RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRD8 (Homo sapiens)

Ensembl gene IDs: ENSG00000112983

Ensembl transcript IDs: ENST00000230901.9, ENST00000254900.10, ENST00000402931.5, ENST00000411594.6, ENST00000418329.5, ENST00000425764.5, ENST00000427976.1, ENST00000428808.5, ENST00000430331.1, ENST00000432618.5, ENST00000441656.5, ENST00000450756.5, ENST00000453824.1, ENST00000454473.5, ENST00000463620.1, ENST00000471437.1, ENST00000471892.6, ENST00000472478.6, ENST00000483805.1, ENST00000489351.1, ENST00000506167.5, ENST00000512140.5, ENST00000515014.5, ENST00000515254.1

Found 1171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGTaGCCAGAAGCCACAGCCATTTCACTCTCATTGACCCCAGAGGTA +
Preference number: 1 (lower is better)
Translates to: GRTPPTSRRTPVLFR*PEATAISLSLTPEV
Trigger: TACCTCTGGGGTCAATGAGAGTGAAATGGCTGTGGCTTCTGGCCACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
3UTR CCA 90 bp GCAGAGGATGGTGCTGGCAGCGCAGGCATCATGACAATGGTAGCTTaGGACACAGACTCTACAGGGGGTGGCACAAGTTTAACTGGAGGC +
Preference number: 1 (lower is better)
Translates to: AEDGAGSAGIMTMVA*DTDSTGGGTSLTGG
Trigger: GCCTCCAGTTAAACTTGTGCCACCCCCTGTAGAGTCTGTGTCCCAAGCTACCATTGTCATGATGCCTGCGCTGCCAGCACCATCCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CCA 90 bp AGCTACACTTTCAGTAGTGGAGACAGCCGGAGCAGAGGATGGTGCTaGCAGCGCAGGCATCATGACAATGGTAGCTTGGGACACAGACTC +
Preference number: 1 (lower is better)
Translates to: SYTFSSGDSRSRGWC*QRRHHDNGSLGHRL
Trigger: GAGTCTGTGTCCCAAGCTACCATTGTCATGATGCCTGCGCTGCCAGCACCATCCTCTGCTCCGGCTGTCTCCACTACTGAAAGTGTAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR GCA 90 bp CGTTTCCTCAAAGTCCAGTCTCTCTTGCTTGACCGTCATTTCTGGTaGAGGGAGAGGTACTGGCTTGTCCCGCTCCTGCTGGATAGGATG +
Preference number: 1 (lower is better)
Translates to: RFLKVQSLLLDRHFW*RERYWLVPLLLDRM
Trigger: CATCCTATCCAGCAGGAGCGGGACAAGCCAGTACCTCTCCCTGCACCAGAAATGACGGTCAAGCAAGAGAGACTGGACTTTGAGGAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CCA 90 bp AAAGAGTGGGAGCACCTGATGCAGCAGGGGAGGCTGCAACAGTATTaGGTGTTTGCTGTATCTCCCCACCATGTATCATGGGAAGGACCC +
Preference number: 1 (lower is better)
Translates to: KEWEHLMQQGRLQQY*VFAVSPHHVSWEGP
Trigger: GGGTCCTTCCCATGATACATGGTGGGGAGATACAGCAAACACCCAATACTGTTGCAGCCTCCCCTGCTGCATCAGGTGCTCCCACTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CCA 90 bp TTCCGTTTCCTCAAAGTCCAGTCTCTCTTGCTTGACCGTCATTTCTaGTGCAGGGAGAGGTACTGGCTTGTCCCGCTCCTGCTGGATAGG +
Preference number: 1 (lower is better)
Translates to: FRFLKVQSLLLDRHF*CRERYWLVPLLLDR
Trigger: CCTATCCAGCAGGAGCGGGACAAGCCAGTACCTCTCCCTGCACCAGAAATGACGGTCAAGCAAGAGAGACTGGACTTTGAGGAAACGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CCA 90 bp CCCAGAGGTAGCCTCTTCCATAGTGGTTGGAGTCAAGTCCCCAAGTaGATAATCACCTCCTGGGGAGGCAGAATCTATAGGAGAGCGAAC +
Preference number: 1 (lower is better)
Translates to: PRGSLFHSGWSQVPK*IITSWGGRIYRRAN
Trigger: GTTCGCTCTCCTATAGATTCTGCCTCCCCAGGAGGTGATTATCCACTTGGGGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
3UTR CCA 90 bp CTGCAACAGTATTGGGTGTTTGCTGTATCTCCCCACCATGTATCATaGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCA +
Preference number: 1 (lower is better)
Translates to: LQQYWVFAVSPHHVS*EGPRLPPGGHLYCS
Trigger: TGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATACATGGTGGGGAGATACAGCAAACACCCAATACTGTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CCA 90 bp GGTAGCTTGGGACACAGACTCTACAGGGGGTGGCACAAGTTTAACTaGAGGCTCACTGGCAACAGTAGTGAAGGAAGCAAGAGGTGTGGT +
Preference number: 1 (lower is better)
Translates to: GSLGHRLYRGWHKFN*RLTGNSSEGSKRCG
Trigger: ACCACACCTCTTGCTTCCTTCACTACTGTTGCCAGTGAGCCTCCAGTTAAACTTGTGCCACCCCCTGTAGAGTCTGTGTCCCAAGCTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR TCA 90 bp CTCCATACTTGTGGCTGGAACAACTCCAGCTACTATTTCGGCTCCTaGAATGACTGGCTCTGGTTCTGCAGGTTCCACCTTGATCTCTGC +
Preference number: 1 (lower is better)
Translates to: LHTCGWNNSSYYFGS*NDWLWFCRFHLDLC
Trigger: GCAGAGATCAAGGTGGAACCTGCAGAACCAGAGCCAGTCATTTCAGGAGCCGAAATAGTAGCTGGAGTTGTTCCAGCCACAAGTATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTaGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTTTTAT +
Preference number: 1 (lower is better)
Translates to: HVVWPRYLLFCNFHL*NWARKPKLYLVYFY
Trigger: ATAAAAGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR CCA 90 bp GTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTCATGTCGTGTaGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGG +
Preference number: 1 (lower is better)
Translates to: VLLQLSKRDFPAHVV*PRYLLFCNFHLWNW
Trigger: CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR CCA 90 bp AGGCATCATGACAATGGTAGCTTGGGACACAGACTCTACAGGGGGTaGCACAAGTTTAACTGGAGGCTCACTGGCAACAGTAGTGAAGGA +
Preference number: 1 (lower is better)
Translates to: RHHDNGSLGHRLYRG*HKFNWRLTGNSSEG
Trigger: TCCTTCACTACTGTTGCCAGTGAGCCTCCAGTTAAACTTGTGCCACCCCCTGTAGAGTCTGTGTCCCAAGCTACCATTGTCATGATGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR TCA 90 bp ACAATCTCTCCAGCTGCAGTACTTCCCAGTTCCTCATCTAAGTCCTaGCTCCTGAGTTCTGGTGGCTCCATACTTGTGGCTGGAACAACT +
Preference number: 1 (lower is better)
Translates to: TISPAAVLPSSSSKS*LLSSGGSILVAGTT
Trigger: AGTTGTTCCAGCCACAAGTATGGAGCCACCAGAACTCAGGAGTCAGGACTTAGATGAGGAACTGGGAAGTACTGCAGCTGGAGAGATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CCA 90 bp TATCCATCTTCTCAGCCAGATCTAATTCTTCCTTCCCATCTATGCTaGGAGCCTTTGATCCAACAGGAGCCTCTGCTACCCCTGATCGAA +
Preference number: 1 (lower is better)
Translates to: YPSSQPDLILPSHLC*EPLIQQEPLLPLIE
Trigger: TTCGATCAGGGGTAGCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAGAATTAGATCTGGCTGAGAAGATGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR GCA 90 bp CACATTTGTAAGTGGAGTCTCATCGCCTTTCCCAATGGCAACATCTaGTTCAACAATCTCTCCAGCTGCAGTACTTCCCAGTTCCTCATC +
Preference number: 1 (lower is better)
Translates to: HICKWSLIAFPNGNI*FNNLSSCSTSQFLI
Trigger: GATGAGGAACTGGGAAGTACTGCAGCTGGAGAGATTGTTGAAGCAGATGTTGCCATTGGGAAAGGCGATGAGACTCCACTTACAAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR GCA 90 bp TCTCTCCCTCGAAGACTTTTAGCACTGATCCCAGACTCGGATGTTTaGATAATCAACTGCGTGGCCAAGAATTGCTGGATCTGTTCCAAG +
Preference number: 1 (lower is better)
Translates to: SLPRRLLALIPDSDV*IINCVAKNCWICSK
Trigger: CTTGGAACAGATCCAGCAATTCTTGGCCACGCAGTTGATTATGCAAACATCCGAGTCTGGGATCAGTGCTAAAAGTCTTCGAGGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR GCA 90 bp GTTTTCCATGAGATCAGGACAATTAGAAGGCTTCTTTCCATCTGCTaGTCTCTCCCTGCAGCCCAGCTCCTTCCTCTTGTGCAATATTTT +
Preference number: 1 (lower is better)
Translates to: VFHEIRTIRRLLSIC*SLPAAQLLPLVQYF
Trigger: AAAATATTGCACAAGAGGAAGGAGCTGGGCTGCAGGGAGAGAGCAGCAGATGGAAAGAAGCCTTCTAATTGTCCTGATCTCATGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472478.6
3UTR CCA 90 bp ACATTTCAAACTTGTGCTGAGTCTCTGCCTCTAAAGGATCTTCAATaGGATTTGAGCCATGTGATGGAGACAACATGCTTTCAGGGGATG +
Preference number: 1 (lower is better)
Translates to: TFQTCAESLPLKDLQ*DLSHVMETTCFQGM
Trigger: CATCCCCTGAAAGCATGTTGTCTCCATCACATGGCTCAAATCCCATTGAAGATCCTTTAGAGGCAGAGACTCAGCACAAGTTTGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR GCA 90 bp CCAATTTCTTTTTCGTTGCAATGTCATTGCAAAGCTCATCCAGTCTaGTGTCCATGTGTCCAGCTTGAATTAGTTCTGCATCTCTCTTTA +
Preference number: 1 (lower is better)
Translates to: PISFSLQCHCKAHPV*CPCVQLELVLHLSL
Trigger: TAAAGAGAGATGCAGAACTAATTCAAGCTGGACACATGGACAGCAGACTGGATGAGCTTTGCAATGACATTGCAACGAAAAAGAAATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000428808.5
ENST00000432618.5
ENST00000450756.5
ENST00000512140.5
3UTR CAA 90 bp CTCTCTTGCTTGACCGTCATTTCTGGTGCAGGGAGAGGTACTGGCTaGTCCCGCTCCTGCTGGATAGGATGCTCCCAGGGGCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: LSCLTVISGAGRGTG*SRSCWIGCSQGPGR
Trigger: CCTGCCTGGCCCCTGGGAGCATCCTATCCAGCAGGAGCGGGACAAGCCAGTACCTCTCCCTGCACCAGAAATGACGGTCAAGCAAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR CCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCTTCCACCTCTGGAACTaGGCCCGCAAGCCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWAFHLWN*ARKPKL
Trigger: GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAA...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR CCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGTTCCACCTCTGGAACTaGGCCCGCAAGCCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKFHLWN*ARKPKL
Trigger: GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAA...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR CCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGTTCCACCTCTGGAACTaGGCCCGCAAGCCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWFHLWN*ARKPKL
Trigger: GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAA...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR CCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCTGTAACTTCCACCTCTaGAACTGGGCCCGCAAGCCC +
Preference number: 2 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWACNFHL*NWARKP
Trigger: GGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACA...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR CCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGTGTAACTTCCACCTCTaGAACTGGGCCCGCAAGCCC +
Preference number: 2 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWCNFHL*NWARKP
Trigger: GGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACA...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR CCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGTGTAACTTCCACCTCTaGAACTGGGCCCGCAAGCCC +
Preference number: 2 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKCNFHL*NWARKP
Trigger: GGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACA...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR CCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCCAGCTCATGTCGTGTaGCCCAGGTACCTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKPAHVV*PRYLLF
Trigger: GAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR CCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGCCAGCTCATGTCGTGTaGCCCAGGTACCTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWPAHVV*PRYLLF
Trigger: GAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR CAA 90 bp AGCAGAGGATGGTGCTGGCAGCGCAGGCATCATGACAATGGTAGCTaGGGACACAGACTCTACAGGGGGTGGCACAAGTTTAACTGGAGG +
Preference number: 2 (lower is better)
Translates to: SRGWCWQRRHHDNGS*GHRLYRGWHKFNWR
Trigger: CCTCCAGTTAAACTTGTGCCACCCCCTGTAGAGTCTGTGTCCCAAGCTACCATTGTCATGATGCCTGCGCTGCCAGCACCATCCTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CAA 90 bp GAAAGAGTGGGAGCACCTGATGCAGCAGGGGAGGCTGCAACAGTATaGGGTGTTTGCTGTATCTCCCCACCATGTATCATGGGAAGGACC +
Preference number: 2 (lower is better)
Translates to: ERVGAPDAAGEAATV*GVCCISPPCIMGRT
Trigger: GGTCCTTCCCATGATACATGGTGGGGAGATACAGCAAACACCCAATACTGTTGCAGCCTCCCCTGCTGCATCAGGTGCTCCCACTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR TCA 90 bp CCTCTGCACAATGCTGTGGTAGCCAGGTGCTATGTCATCTGTAACAGGCTGCAGACAGACAGAGAACTGTaGAGAAGCAGGGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: PLHNAVVARCYVICNRLQTDREL*RSRAAG
Trigger: CCCAGCAGCCCTGCTTCTTCACAGTTCTCTGTCTGT...CTGCAGCCTGTTACAGATGACATAGCACCTGGCTACCACAGCATTGTGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
3UTR-3UTR CCA 90 bp TTTTTCATCTTCATATCTGCTTCAATGGCACAGCGGCGTCCCCTGGTTCCTCCATTCCACCTCTGGAACTaGGCCCGCAAGCCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: FFIFISASMAQRRPLVPPFHLWN*ARKPKL
Trigger: GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAA...TGGAGGAACCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR CCA 90 bp TTTTCATCTTCATATCTGCTTCAATGGCACAGCGGCGTCCCCTGGTTCCTCCATTGTAACTTCCACCTCTaGAACTGGGCCCGCAAGCCC +
Preference number: 2 (lower is better)
Translates to: FSSSYLLQWHSGVPWFLHCNFHL*NWARKP
Trigger: GGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACA...ATGGAGGAACCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR CCA 90 bp CTTTTTCATCTTCATATCTGCTTCAATGGCACAGCGGCGTCCCCTGGTTCCTCCTCATATCTGCTTCAATaGCACAGCGGCGTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: LFHLHICFNGTAASPGSSSYLLQ*HSGVPW
Trigger: CCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGA...GGAGGAACCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000472478.6
ENST00000512140.5
3UTR CAA 90 bp ATTTCGGCTCCTGAAATGACTGGCTCTGGTTCTGCAGGTTCCACCTaGATCTCTGCACTGGGCTCCCTGATGTCCACCAGTTCATGTATT +
Preference number: 2 (lower is better)
Translates to: ISAPEMTGSGSAGST*ISALGSLMSTSSCI
Trigger: AATACATGAACTGGTGGACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAACCTGCAGAACCAGAGCCAGTCATTTCAGGAGCCGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR TCA 90 bp ATCCATAGGCCTCTGCACAATGCTGTGGTAGCCAGGTGCTATGTCATCTGTAACGTCTGCCAGTGTGTGTaGCTGCAGTGTAGCATTGTG +
Preference number: 2 (lower is better)
Translates to: IHRPLHNAVVARCYVICNVCQCV*LQCSIV
Trigger: CACAATGCTACACTGCAGTCACACACACTGGCAGAC...GTTACAGATGACATAGCACCTGGCTACCACAGCATTGTGCAGAGGCCTATGGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
3UTR-3UTR TCA 90 bp GTGGTAGCCAGGTGCTATGTCATCTGTAACAGGCTGCAGGAAGACATTGGCATAGTCTGCCAGTGTGTGTaGCTGCAGTGTAGCATTGTG +
Preference number: 2 (lower is better)
Translates to: VVARCYVICNRLQEDIGIVCQCV*LQCSIV
Trigger: CACAATGCTACACTGCAGTCACACACACTGGCAGAC...TATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCTGGCTACCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
3UTR-3UTR TCA 90 bp GCAGGTTCCACCTTGATCTCTGCACTGGGCTCCCTGATGTCCACCAGTTCATGTACATTGGCATACCTATaGTTAGCTGCAGCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: AGSTLISALGSLMSTSSCTLAYL*LAAALH
Trigger: ATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGT...ACATGAACTGGTGGACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR TCA 90 bp TGGCCAAGAATTGCTGGATCTGTTCCAAGACATCTCGCTGCATCTCCACTGCCAACACAGTTGTCGGGTTaGCTCACTGGAGCTACACTT +
Preference number: 2 (lower is better)
Translates to: WPRIAGSVPRHLAASPLPTQLSG*LTGATL
Trigger: AAGTGTAGCTCCAGTGAGTCAACCCGACAACTGTGT...TGGCAGTGGAGATGCAGCGAGATGTCTTGGAACAGATCCAGCAATTCTTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR GCA 90 bp CATGTATCATGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCATCGTTGCAATGTCATTaGAAAGCTCATCCAGTCTGC +
Preference number: 2 (lower is better)
Translates to: HVSWEGPRLPPGGHLYCSSLQCH*KAHPVC
Trigger: GCAGACTGGATGAGCTTTGCAATGACATTGCAACGA...TGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
3UTR-3UTR CCA 90 bp TGGCCAAGAATTGCTGGATCTGTTCCAAGACATCTCGCTGCATCTCCACTGCCACTCTTCCATAGTGGTTaGAGTCAAGTCCCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: WPRIAGSVPRHLAASPLPLFHSG*SQVPKW
Trigger: CCACTTGGGGACTTGACTCCAACCACTATGGAAGAG...TGGCAGTGGAGATGCAGCGAGATGTCTTGGAACAGATCCAGCAATTCTTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CAA 90 bp ATCTCTGCACTGGGCTCCCTGATGTCCACCAGTTCATGTATTCCCTaGTTTTCCGTTTCCTCAAAGTCCAGTCTCTCTTGCTTGACCGTC +
Preference number: 2 (lower is better)
Translates to: ISALGSLMSTSSCIP*FSVSSKSSLSCLTV
Trigger: GACGGTCAAGCAAGAGAGACTGGACTTTGAGGAAACGGAAAACAAGGGAATACATGAACTGGTGGACATCAGGGAGCCCAGTGCAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR GCA 90 bp GACCCCAGAGGTAGCCTCTTCCATAGTGGTTGGAGTCAAGTCCCCAAGTGGATATCGTTGCAATGTCATTaGAAAGCTCATCCAGTCTGC +
Preference number: 2 (lower is better)
Translates to: DPRGSLFHSGWSQVPKWISLQCH*KAHPVC
Trigger: GCAGACTGGATGAGCTTTGCAATGACATTGCAACGA...TATCCACTTGGGGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
3UTR-3UTR GCA 90 bp TTTTCATCTTCATATCTGCTTCAATGGCACAGCGGCGTCCCCTGGTTCCTCCATAAGAAAGGCCTTTCCTaGAGACTGACCCTGGCACTA +
Preference number: 2 (lower is better)
Translates to: FSSSYLLQWHSGVPWFLHKKGLS*RLTLAL
Trigger: TAGTGCCAGGGTCAGTCTGCAGGAAAGGCCTTTCTT...ATGGAGGAACCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472478.6
3UTR-3UTR GCA 90 bp CTTTTTCATCTTCATATCTGCTTCAATGGCACAGCGGCGTCCCCTGGTTCCTCCGCCAGTGTGTGTGACTaGAGTGTAGCATTGTGTATG +
Preference number: 2 (lower is better)
Translates to: LFHLHICFNGTAASPGSSASVCD*SVALCM
Trigger: CATACACAATGCTACACTGCAGTCACACACACTGGC...GGAGGAACCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR GCA 90 bp TGGCCAAGAATTGCTGGATCTGTTCCAAGACATCTCGCTGCATCTCCACTGCCACCCAATGGCAACATCTaGTTCAACAATCTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: WPRIAGSVPRHLAASPLPPNGNI*FNNLSS
Trigger: GCTGGAGAGATTGTTGAAGCAGATGTTGCCATTGGG...TGGCAGTGGAGATGCAGCGAGATGTCTTGGAACAGATCCAGCAATTCTTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR CCA 90 bp ATTGGCATACCTATGATTAGCTGCAGCTCTCCATACAAGCATGATGGCTTTCTTCAGGGCTGCTGGGGATaGAGTCTGCCAGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: IGIPMISCSSPYKHDGFLQGCWG*SLPVCV
Trigger: CACACACACTGGCAGACTCCATCCCCAGCAGCCCTG...AAGAAAGCCATCATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
3UTR CAA 90 bp TCTCAGCCAGATCTAATTCTTCCTTCCCATCTATGCTGGGAGCCTTaGATCCAACAGGAGCCTCTGCTACCCCTGATCGAAAACACTCTT +
Preference number: 2 (lower is better)
Translates to: SQPDLILPSHLCWEP*IQQEPLLPLIENTL
Trigger: AAGAGTGTTTTCGATCAGGGGTAGCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAGAATTAGATCTGGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR GCA 90 bp CTCTTCCATAGTGGTTGGAGTCAAGTCCCCAAGTGGATAATCACCTCCTGGGGATTTCATCTTCATATCTaGTTCAATGGCACAGCGGCG +
Preference number: 2 (lower is better)
Translates to: LFHSGWSQVPKWIITSWGFHLHI*FNGTAA
Trigger: CGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAA...TCCCCAGGAGGTGATTATCCACTTGGGGACTTGACTCCAACCACTATGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR GCA 90 bp CATGTATCATGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAATACCTATGATTAGCTaGAGCTCTCCATACAAGCAT +
Preference number: 2 (lower is better)
Translates to: HVSWEGPRLPPGGHLYCSIPMIS*SSPYKH
Trigger: ATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTAT...TGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR CCA 90 bp TCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCATGTAACTTCCACCTCTaGAACTGGGCCCGCAAGCCC +
Preference number: 2 (lower is better)
Translates to: SALKQAIVLLQLSKRDFPCNFHL*NWARKP
Trigger: GGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACA...TGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR CCA 90 bp CCATGTGTCCAGCTTGAATTAGTTCTGCATCTCTCTTTAGCCGTCTATATCTCTTTGAGAGAACCAGTCTaGAGGGCGGCCAGGTTCTGC +
Preference number: 2 (lower is better)
Translates to: PCVQLELVLHLSLAVYISLREPV*RAARFC
Trigger: GCAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAA...AGAGATATAGACGGCTAAAGAGAGATGCAGAACTAATTCAAGCTGGACACATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000450756.5
3UTR-3UTR TCA 90 bp TTCCGTTTTGGTGTCTCAGTGGTCTCTAAAAGCTCCGAGTACTGGGAAGCACAAGAAGCACAATGTTTTTaGGAGAACCAGTCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: FRFGVSVVSKSSEYWEAQEAQCF*ENQSGG
Trigger: CCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTC...TTGTGCTTCCCAGTACTCGGAGCTTTTAGAGACCACTGAGACACCAAAACGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000450756.5
3UTR-3UTR TCA 90 bp GCCAGGTGCTATGTCATCTGTAACAGGCTGCAGGAAGACATTGGCATACCTATGTCCATGTGTCCAGCTTaGATTAGTTCTGCATCTCTC +
Preference number: 2 (lower is better)
Translates to: ARCYVICNRLQEDIGIPMSMCPA*ISSASL
Trigger: GAGAGATGCAGAACTAATTCAAGCTGGACACATGGA...CATAGGTATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCTGGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR TCA 90 bp ATTGGCATACCTATGATTAGCTGCAGCTCTCCATACAAGCATGATGGCTTTCTTACAGACAGAGAACTGTaGAGAAGCAGGGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: IGIPMISCSSPYKHDGFLTDREL*RSRAAG
Trigger: CCCAGCAGCCCTGCTTCTTCACAGTTCTCTGTCTGT...AAGAAAGCCATCATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
3UTR-3UTR CCA 90 bp CTTCCAATTTCTTTTTCGTTGCAATGTCATTGCAAAGCTCATCCAGTCTGCTGTTTGAGAGAACCAGTCTaGAGGGCGGCCAGGTTCTGC +
Preference number: 2 (lower is better)
Translates to: LPISFSLQCHCKAHPVCCLREPV*RAARFC
Trigger: GCAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAA...ACAGCAGACTGGATGAGCTTTGCAATGACATTGCAACGAAAAAGAAATTGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000450756.5
3UTR CAA 90 bp ATCTCTCCCTCGAAGACTTTTAGCACTGATCCCAGACTCGGATGTTaGCATAATCAACTGCGTGGCCAAGAATTGCTGGATCTGTTCCAA +
Preference number: 2 (lower is better)
Translates to: ISPSKTFSTDPRLGC*HNQLRGQELLDLFQ
Trigger: TTGGAACAGATCCAGCAATTCTTGGCCACGCAGTTGATTATGCAAACATCCGAGTCTGGGATCAGTGCTAAAAGTCTTCGAGGGAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR TCA 90 bp GTTTTGGTGTCTCAGTGGTCTCTAAAAGCTCCGAGTACTGGGAAGCACAATGTTGAAGCACAATGTTTTTaGGAGAACCAGTCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: VLVSQWSLKAPSTGKHNVEAQCF*ENQSGG
Trigger: CCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTC...AACATTGTGCTTCCCAGTACTCGGAGCTTTTAGAGACCACTGAGACACCAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000450756.5
3UTR-3UTR GCA 90 bp TTTTCATCTTCATATCTGCTTCAATGGCACAGCGGCGTCCCCTGGTTCCTCCATATAGCCCATGGTTTCTaGCCTAAAACAGGCAATTGT +
Preference number: 2 (lower is better)
Translates to: FSSSYLLQWHSGVPWFLHIAHGF*PKTGNC
Trigger: ACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTAT...ATGGAGGAACCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR GCA 90 bp CTTTTTCATCTTCATATCTGCTTCAATGGCACAGCGGCGTCCCCTGGTTCCTCCTCATGGATATTTCACTaGTGTCCATGGAAACAGTCA +
Preference number: 2 (lower is better)
Translates to: LFHLHICFNGTAASPGSSSWIFH*CPWKQS
Trigger: TGACTGTTTCCATGGACAGCAGTGAAATATCCATGA...GGAGGAACCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR CCA 90 bp AAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTCTGTTCCACCTCTGGAACTaGGCCCGCAAGCCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: KLYLVYFYFRFGSKRVTLFHLWN*ARKPKL
Trigger: GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAA...CAGAGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR TCA 90 bp ATCACTTTCTTTAGTTCTTCAACTCGCTCAGCAGTCAATTTCCGAACAATAACAGATTGCTCTGCTAACTaGTACCCTGCGGCCTGTGGT +
Preference number: 2 (lower is better)
Translates to: ITFFSSSTRSAVNFRTITDCSAN*YPAACG
Trigger: ACCACAGGCCGCAGGGTATCAGTTAGCAGAGCAATC...TGTTATTGTTCGGAAATTGACTGCTGAGCGAGTTGAAGAACTAAAGAAAGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450756.5
3UTR-3UTR GCA 90 bp CTCTTCCATAGTGGTTGGAGTCAAGTCCCCAAGTGGATAATCACCTCCTGGGGACAATTTCTTTTTCGTTaGAATGTCATTGCAAAGCTC +
Preference number: 2 (lower is better)
Translates to: LFHSGWSQVPKWIITSWGQFLFR*NVIAKL
Trigger: GAGCTTTGCAATGACATTGCAACGAAAAAGAAATTG...TCCCCAGGAGGTGATTATCCACTTGGGGACTTGACTCCAACCACTATGGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
3UTR-3UTR GCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTTTTCATCTTCATATCTaGTTCAATGGCACAGCGGCG +
Preference number: 2 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPAFHLHI*FNGTAA
Trigger: CGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAA...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR GCA 90 bp ATTGGCATACCTATGATTAGCTGCAGCTCTCCATACAAGCATGATGGCTTTCTTGCCAGTGTGTGTGACTaGAGTGTAGCATTGTGTATG +
Preference number: 2 (lower is better)
Translates to: IGIPMISCSSPYKHDGFLASVCD*SVALCM
Trigger: CATACACAATGCTACACTGCAGTCACACACACTGGC...AAGAAAGCCATCATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
3UTR-3UTR CCA 90 bp TCTAAAGGATCTTCAATGGGATTTGAGCCATGTGATGGAGACAACATGCTTTCACCTTCCCATCTATGCTaGGAGCCTTTGATCCAACAG +
Preference number: 2 (lower is better)
Translates to: SKGSSMGFEPCDGDNMLSPSHLC*EPLIQQ
Trigger: CTGTTGGATCAAAGGCTCCCAGCATAGATGGGAAGG...TGAAAGCATGTTGTCTCCATCACATGGCTCAAATCCCATTGAAGATCCTTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR TCA 90 bp CCATGTGATGGAGACAACATGCTTTCAGGGGATGCCTCTGTCTTCACATTTGTACTCTCCATACAAGCATaGTGGCTTTCTTCCAAATTT +
Preference number: 2 (lower is better)
Translates to: PCDGDNMLSGDASVFTFVLSIQA*WLSSKF
Trigger: AAATTTGGAAGAAAGCCATCATGCTTGTATGGAGAG...TACAAATGTGAAGACAGAGGCATCCCCTGAAAGCATGTTGTCTCCATCACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR CCA 90 bp TCTAAAGGATCTTCAATGGGATTTGAGCCATGTGATGGAGACAACATGCTTTCATGGATAATCACCTCCTaGGGAGGCAGAATCTATAGG +
Preference number: 2 (lower is better)
Translates to: SKGSSMGFEPCDGDNMLSWIITS*GGRIYR
Trigger: CCTATAGATTCTGCCTCCCCAGGAGGTGATTATCCA...TGAAAGCATGTTGTCTCCATCACATGGCTCAAATCCCATTGAAGATCCTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR CCA 90 bp TCTAAAGGATCTTCAATGGGATTTGAGCCATGTGATGGAGACAACATGCTTTCAGTCGGGTTGACTCACTaGAGCTACACTTTCAGTAGT +
Preference number: 2 (lower is better)
Translates to: SKGSSMGFEPCDGDNMLSVGLTH*SYTFSS
Trigger: ACTACTGAAAGTGTAGCTCCAGTGAGTCAACCCGAC...TGAAAGCATGTTGTCTCCATCACATGGCTCAAATCCCATTGAAGATCCTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR TCA 90 bp AGGTGCTATGTCATCTGTAACAGGCTGCAGGAAGACATTGGCATACCTATGATTTTCATTATCCATTTCTaGCAAGTAGCCTTCTCCTTG +
Preference number: 2 (lower is better)
Translates to: RCYVICNRLQEDIGIPMIFIIHF*QVAFSL
Trigger: CAAGGAGAAGGCTACTTGTCAGAAATGGATAATGAA...AATCATAGGTATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
3UTR-3UTR GCA 90 bp AAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTCTGATAGCCCATGGTTTCTaGCCTAAAACAGGCAATTGT +
Preference number: 2 (lower is better)
Translates to: KLYLVYFYFRFGSKRVTLIAHGF*PKTGNC
