVSGAVDLVFSPS*PVGGVG Trigger: ACCAACCCCTCCTACCGGCAAAGAGGGAGAAAAGAC...CAGGTCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| CDS-3UTR CAA 90 bp | TGGCCAAAGCTGCATCCATTACCAGTACACTCAAACTGCTCGGGGTCCTGGTTTCGAGAGCTCCTTTTCTaGGTAGTTAGGAGTCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: WPKLHPLPVHSNCSGSWFRELLF*VVRSRQ Trigger: TTGGCGACTCCTAACTACCAAGAAAAGGAGCTCTCG...AAACCAGGACCCCGAGCAGTTTGAGTGTACTGGTAATGGATGCAGCTTTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS GCA 90 bp | GAACATGATGAAGAAGCAGAAAGTGAAGACCATCTTCCCGCACACTaGGGGCTCCAACAAGACCTTACTCAGCTTTGCACAGGGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: EHDEEAESEDHLPAH*GLQQDLTQLCTGRC Trigger: ACATCTCCCTGTGCAAAGCTGAGTAAGGTCTTGTTGGAGCCCGCAGTGTGCGGGAAGATGGTCTTCACTTTCTGCTTCTTCATCATGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 90 bp | AATATCAGCCTGTGTTTGAATGGAGACATGAACAGCACAGCCTCGTaGTCATGGGTAGAGAGTATGGGACAAACCTGCCCTAGCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NISLCLNGDMNSTAS*SWVESMGQTCPSWF Trigger: GAACCAGCTAGGGCAGGTTTGTCCCATACTCTCTACCCATGAGCACGAGGCTGTGCTGTTCATGTCTCCATTCAAACACAGGCTGATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS TCA 90 bp | AATAGGACAGGGTCAGTTTCCGTGGAAGGAGCATTGTTGGCAAGATaGGAACAGGTGGATTCCTGGGGTTTGCTCATTGGAATGTGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: NRTGSVSVEGALLAR*EQVDSWGLLIGMCL Trigger: TAGGCACATTCCAATGAGCAAACCCCAGGAATCCACCTGTTCTCATCTTGCCAACAATGCTCCTTCCACGGAAACTGACCCTGTCCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS TCA 90 bp | TTACCAGTACACTCAAACTGCTCGGGGTCCTGGTTTCTCCGTGTTTaGATCAGGTACAGACTCTCAAAGGATACGTGTAAAGCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LPVHSNCSGSWFLRV*IRYRLSKDTCKARM Trigger: CATCCTGGCTTTACACGTATCCTTTGAGAGTCTGTACCTGATTCAAACACGGAGAAACCAGGACCCCGAGCAGTTTGAGTGTACTGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS-3UTR CAA 90 bp | ATTAAAAGCCTTAATTTCATTTCCTCCACACATGGGCGTTTCTGGAGCAGTGGAGGTTGTTCAGGGAGGTaGCCGTCCACATGTCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: IKSLNFISSTHGRFWSSGGCSGR*PSTCLL Trigger: CAGTAGACATGTGGACGGCAACCTCCCTGAACAACC...TCCACTGCTCCAGAAACGCCCATGTGTGGAGGAAATGAAATTAAGGCTTTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| CDS TCA 90 bp | TCCTGGGGTTTGCTCATTGGAATGTGCCTATTGATTCTCATGCTTTaGAAAGCCATTACTGCTACACTCCCTCCAACAGGTACTTCCGAA | + |
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Preference number: 5 (lower is better) Translates to: SWGLLIGMCLLILML*KAITATLPPTGTSE Trigger: TTCGGAAGTACCTGTTGGAGGGAGTGTAGCAGTAATGGCTTTTCAAAGCATGAGAATCAATAGGCACATTCCAATGAGCAAACCCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 90 bp | AAGAAAGAAAACTGCTGGTGGGTTCAACACCAGCGAAGTAGAGAGTaGCAGGTTAAGGGGGCGCAGGTTTATGTTGTAATCATGAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: KKENCWWVQHQRSRE*QVKGAQVYVVIMKN Trigger: ATTCTTCATGATTACAACATAAACCTGCGCCCCCTTAACCTGCCACTCTCTACTTCGCTGGTGTTGAACCCACCAGCAGTTTTCTTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 72 bp | TCCACACCGCCCTCTCCGCTCCTGCAGACCGGGTCCTaGAGGGCGGCCGGGCGGTCCACGGGCCGGTGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: STPPSPLLQTGS*RAAGRSTGRCR Trigger: GCGACACCGGCCCGTGGACCGCCCGGCCGCCCTCCAGGACCCGGTCTGCAGGAGCGGAGAGGGCGGTGTGGA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456357.6 |
