RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRD7 (Homo sapiens)

Ensembl gene IDs: ENSG00000166164

Ensembl transcript IDs: ENST00000394688.8, ENST00000401491.7, ENST00000562383.6, ENST00000569774.6

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTCCTTCCGCCTCCGCGTCGGTGAGCCCGGGTGATGGAGCGGGGTaGGGAGCCCCTGCCTCTAGGCCAGTCCACCCAGTCTGTGTGGCA +
Preference number: 1 (lower is better)
Translates to: TPSASASVSPGDGAG*GAPASRPVHPVCVA
Trigger: TGCCACACAGACTGGGTGGACTGGCCTAGAGGCAGGGGCTCCCCACCCCGCTCCATCACCCGGGCTCACCGACGCGGAGGCGGAAGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR TCA 90 bp GTGTGCGAGAGGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTaGGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTGGCGGCTGC +
Preference number: 1 (lower is better)
Translates to: VCERRRWVEGTPHPS*EAGAAWLRLWSGGC
Trigger: GCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCCTCTCGCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 90 bp TGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTGGCTaGGGCTATGGAGTGGCGGCTGCTTCACCGCTTCCTTCTTGCCTG +
Preference number: 1 (lower is better)
Translates to: WREPHTLPEKQGQPG*GYGVAAASPLPSCL
Trigger: CAGGCAAGAAGGAAGCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CCA 90 bp GCCGCCAAGGGCCATGTCCTCACCATGCTTAGTCATGCGCTCAGCTaGCAGGGCAGCCATGAGACGTGTGTGCGAGAGGCGGCGATGGGT +
Preference number: 1 (lower is better)
Translates to: AAKGHVLTMLSHALS*QGSHETCVREAAMG
Trigger: ACCCATCGCCGCCTCTCGCACACACGTCTCATGGCTGCCCTGCCAGCTGAGCGCATGACTAAGCATGGTGAGGACATGGCCCTTGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 90 bp AGACAACAGGAAGAGCAGGAGCCGCCAAGGGCCATGTCCTCACCATaGTTAGTCATGCGCTCAGCTGGCAGGGCAGCCATGAGACGTGTG +
Preference number: 1 (lower is better)
Translates to: RQQEEQEPPRAMSSP*LVMRSAGRAAMRRV
Trigger: CACACGTCTCATGGCTGCCCTGCCAGCTGAGCGCATGACTAAGCATGGTGAGGACATGGCCCTTGGCGGCTCCTGCTCTTCCTGTTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 90 bp GCGGGGGTGGCGGTGGAGGGAACGAAAATTGAACCTGTCTGCCTGTaGTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTAT +
Preference number: 1 (lower is better)
Translates to: AGVAVEGTKIEPVCL*CVVWLYQPEEGQVY
Trigger: ATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGTTCAATTTTCGTTCCCTCCACCGCCACCCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR GCA 90 bp CTAAGTGCGGGGGTGGCGGTGGAGGGAACGAAAATTGAACCTGTCTaGCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAG +
Preference number: 1 (lower is better)
Translates to: LSAGVAVEGTKIEPV*LCCVVWLYQPEEGQ
Trigger: CTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGTTCAATTTTCGTTCCCTCCACCGCCACCCCCGCACTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR GCA 90 bp CAAGCCCAGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGGCATaGAGATGGCTGTGCATGTTGGCTTCTTTGGACCTGCACTGGAGG +
Preference number: 1 (lower is better)
Translates to: QAQEKTLRPTPIPKA*RWLCMLASLDLHWR
Trigger: CCTCCAGTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTCTCCTGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 90 bp GCAGATTGGGTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTaGCCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGC +
Preference number: 1 (lower is better)
Translates to: ADWVTDQTCWGPGMS*PGLQIKSTAKCGGG
Trigger: GCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 90 bp GGATTTCTCAGACACATGCACCAGATTCTGGCTCGAAGCAGCCACTaGGCCATAATGCGCAGGGGAGGCCAGAAGCTCTGTGCCTGGTCT +
Preference number: 1 (lower is better)
Translates to: GFLRHMHQILARSSH*AIMRRGGQKLCAWS
Trigger: AGACCAGGCACAGAGCTTCTGGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGGTGCATGTGTCTGAGAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR TCA 90 bp AAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAACGAAAATTaGACCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGA +
Preference number: 1 (lower is better)
Translates to: KSTAKCGGGGGGNEN*TCLPVLCRVALSAR
Trigger: TCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGTTCAATTTTCGTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 90 bp ATGCAGAGGCTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTaGGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGGCAAATGCAA +
Preference number: 1 (lower is better)
Translates to: MQRLLDLGSPPPHKC*AVLALKLRESRQMQ
Trigger: TTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 90 bp GGAAGGCAGACTGCATGCCTGGGCAGTCTCTATCTGTCCCTACCATaGCAGGTGTTCTTCCCGCCTCTGAAGACAACAGGTCTCTCTTCC +
Preference number: 1 (lower is better)
Translates to: GRQTACLGSLYLSLP*QVFFPPLKTTGLSS
Trigger: GGAAGAGAGACCTGTTGTCTTCAGAGGCGGGAAGAACACCTGTCATGGTAGGGACAGATAGAGACTGCCCAGGCATGCAGTCTGCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 90 bp ACTATACTGAAATCTGTGCTCTCAAGATCTAGCAGTGACCAGGGCTaGCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGTTTCTGTTGC +
Preference number: 1 (lower is better)
Translates to: TILKSVLSRSSSDQG*PAGALLASQEGFCC
Trigger: GCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTCACTGCTAGATCTTGAGAGCACAGATTTCAGTATAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR CCA 90 bp TCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTaGCTTCTTTGGACCTGCACTGGAGGATTTCTCAGACACATGCAC +
Preference number: 1 (lower is better)
Translates to: SAPRQSQRHADGCAC*LLWTCTGGFLRHMH
Trigger: GTGCATGTGTCTGAGAAATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CCA 90 bp CAGGAGAAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATaGCTGTGCATGTTGGCTTCTTTGGACCTGCACTGGAGGATTTCT +
Preference number: 1 (lower is better)
Translates to: QEKTLRPTPIPKACR*LCMLASLDLHWRIS
Trigger: AGAAATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR TCA 90 bp AATGTGGTCACAGCAAGAAGGCGGGGAGCAGCAGAGCCTTGCCTTTaGATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTT +
Preference number: 1 (lower is better)
Translates to: NVVTARRRGAAEPCL*MRQLVRQAFWREVL
Trigger: AAGCACCTCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCAAAGGCAAGGCTCTGCTGCTCCCCGCCTTCTTGCTGTGACCACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR GCA 90 bp AAGACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTaGATGTTGGCTTCTTTGGACCTGCACTGGAGGATTTCTCAGACA +
Preference number: 1 (lower is better)
Translates to: KTLRPTPIPKACRWL*MLASLDLHWRISQT
Trigger: TGTCTGAGAAATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CCA 90 bp ATGGTTCTAGCTATCACACTCTCCAGGGAAGGCAGACTGCATGCCTaGGCAGTCTCTATCTGTCCCTACCATGACAGGTGTTCTTCCCGC +
Preference number: 1 (lower is better)
Translates to: MVLAITLSREGRLHA*AVSICPYHDRCSSR
Trigger: GCGGGAAGAACACCTGTCATGGTAGGGACAGATAGAGACTGCCCAGGCATGCAGTCTGCCTTCCCTGGAGAGTGTGATAGCTAGAACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR TCA 90 bp AGGAGCCTTTACAAGATGATTATACAGGGTTGCAGATTGGGTGACTaGCCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGCTGCA +
Preference number: 1 (lower is better)
Translates to: RSLYKMIIQGCRLGD*PDLLGSWDELPRAA
Trigger: TGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTATAATCATCTTGTAAAGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 90 bp AGCGTCGCCTCAGGGCACGAGAACCAGGTACTCAAGCCCAAGAGGTaGAATTCAGCTGACTGTCCTCACTTAAAGGTGACCTGTCACCTT +
Preference number: 1 (lower is better)
Translates to: SVASGHENQVLKPKR*NSADCPHLKVTCHL
Trigger: AAGGTGACAGGTCACCTTTAAGTGAGGACAGTCAGCTGAATTTCACCTCTTGGGCTTGAGTACCTGGTTCTCGTGCCCTGAGGCGACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 90 bp GAGCCCCTGCCTCTAGGCCAGTCCACCCAGTCTGTGTGGCACAGCTaGACCTCGCCATCTATTATGAAAGGTTTTAGAAATCCCTCTGAT +
Preference number: 1 (lower is better)
Translates to: EPLPLGQSTQSVWHS*TSPSIMKGFRNPSD
Trigger: ATCAGAGGGATTTCTAAAACCTTTCATAATAGATGGCGAGGTGCAGCTGTGCCACACAGACTGGGTGGACTGGCCTAGAGGCAGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR TCA 90 bp GCAGTCTCTATCTGTCCCTACCATGACAGGTGTTCTTCCCGCCTCTaGAGACAACAGGTCTCTCTTCCTTTTCAGGTTACCGAGGAGACC +
Preference number: 1 (lower is better)
Translates to: AVSICPYHDRCSSRL*RQQVSLPFQVTEET
Trigger: GGTCTCCTCGGTAACCTGAAAAGGAAGAGAGACCTGTTGTCTTCAGAGGCGGGAAGAACACCTGTCATGGTAGGGACAGATAGAGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 90 bp TCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCTAATTTaGACAAAGGTGCTGGGTAGACTAGTGGCAGCTCTCATGTGCTGC +
Preference number: 1 (lower is better)
Translates to: SCGFISPRKGRCILI*TKVLGRLVAALMCC
Trigger: GCAGCACATGAGAGCTGCCACTAGTCTACCCAGCACCTTTGTGCAAATTAGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR GCA 90 bp TCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTTGGACCTaGACTGGAGGATTTCTCAGACACATGCACCAGATTCTGGCTCGA +
Preference number: 1 (lower is better)
Translates to: SQRHADGCACWLLWT*TGGFLRHMHQILAR
Trigger: TCGAGCCAGAATCTGGTGCATGTGTCTGAGAAATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CCA 90 bp AAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTTGGACCTGCACTaGAGGATTTCTCAGACACATGCACCAGATTCTGGCTCGAAGCAG +
Preference number: 1 (lower is better)
Translates to: KACRWLCMLASLDLH*RISQTHAPDSGSKQ
Trigger: CTGCTTCGAGCCAGAATCTGGTGCATGTGTCTGAGAAATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CCA 90 bp CGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTTaGACCTGCACTGGAGGATTTCTCAGACACATGCACCAGATTCTG +
Preference number: 1 (lower is better)
Translates to: RQSQRHADGCACWLL*TCTGGFLRHMHQIL
Trigger: CAGAATCTGGTGCATGTGTCTGAGAAATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CCA 90 bp GTGGAGGGAACGAAAATTGAACCTGTCTGCCTGTGCTGTGTCGTGTaGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCTAATTTGCAC +
Preference number: 1 (lower is better)
Translates to: VEGTKIEPVCLCCVV*LYQPEEGQVYSNLH
Trigger: GTGCAAATTAGAATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGTTCAATTTTCGTTCCCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 90 bp GAGAGAGGTGCTTTGAAAGTAAGGTGCGGCCTTTCACCTCTTCCTTaGTTACTCACACATCTTTGCGTTCTCCCCTGCCGTCCTTCAACT +
Preference number: 1 (lower is better)
Translates to: ERGALKVRCGLSPLP*LLTHLCVLPCRPST
Trigger: AGTTGAAGGACGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCGCACCTTACTTTCAAAGCACCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR GCA 90 bp GGTATGGATTCTCTGGCCTCCTCTAAGGGCAGAAGCTTGAGGCTTTaGCTGCACGCTTGGGTAACTGTAAACATCATCTTCAGGCATAAA +
Preference number: 1 (lower is better)
Translates to: GMDSLASSKGRSLRL*LHAWVTVNIIFRHK
Trigger: TTTATGCCTGAAGATGATGTTTACAGTTACCCAAGCGTGCAGGCAAAGCCTCAAGCTTCTGCCCTTAGAGGAGGCCAGAGAATCCATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR TCA 90 bp TCCTGTCTGTGGGACATAAGGAAGAAGCATTGGAAGGCACTATTTTaGAAGAATGCTGCACAGGTATGGCAACAGCCCCAAGCACATTCC +
Preference number: 1 (lower is better)
Translates to: SCLWDIRKKHWKALF*KNAAQVWQQPQAHS
Trigger: GGAATGTGCTTGGGGCTGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGTGCCTTCCAATGCTTCTTCCTTATGTCCCACAGACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 90 bp GAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTCCCTaGGGTGCCAGGCAGGCAACTTTAGCACATGATGAAAACAGACTT +
Preference number: 1 (lower is better)
Translates to: ENVHWFGADFEIFVP*GARQATLAHDENRL
Trigger: AAGTCTGTTTTCATCATGTGCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 90 bp GGACATAAGGAAGAAGCATTGGAAGGCACTATTTTGAAAGAATGCTaGACAGGTATGGCAACAGCCCCAAGCACATTCCTTCCTCACGAG +
Preference number: 1 (lower is better)
Translates to: GHKEEALEGTILKEC*TGMATAPSTFLPHE
Trigger: CTCGTGAGGAAGGAATGTGCTTGGGGCTGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGTGCCTTCCAATGCTTCTTCCTTATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR GCA 90 bp GTGGGACATAAGGAAGAAGCATTGGAAGGCACTATTTTGAAAGAATaGTGCACAGGTATGGCAACAGCCCCAAGCACATTCCTTCCTCAC +
Preference number: 1 (lower is better)
Translates to: VGHKEEALEGTILKE*CTGMATAPSTFLPH
Trigger: GTGAGGAAGGAATGTGCTTGGGGCTGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGTGCCTTCCAATGCTTCTTCCTTATGTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 90 bp CGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCTTTACAAGATaGTTATACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTGG +
Preference number: 1 (lower is better)
Translates to: RKVLHKVLHTGAFTR*LYRVADWVTDQTCW
Trigger: CCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTATAATCATCTTGTAAAGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 90 bp ACCAGAAAGGAATGGAGTCTGTTTAGAGACAACTTGGACAACCTGTaGGTGCATCTCTTCTTTCCTTTAGTCTTCACAGCTAACTCTGGA +
Preference number: 1 (lower is better)
Translates to: TRKEWSLFRDNLDNL*VHLFFPLVFTANSG
Trigger: TCCAGAGTTAGCTGTGAAGACTAAAGGAAAGAAGAGATGCACTCACAGGTTGTCCAAGTTGTCTCTAAACAGACTCCATTCCTTTCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR TCA 90 bp GGGGAGCCCCTGCCTCTAGGCCAGTCCACCCAGTCTGTGTGGCACAGCTGCACCGCTCGAAGCAGCCACTaGGCCATAATGCGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: GEPLPLGQSTQSVWHSCTARSSH*AIMRRG
Trigger: TCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGC...GGTGCAGCTGTGCCACACAGACTGGGTGGACTGGCCTAGAGGCAGGGGCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR GCA 90 bp CCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAACGAGCAGTGACCAGGGCTaGCCGGCGGGGGCTCTCCTG +
Preference number: 2 (lower is better)
Translates to: PGCKLRVQLSAGVAVEGTSSDQG*PAGALL
Trigger: CAGGAGAGCCCCCGCCGGGCAGCCCTGGTCACTGCT...CGTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR GCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTCCAGGGAAGGCAGACTaGATGCCTGGGCAGTCTCTA +
Preference number: 2 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPPGKAD*MPGQSL
Trigger: TAGAGACTGCCCAGGCATGCAGTCTGCCTTCCCTGG...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR GCA 90 bp GGGGAGCCCCTGCCTCTAGGCCAGTCCACCCAGTCTGTGTGGCACAGCTGCACCTACCCCAAGCCCGACTaGAACGCAGTGACTCTGGGA +
Preference number: 2 (lower is better)
Translates to: GEPLPLGQSTQSVWHSCTYPKPD*NAVTLG
Trigger: TCCCAGAGTCACTGCGTTGCAGTCGGGCTTGGGGTA...GGTGCAGCTGTGCCACACAGACTGGGTGGACTGGCCTAGAGGCAGGGGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR GCA 90 bp CTGAGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTGGCGGCTGCTTCACCGCTGGGGGCTCTGGAGATaGAAGGATCTGACCCACAGC +
Preference number: 2 (lower is better)
Translates to: LRSRGSLAAAMEWRLLHRWGLWR*KDLTHS
Trigger: GCTGTGGGTCAGATCCTTGCATCTCCAGAGCCCCCA...GCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp GGGGAGCCCCTGCCTCTAGGCCAGTCCACCCAGTCTGTGTGGCACAGCTGCACCCTAAGGGCAGAAGCTTaGGGCTTTGCCTGCACGCTT +
Preference number: 2 (lower is better)
Translates to: GEPLPLGQSTQSVWHSCTLRAEA*GFACTL
