RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000204256, ENSG00000215077, ENSG00000230678, ENSG00000234507, ENSG00000234704

Ensembl transcript IDs: ENST00000374825.9, ENST00000374831.8, ENST00000383108.6, ENST00000395287.5, ENST00000399527.5, ENST00000399528.5, ENST00000399529.7, ENST00000412535.5, ENST00000414731.6, ENST00000416727.5, ENST00000424160.5, ENST00000425016.5, ENST00000425201.5, ENST00000427021.3, ENST00000429833.5, ENST00000433783.5, ENST00000436979.5, ENST00000438194.6, ENST00000439194.3, ENST00000442219.5, ENST00000442863.5, ENST00000446150.3, ENST00000447730.5, ENST00000448067.5, ENST00000449025.5, ENST00000449085.4, ENST00000449118.5, ENST00000450284.5, ENST00000450320.5, ENST00000452539.5, ENST00000454038.5, ENST00000456339.5, ENST00000457933.1, ENST00000460359.1, ENST00000463639.2, ENST00000464592.6, ENST00000466744.1, ENST00000469132.2, ENST00000470079.1, ENST00000471151.1, ENST00000471514.1, ENST00000474498.1, ENST00000477259.5, ENST00000477920.5, ENST00000479568.1, ENST00000479699.5, ENST00000479973.5, ENST00000481259.1, ENST00000482914.5, ENST00000484278.1, ENST00000486112.1, ENST00000486864.5, ENST00000487377.1, ENST00000487815.1, ENST00000488549.5, ENST00000491751.1, ENST00000492172.5, ENST00000492825.1, ENST00000493063.5, ENST00000494471.1, ENST00000495079.1, ENST00000495733.5, ENST00000496118.2, ENST00000496177.1, ENST00000497338.1, ENST00000518754.1, ENST00000549126.4, ENST00000552587.4, ENST00000580234.1, ENST00000581002.1, ENST00000584808.1, ENST00000607833.5, ENST00000675333.1, ENST00000675761.1, ENST00000677085.1, ENST00000677331.1, ENST00000678250.1, ENST00000678778.1, ENST00000679099.1, ENST00000679179.1

Found 2179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCTTGATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTaGTGCCTTAGGCTCAAGACTCCCAGGAGGGCTAGCTGGAGAACC +
Preference number: 1 (lower is better)
Translates to: GLDGATTLSTHRGKP*CLRLKTPRRASWRT
Trigger: GGTTCTCCAGCTAGCCCTCCTGGGAGTCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCATCAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR GCA 90 bp CTTGATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTaGCTTAGGCTCAAGACTCCCAGGAGGGCTAGCTGGAGAACCAGG +
Preference number: 1 (lower is better)
Translates to: LDGATTLSTHRGKPC*LRLKTPRRASWRTR
Trigger: CCTGGTTCTCCAGCTAGCCCTCCTGGGAGTCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCATCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR CCA 90 bp GGGAAGCCGTGCTGCCTTAGGCTCAAGACTCCCAGGAGGGCTAGCTaGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGTGGTAGT +
Preference number: 1 (lower is better)
Translates to: GKPCCLRLKTPRRAS*RTRSQDGCRCRGGS
Trigger: ACTACCACCCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAGTCTTGAGCCTAAGGCAGCACGGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR GCA 90 bp GCTGGAGGAGCTGCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTaGAAGGACTTGAGAAGTGGAGAGGAAATGACTGATGGGTGGGGA +
Preference number: 1 (lower is better)
Translates to: AGGAAVTARSGGPAE*KDLRSGEEMTDGWG
Trigger: TCCCCACCCATCAGTCATTTCCTCTCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGCAGCTCCTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR TCA 90 bp CCGCTTCTCATCGTAACTCATGGGCCTGCTCTCTTCCTCCTCCTCTaGATCATAACCTGTAGGCAGGGCAGGTGGGGCTGTCTTTGTGGC +
Preference number: 1 (lower is better)
Translates to: PLLIVTHGPALFLLL*IITCRQGRWGCLCG
Trigger: GCCACAAAGACAGCCCCACCTGCCCTGCCTACAGGTTATGATTCAGAGGAGGAGGAAGAGAGCAGGCCCATGAGTTACGATGAGAAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR GCA 90 bp TCAGGTAACTCCAGATCAGGGCTTTGCACACTCCCACCCTTGCCCTaGCCCATTTTGAATGGGGGCTCTGTGTCCAAGAGATCACTCCCC +
Preference number: 1 (lower is better)
Translates to: SGNSRSGLCTLPPLP*PILNGGSVSKRSLP
Trigger: GGGGAGTGATCTCTTGGACACAGAGCCCCCATTCAAAATGGGGCAGGGCAAGGGTGGGAGTGTGCAAAGCCCTGATCTGGAGTTACCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR GCA 90 bp GAGGCAGCATCAGAAGCTGCACAGGCAGGAAGACTCACCTTTCCCTaGCAACCCCAGACACCACAAGAAGAGCCCTCTCTTGAGAGCACA +
Preference number: 1 (lower is better)
Translates to: EAASEAAQAGRLTFP*QPQTPQEEPSLEST
Trigger: TGTGCTCTCAAGAGAGGGCTCTTCTTGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCTGTGCAGCTTCTGATGCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
3UTR-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCCTGCGGAGCCTTCCTaGCCCATCTGGCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAPAEPS*PIWPDP
Trigger: GGGGTCAGGCCAGATGGGGCAGGAAGGCTCCGCAGG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGCAGGTGGGGCAGGGTaGTCTAGGGGTCCGGTCCTG +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAAGGAG*SRGPVL
Trigger: CAGGACCGGACCCCTAGACCACCCTGCCCCACCTGC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTAGGGGTCCGGTCCTaGGGAGCCTTCCTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALGVRS*GAFLPH
Trigger: ATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTTCTTCCCTCCCCATaGAGGCTGAGGGGACCACGG +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALLPSP*RLRGPR
