Pregenerated sensors for BRDT (Homo sapiens)
Ensembl gene IDs: ENSG00000137948Ensembl transcript IDs: ENST00000355011.7, ENST00000362005.7, ENST00000370389.6, ENST00000394530.7, ENST00000399546.7, ENST00000402388.1, ENST00000423434.5, ENST00000426141.6, ENST00000427104.5, ENST00000440509.5, ENST00000448194.6, ENST00000449584.5, ENST00000450792.5, ENST00000457265.1, ENST00000461218.5, ENST00000470955.6, ENST00000476711.5, ENST00000484833.5, ENST00000548992.5, ENST00000552654.1, ENST00000680091.1, ENST00000680541.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCGCCTGCCATCACACCCAGCTGGGCTGCAGGCACGAAGCGGGGTaGCCTTCTCAACTGCCCGGACTGTCGCACGATGTTGATGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: GACHHTQLGCRHEAG*PSQLPGLSHDVDGV Trigger: GACCCCATCAACATCGTGCGACAGTCCGGGCAGTTGAGAAGGCCACCCCGCTTCGTGCCTGCAGCCCAGCTGGGTGTGATGGCAGGCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457265.1 |
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| CDS CCA 90 bp | CGATCCACACCAGTCCAAGACCTGGGCTGCAGGCACGAAGCGGGGTaGCCTTCTCAACTGCCCGGACTGTCGCACGATGTTGATGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: RSTPVQDLGCRHEAG*PSQLPGLSHDVDGV Trigger: GACCCCATCAACATCGTGCGACAGTCCGGGCAGTTGAGAAGGCCACCCCGCTTCGTGCCTGCAGCCCAGGTCTTGGACTGGTGTGGATCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427104.5 |
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| CDS CCA 90 bp | TCCTGTCTACAAGTACATGTCCTGGGCTGCAGGCACGAAGCGGGGTaGCCTTCTCAACTGCCCGGACTGTCGCACGATGTTGATGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: SCLQVHVLGCRHEAG*PSQLPGLSHDVDGV Trigger: GACCCCATCAACATCGTGCGACAGTCCGGGCAGTTGAGAAGGCCACCCCGCTTCGTGCCTGCAGCCCAGGACATGTACTTGTAGACAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394530.7 ENST00000399546.7 |
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| CDS CCA 90 bp | CGATCCACACCAGTCCAAGACCTGGGCTGCAGGCACGAAGCGGGGTaGCCTTCTCAACTGCCCGGACTGTATGTTACCTGTATATTACAA | + |
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Preference number: 5 (lower is better) Translates to: RSTPVQDLGCRHEAG*PSQLPGLYVTCILQ Trigger: TTGTAATATACAGGTAACATACAGTCCGGGCAGTTGAGAAGGCCACCCCGCTTCGTGCCTGCAGCCCAGGTCTTGGACTGGTGTGGATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461218.5 ENST00000552654.1 |
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| CDS GCA 90 bp | AGATGGGAACACTATTTACTGCTCAGTTTTGCTGTGAACCTGGGCTaGAGGCACGAAGCGGGGTGGCCTTCTCAACTGCCCGGACTGTAT | + |
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Preference number: 5 (lower is better) Translates to: RWEHYLLLSFAVNLG*RHEAGWPSQLPGLY Trigger: ATACAGTCCGGGCAGTTGAGAAGGCCACCCCGCTTCGTGCCTGCAGCCCAGGTTCACAGCAAAACTGAGCAGTAAATAGTGTTCCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450792.5 |
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| CDS CCA 90 bp | CTGCTCAGTTTTGCTGTGAACCTGGGCTGCAGGCACGAAGCGGGGTaGCCTTCTCAACTGCCCGGACTGTATGTTACCTGTATATTACAA | + |
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Preference number: 5 (lower is better) Translates to: LLSFAVNLGCRHEAG*PSQLPGLYVTCILQ Trigger: TTGTAATATACAGGTAACATACAGTCCGGGCAGTTGAGAAGGCCACCCCGCTTCGTGCCTGCAGCCCAGGTTCACAGCAAAACTGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450792.5 |
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| CDS CCA 90 bp | TCCTGTCTACAAGTACATGTCCTGGGCTGCAGGCACGAAGCGGGGTaGCCTTCTCAACTGCCCGGACTGTATGTTACCTGTATATTACAA | + |