Trigger: AAGCGTGCAGGCAAAGCCTCAAGCTTCTGCCCTTAG...GGTGCAGCTGTGCCACACAGACTGGGTGGACTGGCCTAGAGGCAGGGGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR GCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTTGTCTGTACGGACACTaGCAAGTTTCAGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPCLYGH*QVSGAG
Trigger: CCCAGCCCCTGAAACTTGGCAGTGTCCGTACAGACA...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR GCA 90 bp AGAGCTGGCCGGGGAATGCCCTCCTCATACCCCAAGCCCGACTGCAACGCAGTGGTTACCGAGGAGACCTaGACCATCCTCCAGGGCCTC +
Preference number: 2 (lower is better)
Translates to: RAGRGMPSSYPKPDCNAVVTEET*TILQGL
Trigger: GAGGCCCTGGAGGATGGTGCAGGTCTCCTCGGTAAC...CACTGCGTTGCAGTCGGGCTTGGGGTATGAGGAGGGCATTCCCCGGCCAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR GCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTTGTCCCCGCATCCTGTaGTGGGGTATGGATTCTCTG +
Preference number: 2 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPCPRIL*WGMDSL
Trigger: CAGAGAATCCATACCCCAGCACAGGATGCGGGGACA...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp AGAGCTGGCCGGGGAATGCCCTCCTCATACCCCAAGCCCGACTGCAACGCAGTGCACCTCAGTGGCCTGTaGGCACGCACAAGTGAGGTC +
Preference number: 2 (lower is better)
Translates to: RAGRGMPSSYPKPDCNAVHLSGL*ARTSEV
Trigger: GACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTG...CACTGCGTTGCAGTCGGGCTTGGGGTATGAGGAGGGCATTCCCCGGCCAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp GGGGAGCCCCTGCCTCTAGGCCAGTCCACCCAGTCTGTGTGGCACAGCTGCACCAGTCTGAAAAAGAGCTaGCCGGGGAATGCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: GEPLPLGQSTQSVWHSCTSLKKS*PGNALL
Trigger: GAGGAGGGCATTCCCCGGCCAGCTCTTTTTCAGACT...GGTGCAGCTGTGCCACACAGACTGGGTGGACTGGCCTAGAGGCAGGGGCTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CAA 90 bp GCCTGGCTGCGGCTATGGAGTGGCGGCTGCTTCACCGCTTCCTTCTaGCCTGCAGCTCCTACTGAAGCCCAAGTTCAGCGGCGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: AWLRLWSGGCFTASF*PAAPTEAQVQRRGE
Trigger: TTCTCCACGCCGCTGAACTTGGGCTTCAGTAGGAGCTGCAGGCAAGAAGGAAGCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTGTGAATGCCGTGGCCTaGTCAACGTCAAAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPVNAVA*STSKAK
Trigger: CTTTGCCTTTGACGTTGATCAGGCCACGGCATTCAC...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp CTGAGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTGGCGGCTGCTTCACCGCTATCTGTCCCTACCATaGCAGGTGTTCTTCCCGCCT +
Preference number: 2 (lower is better)
Translates to: LRSRGSLAAAMEWRLLHRYLSLP*QVFFPP
Trigger: AGGCGGGAAGAACACCTGTCATGGTAGGGACAGATA...GCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR GCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTGGGTACTCTTGTGAATaGCGTGGCCTGATCAACGTC +
Preference number: 2 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPGYSCE*RGLINV
Trigger: GACGTTGATCAGGCCACGGCATTCACAAGAGTACCC...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR GCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTTCACCGCTTCCTTCTTaGCTGCAGCTCCTACTGAAG +
Preference number: 2 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPSPLPS*LQLLLK
Trigger: CTTCAGTAGGAGCTGCAGGCAAGAAGGAAGCGGTGA...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp GGGGAGCCCCTGCCTCTAGGCCAGTCCACCCAGTCTGTGTGGCACAGCTGCACCACATGCACCAGATTCTaGCTCGAAGCAGCCACTGAG +
Preference number: 2 (lower is better)
Translates to: GEPLPLGQSTQSVWHSCTTCTRF*LEAATE
Trigger: CTCAGTGGCTGCTTCGAGCCAGAATCTGGTGCATGT...GGTGCAGCTGTGCCACACAGACTGGGTGGACTGGCCTAGAGGCAGGGGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTGGGGTATGGATTCTCTaGCCTCCTCTAAGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPGVWIL*PPLRAE
Trigger: TTCTGCCCTTAGAGGAGGCCAGAGAATCCATACCCC...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp CCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAGTTGGGGTCCTGGGATaGGTTGCCCCGGGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: PGSGKPAPSQMLSRSCSEVGVLG*VAPGCK
Trigger: TTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAAC...TTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR TCA 90 bp AGAGCTGGCCGGGGAATGCCCTCCTCATACCCCAAGCCCGACTGCAACGCAGTGCCTCGGGTACTCTTGTaGATGCCGTGGCCTGATCAA +
Preference number: 2 (lower is better)
Translates to: RAGRGMPSSYPKPDCNAVPRVLL*MPWPDQ
Trigger: TTGATCAGGCCACGGCATTCACAAGAGTACCCGAGG...CACTGCGTTGCAGTCGGGCTTGGGGTATGAGGAGGGCATTCCCCGGCCAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp CTGAGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTGGCGGCTGCTTCACCGCCTCAAGCCCAAGAGGTaGAATTCAGCTGACTGTCCT +
Preference number: 2 (lower is better)
Translates to: LRSRGSLAAAMEWRLLHRLKPKR*NSADCP
Trigger: AGGACAGTCAGCTGAATTTCACCTCTTGGGCTTGAG...GCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR GCA 90 bp TGCCCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGGGGGTGGGTGGGAGGTaGCTAATTACCCATACAAGG +
Preference number: 2 (lower is better)
Translates to: CPGLQIKSTAKCGGGGGGGVGGR*LITHTR
Trigger: CCTTGTATGGGTAATTAGGCACCTCCCACCCACCCC...CCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGCA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CCA 90 bp GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCACGGCGGGGGCTCTCCTaGCAAGTCAGGAAGGTTTCT +
Preference number: 2 (lower is better)
Translates to: GCGDRVLRNVVTARRRGARRGLS*QVRKVS
Trigger: AGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCG...TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CCA 90 bp CCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAGACTTGTTGGGGTCCTaGGATGAGTTGCCCCGGGCT +
Preference number: 2 (lower is better)
Translates to: PGSGKPAPSQMLSRSCSEDLLGS*DELPRA
Trigger: AGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTC...TTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR GCA 90 bp CTGAGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTGGCGGCTGCTTCACCGCGATTTCTCAGACACATaGACCAGATTCTGGCTCGAA +
Preference number: 2 (lower is better)
Translates to: LRSRGSLAAAMEWRLLHRDFSDT*TRFWLE
Trigger: TTCGAGCCAGAATCTGGTGCATGTGTCTGAGAAATC...GCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCAGTGCGGGGGTGGCGGTaGAGGGAACGAAAATTGAAC +
Preference number: 2 (lower is better)
Translates to: GCGDRVLRNVVTARRRGAVRGWR*RERKLN
Trigger: GTTCAATTTTCGTTCCCTCCACCGCCACCCCCGCAC...TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CCA 90 bp AGAGCTGGCCGGGGAATGCCCTCCTCATACCCCAAGCCCGACTGCAACGCAGTGCCAAAGGCATGCAGATaGCTGTGCATGTTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: RAGRGMPSSYPKPDCNAVPKACR*LCMLAS
Trigger: AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGG...CACTGCGTTGCAGTCGGGCTTGGGGTATGAGGAGGGCATTCCCCGGCCAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp GTCACCTTACTTAAAGGGTGTGCCCTTATCTCGTCCTGGGGGAGGGGCACAGGTCCCCGCATCCTGTGCTaGGGTATGGATTCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: VTLLKGCALISSWGRGTGPRILC*GMDSLA
Trigger: GGCCAGAGAATCCATACCCCAGCACAGGATGCGGGG...ACCTGTGCCCCTCCCCCAGGACGAGATAAGGGCACACCCTTTAAGTAAGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp CATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCAGACACAGATGGAAGGGAGTCGGTGAGCCCGGGTaGTGGAGCGGGGTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: HSCVDNAVFALCRHRWKGVGEPG*WSGVGS
Trigger: GCTCCCCACCCCGCTCCATCACCCGGGCTCACCGAC...TCCCTTCCATCTGTGTCTGCACAGAGCAAACACAGCATTATCTACACAGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR GCA 90 bp GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCAGGTCCTGGGATGAGTTaGCCCGGGCTGCAAATTAAG +
Preference number: 2 (lower is better)
Translates to: GCGDRVLRNVVTARRRGAGPGMS*PGLQIK
Trigger: CTTAATTTGCAGCCCGGGGCAACTCATCCCAGGACC...TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CCA 90 bp TCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTGGGCATCATTCCCACTaGGTATGCAGGGGCAGAACC +
Preference number: 2 (lower is better)
Translates to: SACAVSCGFISPRKGRCIGHHSH*VCRGRT
Trigger: GGTTCTGCCCCTGCATACCCAGTGGGAATGATGCCC...AATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR CAA 90 bp CCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCAGCAGAGCCTaGCCTTTGAATGAGGCAGCTTGTGAGGCAAGCATTCTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: PEECGHSKKAGSSRA*PLNEAACEASILER
Trigger: TCTCTCCAGAATGCTTGCCTCACAAGCTGCCTCATTCAAAGGCAAGGCTCTGCTGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR CAA 90 bp CTCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTaGGCTTCTTTGGACCTGCACTGGAGGATTTCTCAGACACATGCA +
Preference number: 2 (lower is better)
Translates to: LRPTPIPKACRWLCM*ASLDLHWRISQTHA
Trigger: TGCATGTGTCTGAGAAATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CAA 90 bp AACGCAGTGACTCTGGGAAGCAACCCAGCCTTCACTCTAGTTGTTTaGTCCCCGCATCCTGTGCTGGGGTATGGATTCTCTGGCCTCCTC +
Preference number: 2 (lower is better)
Translates to: NAVTLGSNPAFTLVV*SPHPVLGYGFSGLL
Trigger: GAGGAGGCCAGAGAATCCATACCCCAGCACAGGATGCGGGGACAAAACAACTAGAGTGAAGGCTGGGTTGCTTCCCAGAGTCACTGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp CCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAATGCTGCACAGGTATaGCAACAGCCCCAAGCACAT +
Preference number: 2 (lower is better)
Translates to: PGSGKPAPSQMLSRSCSENAAQV*QQPQAH
Trigger: ATGTGCTTGGGGCTGTTGCCATACCTGTGCAGCATT...TTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CCA 90 bp CATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCAGACACAGATGGAAGGGAGGTGATGGAGCGGGGTaGGGAGCCCCTGCCTCTAGG +
Preference number: 2 (lower is better)
Translates to: HSCVDNAVFALCRHRWKGGDGAG*GAPASR
Trigger: CCTAGAGGCAGGGGCTCCCCACCCCGCTCCATCACC...TCCCTTCCATCTGTGTCTGCACAGAGCAAACACAGCATTATCTACACAGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp CGGCCTTTCACCTCTTCCTTGATTACTCACACATCTTTGCGTTCTCCCCTGCCGGGGTTGCAGATTGGGTaGCTGACCAGACTTGTTGGG +
Preference number: 2 (lower is better)
Translates to: RPFTSSLITHTSLRSPLPGLQIG*LTRLVG
Trigger: CCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCC...CGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR TCA 90 bp GAGGACTTACTTTGTCTGTACGGACACTGCCAAGTTTCAGGGGCTGGGGCTGAAGAGATCTTTGTTCCCTaGGGTGCCAGGCAGGCAACT +
Preference number: 2 (lower is better)
Translates to: EDLLCLYGHCQVSGAGAEEIFVP*GARQAT
Trigger: AGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCTC...TTCAGCCCCAGCCCCTGAAACTTGGCAGTGTCCGTACAGACAAAGTAAGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp CATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCAGACACAGATGGAAGGGATTCAGGGGCTGGGGCTaGACTGAGGGCTCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: HSCVDNAVFALCRHRWKGFRGWG*TEGSCW
Trigger: CCAGCAGGAGCCCTCAGTTCAGCCCCAGCCCCTGAA...TCCCTTCCATCTGTGTCTGCACAGAGCAAACACAGCATTATCTACACAGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp GTTAACATCAAACCCAGACTTCTGAGTCTGAAAAAGAGCTGGCCGGGGAATGCCCCGACTGCAACGCAGTaGCTCTGGGAAGCAACCCAG +
Preference number: 2 (lower is better)
Translates to: VNIKPRLLSLKKSWPGNAPTATQ*LWEATQ
Trigger: CTGGGTTGCTTCCCAGAGTCACTGCGTTGCAGTCGG...GGCATTCCCCGGCCAGCTCTTTTTCAGACTCAGAAGTCTGGGTTTGATGTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR GCA 90 bp CGGCCTTTCACCTCTTCCTTGATTACTCACACATCTTTGCGTTCTCCCCTGCCGTCTACTCCGCATGGGTaGATGCAGAGGCTCCTGGAT +
Preference number: 2 (lower is better)
Translates to: RPFTSSLITHTSLRSPLPSTPHG*MQRLLD
Trigger: ATCCAGGAGCCTCTGCATGCACCCATGCGGAGTAGA...CGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR GCA 90 bp GTCACCTTACTTAAAGGGTGTGCCCTTATCTCGTCCTGGGGGAGGGGCACAGGTGCATGCAGATGGCTGTaGATGTTGGCTTCTTTGGAC +
Preference number: 2 (lower is better)
Translates to: VTLLKGCALISSWGRGTGACRWL*MLASLD
Trigger: GTCCAAAGAAGCCAACATGCACAGCCATCTGCATGC...ACCTGTGCCCCTCCCCCAGGACGAGATAAGGGCACACCCTTTAAGTAAGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp ACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACACCAAGCTGTCTAGCACGGATTaGAGACTCCCTCTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: TSVACGHAQVRSVFLDTKLSSTD*RLPLPG
Trigger: ACCAGGGAGAGGGAGTCTCCAATCCGTGCTAGACAG...CTTGGTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp CATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCAGACACAGATGGAAGGGATGCGAGAGGCGGCGATaGGTGGAGGGAACCCCACAC +
Preference number: 2 (lower is better)
Translates to: HSCVDNAVFALCRHRWKGCERRR*VEGTPH
Trigger: GTGTGGGGTTCCCTCCACCCATCGCCGCCTCTCGCA...TCCCTTCCATCTGTGTCTGCACAGAGCAAACACAGCATTATCTACACAGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp CTGGAGAGCTTCAAAACTAGAAGGATCTACTCCGCATGGGTGCATGCAGAGGCTGAGCCGTTCTTGCTCTaGAACTGCGTGAGTCAAGGC +
Preference number: 2 (lower is better)
Translates to: LESFKTRRIYSAWVHAEAEPFLL*NCVSQG
Trigger: GCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTC...AGCCTCTGCATGCACCCATGCGGAGTAGATCCTTCTAGTTTTGAAGCTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR GCA 90 bp GAGCTGCTGTCTCACCCAGCAGCCATGGTTCTAGCTATCACACTCTCCAGGGAACCAATCCCAAAGGCATaGAGATGGCTGTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: ELLSHPAAMVLAITLSREPIPKA*RWLCML
Trigger: CAACATGCACAGCCATCTGCATGCCTTTGGGATTGG...TTCCCTGGAGAGTGTGATAGCTAGAACCATGGCTGCTGGGTGAGACAGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp CTTATGGGGTCAGCTGGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAACACATTAGTGCACTaGGCCTCTCTGAGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: LMGSAGCGDRVLRNVVTANTLVH*ASLRSA
Trigger: TGCTGACCTCAGAGAGGCCCAGTGCACTAATGTGTT...TGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCAGCTGACCCCATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CCA 90 bp GTTAACATCAAACCCAGACTTCTGAGTCTGAAAAAGAGCTGGCCGGGGAATGCCAGACTTCCACCTCAGTaGCCTGTGGGCACGCACAAG +
Preference number: 2 (lower is better)
Translates to: VNIKPRLLSLKKSWPGNARLPPQ*PVGTHK
Trigger: CTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGTCT...GGCATTCCCCGGCCAGCTCTTTTTCAGACTCAGAAGTCTGGGTTTGATGTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp GGCGAGCTGAGGACTTACTTTGTCTGTACGGACACTGCCAAGTTTCAGGGGCTGCTGGAGAATGTTCACTaGTTCGGGGCTGACTTTGAG +
Preference number: 2 (lower is better)
Translates to: GELRTYFVCTDTAKFQGLLENVH*FGADFE
Trigger: CTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAG...CAGCCCCTGAAACTTGGCAGTGTCCGTACAGACAAAGTAAGTCCTCAGCTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp TTAGACTCAGGCCCCTTAGCTTCATTTCCAACTAAGCCCACGCTATCAACCAAGAGTCATGCGCTCAGCTaGCAGGGCAGCCATGAGACG +
Preference number: 2 (lower is better)
Translates to: LDSGPLASFPTKPTLSTKSHALS*QGSHET