Trigger: ACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTAT...CAGAGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR CAA 90 bp CATGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGTGGCCGACTGCAGTGTAGCATaGTGTATGCTGAAGCCATCA +
Preference number: 3 (lower is better)
Translates to: HGKDPAYLQEDTCTVQVADCSVA*CMLKPS
Trigger: TGATGGCTTCAGCATACACAATGCTACACTGCAGTC...GGCCACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CCA 72 bp TATTGGGTGTTTGCTGTATCTCCCCACCATGTATCATaGGAAGGACCCCGCCTACCTCCAGGAGGACACCTG +
Preference number: 3 (lower is better)
Translates to: YWVFAVSPHHVS*EGPRLPPGGHL
Trigger: CAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATACATGGTGGGGAGATACAGCAAACACCCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR GCA 72 bp GATGCAGCAGGGGAGGCTGCAACAGTATTGGGTGTTTaGTGTATCTCCCCACCATGTATCATGGGAAGGACC +
Preference number: 3 (lower is better)
Translates to: DAAGEAATVLGV*CISPPCIMGRT
Trigger: GGTCCTTCCCATGATACATGGTGGGGAGATACAGCAAACACCCAATACTGTTGCAGCCTCCCCTGCTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CCA 72 bp GAGCACCTGATGCAGCAGGGGAGGCTGCAACAGTATTaGGTGTTTGCTGTATCTCCCCACCATGTATCATGG +
Preference number: 3 (lower is better)
Translates to: EHLMQQGRLQQY*VFAVSPHHVSW
Trigger: CCATGATACATGGTGGGGAGATACAGCAAACACCCAATACTGTTGCAGCCTCCCCTGCTGCATCAGGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CCA 72 bp GGTTGGAGTCAAGTCCCCAAGTGGATAATCACCTCCTaGGGAGGCAGAATCTATAGGAGAGCGAACCATCAC +
Preference number: 3 (lower is better)
Translates to: GWSQVPKWIITS*GGRIYRRANHH
Trigger: GTGATGGTTCGCTCTCCTATAGATTCTGCCTCCCCAGGAGGTGATTATCCACTTGGGGACTTGACTCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
3UTR CCA 72 bp CTCATTGACCCCAGAGGTAGCCTCTTCCATAGTGGTTaGAGTCAAGTCCCCAAGTGGATAATCACCTCCTGG +
Preference number: 3 (lower is better)
Translates to: LIDPRGSLFHSG*SQVPKWIITSW
Trigger: CCAGGAGGTGATTATCCACTTGGGGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTCAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
3UTR CCA 72 bp TCTTCATATCTGCTTCAATGGCACAGCGGCGTCCCCTaGTTCCTCCATCCTGTCCAACTGTTGGTCCCTATA +
Preference number: 3 (lower is better)
Translates to: SSYLLQWHSGVP*FLHPVQLLVPI
Trigger: TATAGGGACCAACAGTTGGACAGGATGGAGGAACCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472478.6
3UTR CCA 72 bp GGACACAGACTCTACAGGGGGTGGCACAAGTTTAACTaGAGGCTCACTGGCAACAGTAGTGAAGGAAGCAAG +
Preference number: 3 (lower is better)
Translates to: GHRLYRGWHKFN*RLTGNSSEGSK
Trigger: CTTGCTTCCTTCACTACTGTTGCCAGTGAGCCTCCAGTTAAACTTGTGCCACCCCCTGTAGAGTCTGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CCA 72 bp GACAATGGTAGCTTGGGACACAGACTCTACAGGGGGTaGCACAAGTTTAACTGGAGGCTCACTGGCAACAGT +
Preference number: 3 (lower is better)
Translates to: DNGSLGHRLYRG*HKFNWRLTGNS
Trigger: ACTGTTGCCAGTGAGCCTCCAGTTAAACTTGTGCCACCCCCTGTAGAGTCTGTGTCCCAAGCTACCATTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR CAA 90 bp CTGGGAAGCACAATGTTTTTGAGAGAACCAGTCTGGAGGGCGGCCAGGTTCTGCGGTTCTGCAAAGGGCTaGATTGCTCTGCTAACTGAT +
Preference number: 3 (lower is better)
Translates to: LGSTMFLREPVWRAARFCGSAKG*IALLTD
Trigger: ATCAGTTAGCAGAGCAATCAAGCCCTTTGCAGAACC...GCAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000450756.5
3UTR TCA 72 bp TGTGGCTGGAACAACTCCAGCTACTATTTCGGCTCCTaGAATGACTGGCTCTGGTTCTGCAGGTTCCACCTT +
Preference number: 3 (lower is better)
Translates to: CGWNNSSYYFGS*NDWLWFCRFHL
Trigger: AAGGTGGAACCTGCAGAACCAGAGCCAGTCATTTCAGGAGCCGAAATAGTAGCTGGAGTTGTTCCAGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CCA 72 bp TCTCAGCCAGATCTAATTCTTCCTTCCCATCTATGCTaGGAGCCTTTGATCCAACAGGAGCCTCTGCTACCC +
Preference number: 3 (lower is better)
Translates to: SQPDLILPSHLC*EPLIQQEPLLP
Trigger: GGGTAGCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAGAATTAGATCTGGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR CAA 90 bp CATTTCACTCTCATTGACCCCAGAGGTAGCCTCTTCCATAGTGGTTGGAGTCAAGGGTGTTTTTACTGCTaGACGAGCCTGGTATGCAGC +
Preference number: 3 (lower is better)
Translates to: HFTLIDPRGSLFHSGWSQGCFYC*TSLVCS
Trigger: GCTGCATACCAGGCTCGTCAAGCAGTAAAAACACCC...TTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTCAATGAGAGTGAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
3UTR-3UTR CAA 90 bp GCCAGGTGCTATGTCATCTGTAACAGGCTGCAGGAAGACATTGGCATACCTATGCAAGTAGCCTTCTCCTaGATCCTCTTCCTTAGGCTC +
Preference number: 3 (lower is better)
Translates to: ARCYVICNRLQEDIGIPMQVAFS*ILFLRL
Trigger: GAGCCTAAGGAAGAGGATCAAGGAGAAGGCTACTTG...CATAGGTATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCTGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
3UTR-3UTR CAA 90 bp CAGTTTCCACCACTTCTCCCTTTTCACCTCGTTTCCGTTTTGGTGTCTCAGTGGCAAGTAGCCTTCTCCTaGATCCTCTTCCTTAGGCTC +
Preference number: 3 (lower is better)
Translates to: QFPPLLPFHLVSVLVSQWQVAFS*ILFLRL
Trigger: GAGCCTAAGGAAGAGGATCAAGGAGAAGGCTACTTG...CCACTGAGACACCAAAACGGAAACGAGGTGAAAAGGGAGAAGTGGTGGAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR CAA 90 bp TGGCCAAGAATTGCTGGATCTGTTCCAAGACATCTCGCTGCATCTCCACTGCCAAACAGTATTGGGTGTTaGCTGTATCTCCCCACCATG +
Preference number: 3 (lower is better)
Translates to: WPRIAGSVPRHLAASPLPNSIGC*LYLPTM
Trigger: CATGGTGGGGAGATACAGCAAACACCCAATACTGTT...TGGCAGTGGAGATGCAGCGAGATGTCTTGGAACAGATCCAGCAATTCTTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR TCA 72 bp TGTTTTCCGTTTCCTCAAAGTCCAGTCTCTCTTGCTTaGCCGTCATTTCTGGTGCAGGGAGAGGTACTGGCT +
Preference number: 3 (lower is better)
Translates to: CFPFPQSPVSLA*PSFLVQGEVLA
Trigger: AGCCAGTACCTCTCCCTGCACCAGAAATGACGGTCAAGCAAGAGAGACTGGACTTTGAGGAAACGGAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR GCA 72 bp ATCCATAGGCCTCTGCACAATGCTGTGGTAGCCAGGTaGTATGTCATCTGTAACAGGCTGCAGGAAGACATT +
Preference number: 3 (lower is better)
Translates to: IHRPLHNAVVAR*YVICNRLQEDI
Trigger: AATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCTGGCTACCACAGCATTGTGCAGAGGCCTATGGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
3UTR GCA 72 bp CCCTTGTTTTCCGTTTCCTCAAAGTCCAGTCTCTCTTaGTTGACCGTCATTTCTGGTGCAGGGAGAGGTACT +
Preference number: 3 (lower is better)
Translates to: PLFSVSSKSSLS*LTVISGAGRGT
Trigger: AGTACCTCTCCCTGCACCAGAAATGACGGTCAAGCAAGAGAGACTGGACTTTGAGGAAACGGAAAACAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CCA 72 bp CAACTCTCTAAGAGAGATTTTCCAGCTCATGTCGTGTaGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTC +
Preference number: 3 (lower is better)
Translates to: QLSKRDFPAHVV*PRYLLFCNFHL
Trigger: GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAAATCTCTCTTAGAGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR-3UTR CAA 90 bp TCATTGACCCCAGAGGTAGCCTCTTCCATAGTGGTTGGAGTCAAGTCCCCAAGTTTCGTTGCAATGTCATaGCAAAGCTCATCCAGTCTG +
Preference number: 3 (lower is better)
Translates to: SLTPEVASSIVVGVKSPSFVAMS*QSSSSL
Trigger: CAGACTGGATGAGCTTTGCAATGACATTGCAACGAA...ACTTGGGGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
3UTR-3UTR CAA 90 bp TGTATCATGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGCCAATTTCTTTTTCGTaGCAATGTCATTGCAAAGCT +
Preference number: 3 (lower is better)
Translates to: CIMGRTPPTSRRTPVLFRPISFS*QCHCKA
Trigger: AGCTTTGCAATGACATTGCAACGAAAAAGAAATTGG...CCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
3UTR-3UTR CAA 90 bp TTTTTCATCTTCATATCTGCTTCAATGGCACAGCGGCGTCCCCTGGTTCCTCCACCCAGCTCCTTCCTCTaGTGCAATATTTTGCTGTCT +
Preference number: 3 (lower is better)
Translates to: FFIFISASMAQRRPLVPPPSSFL*CNILLS
Trigger: AGACAGCAAAATATTGCACAAGAGGAAGGAGCTGGG...TGGAGGAACCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472478.6
3UTR GCA 72 bp TCTTCTCAGCCAGATCTAATTCTTCCTTCCCATCTATaGTGGGAGCCTTTGATCCAACAGGAGCCTCTGCTA +
Preference number: 3 (lower is better)
Translates to: SSQPDLILPSHL*WEPLIQQEPLL
Trigger: TAGCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAGAATTAGATCTGGCTGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR CAA 90 bp CGTTTTGGTGTCTCAGTGGTCTCTAAAAGCTCCGAGTACTGGGAAGCACAATGTGGTTCTGCAAAGGGCTaGATTGCTCTGCTAACTGAT +
Preference number: 3 (lower is better)
Translates to: RFGVSVVSKSSEYWEAQCGSAKG*IALLTD
Trigger: ATCAGTTAGCAGAGCAATCAAGCCCTTTGCAGAACC...ACATTGTGCTTCCCAGTACTCGGAGCTTTTAGAGACCACTGAGACACCAAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000450756.5
3UTR-3UTR CAA 90 bp GATCTTCAATGGGATTTGAGCCATGTGATGGAGACAACATGCTTTCAGGGGATGTCCAGTCTCTCTTGCTaGACCGTCATTTCTGGTGCA +
Preference number: 3 (lower is better)
Translates to: DLQWDLSHVMETTCFQGMSSLSC*TVISGA
Trigger: TGCACCAGAAATGACGGTCAAGCAAGAGAGACTGGA...CATCCCCTGAAAGCATGTTGTCTCCATCACATGGCTCAAATCCCATTGAAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR CAA 90 bp GACCCCAGAGGTAGCCTCTTCCATAGTGGTTGGAGTCAAGTCCCCAAGTGGATACCAATTTCTTTTTCGTaGCAATGTCATTGCAAAGCT +
Preference number: 3 (lower is better)
Translates to: DPRGSLFHSGWSQVPKWIPISFS*QCHCKA
Trigger: AGCTTTGCAATGACATTGCAACGAAAAAGAAATTGG...TATCCACTTGGGGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
3UTR GCA 72 bp CGAAGACTTTTAGCACTGATCCCAGACTCGGATGTTTaGATAATCAACTGCGTGGCCAAGAATTGCTGGATC +
Preference number: 3 (lower is better)
Translates to: RRLLALIPDSDV*IINCVAKNCWI
Trigger: GATCCAGCAATTCTTGGCCACGCAGTTGATTATGCAAACATCCGAGTCTGGGATCAGTGCTAAAAGTCTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR-3UTR CAA 90 bp CAGCTTGAATTAGTTCTGCATCTCTCTTTAGCCGTCTATATCTCTCCTGGGTTTCACCTCGTTTCCGTTTaGGTGTCTCAGTGGTCTCTA +
Preference number: 3 (lower is better)
Translates to: QLELVLHLSLAVYISPGFHLVSV*VSQWSL
Trigger: TAGAGACCACTGAGACACCAAAACGGAAACGAGGTG...AAACCCAGGAGAGATATAGACGGCTAAAGAGAGATGCAGAACTAATTCAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000450756.5
3UTR TCA 72 bp ATCACTCTCGCTCACAGGAGGTTCATTATCCATTTCTaGCAAGTAGCCTTCTCCTTGATCCTCTTCCTTAGG +
Preference number: 3 (lower is better)
Translates to: ITLAHRRFIIHF*QVAFSLILFLR
Trigger: CCTAAGGAAGAGGATCAAGGAGAAGGCTACTTGTCAGAAATGGATAATGAACCTCCTGTGAGCGAGAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
3UTR-3UTR CAA 90 bp CCTTTATCACTTTCTTTAGTTCTTCAACTCGCTCAGCAGTCAATTTCCGAACAAGGAAGCACAATGTTTTaGAGAGAACCAGTCTGGAGG +
Preference number: 3 (lower is better)
Translates to: PLSLSLVLQLAQQSISEQGSTMF*REPVWR
Trigger: CCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTCC...TTGTTCGGAAATTGACTGCTGAGCGAGTTGAAGAACTAAAGAAAGTGATAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000450756.5
CDS-3UTR GCA 90 bp CATGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGTGGCCTCCTGCTGGATAGGATaGTCCCAGGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HGKDPAYLQEDTCTVQVASCWIG*SQGPGR
Trigger: CCTGCCTGGCCCCTGGGAGCATCCTATCCAGCAGGA...GGCCACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGTCCTGCTGGATAGGATaGTCCCAGGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKSCWIG*SQGPGR
Trigger: CCTGCCTGGCCCCTGGGAGCATCCTATCCAGCAGGA...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCTGCAGGGAGAGGTACTaGCTTGTCCCGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASCRERY*LVPLLL
Trigger: CAGCAGGAGCGGGACAAGCCAGTACCTCTCCCTGCA...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCTTCCACCTCTGGAACTaGGCCCGCAAGCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASFHLWN*ARKPKL
Trigger: GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAA...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR TCA 90 bp TGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGTGGCCAGCTGCACTGGGCTCCCTaGTGTCCACCAGTTCATGTA +
Preference number: 4 (lower is better)
Translates to: WEGPRLPPGGHLYCSGGQLHWAP*CPPVHV
Trigger: TACATGAACTGGTGGACATCAGGGAGCCCAGTGCAG...CTGGCCACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCTGCAGGTTCCACCTTaGTCTCTGCACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWALQVPP*SLHWAP
Trigger: GGGAGCCCAGTGCAGAGATCAAGGTGGAACCTGCAG...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGTCCTGCTGGATAGGATaGTCCCAGGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKSCWIG*SQGPGR
Trigger: CCTGCCTGGCCCCTGGGAGCATCCTATCCAGCAGGA...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCGGCTTGTCCCGCTCCTaGTGGATAGGATGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWAGLSRS*WIGCSQ
Trigger: CTGGGAGCATCCTATCCAGCAGGAGCGGGACAAGCC...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCTCTCGGATGGACCATaGCTCTGTGGGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWALSDGP*LCGASA
Trigger: AGCACTGGCCCCACAGAGCCATGGTCCATCCGAGAG...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCCCACCATGTATCATaGGAAGGACCCCGCCTACCT +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASPHHVS*EGPRLP
Trigger: AGGTAGGCGGGGTCCTTCCCATGATACATGGTGGGG...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCAGGGCTGCTGGGGATaGAGTCTGCCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKQGCWG*SLPVCV
Trigger: CACACACACTGGCAGACTCCATCCCCAGCAGCCCTG...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCAGGGCTGCTGGGGATaGAGTCTGCCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWAQGCWG*SLPVCV
Trigger: CACACACACTGGCAGACTCCATCCCCAGCAGCCCTG...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCATTCCACCTCTGGAACTaGGCCCGCAAGCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPFHLWN*ARKPKL
Trigger: GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAA...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGTTCCACCTCTGGAACTaGGCCCGCAAGCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKFHLWN*ARKPKL
Trigger: GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAA...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp TGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCATTCCACCTCTGGAACTaGGCCCGCAAGCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: CGPGTSSSVTSTSGTGPAFHLWN*ARKPKL
Trigger: GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAA...TGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCATTCCCGTCGCCATCTTaGCCCCGAAGTCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPFPSPS*PRSLQP
Trigger: GGGTTGGAGACTTCGGGGCCAAGATGGCGACGGGAA...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411594.6
CDS-3UTR CCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCACACAGCGGCGTCCCCTaGTTCCTCCATCCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPHSGVP*FLHPVQ
Trigger: TTGGACAGGATGGAGGAACCAGGGGACGCCGCTGTG...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472478.6
3UTR CAA 72 bp TTGACCGTCATTTCTGGTGCAGGGAGAGGTACTGGCTaGTCCCGCTCCTGCTGGATAGGATGCTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LTVISGAGRGTG*SRSCWIGCSQG
Trigger: CCCCTGGGAGCATCCTATCCAGCAGGAGCGGGACAAGCCAGTACCTCTCCCTGCACCAGAAATGACGGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTCTGCAGGTTCCACCTTaGTCTCTGCACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSLQVPP*SLHWAP
Trigger: GGGAGCCCAGTGCAGAGATCAAGGTGGAACCTGCAG...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGTGGCCAGTTTCGGCTCCTGAAATaGCTGGCTCTGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: WEGPRLPPGGHLYCSGGQFRLLK*LALVLQ
Trigger: CTGCAGAACCAGAGCCAGTCATTTCAGGAGCCGAAA...CTGGCCACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCACAGACAGAGAACTGTaGAGAAGCAGGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASTDREL*RSRAAG
Trigger: CCCAGCAGCCCTGCTTCTTCACAGTTCTCTGTCTGT...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCTCCCAGGAAACGAGGTaGCTGGGGTACTCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWASQETR*LGYSAK
Trigger: CTTTGCCGAGTACCCCAGTCACCTCGTTTCCTGGGA...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230901.9
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR GCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCTGCTGCTTCCACTGCTaGCACATCCAGCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASCCFHC*HIQHFR
Trigger: CCTGAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCA...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCAGTGCTGCTTCCACTaGTGCCACATCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASQCCFH*CHIQHF
Trigger: GAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCACTG...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGTCCTGCTGGATAGGATaGTCCCAGGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWSCWIG*SQGPGR
Trigger: CCTGCCTGGCCCCTGGGAGCATCCTATCCAGCAGGA...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCGGCTTGTCCCGCTCCTaGTGGATAGGATGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLGLSRS*WIGCSQ
Trigger: CTGGGAGCATCCTATCCAGCAGGAGCGGGACAAGCC...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCCCACAGCCTCCATaGGAACACAGTTGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKPPQPP*EHSCRV
Trigger: AACCCGACAACTGTGTTCCCATGGAGGCTGTGGGGG...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCCCCCACAGCCTCCATaGGAACACAGTTGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWAPPQPP*EHSCRV
Trigger: AACCCGACAACTGTGTTCCCATGGAGGCTGTGGGGG...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGTTGTCCCGCTCCTGCTaGATAGGATGCTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKLSRSC*IGCSQG
Trigger: CCCCTGGGAGCATCCTATCCAGCAGGAGCGGGACAA...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGTTGTCCCGCTCCTGCTaGATAGGATGCTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWLSRSC*IGCSQG
Trigger: CCCCTGGGAGCATCCTATCCAGCAGGAGCGGGACAA...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGTGCAGGGAGAGGTACTaGCTTGTCCCGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWCRERY*LVPLLL
Trigger: CAGCAGGAGCGGGACAAGCCAGTACCTCTCCCTGCA...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCCAGGGCTGCTGGGGATaGAGTCTGCCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLQGCWG*SLPVCV
Trigger: CACACACACTGGCAGACTCCATCCCCAGCAGCCCTG...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTCAGGGCTGCTGGGGATaGAGTCTGCCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSQGCWG*SLPVCV
Trigger: CACACACACTGGCAGACTCCATCCCCAGCAGCCCTG...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCCACAGCGGCGTCCCCTaGTTCCTCCATCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLHSGVP*FLHPSL
Trigger: CAGAGAAGGATGGAGGAACCAGGGGACGCCGCTGTG...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR CCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGCACAGCGGCGTCCCCTaGTTCCTCCATCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWHSGVP*FLHPSL
Trigger: CAGAGAAGGATGGAGGAACCAGGGGACGCCGCTGTG...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR TCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTAAGAGTGGGAGCACCTaGTGCAGCAGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSKSGST*CSRGGC
Trigger: GCAGCCTCCCCTGCTGCATCAGGTGCTCCCACTCTT...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGTATGCTGGGAGCCTTTaGTCCAACAGGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKYAGSL*SNRSLC
Trigger: GCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATA...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGACACAGTTGTCGGGTTaGCTCACTGATGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKTQLSG*LTDAAG
Trigger: CCCTGCTGCATCAGTGAGTCAACCCGACAACTGTGT...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
CDS-3UTR TCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCTCCTCCATCCTTCTCTaGAGCATCCTGTTTGCGGGT +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASSSILL*SILFAG
Trigger: ACCCGCAAACAGGATGCTTCAGAGAAGGATGGAGGA...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR TCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCGAAGTCTCCAACCCTaGGGAGAGACGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKRSLQP*GETVWK
Trigger: CTTCCAGACCGTCTCTCCTCAGGGTTGGAGACTTCG...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411594.6
CDS-3UTR GCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAGCTCTGTGGGGCCAGTaGTTAGCAGCTTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPALWGQ*LAACVC
Trigger: GCAAACACAAGCTGCTAAGCACTGGCCCCACAGAGC...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCCGGAGCAGAGGATGGTaGTGGCAGCGCAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSIRSRGW*WQRRHH
Trigger: ATGATGCCTGCGCTGCCAGCACCATCCTCTGCTCCG...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGTGGACCATGGCTCTGTaGGGCCAGTGCTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKWTMAL*GQCLAA
Trigger: AGCTGCTAAGCACTGGCCCCACAGAGCCATGGTCCA...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGTTGAGAGAACCAGTCTaGAGGGCGGCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWLREPV*RAARFC
Trigger: GCAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAA...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR CCA 90 bp GTATCATGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGTTTGAGAGAACCAGTCTaGAGGGCGGCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VSWEGPRLPPGGHLYCSGLREPV*RAARFC
Trigger: GCAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAA...ACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428808.5
CDS-3UTR CCA 90 bp CCTGGGGAGGCAGAATCTATAGGAGAGCGAACCATCACAGTGGGTAACCTCCGGTTGAGAGAACCAGTCTaGAGGGCGGCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PGEAESIGERTITVGNLRLREPV*RAARFC
Trigger: GCAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAA...CCGGAGGTTACCCACTGTGATGGTTCGCTCTCCTATAGATTCTGCCTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000432618.5
CDS-3UTR CCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTCCCCACCATGTATCATaGGAAGGACCCCGCCTACCT +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSPHHVS*EGPRLP
Trigger: AGGTAGGCGGGGTCCTTCCCATGATACATGGTGGGG...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGTGGCCAGAGACTCTACAGGGGGTaGCACAAGTTTAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: WEGPRLPPGGHLYCSGGQRLYRG*HKFNWR
Trigger: CCTCCAGTTAAACTTGTGCCACCCCCTGTAGAGTCT...CTGGCCACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATTGCAGGGAGAGGTACTaGCTTGTCCCGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLFCNFHLWNWARKPKLYCRERY*LVPLLL
Trigger: CAGCAGGAGCGGGACAAGCCAGTACCTCTCCCTGCA...ATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCACTCCTGAGTTCTGGTaGCTCCATACTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASTPEFW*LHTCGW
Trigger: CCAGCCACAAGTATGGAGCCACCAGAACTCAGGAGT...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCTGACTCCTGAGTTCTaGTGGCTCCATACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASLTPEF*WLHTCG
Trigger: GCCACAAGTATGGAGCCACCAGAACTCAGGAGTCAG...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGCAGGGCTGCTGGGGATaGAGTCTGCCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWQGCWG*SLPVCV
Trigger: CACACACACTGGCAGACTCCATCCCCAGCAGCCCTG...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGGAAACGAGGTGACTaGGGTACTCGGCAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPRKRGD*GTRQSP
Trigger: GGGACTTTGCCGAGTACCCCAGTCACCTCGTTTCCT...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230901.9
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR CCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGTTCCACCTCTGGAACTaGGCCCGCAAGCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWFHLWN*ARKPKL
Trigger: GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAA...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp CCTCCTGGGGAGGCAGAATCTATAGGAGAGCGAACCATCACAGTGGGTAACCTCTTCCCGTCGCCATCTTaGCCCCGAAGTCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: PPGEAESIGERTITVGNLFPSPS*PRSLQP
Trigger: GGGTTGGAGACTTCGGGGCCAAGATGGCGACGGGAA...GAGGTTACCCACTGTGATGGTTCGCTCTCCTATAGATTCTGCCTCCCCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432618.5
CDS-3UTR TCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAAGAGTGGGAGCACCTaGTGCAGCAGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFREKSGST*CSRGGC
Trigger: GCAGCCTCCCCTGCTGCATCAGGTGCTCCCACTCTT...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGTATGCTGGGAGCCTTTaGTCCAACAGGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKYAGSL*SNRSLC
Trigger: GCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATA...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTGCACTGGGCTCCCTaGTGTCCACCAGTTCATGTA +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKLHWAP*CPPVHV
Trigger: TACATGAACTGGTGGACATCAGGGAGCCCAGTGCAG...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGCTGCACTGGGCTCCCTaGTGTCCACCAGTTCATGTA +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWLHWAP*CPPVHV
Trigger: TACATGAACTGGTGGACATCAGGGAGCCCAGTGCAG...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GACCCCAGAGGTAGCCTCTTCCATAGTGGTTGGAGTCAAGTCCCCAAGTGGATACTGCAGGTTCCACCTTaGTCTCTGCACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: DPRGSLFHSGWSQVPKWILQVPP*SLHWAP
Trigger: GGGAGCCCAGTGCAGAGATCAAGGTGGAACCTGCAG...TATCCACTTGGGGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCACTAAGTCCTGACTCCTaGGTTCTGGTGGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPLSPDS*VLVAPY
Trigger: GTATGGAGCCACCAGAACTCAGGAGTCAGGACTTAG...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCTAAGTCCTGACTCCTaGGTTCTGGTGGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWALSPDS*VLVAPY