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Preference number: 5 (lower is better) Translates to: SCLQVHVLGCRHEAG*PSQLPGLYVTCILQ Trigger: TTGTAATATACAGGTAACATACAGTCCGGGCAGTTGAGAAGGCCACCCCGCTTCGTGCCTGCAGCCCAGGACATGTACTTGTAGACAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423434.5 |
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| CDS GCA 90 bp | CGGACTGTATGTTACCTGTATATTACAAAACCGACCTTATGTGATTaGCCCTTTCAGGCTGCACAAAATGAAGCGGTGCAGGGCAACAGT | + |
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Preference number: 5 (lower is better) Translates to: RTVCYLYITKPTLCD*PFQAAQNEAVQGNS Trigger: ACTGTTGCCCTGCACCGCTTCATTTTGTGCAGCCTGAAAGGGGCAATCACATAAGGTCGGTTTTGTAATATACAGGTAACATACAGTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000423434.5 ENST00000450792.5 ENST00000461218.5 ENST00000484833.5 ENST00000548992.5 ENST00000552654.1 |
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| CDS GCA 90 bp | CGAACTTCCCCGTCCCAAATGACCACTTGCAGAATAAACACAAAATaGCAGCTAAAGCTAAACGCTCCGTACTTTCTCCTGCATTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: RTSPSQMTTCRINTK*QLKLNAPYFLLHFQ Trigger: TTGGAAATGCAGGAGAAAGTACGGAGCGTTTAGCTTTAGCTGGCATTTTGTGTTTATTCTGCAAGTGGTCATTTGGGACGGGGAAGTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000370389.6 ENST00000427104.5 ENST00000448194.6 ENST00000461218.5 ENST00000470955.6 ENST00000476711.5 ENST00000484833.5 |
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| CDS GCA 90 bp | TTACCTGTATGTTACCTGTATATTACAAAACCGACCTTATGTGATTaGCCCTTTCAGGCTGCACAAAATGAAGCGGTGCAGGGCAACAGT | + |
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Preference number: 5 (lower is better) Translates to: LPVCYLYITKPTLCD*PFQAAQNEAVQGNS Trigger: ACTGTTGCCCTGCACCGCTTCATTTTGTGCAGCCTGAAAGGGGCAATCACATAAGGTCGGTTTTGTAATATACAGGTAACATACAGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000362005.7 ENST00000370389.6 ENST00000394530.7 ENST00000399546.7 ENST00000427104.5 ENST00000457265.1 |
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| CDS GCA 90 bp | ATAAATGAAGCAAGAACCCGAACTTCCCCGTCCCAAATGACCACTTaGAGAATAAACACAAAATGCCAGCTAAAGCTAAACGCTCCGTAC | + |
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Preference number: 5 (lower is better) Translates to: INEARTRTSPSQMTT*RINTKCQLKLNAPY Trigger: GTACGGAGCGTTTAGCTTTAGCTGGCATTTTGTGTTTATTCTGCAAGTGGTCATTTGGGACGGGGAAGTTCGGGTTCTTGCTTCATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000370389.6 ENST00000427104.5 ENST00000448194.6 ENST00000461218.5 ENST00000470955.6 ENST00000476711.5 ENST00000484833.5 |
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| CDS GCA 90 bp | TTAACAATAATAGCTGTTTGTCGACTTGGCAGAGACATTCTTAACTaGTTTGAATCCTGTCTACAAGTACATGTCCTGGGCTGCAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: LTIIAVCRLGRDILN*FESCLQVHVLGCRH Trigger: GTGCCTGCAGCCCAGGACATGTACTTGTAGACAGGATTCAAAGCAGTTAAGAATGTCTCTGCCAAGTCGACAAACAGCTATTATTGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394530.7 ENST00000399546.7 ENST00000423434.5 ENST00000440509.5 |
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| CDS TCA 90 bp | TCAGGATTGGAATTGCTCAGAGAAGGCTCTCTTGATTGTATTATGTaGACTACTCGCCCAAGTTTATCTCCAGGGAGTTTGTTTATATTC | + |
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Preference number: 5 (lower is better) Translates to: SGLELLREGSLDCIM*TTRPSLSPGSLFIF Trigger: GAATATAAACAAACTCCCTGGAGATAAACTTGGGCGAGTAGTTCACATAATACAATCAAGAGAGCCTTCTCTGAGCAATTCCAATCCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000362005.7 ENST00000370389.6 ENST00000394530.7 ENST00000399546.7 ENST00000402388.1 |