Trigger: CGTCTCATGGCTGCCCTGCCAGCTGAGCGCATGACT...CTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAGCTAAGGGGCCTGAGTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp TCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTGATAAAAGGGGGCCATaGATCTTGTGGTCTCCTACT +
Preference number: 2 (lower is better)
Translates to: SACAVSCGFISPRKGRCIDKRGP*ILWSPT
Trigger: AGTAGGAGACCACAAGATTCATGGCCCCCTTTTATC...AATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR TCA 90 bp CTTATGGGGTCAGCTGGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAACTGTAACAACAGGGTaGGAAATGACCAAACTGCCC +
Preference number: 2 (lower is better)
Translates to: LMGSAGCGDRVLRNVVTATVTTG*EMTKLP
Trigger: GGGCAGTTTGGTCATTTCTCACCCTGTTGTTACAGT...TGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCAGCTGACCCCATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR GCA 90 bp TGCCCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGACTATTTTGAAAGAATaGTGCACAGGTATGGCAACA +
Preference number: 2 (lower is better)
Translates to: CPGLQIKSTAKCGGGGGGTILKE*CTGMAT
Trigger: TGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGT...CCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR GCA 90 bp GGCGAGCTGAGGACTTACTTTGTCTGTACGGACACTGCCAAGTTTCAGGGGCTGTGGCTTCTTTGGACCTaGACTGGAGGATTTCTCAGA +
Preference number: 2 (lower is better)
Translates to: GELRTYFVCTDTAKFQGLWLLWT*TGGFLR
Trigger: TCTGAGAAATCCTCCAGTGCAGGTCCAAAGAAGCCA...CAGCCCCTGAAACTTGGCAGTGTCCGTACAGACAAAGTAAGTCCTCAGCTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp CTTAACCGGTGGCCTCATCACCAGAGCATCGCCAGGATTTCTAATGCACTCAGTTTTGTCAGGGGTGGGTaGGAGGTGCCTAATTACCCA +
Preference number: 2 (lower is better)
Translates to: LNRWPHHQSIARISNALSFVRGG*EVPNYP
Trigger: TGGGTAATTAGGCACCTCCCACCCACCCCTGACAAA...ACTGAGTGCATTAGAAATCCTGGCGATGCTCTGGTGATGAGGCCACCGGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CCA 90 bp TTAGACTCAGGCCCCTTAGCTTCATTTCCAACTAAGCCCACGCTATCAACCAAGACTGAGGGCTCCTGCTaGATTCCGAAAAGGCCGGGA +
Preference number: 2 (lower is better)
Translates to: LDSGPLASFPTKPTLSTKTEGSC*IPKRPG
Trigger: TCCCGGCCTTTTCGGAATCCAGCAGGAGCCCTCAGT...CTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAGCTAAGGGGCCTGAGTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CAA 90 bp GGAGAGAGGTGCTTTGAAAGTAAGGTGCGGCCTTTCACCTCTTCCTaGATTACTCACACATCTTTGCGTTCTCCCCTGCCGTCCTTCAAC +
Preference number: 2 (lower is better)
Translates to: GERCFESKVRPFTSS*ITHTSLRSPLPSFN
Trigger: GTTGAAGGACGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCGCACCTTACTTTCAAAGCACCTCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR CAA 90 bp ACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTaGGACCTGCACTGGAGGATTTCTCAGACACATGCACCAGATTCT +
Preference number: 2 (lower is better)
Translates to: TPIPKACRWLCMLAS*DLHWRISQTHAPDS
Trigger: AGAATCTGGTGCATGTGTCTGAGAAATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp CGGCCTTTCACCTCTTCCTTGATTACTCACACATCTTTGCGTTCTCCCCTGCCGGCCCGTGACTTTTTCTaGATGGACTTCATAACCGGA +
Preference number: 2 (lower is better)
Translates to: RPFTSSLITHTSLRSPLPARDFF*MDFITG
Trigger: TCCGGTTATGAAGTCCATTCAGAAAAAGTCACGGGC...CGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR GCA 90 bp GTTAACATCAAACCCAGACTTCTGAGTCTGAAAAAGAGCTGGCCGGGGAATGCCCTTTGTTCCCTGAGGTaGCAGGCAGGCAACTTTAGC +
Preference number: 2 (lower is better)
Translates to: VNIKPRLLSLKKSWPGNALCSLR*QAGNFS
Trigger: GCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAG...GGCATTCCCCGGCCAGCTCTTTTTCAGACTCAGAAGTCTGGGTTTGATGTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR GCA 90 bp CTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCCAAACAGAGGAAATCAGTCCATGGGCCTGTGATTaGTGGAGTGATTGGGGCCCG +
Preference number: 2 (lower is better)
Translates to: LHFQLSPRYQPSQTEEISPWACD*WSDWGP
Trigger: CGGGCCCCAATCACTCCAGCAATCACAGGCCCATGG...ACTGATTTCCTCTGTTTGGCTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR GCA 90 bp CTGGAGACAAAGAATCTACATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCGCCATGAGACGTGTGTaGGAGAGGCGGCGATGGGTG +
Preference number: 2 (lower is better)
Translates to: LETKNLHSCVDNAVFALCAMRRV*ERRRWV
Trigger: CACCCATCGCCGCCTCTCGCACACACGTCTCATGGC...GCACAGAGCAAACACAGCATTATCTACACAGGAATGTAGATTCTTTGTCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp TTAGACTCAGGCCCCTTAGCTTCATTTCCAACTAAGCCCACGCTATCAACCAAGTGGGCCTGTGATTGCTaGAGTGATTGGGGCCCGAAA +
Preference number: 2 (lower is better)
Translates to: LDSGPLASFPTKPTLSTKWACDC*SDWGPK
Trigger: TTTCGGGCCCCAATCACTCCAGCAATCACAGGCCCA...CTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAGCTAAGGGGCCTGAGTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp CGGCCTTTCACCTCTTCCTTGATTACTCACACATCTTTGCGTTCTCCCCTGCCGCAAACAAACAAACAGTaGCCTTCTCCATGGGTCAAG +
Preference number: 2 (lower is better)
Translates to: RPFTSSLITHTSLRSPLPQTNKQ*PSPWVK
Trigger: CTTGACCCATGGAGAAGGTCACTGTTTGTTTGTTTG...CGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR GCA 90 bp CGGCCTTTCACCTCTTCCTTGATTACTCACACATCTTTGCGTTCTCCCCTGCCGGTGAGTCAAGGCAAATaGAAAAAGCCAGGTTTTGGG +
Preference number: 2 (lower is better)
Translates to: RPFTSSLITHTSLRSPLPVSQGK*KKPGFG
Trigger: CCCAAAACCTGGCTTTTTGCATTTGCCTTGACTCAC...CGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CCA 90 bp GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCAAAATATGATTTGAGGTaGTGCATGCAAGTAACTAGG +
Preference number: 2 (lower is better)
Translates to: GCGDRVLRNVVTARRRGAKYDLR*CMQVTR
Trigger: CCTAGTTACTTGCATGCACCACCTCAAATCATATTT...TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR TCA 90 bp TCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCAGTGTAAAGAAATATaGTTTGAGGTGGTGCATGCA +
Preference number: 2 (lower is better)
Translates to: SACAVSCGFISPRKGRCIQCKEI*FEVVHA
Trigger: TGCATGCACCACCTCAAATCATATTTCTTTACACTG...AATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR GCA 90 bp CTTATGGGGTCAGCTGGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCATATGATTTGAGGTGGTaGATGCAAGTAACTAGGGTT +
Preference number: 2 (lower is better)
Translates to: LMGSAGCGDRVLRNVVTAYDLRW*MQVTRV
Trigger: AACCCTAGTTACTTGCATGCACCACCTCAAATCATA...TGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCAGCTGACCCCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR GCA 90 bp ACCAGAGCATCGCCAGGATTTCTAATGCACTCAGTTTCCCTACATAGCAGGGATGAACCTGTCTGCCTGTaGTGTGTCGTGTGGCTTTAT +
Preference number: 2 (lower is better)
Translates to: TRASPGFLMHSVSLHSRDEPVCL*CVVWLY
Trigger: ATAAAGCCACACGACACAGCACAGGCAGACAGGTTC...ATCCCTGCTATGTAGGGAAACTGAGTGCATTAGAAATCCTGGCGATGCTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR GCA 90 bp CTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCCAAACAGAGGAAATCAGTGGAAGGCAGACTGCATaGCTGGGCAGTCTCTATCTG +
Preference number: 2 (lower is better)
Translates to: LHFQLSPRYQPSQTEEISGRQTA*LGSLYL
Trigger: CAGATAGAGACTGCCCAGGCATGCAGTCTGCCTTCC...ACTGATTTCCTCTGTTTGGCTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp TTAGACTCAGGCCCCTTAGCTTCATTTCCAACTAAGCCCACGCTATCAACCAAGGATTGCTGGAGTGATTaGGGCCCGAAAACCTCAGTA +
Preference number: 2 (lower is better)
Translates to: LDSGPLASFPTKPTLSTKDCWSD*GPKTSV
Trigger: TACTGAGGTTTTCGGGCCCCAATCACTCCAGCAATC...CTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAGCTAAGGGGCCTGAGTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp CTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCCAAACAGAGGAAATCAGTCCCACATTGGTGTCATaGTGGAGTTCAGCATCGCCC +
Preference number: 2 (lower is better)
Translates to: LHFQLSPRYQPSQTEEISPTLVS*WSSASP
Trigger: GGGCGATGCTGAACTCCACCATGACACCAATGTGGG...ACTGATTTCCTCTGTTTGGCTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp CTGGAGAGCTTCAAAACTAGAAGGATCTACTCCGCATGGGTGCATGCAGAGGCTGGAGCCTTTACAAGATaGTTATACAGGGTTGCAGAT +
Preference number: 2 (lower is better)
Translates to: LESFKTRRIYSAWVHAEAGAFTR*LYRVAD
Trigger: ATCTGCAACCCTGTATAATCATCTTGTAAAGGCTCC...AGCCTCTGCATGCACCCATGCGGAGTAGATCCTTCTAGTTTTGAAGCTCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR GCA 90 bp GCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTGCGGCCTTATTTTGAAAGAATGCTaGACAGGTATGGCAACAGCC +
Preference number: 2 (lower is better)
Translates to: ACEASILERGALKVRCGLILKEC*TGMATA
Trigger: GGCTGTTGCCATACCTGTGCAGCATTCTTTCAAAAT...AAGGCCGCACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR GCA 90 bp CATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCAGACACAGATGGAAGGGAAGAAGCTTGAGGCTTTaGCTGCACGCTTGGGTAACT +
Preference number: 2 (lower is better)
Translates to: HSCVDNAVFALCRHRWKGRSLRL*LHAWVT
Trigger: AGTTACCCAAGCGTGCAGGCAAAGCCTCAAGCTTCT...TCCCTTCCATCTGTGTCTGCACAGAGCAAACACAGCATTATCTACACAGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR GCA 90 bp CTGGAGACAAAGAATCTACATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCCTATGGAGTGGCGGCTaGTTCACCGCTTCCTTCTTG +
Preference number: 2 (lower is better)
Translates to: LETKNLHSCVDNAVFALCLWSGG*FTASFL
Trigger: CAAGAAGGAAGCGGTGAAGCAGCCGCCACTCCATAG...GCACAGAGCAAACACAGCATTATCTACACAGGAATGTAGATTCTTTGTCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp CATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCAGACACAGATGGAAGGGAATGTGGCCAGCCGAATaGAAAGCACTGGAGAACTTG +
Preference number: 2 (lower is better)
Translates to: HSCVDNAVFALCRHRWKGMWPAE*KALENL
Trigger: CAAGTTCTCCAGTGCTTTCCATTCGGCTGGCCACAT...TCCCTTCCATCTGTGTCTGCACAGAGCAAACACAGCATTATCTACACAGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CAA 90 bp ATCCTGTCTGTGGGACATAAGGAAGAAGCATTGGAAGGCACTATTTaGAAAGAATGCTGCACAGGTATGGCAACAGCCCCAAGCACATTC +
Preference number: 2 (lower is better)
Translates to: ILSVGHKEEALEGTI*KECCTGMATAPSTF
Trigger: GAATGTGCTTGGGGCTGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGTGCCTTCCAATGCTTCTTCCTTATGTCCCACAGACAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR TCA 90 bp CATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCTTTACAAGAGGAGGGAACGAAAATTaGACCTGTCTGCCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: HEPRKVLHKVLHTGAFTRGGNEN*TCLPVL
Trigger: CAGCACAGGCAGACAGGTTCAATTTTCGTTCCCTCC...TCTTGTAAAGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CCA 90 bp GGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGACCAAACTGCCACTGACCAGACTTGTTaGGGTCCTGGGATGAGTTGC +
Preference number: 2 (lower is better)
Translates to: GIESQPNCNNRVRNDQTATDQTC*GPGMSC
Trigger: GCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGT...GGCAGTTTGGTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR CAA 90 bp AGTAAGGTGCGGCCTTTCACCTCTTCCTTGATTACTCACACATCTTaGCGTTCTCCCCTGCCGTCCTTCAACTGTATCTTACTTTTCTTA +
Preference number: 2 (lower is better)
Translates to: SKVRPFTSSLITHTS*RSPLPSFNCILLFL
Trigger: TAAGAAAAGTAAGATACAGTTGAAGGACGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCGCACCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR GCA 90 bp GCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTGCGGCCTTTTCTACACAAAGTCTTaGATACAGGAGCCTTTACAA +
Preference number: 2 (lower is better)
Translates to: ACEASILERGALKVRCGLFYTKS*IQEPLQ
Trigger: TTGTAAAGGCTCCTGTATGCAAGACTTTGTGTAGAA...AAGGCCGCACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CCA 90 bp CTCCCCTGCCGTCCTTCAACTGTATCTTACTTTTCTTACCAGAAAGGAATGGAGCAAAAAGCCAGGTTTTaGGGATGTGTCTTACTGTGC +
Preference number: 2 (lower is better)
Translates to: LPCRPSTVSYFSYQKGMEQKARF*GCVLLC
Trigger: GCACAGTAAGACACATCCCCAAAACCTGGCTTTTTG...CTCCATTCCTTTCTGGTAAGAAAAGTAAGATACAGTTGAAGGACGGCAGGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CCA 90 bp CATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCAGACACAGATGGAAGGGATCTTTGGACCTGCACTaGAGGATTTCTCAGACACAT +
Preference number: 2 (lower is better)
Translates to: HSCVDNAVFALCRHRWKGSLDLH*RISQTH
Trigger: ATGTGTCTGAGAAATCCTCCAGTGCAGGTCCAAAGA...TCCCTTCCATCTGTGTCTGCACAGAGCAAACACAGCATTATCTACACAGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp CTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCCAAACAGAGGAAATCAGTTTCAGGCATAAACCATaGGCCTGTGATTGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: LHFQLSPRYQPSQTEEISFRHKP*ACDCWS
Trigger: ACTCCAGCAATCACAGGCCCATGGTTTATGCCTGAA...ACTGATTTCCTCTGTTTGGCTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CAA 90 bp CGCTTCTTAGTGATGATCCTGTCTGTGGGACATAAGGAAGAAGCATaGGAAGGCACTATTTTGAAAGAATGCTGCACAGGTATGGCAACA +
Preference number: 2 (lower is better)
Translates to: RFLVMILSVGHKEEA*EGTILKECCTGMAT
Trigger: TGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGTGCCTTCCAATGCTTCTTCCTTATGTCCCACAGACAGGATCATCACTAAGAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CCA 90 bp CATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCCTTTACAAGATACAGGGTTGCAGATTaGGTGACTGACCAGACTTGT +
Preference number: 2 (lower is better)
Translates to: HEPRKVLHKVLHTGAFTRYRVAD*VTDQTC
Trigger: ACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTA...TCTTGTAAAGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CCA 90 bp CTGGAGACAAAGAATCTACATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCGCATGTTGGCTTCTTTaGACCTGCACTGGAGGATTT +
Preference number: 2 (lower is better)
Translates to: LETKNLHSCVDNAVFALCACWLL*TCTGGF
Trigger: AAATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGC...GCACAGAGCAAACACAGCATTATCTACACAGGAATGTAGATTCTTTGTCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR TCA 90 bp CTAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGAGTTTAACAAATAACTaGCTACCACTCACTCATGCA +
Preference number: 2 (lower is better)
Translates to: LGVPMNPVKFYTKSCIQESLTNN*LPLTHA
Trigger: TGCATGAGTGAGTGGTAGTCAGTTATTTGTTAAACT...CTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CCA 90 bp CTGGAGACAAAGAATCTACATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCCCGAATGGAAAGCACTaGAGAACTTGGGAAAATCCA +
Preference number: 2 (lower is better)
Translates to: LETKNLHSCVDNAVFALCPNGKH*RTWENP
Trigger: TGGATTTTCCCAAGTTCTCCAGTGCTTTCCATTCGG...GCACAGAGCAAACACAGCATTATCTACACAGGAATGTAGATTCTTTGTCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp TTAGACTCAGGCCCCTTAGCTTCATTTCCAACTAAGCCCACGCTATCAACCAAGGACAAGCTCAGCAGTTaGACAATTATTCTGATGTTT +
Preference number: 2 (lower is better)
Translates to: LDSGPLASFPTKPTLSTKDKLSS*TIILMF
Trigger: AAACATCAGAATAATTGTCCAACTGCTGAGCTTGTC...CTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAGCTAAGGGGCCTGAGTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CCA 90 bp ACCAGAGCATCGCCAGGATTTCTAATGCACTCAGTTTCCCTACATAGCAGGGATATACCTAAGGTTTTCTaGCTTATTGAGGAAATTTCC +
Preference number: 2 (lower is better)