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| CDS GCA 72 bp | CCTGGAAAAGAGCCCGCAGCCGCAGGGATCCTCTTCTaGACGGTGCATGCCTTCAGGCTGCACGCTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGKEPAAAGILF*TVHAFRLHAAS Trigger: AGAGGCAGCGTGCAGCCTGAAGGCATGCACCGTGCAGAAGAGGATCCCTGCGGCTGCGGGCTCTTTTCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 72 bp | GCCCGCAGCCGCAGGGATCCTCTTCTGCACGGTGCATaGCTTCAGGCTGCACGCTGCCTCTGTTTCTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: ARSRRDPLLHGA*LQAARCLCFST Trigger: TGTTGAGAAACAGAGGCAGCGTGCAGCCTGAAGGCATGCACCGTGCAGAAGAGGATCCCTGCGGCTGCGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CAA 72 bp | GCTAAAGCAGTGCAGATCAACCCGGCACACACCGCCTaGTCCTTGGGCCTGGAAAAGAGCCCGCAGCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AKAVQINPAHTA*SLGLEKSPQPQ Trigger: CTGCGGCTGCGGGCTCTTTTCCAGGCCCAAGGACAAGGCGGTGTGTGCCGGGTTGATCTGCACTGCTTTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 72 bp | TGCACAGTCTTTAGCACCCAGGACCCTCGAGACCTGTaGCATGGCCCCAACCCATCCACGTGGGGTGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CTVFSTQDPRDL*HGPNPSTWGVS Trigger: TGAGACACCCCACGTGGATGGGTTGGGGCCATGGCACAGGTCTCGAGGGTCCTGGGTGCTAAAGACTGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 72 bp | GTTGCCGGCTGCTTCACTGGTCAGACCCCGTCCTTCTaGACAGTCTTTAGCACCCAGGACCCTCGAGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: VAGCFTGQTPSF*TVFSTQDPRDL Trigger: CAGGTCTCGAGGGTCCTGGGTGCTAAAGACTGTGCAGAAGGACGGGGTCTGACCAGTGAAGCAGCCGGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 72 bp | TTCGGGCAGCCTGTCTGTCCCTCCCATAAAGGGCTCTaGTCAAGATCCAAGTCAAGCCGGACCCACTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: FGQPVCPSHKGL*SRSKSSRTHSH Trigger: GTGGGAGTGGGTCCGGCTTGACTTGGATCTTGACCAGAGCCCTTTATGGGAGGGACAGACAGGCTGCCCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474291.1 |
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| CDS CCA 72 bp | GCTGCTCATCCCCGAGGAGAAGGATGGCTGGCTCTATaGAGAACACGACGTGTCCAAGGCGTAAGTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAHPRGEGWLAL*RTRRVQGVSLG Trigger: GCCCAGACTTACGCCTTGGACACGTCGTGTTCTCCATAGAGCCAGCCATCCTTCTCCTCGGGGATGAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 72 bp | CCAACCCATCCACGTGGGGTGTCTCACAGGCCCCCATaGTGTGAAGGTTGCGGCAGTCAAGCTGTTTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PTHPRGVSHRPP*CEGCGSQAVCE Trigger: CTCACAAACAGCTTGACTGCCGCAACCTTCACACCATGGGGGCCTGTGAGACACCCCACGTGGATGGGTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CAA 90 bp | CCATCTTCCCGCACACTGCGGGCTCCAACAAGACCTTACTCAGCTTaGCACAGGGAGATGTCATCACGCTGCTCATCCCCGAGGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSSRTLRAPTRPYSA*HREMSSRCSSPRRR Trigger: CCTTCTCCTCGGGGATGAGCAGCGTGATGACATCTCCCTGTGCAAAGCTGAGTAAGGTCTTGTTGGAGCCCGCAGTGTGCGGGAAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 72 bp | TGGCCCAGCCACTTGCCAGCTGTGGGGTCTGTCCTGTaGATAATAAATAGCAGCACCTTCCTCCTGGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WPSHLPAVGSVL*IINSSTFLLGA Trigger: GGCTCCCAGGAGGAAGGTGCTGCTATTTATTATCCACAGGACAGACCCCACAGCTGGCAAGTGGCTGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CAA 72 bp | CGCACACTGCGGGCTCCAACAAGACCTTACTCAGCTTaGCACAGGGAGATGTCATCACGCTGCTCATCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RTLRAPTRPYSA*HREMSSRCSSP Trigger: CGGGGATGAGCAGCGTGATGACATCTCCCTGTGCAAAGCTGAGTAAGGTCTTGTTGGAGCCCGCAGTGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 