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| CDS GCA 90 bp | TTAACAATAATAGCTGTTTGTCGACTTGGCAGAGACATTCTTAACTaGTTTGAATCCTGTCTACAAGTACATGTCCACTCTGGTGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: LTIIAVCRLGRDILN*FESCLQVHVHSGAV Trigger: TACAGCACCAGAGTGGACATGTACTTGTAGACAGGATTCAAAGCAGTTAAGAATGTCTCTGCCAAGTCGACAAACAGCTATTATTGTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450792.5 |
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| CDS GCA 90 bp | TTAACAATAATAGCTGTTTGTCGACTTGGCAGAGACATTCTTAACTaGTTTGAATCCTGTCTACAAGTACATGTCCTCATCCCAGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: LTIIAVCRLGRDILN*FESCLQVHVLIPEH Trigger: ATGCTCTGGGATGAGGACATGTACTTGTAGACAGGATTCAAAGCAGTTAAGAATGTCTCTGCCAAGTCGACAAACAGCTATTATTGTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680091.1 |
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| CDS GCA 90 bp | TTAACAATAATAGCTGTTTGTCGACTTGGCAGAGACATTCTTAACTaGTTTGAATCCTGTCTACAAGTACATGTCTTTCTCCTGCATTTC | + |
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Preference number: 5 (lower is better) Translates to: LTIIAVCRLGRDILN*FESCLQVHVFLLHF Trigger: GAAATGCAGGAGAAAGACATGTACTTGTAGACAGGATTCAAAGCAGTTAAGAATGTCTCTGCCAAGTCGACAAACAGCTATTATTGTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000362005.7 ENST00000548992.5 |
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| CDS GCA 90 bp | TTAACAATAATAGCTGTTTGTCGACTTGGCAGAGACATTCTTAACTaGTTTGAATCCTGTCTACAAGTACATGTCCATGCTAAATTGTTA | + |
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Preference number: 5 (lower is better) Translates to: LTIIAVCRLGRDILN*FESCLQVHVHAKLL Trigger: TAACAATTTAGCATGGACATGTACTTGTAGACAGGATTCAAAGCAGTTAAGAATGTCTCTGCCAAGTCGACAAACAGCTATTATTGTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402388.1 |
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| CDS GCA 72 bp | TGGGCTGCAGGCACGAAGCGGGGTGGCCTTCTCAACTaGCCGGACTGTCGCACGATGTTGATGGGGTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: WAAGTKRGGLLN*PDCRTMLMGSG Trigger: CCCCGACCCCATCAACATCGTGCGACAGTCCGGGCAGTTGAGAAGGCCACCCCGCTTCGTGCCTGCAGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000362005.7 ENST00000370389.6 ENST00000394530.7 ENST00000399546.7 ENST00000427104.5 ENST00000457265.1 |
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| CDS CCA 72 bp | CCAGTCCAAGACCTGGGCTGCAGGCACGAAGCGGGGTaGCCTTCTCAACTGCCCGGACTGTCGCACGATGTT | + |
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Preference number: 6 (lower is better) Translates to: PVQDLGCRHEAG*PSQLPGLSHDV Trigger: AACATCGTGCGACAGTCCGGGCAGTTGAGAAGGCCACCCCGCTTCGTGCCTGCAGCCCAGGTCTTGGACTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427104.5 |
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| CDS CCA 72 bp | CATCACACCCAGCTGGGCTGCAGGCACGAAGCGGGGTaGCCTTCTCAACTGCCCGGACTGTCGCACGATGTT | + |
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Preference number: 6 (lower is better) Translates to: HHTQLGCRHEAG*PSQLPGLSHDV Trigger: AACATCGTGCGACAGTCCGGGCAGTTGAGAAGGCCACCCCGCTTCGTGCCTGCAGCCCAGCTGGGTGTGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457265.1 |
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| CDS CCA 72 bp | CAAGTACATGTCCTGGGCTGCAGGCACGAAGCGGGGTaGCCTTCTCAACTGCCCGGACTGTCGCACGATGTT | + |