Trigger: GTATGGAGCCACCAGAACTCAGGAGTCAGGACTTAG...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCATCCTCATCTAAGTCCTaGCTCCTGAGTTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: CGPGTSSSVTSTSGTGPASSSKS*LLSSGG
Trigger: GCCACCAGAACTCAGGAGTCAGGACTTAGATGAGGA...TGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCGTCTGCCAGTGTGTGTaGCTGCAGTGTAGCATTGTG +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWAVCQCV*LQCSIV
Trigger: CACAATGCTACACTGCAGTCACACACACTGGCAGAC...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGACAGACAGAGAACTGTaGAGAAGCAGGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWTDREL*RSRAAG
Trigger: CCCAGCAGCCCTGCTTCTTCACAGTTCTCTGTCTGT...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTCCCAGGAAACGAGGTaGCTGGGGTACTCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSISQETR*LGYSAK
Trigger: CTTTGCCGAGTACCCCAGTCACCTCGTTTCCTGGGA...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230901.9
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR TCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTACACAGTTGTCGGGTTaGCTCACTGATGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSTQLSG*LTDAAG
Trigger: CCCTGCTGCATCAGTGAGTCAACCCGACAACTGTGT...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
CDS-3UTR TCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCTCCTCCATCCTTCTCTaGAGCATCCTGTTTGCGGGT +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWASSILL*SILFAG
Trigger: ACCCGCAAACAGGATGCTTCAGAGAAGGATGGAGGA...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR GCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGGCTCTGTGGGGCCAGTaGTTAGCAGCTTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWALWGQ*LAACVC
Trigger: GCAAACACAAGCTGCTAAGCACTGGCCCCACAGAGC...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCTGCAGCAGGGGAGGCTaGAACAGTATTGGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWACSRGG*NSIGCL
Trigger: CAAACACCCAATACTGTTGCAGCCTCCCCTGCTGCA...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCACCATGTATCATGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTGCAGCAGGGGAGGCTaGAACAGTATTGGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PPCIMGRTPPTSRRTPVLCSRGG*NSIGCL
Trigger: CAAACACCCAATACTGTTGCAGCCTCCCCTGCTGCA...CAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATACATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTCAGTGCTGCTTCCACTaGTGCCACATCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSQCCFH*CHIQHF
Trigger: GAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCACTG...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCCAGTGCTGCTTCCACTaGTGCCACATCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLQCCFH*CHIQHF
Trigger: GAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCACTG...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTTCCTGCTGGATAGGATaGTCCCAGGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTSCWIG*SQGPGR
Trigger: CCTGCCTGGCCCCTGGGAGCATCCTATCCAGCAGGA...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCGGCTTGTCCCGCTCCTaGTGGATAGGATGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLGLSRS*WIGCSQ
Trigger: CTGGGAGCATCCTATCCAGCAGGAGCGGGACAAGCC...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCATTCCACCTTGATCTCTaGACTGGGCTCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPFHLDL*TGLPDV
Trigger: GACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAA...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCTTCCACCTTGATCTCTaGACTGGGCTCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWAFHLDL*TGLPDV
Trigger: GACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAA...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCGACTGGCTCTGGTTCTaGAGGTTCCACCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWADWLWF*RFHLDL
Trigger: GAGATCAAGGTGGAACCTGCAGAACCAGAGCCAGTC...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATTGGACCATGGCTCTGTaGGGCCAGTGCTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLFCNFHLWNWARKPKLYWTMAL*GQCLAA
Trigger: AGCTGCTAAGCACTGGCCCCACAGAGCCATGGTCCA...ATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTCTCTCGGATGGACCATaGCTCTGTGGGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLLSDGP*LCGASA
Trigger: AGCACTGGCCCCACAGAGCCATGGTCCATCCGAGAG...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGATAGCTTCTCTCGGATaGACCATGGCTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWIASLG*TMALWG
Trigger: GCCCCACAGAGCCATGGTCCATCCGAGAGAAGCTAT...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCATAGCTTCTCTCGGATaGACCATGGCTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLIASLG*TMALWG
Trigger: GCCCCACAGAGCCATGGTCCATCCGAGAGAAGCTAT...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CATGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGTGGCCTGGATAATCACCTCCTaGGGAGGCAGAATCTATAGG +
Preference number: 4 (lower is better)
Translates to: HGKDPAYLQEDTCTVQVAWIITS*GGRIYR
Trigger: CCTATAGATTCTGCCTCCCCAGGAGGTGATTATCCA...GGCCACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCCCCCACCATGTATCATaGGAAGGACCCCGCCTACCT +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSIPHHVS*EGPRLP
Trigger: AGGTAGGCGGGGTCCTTCCCATGATACATGGTGGGG...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGTGGCCAGAGGCTGCAACAGTATTaGGTGTTTGCTGTATCTCCC +
Preference number: 4 (lower is better)
Translates to: WEGPRLPPGGHLYCSGGQRLQQY*VFAVSP
Trigger: GGGAGATACAGCAAACACCCAATACTGTTGCAGCCT...CTGGCCACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTAAAGCCGGGAAAGAGTaGGAGCACCTGATGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSKAGKE*EHLMQQ
Trigger: CTGCTGCATCAGGTGCTCCCACTCTTTCCCGGCTTT...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCAACAGTCACAGTATGTaGATCCCCCACAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASNSHSM*IPHSLH
Trigger: ATGGAGGCTGTGGGGGATCCACATACTGTGACTGTT...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTTTGTCCCGCTCCTGCTaGATAGGATGCTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLLSRSC*IGCSQG
Trigger: CCCCTGGGAGCATCCTATCCAGCAGGAGCGGGACAA...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCTCTGCACAATGCTGTGGTAGCCAGGTGCTATGTCATCTGTAACAGGCTGCAGTTGTCCCGCTCCTGCTaGATAGGATGCTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PLHNAVVARCYVICNRLQLSRSC*IGCSQG
Trigger: CCCCTGGGAGCATCCTATCCAGCAGGAGCGGGACAA...CTGCAGCCTGTTACAGATGACATAGCACCTGGCTACCACAGCATTGTGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCGTGGCTCCATACTTGTaGCTGGAACAACTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASVAPYL*LEQLQL
Trigger: TAGCTGGAGTTGTTCCAGCCACAAGTATGGAGCCAC...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGACTCCTGAGTTCTGGTaGCTCCATACTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKTPEFW*LHTCGW
Trigger: CCAGCCACAAGTATGGAGCCACCAGAACTCAGGAGT...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCTCCTCATCCTCACCTaGGGCATCCTTTATCTGGCT +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWALLILT*GILYLA
Trigger: AGCCAGATAAAGGATGCCCCAGGTGAGGATGAGGAG...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCCAGGGCTGCTGGGGATaGAGTCTGCCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLQGCWG*SLPVCV
Trigger: CACACACACTGGCAGACTCCATCCCCAGCAGCCCTG...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTTCATATCTGCTTCAATaGCACAGCGGCGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSSYLLQ*HSGVPW
Trigger: CCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGA...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTTTCCACCTCTGGAACTaGGCCCGCAAGCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLFHLWN*ARKPKL
Trigger: GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAA...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGCCAGCTCATGTCGTGTaGCCCAGGTACCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWPAHVV*PRYLLF
Trigger: GAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp CATGTATCATGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCACCAGCTCATGTCGTGTaGCCCAGGTACCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HVSWEGPRLPPGGHLYCSPAHVV*PRYLLF
Trigger: GAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG...TGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCGAAGCACAATGTTTTTaGGAGAACCAGTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASEAQCF*ENQSGG
Trigger: CCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTC...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR TCA 90 bp TGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGTGGCCAGTCCATGTGTCCAGCTTaGATTAGTTCTGCATCTCTC +
Preference number: 4 (lower is better)
Translates to: WEGPRLPPGGHLYCSGGQSMCPA*ISSASL
Trigger: GAGAGATGCAGAACTAATTCAAGCTGGACACATGGA...CTGGCCACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGACACAGTTGTCGGGTTaGCTCACTGGAGCTACACTT +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKTQLSG*LTGATL
Trigger: AAGTGTAGCTCCAGTGAGTCAACCCGACAACTGTGT...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGTATGCTGGGAGCCTTTaGTCCAACAGGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWYAGSL*SNRSLC
Trigger: GCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATA...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGCTGCACTGGGCTCCCTaGTGTCCACCAGTTCATGTA +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWLHWAP*CPPVHV
Trigger: TACATGAACTGGTGGACATCAGGGAGCCCAGTGCAG...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCCTGCACTGGGCTCCCTaGTGTCCACCAGTTCATGTA +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSILHWAP*CPPVHV
Trigger: TACATGAACTGGTGGACATCAGGGAGCCCAGTGCAG...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTTTTCGGCTCCTGAAATaGCTGGCTCTGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSFRLLK*LALVLQ
Trigger: CTGCAGAACCAGAGCCAGTCATTTCAGGAGCCGAAA...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCCTAAGTCCTGACTCCTaGGTTCTGGTGGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLLSPDS*VLVAPY
Trigger: GTATGGAGCCACCAGAACTCAGGAGTCAGGACTTAG...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TATCATGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGTGCTAAGTCCTGACTCCTaGGTTCTGGTGGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: YHGKDPAYLQEDTCTVQVLSPDS*VLVAPY
Trigger: GTATGGAGCCACCAGAACTCAGGAGTCAGGACTTAG...CACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGTCCTCATCTAAGTCCTaGCTCCTGAGTTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKSSSKS*LLSSGG
Trigger: GCCACCAGAACTCAGGAGTCAGGACTTAGATGAGGA...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCACAGACAGAGAACTGTaGAGAAGCAGGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSITDREL*RSRAAG
Trigger: CCCAGCAGCCCTGCTTCTTCACAGTTCTCTGTCTGT...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATACAGACAGAGAACTGTaGAGAAGCAGGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLFCNFHLWNWARKPKLYTDREL*RSRAAG
Trigger: CCCAGCAGCCCTGCTTCTTCACAGTTCTCTGTCTGT...ATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTGACACTGTCCTTCTCTaGAGCATCCTGTTTGCGGGT +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSDTVLL*SILFAG
Trigger: ACCCGCAAACAGGATGCTTCAGAGAAGGACAGTGTC...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR TCA 90 bp GTACTGGGAAGCACAATGTTTTTGAGAGAACCAGTCTGGAGGGCGGCCAGGTTCGGTAGGAGGATCCCTTaGGCCCAGGAAGTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: VLGSTMFLREPVWRAARFGRRIP*AQEVKR
Trigger: CCTCTTGACTTCCTGGGCTCAAGGGATCCTCCTACC...GAACCTGGCCGCCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTCCCAGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450756.5
CDS-3UTR GCA 90 bp CTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATGCTCTGTGGGGCCAGTaGTTAGCAGCTTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LLFCNFHLWNWARKPKLYALWGQ*LAACVC
Trigger: GCAAACACAAGCTGCTAAGCACTGGCCCCACAGAGC...ATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGTGCAGCAGGGGAGGCTaGAACAGTATTGGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWCSRGG*NSIGCL
Trigger: CAAACACCCAATACTGTTGCAGCCTCCCCTGCTGCA...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTCGGAGCAGAGGATGGTaGTGGCAGCGCAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFRSRGW*WQRRHH
Trigger: ATGATGCCTGCGCTGCCAGCACCATCCTCTGCTCCG...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCTTCCTTCCCATCTATaGTGGGAGCCTTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASLPSHL*WEPLIQ
Trigger: TTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAG...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGTGCTGCTTCCACTGCTaGCACATCCAGCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWCCFHC*HIQHFR
Trigger: CCTGAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCA...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATTGCTGCTTCCACTGCTaGCACATCCAGCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: LLFCNFHLWNWARKPKLYCCFHC*HIQHFR
Trigger: CCTGAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCA...ATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTTTCCACCTTGATCTCTaGACTGGGCTCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSFHLDL*TGLPDV
Trigger: GACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAA...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCGTGATGGAGACAACATaGTTTCAGGGGATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWAVMETT*FQGMPL
Trigger: CAGAGGCATCCCCTGAAAGCATGTTGTCTCCATCAC...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAGTGATGGAGACAACATaGTTTCAGGGGATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPVMETT*FQGMPL
Trigger: CAGAGGCATCCCCTGAAAGCATGTTGTCTCCATCAC...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCGCTGTGGTAGCCAGGTaGTATGTCATCTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWAAVVAR*YVICNR
Trigger: CCTGTTACAGATGACATAGCACCTGGCTACCACAGC...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCACCAGACTCGGATGTTTaGATAATCAACTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: CGPGTSSSVTSTSGTGPAPDSDV*IINCVA
Trigger: GGCCACGCAGTTGATTATGCAAACATCCGAGTCTGG...TGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCCAGACTCGGATGTTTaGATAATCAACTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWAPDSDV*IINCVA
Trigger: GGCCACGCAGTTGATTATGCAAACATCCGAGTCTGG...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTGCCAGCCAAATGCTTTaGTTGGGGGATCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSASQML*LGDPES
Trigger: TGACTCTGGATCCCCCAAGCAAAGCATTTGGCTGGC...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472478.6
CDS-3UTR CCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTTGGACCATGGCTCTGTaGGGCCAGTGCTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSWTMAL*GQCLAA
Trigger: AGCTGCTAAGCACTGGCCCCACAGAGCCATGGTCCA...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGCTCTCGGATGGACCATaGCTCTGTGGGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFRELSDGP*LCGASA
Trigger: AGCACTGGCCCCACAGAGCCATGGTCCATCCGAGAG...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTTTGAGAGAACCAGTCTaGAGGGCGGCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSLREPV*RAARFC
Trigger: GCAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAA...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR CCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTTGAGAGAACCAGTCTaGAGGGCGGCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLLREPV*RAARFC
Trigger: GCAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAA...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR CCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCTCTTCCATAGTGGTTaGAGTCAAGTCCCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWALFHSG*SQVPKW
Trigger: CCACTTGGGGACTTGACTCCAACCACTATGGAAGAG...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCACTCTTCCATAGTGGTTaGAGTCAAGTCCCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: CGPGTSSSVTSTSGTGPALFHSG*SQVPKW
Trigger: CCACTTGGGGACTTGACTCCAACCACTATGGAAGAG...TGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTCCCCACCATGTATCATaGGAAGGACCCCGCCTACCT +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLPHHVS*EGPRLP
Trigger: AGGTAGGCGGGGTCCTTCCCATGATACATGGTGGGG...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCAGGCTGCAACAGTATTaGGTGTTTGCTGTATCTCCC +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASRLQQY*VFAVSP
Trigger: GGGAGATACAGCAAACACCCAATACTGTTGCAGCCT...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCCCCCCACAGCCTCCATaGGAACACAGTTGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLPPQPP*EHSCRV
Trigger: AACCCGACAACTGTGTTCCCATGGAGGCTGTGGGGG...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTTTGTCCCGCTCCTGCTaGATAGGATGCTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTLSRSC*IGCSQG
Trigger: CCCCTGGGAGCATCCTATCCAGCAGGAGCGGGACAA...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTTGCAGGGAGAGGTACTaGCTTGTCCCGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTCRERY*LVPLLL
Trigger: CAGCAGGAGCGGGACAAGCCAGTACCTCTCCCTGCA...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGCTCCTCATCCTCACCTaGGGCATCCTTTATCTGGCT +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWLLILT*GILYLA
Trigger: AGCCAGATAAAGGATGCCCCAGGTGAGGATGAGGAG...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTCATATCTGCTTCAATaGCACAGCGGCGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSISYLLQ*HSGVPW
Trigger: CCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGA...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp TCATTGACCCCAGAGGTAGCCTCTTCCATAGTGGTTGGAGTCAAGTCCCCAAGTTTCCACCTCTGGAACTaGGCCCGCAAGCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: SLTPEVASSIVVGVKSPSFHLWN*ARKPKL
Trigger: GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAA...ACTTGGGGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGTAACTTCCACCTCTaGAACTGGGCCCGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLCNFHL*NWARKP
Trigger: GGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACA...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTTGTAACTTCCACCTCTaGAACTGGGCCCGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLCNFHL*NWARKP
Trigger: GGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACA...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTCCAGCTCATGTCGTGTaGCCCAGGTACCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSPAHVV*PRYLLF
Trigger: GAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCCCAGCTCATGTCGTGTaGCCCAGGTACCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLPAHVV*PRYLLF
Trigger: GAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR CAA 72 bp TGGTGCTGGCAGCGCAGGCATCATGACAATGGTAGCTaGGGACACAGACTCTACAGGGGGTGGCACAAGTTT +
Preference number: 4 (lower is better)
Translates to: WCWQRRHHDNGS*GHRLYRGWHKF
Trigger: AAACTTGTGCCACCCCCTGTAGAGTCTGTGTCCCAAGCTACCATTGTCATGATGCCTGCGCTGCCAGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CAA 72 bp CCTGAAATGACTGGCTCTGGTTCTGCAGGTTCCACCTaGATCTCTGCACTGGGCTCCCTGATGTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: PEMTGSGSAGST*ISALGSLMSTS
Trigger: ACTGGTGGACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAACCTGCAGAACCAGAGCCAGTCATTTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp TGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGTGGCCAGGATCGCCACTTCTCATaGCAGAAGATGCTAAACATA +
Preference number: 4 (lower is better)
Translates to: WEGPRLPPGGHLYCSGGQDRHFS*QKMLNI
Trigger: TATGTTTAGCATCTTCTGTCATGAGAAGTGGCGATC...CTGGCCACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTTATGCTGGGAGCCTTTaGTCCAACAGGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLYAGSL*SNRSLC
Trigger: GCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATA...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCCAGTCTCTCTTGCTTaGCCGTCATTTCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LLFCNFHLWNWARKPKLYPVSLA*PSFLVQ
Trigger: CTGCACCAGAAATGACGGTCAAGCAAGAGAGACTGG...ATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTCTGCACTGGGCTCCCTaGTGTCCACCAGTTCATGTA +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLLHWAP*CPPVHV
Trigger: TACATGAACTGGTGGACATCAGGGAGCCCAGTGCAG...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CCTCTGCACAATGCTGTGGTAGCCAGGTGCTATGTCATCTGTAACAGGCTGCAGCTGCACTGGGCTCCCTaGTGTCCACCAGTTCATGTA +
Preference number: 4 (lower is better)
Translates to: PLHNAVVARCYVICNRLQLHWAP*CPPVHV
Trigger: TACATGAACTGGTGGACATCAGGGAGCCCAGTGCAG...CTGCAGCCTGTTACAGATGACATAGCACCTGGCTACCACAGCATTGTGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGTACTATTTCGGCTCCTaGAATGACTGGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKYYFGS*NDWLWF
Trigger: GAACCAGAGCCAGTCATTTCAGGAGCCGAAATAGTA...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCCTAAGTCCTGACTCCTaGGTTCTGGTGGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSILSPDS*VLVAPY
Trigger: GTATGGAGCCACCAGAACTCAGGAGTCAGGACTTAG...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCGTCTGCCAGTGTGTGTaGCTGCAGTGTAGCATTGTG +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSIVCQCV*LQCSIV
Trigger: CACAATGCTACACTGCAGTCACACACACTGGCAGAC...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGTCTGCCAGTGTGTGTaGCTGCAGTGTAGCATTGTG +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWVCQCV*LQCSIV
Trigger: CACAATGCTACACTGCAGTCACACACACTGGCAGAC...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCATAATGTCACGCTaGAATTCAGCTGTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPSIMSR*NSAVLR
Trigger: CCGAAGCACAGCTGAATTTCAGCGTGACATTATGCT...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGCAGACTGGAGTCCCATaGGCTGAAGAGGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFREQTGVP*AEEGPA
Trigger: TGCAGGTCCCTCTTCAGCTCATGGGACTCCAGTCTG...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGCTCTGTGGGGCCAGTaGTTAGCAGCTTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLALWGQ*LAACVC
Trigger: GCAAACACAAGCTGCTAAGCACTGGCCCCACAGAGC...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAAAGCTCATCCAGTCTaGTGTCCATGTGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPKAHPV*CPCVQL
Trigger: AAGCTGGACACATGGACAGCAGACTGGATGAGCTTT...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GGGGAGGCAGAATCTATAGGAGAGCGAACCATCACAGTGGGTAACCTCCGGGGGAAAGCTCATCCAGTCTaGTGTCCATGTGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GEAESIGERTITVGNLRGKAHPV*CPCVQL
Trigger: AAGCTGGACACATGGACAGCAGACTGGATGAGCTTT...CCCCCGGAGGTTACCCACTGTGATGGTTCGCTCTCCTATAGATTCTGCCTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000428808.5
ENST00000432618.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCTCGTTGCAATGTCATTaGAAAGCTCATCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASSLQCH*KAHPVC
Trigger: GCAGACTGGATGAGCTTTGCAATGACATTGCAACGA...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTGCAGCAGGGGAGGCTaGAACAGTATTGGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSICSRGG*NSIGCL
Trigger: CAAACACCCAATACTGTTGCAGCCTCCCCTGCTGCA...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCTTCCTTCCCATCTATaGTGGGAGCCTTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKLPSHL*WEPLIQ
Trigger: TTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAG...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCTTCCTTCCCATCTATaGTGGGAGCCTTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWALPSHL*WEPLIQ
Trigger: TTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAG...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCCAGTGCTGCTTCCACTaGTGCCACATCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLQCCFH*CHIQHF
Trigger: GAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCACTG...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCGGCTTGTCCCGCTCCTaGTGGATAGGATGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TWQRSTRILSRSEFRERFGLSRS*WIGCSQ
Trigger: CTGGGAGCATCCTATCCAGCAGGAGCGGGACAAGCC...GAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp CTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATTTCCACCTTGATCTCTaGACTGGGCTCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: LLFCNFHLWNWARKPKLYFHLDL*TGLPDV
Trigger: GACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAA...ATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGACTGGCTCTGGTTCTaGAGGTTCCACCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWDWLWF*RFHLDL
Trigger: GAGATCAAGGTGGAACCTGCAGAACCAGAGCCAGTC...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCAACAATCTCTCCAGCTaGAGTACTTCCCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWANNLSS*STSQFL
Trigger: GAGGAACTGGGAAGTACTGCAGCTGGAGAGATTGTT...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTATCTCCCCACCATGTATCATGGGAAGGACCCCGCCTACCTCCAGGAGGACACAACAATCTCTCCAGCTaGAGTACTTCCCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: VSPHHVSWEGPRLPPGGHNNLSS*STSQFL