Translates to: TRASPGFLMHSVSLHSRDIPKVF*LIEEIS
Trigger: GGAAATTTCCTCAATAAGCCAGAAAACCTTAGGTAT...ATCCCTGCTATGTAGGGAAACTGAGTGCATTAGAAATCCTGGCGATGCTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR CCA 72 bp CTGAGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTaGCGGCTGCTTCACCGCTTCCTTCTTGCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: LRSRGSLAAAME*RLLHRFLLACS
Trigger: GCTGCAGGCAAGAAGGAAGCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CAA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTCAGAAGCTTGAGGCTTaGCCTGCACGCTTGGGTAAC +
Preference number: 3 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPQKLEA*PARLGN
Trigger: GTTACCCAAGCGTGCAGGCAAAGCCTCAAGCTTCTG...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CAA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTGGTTCGGGGCTGACTTaGAGATCTTTGTTCCCTGAG +
Preference number: 3 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPGSGLT*RSLFPE
Trigger: CTCAGGGAACAAAGATCTCAAAGTCAGCCCCGAACC...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 72 bp GAAGAGCAGGAGCCGCCAAGGGCCATGTCCTCACCATaGTTAGTCATGCGCTCAGCTGGCAGGGCAGCCATG +
Preference number: 3 (lower is better)
Translates to: EEQEPPRAMSSP*LVMRSAGRAAM
Trigger: CATGGCTGCCCTGCCAGCTGAGCGCATGACTAAGCATGGTGAGGACATGGCCCTTGGCGGCTCCTGCTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CCA 72 bp CTACTCCGCATGGGTGCATGCAGAGGCTCCTGGATCTaGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTC +
Preference number: 3 (lower is better)
Translates to: LLRMGACRGSWI*EARPLTNAEPF
Trigger: GAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGCACCCATGCGGAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR CCA 72 bp GGCCATGTCCTCACCATGCTTAGTCATGCGCTCAGCTaGCAGGGCAGCCATGAGACGTGTGTGCGAGAGGCG +
Preference number: 3 (lower is better)
Translates to: GHVLTMLSHALS*QGSHETCVREA
Trigger: CGCCTCTCGCACACACGTCTCATGGCTGCCCTGCCAGCTGAGCGCATGACTAAGCATGGTGAGGACATGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 72 bp AAATCTGTGCTCTCAAGATCTAGCAGTGACCAGGGCTaGCCGGCGGGGGCTCTCCTGGCAAGTCAGGAAGGT +
Preference number: 3 (lower is better)
Translates to: KSVLSRSSSDQG*PAGALLASQEG
Trigger: ACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTCACTGCTAGATCTTGAGAGCACAGATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 72 bp CTCCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTaGGCCGTTCTTGCTCTGAAACTGCGTGAGTCAAGG +
Preference number: 3 (lower is better)
Translates to: LLDLGSPPPHKC*AVLALKLRESR
Trigger: CCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 72 bp GACCTGCACCATCCTCCAGGGCCTCGGGTACTCTTGTaGATGCCGTGGCCTGATCAACGTCAAAGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: DLHHPPGPRVLL*MPWPDQRQRQR
Trigger: CCTTTGCCTTTGACGTTGATCAGGCCACGGCATTCACAAGAGTACCCGAGGCCCTGGAGGATGGTGCAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CCA 72 bp ACTCTCCGCCCCACGCCAATCCCAAAGGCATGCAGATaGCTGTGCATGTTGGCTTCTTTGGACCTGCACTGG +
Preference number: 3 (lower is better)
Translates to: TLRPTPIPKACR*LCMLASLDLHW
Trigger: CCAGTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR TCA 72 bp GCTAAGTGCGGGGGTGGCGGTGGAGGGAACGAAAATTaGACCTGTCTGCCTGTGCTGTGTCGTGTGGCTTTA +
Preference number: 3 (lower is better)
Translates to: AKCGGGGGGNEN*TCLPVLCRVAL
Trigger: TAAAGCCACACGACACAGCACAGGCAGACAGGTTCAATTTTCGTTCCCTCCACCGCCACCCCCGCACTTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 72 bp AGACACATGCACCAGATTCTGGCTCGAAGCAGCCACTaGGCCATAATGCGCAGGGGAGGCCAGAAGCTCTGT +
Preference number: 3 (lower is better)
Translates to: RHMHQILARSSH*AIMRRGGQKLC
Trigger: ACAGAGCTTCTGGCCTCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGCCAGAATCTGGTGCATGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 72 bp GCGGTGGAGGGAACGAAAATTGAACCTGTCTGCCTGTaGTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGG +
Preference number: 3 (lower is better)
Translates to: AVEGTKIEPVCL*CVVWLYQPEEG
Trigger: CCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGACAGGTTCAATTTTCGTTCCCTCCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR CCA 72 bp CTAGCAGTGACCAGGGCTGCCCGGCGGGGGCTCTCCTaGCAAGTCAGGAAGGTTTCTGTTGCTAATATAACA +
Preference number: 3 (lower is better)
Translates to: LAVTRAARRGLS*QVRKVSVANIT
Trigger: TGTTATATTAGCAACAGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCGGGCAGCCCTGGTCACTGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR CCA 72 bp GTCACCTTACTTAAAGGGTGTGCCCTTATCTCGTCCTaGGGGAGGGGCACAGGTACTTGTAGGGCTCAGCCA +
Preference number: 3 (lower is better)
Translates to: VTLLKGCALISS*GRGTGTCRAQP
Trigger: TGGCTGAGCCCTACAAGTACCTGTGCCCCTCCCCCAGGACGAGATAAGGGCACACCCTTTAAGTAAGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 72 bp CAGGTCTCTCTTCCTTTTCAGGTTACCGAGGAGACCTaGACCATCCTCCAGGGCCTCGGGTACTCTTGTGAA +
Preference number: 3 (lower is better)
Translates to: QVSLPFQVTEET*TILQGLGYSCE
Trigger: TTCACAAGAGTACCCGAGGCCCTGGAGGATGGTGCAGGTCTCCTCGGTAACCTGAAAAGGAAGAGAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CCA 72 bp TACAGGGTTGCAGATTGGGTGACTGACCAGACTTGTTaGGGTCCTGGGATGAGTTGCCCCGGGCTGCAAATT +
Preference number: 3 (lower is better)
Translates to: YRVADWVTDQTC*GPGMSCPGLQI
Trigger: AATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 72 bp GCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTaGAACTGCGTGAGTCAAGGCAAATGCAAAAAGCCA +
Preference number: 3 (lower is better)
Translates to: ARPLTNAEPFLL*NCVSQGKCKKP
Trigger: TGGCTTTTTGCATTTGCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 72 bp ACTGCATGCCTGGGCAGTCTCTATCTGTCCCTACCATaGCAGGTGTTCTTCCCGCCTCTGAAGACAACAGGT +
Preference number: 3 (lower is better)
Translates to: TACLGSLYLSLP*QVFFPPLKTTG
Trigger: ACCTGTTGTCTTCAGAGGCGGGAAGAACACCTGTCATGGTAGGGACAGATAGAGACTGCCCAGGCATGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 72 bp ACTCCCAGTGTGCTTTTGTCAGGGGTGGGTGGGAGGTaGCTAATTACCCATACAAGGGCATCATTCCCACTG +
Preference number: 3 (lower is better)
Translates to: TPSVLLSGVGGR*LITHTRASFPL
Trigger: CAGTGGGAATGATGCCCTTGTATGGGTAATTAGGCACCTCCCACCCACCCCTGACAAAAGCACACTGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR GCA 72 bp GTGACTGACCAGACTTGTTGGGGTCCTGGGATGAGTTaGCCCGGGCTGCAAATTAAGAGTACAGCTAAGTGC +
Preference number: 3 (lower is better)
Translates to: VTDQTCWGPGMS*PGLQIKSTAKC
Trigger: GCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CAA 90 bp GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCAACCATTTATCTCAGCTaGCTGATAAAAGGGGGCCAT +
Preference number: 3 (lower is better)
Translates to: GCGDRVLRNVVTARRRGATIYLS*LIKGGH
Trigger: ATGGCCCCCTTTTATCAGCAAGCTGAGATAAATGGT...TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CAA 90 bp GTCACCTTACTTAAAGGGTGTGCCCTTATCTCGTCCTGGGGGAGGGGCACAGGTGCTTTGCCTGCACGCTaGGGTAACTGTAAACATCAT +
Preference number: 3 (lower is better)
Translates to: VTLLKGCALISSWGRGTGALPAR*GNCKHH
Trigger: ATGATGTTTACAGTTACCCAAGCGTGCAGGCAAAGC...ACCTGTGCCCCTCCCCCAGGACGAGATAAGGGCACACCCTTTAAGTAAGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 72 bp TTCTTTGGACCTGCACTGGAGGATTTCTCAGACACATaGACCAGATTCTGGCTCGAAGCAGCCACTGAGCCA +
Preference number: 3 (lower is better)
Translates to: FFGPALEDFSDT*TRFWLEAATEP
Trigger: TGGCTCAGTGGCTGCTTCGAGCCAGAATCTGGTGCATGTGTCTGAGAAATCCTCCAGTGCAGGTCCAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CAA 90 bp GAGGACTTACTTTGTCTGTACGGACACTGCCAAGTTTCAGGGGCTGGGGCTGAATGCATGTTGGCTTCTTaGGACCTGCACTGGAGGATT +
Preference number: 3 (lower is better)
Translates to: EDLLCLYGHCQVSGAGAECMLAS*DLHWRI
Trigger: AATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGCA...TTCAGCCCCAGCCCCTGAAACTTGGCAGTGTCCGTACAGACAAAGTAAGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR TCA 72 bp TCAGGGCACGAGAACCAGGTACTCAAGCCCAAGAGGTaGAATTCAGCTGACTGTCCTCACTTAAAGGTGACC +
Preference number: 3 (lower is better)
Translates to: SGHENQVLKPKR*NSADCPHLKVT
Trigger: GGTCACCTTTAAGTGAGGACAGTCAGCTGAATTTCACCTCTTGGGCTTGAGTACCTGGTTCTCGTGCCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 72 bp TCTCTGGCCTCCTCTAAGGGCAGAAGCTTGAGGCTTTaGCTGCACGCTTGGGTAACTGTAAACATCATCTTC +
Preference number: 3 (lower is better)
Translates to: SLASSKGRSLRL*LHAWVTVNIIF
Trigger: GAAGATGATGTTTACAGTTACCCAAGCGTGCAGGCAAAGCCTCAAGCTTCTGCCCTTAGAGGAGGCCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR TCA 72 bp TACAAGATGATTATACAGGGTTGCAGATTGGGTGACTaGCCAGACTTGTTGGGGTCCTGGGATGAGTTGCCC +
Preference number: 3 (lower is better)
Translates to: YKMIIQGCRLGD*PDLLGSWDELP
Trigger: GGGCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTATAATCATCTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 72 bp GCTTTGAAAGTAAGGTGCGGCCTTTCACCTCTTCCTTaGTTACTCACACATCTTTGCGTTCTCCCCTGCCGT +
Preference number: 3 (lower is better)
Translates to: ALKVRCGLSPLP*LLTHLCVLPCR
Trigger: ACGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCGCACCTTACTTTCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 72 bp ATCTGTCCCTACCATGACAGGTGTTCTTCCCGCCTCTaGAGACAACAGGTCTCTCTTCCTTTTCAGGTTACC +
Preference number: 3 (lower is better)
Translates to: ICPYHDRCSSRL*RQQVSLPFQVT
Trigger: GGTAACCTGAAAAGGAAGAGAGACCTGTTGTCTTCAGAGGCGGGAAGAACACCTGTCATGGTAGGGACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 72 bp TTTATCAGCCCGAGGAAGGGCAGGTGTATTCTAATTTaGACAAAGGTGCTGGGTAGACTAGTGGCAGCTCTC +
Preference number: 3 (lower is better)
Translates to: FISPRKGRCILI*TKVLGRLVAAL
Trigger: GAGAGCTGCCACTAGTCTACCCAGCACCTTTGTGCAAATTAGAATACACCTGCCCTTCCTCGGGCTGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR GCA 72 bp CCTCTAGGCCAGTCCACCCAGTCTGTGTGGCACAGCTaGACCTCGCCATCTATTATGAAAGGTTTTAGAAAT +
Preference number: 3 (lower is better)
Translates to: PLGQSTQSVWHS*TSPSIMKGFRN
Trigger: ATTTCTAAAACCTTTCATAATAGATGGCGAGGTGCAGCTGTGCCACACAGACTGGGTGGACTGGCCTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CCA 72 bp CACATGATGAAAACAGACTTCCACCTCAGTGGCCTGTaGGCACGCACAAGTGAGGTCTGTTTTTCTAGACAC +
Preference number: 3 (lower is better)
Translates to: HMMKTDFHLSGL*ARTSEVCFSRH
Trigger: GTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGTCTGTTTTCATCATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CCA 72 bp CTGCGTGAGTCAAGGCAAATGCAAAAAGCCAGGTTTTaGGGATGTGTCTTACTGTGCTTCAACTTCCCAAGG +
Preference number: 3 (lower is better)
Translates to: LRESRQMQKARF*GCVLLCFNFPR
Trigger: CCTTGGGAAGTTGAAGCACAGTAAGACACATCCCCAAAACCTGGCTTTTTGCATTTGCCTTGACTCACGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CAA 90 bp CTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCCAAACAGAGGAAATCAGTAGATGGCTGTGCATGTaGGCTTCTTTGGACCTGCAC +
Preference number: 3 (lower is better)
Translates to: LHFQLSPRYQPSQTEEISRWLCM*ASLDLH
Trigger: GTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCT...ACTGATTTCCTCTGTTTGGCTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR-3UTR CAA 90 bp CTGGAGAGCTTCAAAACTAGAAGGATCTACTCCGCATGGGTGCATGCAGAGGCTCAACTTCCCAAGGAATaGAAAGTCAACCTAACTGTA +
Preference number: 3 (lower is better)
Translates to: LESFKTRRIYSAWVHAEAQLPKE*KVNLTV
Trigger: TACAGTTAGGTTGACTTTCAATTCCTTGGGAAGTTG...AGCCTCTGCATGCACCCATGCGGAGTAGATCCTTCTAGTTTTGAAGCTCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CAA 90 bp CTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCCAAACAGAGGAAATCAGTTTCACTCTAGTTGTTTaGTCCCCGCATCCTGTGCTG +
Preference number: 3 (lower is better)
Translates to: LHFQLSPRYQPSQTEEISFTLVV*SPHPVL
Trigger: CAGCACAGGATGCGGGGACAAAACAACTAGAGTGAA...ACTGATTTCCTCTGTTTGGCTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CCA 72 bp TCTAAGGGCAGAAGCTTGAGGCTTTGCCTGCACGCTTaGGTAACTGTAAACATCATCTTCAGGCATAAACCA +
Preference number: 3 (lower is better)
Translates to: SKGRSLRLCLHA*VTVNIIFRHKP
Trigger: TGGTTTATGCCTGAAGATGATGTTTACAGTTACCCAAGCGTGCAGGCAAAGCCTCAAGCTTCTGCCCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR GCA 72 bp GAAGAAGCATTGGAAGGCACTATTTTGAAAGAATGCTaGACAGGTATGGCAACAGCCCCAAGCACATTCCTT +
Preference number: 3 (lower is better)
Translates to: EEALEGTILKEC*TGMATAPSTFL
Trigger: AAGGAATGTGCTTGGGGCTGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGTGCCTTCCAATGCTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR GCA 72 bp AAGGAAGAAGCATTGGAAGGCACTATTTTGAAAGAATaGTGCACAGGTATGGCAACAGCCCCAAGCACATTC +
Preference number: 3 (lower is better)
Translates to: KEEALEGTILKE*CTGMATAPSTF
Trigger: GAATGTGCTTGGGGCTGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGTGCCTTCCAATGCTTCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR TCA 72 bp CTACACAAAGTCTTGCATACAGGAGCCTTTACAAGATaGTTATACAGGGTTGCAGATTGGGTGACTGACCAG +
Preference number: 3 (lower is better)
Translates to: LHKVLHTGAFTR*LYRVADWVTDQ
Trigger: CTGGTCAGTCACCCAATCTGCAACCCTGTATAATCATCTTGTAAAGGCTCCTGTATGCAAGACTTTGTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR GCA 72 bp GTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTaGATACAGGAGCCTTTACAAGATGATTATACAGGG +
Preference number: 3 (lower is better)
Translates to: VPMNPVKFYTKS*IQEPLQDDYTG
Trigger: CCCTGTATAATCATCTTGTAAAGGCTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR-3UTR CAA 90 bp TTAGACTCAGGCCCCTTAGCTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCTCAAAGCCAGGCCTTaGTTAATACTTTTAACAAAG +
Preference number: 3 (lower is better)
Translates to: LDSGPLASFPTKPTLSTKLKARP*LILLTK
Trigger: CTTTGTTAAAAGTATTAACAAAGGCCTGGCTTTGAG...CTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAGCTAAGGGGCCTGAGTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp CTGAGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTGGCGGCTGCTTCACCGCCAGGGGCAGCCTGGCTaGGGCTATGGAGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LRSRGSLAAAMEWRLLHRQGQPG*GYGVAA
Trigger: AGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTG...GCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GGGGAGCCCCTGCCTCTAGGCCAGTCCACCCAGTCTGTGTGGCACAGCTGCACCCTGTCCCGCAGGAGCTaGAGCGGCAGCATGCCCACA +
Preference number: 4 (lower is better)
Translates to: GEPLPLGQSTQSVWHSCTLSRRS*SGSMPT
Trigger: TGTGGGCATGCTGCCGCTCCAGCTCCTGCGGGACAG...GGTGCAGCTGTGCCACACAGACTGGGTGGACTGGCCTAGAGGCAGGGGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp CTGAGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTGGCGGCTGCTTCACCGCTGCGAGAGGCGGCGATaGGTGGAGGGAACCCCACAC +
Preference number: 4 (lower is better)
Translates to: LRSRGSLAAAMEWRLLHRCERRR*VEGTPH