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Preference number: 6 (lower is better) Translates to: QVHVLGCRHEAG*PSQLPGLSHDV Trigger: AACATCGTGCGACAGTCCGGGCAGTTGAGAAGGCCACCCCGCTTCGTGCCTGCAGCCCAGGACATGTACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394530.7 ENST00000399546.7 |
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| CDS CCA 72 bp | CCAGTCCAAGACCTGGGCTGCAGGCACGAAGCGGGGTaGCCTTCTCAACTGCCCGGACTGTATGTTACCTGT | + |
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Preference number: 6 (lower is better) Translates to: PVQDLGCRHEAG*PSQLPGLYVTC Trigger: ACAGGTAACATACAGTCCGGGCAGTTGAGAAGGCCACCCCGCTTCGTGCCTGCAGCCCAGGTCTTGGACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461218.5 ENST00000552654.1 |
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| CDS GCA 72 bp | GTGATTGCCCCTTTCAGGCTGCACAAAATGAAGCGGTaGAGGGCAACAGTTCTCCGCAGTTCCTCGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: VIAPFRLHKMKR*RATVLRSSSPP Trigger: TGGCGGCGAGGAACTGCGGAGAACTGTTGCCCTGCACCGCTTCATTTTGTGCAGCCTGAAAGGGGCAATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 18 transcripts: ENST00000355011.7 ENST00000362005.7 ENST00000370389.6 ENST00000394530.7 ENST00000399546.7 ENST00000423434.5 ENST00000426141.6 ENST00000427104.5 ENST00000440509.5 ENST00000448194.6 ENST00000449584.5 ENST00000450792.5 ENST00000461218.5 ENST00000470955.6 ENST00000476711.5 ENST00000484833.5 ENST00000548992.5 ENST00000552654.1 |
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| CDS CCA 72 bp | CAAGTACATGTCCTGGGCTGCAGGCACGAAGCGGGGTaGCCTTCTCAACTGCCCGGACTGTATGTTACCTGT | + |
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Preference number: 6 (lower is better) Translates to: QVHVLGCRHEAG*PSQLPGLYVTC Trigger: ACAGGTAACATACAGTCCGGGCAGTTGAGAAGGCCACCCCGCTTCGTGCCTGCAGCCCAGGACATGTACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423434.5 |
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| CDS CCA 72 bp | CCGCACCTCGGGGCCGGCCTAAGGCAGCACCCCCTGTaGAGGGTACATTACCTGTATGTTACCTGTATATTA | + |
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Preference number: 6 (lower is better) Translates to: PHLGAGLRQHPL*RVHYLYVTCIL Trigger: TAATATACAGGTAACATACAGGTAATGTACCCTCCACAGGGGGTGCTGCCTTAGGCCGGCCCCGAGGTGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000362005.7 ENST00000370389.6 ENST00000394530.7 ENST00000399546.7 ENST00000427104.5 ENST00000457265.1 |
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| CDS CAA 72 bp | CCTTTTGTAACTTGGGCCGCAGTTTGTGAACTGGAGTaGACTGAAGCTCCCTGTACCACGTTCAAGGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: PFVTWAAVCELE*TEAPCTTFKGE Trigger: TTCTCCCTTGAACGTGGTACAGGGAGCTTCAGTCAACTCCAGTTCACAAACTGCGGCCCAAGTTACAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000362005.7 ENST00000370389.6 ENST00000394530.7 ENST00000399546.7 ENST00000402388.1 ENST00000426141.6 ENST00000448194.6 ENST00000680091.1 ENST00000680541.1 |
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| CDS CAA 90 bp | CTCTTCACACCTTTTGTAACTTGGGCCGCAGTTTGTGAACTGGAGTaGACTGAAGCTCCCTGTACCACGTTCAAGGGAGAAATAGATGTC | + |
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Preference number: 6 (lower is better) Translates to: LFTPFVTWAAVCELE*TEAPCTTFKGEIDV Trigger: GACATCTATTTCTCCCTTGAACGTGGTACAGGGAGCTTCAGTCAACTCCAGTTCACAAACTGCGGCCCAAGTTACAAAAGGTGTGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000362005.7 ENST00000370389.6 ENST00000394530.7 ENST00000399546.7 ENST00000402388.1 ENST00000426141.6 ENST00000448194.6 ENST00000680091.1 ENST00000680541.1 |