Trigger: GAGGAACTGGGAAGTACTGCAGCTGGAGAGATTGTT...GTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATACATGGTGGGGAGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAGCCAGTGTGTGTGACTaGAGTGTAGCATTGTGTATG +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPASVCD*SVALCM
Trigger: CATACACAATGCTACACTGCAGTCACACACACTGGC...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCGCTGTGGTAGCCAGGTaGTATGTCATCTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLAVVAR*YVICNR
Trigger: CCTGTTACAGATGACATAGCACCTGGCTACCACAGC...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCTCGCTGCATCTCCACTaGCATGTGATAGACATCATG +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWASLHLH*HVIDIM
Trigger: CATGATGTCTATCACATGGCAGTGGAGATGCAGCGA...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGTGCGTGGCCAAGAATTaGTGGATCTGTTCCAAGACA +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKCVAKN*WICSKT
Trigger: TGTCTTGGAACAGATCCAGCAATTCTTGGCCACGCA...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTCCAGACTCGGATGTTTaGATAATCAACTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSPDSDV*IINCVA
Trigger: GGCCACGCAGTTGATTATGCAAACATCCGAGTCTGG...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTACTGGGAAGCACAATGTTTTTGAGAGAACCAGTCTGGAGGGCGGCCAGGTTCAGGAAGTCAAGAGGCTaGAGTGAGCCCAAATCGCGC +
Preference number: 4 (lower is better)
Translates to: VLGSTMFLREPVWRAARFRKSRG*SEPKSR
Trigger: GCGCGATTTGGGCTCACTGCAGCCTCTTGACTTCCT...GAACCTGGCCGCCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTCCCAGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450756.5
CDS-3UTR CCA 90 bp TACTGCTTGACGAGCCTGGTATGCAGCATCTGTAGCCTTCCTCTTTACTTCAGCCTCTCGGATGGACCATaGCTCTGTGGGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: YCLTSLVCSICSLPLYFSLSDGP*LCGASA
Trigger: AGCACTGGCCCCACAGAGCCATGGTCCATCCGAGAG...GCTGAAGTAAAGAGGAAGGCTACAGATGCTGCATACCAGGCTCGTCAAGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428808.5
ENST00000432618.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCGTTTTGGTGTCTCAGTaGTCTCTAAAAGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASVLVSQ*SLKAPS
Trigger: ACTCGGAGCTTTTAGAGACCACTGAGACACCAAAAC...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCTGGATAATCACCTCCTaGGGAGGCAGAATCTATAGG +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWAWIITS*GGRIYR
Trigger: CCTATAGATTCTGCCTCCCCAGGAGGTGATTATCCA...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCATGGATAATCACCTCCTaGGGAGGCAGAATCTATAGG +
Preference number: 4 (lower is better)
Translates to: CGPGTSSSVTSTSGTGPAWIITS*GGRIYR
Trigger: CCTATAGATTCTGCCTCCCCAGGAGGTGATTATCCA...TGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCCTCTTCCATAGTGGTTaGAGTCAAGTCCCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLLFHSG*SQVPKW
Trigger: CCACTTGGGGACTTGACTCCAACCACTATGGAAGAG...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCAGGCTGCAACAGTATTaGGTGTTTGCTGTATCTCCC +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWARLQQY*VFAVSP
Trigger: GGGAGATACAGCAAACACCCAATACTGTTGCAGCCT...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGAGGCTGCAACAGTATTaGGTGTTTGCTGTATCTCCC +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKRLQQY*VFAVSP
Trigger: GGGAGATACAGCAAACACCCAATACTGTTGCAGCCT...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCATGGCACAAGTTTAACTaGAGGCTCACTGGCAACAGT +
Preference number: 4 (lower is better)
Translates to: CGPGTSSSVTSTSGTGPAWHKFN*RLTGNS
Trigger: ACTGTTGCCAGTGAGCCTCCAGTTAAACTTGTGCCA...TGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTAGACTCTACAGGGGGTaGCACAAGTTTAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSRLYRG*HKFNWR
Trigger: CCTCCAGTTAAACTTGTGCCACCCCCTGTAGAGTCT...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGATGACAATGGTAGCTTaGGACACAGACTCTACAGGG +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKMTMVA*DTDSTG
Trigger: CCCTGTAGAGTCTGTGTCCCAAGCTACCATTGTCAT...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTCCCCCACAGCCTCCATaGGAACACAGTTGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTPPQPP*EHSCRV
Trigger: AACCCGACAACTGTGTTCCCATGGAGGCTGTGGGGG...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGAACAGTCACAGTATGTaGATCCCCCACAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKNSHSM*IPHSLH
Trigger: ATGGAGGCTGTGGGGGATCCACATACTGTGACTGTT...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ATCCATAGGCCTCTGCACAATGCTGTGGTAGCCAGGTGCTATGTCATCTGTAACTGCAGGGAGAGGTACTaGCTTGTCCCGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: IHRPLHNAVVARCYVICNCRERY*LVPLLL
Trigger: CAGCAGGAGCGGGACAAGCCAGTACCTCTCCCTGCA...GTTACAGATGACATAGCACCTGGCTACCACAGCATTGTGCAGAGGCCTATGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCTCCATACTTGTGGCTaGAACAACTCCAGCTACTAT +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASLHTCG*NNSSYY
Trigger: ATAGTAGCTGGAGTTGTTCCAGCCACAAGTATGGAG...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTGTGGCTCCATACTTGTaGCTGGAACAACTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSVAPYL*LEQLQL
Trigger: TAGCTGGAGTTGTTCCAGCCACAAGTATGGAGCCAC...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCGTGGCTCCATACTTGTaGCTGGAACAACTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLVAPYL*LEQLQL
Trigger: TAGCTGGAGTTGTTCCAGCCACAAGTATGGAGCCAC...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGGTGGCTCCATACTTGTaGCTGGAACAACTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWVAPYL*LEQLQL
Trigger: TAGCTGGAGTTGTTCCAGCCACAAGTATGGAGCCAC...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGACTCCTGAGTTCTGGTaGCTCCATACTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWTPEFW*LHTCGW
Trigger: CCAGCCACAAGTATGGAGCCACCAGAACTCAGGAGT...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGCTGACTCCTGAGTTCTaGTGGCTCCATACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWLTPEF*WLHTCG
Trigger: GCCACAAGTATGGAGCCACCAGAACTCAGGAGTCAG...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCCTGACTCCTGAGTTCTaGTGGCTCCATACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSILTPEF*WLHTCG
Trigger: GCCACAAGTATGGAGCCACCAGAACTCAGGAGTCAG...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCATCGCCTTTCCCAATaGCAACATCTGCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASHRLSQ*QHLLQQ
Trigger: TTGTTGAAGCAGATGTTGCCATTGGGAAAGGCGATG...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCTTCACATTTGTAAGTaGAGTCTCATCGCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASLHICK*SLIAFP
Trigger: GGGAAAGGCGATGAGACTCCACTTACAAATGTGAAG...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGCTCCTCATCCTCACCTaGGGCATCCTTTATCTGGCT +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWLLILT*GILYLA
Trigger: AGCCAGATAAAGGATGCCCCAGGTGAGGATGAGGAG...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TGGGACACAGACTCTACAGGGGGTGGCACAAGTTTAACTGGAGGCTCACTGGCACTCCTCATCCTCACCTaGGGCATCCTTTATCTGGCT +
Preference number: 4 (lower is better)
Translates to: WDTDSTGGGTSLTGGSLALLILT*GILYLA
Trigger: AGCCAGATAAAGGATGCCCCAGGTGAGGATGAGGAG...TGCCAGTGAGCCTCCAGTTAAACTTGTGCCACCCCCTGTAGAGTCTGTGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGGGAGGTTCTGGTGGCTaGCTTTCCTTGCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFREGGSGG*LSLPLP
Trigger: AGGAAGCGGCAAGGAAAGCCAGCCACCAGAACCTCC...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTAGGAAACGAGGTGACTaGGGTACTCGGCAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSRKRGD*GTRQSP
Trigger: GGGACTTTGCCGAGTACCCCAGTCACCTCGTTTCCT...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230901.9
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR CCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTCACAGCGGCGTCCCCTaGTTCCTCCATCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFHSGVP*FLHQRE
Trigger: CTCTCTTTGATGGAGGAACCAGGGGACGCCGCTGTG...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTCACAGCGGCGTCCCCTaGTTCCTCCATCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTHSGVP*FLHQRE
Trigger: CTCTCTTTGATGGAGGAACCAGGGGACGCCGCTGTG...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTTCATATCTGCTTCAATaGCACAGCGGCGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLSYLLQ*HSGVPW
Trigger: CCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGA...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR CAA 72 bp GGAGCACCTGATGCAGCAGGGGAGGCTGCAACAGTATaGGGTGTTTGCTGTATCTCCCCACCATGTATCATG +
Preference number: 4 (lower is better)
Translates to: GAPDAAGEAATV*GVCCISPPCIM
Trigger: CATGATACATGGTGGGGAGATACAGCAAACACCCAATACTGTTGCAGCCTCCCCTGCTGCATCAGGTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp GGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCACTGATACCCAATTTTaGTCGCCACTTCTCATGACA +
Preference number: 4 (lower is better)
Translates to: GPGTSSSVTSTSGTGPASTDTQF*SPLLMT
Trigger: TGTCATGAGAAGTGGCGATCAAAATTGGGTATCAGT...GCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR TCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGGAAGCACAATGTTTTTaGGAGAACCAGTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKEAQCF*ENQSGG
Trigger: CCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTC...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR TCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCATCCATGTGTCCAGCTTaGATTAGTTCTGCATCTCTC +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPSMCPA*ISSASL
Trigger: GAGAGATGCAGAACTAATTCAAGCTGGACACATGGA...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTTATGCTGGGAGCCTTTaGTCCAACAGGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTYAGSL*SNRSLC
Trigger: GCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATA...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCCCAGTCTCTCTTGCTTaGCCGTCATTTCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLPVSLA*PSFLVQ
Trigger: CTGCACCAGAAATGACGGTCAAGCAAGAGAGACTGG...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTTTTCGGCTCCTGAAATaGCTGGCTCTGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSFRLLK*LALVLQ
Trigger: CTGCAGAACCAGAGCCAGTCATTTCAGGAGCCGAAA...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTACTATTTCGGCTCCTaGAATGACTGGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLYYFGS*NDWLWF
Trigger: GAACCAGAGCCAGTCATTTCAGGAGCCGAAATAGTA...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TGTATCATGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGTACTATTTCGGCTCCTaGAATGACTGGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: CIMGRTPPTSRRTPVLFRYYFGS*NDWLWF
Trigger: GAACCAGAGCCAGTCATTTCAGGAGCCGAAATAGTA...CCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTCTAAGTCCTGACTCCTaGGTTCTGGTGGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLLSPDS*VLVAPY
Trigger: GTATGGAGCCACCAGAACTCAGGAGTCAGGACTTAG...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTCTAAGTCCTGACTCCTaGGTTCTGGTGGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSLSPDS*VLVAPY
Trigger: GTATGGAGCCACCAGAACTCAGGAGTCAGGACTTAG...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTTCCTCATCTAAGTCCTaGCTCCTGAGTTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSSSSKS*LLSSGG
Trigger: GCCACCAGAACTCAGGAGTCAGGACTTAGATGAGGA...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGTCTGCCAGTGTGTGTaGCTGCAGTGTAGCATTGTG +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSVCQCV*LQCSIV
Trigger: CACAATGCTACACTGCAGTCACACACACTGGCAGAC...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGTTCCTTGCCGCTTCCTaGGATTCCTCACTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFREFLAAS*DSSLPP
Trigger: TGGAGGCAGTGAGGAATCTCAGGAAGCGGCAAGGAA...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGCCTTTGGATTCTTGCTaGGCCTCCCCCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFREPLDSC*ASPSSL
Trigger: GAGTGAAGAGGGGGAGGCTCAGCAAGAATCCAAAGG...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGAAAGCTCATCCAGTCTaGTGTCCATGTGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKKAHPV*CPCVQL
Trigger: AAGCTGGACACATGGACAGCAGACTGGATGAGCTTT...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAAAGCTCATCCAGTCTaGTGTCCATGTGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWKAHPV*CPCVQL
Trigger: AAGCTGGACACATGGACAGCAGACTGGATGAGCTTT...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCAAAGCTCATCCAGTCTaGTGTCCATGTGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLKAHPV*CPCVQL
Trigger: AAGCTGGACACATGGACAGCAGACTGGATGAGCTTT...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTAAAGCTCATCCAGTCTaGTGTCCATGTGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSKAHPV*CPCVQL
Trigger: AAGCTGGACACATGGACAGCAGACTGGATGAGCTTT...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCTCGTTGCAATGTCATTaGAAAGCTCATCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWASLQCH*KAHPVC
Trigger: GCAGACTGGATGAGCTTTGCAATGACATTGCAACGA...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAACAGTATTGGGTGTTTaGTGTATCTCCCCACCATGT +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPTVLGV*CISPPC
Trigger: ACATGGTGGGGAGATACAGCAAACACCCAATACTGT...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAACAGTATTGGGTGTTTaGTGTATCTCCCCACCATGT +
Preference number: 4 (lower is better)
Translates to: CGPGTSSSVTSTSGTGPATVLGV*CISPPC
Trigger: ACATGGTGGGGAGATACAGCAAACACCCAATACTGT...TGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTTCCTTCCCATCTATaGTGGGAGCCTTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKLPSHL*WEPLIQ
Trigger: TTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAG...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTTGCTGCTTCCACTGCTaGCACATCCAGCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTCCFHC*HIQHFR
Trigger: CCTGAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCA...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTCAGTGCTGCTTCCACTaGTGCCACATCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFQCCFH*CHIQHF
Trigger: GAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCACTG...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTTTCCACCTTGATCTCTaGACTGGGCTCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSFHLDL*TGLPDV
Trigger: GACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAA...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGACTGGCTCTGGTTCTaGAGGTTCCACCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLDWLWF*RFHLDL
Trigger: GAGATCAAGGTGGAACCTGCAGAACCAGAGCCAGTC...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCGACTGGCTCTGGTTCTaGAGGTTCCACCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLDWLWF*RFHLDL
Trigger: GAGATCAAGGTGGAACCTGCAGAACCAGAGCCAGTC...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCTCTGCACAATGCTGTGGTAGCCAGGTGCTATGTCATCTGTAACAGGCTGCAGGACTGGCTCTGGTTCTaGAGGTTCCACCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: PLHNAVVARCYVICNRLQDWLWF*RFHLDL
Trigger: GAGATCAAGGTGGAACCTGCAGAACCAGAGCCAGTC...CTGCAGCCTGTTACAGATGACATAGCACCTGGCTACCACAGCATTGTGCAGAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR GCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCCCAATGGCAACATCTaGTTCAACAATCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKPNGNI*FNNLSS
Trigger: GCTGGAGAGATTGTTGAAGCAGATGTTGCCATTGGG...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCCCCAATGGCAACATCTaGTTCAACAATCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLPNGNI*FNNLSS
Trigger: GCTGGAGAGATTGTTGAAGCAGATGTTGCCATTGGG...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGTGATGGAGACAACATaGTTTCAGGGGATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWVMETT*FQGMPL
Trigger: CAGAGGCATCCCCTGAAAGCATGTTGTCTCCATCAC...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATGTGATGGAGACAACATaGTTTCAGGGGATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LLFCNFHLWNWARKPKLYVMETT*FQGMPL
Trigger: CAGAGGCATCCCCTGAAAGCATGTTGTCTCCATCAC...ATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCGCCAGTGTGTGTGACTaGAGTGTAGCATTGTGTATG +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLASVCD*SVALCM
Trigger: CATACACAATGCTACACTGCAGTCACACACACTGGC...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGTGCGTGGCCAAGAATTaGTGGATCTGTTCCAAGACA +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKCVAKN*WICSKT
Trigger: TGTCTTGGAACAGATCCAGCAATTCTTGGCCACGCA...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCGTTTGCATAATCAACTaGGTGGCCAAGAATTGCTGG +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWAVCIIN*VAKNCW
Trigger: CCAGCAATTCTTGGCCACGCAGTTGATTATGCAAAC...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCCCAGACTCGGATGTTTaGATAATCAACTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSIPDSDV*IINCVA
Trigger: GGCCACGCAGTTGATTATGCAAACATCCGAGTCTGG...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCCAGACTCGGATGTTTaGATAATCAACTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLFCNFHLWNWARKPKLYPDSDV*IINCVA
Trigger: GGCCACGCAGTTGATTATGCAAACATCCGAGTCTGG...ATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTATAGCTTCTCTCGGATaGACCATGGCTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFIASLG*TMALWG
Trigger: GCCCCACAGAGCCATGGTCCATCCGAGAGAAGCTAT...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAGTTTTGGTGTCTCAGTaGTCTCTAAAAGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: CGPGTSSSVTSTSGTGPAVLVSQ*SLKAPS
Trigger: ACTCGGAGCTTTTAGAGACCACTGAGACACCAAAAC...TGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GGGGAGGCAGAATCTATAGGAGAGCGAACCATCACAGTGGGTAACCTCCGGGGGGTTTTGGTGTCTCAGTaGTCTCTAAAAGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GEAESIGERTITVGNLRGVLVSQ*SLKAPS
Trigger: ACTCGGAGCTTTTAGAGACCACTGAGACACCAAAAC...CCCCCGGAGGTTACCCACTGTGATGGTTCGCTCTCCTATAGATTCTGCCTCCCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTTGGATAATCACCTCCTaGGGAGGCAGAATCTATAGG +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSWIITS*GGRIYR
Trigger: CCTATAGATTCTGCCTCCCCAGGAGGTGATTATCCA...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAAAGCCGGGAAAGAGTaGGAGCACCTGATGCAGCAG +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFREKAGKE*EHLMQQ
Trigger: CTGCTGCATCAGGTGCTCCCACTCTTTCCCGGCTTT...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTGTCGGGTTGACTCACTaGAGCTACACTTTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSVGLTH*SYTFSS
Trigger: ACTACTGAAAGTGTAGCTCCAGTGAGTCAACCCGAC...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCAACAGTCACAGTATGTaGATCCCCCACAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSINSHSM*IPHSLH
Trigger: ATGGAGGCTGTGGGGGATCCACATACTGTGACTGTT...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCACTCCATACTTGTGGCTaGAACAACTCCAGCTACTAT +
Preference number: 4 (lower is better)
Translates to: CGPGTSSSVTSTSGTGPALHTCG*NNSSYY
Trigger: ATAGTAGCTGGAGTTGTTCCAGCCACAAGTATGGAG...TGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCATCGCCTTTCCCAATaGCAACATCTGCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWAHRLSQ*QHLLQQ
Trigger: TTGTTGAAGCAGATGTTGCCATTGGGAAAGGCGATG...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCACTTCACATTTGTAAGTaGAGTCTCATCGCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: CGPGTSSSVTSTSGTGPALHICK*SLIAFP
Trigger: GGGAAAGGCGATGAGACTCCACTTACAAATGTGAAG...TGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCCTCCTCATCCTCACCTaGGGCATCCTTTATCTGGCT +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLLLILT*GILYLA
Trigger: AGCCAGATAAAGGATGCCCCAGGTGAGGATGAGGAG...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTTCATATCTGCTTCAATaGCACAGCGGCGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTSYLLQ*HSGVPW
Trigger: CCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGA...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR TCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCACTGATACCCAATTTTaGTCGCCACTTCTCATGACA +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWATDTQF*SPLLMT
Trigger: TGTCATGAGAAGTGGCGATCAAAATTGGGTATCAGT...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR TCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGTCCATGTGTCCAGCTTaGATTAGTTCTGCATCTCTC +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWSMCPA*ISSASL
Trigger: GAGAGATGCAGAACTAATTCAAGCTGGACACATGGA...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTACACAGTTGTCGGGTTaGCTCACTGGAGCTACACTT +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSTQLSG*LTGATL
Trigger: AAGTGTAGCTCCAGTGAGTCAACCCGACAACTGTGT...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GTGGTAGCCAGGTGCTATGTCATCTGTAACAGGCTGCAGGAAGACATTGGCATATATGCTGGGAGCCTTTaGTCCAACAGGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VVARCYVICNRLQEDIGIYAGSL*SNRSLC
Trigger: GCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATA...TATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCTGGCTACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTCCAGTCTCTCTTGCTTaGCCGTCATTTCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTPVSLA*PSFLVQ
Trigger: CTGCACCAGAAATGACGGTCAAGCAAGAGAGACTGG...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTCTGCAGGTTCCACCTTaGTCTCTGCACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSLQVPP*SLHWAP
Trigger: GGGAGCCCAGTGCAGAGATCAAGGTGGAACCTGCAG...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTTTTCGGCTCCTGAAATaGCTGGCTCTGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFFRLLK*LALVLQ
Trigger: CTGCAGAACCAGAGCCAGTCATTTCAGGAGCCGAAA...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTTCCTCATCTAAGTCCTaGCTCCTGAGTTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFSSSKS*LLSSGG
Trigger: GCCACCAGAACTCAGGAGTCAGGACTTAGATGAGGA...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAATTTCAAACTTGTGCTaGGTCTCTGCCTCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: CGPGTSSSVTSTSGTGPAISNLC*VSASKG
Trigger: TCCTTTAGAGGCAGAGACTCAGCACAAGTTTGAAAT...TGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CCACCATGTATCATGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGATTTCAAACTTGTGCTaGGTCTCTGCCTCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: PPCIMGRTPPTSRRTPVLISNLC*VSASKG
Trigger: TCCTTTAGAGGCAGAGACTCAGCACAAGTTTGAAAT...CAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATACATGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp TTTCACCTCGTTTCCGTTTTGGTGTCTCAGTGGTCTCTAAAAGCTCCGAGTACTGTCAAGAGGCTGCAGTaGGCCCAAATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: FHLVSVLVSQWSLKAPSTVKRLQ*AQIAPL
Trigger: CAGTGGCGCGATTTGGGCTCACTGCAGCCTCTTGAC...AGTACTCGGAGCTTTTAGAGACCACTGAGACACCAAAACGGAAACGAGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450756.5
CDS-3UTR GCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGTCGTTGCAATGTCATTaGAAAGCTCATCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWSLQCH*KAHPVC
Trigger: GCAGACTGGATGAGCTTTGCAATGACATTGCAACGA...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGACAGTATTGGGTGTTTaGTGTATCTCCCCACCATGT +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWTVLGV*CISPPC
Trigger: ACATGGTGGGGAGATACAGCAAACACCCAATACTGT...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGACAGTATTGGGTGTTTaGTGTATCTCCCCACCATGT +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKTVLGV*CISPPC
Trigger: ACATGGTGGGGAGATACAGCAAACACCCAATACTGT...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GATCTTCAATGGGATTTGAGCCATGTGATGGAGACAACATGCTTTCAGGGGATGCGGAGCAGAGGATGGTaGTGGCAGCGCAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: DLQWDLSHVMETTCFQGMRSRGW*WQRRHH
Trigger: ATGATGCCTGCGCTGCCAGCACCATCCTCTGCTCCG...CATCCCCTGAAAGCATGTTGTCTCCATCACATGGCTCAAATCCCATTGAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp ATCCATAGGCCTCTGCACAATGCTGTGGTAGCCAGGTGCTATGTCATCTGTAACTGCTGCTTCCACTGCTaGCACATCCAGCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: IHRPLHNAVVARCYVICNCCFHC*HIQHFR
Trigger: CCTGAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCA...GTTACAGATGACATAGCACCTGGCTACCACAGCATTGTGCAGAGGCCTATGGAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TTTTCATCTTCATATCTGCTTCAATGGCACAGCGGCGTCCCCTGGTTCCTCCATTGCTGCTTCCACTGCTaGCACATCCAGCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: FSSSYLLQWHSGVPWFLHCCFHC*HIQHFR
Trigger: CCTGAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCA...ATGGAGGAACCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp TTTTCATCTTCATATCTGCTTCAATGGCACAGCGGCGTCCCCTGGTTCCTCCATCAGTGCTGCTTCCACTaGTGCCACATCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: FSSSYLLQWHSGVPWFLHQCCFH*CHIQHF
Trigger: GAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCACTG...ATGGAGGAACCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp ATTGTGTATGCTGAAGCCATCATCACTCTCGCTCACAGGAGGTTCATTATCCATTCCTGCTGGATAGGATaGTCCCAGGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IVYAEAIITLAHRRFIIHSCWIG*SQGPGR
Trigger: CCTGCCTGGCCCCTGGGAGCATCCTATCCAGCAGGA...ATGGATAATGAACCTCCTGTGAGCGAGAGTGATGATGGCTTCAGCATACACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTAAGTCCAGTCTCTCTTaGTTGACCGTCATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSKSSLS*LTVISG