Trigger: GTGTGGGGTTCCCTCCACCCATCGCCGCCTCTCGCA...GCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp TCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTCCGCCTCCGCGTCGGTaGGCCCGGGTGATGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SAPRQSQRHADGCACWLLPPPRR*ARVMER
Trigger: CCGCTCCATCACCCGGGCTCACCGACGCGGAGGCGG...AAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp CTGAGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTGGCGGCTGCTTCACCGCGGAGATGCAAGGATCTaGCCCACAGCCTGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LRSRGSLAAAMEWRLLHRGDARI*PTACPA
Trigger: TGCGGGACAGGCTGTGGGTCAGATCCTTGCATCTCC...GCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp CTGAGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTGGCGGCTGCTTCACCGCGTTACCGAGGAGACCTaGACCATCCTCCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRSRGSLAAAMEWRLLHRVTEET*TILQGL
Trigger: GAGGCCCTGGAGGATGGTGCAGGTCTCCTCGGTAAC...GCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp CTGAGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTGGCGGCTGCTTCACCGCCCATGGGCCTGTGATTaGTGGAGTGATTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LRSRGSLAAAMEWRLLHRPWACD*WSDWGP
Trigger: CGGGCCCCAATCACTCCAGCAATCACAGGCCCATGG...GCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTGCTGGAGCGGCAGCATaGCCACATTGGTGTCATGGT +
Preference number: 4 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPAGAAA*PHWCHG
Trigger: ACCATGACACCAATGTGGGCATGCTGCCGCTCCAGC...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GGGGAGCCCCTGCCTCTAGGCCAGTCCACCCAGTCTGTGTGGCACAGCTGCACCAGACTTCCACCTCAGTaGCCTGTGGGCACGCACAAG +
Preference number: 4 (lower is better)
Translates to: GEPLPLGQSTQSVWHSCTRLPPQ*PVGTHK
Trigger: CTTGTGCGTGCCCACAGGCCACTGAGGTGGAAGTCT...GGTGCAGCTGTGCCACACAGACTGGGTGGACTGGCCTAGAGGCAGGGGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp CTGAGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTGGCGGCTGCTTCACCGCACTGAGGGCTCCTGCTaGATTCCGAAAAGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: LRSRGSLAAAMEWRLLHRTEGSC*IPKRPG
Trigger: TCCCGGCCTTTTCGGAATCCAGCAGGAGCCCTCAGT...GCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTGGCAGACTGCATGCCTaGGCAGTCTCTATCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPGRLHA*AVSICP
Trigger: GGGACAGATAGAGACTGCCCAGGCATGCAGTCTGCC...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp CTGAGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTGGCGGCTGCTTCACCGCGAGATCTTTGTTCCCTaGGGTGCCAGGCAGGCAACT +
Preference number: 4 (lower is better)
Translates to: LRSRGSLAAAMEWRLLHREIFVP*GARQAT
Trigger: AGTTGCCTGCCTGGCACCTCAGGGAACAAAGATCTC...GCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp CTGAGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTGGCGGCTGCTTCACCGCCCTCGGGTACTCTTGTaGATGCCGTGGCCTGATCAA +
Preference number: 4 (lower is better)
Translates to: LRSRGSLAAAMEWRLLHRPRVLL*MPWPDQ
Trigger: TTGATCAGGCCACGGCATTCACAAGAGTACCCGAGG...GCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp GGCGAGCTGAGGACTTACTTTGTCTGTACGGACACTGCCAAGTTTCAGGGGCTGGTCGGTGAGCCCGGGTaGTGGAGCGGGGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GELRTYFVCTDTAKFQGLVGEPG*WSGVGS
Trigger: GCTCCCCACCCCGCTCCATCACCCGGGCTCACCGAC...CAGCCCCTGAAACTTGGCAGTGTCCGTACAGACAAAGTAAGTCCTCAGCTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp TCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCGCCGGGCGGCGCGATaGCCCTCTCGAGAAGACGGC +
Preference number: 4 (lower is better)
Translates to: SACAVSCGFISPRKGRCIRRAAR*PSREDG
Trigger: GCCGTCTTCTCGAGAGGGGCATCGCGCCGCCCGGCG...AATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTGGAAGGCAGACTGCATaGCTGGGCAGTCTCTATCTG +
Preference number: 4 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPGRQTA*LGSLYL
Trigger: CAGATAGAGACTGCCCAGGCATGCAGTCTGCCTTCC...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTAGTCTGAAAAAGAGCTaGCCGGGGAATGCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPSLKKS*PGNALL
Trigger: GAGGAGGGCATTCCCCGGCCAGCTCTTTTTCAGACT...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp CTTATGGGGTCAGCTGGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGCAGTGACCAGGGCTaGCCGGCGGGGGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LMGSAGCGDRVLRNVVTASSDQG*PAGALL
Trigger: CAGGAGAGCCCCCGCCGGGCAGCCCTGGTCACTGCT...TGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCAGCTGACCCCATAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTGCCATGTCCTCACCATaGTTAGTCATGCGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPAMSSP*LVMRSA
Trigger: AGCTGAGCGCATGACTAAGCATGGTGAGGACATGGC...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTAAGAGGGAGACAGTGTaGGGACGGAGACAACAGGAA +
Preference number: 4 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPKRETV*GRRQQE
Trigger: TTCCTGTTGTCTCCGTCCCCACACTGTCTCCCTCTT...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTTGTTCTTCCCGCCTCTaGAGACAACAGGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPCSSRL*RQQVSL
Trigger: AAGAGAGACCTGTTGTCTTCAGAGGCGGGAAGAACA...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp GGGGAGCCCCTGCCTCTAGGCCAGTCCACCCAGTCTGTGTGGCACAGCTGCACCCCAATCCCAAAGGCATaGAGATGGCTGTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GEPLPLGQSTQSVWHSCTPIPKA*RWLCML
Trigger: CAACATGCACAGCCATCTGCATGCCTTTGGGATTGG...GGTGCAGCTGTGCCACACAGACTGGGTGGACTGGCCTAGAGGCAGGGGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp AGAGCTGGCCGGGGAATGCCCTCCTCATACCCCAAGCCCGACTGCAACGCAGTGCTATGGAGTGGCGGCTaGTTCACCGCTTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RAGRGMPSSYPKPDCNAVLWSGG*FTASFL
Trigger: CAAGAAGGAAGCGGTGAAGCAGCCGCCACTCCATAG...CACTGCGTTGCAGTCGGGCTTGGGGTATGAGGAGGGCATTCCCCGGCCAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CAA 72 bp CGGCTATGGAGTGGCGGCTGCTTCACCGCTTCCTTCTaGCCTGCAGCTCCTACTGAAGCCCAAGTTCAGCGG +
Preference number: 4 (lower is better)
Translates to: RLWSGGCFTASF*PAAPTEAQVQR
Trigger: CCGCTGAACTTGGGCTTCAGTAGGAGCTGCAGGCAAGAAGGAAGCGGTGAAGCAGCCGCCACTCCATAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTCCGAAAACCTCAGTATaGCATCTGGGGAAACACTGT +
Preference number: 4 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPPKTSV*HLGKHC
Trigger: ACAGTGTTTCCCCAGATGTCATACTGAGGTTTTCGG...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp GAGCTGCTGTCTCACCCAGCAGCCATGGTTCTAGCTATCACACTCTCCAGGGAAACCCCACACCCTTCCTaGGAAGCAGGGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ELLSHPAAMVLAITLSRETPHPS*EAGAAW
Trigger: CCAGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGT...TTCCCTGGAGAGTGTGATAGCTAGAACCATGGCTGCTGGGTGAGACAGCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCAGACTTGTTGGGGTCCTaGGATGAGTTGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: GCGDRVLRNVVTARRRGADLLGS*DELPRA
Trigger: AGCCCGGGGCAACTCATCCCAGGACCCCAACAAGTC...TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTGATTTCTCAGACACATaGACCAGATTCTGGCTCGAA +
Preference number: 4 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPDFSDT*TRFWLE
Trigger: TTCGAGCCAGAATCTGGTGCATGTGTCTGAGAAATC...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp AGAGCTGGCCGGGGAATGCCCTCCTCATACCCCAAGCCCGACTGCAACGCAGTGGCATGCAGATGGCTGTaGATGTTGGCTTCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: RAGRGMPSSYPKPDCNAVACRWL*MLASLD
Trigger: GTCCAAAGAAGCCAACATGCACAGCCATCTGCATGC...CACTGCGTTGCAGTCGGGCTTGGGGTATGAGGAGGGCATTCCCCGGCCAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp AGAGCTGGCCGGGGAATGCCCTCCTCATACCCCAAGCCCGACTGCAACGCAGTGAGAAGCTTGAGGCTTTaGCTGCACGCTTGGGTAACT +
Preference number: 4 (lower is better)
Translates to: RAGRGMPSSYPKPDCNAVRSLRL*LHAWVT
Trigger: AGTTACCCAAGCGTGCAGGCAAAGCCTCAAGCTTCT...CACTGCGTTGCAGTCGGGCTTGGGGTATGAGGAGGGCATTCCCCGGCCAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp GAGCTGCTGTCTCACCCAGCAGCCATGGTTCTAGCTATCACACTCTCCAGGGAAGAGCTGGCCGGGGAATaGCCTCCTCATACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: ELLSHPAAMVLAITLSREELAGE*PPHTPS
Trigger: GCTTGGGGTATGAGGAGGGCATTCCCCGGCCAGCTC...TTCCCTGGAGAGTGTGATAGCTAGAACCATGGCTGCTGGGTGAGACAGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp GGCGAGCTGAGGACTTACTTTGTCTGTACGGACACTGCCAAGTTTCAGGGGCTGGCCATGAGACGTGTGTaGGAGAGGCGGCGATGGGTG +
Preference number: 4 (lower is better)
Translates to: GELRTYFVCTDTAKFQGLAMRRV*ERRRWV
Trigger: CACCCATCGCCGCCTCTCGCACACACGTCTCATGGC...CAGCCCCTGAAACTTGGCAGTGTCCGTACAGACAAAGTAAGTCCTCAGCTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GGGGAGCCCCTGCCTCTAGGCCAGTCCACCCAGTCTGTGTGGCACAGCTGCACCCTTTGCCTGCACGCTTaGGTAACTGTAAACATCATC +
Preference number: 4 (lower is better)
Translates to: GEPLPLGQSTQSVWHSCTLCLHA*VTVNII
Trigger: GATGATGTTTACAGTTACCCAAGCGTGCAGGCAAAG...GGTGCAGCTGTGCCACACAGACTGGGTGGACTGGCCTAGAGGCAGGGGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GAGGACTTACTTTGTCTGTACGGACACTGCCAAGTTTCAGGGGCTGGGGCTGAAGCCTGGCTGCGGCTATaGAGTGGCGGCTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: EDLLCLYGHCQVSGAGAEAWLRL*SGGCFT
Trigger: GGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGC...TTCAGCCCCAGCCCCTGAAACTTGGCAGTGTCCGTACAGACAAAGTAAGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp GAGCTGCTGTCTCACCCAGCAGCCATGGTTCTAGCTATCACACTCTCCAGGGAAGCTCGAAGCAGCCACTaGGCCATAATGCGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: ELLSHPAAMVLAITLSREARSSH*AIMRRG
Trigger: TCCCCTGCGCATTATGGCTCAGTGGCTGCTTCGAGC...TTCCCTGGAGAGTGTGATAGCTAGAACCATGGCTGCTGGGTGAGACAGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp AGAGCTGGCCGGGGAATGCCCTCCTCATACCCCAAGCCCGACTGCAACGCAGTGAAGGCAAAGGCGAGCTaGGGACTTACTTTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: RAGRGMPSSYPKPDCNAVKAKAS*GLTLSV
Trigger: TACAGACAAAGTAAGTCCTCAGCTCGCCTTTGCCTT...CACTGCGTTGCAGTCGGGCTTGGGGTATGAGGAGGGCATTCCCCGGCCAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp ACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACACCAAGGCCTGCAGCTCCTACTaGAGCCCAAGTTCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: TSVACGHAQVRSVFLDTKACSSY*SPSSAA
Trigger: CGCCGCTGAACTTGGGCTTCAGTAGGAGCTGCAGGC...CTTGGTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp CCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAACGCATTCCCACTGGGTATaGAGGGGCAGAACCACAGTA +
Preference number: 4 (lower is better)
Translates to: PGCKLRVQLSAGVAVEGTHSHWV*RGRTTV
Trigger: TACTGTGGTTCTGCCCCTGCATACCCAGTGGGAATG...CGTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp CTTATGGGGTCAGCTGGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCACGGCGGGGGCTCTCCTaGCAAGTCAGGAAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LMGSAGCGDRVLRNVVTARRGLS*QVRKVS
Trigger: AGAAACCTTCCTGACTTGCCAGGAGAGCCCCCGCCG...TGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCAGCTGACCCCATAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp GAGCTGCTGTCTCACCCAGCAGCCATGGTTCTAGCTATCACACTCTCCAGGGAACACCTCAGTGGCCTGTaGGCACGCACAAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ELLSHPAAMVLAITLSREHLSGL*ARTSEV
Trigger: GACCTCACTTGTGCGTGCCCACAGGCCACTGAGGTG...TTCCCTGGAGAGTGTGATAGCTAGAACCATGGCTGCTGGGTGAGACAGCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GAGCTGCTGTCTCACCCAGCAGCCATGGTTCTAGCTATCACACTCTCCAGGGAACCCCGCATCCTGTGCTaGGGTATGGATTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ELLSHPAAMVLAITLSREPRILC*GMDSLA
Trigger: GGCCAGAGAATCCATACCCCAGCACAGGATGCGGGG...TTCCCTGGAGAGTGTGATAGCTAGAACCATGGCTGCTGGGTGAGACAGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GGCGAGCTGAGGACTTACTTTGTCTGTACGGACACTGCCAAGTTTCAGGGGCTGGCCCTTATCTCGTCCTaGGGGAGGGGCACAGGTACT +
Preference number: 4 (lower is better)
Translates to: GELRTYFVCTDTAKFQGLALISS*GRGTGT
Trigger: AGTACCTGTGCCCCTCCCCCAGGACGAGATAAGGGC...CAGCCCCTGAAACTTGGCAGTGTCCGTACAGACAAAGTAAGTCCTCAGCTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GAGCTGCTGTCTCACCCAGCAGCCATGGTTCTAGCTATCACACTCTCCAGGGAAAGTCATGCGCTCAGCTaGCAGGGCAGCCATGAGACG +
Preference number: 4 (lower is better)
Translates to: ELLSHPAAMVLAITLSRESHALS*QGSHET
Trigger: CGTCTCATGGCTGCCCTGCCAGCTGAGCGCATGACT...TTCCCTGGAGAGTGTGATAGCTAGAACCATGGCTGCTGGGTGAGACAGCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp GAGCTGCTGTCTCACCCAGCAGCCATGGTTCTAGCTATCACACTCTCCAGGGAACCAGGGAAGGCAGACTaGATGCCTGGGCAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: ELLSHPAAMVLAITLSREPGKAD*MPGQSL
Trigger: TAGAGACTGCCCAGGCATGCAGTCTGCCTTCCCTGG...TTCCCTGGAGAGTGTGATAGCTAGAACCATGGCTGCTGGGTGAGACAGCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp AGAGCTGGCCGGGGAATGCCCTCCTCATACCCCAAGCCCGACTGCAACGCAGTGCCGAATGGAAAGCACTaGAGAACTTGGGAAAATCCA +
Preference number: 4 (lower is better)
Translates to: RAGRGMPSSYPKPDCNAVPNGKH*RTWENP
Trigger: TGGATTTTCCCAAGTTCTCCAGTGCTTTCCATTCGG...CACTGCGTTGCAGTCGGGCTTGGGGTATGAGGAGGGCATTCCCCGGCCAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp TCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTTGGGCCTGTGATTGCTaGAGTGATTGGGGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: SAPRQSQRHADGCACWLLWACDC*SDWGPK
Trigger: TTTCGGGCCCCAATCACTCCAGCAATCACAGGCCCA...AAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp TCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTGGGGTGGGTGGGAGGTaGCTAATTACCCATACAAGG +
Preference number: 4 (lower is better)
Translates to: SACAVSCGFISPRKGRCIGVGGR*LITHTR
Trigger: CCTTGTATGGGTAATTAGGCACCTCCCACCCACCCC...AATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp CTTATGGGGTCAGCTGGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAGGTCCTGGGATGAGTTaGCCCGGGCTGCAAATTAAG +
Preference number: 4 (lower is better)
Translates to: LMGSAGCGDRVLRNVVTAGPGMS*PGLQIK
Trigger: CTTAATTTGCAGCCCGGGGCAACTCATCCCAGGACC...TGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCAGCTGACCCCATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp CAGGTATGGCAACAGCCCCAAGCACATTCCTTCCTCACGAGTCCCAGGTCCAGCCTTTGCGTTCTCCCCTaGCGTCCTTCAACTGTATCT +
Preference number: 4 (lower is better)
Translates to: QVWQQPQAHSFLTSPRSSLCVLP*RPSTVS
Trigger: AGATACAGTTGAAGGACGGCAGGGGAGAACGCAAAG...GCTGGACCTGGGACTCGTGAGGAAGGAATGTGCTTGGGGCTGTTGCCATACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp CCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAACGGCTTTGAAAGTAAGGTaGGGCCTTTCACCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PGCKLRVQLSAGVAVEGTALKVR*GLSPLP
Trigger: AGGAAGAGGTGAAAGGCCGCACCTTACTTTCAAAGC...CGTTCCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp GAGGACTTACTTTGTCTGTACGGACACTGCCAAGTTTCAGGGGCTGGGGCTGAATACCCCAAGCCCGACTaGAACGCAGTGACTCTGGGA +