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| CDS GCA 72 bp | CCGTCCCAAATGACCACTTGCAGAATAAACACAAAATaGCAGCTAAAGCTAAACGCTCCGTACTTTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PSQMTTCRINTK*QLKLNAPYFLL Trigger: CAGGAGAAAGTACGGAGCGTTTAGCTTTAGCTGGCATTTTGTGTTTATTCTGCAAGTGGTCATTTGGGACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000370389.6 ENST00000427104.5 ENST00000448194.6 ENST00000461218.5 ENST00000470955.6 ENST00000476711.5 ENST00000484833.5 |
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| CDS CCA 72 bp | CACTCTGGTGCTGTACTAGTGTTGAAACGGGGTAGATaGGAACACTATTTACTGCTCAGTTTTGCTGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: HSGAVLVLKRGR*EHYLLLSFAVN Trigger: GTTCACAGCAAAACTGAGCAGTAAATAGTGTTCCCATCTACCCCGTTTCAACACTAGTACAGCACCAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450792.5 |
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| CDS CAA 72 bp | CTGATGAACAAGGGTAGTATTGGCAGAGGTTGTGTCTaGCACACAATATCCTATCTGTGTGACGCCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LMNKGSIGRGCV*HTISYLCDACS Trigger: AGAACAGGCGTCACACAGATAGGATATTGTGTGCAAGACACAACCTCTGCCAATACTACCCTTGTTCATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000362005.7 ENST00000370389.6 ENST00000394530.7 ENST00000399546.7 ENST00000402388.1 |
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| CDS CAA 72 bp | CTACAAGTACATGTCCACTCTGGTGCTGTACTAGTGTaGAAACGGGGTAGATGGGAACACTATTTACTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LQVHVHSGAVLV*KRGRWEHYLLL Trigger: GAGCAGTAAATAGTGTTCCCATCTACCCCGTTTCAACACTAGTACAGCACCAGAGTGGACATGTACTTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450792.5 |
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| CDS CAA 90 bp | GAATCCTGTCTACAAGTACATGTCCACTCTGGTGCTGTACTAGTGTaGAAACGGGGTAGATGGGAACACTATTTACTGCTCAGTTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: ESCLQVHVHSGAVLV*KRGRWEHYLLLSFA Trigger: AGCAAAACTGAGCAGTAAATAGTGTTCCCATCTACCCCGTTTCAACACTAGTACAGCACCAGAGTGGACATGTACTTGTAGACAGGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450792.5 |
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| CDS GCA 72 bp | ATAGCTGTTTGTCGACTTGGCAGAGACATTCTTAACTaGTTTGAATCCTGTCTACAAGTACATGTCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: IAVCRLGRDILN*FESCLQVHVLG Trigger: GCCCAGGACATGTACTTGTAGACAGGATTCAAAGCAGTTAAGAATGTCTCTGCCAAGTCGACAAACAGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394530.7 ENST00000399546.7 ENST00000423434.5 ENST00000440509.5 |
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| CDS CAA 72 bp | AGCAAGAACCCGAACTTCCCCGTCCCAAATGACCACTaGCAGAATAAACACAAAATGCCAGCTAAAGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: SKNPNFPVPNDH*QNKHKMPAKAK Trigger: TTTAGCTTTAGCTGGCATTTTGTGTTTATTCTGCAAGTGGTCATTTGGGACGGGGAAGTTCGGGTTCTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000370389.6 ENST00000427104.5 ENST00000448194.6 ENST00000461218.5 ENST00000470955.6 ENST00000476711.5 ENST00000484833.5 |
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| CDS GCA 72 bp | ATAGCTGTTTGTCGACTTGGCAGAGACATTCTTAACTaGTTTGAATCCTGTCTACAAGTACATGTCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: IAVCRLGRDILN*FESCLQVHVLR Trigger: CCTGAGGACATGTACTTGTAGACAGGATTCAAAGCAGTTAAGAATGTCTCTGCCAAGTCGACAAACAGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449584.5 |