Trigger: ACCAGAAATGACGGTCAAGCAAGAGAGACTGGACTT...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAAGTCCAGTCTCTCTTaGTTGACCGTCATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWKSSLS*LTVISG
Trigger: ACCAGAAATGACGGTCAAGCAAGAGAGACTGGACTT...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTTTCCACCTTGATCTCTaGACTGGGCTCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFFHLDL*TGLPDV
Trigger: GACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAA...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTGACTGGCTCTGGTTCTaGAGGTTCCACCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTDWLWF*RFHLDL
Trigger: GAGATCAAGGTGGAACCTGCAGAACCAGAGCCAGTC...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGTGATGGAGACAACATaGTTTCAGGGGATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSVMETT*FQGMPL
Trigger: CAGAGGCATCCCCTGAAAGCATGTTGTCTCCATCAC...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCAGTGTGTGTGACTaGAGTGTAGCATTGTGTATG +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWASVCD*SVALCM
Trigger: CATACACAATGCTACACTGCAGTCACACACACTGGC...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCGCTGTGGTAGCCAGGTaGTATGTCATCTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLAVVAR*YVICNR
Trigger: CCTGTTACAGATGACATAGCACCTGGCTACCACAGC...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TTCCATAGTGGTTGGAGTCAAGTCCCCAAGTGGATAATCACCTCCTGGGGAGGCGCTGTGGTAGCCAGGTaGTATGTCATCTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: FHSGWSQVPKWIITSWGGAVVAR*YVICNR
Trigger: CCTGTTACAGATGACATAGCACCTGGCTACCACAGC...GCCTCCCCAGGAGGTGATTATCCACTTGGGGACTTGACTCCAACCACTATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAGCTGAAATTCAGCTGTaGTTCGGATCAGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPAEIQL*FGSVHF
Trigger: AAAATGGACTGATCCGAAGCACAGCTGAATTTCAGC...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGGTTTGCATAATCAACTaGGTGGCCAAGAATTGCTGG +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWVCIIN*VAKNCW
Trigger: CCAGCAATTCTTGGCCACGCAGTTGATTATGCAAAC...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGGTTCTCTCTCCGGGCTaGTTTCCTCTAGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFREVLSPG*FPLVPQ
Trigger: CTGAGGAACTAGAGGAAAGCAGCCCGGAGAGAGAAC...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGCCTGAGATTCCTCACTaGCTCCATCCCCAACAAGCA +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFREPEIPH*LHPQQA
Trigger: TGCTTGTTGGGGATGGAGGCAGTGAGGAATCTCAGG...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTTTTCATCTTCATATCTaGTTCAATGGCACAGCGGCG +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSFHLHI*FNGTAA
Trigger: CGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAA...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR GCA 90 bp TGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAATAGCCCATGGTTTCTaGCCTAAAACAGGCAATTGT +
Preference number: 4 (lower is better)
Translates to: CGPGTSSSVTSTSGTGPAIAHGF*PKTGNC
Trigger: ACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTAT...TGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR GCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAATAGCCCATGGTTTCTaGCCTAAAACAGGCAATTGT +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPIAHGF*PKTGNC
Trigger: ACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTAT...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR GCA 90 bp GGGGAGGCAGAATCTATAGGAGAGCGAACCATCACAGTGGGTAACCTCCGGGGGTACTGGGAAGCACAATaGAATTTTGATCGCCACTTC +
Preference number: 4 (lower is better)
Translates to: GEAESIGERTITVGNLRGYWEAQ*NFDRHF
Trigger: GAAGTGGCGATCAAAATTGCATTGTGCTTCCCAGTA...CCCCCGGAGGTTACCCACTGTGATGGTTCGCTCTCCTATAGATTCTGCCTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGTGGACCATGGCTCTGTaGGGCCAGTGCTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRWTMAL*GQCLAA
Trigger: AGCTGCTAAGCACTGGCCCCACAGAGCCATGGTCCA...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCCTCTCGGATGGACCATaGCTCTGTGGGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLLSDGP*LCGASA
Trigger: AGCACTGGCCCCACAGAGCCATGGTCCATCCGAGAG...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTGTTTTGGTGTCTCAGTaGTCTCTAAAAGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSVLVSQ*SLKAPS
Trigger: ACTCGGAGCTTTTAGAGACCACTGAGACACCAAAAC...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTGGATAATCACCTCCTaGGGAGGCAGAATCTATAGG +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSIWIITS*GGRIYR
Trigger: CCTATAGATTCTGCCTCCCCAGGAGGTGATTATCCA...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTCTCTTCCATAGTGGTTaGAGTCAAGTCCCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLLFHSG*SQVPKW
Trigger: CCACTTGGGGACTTGACTCCAACCACTATGGAAGAG...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGCCCCACCATGTATCATaGGAAGGACCCCGCCTACCT +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRPHHVS*EGPRLP
Trigger: AGGTAGGCGGGGTCCTTCCCATGATACATGGTGGGG...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp GCCAGGTGCTATGTCATCTGTAACAGGCTGCAGGAAGACATTGGCATACCTATGAAAGCCGGGAAAGAGTaGGAGCACCTGATGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ARCYVICNRLQEDIGIPMKAGKE*EHLMQQ
Trigger: CTGCTGCATCAGGTGCTCCCACTCTTTCCCGGCTTT...CATAGGTATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCAACAGTCACAGTATGTaGATCCCCCACAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLNSHSM*IPHSLH
Trigger: ATGGAGGCTGTGGGGGATCCACATACTGTGACTGTT...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCTCATTGACCCCAGAGGTAGCCTCTTCCATAGTGGTTGGAGTCAAGTCCCCAAACAGTCACAGTATGTaGATCCCCCACAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: LSLTPEVASSIVVGVKSPNSHSM*IPHSLH
Trigger: ATGGAGGCTGTGGGGGATCCACATACTGTGACTGTT...TGGGGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTCAATGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTCCTTCCCATCTATGCTaGGAGCCTTTGATCCAACAG +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSPSHLC*EPLIQQ
Trigger: CTGTTGGATCAAAGGCTCCCAGCATAGATGGGAAGG...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTTGCAGGGAGAGGTACTaGCTTGTCCCGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSCRERY*LVPLLL
Trigger: CAGCAGGAGCGGGACAAGCCAGTACCTCTCCCTGCA...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGCTCCATACTTGTGGCTaGAACAACTCCAGCTACTAT +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWLHTCG*NNSSYY
Trigger: ATAGTAGCTGGAGTTGTTCCAGCCACAAGTATGGAG...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCCTCCATACTTGTGGCTaGAACAACTCCAGCTACTAT +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLLHTCG*NNSSYY
Trigger: ATAGTAGCTGGAGTTGTTCCAGCCACAAGTATGGAG...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCTGGGGAGGCAGAATCTATAGGAGAGCGAACCATCACAGTGGGTAACCTCCGGCATCGCCTTTCCCAATaGCAACATCTGCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: PGEAESIGERTITVGNLRHRLSQ*QHLLQQ
Trigger: TTGTTGAAGCAGATGTTGCCATTGGGAAAGGCGATG...CCGGAGGTTACCCACTGTGATGGTTCGCTCTCCTATAGATTCTGCCTCCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp TGTATCATGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGGGGGCATCCTTTATCTaGCTTCCAAAAATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: CIMGRTPPTSRRTPVLFRGASFI*LPKIVP
Trigger: AGGGACTATTTTTGGAAGCCAGATAAAGGATGCCCC...CCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATACA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTCAGGGCTGCTGGGGATaGAGTCTGCCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSQGCWG*SLPVCV
Trigger: CACACACACTGGCAGACTCCATCCCCAGCAGCCCTG...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp GTGTATGCTGAAGCCATCATCACTCTCGCTCACAGGAGGTTCATTATCCATTTCCAGGGCTGCTGGGGATaGAGTCTGCCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VYAEAIITLAHRRFIIHFQGCWG*SLPVCV
Trigger: CACACACACTGGCAGACTCCATCCCCAGCAGCCCTG...GAAATGGATAATGAACCTCCTGTGAGCGAGAGTGATGATGGCTTCAGCATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCGTGGCCAAGAATTGCTaGATCTGTTCCAAGACATCT +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLVAKNC*ICSKTS
Trigger: AGATGTCTTGGAACAGATCCAGCAATTCTTGGCCAC...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAGTGGAGGAGGTTCTaGTGGCTGGCTTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: TWQRSTRILSRSEFRERFKWRRF*WLAFLA
Trigger: GGCAAGGAAAGCCAGCCACCAGAACCTCCTCCACTT...GAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp ACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCCCCTTCCTTCTTGTCTaGTACCAGATGGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TWQRSTRILSRSEFRERFPFLLV*YQMEGS
Trigger: GCTGCCCTCCATCTGGTACCAGACAAGAAGGAAGGG...GAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp TACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCACTGATACCCAATTTTaGTCGCCACTTCTCATGACA +
Preference number: 4 (lower is better)
Translates to: YLLFCNFHLWNWARKPKLTDTQF*SPLLMT
Trigger: TGTCATGAGAAGTGGCGATCAAAATTGGGTATCAGT...GAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR TCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGAAGCACAATGTTTTTaGGAGAACCAGTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSEAQCF*ENQSGG
Trigger: CCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTC...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR TCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTAGCCTCTGCTACCCCTaGTCGAAAACACTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLSLCYP*SKTLFF
Trigger: AAAGAAGAGTGTTTTCGATCAGGGGTAGCAGAGGCT...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCAGCCTCTGCTACCCCTaGTCGAAAACACTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLSLCYP*SKTLFF
Trigger: AAAGAAGAGTGTTTTCGATCAGGGGTAGCAGAGGCT...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TTTCCACCACTTCTCCCTTTTCACCTCGTTTCCGTTTTGGTGTCTCAGTGGTCTTATGCTGGGAGCCTTTaGTCCAACAGGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: FPPLLPFHLVSVLVSQWSYAGSL*SNRSLC
Trigger: GCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATA...AGACCACTGAGACACCAAAACGGAAACGAGGTGAAAAGGGAGAAGTGGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTTACTATTTCGGCTCCTaGAATGACTGGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSYYFGS*NDWLWF
Trigger: GAACCAGAGCCAGTCATTTCAGGAGCCGAAATAGTA...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp ACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCCTAAGTCCTGACTCCTaGGTTCTGGTGGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: TWQRSTRILSRSEFRERFLSPDS*VLVAPY
Trigger: GTATGGAGCCACCAGAACTCAGGAGTCAGGACTTAG...GAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp GTGGTAGCCAGGTGCTATGTCATCTGTAACAGGCTGCAGGAAGACATTGGCATACTAAGTCCTGACTCCTaGGTTCTGGTGGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: VVARCYVICNRLQEDIGILSPDS*VLVAPY
Trigger: GTATGGAGCCACCAGAACTCAGGAGTCAGGACTTAG...TATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCTGGCTACCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCTTCATTATCCATTTCTaGCAAGTAGCCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWAFIIHF*QVAFSL
Trigger: CAAGGAGAAGGCTACTTGTCAGAAATGGATAATGAA...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGACAGACAGAGAACTGTaGAGAAGCAGGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRTDREL*RSRAAG
Trigger: CCCAGCAGCCCTGCTTCTTCACAGTTCTCTGTCTGT...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCTCTCCATACAAGCATaGTGGCTTTCTTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKLSIQA*WLSSKF
Trigger: AAATTTGGAAGAAAGCCATCATGCTTGTATGGAGAG...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTAGCATAATGTCACGCTaGAATTCAGCTGTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLSIMSR*NSAVLR
Trigger: CCGAAGCACAGCTGAATTTCAGCGTGACATTATGCT...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAATAGACATCATGGTCTaGGCTATTGTACATTACAGC +
Preference number: 4 (lower is better)
Translates to: CGPGTSSSVTSTSGTGPAIDIMV*AIVHYS
Trigger: GCTGTAATGTACAATAGCTCAGACCATGATGTCTAT...TGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAATAGACATCATGGTCTaGGCTATTGTACATTACAGC +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPIDIMV*AIVHYS
Trigger: GCTGTAATGTACAATAGCTCAGACCATGATGTCTAT...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGTGGAGTCCCATGAGCTaGAGAGGGACCTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRWSPMS*RGTCSH
Trigger: ATGACTGCAGGTCCCTCTTCAGCTCATGGGACTCCA...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTAAAGCTCATCCAGTCTaGTGTCCATGTGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLKAHPV*CPCVQL
Trigger: AAGCTGGACACATGGACAGCAGACTGGATGAGCTTT...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGTCGTTGCAATGTCATTaGAAAGCTCATCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWSLQCH*KAHPVC
Trigger: GCAGACTGGATGAGCTTTGCAATGACATTGCAACGA...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TGGGAAGGACCCCGCCTACCTCCAGGAGGACACCTGTACTGTTCAGGTGGCCAGCAATTTCTTTTTCGTTaGAATGTCATTGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: WEGPRLPPGGHLYCSGGQQFLFR*NVIAKL
Trigger: GAGCTTTGCAATGACATTGCAACGAAAAAGAAATTG...CTGGCCACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCATCATGGATATTTCACTaGTGTCCATGGAAACAGTCA +
Preference number: 4 (lower is better)
Translates to: CGPGTSSSVTSTSGTGPASWIFH*CPWKQS
Trigger: TGACTGTTTCCATGGACAGCAGTGAAATATCCATGA...TGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCATCATGGATATTTCACTaGTGTCCATGGAAACAGTCA +
Preference number: 4 (lower is better)
Translates to: PGTSSSVTSTSGTGPASPSWIFH*CPWKQS
Trigger: TGACTGTTTCCATGGACAGCAGTGAAATATCCATGA...TGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGTCATGGATATTTCACTaGTGTCCATGGAAACAGTCA +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKSWIFH*CPWKQS
Trigger: TGACTGTTTCCATGGACAGCAGTGAAATATCCATGA...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GGGGAGGCAGAATCTATAGGAGAGCGAACCATCACAGTGGGTAACCTCCGGGGGTCATGGATATTTCACTaGTGTCCATGGAAACAGTCA +
Preference number: 4 (lower is better)
Translates to: GEAESIGERTITVGNLRGSWIFH*CPWKQS
Trigger: TGACTGTTTCCATGGACAGCAGTGAAATATCCATGA...CCCCCGGAGGTTACCCACTGTGATGGTTCGCTCTCCTATAGATTCTGCCTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGCAGTGCTGCTTCCACTaGTGCCACATCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRQCCFH*CHIQHF
Trigger: GAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCACTG...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp CATCATCACTCTCGCTCACAGGAGGTTCATTATCCATTTCTGACAAGTAGCCTTGGCTTGTCCCGCTCCTaGTGGATAGGATGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HHHSRSQEVHYPFLTSSLGLSRS*WIGCSQ
Trigger: CTGGGAGCATCCTATCCAGCAGGAGCGGGACAAGCC...AAGGCTACTTGTCAGAAATGGATAATGAACCTCCTGTGAGCGAGAGTGATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCAAGTCCAGTCTCTCTTaGTTGACCGTCATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSIKSSLS*LTVISG
Trigger: ACCAGAAATGACGGTCAAGCAAGAGAGACTGGACTT...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCTTCCACCTTGATCTCTaGACTGGGCTCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: TWQRSTRILSRSEFRERFFHLDL*TGLPDV
Trigger: GACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAA...GAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp TACTGCTTGACGAGCCTGGTATGCAGCATCTGTAGCCTTCCTCTTTACTTCAGCTTCCACCTTGATCTCTaGACTGGGCTCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: YCLTSLVCSICSLPLYFSFHLDL*TGLPDV
Trigger: GACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAA...GCTGAAGTAAAGAGGAAGGCTACAGATGCTGCATACCAGGCTCGTCAAGCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCAACAATCTCTCCAGCTaGAGTACTTCCCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLNNLSS*STSQFL
Trigger: GAGGAACTGGGAAGTACTGCAGCTGGAGAGATTGTT...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TCATTGACCCCAGAGGTAGCCTCTTCCATAGTGGTTGGAGTCAAGTCCCCAAGTGTGATGGAGACAACATaGTTTCAGGGGATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLTPEVASSIVVGVKSPSVMETT*FQGMPL
Trigger: CAGAGGCATCCCCTGAAAGCATGTTGTCTCCATCAC...ACTTGGGGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGCCAGTGTGTGTGACTaGAGTGTAGCATTGTGTATG +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSASVCD*SVALCM
Trigger: CATACACAATGCTACACTGCAGTCACACACACTGGC...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGATACCTATGATTAGCTaGAGCTCTCCATACAAGCAT +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKIPMIS*SSPYKH
Trigger: ATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTAT...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTGCTGAAATTCAGCTGTaGTTCGGATCAGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSAEIQL*FGSVHF
Trigger: AAAATGGACTGATCCGAAGCACAGCTGAATTTCAGC...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTCCAGACTCGGATGTTTaGATAATCAACTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFPDSDV*IINCVA
Trigger: GGCCACGCAGTTGATTATGCAAACATCCGAGTCTGG...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TTTCCACCACTTCTCCCTTTTCACCTCGTTTCCGTTTTGGTGTCTCAGTGGTCTATAGCTTCTCTCGGATaGACCATGGCTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FPPLLPFHLVSVLVSQWSIASLG*TMALWG
Trigger: GCCCCACAGAGCCATGGTCCATCCGAGAGAAGCTAT...AGACCACTGAGACACCAAAACGGAAACGAGGTGAAAAGGGAGAAGTGGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000428808.5
ENST00000450756.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CATTTCACTCTCATTGACCCCAGAGGTAGCCTCTTCCATAGTGGTTGGAGTCAAATAGCTTCTCTCGGATaGACCATGGCTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: HFTLIDPRGSLFHSGWSQIASLG*TMALWG
Trigger: GCCCCACAGAGCCATGGTCCATCCGAGAGAAGCTAT...TTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTCAATGAGAGTGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCGTTTTGGTGTCTCAGTaGTCTCTAAAAGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSIVLVSQ*SLKAPS
Trigger: ACTCGGAGCTTTTAGAGACCACTGAGACACCAAAAC...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTTGGATAATCACCTCCTaGGGAGGCAGAATCTATAGG +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLWIITS*GGRIYR
Trigger: CCTATAGATTCTGCCTCCCCAGGAGGTGATTATCCA...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGCTCTTCCATAGTGGTTaGAGTCAAGTCCCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFRELFHSG*SQVPKW
Trigger: CCACTTGGGGACTTGACTCCAACCACTATGGAAGAG...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGTCGGGTTGACTCACTaGAGCTACACTTTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSVGLTH*SYTFSS
Trigger: ACTACTGAAAGTGTAGCTCCAGTGAGTCAACCCGAC...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGCCTTCCCATCTATGCTaGGAGCCTTTGATCCAACAG +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFREPSHLC*EPLIQQ
Trigger: CTGTTGGATCAAAGGCTCCCAGCATAGATGGGAAGG...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTTGCAGGGAGAGGTACTaGCTTGTCCCGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPACRERY*LVPLLL
Trigger: CAGCAGGAGCGGGACAAGCCAGTACCTCTCCCTGCA...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTCCATACTTGTGGCTaGAACAACTCCAGCTACTAT +
Preference number: 4 (lower is better)
Translates to: LLFCNFHLWNWARKPKLYLHTCG*NNSSYY
Trigger: ATAGTAGCTGGAGTTGTTCCAGCCACAAGTATGGAG...ATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCACTCCTGAGTTCTGGTaGCTCCATACTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TWQRSTRILSRSEFRERFTPEFW*LHTCGW
Trigger: CCAGCCACAAGTATGGAGCCACCAGAACTCAGGAGT...GAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp GCCAGGTGCTATGTCATCTGTAACAGGCTGCAGGAAGACATTGGCATACCTATGCTGACTCCTGAGTTCTaGTGGCTCCATACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: ARCYVICNRLQEDIGIPMLTPEF*WLHTCG
Trigger: GCCACAAGTATGGAGCCACCAGAACTCAGGAGTCAG...CATAGGTATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGCATCGCCTTTCCCAATaGCAACATCTGCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWHRLSQ*QHLLQQ
Trigger: TTGTTGAAGCAGATGTTGCCATTGGGAAAGGCGATG...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCCTTCACATTTGTAAGTaGAGTCTCATCGCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSILHICK*SLIAFP
Trigger: GGGAAAGGCGATGAGACTCCACTTACAAATGTGAAG...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGCTTCACATTTGTAAGTaGAGTCTCATCGCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWLHICK*SLIAFP
Trigger: GGGAAAGGCGATGAGACTCCACTTACAAATGTGAAG...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCTAAAGGATCTTCAATaGGATTTGAGCCATGTGATG +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWALKDLQ*DLSHVM
Trigger: CATCACATGGCTCAAATCCCATTGAAGATCCTTTAG...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGGGGCATCCTTTATCTaGCTTCCAAAAATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWGASFI*LPKIVP
Trigger: AGGGACTATTTTTGGAAGCCAGATAAAGGATGCCCC...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATGGGGCATCCTTTATCTaGCTTCCAAAAATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LLFCNFHLWNWARKPKLYGASFI*LPKIVP
Trigger: AGGGACTATTTTTGGAAGCCAGATAAAGGATGCCCC...ATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATGTGGCCAAGAATTGCTaGATCTGTTCCAAGACATCT +
Preference number: 4 (lower is better)
Translates to: LLFCNFHLWNWARKPKLYVAKNC*ICSKTS
Trigger: AGATGTCTTGGAACAGATCCAGCAATTCTTGGCCAC...ATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTAGAAAACCTGGTCCTCCCCTTTaGATTCTTGCTGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: VPGSSLGQSSGRDSNSRKPGPPL*ILAEPP
Trigger: GGGAGGCTCAGCAAGAATCCAAAGGGGAGGACCAGG...TTTTCTAGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGAGGTCTCGCAGGAATTaGGCCATGGTGCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRRSRRN*AMVRIR
Trigger: TCGGATTCGCACCATGGCCCAATTCCTGCGAGACCT...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp GTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCCAAGCATCTTTTTCTaGGGTGAATCATCTGTTACT +
Preference number: 4 (lower is better)
Translates to: VVWPRYLLFCNFHLWNWAPSIFF*GESSVT
Trigger: AGTAACAGATGATTCACCCCAGAAAAAGATGCTTGG...GGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230901.9
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR CCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTGTAACTTCCACCTCTaGAACTGGGCCCGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLCNFHL*NWARKP
Trigger: GGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACA...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCCCAGCTCATGTCGTGTaGCCCAGGTACCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLPAHVV*PRYLLF
Trigger: GAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR TCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTGAAGCACAATGTTTTTaGGAGAACCAGTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTEAQCF*ENQSGG
Trigger: CCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTC...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR TCA 90 bp CTTCCAATTTCTTTTTCGTTGCAATGTCATTGCAAAGCTCATCCAGTCTGCTGTAAGAGTGGGAGCACCTaGTGCAGCAGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LPISFSLQCHCKAHPVCCKSGST*CSRGGC
Trigger: GCAGCCTCCCCTGCTGCATCAGGTGCTCCCACTCTT...ACAGCAGACTGGATGAGCTTTGCAATGACATTGCAACGAAAAAGAAATTGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTAGCCTCTGCTACCCCTaGTCGAAAACACTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTSLCYP*SKTLFF
Trigger: AAAGAAGAGTGTTTTCGATCAGGGGTAGCAGAGGCT...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCACTGCAGGTTCCACCTTaGTCTCTGCACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SALKQAIVLLQLSKRDFPLQVPP*SLHWAP
Trigger: GGGAGCCCAGTGCAGAGATCAAGGTGGAACCTGCAG...TGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATCTGCAGGTTCCACCTTaGTCTCTGCACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDLQVPP*SLHWAP
Trigger: GGGAGCCCAGTGCAGAGATCAAGGTGGAACCTGCAG...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp ATTGGCATACCTATGATTAGCTGCAGCTCTCCATACAAGCATGATGGCTTTCTTCTGCAGGTTCCACCTTaGTCTCTGCACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: IGIPMISCSSPYKHDGFLLQVPP*SLHWAP
Trigger: GGGAGCCCAGTGCAGAGATCAAGGTGGAACCTGCAG...AAGAAAGCCATCATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCATTTCAAACTTGTGCTaGGTCTCTGCCTCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSIISNLC*VSASKG
Trigger: TCCTTTAGAGGCAGAGACTCAGCACAAGTTTGAAAT...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTTTCATTATCCATTTCTaGCAAGTAGCCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSFIIHF*QVAFSL
Trigger: CAAGGAGAAGGCTACTTGTCAGAAATGGATAATGAA...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp ACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTCTCTCCATACAAGCATaGTGGCTTTCTTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: TSSSVTSTSGTGPASPSSLSIQA*WLSSKF
Trigger: AAATTTGGAAGAAAGCCATCATGCTTGTATGGAGAG...AGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTACATTGGCATACCTATaGTTAGCTGCAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSTLAYL*LAAALH
Trigger: ATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGT...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTACATTGGCATACCTATaGTTAGCTGCAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLTLAYL*LAAALH