Preference number: 4 (lower is better)
Translates to: EDLLCLYGHCQVSGAGAEYPKPD*NAVTLG
Trigger: TCCCAGAGTCACTGCGTTGCAGTCGGGCTTGGGGTA...TTCAGCCCCAGCCCCTGAAACTTGGCAGTGTCCGTACAGACAAAGTAAGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp CCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAACACATTAGTGCACTaGGCCTCTCTGAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PGSGKPAPSQMLSRSCSENTLVH*ASLRSA
Trigger: TGCTGACCTCAGAGAGGCCCAGTGCACTAATGTGTT...TTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp TCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTACATGCACCAGATTCTaGCTCGAAGCAGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: SAPRQSQRHADGCACWLLTCTRF*LEAATE
Trigger: CTCAGTGGCTGCTTCGAGCCAGAATCTGGTGCATGT...AAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GTCACCTTACTTAAAGGGTGTGCCCTTATCTCGTCCTGGGGGAGGGGCACAGGTTCCTGTGCTGGGGTATaGATTCTCTGGCCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: VTLLKGCALISSWGRGTGSCAGV*ILWPPL
Trigger: TAGAGGAGGCCAGAGAATCCATACCCCAGCACAGGA...ACCTGTGCCCCTCCCCCAGGACGAGATAAGGGCACACCCTTTAAGTAAGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CAA 72 bp GCCAGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTaGAGATCTTTGTTCCCTGAGGTGCCAGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: ASWRMFTGSGLT*RSLFPEVPGRQ
Trigger: TTGCCTGCCTGGCACCTCAGGGAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp TGCCCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGGGAGCCTTTACAAGATaGTTATACAGGGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: CPGLQIKSTAKCGGGGGGGAFTR*LYRVAD
Trigger: ATCTGCAACCCTGTATAATCATCTTGTAAAGGCTCC...CCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp GGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCAAGAAGGCGGGGAGCAACTGTAACAACAGGGTaGGAAATGACCAAACTGCCC +
Preference number: 4 (lower is better)
Translates to: GCGDRVLRNVVTARRRGATVTTG*EMTKLP
Trigger: GGGCAGTTTGGTCATTTCTCACCCTGTTGTTACAGT...TGCTCCCCGCCTTCTTGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp TCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTGAAATCCCTCTGATCTaGCAAGCTCAGCAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: SAPRQSQRHADGCACWLLEIPLI*QAQQLD
Trigger: GTCCAACTGCTGAGCTTGTCAGATCAGAGGGATTTC...AAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp TGCCCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGGGATGTGTCTTACTGTaGTTCAACTTCCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: CPGLQIKSTAKCGGGGGGGCVLL*FNFPRN
Trigger: ATTCCTTGGGAAGTTGAAGCACAGTAAGACACATCC...CCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp GGCGAGCTGAGGACTTACTTTGTCTGTACGGACACTGCCAAGTTTCAGGGGCTGCTTTGTTCCCTGAGGTaGCAGGCAGGCAACTTTAGC +
Preference number: 4 (lower is better)
Translates to: GELRTYFVCTDTAKFQGLLCSLR*QAGNFS
Trigger: GCTAAAGTTGCCTGCCTGGCACCTCAGGGAACAAAG...CAGCCCCTGAAACTTGGCAGTGTCCGTACAGACAAAGTAAGTCCTCAGCTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp ACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACACCAAGTGTCTGTACGGACACTaGCAAGTTTCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TSVACGHAQVRSVFLDTKCLYGH*QVSGAG
Trigger: CCCAGCCCCTGAAACTTGGCAGTGTCCGTACAGACA...CTTGGTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGGGTGCATGCAGAGGCTCCTaGATCTGGGAAGCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: GNDSISHRGILVNEAERGACRGS*IWEARP
Trigger: GGGGCGGGCTTCCCAGATCCAGGAGCCTCTGCATGC...ACCCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp GTCACCTTACTTAAAGGGTGTGCCCTTATCTCGTCCTGGGGGAGGGGCACAGGTGATTGCTGGAGTGATTaGGGCCCGAAAACCTCAGTA +
Preference number: 4 (lower is better)
Translates to: VTLLKGCALISSWGRGTGDCWSD*GPKTSV
Trigger: TACTGAGGTTTTCGGGCCCCAATCACTCCAGCAATC...ACCTGTGCCCCTCCCCCAGGACGAGATAAGGGCACACCCTTTAAGTAAGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp GGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGGGTGTTGGGGTCCTGGGATaGGTTGCCCCGGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GNDSISHRGILVNEAERGVGVLG*VAPGCK
Trigger: TTTGCAGCCCGGGGCAACTCATCCCAGGACCCCAAC...ACCCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp CGGCCTTTCACCTCTTCCTTGATTACTCACACATCTTTGCGTTCTCCCCTGCCGCCCCCTCACAAATGCTaGGCCGTTCTTGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: RPFTSSLITHTSLRSPLPPPHKC*AVLALK
Trigger: TTTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGG...CGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp ACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACACCAAGGATCTTCCCCAGAGGTaGGGGGACTTGGACTTAAGA +
Preference number: 4 (lower is better)
Translates to: TSVACGHAQVRSVFLDTKDLPQR*GDLDLR
Trigger: TCTTAAGTCCAAGTCCCCTCACCTCTGGGGAAGATC...CTTGGTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp TTAGACTCAGGCCCCTTAGCTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCCGACTGCAACGCAGTaGCTCTGGGAAGCAACCCAG +
Preference number: 4 (lower is better)
Translates to: LDSGPLASFPTKPTLSTKPTATQ*LWEATQ
Trigger: CTGGGTTGCTTCCCAGAGTCACTGCGTTGCAGTCGG...CTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAGCTAAGGGGCCTGAGTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp CATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCAGACACAGATGGAAGGGACACGTACATGGCAGCTaGAGGGCTCAGCGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: HSCVDNAVFALCRHRWKGHVHGS*RAQRRL
Trigger: GAGGCGACGCTGAGCCCTGCAGCTGCCATGTACGTG...TCCCTTCCATCTGTGTCTGCACAGAGCAAACACAGCATTATCTACACAGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp ACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACACCAAGTCACCGCTTCCTTCTTaGCTGCAGCTCCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: TSVACGHAQVRSVFLDTKSPLPS*LQLLLK
Trigger: CTTCAGTAGGAGCTGCAGGCAAGAAGGAAGCGGTGA...CTTGGTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp CTCCCCTGCCGTCCTTCAACTGTATCTTACTTTTCTTACCAGAAAGGAATGGAGAGAGGCTCCTGGATCTaGGAAGCCCGCCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: LPCRPSTVSYFSYQKGMERGSWI*EARPLT
Trigger: TGTGAGGGGGCGGGCTTCCCAGATCCAGGAGCCTCT...CTCCATTCCTTTCTGGTAAGAAAAGTAAGATACAGTTGAAGGACGGCAGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp GAGCTGCTGTCTCACCCAGCAGCCATGGTTCTAGCTATCACACTCTCCAGGGAACAGAAGCTCTGTGCCTaGTCTGTAACAGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ELLSHPAAMVLAITLSREQKLCA*SVTVSR
Trigger: CCTGGAAACTGTTACAGACCAGGCACAGAGCTTCTG...TTCCCTGGAGAGTGTGATAGCTAGAACCATGGCTGCTGGGTGAGACAGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp TCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTGCATGTTGGCTTCTTTaGACCTGCACTGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: SAPRQSQRHADGCACWLLACWLL*TCTGGF
Trigger: AAATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGC...AAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp AGAGCTGGCCGGGGAATGCCCTCCTCATACCCCAAGCCCGACTGCAACGCAGTGGACAAGCTCAGCAGTTaGACAATTATTCTGATGTTT +
Preference number: 4 (lower is better)
Translates to: RAGRGMPSSYPKPDCNAVDKLSS*TIILMF
Trigger: AAACATCAGAATAATTGTCCAACTGCTGAGCTTGTC...CACTGCGTTGCAGTCGGGCTTGGGGTATGAGGAGGGCATTCCCCGGCCAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp TTAGACTCAGGCCCCTTAGCTTCATTTCCAACTAAGCCCACGCTATCAACCAAGTCCACCCAGTCTGTGTaGCACAGCTGCACCTCGCCA +
Preference number: 4 (lower is better)
Translates to: LDSGPLASFPTKPTLSTKSTQSV*HSCTSP
Trigger: TGGCGAGGTGCAGCTGTGCCACACAGACTGGGTGGA...CTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAGCTAAGGGGCCTGAGTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp CTGGAGACAAAGAATCTACATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCGGTGATGGAGCGGGGTaGGGAGCCCCTGCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: LETKNLHSCVDNAVFALCGDGAG*GAPASR
Trigger: CCTAGAGGCAGGGGCTCCCCACCCCGCTCCATCACC...GCACAGAGCAAACACAGCATTATCTACACAGGAATGTAGATTCTTTGTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp CTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCCAAACAGAGGAAATCAGTGAAGCAGGGGCAGCCTaGCTGCGGCTATGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LHFQLSPRYQPSQTEEISEAGAA*LRLWSG
Trigger: GCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTC...ACTGATTTCCTCTGTTTGGCTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CAA 72 bp ACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTaGGCTTCTTTGGACCTGCACTGGAGGATTTCTCAG +
Preference number: 4 (lower is better)
Translates to: TPIPKACRWLCM*ASLDLHWRISQ
Trigger: CTGAGAAATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CAA 72 bp ACTCTGGGAAGCAACCCAGCCTTCACTCTAGTTGTTTaGTCCCCGCATCCTGTGCTGGGGTATGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: TLGSNPAFTLVV*SPHPVLGYGFS
Trigger: AGAGAATCCATACCCCAGCACAGGATGCGGGGACAAAACAACTAGAGTGAAGGCTGGGTTGCTTCCCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp TGCCCCGGGCTGCAAATTAAGAGTACAGCTAAGTGCGGGGGTGGCGGTGGAGGGAGTTTAACAAATAACTaGCTACCACTCACTCATGCA +
Preference number: 4 (lower is better)
Translates to: CPGLQIKSTAKCGGGGGGSLTNN*LPLTHA
Trigger: TGCATGAGTGAGTGGTAGTCAGTTATTTGTTAAACT...CCCTCCACCGCCACCCCCGCACTTAGCTGTACTCTTAATTTGCAGCCCGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp CTGGAGACAAAGAATCTACATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCTTCAGGGGCTGGGGCTaGACTGAGGGCTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LETKNLHSCVDNAVFALCFRGWG*TEGSCW
Trigger: CCAGCAGGAGCCCTCAGTTCAGCCCCAGCCCCTGAA...GCACAGAGCAAACACAGCATTATCTACACAGGAATGTAGATTCTTTGTCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp GTTAACATCAAACCCAGACTTCTGAGTCTGAAAAAGAGCTGGCCGGGGAATGCCCTAAGGGCAGAAGCTTaGGGCTTTGCCTGCACGCTT +
Preference number: 4 (lower is better)
Translates to: VNIKPRLLSLKKSWPGNALRAEA*GFACTL
Trigger: AAGCGTGCAGGCAAAGCCTCAAGCTTCTGCCCTTAG...GGCATTCCCCGGCCAGCTCTTTTTCAGACTCAGAAGTCTGGGTTTGATGTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp GGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGGGTCTCCGCATGGGTGCATaGAGAGGCTCCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: GNDSISHRGILVNEAERGLRMGA*RGSWIW
Trigger: CCAGATCCAGGAGCCTCTGCATGCACCCATGCGGAG...ACCCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp CTAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGGTGCGGGGGTGGCGGTaGAGGGAACGAAAATTGAAC +
Preference number: 4 (lower is better)
Translates to: LGVPMNPVKFYTKSCIQEVRGWR*RERKLN
Trigger: GTTCAATTTTCGTTCCCTCCACCGCCACCCCCGCAC...CTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp GCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTGCGGCCTTACTGACCAGACTTGTTaGGGTCCTGGGATGAGTTGC +
Preference number: 4 (lower is better)
Translates to: ACEASILERGALKVRCGLTDQTC*GPGMSC
Trigger: GCAACTCATCCCAGGACCCCAACAAGTCTGGTCAGT...AAGGCCGCACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp ACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACACCAAGCTGGAGAATGTTCACTaGTTCGGGGCTGACTTTGAG +
Preference number: 4 (lower is better)
Translates to: TSVACGHAQVRSVFLDTKLENVH*FGADFE
Trigger: CTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAG...CTTGGTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp CTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCCAAACAGAGGAAATCAGTGCTGCGGCTATGGAGTaGCGGCTGCTTCACCGCTTC +
Preference number: 4 (lower is better)
Translates to: LHFQLSPRYQPSQTEEISAAAME*RLLHRF
Trigger: GAAGCGGTGAAGCAGCCGCCACTCCATAGCCGCAGC...ACTGATTTCCTCTGTTTGGCTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp CTTAACCGGTGGCCTCATCACCAGAGCATCGCCAGGATTTCTAATGCACTCAGTTGCACTGGGCCTCTCTaGGGTCAGCATATTTGTACT +
Preference number: 4 (lower is better)
Translates to: LNRWPHHQSIARISNALSCTGPL*GQHICT
Trigger: AGTACAAATATGCTGACCTCAGAGAGGCCCAGTGCA...ACTGAGTGCATTAGAAATCCTGGCGATGCTCTGGTGATGAGGCCACCGGTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp ACCAGAGCATCGCCAGGATTTCTAATGCACTCAGTTTCCCTACATAGCAGGGATTGCAGATTGGGTGACTaGCCAGACTTGTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TRASPGFLMHSVSLHSRDCRLGD*PDLLGS
Trigger: GGACCCCAACAAGTCTGGTCAGTCACCCAATCTGCA...ATCCCTGCTATGTAGGGAAACTGAGTGCATTAGAAATCCTGGCGATGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp CTAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGGAGCCGTTCTTGCTCTaGAACTGCGTGAGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: LGVPMNPVKFYTKSCIQEEPFLL*NCVSQG
Trigger: GCCTTGACTCACGCAGTTTCAGAGCAAGAACGGCTC...CTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp AGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTCCCTGAGGTGAATGCCGTGGCCTaGTCAACGTCAAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SWRMFTGSGLTLRSLFPEVNAVA*STSKAK
Trigger: CTTTGCCTTTGACGTTGATCAGGCCACGGCATTCAC...CTCAGGGAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp TCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTGTGAGTCAAGGCAAATaGAAAAAGCCAGGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: SACAVSCGFISPRKGRCIVSQGK*KKPGFG
Trigger: CCCAAAACCTGGCTTTTTGCATTTGCCTTGACTCAC...AATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp CTTAACCGGTGGCCTCATCACCAGAGCATCGCCAGGATTTCTAATGCACTCAGTTTACTCACACATCTTTaGGTTCTCCCCTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LNRWPHHQSIARISNALSLLTHL*VLPCRP
Trigger: AGGACGGCAGGGGAGAACGCAAAGATGTGTGAGTAA...ACTGAGTGCATTAGAAATCCTGGCGATGCTCTGGTGATGAGGCCACCGGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp GTTAACATCAAACCCAGACTTCTGAGTCTGAAAAAGAGCTGGCCGGGGAATGCCCTTGGACTTAAGAGCTaGTGTCTCACCCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VNIKPRLLSLKKSWPGNALGLKS*CLTQQP
Trigger: TGGCTGCTGGGTGAGACAGCAGCTCTTAAGTCCAAG...GGCATTCCCCGGCCAGCTCTTTTTCAGACTCAGAAGTCTGGGTTTGATGTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGGGTGGGCATCATTCCCACTaGGTATGCAGGGGCAGAACC +
Preference number: 4 (lower is better)
Translates to: GNDSISHRGILVNEAERGGHHSH*VCRGRT
Trigger: GGTTCTGCCCCTGCATACCCAGTGGGAATGATGCCC...ACCCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp CCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAAAATGGCTTCCTGCCTaGGTGATTTATAGAAGGATT +
Preference number: 4 (lower is better)
Translates to: PGSGKPAPSQMLSRSCSEKWLPA*VIYRRI
Trigger: AATCCTTCTATAAATCACCCAGGCAGGAAGCCATTT...TTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp GAAGGCACTATTTTGAAAGAATGCTGCACAGGTATGGCAACAGCCCCAAGCACAAGGATCTACTCCGCATaGGTGCATGCAGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EGTILKECCTGMATAPSTRIYSA*VHAEAP