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| CDS GCA 72 bp | ATAGCTGTTTGTCGACTTGGCAGAGACATTCTTAACTaGTTTGAATCCTGTCTACAAGTACATGTCCATGCT | + |
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Preference number: 6 (lower is better) Translates to: IAVCRLGRDILN*FESCLQVHVHA Trigger: AGCATGGACATGTACTTGTAGACAGGATTCAAAGCAGTTAAGAATGTCTCTGCCAAGTCGACAAACAGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402388.1 |
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| CDS GCA 72 bp | ATAGCTGTTTGTCGACTTGGCAGAGACATTCTTAACTaGTTTGAATCCTGTCTACAAGTACATGTCCACTCT | + |
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Preference number: 6 (lower is better) Translates to: IAVCRLGRDILN*FESCLQVHVHS Trigger: AGAGTGGACATGTACTTGTAGACAGGATTCAAAGCAGTTAAGAATGTCTCTGCCAAGTCGACAAACAGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450792.5 |
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| CDS GCA 72 bp | ATAGCTGTTTGTCGACTTGGCAGAGACATTCTTAACTaGTTTGAATCCTGTCTACAAGTACATGTCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: IAVCRLGRDILN*FESCLQVHVFL Trigger: GAGAAAGACATGTACTTGTAGACAGGATTCAAAGCAGTTAAGAATGTCTCTGCCAAGTCGACAAACAGCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000362005.7 ENST00000548992.5 |
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| CDS GCA 72 bp | ATAGCTGTTTGTCGACTTGGCAGAGACATTCTTAACTaGTTTGAATCCTGTCTACAAGTACATGTCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: IAVCRLGRDILN*FESCLQVHVLF Trigger: AAAGAGGACATGTACTTGTAGACAGGATTCAAAGCAGTTAAGAATGTCTCTGCCAAGTCGACAAACAGCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000355011.7 ENST00000427104.5 ENST00000448194.6 ENST00000457265.1 ENST00000470955.6 |
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| CDS GCA 72 bp | ATAGCTGTTTGTCGACTTGGCAGAGACATTCTTAACTaGTTTGAATCCTGTCTACAAGTACATGTCCTTATG | + |
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Preference number: 6 (lower is better) Translates to: IAVCRLGRDILN*FESCLQVHVLM Trigger: CATAAGGACATGTACTTGTAGACAGGATTCAAAGCAGTTAAGAATGTCTCTGCCAAGTCGACAAACAGCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426141.6 |
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| CDS CAA 72 bp | ATAAAGGCATACTCTCAACAGGTTCAATCGGGATCTTaGAAAAATGCGTTTCGAAAACATCCTGAAGCATTC | + |
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Preference number: 6 (lower is better) Translates to: IKAYSQQVQSGS*KNAFRKHPEAF Trigger: GAATGCTTCAGGATGTTTTCGAAACGCATTTTTCAAAGATCCCGATTGAACCTGTTGAGAGTATGCCTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000362005.7 ENST00000370389.6 ENST00000394530.7 ENST00000399546.7 ENST00000402388.1 ENST00000426141.6 ENST00000680091.1 ENST00000680541.1 |
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| CDS GCA 72 bp | TTTCAAAGTCTATCTCTATCTCATCAGGATTGGAATTaGTCAGAGAAGGCTCTCTTGATTGTATTATGTGAA | + |
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Preference number: 6 (lower is better) Translates to: FQSLSLSHQDWN*SEKALLIVLCE Trigger: TTCACATAATACAATCAAGAGAGCCTTCTCTGAGCAATTCCAATCCTGATGAGATAGAGATAGACTTTGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000362005.7 ENST00000370389.6 ENST00000394530.7 ENST00000399546.7 ENST00000402388.1 |
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