Trigger: ATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGT...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GACCCCAGAGGTAGCCTCTTCCATAGTGGTTGGAGTCAAGTCCCCAAGTGGATAACATTGGCATACCTATaGTTAGCTGCAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: DPRGSLFHSGWSQVPKWITLAYL*LAAALH
Trigger: ATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGT...TATCCACTTGGGGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTAGCATAATGTCACGCTaGAATTCAGCTGTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFSIMSR*NSAVLR
Trigger: CCGAAGCACAGCTGAATTTCAGCGTGACATTATGCT...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGACACTGTCCTTCTCTaGAGCATCCTGTTTGCGGGT +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRDTVLL*SILFAG
Trigger: ACCCGCAAACAGGATGCTTCAGAGAAGGACAGTGTC...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGGACTGCTGAACCTGTaGCTGGCAATCATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRGLLNL*LAIIFQ
Trigger: CTGGAAGATGATTGCCAGTCACAGGTTCAGCAGTCC...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTTGGGGCCTGCCTTTCTaGCACAGGCTTCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSWGLPF*HRLQKW
Trigger: CCATTTCTGAAGCCTGTGTCAGAAAGGCAGGCCCCA...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp AGTACTGGGAAGCACAATGTTTTTGAGAGAACCAGTCTGGAGGGCGGCCAGGTTCACTCCAGCCAATTTTaGTCGCCACTTCTCATGACA +
Preference number: 4 (lower is better)
Translates to: STGKHNVFERTSLEGGQVHSSQF*SPLLMT
Trigger: TGTCATGAGAAGTGGCGATCAAAATTGGCTGGAGTG...AACCTGGCCGCCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTCCCAGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450756.5
CDS-3UTR GCA 90 bp GTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTAGAAAAGCTCTGTGGGGCCAGTaGTTAGCAGCTTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: VPGSSLGQSSGRDSNSRKALWGQ*LAACVC
Trigger: GCAAACACAAGCTGCTAAGCACTGGCCCCACAGAGC...TTTTCTAGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp GTACTGGGAAGCACAATGTTTTTGAGAGAACCAGTCTGGAGGGCGGCCAGGTTCTCGTTGCAATGTCATTaGAAAGCTCATCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: VLGSTMFLREPVWRAARFSLQCH*KAHPVC
Trigger: GCAGACTGGATGAGCTTTGCAATGACATTGCAACGA...GAACCTGGCCGCCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTCCCAGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000450756.5
CDS-3UTR GCA 90 bp AGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGTCATGGATATTTCACTaGTGTCCATGGAAACAGTCA +
Preference number: 4 (lower is better)
Translates to: RYLLFCNFHLWNWARKPKSWIFH*CPWKQS
Trigger: TGACTGTTTCCATGGACAGCAGTGAAATATCCATGA...CTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTCTTCCTTCCCATCTATaGTGGGAGCCTTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTLPSHL*WEPLIQ
Trigger: TTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAG...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GCCATTTCACTCTCATTGACCCCAGAGGTAGCCTCTTCCATAGTGGTTGGAGTCCTTCCTTCCCATCTATaGTGGGAGCCTTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: AISLSLTPEVASSIVVGVLPSHL*WEPLIQ
Trigger: TTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAG...GACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTCAATGAGAGTGAAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTTGCTGCTTCCACTGCTaGCACATCCAGCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSCCFHC*HIQHFR
Trigger: CCTGAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCA...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTGCTGCTTCCACTGCTaGCACATCCAGCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLCCFHC*HIQHFR
Trigger: CCTGAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCA...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GAAGACATTGGCATACCTATGATTAGCTGCAGCTCTCCATACAAGCATGATGGCCAGTGCTGCTTCCACTaGTGCCACATCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: EDIGIPMISCSSPYKHDGQCCFH*CHIQHF
Trigger: GAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCACTG...GCCATCATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGTCTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TCTGCCAGTGTGTGTGACTGCAGTGTAGCATTGTGTATGCTGAAGCCATCATCATTCCACCTTGATCTCTaGACTGGGCTCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: SASVCDCSVALCMLKPSSFHLDL*TGLPDV
Trigger: GACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAA...TGATGATGGCTTCAGCATACACAATGCTACACTGCAGTCACACACACTGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GCCAGGTGCTATGTCATCTGTAACAGGCTGCAGGAAGACATTGGCATACCTATGGTGATGGAGACAACATaGTTTCAGGGGATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ARCYVICNRLQEDIGIPMVMETT*FQGMPL
Trigger: CAGAGGCATCCCCTGAAAGCATGTTGTCTCCATCAC...CATAGGTATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCTGAAATTCAGCTGTaGTTCGGATCAGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWAEIQL*FGSVHF
Trigger: AAAATGGACTGATCCGAAGCACAGCTGAATTTCAGC...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGTCGCTGCATCTCCACTaGCATGTGATAGACATCATG +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFRESLHLH*HVIDIM
Trigger: CATGATGTCTATCACATGGCAGTGGAGATGCAGCGA...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTTCGCTGCATCTCCACTaGCATGTGATAGACATCATG +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTSLHLH*HVIDIM
Trigger: CATGATGTCTATCACATGGCAGTGGAGATGCAGCGA...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGTGCGTGGCCAAGAATTaGTGGATCTGTTCCAAGACA +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFRECVAKN*WICSKT
Trigger: TGTCTTGGAACAGATCCAGCAATTCTTGGCCACGCA...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTTGCGTGGCCAAGAATTaGTGGATCTGTTCCAAGACA +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFCVAKN*WICSKT
Trigger: TGTCTTGGAACAGATCCAGCAATTCTTGGCCACGCA...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGTTTGCATAATCAACTaGGTGGCCAAGAATTGCTGG +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSVCIIN*VAKNCW
Trigger: CCAGCAATTCTTGGCCACGCAGTTGATTATGCAAAC...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCCCAGACTCGGATGTTTaGATAATCAACTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: TWQRSTRILSRSEFRERFPDSDV*IINCVA
Trigger: GGCCACGCAGTTGATTATGCAAACATCCGAGTCTGG...GAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTGTGGCTGGCTTTCCTTaGCGCTTCCTGAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSVAGFP*RFLRFL
Trigger: GAGGAATCTCAGGAAGCGGCAAGGAAAGCCAGCCAC...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTTTTCATCTTCATATCTaGTTCAATGGCACAGCGGCG +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSFHLHI*FNGTAA
Trigger: CGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAA...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTATAGCTTCTCTCGGATaGACCATGGCTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSIASLG*TMALWG
Trigger: GCCCCACAGAGCCATGGTCCATCCGAGAGAAGCTAT...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCGTTTTGGTGTCTCAGTaGTCTCTAAAAGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLVLVSQ*SLKAPS
Trigger: ACTCGGAGCTTTTAGAGACCACTGAGACACCAAAAC...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTCCCCACCATGTATCATaGGAAGGACCCCGCCTACCT +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPAPHHVS*EGPRLP
Trigger: AGGTAGGCGGGGTCCTTCCCATGATACATGGTGGGG...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GACATTGGCATACCTATGATTAGCTGCAGCTCTCCATACAAGCATGATGGCTTTCCCCACCATGTATCATaGGAAGGACCCCGCCTACCT +
Preference number: 4 (lower is better)
Translates to: DIGIPMISCSSPYKHDGFPHHVS*EGPRLP
Trigger: AGGTAGGCGGGGTCCTTCCCATGATACATGGTGGGG...AAAGCCATCATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTAGGCTGCAACAGTATTaGGTGTTTGCTGTATCTCCC +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTRLQQY*VFAVSP
Trigger: GGGAGATACAGCAAACACCCAATACTGTTGCAGCCT...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGATGACAATGGTAGCTTaGGACACAGACTCTACAGGG +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFREMTMVA*DTDSTG
Trigger: CCCTGTAGAGTCTGTGTCCCAAGCTACCATTGTCAT...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTGTCGGGTTGACTCACTaGAGCTACACTTTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTVGLTH*SYTFSS
Trigger: ACTACTGAAAGTGTAGCTCCAGTGAGTCAACCCGAC...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTGTCGGGTTGACTCACTaGAGCTACACTTTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFVGLTH*SYTFSS
Trigger: ACTACTGAAAGTGTAGCTCCAGTGAGTCAACCCGAC...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTGTCCCGCTCCTGCTaGATAGGATGCTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDLSRSC*IGCSQG
Trigger: CCCCTGGGAGCATCCTATCCAGCAGGAGCGGGACAA...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ATTGGCATACCTATGATTAGCTGCAGCTCTCCATACAAGCATGATGGCTTTCTTTGCAGGGAGAGGTACTaGCTTGTCCCGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: IGIPMISCSSPYKHDGFLCRERY*LVPLLL
Trigger: CAGCAGGAGCGGGACAAGCCAGTACCTCTCCCTGCA...AAGAAAGCCATCATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTCATCGCCTTTCCCAATaGCAACATCTGCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLHRLSQ*QHLLQQ
Trigger: TTGTTGAAGCAGATGTTGCCATTGGGAAAGGCGATG...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGCTAAAGGATCTTCAATaGGATTTGAGCCATGTGATG +
Preference number: 4 (lower is better)
Translates to: PAHVVWPRYLLFCNFHLWLKDLQ*DLSHVM
Trigger: CATCACATGGCTCAAATCCCATTGAAGATCCTTTAG...CCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCGGGGCATCCTTTATCTaGCTTCCAAAAATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLGASFI*LPKIVP
Trigger: AGGGACTATTTTTGGAAGCCAGATAAAGGATGCCCC...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGCTCCTCATCCTCACCTaGGGCATCCTTTATCTGGCT +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRLLILT*GILYLA
Trigger: AGCCAGATAAAGGATGCCCCAGGTGAGGATGAGGAG...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGTGGCCAAGAATTGCTaGATCTGTTCCAAGACATCT +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSVAKNC*ICSKTS
Trigger: AGATGTCTTGGAACAGATCCAGCAATTCTTGGCCAC...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGTTGTCTGGTACCAGATaGAGGGCAGCAGCCTTCACT +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRLSGTR*RAAAFT
Trigger: AGTGAAGGCTGCTGCCCTCCATCTGGTACCAGACAA...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCAGGAAACGAGGTGACTaGGGTACTCGGCAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLRKRGD*GTRQSP
Trigger: GGGACTTTGCCGAGTACCCCAGTCACCTCGTTTCCT...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230901.9
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR CCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTTGTAACTTCCACCTCTaGAACTGGGCCCGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPACNFHL*NWARKP
Trigger: GGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACA...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp CAGCTTGAATTAGTTCTGCATCTCTCTTTAGCCGTCTATATCTCTCCTGGGTTTATAGTGTACCGGCGTTaGTTCGCGGTGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QLELVLHLSLAVYISPGFIVYRR*FAVPPG
Trigger: CCCAGGAGGCACCGCGAACCAACGCCGGTACACTAT...AAACCCAGGAGAGATATAGACGGCTAAAGAGAGATGCAGAACTAATTCAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432618.5
CDS-3UTR CCA 90 bp GCCAGGTGCTATGTCATCTGTAACAGGCTGCAGGAAGACATTGGCATACCTATGCTCCTCATCCTCACCTaGGGCATCTTAAGACTAAGC +
Preference number: 4 (lower is better)
Translates to: ARCYVICNRLQEDIGIPMLLILT*GILRLS
Trigger: GCTTAGTCTTAAGATGCCCCAGGTGAGGATGAGGAG...CATAGGTATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506167.5
3UTR CAA 72 bp ATGGAGTCTGCCAGTGTGTGTGACTGCAGTGTAGCATaGTGTATGCTGAAGCCATCATCACTCTCGCTCACA +
Preference number: 4 (lower is better)
Translates to: MESASVCDCSVA*CMLKPSSLSLT
Trigger: TGTGAGCGAGAGTGATGATGGCTTCAGCATACACAATGCTACACTGCAGTCACACACACTGGCAGACTCCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
3UTR CAA 72 bp CTGGGCTCCCTGATGTCCACCAGTTCATGTATTCCCTaGTTTTCCGTTTCCTCAAAGTCCAGTCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LGSLMSTSSCIP*FSVSSKSSLSC
Trigger: GCAAGAGAGACTGGACTTTGAGGAAACGGAAAACAAGGGAATACATGAACTGGTGGACATCAGGGAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
3UTR CAA 72 bp CCCATTGGGACACTGTCCTTCTCTGAAGCATCCTGTTaGCGGGTAGAATCTCTCCCTCGAAGACTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: PIGTLSFSEASC*RVESLPRRLLA
Trigger: TGCTAAAAGTCTTCGAGGGAGAGATTCTACCCGCAAACAGGATGCTTCAGAGAAGGACAGTGTCCCAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCACTGATACCCAATTTTaGTCGCCACTTCTCATGACA +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLTDTQF*SPLLMT
Trigger: TGTCATGAGAAGTGGCGATCAAAATTGGGTATCAGT...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR TCA 90 bp GTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACACATAAGAGTGGGAGCACCTaGTGCAGCAGGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VCTIDKTIQTSYDLLATHKSGST*CSRGGC
Trigger: GCAGCCTCCCCTGCTGCATCAGGTGCTCCCACTCTT...ATGTGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCCCAGTCTCTCTTGCTTaGCCGTCATTTCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLPVSLA*PSFLVQ
Trigger: CTGCACCAGAAATGACGGTCAAGCAAGAGAGACTGG...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTTTTCGGCTCCTGAAATaGCTGGCTCTGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSFRLLK*LALVLQ
Trigger: CTGCAGAACCAGAGCCAGTCATTTCAGGAGCCGAAA...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTCCTCATCTAAGTCCTaGCTCCTGAGTTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLSSSKS*LLSSGG
Trigger: GCCACCAGAACTCAGGAGTCAGGACTTAGATGAGGA...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTTCCTCATCTAAGTCCTaGCTCCTGAGTTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSSSSKS*LLSSGG
Trigger: GCCACCAGAACTCAGGAGTCAGGACTTAGATGAGGA...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGTTCATTATCCATTTCTaGCAAGTAGCCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWFIIHF*QVAFSL
Trigger: CAAGGAGAAGGCTACTTGTCAGAAATGGATAATGAA...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTAGAAAAGTCTGCCAGTGTGTGTaGCTGCAGTGTAGCATTGTG +
Preference number: 4 (lower is better)
Translates to: VPGSSLGQSSGRDSNSRKVCQCV*LQCSIV
Trigger: CACAATGCTACACTGCAGTCACACACACTGGCAGAC...TTTTCTAGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCGTCTGCCAGTGTGTGTaGCTGCAGTGTAGCATTGTG +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLVCQCV*LQCSIV
Trigger: CACAATGCTACACTGCAGTCACACACACTGGCAGAC...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GTGTATGCTGAAGCCATCATCACTCTCGCTCACAGGAGGTTCATTATCCATTTCGTCTGCCAGTGTGTGTaGCTGCAGTGTAGCATTGTG +
Preference number: 4 (lower is better)
Translates to: VYAEAIITLAHRRFIIHFVCQCV*LQCSIV
Trigger: CACAATGCTACACTGCAGTCACACACACTGGCAGAC...GAAATGGATAATGAACCTCCTGTGAGCGAGAGTGATGATGGCTTCAGCATACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GACATTGGCATACCTATGATTAGCTGCAGCTCTCCATACAAGCATGATGGCTTTACAGACAGAGAACTGTaGAGAAGCAGGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: DIGIPMISCSSPYKHDGFTDREL*RSRAAG
Trigger: CCCAGCAGCCCTGCTTCTTCACAGTTCTCTGTCTGT...AAAGCCATCATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTACATTGGCATACCTATaGTTAGCTGCAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTTLAYL*LAAALH
Trigger: ATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGT...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GCCAGGTGCTATGTCATCTGTAACAGGCTGCAGGAAGACATTGGCATACCTATGAGCATAATGTCACGCTaGAATTCAGCTGTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: ARCYVICNRLQEDIGIPMSIMSR*NSAVLR
Trigger: CCGAAGCACAGCTGAATTTCAGCGTGACATTATGCT...CATAGGTATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCTGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCATAGACATCATGGTCTaGGCTATTGTACATTACAGC +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSIIDIMV*AIVHYS
Trigger: GCTGTAATGTACAATAGCTCAGACCATGATGTCTAT...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCGACACTGTCCTTCTCTaGAGCATCCTGTTTGCGGGT +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLDTVLL*SILFAG
Trigger: ACCCGCAAACAGGATGCTTCAGAGAAGGACAGTGTC...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR TCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGGGGTCTCCTTTAGCTaGAAGCTCTTCAGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRGVSFS*KLFSLS
Trigger: AGAGAGACTGAAGAGCTTTCAGCTAAAGGAGACCCC...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp ACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCCTGGTCTTCCATCTCTaGCACATATACTTCACCCTG +
Preference number: 4 (lower is better)
Translates to: TWQRSTRILSRSEFRERFLVFHL*HIYFTL
Trigger: CAGGGTGAAGTATATGTGTCAGAGATGGAAGACCAG...GAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGCAGATATTCAGTACCTaGATCTGCTCCAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFREQIFST*ICSRTS
Trigger: AGAAGTCCTGGAGCAGATTCAGGTACTGAATATCTG...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTCCCAGGAAACGAGGTaGCTGGGGTACTCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDSQETR*LGYSAK
Trigger: CTTTGCCGAGTACCCCAGTCACCTCGTTTCCTGGGA...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230901.9
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR GCA 90 bp ACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAAGCTCATCCAGTCTaGTGTCCATGTGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TWQRSTRILSRSEFRERFKAHPV*CPCVQL
Trigger: AAGCTGGACACATGGACAGCAGACTGGATGAGCTTT...GAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTTCGTTGCAATGTCATTaGAAAGCTCATCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFSLQCH*KAHPVC
Trigger: GCAGACTGGATGAGCTTTGCAATGACATTGCAACGA...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCAATTTCTTTTTCGTTaGAATGTCATTGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: WPRYLLFCNFHLWNWARKQFLFR*NVIAKL
Trigger: GAGCTTTGCAATGACATTGCAACGAAAAAGAAATTG...CTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGACAGTATTGGGTGTTTaGTGTATCTCCCCACCATGT +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFRETVLGV*CISPPC
Trigger: ACATGGTGGGGAGATACAGCAAACACCCAATACTGT...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTTGCAGCAGGGGAGGCTaGAACAGTATTGGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSCSRGG*NSIGCL
Trigger: CAAACACCCAATACTGTTGCAGCCTCCCCTGCTGCA...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp CCCAAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTTCCTGCTGGATAGGATaGTCCCAGGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PKLYLVYFYFRFGSKRVTSCWIG*SQGPGR
Trigger: CCTGCCTGGCCCCTGGGAGCATCCTATCCAGCAGGA...AGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTAAGTCCAGTCTCTCTTaGTTGACCGTCATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTKSSLS*LTVISG
Trigger: ACCAGAAATGACGGTCAAGCAAGAGAGACTGGACTT...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTGACTGGCTCTGGTTCTaGAGGTTCCACCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSDWLWF*RFHLDL
Trigger: GAGATCAAGGTGGAACCTGCAGAACCAGAGCCAGTC...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp ACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCCCCAATGGCAACATCTaGTTCAACAATCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TWQRSTRILSRSEFRERFPNGNI*FNNLSS
Trigger: GCTGGAGAGATTGTTGAAGCAGATGTTGCCATTGGG...GAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp ACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCGCCAGTGTGTGTGACTaGAGTGTAGCATTGTGTATG +
Preference number: 4 (lower is better)
Translates to: TWQRSTRILSRSEFRERFASVCD*SVALCM
Trigger: CATACACAATGCTACACTGCAGTCACACACACTGGC...GAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp TCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCATACCTATGATTAGCTaGAGCTCTCCATACAAGCAT +
Preference number: 4 (lower is better)
Translates to: SSSVTSTSGTGPASPSSIIPMIS*SSPYKH
Trigger: ATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTAT...GATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATATACCTATGATTAGCTaGAGCTCTCCATACAAGCAT +
Preference number: 4 (lower is better)
Translates to: LLFCNFHLWNWARKPKLYIPMIS*SSPYKH
Trigger: ATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTAT...ATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TTTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCGCTGAAATTCAGCTGTaGTTCGGATCAGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: FPAHVVWPRYLLFCNFHLAEIQL*FGSVHF
Trigger: AAAATGGACTGATCCGAAGCACAGCTGAATTTCAGC...GAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTTTCCACCACTTCTCCCTTTTCACCTCGTTTCCGTTTTGGTGTCTCAGTGGTCTCGCTGCATCTCCACTaGCATGTGATAGACATCATG +
Preference number: 4 (lower is better)
Translates to: VSTTSPFSPRFRFGVSVVSLHLH*HVIDIM
Trigger: CATGATGTCTATCACATGGCAGTGGAGATGCAGCGA...GACCACTGAGACACCAAAACGGAAACGAGGTGAAAAGGGAGAAGTGGTGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp GTTTCCACCACTTCTCCCTTTTCACCTCGTTTCCGTTTTGGTGTCTCAGTGGTCTGCGTGGCCAAGAATTaGTGGATCTGTTCCAAGACA +
Preference number: 4 (lower is better)
Translates to: VSTTSPFSPRFRFGVSVVCVAKN*WICSKT
Trigger: TGTCTTGGAACAGATCCAGCAATTCTTGGCCACGCA...GACCACTGAGACACCAAAACGGAAACGAGGTGAAAAGGGAGAAGTGGTGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTGTTTGCATAATCAACTaGGTGGCCAAGAATTGCTGG +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFVCIIN*VAKNCW
Trigger: CCAGCAATTCTTGGCCACGCAGTTGATTATGCAAAC...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp AACTGTGTAGGACCAGCTTCTAAAAGCCGGGAAAGAGTGGGAGCACCTGATGCAGTTTGCATAATCAACTaGGTGGCCAAGAATTGCTGG +
Preference number: 4 (lower is better)
Translates to: NCVGPASKSRERVGAPDAVCIIN*VAKNCW
Trigger: CCAGCAATTCTTGGCCACGCAGTTGATTATGCAAAC...TGCATCAGGTGCTCCCACTCTTTCCCGGCTTTTAGAAGCTGGTCCTACACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGGGACCTGCAGTCATTaGTCAACTCAGAGTCATTGG +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRGTCSH*STQSHW
Trigger: CCAATGACTCTGAGTTGAGCAATGACTGCAGGTCCC...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTTGCTCCAGGACTTCTTaGCGCATCTCCACAGCCATA +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSCSRTS*RISTAI
Trigger: TATGGCTGTGGAGATGCGGCAAGAAGTCCTGGAGCA...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTATAGCCCATGGTTTCTaGCCTAAAACAGGCAATTGT +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSIAHGF*PKTGNC
Trigger: ACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTAT...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR GCA 90 bp CCATGTGTCCAGCTTGAATTAGTTCTGCATCTCTCTTTAGCCGTCTATATCTCTGGCGTTGGTTCGCGGTaGCTCCTGGGAAATGTCGTT +
Preference number: 4 (lower is better)
Translates to: PCVQLELVLHLSLAVYISGVGSR*LLGNVV
Trigger: AACGACATTTCCCAGGAGGCACCGCGAACCAACGCC...AGAGATATAGACGGCTAAAGAGAGATGCAGAACTAATTCAAGCTGGACACATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432618.5
CDS-3UTR CCA 90 bp TCTCCATACAAGCATGATGGCTTTCTTCCAAATTTTCTGTGCCTGAATAGCTTCCTCTCGGATGGACCATaGCTCTGTGGGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SPYKHDGFLPNFLCLNSFLSDGP*LCGASA
Trigger: AGCACTGGCCCCACAGAGCCATGGTCCATCCGAGAG...GAAGCTATTCAGGCACAGAAAATTTGGAAGAAAGCCATCATGCTTGTATGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp TACTGCTTGACGAGCCTGGTATGCAGCATCTGTAGCCTTCCTCTTTACTTCAGCTGGATAATCACCTCCTaGGGAGGCAGAATCTATAGG +
Preference number: 4 (lower is better)
Translates to: YCLTSLVCSICSLPLYFSWIITS*GGRIYR
Trigger: CCTATAGATTCTGCCTCCCCAGGAGGTGATTATCCA...GCTGAAGTAAAGAGGAAGGCTACAGATGCTGCATACCAGGCTCGTCAAGCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428808.5
ENST00000432618.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ACAGTTTCCACCACTTCTCCCTTTTCACCTCGTTTCCGTTTTGGTGTCTCAGTGCTCTTCCATAGTGGTTaGAGTCAAGTCCCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: TVSTTSPFSPRFRFGVSVLFHSG*SQVPKW
Trigger: CCACTTGGGGACTTGACTCCAACCACTATGGAAGAG...CACTGAGACACCAAAACGGAAACGAGGTGAAAAGGGAGAAGTGGTGGAAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATCCCCACCATGTATCATaGGAAGGACCCCGCCTACCT +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDPHHVS*EGPRLP
Trigger: AGGTAGGCGGGGTCCTTCCCATGATACATGGTGGGG...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGAACAGTCACAGTATGTaGATCCCCCACAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRNSHSM*IPHSLH
Trigger: ATGGAGGCTGTGGGGGATCCACATACTGTGACTGTT...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTCTCCATACTTGTGGCTaGAACAACTCCAGCTACTAT +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFLHTCG*NNSSYY
Trigger: ATAGTAGCTGGAGTTGTTCCAGCCACAAGTATGGAG...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AGCTGCAGCTCTCCATACAAGCATGATGGCTTTCTTCCAAATTTTCTGTGCCTGACTCCTGAGTTCTGGTaGCTCCATACTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SCSSPYKHDGFLPNFLCLTPEFW*LHTCGW
Trigger: CCAGCCACAAGTATGGAGCCACCAGAACTCAGGAGT...CAGGCACAGAAAATTTGGAAGAAAGCCATCATGCTTGTATGGAGAGCTGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GAAGACATTGGCATACCTATGATTAGCTGCAGCTCTCCATACAAGCATGATGGCACTCCTGAGTTCTGGTaGCTCCATACTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: EDIGIPMISCSSPYKHDGTPEFW*LHTCGW