72 bp | GCACCAGACGGCCCCTCCCTTCCAGAGCAGCCAAGCTaGAAACTGTCTTCGTGGACATGCTCACATTTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: APDGPSLPEQPS*KLSSWTCSHFS Trigger: GCTAAAATGTGAGCATGTCCACGAAGACAGTTTGCAGCTTGGCTGCTCTGGAAGGGAGGGGCCGTCTGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 72 bp | GCACACTGCGGGCTCCAACAAGACCTTACTCAGCTTTaGACAGGGAGATGTCATCACGCTGCTCATCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: AHCGLQQDLTQL*TGRCHHAAHPR Trigger: TCGGGGATGAGCAGCGTGATGACATCTCCCTGTGCAAAGCTGAGTAAGGTCTTGTTGGAGCCCGCAGTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 72 bp | AGATGTCATCACGCTGCTCATCCCCGAGGAGAAGGATaGCTGGCTCTATGGAGAACACGACGTGTCCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RCHHAAHPRGEG*LALWRTRRVQG Trigger: GCCTTGGACACGTCGTGTTCTCCATAGAGCCAGCCATCCTTCTCCTCGGGGATGAGCAGCGTGATGACATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CAA 90 bp | ACTGTGGCCCTAGCCTGCCTTTGCGATTGGAATTGCGAGGGCAGTTaGGCGTTGGAGCGGTTTGTCTCTCTAAGAAGAGCCATCCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TVALACLCDWNCEGS*ALERFVSLRRAILA Trigger: AGCCAGGATGGCTCTTCTTAGAGAGACAAACCGCTCCAACGCCAAACTGCCCTCGCAATTCCAATCGCAAAGGCAGGCTAGGGCCACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CAA 90 bp | GTTGCCGTCCACATGTCTACTGCTGATAGGGTCTTTTCTCCCTCTTaGCCGGTAGGAGGGGTTGGTTCCCGTCGTCGTACACGAAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VAVHMSTADRVFSPS*PVGGVGSRRRTRSC Trigger: GCAACTTCGTGTACGACGACGGGAACCAACCCCTCCTACCGGCAAAGAGGGAGAAAAGACCCTATCAGCAGTAGACATGTGGACGGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491463.4 |
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| CDS TCA 72 bp | GCCTGGCGGGATGGCAGCTGTGAGACATTGAGATCGTaGCTGGCACCTGGTGAGGACTCTGTAAATGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: AWRDGSCETLRS*LAPGEDSVNGT Trigger: AGTTCCATTTACAGAGTCCTCACCAGGTGCCAGTCACGATCTCAATGTCTCACAGCTGCCATCCCGCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 72 bp | CCTTACTCAGCTTTGCACAGGGAGATGTCATCACGCTaGTCATCCCCGAGGAGAAGGATGGCTGGCTCTATG | + |
|
Preference number: 6 (lower is better) Translates to: PYSALHREMSSR*SSPRRRMAGSM Trigger: CATAGAGCCAGCCATCCTTCTCCTCGGGGATGAGCAGCGTGATGACATCTCCCTGTGCAAAGCTGAGTAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CAA 72 bp | CTGGTCCAGCTCGTGGAAGAGCGTTTCAAGCCAACTTaGGATAAAGCAGCTCTTACGGCCGTCGCTTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LVQLVEERFKPT*DKAALTAVASP Trigger: GGGAGAAGCGACGGCCGTAAGAGCTGCTTTATCCAAAGTTGGCTTGAAACGCTCTTCCACGAGCTGGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473967.1 |
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| CDS CAA 72 bp | TTGAACTGTGGCCCTAGCCTGCCTTTGCGATTGGAATaGCGAGGGCAGTTTGGCGTTGGAGCGGTTTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LNCGPSLPLRLE*RGQFGVGAVCL Trigger: GAGACAAACCGCTCCAACGCCAAACTGCCCTCGCAATTCCAATCGCAAAGGCAGGCTAGGGCCACAGTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CAA 72 bp | TTGGGTTTGAACTGTGGCCCTAGCCTGCCTTTGCGATaGGAATTGCGAGGGCAGTTTGGCGTTGGAGCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LGLNCGPSLPLR*ELRGQFGVGAV Trigger: AACCGCTCCAACGCCAAACTGCCCTCGCAATTCCAATCGCAAAGGCAGGCTAGGGCCACAGTTCAAACCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CAA 72 bp | TGGCAGTTGGGTTTGAACTGTGGCCCTAGCCTGCCTTaGCGATTGGAATTGCGAGGGCAGTTTGGCGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: WQLGLNCGPSLP*RLELRGQFGVG Trigger: TCCAACGCCAAACTGCCCTCGCAATTCCAATCGCAAAGGCAGGCTAGGGCCACAGTTCAAACCCAACTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CAA 90 bp | GTTTCCATCCTGGTCCAGCTCGTGGAAGAGCGTTTCAAGCCAACTTaGGATAAAGCAGCTCTTACGGCCGTCGCTTCTCCCACTGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: VSILVQLVEERFKPT*DKAALTAVASPTEV Trigger: GACCTCAGTGGGAGAAGCGACGGCCGTAAGAGCTGCTTTATCCAAAGTTGGCTTGAAACGCTCTTCCACGAGCTGGACCAGGATGGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473967.1 |
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| CDS CAA 90 bp | GCCCTAGCCTGCCTTTGCGATTGGAATTGCGAGGGCAGTTTGGCGTaGGAGCGGTTTGTCTCTCTAAGAAGAGCCATCCTGGCTAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: ALACLCDWNCEGSLA*ERFVSLRRAILAKA Trigger: TGCTTTAGCCAGGATGGCTCTTCTTAGAGAGACAAACCGCTCCAACGCCAAACTGCCCTCGCAATTCCAATCGCAAAGGCAGGCTAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CAA 90 bp | CATTGGCAGTTGGGTTTGAACTGTGGCCCTAGCCTGCCTTTGCGATaGGAATTGCGAGGGCAGTTTGGCGTTGGAGCGGTTTGTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: HWQLGLNCGPSLPLR*ELRGQFGVGAVCLS Trigger: AGAGAGACAAACCGCTCCAACGCCAAACTGCCCTCGCAATTCCAATCGCAAAGGCAGGCTAGGGCCACAGTTCAAACCCAACTGCCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CAA 90 bp | TGTGGACATTGGCAGTTGGGTTTGAACTGTGGCCCTAGCCTGCCTTaGCGATTGGAATTGCGAGGGCAGTTTGGCGTTGGAGCGGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: CGHWQLGLNCGPSLP*RLELRGQFGVGAVC Trigger: ACAAACCGCTCCAACGCCAAACTGCCCTCGCAATTCCAATCGCAAAGGCAGGCTAGGGCCACAGTTCAAACCCAACTGCCAATGTCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 72 bp | TGGTCCAGCTCGTGGAAGAGCGTTTCAAGCCAACTTTaGATAAAGCAGCTCTTACGGCCGTCGCTTCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: WSSSWKSVSSQL*IKQLLRPSLLP Trigger: TGGGAGAAGCGACGGCCGTAAGAGCTGCTTTATCCAAAGTTGGCTTGAAACGCTCTTCCACGAGCTGGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473967.1 |
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| CDS CCA 72 bp | CACCCCAACCCTCAAAGAAACACGGGGTTTCCATCCTaGTCCAGCTCGTGGAAGAGCGTTTCAAGCCAACTT | + |
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Preference number: 6 (lower is better) Translates to: HPNPQRNTGFPS*SSSWKSVSSQL Trigger: AAGTTGGCTTGAAACGCTCTTCCACGAGCTGGACCAGGATGGAAACCCCGTGTTTCTTTGAGGGTTGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473967.1 |
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| CDS CCA 72 bp | GGTTGCGGCAGTCAAGCTGTTTGTGAGAGAGAGCCCTaGACCACAGCGTGTGAAGCTATTGGGCAAAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: GCGSQAVCEREP*TTACEAIGQKN Trigger: GTTCTTTTGCCCAATAGCTTCACACGCTGTGGTCCAGGGCTCTCTCTCACAAACAGCTTGACTGCCGCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CAA 72 bp | CTAGCCTGCCTTTGCGATTGGAATTGCGAGGGCAGTTaGGCGTTGGAGCGGTTTGTCTCTCTAAGAAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: LACLCDWNCEGS*ALERFVSLRRA Trigger: GGCTCTTCTTAGAGAGACAAACCGCTCCAACGCCAAACTGCCCTCGCAATTCCAATCGCAAAGGCAGGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CAA 90 bp | CAGTTGGGTTTGAACTGTGGCCCTAGCCTGCCTTTGCGATTGGAATaGCGAGGGCAGTTTGGCGTTGGAGCGGTTTGTCTCTCTAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: QLGLNCGPSLPLRLE*RGQFGVGAVCLSKK Trigger: CTTCTTAGAGAGACAAACCGCTCCAACGCCAAACTGCCCTCGCAATTCCAATCGCAAAGGCAGGCTAGGGCCACAGTTCAAACCCAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 72 bp | TTGAATGGAGACATGAACAGCACAGCCTCGTGCTCATaGGTAGAGAGTATGGGACAAACCTGCCCTAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LNGDMNSTASCS*VESMGQTCPSW Trigger: CCAGCTAGGGCAGGTTTGTCCCATACTCTCTACCCATGAGCACGAGGCTGTGCTGTTCATGTCTCCATTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CAA 72 bp | TGCCTTTGCGATTGGAATTGCGAGGGCAGTTTGGCGTaGGAGCGGTTTGTCTCTCTAAGAAGAGCCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: CLCDWNCEGSLA*ERFVSLRRAIL Trigger: CAGGATGGCTCTTCTTAGAGAGACAAACCGCTCCAACGCCAAACTGCCCTCGCAATTCCAATCGCAAAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS TCA 72 bp | GGGTCAGTTTCCGTGGAAGGAGCATTGTTGGCAAGATaGGAACAGGTGGATTCCTGGGGTTTGCTCATTGGA | + |
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Preference number: 6 (lower is better) Translates to: GSVSVEGALLAR*EQVDSWGLLIG Trigger: TCCAATGAGCAAACCCCAGGAATCCACCTGTTCTCATCTTGCCAACAATGCTCCTTCCACGGAAACTGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 72 bp | GAAGAAGCAGAAAGTGAAGACCATCTTCCCGCACACTaGGGGCTCCAACAAGACCTTACTCAGCTTTGCACA | + |
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Preference number: 6 (lower is better) Translates to: EEAESEDHLPAH*GLQQDLTQLCT Trigger: TGTGCAAAGCTGAGTAAGGTCTTGTTGGAGCCCGCAGTGTGCGGGAAGATGGTCTTCACTTTCTGCTTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS GCA 72 bp | CTGTGTTTGAATGGAGACATGAACAGCACAGCCTCGTaGTCATGGGTAGAGAGTATGGGACAAACCTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: LCLNGDMNSTAS*SWVESMGQTCP Trigger: AGGGCAGGTTTGTCCCATACTCTCTACCCATGAGCACGAGGCTGTGCTGTTCATGTCTCCATTCAAACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 72 bp | CCGTGGAAGGAGCATTGTTGGCAAGATGAGAACAGGTaGATTCCTGGGGTTTGCTCATTGGAATGTGCCTAT | + |
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Preference number: 6 (lower is better) Translates to: PWKEHCWQDENR*IPGVCSLECAY Trigger: ATAGGCACATTCCAATGAGCAAACCCCAGGAATCCACCTGTTCTCATCTTGCCAACAATGCTCCTTCCACGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS TCA 72 bp | CACTCAAACTGCTCGGGGTCCTGGTTTCTCCGTGTTTaGATCAGGTACAGACTCTCAAAGGATACGTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: HSNCSGSWFLRV*IRYRLSKDTCK Trigger: TTTACACGTATCCTTTGAGAGTCTGTACCTGATTCAAACACGGAGAAACCAGGACCCCGAGCAGTTTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539286.5 |
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| CDS CAA 90 bp | TTCCTGGGGTTTGCTCATTGGAATGTGCCTATTGATTCTCATGCTTaGAAAAGCCATTACTGCTACACTCCCTCCAACAGGTACTTCCGA | + |
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Preference number: 6 (lower is better) Translates to: FLGFAHWNVPIDSHA*KSHYCYTPSNRYFR Trigger: TCGGAAGTACCTGTTGGAGGGAGTGTAGCAGTAATGGCTTTTCAAAGCATGAGAATCAATAGGCACATTCCAATGAGCAAACCCCAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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| CDS CCA 72 bp | AAGATGAGAACAGGTGGATTCCTGGGGTTTGCTCATTaGAATGTGCCTATTGATTCTCATGCTTTGAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: KMRTGGFLGFAH*NVPIDSHALKS Trigger: GCTTTTCAAAGCATGAGAATCAATAGGCACATTCCAATGAGCAAACCCCAGGAATCCACCTGTTCTCATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485422.4 |
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