Trigger: AGGAGCCTCTGCATGCACCCATGCGGAGTAGATCCT...TGTGCTTGGGGCTGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp CTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCCAAACAGAGGAAATCAGTACTCCCTCTCCCTGGTaGGCCAGGCAGCCTCAACTT +
Preference number: 4 (lower is better)
Translates to: LHFQLSPRYQPSQTEEISTPSPW*ARQPQL
Trigger: AAGTTGAGGCTGCCTGGCCCACCAGGGAGAGGGAGT...ACTGATTTCCTCTGTTTGGCTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp TTAGACTCAGGCCCCTTAGCTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCTGTCTAGCACGGATTaGAGACTCCCTCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LDSGPLASFPTKPTLSTKLSSTD*RLPLPG
Trigger: ACCAGGGAGAGGGAGTCTCCAATCCGTGCTAGACAG...CTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAGCTAAGGGGCCTGAGTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp TTAGACTCAGGCCCCTTAGCTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCCCACATTGGTGTCATaGTGGAGTTCAGCATCGCCC +
Preference number: 4 (lower is better)
Translates to: LDSGPLASFPTKPTLSTKPTLVS*WSSASP
Trigger: GGGCGATGCTGAACTCCACCATGACACCAATGTGGG...CTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAGCTAAGGGGCCTGAGTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CAA 72 bp CCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTaGGACCTGCACTGGAGGATTTCTCAGACACATGCA +
Preference number: 4 (lower is better)
Translates to: PKACRWLCMLAS*DLHWRISQTHA
Trigger: TGCATGTGTCTGAGAAATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp CTGGAGAGCTTCAAAACTAGAAGGATCTACTCCGCATGGGTGCATGCAGAGGCTGCCCGTGACTTTTTCTaGATGGACTTCATAACCGGA +
Preference number: 4 (lower is better)
Translates to: LESFKTRRIYSAWVHAEAARDFF*MDFITG
Trigger: TCCGGTTATGAAGTCCATTCAGAAAAAGTCACGGGC...AGCCTCTGCATGCACCCATGCGGAGTAGATCCTTCTAGTTTTGAAGCTCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp AGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTCCCTGAGCTCAAGCCCAAGAGGTaGAATTCAGCTGACTGTCCT +
Preference number: 4 (lower is better)
Translates to: SWRMFTGSGLTLRSLFPELKPKR*NSADCP
Trigger: AGGACAGTCAGCTGAATTTCACCTCTTGGGCTTGAG...CTCAGGGAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp GGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGGGTTGGTGGGCCTGGCAATaGCAGCATTTCTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: GNDSISHRGILVNEAERGWWAWQ*QHFSQR
Trigger: CCTCTGTGAGAAATGCTGTCATTGCCAGGCCCACCA...ACCCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569774.6
CDS-3UTR GCA 90 bp CGGCCTTTCACCTCTTCCTTGATTACTCACACATCTTTGCGTTCTCCCCTGCCGCTTCCCTCCAGTGTATaGTCTGCCTTTTTAACCACT +
Preference number: 4 (lower is better)
Translates to: RPFTSSLITHTSLRSPLPLPSSV*SAFLTT
Trigger: AGTGGTTAAAAAGGCAGAGCATACACTGGAGGGAAG...CGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp CATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCAGACACAGATGGAAGGGATGTCCCCGCATCCTGTaGTGGGGTATGGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: HSCVDNAVFALCRHRWKGCPRIL*WGMDSL
Trigger: CAGAGAATCCATACCCCAGCACAGGATGCGGGGACA...TCCCTTCCATCTGTGTCTGCACAGAGCAAACACAGCATTATCTACACAGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp CTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCCAAACAGAGGAAATCAGTTGGGGGCTCTGGAGATaGAAGGATCTGACCCACAGC +
Preference number: 4 (lower is better)
Translates to: LHFQLSPRYQPSQTEEISWGLWR*KDLTHS
Trigger: GCTGTGGGTCAGATCCTTGCATCTCCAGAGCCCCCA...ACTGATTTCCTCTGTTTGGCTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp CAGGTATGGCAACAGCCCCAAGCACATTCCTTCCTCACGAGTCCCAGGTCCAGCATAATAGAAATCAAATaGCTTCCTGCCTGGGTGATT +
Preference number: 4 (lower is better)
Translates to: QVWQQPQAHSFLTSPRSSIIEIK*LPAWVI
Trigger: AATCACCCAGGCAGGAAGCCATTTGATTTCTATTAT...GCTGGACCTGGGACTCGTGAGGAAGGAATGTGCTTGGGGCTGTTGCCATACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp ACCTCAGTGGCCTGTGGGCACGCACAAGTGAGGTCTGTTTTTCTAGACACCAAGTCTTTGGACCTGCACTaGAGGATTTCTCAGACACAT +
Preference number: 4 (lower is better)
Translates to: TSVACGHAQVRSVFLDTKSLDLH*RISQTH
Trigger: ATGTGTCTGAGAAATCCTCCAGTGCAGGTCCAAAGA...CTTGGTGTCTAGAAAAACAGACCTCACTTGTGCGTGCCCACAGGCCACTGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp CTTATGGGGTCAGCTGGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCACAGTGTAAAGAAATATaGTTTGAGGTGGTGCATGCA +
Preference number: 4 (lower is better)
Translates to: LMGSAGCGDRVLRNVVTAQCKEI*FEVVHA
Trigger: TGCATGCACCACCTCAAATCATATTTCTTTACACTG...TGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCAGCTGACCCCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp CTGGAGAGCTTCAAAACTAGAAGGATCTACTCCGCATGGGTGCATGCAGAGGCTCAAACAAACAAACAGTaGCCTTCTCCATGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: LESFKTRRIYSAWVHAEAQTNKQ*PSPWVK
Trigger: CTTGACCCATGGAGAAGGTCACTGTTTGTTTGTTTG...AGCCTCTGCATGCACCCATGCGGAGTAGATCCTTCTAGTTTTGAAGCTCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp GGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGGGTGGAGGGAACGAAAATTaGACCTGTCTGCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GNDSISHRGILVNEAERGGGNEN*TCLPVL
Trigger: CAGCACAGGCAGACAGGTTCAATTTTCGTTCCCTCC...ACCCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp CGGCCTTTCACCTCTTCCTTGATTACTCACACATCTTTGCGTTCTCCCCTGCCGTGCCTTTTTAACCACTaGCATGTAAGGAGGACTACT +
Preference number: 4 (lower is better)
Translates to: RPFTSSLITHTSLRSPLPCLFNH*HVRRTT
Trigger: AGTAGTCCTCCTTACATGTCAGTGGTTAAAAAGGCA...CGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp GGCGAGCTGAGGACTTACTTTGTCTGTACGGACACTGCCAAGTTTCAGGGGCTGGAAATCAGTTTGGGTTaGATTCTTTGCTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: GELRTYFVCTDTAKFQGLEISLG*ILCWRQ
Trigger: TTGTCTCCAGCAAAGAATTCAACCCAAACTGATTTC...CAGCCCCTGAAACTTGGCAGTGTCCGTACAGACAAAGTAAGTCCTCAGCTCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp CGGCCTTTCACCTCTTCCTTGATTACTCACACATCTTTGCGTTCTCCCCTGCCGATTTTGAAAGAATGCTaGACAGGTATGGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: RPFTSSLITHTSLRSPLPILKEC*TGMATA
Trigger: GGCTGTTGCCATACCTGTGCAGCATTCTTTCAAAAT...CGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp CTGGAGAGCTTCAAAACTAGAAGGATCTACTCCGCATGGGTGCATGCAGAGGCTGAAAATCTCACTGGATaGGGCCGTTTTAAGAACGCT +
Preference number: 4 (lower is better)
Translates to: LESFKTRRIYSAWVHAEAENLTG*GRFKNA
Trigger: AGCGTTCTTAAAACGGCCCCATCCAGTGAGATTTTC...AGCCTCTGCATGCACCCATGCGGAGTAGATCCTTCTAGTTTTGAAGCTCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp GGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGGGTCTGTGCTGTGTCGTGTaGCTTTATCAGCCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: GNDSISHRGILVNEAERGLCCVV*LYQPEE
Trigger: TTCCTCGGGCTGATAAAGCCACACGACACAGCACAG...ACCCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp CTGGAGAGCTTCAAAACTAGAAGGATCTACTCCGCATGGGTGCATGCAGAGGCTCAAAAAGCCAGGTTTTaGGGATGTGTCTTACTGTGC +
Preference number: 4 (lower is better)
Translates to: LESFKTRRIYSAWVHAEAQKARF*GCVLLC
Trigger: GCACAGTAAGACACATCCCCAAAACCTGGCTTTTTG...AGCCTCTGCATGCACCCATGCGGAGTAGATCCTTCTAGTTTTGAAGCTCTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp CTTATGGGGTCAGCTGGCTGTGGGGATAGAGTCCTGAGGAATGTGGTCACAGCACTTACCAGAAAGGAATaGAGTCTGTTTAGAGACAAC +
Preference number: 4 (lower is better)
Translates to: LMGSAGCGDRVLRNVVTALTRKE*SLFRDN
Trigger: GTTGTCTCTAAACAGACTCCATTCCTTTCTGGTAAG...TGCTGTGACCACATTCCTCAGGACTCTATCCCCACAGCCAGCTGACCCCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp TTAGACTCAGGCCCCTTAGCTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCCAAAGGCATGCAGATaGCTGTGCATGTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LDSGPLASFPTKPTLSTKPKACR*LCMLAS
Trigger: AGAAGCCAACATGCACAGCCATCTGCATGCCTTTGG...CTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAGCTAAGGGGCCTGAGTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CAA 72 bp CGGCCTTTCACCTCTTCCTTGATTACTCACACATCTTaGCGTTCTCCCCTGCCGTCCTTCAACTGTATCTTA +
Preference number: 4 (lower is better)
Translates to: RPFTSSLITHTS*RSPLPSFNCIL
Trigger: TAAGATACAGTTGAAGGACGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp ACCAGAGCATCGCCAGGATTTCTAATGCACTCAGTTTCCCTACATAGCAGGGATGATAAAAGGGGGCCATaGATCTTGTGGTCTCCTACT +
Preference number: 4 (lower is better)
Translates to: TRASPGFLMHSVSLHSRDDKRGP*ILWSPT
Trigger: AGTAGGAGACCACAAGATTCATGGCCCCCTTTTATC...ATCCCTGCTATGTAGGGAAACTGAGTGCATTAGAAATCCTGGCGATGCTCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp GAATCTTGTGGTCTCCTACTTAGAGTTCAACTCCTTGGGTACTTGACCTTTGTAGGGTTGCAGATTGGGTaGCTGACCAGACTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: ESCGLLLRVQLLGYLTFVGLQIG*LTRLVG
Trigger: CCCAACAAGTCTGGTCAGTCACCCAATCTGCAACCC...TACAAAGGTCAAGTACCCAAGGAGTTGAACTCTAAGTAGGAGACCACAAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp GAAGAAGCATTGGAAGGCACTATTTTGAAAGAATGCTGCACAGGTATGGCAACAGCAGAGCCTTGCCTTTaGATGAGGCAGCTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: EEALEGTILKECCTGMATAEPCL*MRQLVR
Trigger: CCTCACAAGCTGCCTCATTCAAAGGCAAGGCTCTGC...TGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGTGCCTTCCAATGCTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp TTAGACTCAGGCCCCTTAGCTTCATTTCCAACTAAGCCCACGCTATCAACCAAGTGGCTTCTTTGGACCTaGACTGGAGGATTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LDSGPLASFPTKPTLSTKWLLWT*TGGFLR
Trigger: TCTGAGAAATCCTCCAGTGCAGGTCCAAAGAAGCCA...CTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAGCTAAGGGGCCTGAGTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp CATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCAGACACAGATGGAAGGGATCTGTGTGGCACAGCTaGACCTCGCCATCTATTATG +
Preference number: 4 (lower is better)
Translates to: HSCVDNAVFALCRHRWKGSVWHS*TSPSIM
Trigger: CATAATAGATGGCGAGGTGCAGCTGTGCCACACAGA...TCCCTTCCATCTGTGTCTGCACAGAGCAAACACAGCATTATCTACACAGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp CTCCCCTGCCGTCCTTCAACTGTATCTTACTTTTCTTACCAGAAAGGAATGGAGAATGCTGCACAGGTATaGCAACAGCCCCAAGCACAT +
Preference number: 4 (lower is better)
Translates to: LPCRPSTVSYFSYQKGMENAAQV*QQPQAH
Trigger: ATGTGCTTGGGGCTGTTGCCATACCTGTGCAGCATT...CTCCATTCCTTTCTGGTAAGAAAAGTAAGATACAGTTGAAGGACGGCAGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp GAAGGCACTATTTTGAAAGAATGCTGCACAGGTATGGCAACAGCCCCAAGCACATACAGGGTTGCAGATTaGGTGACTGACCAGACTTGT +
Preference number: 4 (lower is better)
Translates to: EGTILKECCTGMATAPSTYRVAD*VTDQTC
Trigger: ACAAGTCTGGTCAGTCACCCAATCTGCAACCCTGTA...TGTGCTTGGGGCTGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGTGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp TTAGACTCAGGCCCCTTAGCTTCATTTCCAACTAAGCCCACGCTATCAACCAAGTTCAGGCATAAACCATaGGCCTGTGATTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LDSGPLASFPTKPTLSTKFRHKP*ACDCWS
Trigger: ACTCCAGCAATCACAGGCCCATGGTTTATGCCTGAA...CTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAGCTAAGGGGCCTGAGTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR TCA 90 bp GAAGGCACTATTTTGAAAGAATGCTGCACAGGTATGGCAACAGCCCCAAGCACAAGAACACTAGCCATGTaGCAGTGCTATAAAACTCCC +
Preference number: 4 (lower is better)
Translates to: EGTILKECCTGMATAPSTRTLAM*QCYKTP
Trigger: GGGAGTTTTATAGCACTGTCACATGGCTAGTGTTCT...TGTGCTTGGGGCTGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGTGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp CTGGAGACAAAGAATCTACATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCTATCTGTCCCTACCATaGCAGGTGTTCTTCCCGCCT +
Preference number: 4 (lower is better)
Translates to: LETKNLHSCVDNAVFALCYLSLP*QVFFPP
Trigger: AGGCGGGAAGAACACCTGTCATGGTAGGGACAGATA...GCACAGAGCAAACACAGCATTATCTACACAGGAATGTAGATTCTTTGTCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CCA 90 bp GAATCTTGTGGTCTCCTACTTAGAGTTCAACTCCTTGGGTACTTGACCTTTGTATTTGTCAGGGGTGGGTaGGAGGTGCCTAATTACCCA +
Preference number: 4 (lower is better)
Translates to: ESCGLLLRVQLLGYLTFVFVRGG*EVPNYP
Trigger: TGGGTAATTAGGCACCTCCCACCCACCCCTGACAAA...TACAAAGGTCAAGTACCCAAGGAGTTGAACTCTAAGTAGGAGACCACAAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp CTGGAGACAAAGAATCTACATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCGCAGCATGCCCACATTaGTGTCATGGTGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LETKNLHSCVDNAVFALCAACPH*CHGGVQ
Trigger: CTGAACTCCACCATGACACCAATGTGGGCATGCTGC...GCACAGAGCAAACACAGCATTATCTACACAGGAATGTAGATTCTTTGTCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
3UTR CAA 72 bp GTGGGACATAAGGAAGAAGCATTGGAAGGCACTATTTaGAAAGAATGCTGCACAGGTATGGCAACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: VGHKEEALEGTI*KECCTGMATAP
Trigger: TGGGGCTGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGTGCCTTCCAATGCTTCTTCCTTATGTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp AGCTGGAGAATGTTCACTGGTTCGGGGCTGACTTTGAGATCTTTGTTCCCTGAGCCTCGCCATCTATTATaGAAGGTTTTAGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: SWRMFTGSGLTLRSLFPEPRHLL*KVLEIP
Trigger: AGGGATTTCTAAAACCTTTCATAATAGATGGCGAGG...CTCAGGGAACAAAGATCTCAAAGTCAGCCCCGAACCAGTGAACATTCTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp CTGGAGAGCTTCAAAACTAGAAGGATCTACTCCGCATGGGTGCATGCAGAGGCTACTATTTTGAAAGAATaGTGCACAGGTATGGCAACA +
Preference number: 4 (lower is better)
Translates to: LESFKTRRIYSAWVHAEATILKE*CTGMAT
Trigger: TGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGT...AGCCTCTGCATGCACCCATGCGGAGTAGATCCTTCTAGTTTTGAAGCTCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp GAAGGCACTATTTTGAAAGAATGCTGCACAGGTATGGCAACAGCCCCAAGCACATGTTTAGAGACAACTTaGACAACCTGTGAGTGCATC +
Preference number: 4 (lower is better)
Translates to: EGTILKECCTGMATAPSTCLETT*TTCECI
Trigger: GATGCACTCACAGGTTGTCCAAGTTGTCTCTAAACA...TGTGCTTGGGGCTGTTGCCATACCTGTGCAGCATTCTTTCAAAATAGTGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp CTGGAGACAAAGAATCTACATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCATGTGGCCAGCCGAATaGAAAGCACTGGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: LETKNLHSCVDNAVFALCMWPAE*KALENL
Trigger: CAAGTTCTCCAGTGCTTTCCATTCGGCTGGCCACAT...GCACAGAGCAAACACAGCATTATCTACACAGGAATGTAGATTCTTTGTCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR GCA 90 bp AGGGCCTTCAAACTTAATTTGTTCACTGAACAAGGCTATCTATCTATCTATCTCTCTACTCCGCATGGGTaGATGCAGAGGCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: RAFKLNLFTEQGYLSIYLSTPHG*MQRLLD
Trigger: ATCCAGGAGCCTCTGCATGCACCCATGCGGAGTAGA...GAGATAGATAGATAGATAGCCTTGTTCAGTGAACAAATTAAGTTTGAAGGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp AGGGCCTTCAAACTTAATTTGTTCACTGAACAAGGCTATCTATCTATCTATCTCTCTAGCATCAGCTTATaGGGTCAGCTGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RAFKLNLFTEQGYLSIYLSSISL*GQLAVG