Trigger: CCAGCCACAAGTATGGAGCCACCAGAACTCAGGAGT...GCCATCATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGTCTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTCTGACTCCTGAGTTCTaGTGGCTCCATACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSLTPEF*WLHTCG
Trigger: GCCACAAGTATGGAGCCACCAGAACTCAGGAGTCAG...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp TTGACGAGCCTGGTATGCAGCATCTGTAGCCTTCCTCTTTACTTCAGCCTCCTCCTTCACATTTGTAAGTaGAGTCTCATCGCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LTSLVCSICSLPLYFSLLLHICK*SLIAFP
Trigger: GGGAAAGGCGATGAGACTCCACTTACAAATGTGAAG...GAGGAGGCTGAAGTAAAGAGGAAGGCTACAGATGCTGCATACCAGGCTCGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGCTAAAGGATCTTCAATaGGATTTGAGCCATGTGATG +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWLKDLQ*DLSHVM
Trigger: CATCACATGGCTCAAATCCCATTGAAGATCCTTTAG...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTGGGGCATCCTTTATCTaGCTTCCAAAAATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFGASFI*LPKIVP
Trigger: AGGGACTATTTTTGGAAGCCAGATAAAGGATGCCCC...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCCTCCTCATCCTCACCTaGGGCATCCTTTATCTGGCT +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLLLILT*GILYLA
Trigger: AGCCAGATAAAGGATGCCCCAGGTGAGGATGAGGAG...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTACTGTGGCCAAGAATTGCTaGATCTGTTCCAAGACATCT +
Preference number: 4 (lower is better)
Translates to: VTSTSGTGPASPSSILFTVAKNC*ICSKTS
Trigger: AGATGTCTTGGAACAGATCCAGCAATTCTTGGCCAC...AGTAAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGGTGGCCAAGAATTGCTaGATCTGTTCCAAGACATCT +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFREVAKNC*ICSKTS
Trigger: AGATGTCTTGGAACAGATCCAGCAATTCTTGGCCAC...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp ATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGTTTTCCATCATCCACTaGGTTAGCTGGTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: MRTWQRSTRILSRSEFREFSIIH*VSWFSF
Trigger: GAAGGAGAACCAGCTAACCCAGTGGATGATGGAAAA...CTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp TCAACTCGCTCAGCAGTCAATTTCCGAACAATAACATCTTCAACAGTTTCCACCTGTAACTTCCACCTCTaGAACTGGGCCCGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: STRSAVNFRTITSSTVSTCNFHL*NWARKP
Trigger: GGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACA...GGTGGAAACTGTTGAAGATGTTATTGTTCGGAAATTGACTGCTGAGCGAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATCCAGCTCATGTCGTGTaGCCCAGGTACCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDPAHVV*PRYLLF
Trigger: GAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp TACTGCTTGACGAGCCTGGTATGCAGCATCTGTAGCCTTCCTCTTTACTTCAGCGAAACCCTGGAATTCTaGGAAATAGTGTACCGGCGT +
Preference number: 4 (lower is better)
Translates to: YCLTSLVCSICSLPLYFSETLEF*EIVYRR
Trigger: ACGCCGGTACACTATTTCCCAGAATTCCAGGGTTTC...GCTGAAGTAAAGAGGAAGGCTACAGATGCTGCATACCAGGCTCGTCAAGCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432618.5
CDS-3UTR TCA 90 bp GTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTAGAAAAACACAGTTGTCGGGTTaGCTCACTGGAGCTACACTT +
Preference number: 4 (lower is better)
Translates to: VPGSSLGQSSGRDSNSRKTQLSG*LTGATL
Trigger: AAGTGTAGCTCCAGTGAGTCAACCCGACAACTGTGT...TTTTCTAGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp TCTGCCAGTGTGTGTGACTGCAGTGTAGCATTGTGTATGCTGAAGCCATCATCAAGCCTCTGCTACCCCTaGTCGAAAACACTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SASVCDCSVALCMLKPSSSLCYP*SKTLFF
Trigger: AAAGAAGAGTGTTTTCGATCAGGGGTAGCAGAGGCT...TGATGATGGCTTCAGCATACACAATGCTACACTGCAGTCACACACACTGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CATCATCACTCTCGCTCACAGGAGGTTCATTATCCATTTCTGACAAGTAGCCTTCCAGTCTCTCTTGCTTaGCCGTCATTTCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: HHHSRSQEVHYPFLTSSLPVSLA*PSFLVQ
Trigger: CTGCACCAGAAATGACGGTCAAGCAAGAGAGACTGG...AAGGCTACTTGTCAGAAATGGATAATGAACCTCCTGTGAGCGAGAGTGATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AGGTGCTATGTCATCTGTAACAGGCTGCAGGAAGACATTGGCATACCTATGATTTTTCGGCTCCTGAAATaGCTGGCTCTGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RCYVICNRLQEDIGIPMIFRLLK*LALVLQ
Trigger: CTGCAGAACCAGAGCCAGTCATTTCAGGAGCCGAAA...AATCATAGGTATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TCTGCCAGTGTGTGTGACTGCAGTGTAGCATTGTGTATGCTGAAGCCATCATCATACTATTTCGGCTCCTaGAATGACTGGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SASVCDCSVALCMLKPSSYYFGS*NDWLWF
Trigger: GAACCAGAGCCAGTCATTTCAGGAGCCGAAATAGTA...TGATGATGGCTTCAGCATACACAATGCTACACTGCAGTCACACACACTGGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GACATTGGCATACCTATGATTAGCTGCAGCTCTCCATACAAGCATGATGGCTTTGTCTGCCAGTGTGTGTaGCTGCAGTGTAGCATTGTG +
Preference number: 4 (lower is better)
Translates to: DIGIPMISCSSPYKHDGFVCQCV*LQCSIV
Trigger: CACAATGCTACACTGCAGTCACACACACTGGCAGAC...AAAGCCATCATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp CTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTCTCTCCATACAAGCATaGTGGCTTTCTTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: LFCNFHLWNWARKPKLYLLSIQA*WLSSKF
Trigger: AAATTTGGAAGAAAGCCATCATGCTTGTATGGAGAG...AAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTGACACTGTCCTTCTCTaGAGCATCCTGTTTGCGGGT +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPADTVLL*SILFAG
Trigger: ACCCGCAAACAGGATGCTTCAGAGAAGGACAGTGTC...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR TCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGTTGATTCGTTGCTGCTaGTGCACAAGGGCTCCATTA +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRLIRCC*CTRAPL
Trigger: TAATGGAGCCCTTGTGCATCAGCAGCAACGAATCAA...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTCCTCTTCACTCTCTGTaGGTAGTCCCTGAACTGTAC +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSPLHSL*VVPELY
Trigger: GTACAGTTCAGGGACTACTCACAGAGAGTGAAGAGG...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp TTCCGTTTTGGTGTCTCAGTGGTCTCTAAAAGCTCCGAGTACTGGGAAGCACAAAAAGCTCATCCAGTCTaGTGTCCATGTGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: FRFGVSVVSKSSEYWEAQKAHPV*CPCVQL
Trigger: AAGCTGGACACATGGACAGCAGACTGGATGAGCTTT...TTGTGCTTCCCAGTACTCGGAGCTTTTAGAGACCACTGAGACACCAAAACGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000450756.5
CDS-3UTR GCA 90 bp TTTAAATCAAGCCGATGGAACAAAGATGTGGGCAACATTTATGGCATAAATCCATCCTGCTGGATAGGATaGTCCCAGGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: FKSSRWNKDVGNIYGINPSCWIG*SQGPGR
Trigger: CCTGCCTGGCCCCTGGGAGCATCCTATCCAGCAGGA...TGGATTTATGCCATAAATGTTGCCCACATCTTTGTTCCATCGGCTTGATTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp AAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTCTGTCCTGCTGGATAGGATaGTCCCAGGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KLYLVYFYFRFGSKRVTLSCWIG*SQGPGR
Trigger: CCTGCCTGGCCCCTGGGAGCATCCTATCCAGCAGGA...CAGAGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACACATGGCTTGTCCCGCTCCTaGTGGATAGGATGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VCTIDKTIQTSYDLLATHGLSRS*WIGCSQ
Trigger: CTGGGAGCATCCTATCCAGCAGGAGCGGGACAAGCC...ATGTGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCCAAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTGGCTTGTCCCGCTCCTaGTGGATAGGATGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PKLYLVYFYFRFGSKRVTGLSRS*WIGCSQ
Trigger: CTGGGAGCATCCTATCCAGCAGGAGCGGGACAAGCC...AGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGAACAATCTCTCCAGCTaGAGTACTTCCCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRNNLSS*STSQFL
Trigger: GAGGAACTGGGAAGTACTGCAGCTGGAGAGATTGTT...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp GTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTAGAAAAGTGATGGAGACAACATaGTTTCAGGGGATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VPGSSLGQSSGRDSNSRKVMETT*FQGMPL
Trigger: CAGAGGCATCCCCTGAAAGCATGTTGTCTCCATCAC...TTTTCTAGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCGCTGTGGTAGCCAGGTaGTATGTCATCTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLAVVAR*YVICNR
Trigger: CCTGTTACAGATGACATAGCACCTGGCTACCACAGC...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTCAGTTTCCCTCCAGTTaGCCACATCAAGATCCAGAC +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSQFPSS*PHQDPD
Trigger: GTCTGGATCTTGATGTGGGCAACTGGAGGGAAACTG...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp CCTATTAACCAGCCTTGCAATAGCCAGCCAAATGCTTTGCTTGGGGGATCCAGATTTCATCTTCATATCTaGTTCAATGGCACAGCGGCG +
Preference number: 4 (lower is better)
Translates to: PINQPCNSQPNALLGGSRFHLHI*FNGTAA
Trigger: CGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAA...TCTGGATCCCCCAAGCAAAGCATTTGGCTGGCTATTGCAAGGCTGGTTAATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472478.6
CDS-3UTR GCA 90 bp ATCCATAGGCCTCTGCACAATGCTGTGGTAGCCAGGTGCTATGTCATCTGTAACTTTCATCTTCATATCTaGTTCAATGGCACAGCGGCG +
Preference number: 4 (lower is better)
Translates to: IHRPLHNAVVARCYVICNFHLHI*FNGTAA
Trigger: CGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAA...GTTACAGATGACATAGCACCTGGCTACCACAGCATTGTGCAGAGGCCTATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCAAGAAAGGCCTTTCCTaGAGACTGACCCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLKKGLS*RLTLAL
Trigger: TAGTGCCAGGGTCAGTCTGCAGGAAAGGCCTTTCTT...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472478.6
CDS-3UTR GCA 90 bp TCTGCCAGTGTGTGTGACTGCAGTGTAGCATTGTGTATGCTGAAGCCATCATCATTCCTTCTTTCCCCTTaGTCGAGAGTAACTCTGACC +
Preference number: 4 (lower is better)
Translates to: SASVCDCSVALCMLKPSSFLLSP*SRVTLT
Trigger: GGTCAGAGTTACTCTCGAGCAAGGGGAAAGAAGGAA...TGATGATGGCTTCAGCATACACAATGCTACACTGCAGTCACACACACTGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506167.5
CDS-3UTR CCA 90 bp CCCAAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTCTCTCGGATGGACCATaGCTCTGTGGGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PKLYLVYFYFRFGSKRVTLSDGP*LCGASA
Trigger: AGCACTGGCCCCACAGAGCCATGGTCCATCCGAGAG...AGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TCCTTTATCACTTTCTTTAGTTCTTCAACTCGCTCAGCAGTCAATTTCCGAACACTCTCGGATGGACCATaGCTCTGTGGGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SFITFFSSSTRSAVNFRTLSDGP*LCGASA
Trigger: AGCACTGGCCCCACAGAGCCATGGTCCATCCGAGAG...TGTTCGGAAATTGACTGCTGAGCGAGTTGAAGAACTAAAGAAAGTGATAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000428808.5
ENST00000432618.5
ENST00000450756.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGTGGATAATCACCTCCTaGGGAGGCAGAATCTATAGG +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRWIITS*GGRIYR
Trigger: CCTATAGATTCTGCCTCCCCAGGAGGTGATTATCCA...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp CATTTCACTCTCATTGACCCCAGAGGTAGCCTCTTCCATAGTGGTTGGAGTCAATGGATAATCACCTCCTaGGGAGGCAGAATCTATAGG +
Preference number: 4 (lower is better)
Translates to: HFTLIDPRGSLFHSGWSQWIITS*GGRIYR
Trigger: CCTATAGATTCTGCCTCCCCAGGAGGTGATTATCCA...TTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTCAATGAGAGTGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATAAAGCCGGGAAAGAGTaGGAGCACCTGATGCAGCAG +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDKAGKE*EHLMQQ
Trigger: CTGCTGCATCAGGTGCTCCCACTCTTTCCCGGCTTT...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TTGAGCCATGTGATGGAGACAACATGCTTTCAGGGGATGCCTCTGTCTTCACATATGACAATGGTAGCTTaGGACACAGACTCTACAGGG +
Preference number: 4 (lower is better)
Translates to: LSHVMETTCFQGMPLSSHMTMVA*DTDSTG
Trigger: CCCTGTAGAGTCTGTGTCCCAAGCTACCATTGTCAT...ATGTGAAGACAGAGGCATCCCCTGAAAGCATGTTGTCTCCATCACATGGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCCCTTCCCATCTATGCTaGGAGCCTTTGATCCAACAG +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLPSHLC*EPLIQQ
Trigger: CTGTTGGATCAAAGGCTCCCAGCATAGATGGGAAGG...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCCAAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTTTGTCCCGCTCCTGCTaGATAGGATGCTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PKLYLVYFYFRFGSKRVTLSRSC*IGCSQG
Trigger: CCCCTGGGAGCATCCTATCCAGCAGGAGCGGGACAA...AGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCCAAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTTGCAGGGAGAGGTACTaGCTTGTCCCGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PKLYLVYFYFRFGSKRVTCRERY*LVPLLL
Trigger: CAGCAGGAGCGGGACAAGCCAGTACCTCTCCCTGCA...AGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GCCAGGTGCTATGTCATCTGTAACAGGCTGCAGGAAGACATTGGCATACCTATGCTCCATACTTGTGGCTaGAACAACTCCAGCTACTAT +
Preference number: 4 (lower is better)
Translates to: ARCYVICNRLQEDIGIPMLHTCG*NNSSYY
Trigger: ATAGTAGCTGGAGTTGTTCCAGCCACAAGTATGGAG...CATAGGTATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCTGGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTAGAAAAGTGGCTCCATACTTGTaGCTGGAACAACTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: VPGSSLGQSSGRDSNSRKVAPYL*LEQLQL
Trigger: TAGCTGGAGTTGTTCCAGCCACAAGTATGGAGCCAC...TTTTCTAGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCGTGGCTCCATACTTGTaGCTGGAACAACTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLVAPYL*LEQLQL
Trigger: TAGCTGGAGTTGTTCCAGCCACAAGTATGGAGCCAC...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AGCCATCATCACTCTCGCTCACAGGAGGTTCATTATCCATTTCTGACAAGTAGCGTGGCTCCATACTTGTaGCTGGAACAACTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: SHHHSRSQEVHYPFLTSSVAPYL*LEQLQL
Trigger: TAGCTGGAGTTGTTCCAGCCACAAGTATGGAGCCAC...GCTACTTGTCAGAAATGGATAATGAACCTCCTGTGAGCGAGAGTGATGATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTACTCCTGAGTTCTGGTaGCTCCATACTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPATPEFW*LHTCGW
Trigger: CCAGCCACAAGTATGGAGCCACCAGAACTCAGGAGT...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTCTGACTCCTGAGTTCTaGTGGCTCCATACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPALTPEF*WLHTCG
Trigger: GCCACAAGTATGGAGCCACCAGAACTCAGGAGTCAG...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCCATCGCCTTTCCCAATaGCAACATCTGCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: TWQRSTRILSRSEFRERFHRLSQ*QHLLQQ
Trigger: TTGTTGAAGCAGATGTTGCCATTGGGAAAGGCGATG...GAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp ACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCCTTCACATTTGTAAGTaGAGTCTCATCGCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: TWQRSTRILSRSEFRERFLHICK*SLIAFP
Trigger: GGGAAAGGCGATGAGACTCCACTTACAAATGTGAAG...GAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp CCTCTGCACAATGCTGTGGTAGCCAGGTGCTATGTCATCTGTAACAGGCTGCAGCTAAAGGATCTTCAATaGGATTTGAGCCATGTGATG +
Preference number: 4 (lower is better)
Translates to: PLHNAVVARCYVICNRLQLKDLQ*DLSHVM
Trigger: CATCACATGGCTCAAATCCCATTGAAGATCCTTTAG...CTGCAGCCTGTTACAGATGACATAGCACCTGGCTACCACAGCATTGTGCAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCCAAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTCAGGGCTGCTGGGGATaGAGTCTGCCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PKLYLVYFYFRFGSKRVTQGCWG*SLPVCV
Trigger: CACACACACTGGCAGACTCCATCCCCAGCAGCCCTG...AGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAAGGAAACGAGGTGACTaGGGTACTCGGCAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SALKQAIVLLQLSKRDFPRKRGD*GTRQSP
Trigger: GGGACTTTGCCGAGTACCCCAGTCACCTCGTTTCCT...TGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230901.9
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR CCA 90 bp TTCCAGCTCATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTCCAAGCATCTTTTTCTaGGGTGAATCATCTGTTACT +
Preference number: 4 (lower is better)
Translates to: FQLMSCGPGTSSSVTSTSPSIFF*GESSVT
Trigger: AGTAACAGATGATTCACCCCAGAAAAAGATGCTTGG...AGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATGAGCTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230901.9
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR CCA 90 bp CCCAAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTCACAGCGGCGTCCCCTaGTTCCTCCATCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PKLYLVYFYFRFGSKRVTHSGVP*FLHPSL
Trigger: CAGAGAAGGATGGAGGAACCAGGGGACGCCGCTGTG...AGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR CCA 90 bp GTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACACATCACAGCGGCGTCCCCTaGTTCCTCCATCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VCTIDKTIQTSYDLLATHHSGVP*FLHPSL
Trigger: CAGAGAAGGATGGAGGAACCAGGGGACGCCGCTGTG...ATGTGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR CCA 90 bp CTCTCATTGACCCCAGAGGTAGCCTCTTCCATAGTGGTTGGAGTCAAGTCCCCAAAAAGCTCCGAGTACTaGGAAGCACAATGCAATTTT +
Preference number: 4 (lower is better)
Translates to: LSLTPEVASSIVVGVKSPKSSEY*EAQCNF
Trigger: AAAATTGCATTGTGCTTCCCAGTACTCGGAGCTTTT...TGGGGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTCAATGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTAGCCTCTGCTACCCCTaGTCGAAAACACTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSSLCYP*SKTLFF
Trigger: AAAGAAGAGTGTTTTCGATCAGGGGTAGCAGAGGCT...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp GAAGACATTGGCATACCTATGATTAGCTGCAGCTCTCCATACAAGCATGATGGCAGCCTCTGCTACCCCTaGTCGAAAACACTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: EDIGIPMISCSSPYKHDGSLCYP*SKTLFF
Trigger: AAAGAAGAGTGTTTTCGATCAGGGGTAGCAGAGGCT...GCCATCATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATCCAGTCTCTCTTGCTTaGCCGTCATTTCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDPVSLA*PSFLVQ
Trigger: CTGCACCAGAAATGACGGTCAAGCAAGAGAGACTGG...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCACCAGTCTCTCTTGCTTaGCCGTCATTTCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SALKQAIVLLQLSKRDFPPVSLA*PSFLVQ
Trigger: CTGCACCAGAAATGACGGTCAAGCAAGAGAGACTGG...TGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTCTGCTGCAGGTTCCACCTTaGTCTCTGCACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KLYLVYFYFRFGSKRVTLLQVPP*SLHWAP
Trigger: GGGAGCCCAGTGCAGAGATCAAGGTGGAACCTGCAG...CAGAGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTAGAAAAAGCATAATGTCACGCTaGAATTCAGCTGTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: VPGSSLGQSSGRDSNSRKSIMSR*NSAVLR
Trigger: CCGAAGCACAGCTGAATTTCAGCGTGACATTATGCT...TTTTCTAGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp GAAGACATTGGCATACCTATGATTAGCTGCAGCTCTCCATACAAGCATGATGGCAGCATAATGTCACGCTaGAATTCAGCTGTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: EDIGIPMISCSSPYKHDGSIMSR*NSAVLR
Trigger: CCGAAGCACAGCTGAATTTCAGCGTGACATTATGCT...GCCATCATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGTCTTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCTTGTTTATAGACATCATGGTCTaGGCTATTGTACATTACAGC +
Preference number: 4 (lower is better)
Translates to: SVTSTSGTGPASPSSILFIDIMV*AIVHYS
Trigger: GCTGTAATGTACAATAGCTCAGACCATGATGTCTAT...AAACAAGATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGTCAGAGTCATTGGGATaGTCTTGTTCAGAATCCAGC +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRSESLG*SCSESS
Trigger: GCTGGATTCTGAACAAGATCATCCCAATGACTCTGA...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTTCAGAAATGGACTGCTaGACCTGTGACTGGCAATCA +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSSEMDC*TCDWQS
Trigger: TGATTGCCAGTCACAGGTTCAGCAGTCCATTTCTGA...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGTCCACATGCATCTTTaGCTCGTTGGTTGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRVHMHL*LVGCEL
Trigger: TAACTCACAACCAACGAGTCAAAGATGCATGTGGAC...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp GTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACACATTCCCAGGAAACGAGGTaGCTGGGGTACTCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VCTIDKTIQTSYDLLATHSQETR*LGYSAK
Trigger: CTTTGCCGAGTACCCCAGTCACCTCGTTTCCTGGGA...ATGTGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230901.9
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR GCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGTCGTTGCAATGTCATTaGAAAGCTCATCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRSLQCH*KAHPVC
Trigger: GCAGACTGGATGAGCTTTGCAATGACATTGCAACGA...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp CATGTCGTGTGGCCCAGGTACCTCCTCTTCTGTAACTTCCACCTCTGGAACTGGCAATTTCTTTTTCGTTaGAATGTCATTGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: HVVWPRYLLFCNFHLWNWQFLFR*NVIAKL
Trigger: GAGCTTTGCAATGACATTGCAACGAAAAAGAAATTG...CCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAGGTACCTGGGCCACACGACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CTCCTCTTCTGTAACTTCCACCTCTGGAACTGGGCCCGCAAGCCCAAGCTCTATCAATTTCTTTTTCGTTaGAATGTCATTGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LLFCNFHLWNWARKPKLYQFLFR*NVIAKL
Trigger: GAGCTTTGCAATGACATTGCAACGAAAAAGAAATTG...ATAGAGCTTGGGCTTGCGGGCCCAGTTCCAGAGGTGGAAGTTACAGAAGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TTTAAATCAAGCCGATGGAACAAAGATGTGGGCAACATTTATGGCATAAATCCACGGAGCAGAGGATGGTaGTGGCAGCGCAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: FKSSRWNKDVGNIYGINPRSRGW*WQRRHH
Trigger: ATGATGCCTGCGCTGCCAGCACCATCCTCTGCTCCG...TGGATTTATGCCATAAATGTTGCCCACATCTTTGTTCCATCGGCTTGATTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp AAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTCTGCGGAGCAGAGGATGGTaGTGGCAGCGCAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: KLYLVYFYFRFGSKRVTLRSRGW*WQRRHH
Trigger: ATGATGCCTGCGCTGCCAGCACCATCCTCTGCTCCG...CAGAGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTAGAAAACTTCCTTCCCATCTATaGTGGGAGCCTTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: VPGSSLGQSSGRDSNSRKLPSHL*WEPLIQ
Trigger: TTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAG...TTTTCTAGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCCTTCCTTCCCATCTATaGTGGGAGCCTTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLLPSHL*WEPLIQ
Trigger: TTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAG...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ATCACTTTCTTTAGTTCTTCAACTCGCTCAGCAGTCAATTTCCGAACAATAACAGGCTTGTCCCGCTCCTaGTGGATAGGATGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ITFFSSSTRSAVNFRTITGLSRS*WIGCSQ
Trigger: CTGGGAGCATCCTATCCAGCAGGAGCGGGACAAGCC...TGTTATTGTTCGGAAATTGACTGCTGAGCGAGTTGAAGAACTAAAGAAAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATGACTGGCTCTGGTTCTaGAGGTTCCACCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDDWLWF*RFHLDL
Trigger: GAGATCAAGGTGGAACCTGCAGAACCAGAGCCAGTC...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCAACAATCTCTCCAGCTaGAGTACTTCCCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLNNLSS*STSQFL
Trigger: GAGGAACTGGGAAGTACTGCAGCTGGAGAGATTGTT...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCCCCAATGGCAACATCTaGTTCAACAATCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLPNGNI*FNNLSS
Trigger: GCTGGAGAGATTGTTGAAGCAGATGTTGCCATTGGG...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TTTTTCATCTTCATATCTGCTTCAATGGCACAGCGGCGTCCCCTGGTTCCTCCAATAGCCCATGGTTTCTaGCCTAAAACAGGCAATTGT +
Preference number: 4 (lower is better)
Translates to: FFIFISASMAQRRPLVPPIAHGF*PKTGNC
Trigger: ACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTAT...TGGAGGAACCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp TTCTTTAGTTCTTCAACTCGCTCAGCAGTCAATTTCCGAACAATAACATCTTCACTCTCGGATGGACCATaGCTCTGTGGGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: FFSSSTRSAVNFRTITSSLSDGP*LCGASA
Trigger: AGCACTGGCCCCACAGAGCCATGGTCCATCCGAGAG...TGAAGATGTTATTGTTCGGAAATTGACTGCTGAGCGAGTTGAAGAACTAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000428808.5
ENST00000432618.5
ENST00000450756.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AAAGTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACACTCTCGGATGGACCATaGCTCTGTGGGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: KVCTIDKTIQTSYDLLATLSDGP*LCGASA
Trigger: AGCACTGGCCCCACAGAGCCATGGTCCATCCGAGAG...TGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CTTCCAATTTCTTTTTCGTTGCAATGTCATTGCAAAGCTCATCCAGTCTGCTGTATAGCTTCTCTCGGATaGACCATGGCTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LPISFSLQCHCKAHPVCCIASLG*TMALWG
Trigger: GCCCCACAGAGCCATGGTCCATCCGAGAGAAGCTAT...ACAGCAGACTGGATGAGCTTTGCAATGACATTGCAACGAAAAAGAAATTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000428808.5
ENST00000432618.5
ENST00000450756.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TTCTTCAACTCGCTCAGCAGTCAATTTCCGAACAATAACATCTTCAACAGTTTCTTGAGAGAACCAGTCTaGAGGGCGGCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FFNSLSSQFPNNNIFNSFLREPV*RAARFC
Trigger: GCAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAA...GAAACTGTTGAAGATGTTATTGTTCGGAAATTGACTGCTGAGCGAGTTGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428808.5
ENST00000432618.5
ENST00000450756.5
CDS-3UTR CCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTCTCTTCCATAGTGGTTaGAGTCAAGTCCCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPALFHSG*SQVPKW
Trigger: CCACTTGGGGACTTGACTCCAACCACTATGGAAGAG...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTAGGCTGCAACAGTATTaGGTGTTTGCTGTATCTCCC +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSRLQQY*VFAVSP