Trigger: CCCCACAGCCAGCTGACCCCATAAGCTGATGCTAGA...GAGATAGATAGATAGATAGCCTTGTTCAGTGAACAAATTAAGTTTGAAGGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR TCA 90 bp GAATCTTGTGGTCTCCTACTTAGAGTTCAACTCCTTGGGTACTTGACCTTTGTAAACTTGGACAACCTGTaGGTGCATCTCTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: ESCGLLLRVQLLGYLTFVNLDNL*VHLFFP
Trigger: AGGAAAGAAGAGATGCACTCACAGGTTGTCCAAGTT...TACAAAGGTCAAGTACCCAAGGAGTTGAACTCTAAGTAGGAGACCACAAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp ACCAGAGCATCGCCAGGATTTCTAATGCACTCAGTTTCCCTACATAGCAGGGATTTCTACACAAAGTCTTaGATACAGGAGCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: TRASPGFLMHSVSLHSRDFYTKS*IQEPLQ
Trigger: TTGTAAAGGCTCCTGTATGCAAGACTTTGTGTAGAA...ATCCCTGCTATGTAGGGAAACTGAGTGCATTAGAAATCCTGGCGATGCTCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp CTAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGAAATATGATTTGAGGTaGTGCATGCAAGTAACTAGG +
Preference number: 4 (lower is better)
Translates to: LGVPMNPVKFYTKSCIQEKYDLR*CMQVTR
Trigger: CCTAGTTACTTGCATGCACCACCTCAAATCATATTT...CTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp AGGGCCTTCAAACTTAATTTGTTCACTGAACAAGGCTATCTATCTATCTATCTCGAACCTGTCTGCCTGTaGTGTGTCGTGTGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: RAFKLNLFTEQGYLSIYLEPVCL*CVVWLY
Trigger: ATAAAGCCACACGACACAGCACAGGCAGACAGGTTC...GAGATAGATAGATAGATAGCCTTGTTCAGTGAACAAATTAAGTTTGAAGGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp GAATCTTGTGGTCTCCTACTTAGAGTTCAACTCCTTGGGTACTTGACCTTTGTAAGGTGTATTCTAATTTaGACAAAGGTGCTGGGTAGA +
Preference number: 4 (lower is better)
Translates to: ESCGLLLRVQLLGYLTFVRCILI*TKVLGR
Trigger: TCTACCCAGCACCTTTGTGCAAATTAGAATACACCT...TACAAAGGTCAAGTACCCAAGGAGTTGAACTCTAAGTAGGAGACCACAAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp AGGGCCTTCAAACTTAATTTGTTCACTGAACAAGGCTATCTATCTATCTATCTCAAAATTGAACCTGTCTaGCTGTGCTGTGTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: RAFKLNLFTEQGYLSIYLKIEPV*LCCVVW
Trigger: CCACACGACACAGCACAGGCAGACAGGTTCAATTTT...GAGATAGATAGATAGATAGCCTTGTTCAGTGAACAAATTAAGTTTGAAGGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CCA 90 bp GAATCTTGTGGTCTCCTACTTAGAGTTCAACTCCTTGGGTACTTGACCTTTGTAATACCTAAGGTTTTCTaGCTTATTGAGGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: ESCGLLLRVQLLGYLTFVIPKVF*LIEEIS
Trigger: GGAAATTTCCTCAATAAGCCAGAAAACCTTAGGTAT...TACAAAGGTCAAGTACCCAAGGAGTTGAACTCTAAGTAGGAGACCACAAGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR GCA 90 bp AGGGCCTTCAAACTTAATTTGTTCACTGAACAAGGCTATCTATCTATCTATCTCTATGATTTGAGGTGGTaGATGCAAGTAACTAGGGTT +
Preference number: 4 (lower is better)
Translates to: RAFKLNLFTEQGYLSIYLYDLRW*MQVTRV
Trigger: AACCCTAGTTACTTGCATGCACCACCTCAAATCATA...GAGATAGATAGATAGATAGCCTTGTTCAGTGAACAAATTAAGTTTGAAGGCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
3UTR CAA 72 bp CTAAATAGTTGCGGGCCTGCGCTCAAAGCCAGGCCTTaGTTAATACTTTTAACAAAGTATTCTTTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: LNSCGPALKARP*LILLTKYSLLK
Trigger: TTTTAACAAAGAATACTTTGTTAAAAGTATTAACAAAGGCCTGGCTTTGAGCGCAGGCCCGCAACTATTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CAA 90 bp GGCGGCGATGGGTGGAGGGAACCCCACACCCTTCCTGAGAAGCAGGGGCAGCCTCTGACTTTGAGATCTTaGTTCCCTGAGGTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: GGDGWREPHTLPEKQGQPLTLRS*FPEVPG
Trigger: GCCTGGCACCTCAGGGAACAAAGATCTCAAAGTCAG...AGGCTGCCCCTGCTTCTCAGGAAGGGTGTGGGGTTCCCTCCACCCATCGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CAA 90 bp GGGGAGCCCCTGCCTCTAGGCCAGTCCACCCAGTCTGTGTGGCACAGCTGCACCTGCATGTTGGCTTCTTaGGACCTGCACTGGAGGATT +
Preference number: 5 (lower is better)
Translates to: GEPLPLGQSTQSVWHSCTCMLAS*DLHWRI
Trigger: AATCCTCCAGTGCAGGTCCAAAGAAGCCAACATGCA...GGTGCAGCTGTGCCACACAGACTGGGTGGACTGGCCTAGAGGCAGGGGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CAA 90 bp CTGAGAAGCAGGGGCAGCCTGGCTGCGGCTATGGAGTGGCGGCTGCTTCACCGCGCTTTGCCTGCACGCTaGGGTAACTGTAAACATCAT +
Preference number: 5 (lower is better)
Translates to: LRSRGSLAAAMEWRLLHRALPAR*GNCKHH
Trigger: ATGATGTTTACAGTTACCCAAGCGTGCAGGCAAAGC...GCGGTGAAGCAGCCGCCACTCCATAGCCGCAGCCAGGCTGCCCCTGCTTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CAA 90 bp AGAGCTGGCCGGGGAATGCCCTCCTCATACCCCAAGCCCGACTGCAACGCAGTGTTCACCGCTTCCTTCTaGCCTGCAGCTCCTACTGAA +
Preference number: 5 (lower is better)
Translates to: RAGRGMPSSYPKPDCNAVFTASF*PAAPTE
Trigger: TTCAGTAGGAGCTGCAGGCAAGAAGGAAGCGGTGAA...CACTGCGTTGCAGTCGGGCTTGGGGTATGAGGAGGGCATTCCCCGGCCAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CAA 90 bp CCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAGGGAGCAGCAGAGCCTaGCCTTTGAATGAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: PGSGKPAPSQMLSRSCSEGSSRA*PLNEAA
Trigger: AGCTGCCTCATTCAAAGGCAAGGCTCTGCTGCTCCC...TTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CAA 90 bp GAGCTGCTGTCTCACCCAGCAGCCATGGTTCTAGCTATCACACTCTCCAGGGAAGGCAGCATGCCCACATaGGTGTCATGGTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: ELLSHPAAMVLAITLSREGSMPT*VSWWSS
Trigger: TGAACTCCACCATGACACCAATGTGGGCATGCTGCC...TTCCCTGGAGAGTGTGATAGCTAGAACCATGGCTGCTGGGTGAGACAGCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CAA 90 bp GAGCTGCTGTCTCACCCAGCAGCCATGGTTCTAGCTATCACACTCTCCAGGGAATCTGTGATGGGCAGCTaGCTAAGATTAGACTCAGGC +
Preference number: 5 (lower is better)
Translates to: ELLSHPAAMVLAITLSRESVMGS*LRLDSG
Trigger: GCCTGAGTCTAATCTTAGCAAGCTGCCCATCACAGA...TTCCCTGGAGAGTGTGATAGCTAGAACCATGGCTGCTGGGTGAGACAGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS TCA 90 bp AGAAAGTGTGTAGCACTTCCCCCTTCACTCTCTCCTGCTGCCATGTaGAGACGTGCTTGCTTCCCCTTCATGTTCCAGTACGATTGTAAG +
Preference number: 5 (lower is better)
Translates to: RKCVALPPSLSPAAM*RRACFPFMFQYDCK
Trigger: CTTACAATCGTACTGGAACATGAAGGGGAAGCAAGCACGTCTTCACATGGCAGCAGGAGAGAGTGAAGGGGGAAGTGCTACACACTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401491.7
CDS-3UTR CAA 90 bp CCTGGATCTGGGAAGCCCGCCCCCTCACAAATGCTGAGCCGTTCTTGCTCTGAAGTAAAGAAATATGATTaGAGGTGGTGCATGCAAGTA +
Preference number: 5 (lower is better)
Translates to: PGSGKPAPSQMLSRSCSEVKKYD*RWCMQV
Trigger: TACTTGCATGCACCACCTCAAATCATATTTCTTTAC...TTCAGAGCAAGAACGGCTCAGCATTTGTGAGGGGGCGGGCTTCCCAGATCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CAA 90 bp CATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCAGACACAGATGGAAGGGATCTAAGGGCAGAAGCTaGAGGCTTTGCCTGCACGCT +
Preference number: 5 (lower is better)
Translates to: HSCVDNAVFALCRHRWKGSKGRS*RLCLHA
Trigger: AGCGTGCAGGCAAAGCCTCAAGCTTCTGCCCTTAGA...TCCCTTCCATCTGTGTCTGCACAGAGCAAACACAGCATTATCTACACAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CAA 90 bp TCTGCCTGTGCTGTGTCGTGTGGCTTTATCAGCCCGAGGAAGGGCAGGTGTATTCAACTTCCCAAGGAATaGAAAGTCAACCTAACTGTA +
Preference number: 5 (lower is better)
Translates to: SACAVSCGFISPRKGRCIQLPKE*KVNLTV
Trigger: TACAGTTAGGTTGACTTTCAATTCCTTGGGAAGTTG...AATACACCTGCCCTTCCTCGGGCTGATAAAGCCACACGACACAGCACAGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CAA 90 bp CCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGATTACTCACACATCTTaGCGTTCTCCCCTGCCGTCC +
Preference number: 5 (lower is better)
Translates to: PGNDSISHRGILVNEAERITHTS*RSPLPS
Trigger: GGACGGCAGGGGAGAACGCAAAGATGTGTGAGTAAT...CCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CAA 90 bp GGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGGGTAGCAGAGCCTTGCCTTaGAATGAGGCAGCTTGTGAG +
Preference number: 5 (lower is better)
Translates to: GNDSISHRGILVNEAERGSRALP*NEAACE
Trigger: CTCACAAGCTGCCTCATTCAAAGGCAAGGCTCTGCT...ACCCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CAA 90 bp TCCGCCCCACGCCAATCCCAAAGGCATGCAGATGGCTGTGCATGTTGGCTTCTTCTCAAAGCCAGGCCTTaGTTAATACTTTTAACAAAG +
Preference number: 5 (lower is better)
Translates to: SAPRQSQRHADGCACWLLLKARP*LILLTK
Trigger: CTTTGTTAAAAGTATTAACAAAGGCCTGGCTTTGAG...AAGAAGCCAACATGCACAGCCATCTGCATGCCTTTGGGATTGGCGTGGGGCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CAA 90 bp GAGGACTTACTTTGTCTGTACGGACACTGCCAAGTTTCAGGGGCTGGGGCTGAAGGAAATCAGTTTGGGTaGAATTCTTTGCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: EDLLCLYGHCQVSGAGAEGNQFG*NSLLET
Trigger: TGTCTCCAGCAAAGAATTCAACCCAAACTGATTTCC...TTCAGCCCCAGCCCCTGAAACTTGGCAGTGTCCGTACAGACAAAGTAAGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CAA 90 bp CCTGGCAATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGTGGAGGGAACGAAAATaGAACCTGTCTGCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: PGNDSISHRGILVNEAERWRERK*NLSACA
Trigger: AGCACAGGCAGACAGGTTCAATTTTCGTTCCCTCCA...CCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATTGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CAA 90 bp GCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTGCGGCCTTGTTCTACACAAAGTCTaGCATACAGGAGCCTTTACA +
Preference number: 5 (lower is better)
Translates to: ACEASILERGALKVRCGLVLHKV*HTGAFT
Trigger: TGTAAAGGCTCCTGTATGCAAGACTTTGTGTAGAAC...AAGGCCGCACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CAA 90 bp CTTCATTTCCAACTAAGCCCACGCTATCAACCAAGCCAAACAGAGGAAATCAGTGGTTCGGGGCTGACTTaGAGATCTTTGTTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: LHFQLSPRYQPSQTEEISGSGLT*RSLFPE
Trigger: CTCAGGGAACAAAGATCTCAAAGTCAGCCCCGAACC...ACTGATTTCCTCTGTTTGGCTTGGTTGATAGCGTGGGCTTAGTTGGAAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CAA 90 bp CTGGAGACAAAGAATCTACATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCCAGAAGCTTGAGGCTTaGCCTGCACGCTTGGGTAAC +
Preference number: 5 (lower is better)
Translates to: LETKNLHSCVDNAVFALCQKLEA*PARLGN
Trigger: GTTACCCAAGCGTGCAGGCAAAGCCTCAAGCTTCTG...GCACAGAGCAAACACAGCATTATCTACACAGGAATGTAGATTCTTTGTCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CAA 90 bp CATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCAGACACAGATGGAAGGGATTCACTCTAGTTGTTTaGTCCCCGCATCCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: HSCVDNAVFALCRHRWKGFTLVV*SPHPVL
Trigger: CAGCACAGGATGCGGGGACAAAACAACTAGAGTGAA...TCCCTTCCATCTGTGTCTGCACAGAGCAAACACAGCATTATCTACACAGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CAA 90 bp CGGCCTTTCACCTCTTCCTTGATTACTCACACATCTTTGCGTTCTCCCCTGCCGGCCTTCAAACTTAATTaGTTCACTGAACAAGGCTAT +
Preference number: 5 (lower is better)
Translates to: RPFTSSLITHTSLRSPLPAFKLN*FTEQGY
Trigger: ATAGCCTTGTTCAGTGAACAAATTAAGTTTGAAGGC...CGGCAGGGGAGAACGCAAAGATGTGTGAGTAATCAAGGAAGAGGTGAAAGGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CAA 90 bp CATTCCTGTGTAGATAATGCTGTGTTTGCTCTGTGCAGACACAGATGGAAGGGACCAGGTAAAGACCTATaGGGGAAGCAGTTGACTAAG +
Preference number: 5 (lower is better)
Translates to: HSCVDNAVFALCRHRWKGPGKDL*GKQLTK
Trigger: CTTAGTCAACTGCTTCCCCAATAGGTCTTTACCTGG...TCCCTTCCATCTGTGTCTGCACAGAGCAAACACAGCATTATCTACACAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CAA 90 bp GAGGACTTACTTTGTCTGTACGGACACTGCCAAGTTTCAGGGGCTGGGGCTGAATTTGGGTTGAATTCTTaGCTGGAGACAAAGAATCTA +
Preference number: 5 (lower is better)
Translates to: EDLLCLYGHCQVSGAGAEFGLNS*LETKNL
Trigger: TAGATTCTTTGTCTCCAGCAAAGAATTCAACCCAAA...TTCAGCCCCAGCCCCTGAAACTTGGCAGTGTCCGTACAGACAAAGTAAGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562383.6
CDS-3UTR CAA 90 bp GCTTGTGAGGCAAGCATTCTGGAGAGAGGTGCTTTGAAAGTAAGGTGCGGCCTTCTGTTACTTTTTGCCTaGTCTGGCATGTTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: ACEASILERGALKVRCGLLLLFA*SGMFVL
Trigger: TAAAACAAACATGCCAGACAAGGCAAAAAGTAACAG...AAGGCCGCACCTTACTTTCAAAGCACCTCTCTCCAGAATGCTTGCCTCACAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CAA 90 bp GGAATTGAAAGTCAACCTAACTGTAACAACAGGGTGAGAAATGACCAAACTGCCGCAAAAAGCCAGGTTTaGGGGATGTGTCTTACTGTG +
Preference number: 5 (lower is better)
Translates to: GIESQPNCNNRVRNDQTAAKSQV*GMCLTV
Trigger: CACAGTAAGACACATCCCCAAAACCTGGCTTTTTGC...GGCAGTTTGGTCATTTCTCACCCTGTTGTTACAGTTAGGTTGACTTTCAATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CAA 90 bp AATGACAGCATTTCTCACAGAGGCATTCTGGTAAATGAAGCTGAAAGGGGTGTTACCATTTATCTCAGCTaGCTGATAAAAGGGGGCCAT +
Preference number: 5 (lower is better)
Translates to: NDSISHRGILVNEAERGVTIYLS*LIKGGH
Trigger: ATGGCCCCCTTTTATCAGCAAGCTGAGATAAATGGT...AACACCCCTTTCAGCTTCATTTACCAGAATGCCTCTGTGAGAAATGCTGTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS-3UTR CAA 90 bp CTAGGTGTCCCCATGAACCCCGTAAAGTTCTACACAAAGTCTTGCATACAGGAGCTGAGGTCAGCATATTaGTACTCTTGGAATATTTGT +
Preference number: 5 (lower is better)
Translates to: LGVPMNPVKFYTKSCIQELRSAY*YSWNIC
Trigger: ACAAATATTCCAAGAGTACAAATATGCTGACCTCAG...CTCCTGTATGCAAGACTTTGTGTAGAACTTTACGGGGTTCATGGGGACACCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394688.8
CDS TCA 72 bp GTAGCACTTCCCCCTTCACTCTCTCCTGCTGCCATGTaGAGACGTGCTTGCTTCCCCTTCATGTTCCAGTAC +
Preference number: 6 (lower is better)
Translates to: VALPPSLSPAAM*RRACFPFMFQY
Trigger: GTACTGGAACATGAAGGGGAAGCAAGCACGTCTTCACATGGCAGCAGGAGAGAGTGAAGGGGGAAGTGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401491.7
CDS TCA 72 bp ACCAAACACCGCACGTTCTCCCTCATAGGTGGGAATTaGACAATGAGAACACCTGGACACAGGGTGGGGAAC +
Preference number: 6 (lower is better)
Translates to: TKHRTFSLIGGN*TMRTPGHRVGN
Trigger: GTTCCCCACCCTGTGTCCAGGTGTTCTCATTGTTCAATTCCCACCTATGAGGGAGAACGTGCGGTGTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401491.7
CDS GCA 72 bp AAGAAAGTGTGTAGCACTTCCCCCTTCACTCTCTCCTaGTGCCATGTGAAGACGTGCTTGCTTCCCCTTCAT +
Preference number: 6 (lower is better)
Translates to: KKVCSTSPFTLS*CHVKTCLLPLH
Trigger: ATGAAGGGGAAGCAAGCACGTCTTCACATGGCAGCAGGAGAGAGTGAAGGGGGAAGTGCTACACACTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401491.7
CDS CAA 72 bp AACCAAACACCGCACGTTCTCCCTCATAGGTGGGAATaGAACAATGAGAACACCTGGACACAGGGTGGGGAA +
Preference number: 6 (lower is better)
Translates to: NQTPHVLPHRWE*NNENTWTQGGE
Trigger: TTCCCCACCCTGTGTCCAGGTGTTCTCATTGTTCAATTCCCACCTATGAGGGAGAACGTGCGGTGTTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401491.7
CDS CCA 72 bp CTTGGGTCTCTCCAGCCATGTGTCCTGTACAGCCTGTaGAACTGTGAGTTAATCAAAGCTCTTTTCTTCATA +
Preference number: 6 (lower is better)
Translates to: LGSLQPCVLYSL*NCELIKALFFI
Trigger: TATGAAGAAAAGAGCTTTGATTAACTCACAGTTCCACAGGCTGTACAGGACACATGGCTGGAGAGACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401491.7
CDS CCA 72 bp CATAAAAAGGATGAGTTCATGTCCTTTGTAGGGACATaGATGAAGCTGTTTCTGAGCAAACTATGGCAAGGA +
Preference number: 6 (lower is better)
Translates to: HKKDEFMSFVGT*MKLFLSKLWQG
Trigger: TCCTTGCCATAGTTTGCTCAGAAACAGCTTCATCCATGTCCCTACAAAGGACATGAACTCATCCTTTTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401491.7