Trigger: GGGAGATACAGCAAACACCCAATACTGTTGCAGCCT...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTTGGCACAAGTTTAACTaGAGGCTCACTGGCAACAGT +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSWHKFN*RLTGNS
Trigger: ACTGTTGCCAGTGAGCCTCCAGTTAAACTTGTGCCA...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTGTCGGGTTGACTCACTaGAGCTACACTTTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSVGLTH*SYTFSS
Trigger: ACTACTGAAAGTGTAGCTCCAGTGAGTCAACCCGAC...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp GTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACACATCCCCCACAGCCTCCATaGGAACACAGTTGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: VCTIDKTIQTSYDLLATHPPQPP*EHSCRV
Trigger: AACCCGACAACTGTGTTCCCATGGAGGCTGTGGGGG...ATGTGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp CCCAAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTCCCCCACAGCCTCCATaGGAACACAGTTGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: PKLYLVYFYFRFGSKRVTPPQPP*EHSCRV
Trigger: AACCCGACAACTGTGTTCCCATGGAGGCTGTGGGGG...AGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTAACAGTCACAGTATGTaGATCCCCCACAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPANSHSM*IPHSLH
Trigger: ATGGAGGCTGTGGGGGATCCACATACTGTGACTGTT...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTCCTTCCCATCTATGCTaGGAGCCTTTGATCCAACAG +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPAPSHLC*EPLIQQ
Trigger: CTGTTGGATCAAAGGCTCCCAGCATAGATGGGAAGG...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ATTGTGTATGCTGAAGCCATCATCACTCTCGCTCACAGGAGGTTCATTATCCATCCTTCCCATCTATGCTaGGAGCCTTTGATCCAACAG +
Preference number: 4 (lower is better)
Translates to: IVYAEAIITLAHRRFIIHPSHLC*EPLIQQ
Trigger: CTGTTGGATCAAAGGCTCCCAGCATAGATGGGAAGG...ATGGATAATGAACCTCCTGTGAGCGAGAGTGATGATGGCTTCAGCATACACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TTTAAATCAAGCCGATGGAACAAAGATGTGGGCAACATTTATGGCATAAATCCATTGTCCCGCTCCTGCTaGATAGGATGCTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: FKSSRWNKDVGNIYGINPLSRSC*IGCSQG
Trigger: CCCCTGGGAGCATCCTATCCAGCAGGAGCGGGACAA...TGGATTTATGCCATAAATGTTGCCCACATCTTTGTTCCATCGGCTTGATTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp TCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAACTCCTGAGTTCTGGTaGCTCCATACTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SALKQAIVLLQLSKRDFPTPEFW*LHTCGW
Trigger: CCAGCCACAAGTATGGAGCCACCAGAACTCAGGAGT...TGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATCTGACTCCTGAGTTCTaGTGGCTCCATACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDLTPEF*WLHTCG
Trigger: GCCACAAGTATGGAGCCACCAGAACTCAGGAGTCAG...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACACATCACAGCGGCGTCCCCTaGTTCCTCCATCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: VCTIDKTIQTSYDLLATHHSGVP*FLHQRE
Trigger: CTCTCTTTGATGGAGGAACCAGGGGACGCCGCTGTG...ATGTGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TTCTTTAGTTCTTCAACTCGCTCAGCAGTCAATTTCCGAACAATAACATCTTCAATACCCTGCGGCCTGTaGTCCCAGCTACTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FFSSSTRSAVNFRTITSSIPCGL*SQLLGQ
Trigger: CTGCCCAAGTAGCTGGGACCACAGGCCGCAGGGTAT...TGAAGATGTTATTGTTCGGAAATTGACTGCTGAGCGAGTTGAAGAACTAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450756.5
CDS-3UTR TCA 90 bp TCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAACACAGTTGTCGGGTTaGCTCACTGGAGCTACACTT +
Preference number: 4 (lower is better)
Translates to: SALKQAIVLLQLSKRDFPTQLSG*LTGATL
Trigger: AAGTGTAGCTCCAGTGAGTCAACCCGACAACTGTGT...TGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTTACTATTTCGGCTCCTaGAATGACTGGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPAYYFGS*NDWLWF
Trigger: GAACCAGAGCCAGTCATTTCAGGAGCCGAAATAGTA...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TCTCCATACAAGCATGATGGCTTTCTTCCAAATTTTCTGTGCCTGAATAGCTTCTCCTCATCTAAGTCCTaGCTCCTGAGTTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SPYKHDGFLPNFLCLNSFSSSKS*LLSSGG
Trigger: GCCACCAGAACTCAGGAGTCAGGACTTAGATGAGGA...GAAGCTATTCAGGCACAGAAAATTTGGAAGAAAGCCATCATGCTTGTATGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TCTGCCAGTGTGTGTGACTGCAGTGTAGCATTGTGTATGCTGAAGCCATCATCAATTTCAAACTTGTGCTaGGTCTCTGCCTCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: SASVCDCSVALCMLKPSSISNLC*VSASKG
Trigger: TCCTTTAGAGGCAGAGACTCAGCACAAGTTTGAAAT...TGATGATGGCTTCAGCATACACAATGCTACACTGCAGTCACACACACTGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GCCAGGTGCTATGTCATCTGTAACAGGCTGCAGGAAGACATTGGCATACCTATGTTCATTATCCATTTCTaGCAAGTAGCCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ARCYVICNRLQEDIGIPMFIIHF*QVAFSL
Trigger: CAAGGAGAAGGCTACTTGTCAGAAATGGATAATGAA...CATAGGTATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCACCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TACTGCTTGACGAGCCTGGTATGCAGCATCTGTAGCCTTCCTCTTTACTTCAGCTTCATTATCCATTTCTaGCAAGTAGCCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: YCLTSLVCSICSLPLYFSFIIHF*QVAFSL
Trigger: CAAGGAGAAGGCTACTTGTCAGAAATGGATAATGAA...GCTGAAGTAAAGAGGAAGGCTACAGATGCTGCATACCAGGCTCGTCAAGCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTACATTGGCATACCTATaGTTAGCTGCAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSTLAYL*LAAALH
Trigger: ATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGT...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCACATTGGCATACCTATaGTTAGCTGCAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLTLAYL*LAAALH
Trigger: ATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGT...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AGCCATCATCACTCTCGCTCACAGGAGGTTCATTATCCATTTCTGACAAGTAGCACATTGGCATACCTATaGTTAGCTGCAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SHHHSRSQEVHYPFLTSSTLAYL*LAAALH
Trigger: ATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGT...GCTACTTGTCAGAAATGGATAATGAACCTCCTGTGAGCGAGAGTGATGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AAAGTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACATCCCAGGAAACGAGGTaGCTGGGGTACTCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: KVCTIDKTIQTSYDLLATSQETR*LGYSAK
Trigger: CTTTGCCGAGTACCCCAGTCACCTCGTTTCCTGGGA...TGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230901.9
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR TCA 90 bp ATCACTTTCTTTAGTTCTTCAACTCGCTCAGCAGTCAATTTCCGAACAATAACACGAAGTCTCCAACCCTaGGGAGAGACGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ITFFSSSTRSAVNFRTITRSLQP*GETVWK
Trigger: CTTCCAGACCGTCTCTCCTCAGGGTTGGAGACTTCG...TGTTATTGTTCGGAAATTGACTGCTGAGCGAGTTGAAGAACTAAAGAAAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432618.5
CDS-3UTR TCA 90 bp TCCTTTATCACTTTCTTTAGTTCTTCAACTCGCTCAGCAGTCAATTTCCGAACAGATTGCTCTGCTAACTaGTACCCTGCGGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SFITFFSSSTRSAVNFRTDCSAN*YPAACG
Trigger: ACCACAGGCCGCAGGGTATCAGTTAGCAGAGCAATC...TGTTCGGAAATTGACTGCTGAGCGAGTTGAAGAACTAAAGAAAGTGATAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450756.5
CDS-3UTR GCA 90 bp TTTCACCTCGTTTCCGTTTTGGTGTCTCAGTGGTCTCTAAAAGCTCCGAGTACTTCGTTGCAATGTCATTaGAAAGCTCATCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: FHLVSVLVSQWSLKAPSTSLQCH*KAHPVC
Trigger: GCAGACTGGATGAGCTTTGCAATGACATTGCAACGA...AGTACTCGGAGCTTTTAGAGACCACTGAGACACCAAAACGGAAACGAGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428808.5
ENST00000450756.5
CDS-3UTR GCA 90 bp ACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCTCATGGATATTTCACTaGTGTCCATGGAAACAGTCA +
Preference number: 4 (lower is better)
Translates to: TWQRSTRILSRSEFRERFSWIFH*CPWKQS
Trigger: TGACTGTTTCCATGGACAGCAGTGAAATATCCATGA...GAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR GCA 90 bp CATCATCACTCTCGCTCACAGGAGGTTCATTATCCATTTCTGACAAGTAGCCTTCTTCCTTCCCATCTATaGTGGGAGCCTTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: HHHSRSQEVHYPFLTSSLLPSHL*WEPLIQ
Trigger: TTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAG...AAGGCTACTTGTCAGAAATGGATAATGAACCTCCTGTGAGCGAGAGTGATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCCAAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTTGCTGCTTCCACTGCTaGCACATCCAGCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: PKLYLVYFYFRFGSKRVTCCFHC*HIQHFR
Trigger: CCTGAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCA...AGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp CCCAAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTCAGTGCTGCTTCCACTaGTGCCACATCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: PKLYLVYFYFRFGSKRVTQCCFH*CHIQHF
Trigger: GAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCACTG...AGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp AACATAGCCCATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCAAGTCCAGTCTCTCTTaGTTGACCGTCATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: NIAHGFCPKTGNCATPTLKSSLS*LTVISG
Trigger: ACCAGAAATGACGGTCAAGCAAGAGAGACTGGACTT...GAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCATGGGCTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp AGCCATCATCACTCTCGCTCACAGGAGGTTCATTATCCATTTCTGACAAGTAGCAAGTCCAGTCTCTCTTaGTTGACCGTCATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SHHHSRSQEVHYPFLTSSKSSLS*LTVISG
Trigger: ACCAGAAATGACGGTCAAGCAAGAGAGACTGGACTT...GCTACTTGTCAGAAATGGATAATGAACCTCCTGTGAGCGAGAGTGATGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTAACAATCTCTCCAGCTaGAGTACTTCCCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPANNLSS*STSQFL
Trigger: GAGGAACTGGGAAGTACTGCAGCTGGAGAGATTGTT...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ATTGTGTATGCTGAAGCCATCATCACTCTCGCTCACAGGAGGTTCATTATCCATAACAATCTCTCCAGCTaGAGTACTTCCCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: IVYAEAIITLAHRRFIIHNNLSS*STSQFL
Trigger: GAGGAACTGGGAAGTACTGCAGCTGGAGAGATTGTT...ATGGATAATGAACCTCCTGTGAGCGAGAGTGATGATGGCTTCAGCATACACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTGCCAGTGTGTGTGACTaGAGTGTAGCATTGTGTATG +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPAASVCD*SVALCM
Trigger: CATACACAATGCTACACTGCAGTCACACACACTGGC...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GACATTGGCATACCTATGATTAGCTGCAGCTCTCCATACAAGCATGATGGCTTTGCCAGTGTGTGTGACTaGAGTGTAGCATTGTGTATG +
Preference number: 4 (lower is better)
Translates to: DIGIPMISCSSPYKHDGFASVCD*SVALCM
Trigger: CATACACAATGCTACACTGCAGTCACACACACTGGC...AAAGCCATCATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATGCTGTGGTAGCCAGGTaGTATGTCATCTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDAVVAR*YVICNR
Trigger: CCTGTTACAGATGACATAGCACCTGGCTACCACAGC...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TCTGCCAGTGTGTGTGACTGCAGTGTAGCATTGTGTATGCTGAAGCCATCATCAGCTGAAATTCAGCTGTaGTTCGGATCAGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: SASVCDCSVALCMLKPSSAEIQL*FGSVHF
Trigger: AAAATGGACTGATCCGAAGCACAGCTGAATTTCAGC...TGATGATGGCTTCAGCATACACAATGCTACACTGCAGTCACACACACTGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTTCGCTGCATCTCCACTaGCATGTGATAGACATCATG +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPASLHLH*HVIDIM
Trigger: CATGATGTCTATCACATGGCAGTGGAGATGCAGCGA...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TGGATAATCACCTCCTGGGGAGGCAGAATCTATAGGAGAGCGAACCATCACAGTAAACCAGTTACCCTGTaGACTCCTGTTAAGATTGTT +
Preference number: 4 (lower is better)
Translates to: WIITSWGGRIYRRANHHSKPVTL*TPVKIV
Trigger: AACAATCTTAACAGGAGTGCACAGGGTAACTGGTTT...ACTGTGATGGTTCGCTCTCCTATAGATTCTGCCTCCCCAGGAGGTGATTATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432618.5
CDS-3UTR CCA 90 bp AAAGTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACATGGACCATGGCTCTGTaGGGCCAGTGCTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KVCTIDKTIQTSYDLLATWTMAL*GQCLAA
Trigger: AGCTGCTAAGCACTGGCCCCACAGAGCCATGGTCCA...TGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp GTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACACATATAGCTTCTCTCGGATaGACCATGGCTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VCTIDKTIQTSYDLLATHIASLG*TMALWG
Trigger: GCCCCACAGAGCCATGGTCCATCCGAGAGAAGCTAT...ATGTGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TTCTTCCAATTTCTTTTTCGTTGCAATGTCATTGCAAAGCTCATCCAGTCTGCTATAGCTTCTCTCGGATaGACCATGGCTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FFQFLFRCNVIAKLIQSAIASLG*TMALWG
Trigger: GCCCCACAGAGCCATGGTCCATCCGAGAGAAGCTAT...AGCAGACTGGATGAGCTTTGCAATGACATTGCAACGAAAAAGAAATTGGAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000428808.5
ENST00000432618.5
ENST00000450756.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TTTAAATCAAGCCGATGGAACAAAGATGTGGGCAACATTTATGGCATAAATCCATTGAGAGAACCAGTCTaGAGGGCGGCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FKSSRWNKDVGNIYGINPLREPV*RAARFC
Trigger: GCAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAA...TGGATTTATGCCATAAATGTTGCCCACATCTTTGTTCCATCGGCTTGATTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp AAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTCTGTTGAGAGAACCAGTCTaGAGGGCGGCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KLYLVYFYFRFGSKRVTLLREPV*RAARFC
Trigger: GCAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAA...CAGAGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR CCA 90 bp AAAGTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACATTGAGAGAACCAGTCTaGAGGGCGGCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KVCTIDKTIQTSYDLLATLREPV*RAARFC
Trigger: GCAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAA...TGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR CCA 90 bp GTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTAGAAAAGTTTTGGTGTCTCAGTaGTCTCTAAAAGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: VPGSSLGQSSGRDSNSRKVLVSQ*SLKAPS
Trigger: ACTCGGAGCTTTTAGAGACCACTGAGACACCAAAAC...TTTTCTAGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp TCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCACTCTTCCATAGTGGTTaGAGTCAAGTCCCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: SALKQAIVLLQLSKRDFPLFHSG*SQVPKW
Trigger: CCACTTGGGGACTTGACTCCAACCACTATGGAAGAG...TGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TTTAAATCAAGCCGATGGAACAAAGATGTGGGCAACATTTATGGCATAAATCCACCCCCACAGCCTCCATaGGAACACAGTTGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: FKSSRWNKDVGNIYGINPPPQPP*EHSCRV
Trigger: AACCCGACAACTGTGTTCCCATGGAGGCTGTGGGGG...TGGATTTATGCCATAAATGTTGCCCACATCTTTGTTCCATCGGCTTGATTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp TCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCACCTTCCCATCTATGCTaGGAGCCTTTGATCCAACAG +
Preference number: 4 (lower is better)
Translates to: SALKQAIVLLQLSKRDFPPSHLC*EPLIQQ
Trigger: CTGTTGGATCAAAGGCTCCCAGCATAGATGGGAAGG...TGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR CCA 90 bp TTTATCACTTTCTTTAGTTCTTCAACTCGCTCAGCAGTCAATTTCCGAACAATATTGTCCCGCTCCTGCTaGATAGGATGCTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: FITFFSSSTRSAVNFRTILSRSC*IGCSQG
Trigger: CCCCTGGGAGCATCCTATCCAGCAGGAGCGGGACAA...TATTGTTCGGAAATTGACTGCTGAGCGAGTTGAAGAACTAAAGAAAGTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR CCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTCTCCATACTTGTGGCTaGAACAACTCCAGCTACTAT +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSLHTCG*NNSSYY
Trigger: ATAGTAGCTGGAGTTGTTCCAGCCACAAGTATGGAG...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp AGCCATCATCACTCTCGCTCACAGGAGGTTCATTATCCATTTCTGACAAGTAGCCATCGCCTTTCCCAATaGCAACATCTGCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: SHHHSRSQEVHYPFLTSSHRLSQ*QHLLQQ
Trigger: TTGTTGAAGCAGATGTTGCCATTGGGAAAGGCGATG...GCTACTTGTCAGAAATGGATAATGAACCTCCTGTGAGCGAGAGTGATGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR CCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTGGGGCATCCTTTATCTaGCTTCCAAAAATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSGASFI*LPKIVP
Trigger: AGGGACTATTTTTGGAAGCCAGATAAAGGATGCCCC...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp TTTAAATCAAGCCGATGGAACAAAGATGTGGGCAACATTTATGGCATAAATCCATGGAGGAGGTTCTGGTaGCTGGCTTTCCTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: FKSSRWNKDVGNIYGINPWRRFW*LAFLAA
Trigger: AGCGGCAAGGAAAGCCAGCCACCAGAACCTCCTCCA...TGGATTTATGCCATAAATGTTGCCCACATCTTTGTTCCATCGGCTTGATTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR CCA 90 bp CCCAAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTTCATATCTGCTTCAATaGCACAGCGGCGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PKLYLVYFYFRFGSKRVTSYLLQ*HSGVPW
Trigger: CCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGA...AGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR CCA 90 bp AAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTCTGCCAGCTCATGTCGTGTaGCCCAGGTACCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KLYLVYFYFRFGSKRVTLPAHVV*PRYLLF
Trigger: GAAGAGGAGGTACCTGGGCCACACGACATGAGCTGG...CAGAGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000472478.6
ENST00000512140.5
3UTR CAA 72 bp TCGAAGACTTTTAGCACTGATCCCAGACTCGGATGTTaGCATAATCAACTGCGTGGCCAAGAATTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SKTFSTDPRLGC*HNQLRGQELLD
Trigger: ATCCAGCAATTCTTGGCCACGCAGTTGATTATGCAAACATCCGAGTCTGGGATCAGTGCTAAAAGTCTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR TCA 90 bp GTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTAGAAAAGATCGCCACTTCTCATaGCAGAAGATGCTAAACATA +
Preference number: 4 (lower is better)
Translates to: VPGSSLGQSSGRDSNSRKDRHFS*QKMLNI
Trigger: TATGTTTAGCATCTTCTGTCATGAGAAGTGGCGATC...TTTTCTAGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTACTGATACCCAATTTTaGTCGCCACTTCTCATGACA +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSTDTQF*SPLLMT
Trigger: TGTCATGAGAAGTGGCGATCAAAATTGGGTATCAGT...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp TCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGAAGCACAATGTTTTTaGGAGAACCAGTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SALKQAIVLLQLSKRDFPEAQCF*ENQSGG
Trigger: CCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTC...TGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR TCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTTCCATGTGTCCAGCTTaGATTAGTTCTGCATCTCTC +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPASMCPA*ISSASL
Trigger: GAGAGATGCAGAACTAATTCAAGCTGGACACATGGA...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATAGCCTCTGCTACCCCTaGTCGAAAACACTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDSLCYP*SKTLFF
Trigger: AAAGAAGAGTGTTTTCGATCAGGGGTAGCAGAGGCT...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp TTTAAATCAAGCCGATGGAACAAAGATGTGGGCAACATTTATGGCATAAATCCATATGCTGGGAGCCTTTaGTCCAACAGGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: FKSSRWNKDVGNIYGINPYAGSL*SNRSLC
Trigger: GCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATA...TGGATTTATGCCATAAATGTTGCCCACATCTTTGTTCCATCGGCTTGATTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp TTTAAATCAAGCCGATGGAACAAAGATGTGGGCAACATTTATGGCATAAATCCACTGCACTGGGCTCCCTaGTGTCCACCAGTTCATGTA +
Preference number: 4 (lower is better)
Translates to: FKSSRWNKDVGNIYGINPLHWAP*CPPVHV
Trigger: TACATGAACTGGTGGACATCAGGGAGCCCAGTGCAG...TGGATTTATGCCATAAATGTTGCCCACATCTTTGTTCCATCGGCTTGATTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp GTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACACATTTTCGGCTCCTGAAATaGCTGGCTCTGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VCTIDKTIQTSYDLLATHFRLLK*LALVLQ
Trigger: CTGCAGAACCAGAGCCAGTCATTTCAGGAGCCGAAA...ATGTGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTACTATTTCGGCTCCTaGAATGACTGGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDYYFGS*NDWLWF
Trigger: GAACCAGAGCCAGTCATTTCAGGAGCCGAAATAGTA...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp AAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGGAGAGATTCAAACTCTATTTCAAACTTGTGCTaGGTCTCTGCCTCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: KEVPGSSLGQSSGRDSNSISNLC*VSASKG
Trigger: TCCTTTAGAGGCAGAGACTCAGCACAAGTTTGAAAT...AGAGTTTGAATCTCTCCCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp AAAATGAGGACATGGCAAAGAAGTACCAGGATCCTCTCTAGGTCAGAGTTCCGGCTCTCCATACAAGCATaGTGGCTTTCTTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: KMRTWQRSTRILSRSEFRLSIQA*WLSSKF
Trigger: AAATTTGGAAGAAAGCCATCATGCTTGTATGGAGAG...CCGGAACTCTGACCTAGAGAGGATCCTGGTACTTCTTTGCCATGTCCTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254900.10
CDS-3UTR TCA 90 bp TCTGCCAGTGTGTGTGACTGCAGTGTAGCATTGTGTATGCTGAAGCCATCATCACTCTCCATACAAGCATaGTGGCTTTCTTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: SASVCDCSVALCMLKPSSLSIQA*WLSSKF
Trigger: AAATTTGGAAGAAAGCCATCATGCTTGTATGGAGAG...TGATGATGGCTTCAGCATACACAATGCTACACTGCAGTCACACACACTGGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506167.5
ENST00000512140.5
CDS-3UTR TCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATAGCATAATGTCACGCTaGAATTCAGCTGTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDSIMSR*NSAVLR
Trigger: CCGAAGCACAGCTGAATTTCAGCGTGACATTATGCT...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR TCA 90 bp GTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACACATGACACTGTCCTTCTCTaGAGCATCCTGTTTGCGGGT +
Preference number: 4 (lower is better)
Translates to: VCTIDKTIQTSYDLLATHDTVLL*SILFAG
Trigger: ACCCGCAAACAGGATGCTTCAGAGAAGGACAGTGTC...ATGTGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000472478.6
ENST00000512140.5
CDS-3UTR TCA 90 bp AAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTCTGACACAGTTGTCGGGTTaGCTCACTGATGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KLYLVYFYFRFGSKRVTLTQLSG*LTDAAG
Trigger: CCCTGCTGCATCAGTGAGTCAACCCGACAACTGTGT...CAGAGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
CDS-3UTR TCA 90 bp CCCAAGCTCTATCTTGTTTACTTTTATTTTAGGTTCGGCTCAAAGAGGGTAACTTCCTCCATCCTTCTCTaGAGCATCCTGTTTGCGGGT +
Preference number: 4 (lower is better)
Translates to: PKLYLVYFYFRFGSKRVTSSILL*SILFAG
Trigger: ACCCGCAAACAGGATGCTTCAGAGAAGGATGGAGGA...AGTTACCCTCTTTGAGCCGAACCTAAAATAAAAGTAAACAAGATAGAGCTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR TCA 90 bp GTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACACATTCCTCCATCCTTCTCTaGAGCATCCTGTTTGCGGGT +
Preference number: 4 (lower is better)
Translates to: VCTIDKTIQTSYDLLATHSSILL*SILFAG
Trigger: ACCCGCAAACAGGATGCTTCAGAGAAGGATGGAGGA...ATGTGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
CDS-3UTR GCA 90 bp TCAACTCGCTCAGCAGTCAATTTCCGAACAATAACATCTTCAACAGTTTCCACCAAAGCTCATCCAGTCTaGTGTCCATGTGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: STRSAVNFRTITSSTVSTKAHPV*CPCVQL
Trigger: AAGCTGGACACATGGACAGCAGACTGGATGAGCTTT...GGTGGAAACTGTTGAAGATGTTATTGTTCGGAAATTGACTGCTGAGCGAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000428808.5
ENST00000432618.5
ENST00000450756.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCAGCTACAGTATTGGGTGTTTaGTGTATCTCCCCACCATGT +
Preference number: 4 (lower is better)
Translates to: ALKQAIVLLQLSKRDFPATVLGV*CISPPC
Trigger: ACATGGTGGGGAGATACAGCAAACACCCAATACTGT...AGCTGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp GTCTGTACAATTGACAAGACAATACAAACTAGCTACGATCTGCTAGCTACACATTGCAGCAGGGGAGGCTaGAACAGTATTGGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: VCTIDKTIQTSYDLLATHCSRGG*NSIGCL
Trigger: CAAACACCCAATACTGTTGCAGCCTCCCCTGCTGCA...ATGTGTAGCTAGCAGATCGTAGCTAGTTTGTATTGTCTTGTCAATTGTACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TTCTTCAACTCGCTCAGCAGTCAATTTCCGAACAATAACATCTTCAACAGTTTCGACTGGCTCTGGTTCTaGAGGTTCCACCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: FFNSLSSQFPNNNIFNSFDWLWF*RFHLDL
Trigger: GAGATCAAGGTGGAACCTGCAGAACCAGAGCCAGTC...GAAACTGTTGAAGATGTTATTGTTCGGAAATTGACTGCTGAGCGAGTTGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512140.5
CDS-3UTR GCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATAACAATCTCTCCAGCTaGAGTACTTCCCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDNNLSS*STSQFL
Trigger: GAGGAACTGGGAAGTACTGCAGCTGGAGAGATTGTT...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp TCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATTTTCCACCCAATGGCAACATCTaGTTCAACAATCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SALKQAIVLLQLSKRDFPPNGNI*FNNLSS
Trigger: GCTGGAGAGATTGTTGAAGCAGATGTTGCCATTGGG...TGGAAAATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ATGGTTTCTGCCCTAAAACAGGCAATTGTGCTACTCCAACTCTCTAAGAGAGATGCCAGTGTGTGTGACTaGAGTGTAGCATTGTGTATG +
Preference number: 4 (lower is better)
Translates to: MVSALKQAIVLLQLSKRDASVCD*SVALCM
Trigger: CATACACAATGCTACACTGCAGTCACACACACTGGC...ATCTCTCTTAGAGAGTTGGAGTAGCACAATTGCCTGTTTTAGGGCAGAAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230901.9
ENST00000402931.5
ENST00000411594.6
ENST00000418329.5
ENST00000441656.5
ENST00000454473.5
ENST00000512140.5
CDS-3UTR GCA 90 bp ATACCTATGATTAGCTGCAGCTCTCCATACAAGCATGATGGCTTTCTTCCAAATGCTGTGGTAGCCAGGT