Trigger: CCGTGGTCCCCTCAGCCTCCATGGGGAGGGAAGAAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 32 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000678250.1
3UTR-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGACCAAATGGGGAGATaGCTGAAACCCCCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLADQMGR*LKPPGP
Trigger: GGGCCCTGGGGGTTTCAGTCATCTCCCCATTTGGTC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 32 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000678250.1
3UTR-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGAGACGGCAGGCACCTaGTGGGCACTGGTAACACTG +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAETAGT*WALVTL
Trigger: CAGTGTTACCAGTGCCCATCAGGTGCCTGCCGTCTC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTCCCACCCTTGCCCTaGCCCATTTTGAATGGGGGC +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALPPLP*PILNGG
Trigger: GCCCCCATTCAAAATGGGGCAGGGCAAGGGTGGGAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGAGCGCTGCCAACTTaGCCCCCTTCTTGTGGCTGT +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAGALPT*PPSCGC
Trigger: ACAGCCACAAGAAGGGGGCCAAGTTGGCAGCGCTCC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGAAGCGCTAAGGCGTaGCACTGCTACTTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAGSAKA*HCYLLC
Trigger: GCACAGCAAGTAGCAGTGTCACGCCTTAGCGCTTCC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTCCAGATCAGGGCTTTaGACACTCCCACCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASRSGL*TLPPLP
Trigger: GGGCAAGGGTGGGAGTGTGCAAAGCCCTGATCTGGA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCCCAGGAGGGCTAGCTaGAGAACCAGGAGCCAAGAT +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAPRRAS*RTRSQD
Trigger: ATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGTAGGCAGGGCAGGTaGGGCTGTCTTTGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLACRQGR*GCLCGL
Trigger: AAGGCCACAAAGACAGCCCCACCTGCCCTGCCTACA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTCAGTAAATGTCCCTaGATCCCTCCCCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAFSKCP*IPPPLQ
Trigger: CTGCAGTGGGGGAGGGATGCAGGGACATTTACTGAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGCAGGTGGGGCAGGGTaGTCTAGGGGTCCGGTCCTG +
Preference number: 2 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGAGGAG*SRGPVL
Trigger: CAGGACCGGACCCCTAGACCACCCTGCCCCACCTGC...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAGTTCTGCTAAGCGATaGGCCCTTTCTTCCTCTGAG +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASSAKR*ALSSSE
Trigger: CTCAGAGGAAGAAAGGGCTCATCGCTTAGCAGAACT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTCTTCCTCCTCCTCTaGATCATAACCTGTAGGCAG +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALFLLL*IITCRQ
Trigger: CTGCCTACAGGTTATGATTCAGAGGAGGAGGAAGAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTCTCATCGTAACTCATaGGCCTGCTCTCTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASHRNS*ACSLPP
Trigger: AGGAGGAAGAGAGCAGGCCCATGAGTTACGATGAGA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTGAGTCTGAATCACTaGTGTCTGAAGACGACGACG +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALSLNH*CLKTTT
Trigger: CGTCGTCGTCTTCAGACACCAGTGATTCAGACTCAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp TCCGCGCGCGCGCGCTCGCTCACGCGGGTGAAGAAGCTGAGTCGAAGGGGAAGGGGGAGCTTTTTCTATTaGCCAGCCGCAACGATGACG +
Preference number: 2 (lower is better)
Translates to: SARARSLTRVKKLSRRGRGSFFY*PAATMT
Trigger: CGTCATCGTTGCGGCTGGCCAATAGAAAAAGCTCCC...CCTTCCCCTTCGACTCAGCTTCTTCACCCGCGTGAGCGAGCGCGCGCGCGCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000496118.2
3UTR-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTGCTGTGCAGAGGATaGCTCTGTTTTCTCATTCGC +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALLCRG*LCFLIR
Trigger: GCGAATGAGAAAACAGAGTCATCCTCTGCACAGCAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGAGATCACTCCCCAATaGGGCTGGGAATTCAATGTT +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAEITPQ*GWEFNV
Trigger: AACATTGAATTCCCAGCCCCATTGGGGAGTGATCTC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp CGCGCGCGCGCGCTCGCTCACGCGGGTGAAGAAGCTGAGTCGAAGGGGAAGGAAGGCCAGCCGCAACGATaGCGTCATAAACTTCATTTC +
Preference number: 2 (lower is better)
Translates to: RARALAHAGEEAESKGKEGQPQR*RHKLHF
Trigger: GAAATGAAGTTTATGACGTCATCGTTGCGGCTGGCC...TTCCTTCCCCTTCGACTCAGCTTCTTCACCCGCGTGAGCGAGCGCGCGCGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496118.2
3UTR-3UTR GCA 90 bp GCTGCCAACTTGGCCCCCTTCTTGTGGCTGTTCTTAGGGATGGTCACTACCAGCCTAGGGGTCCGGTCCTaGGGAGCCTTCCTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: AANLAPFLWLFLGMVTTSLGVRS*GAFLPH
Trigger: ATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAG...GCTGGTAGTGACCATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTTGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAGGAGCGCTGCCAACTTaGCCCCCTTCTTGTGGCTGT +
Preference number: 2 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSGALPT*PPSCGC
Trigger: ACAGCCACAAGAAGGGGGCCAAGTTGGCAGCGCTCC...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGCTGGTAACACTGCCCTaGAGCGCTGCCAACTTGGCC +
Preference number: 2 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGLVTLP*SAANLA
Trigger: GGCCAAGTTGGCAGCGCTCCAGGGCAGTGTTACCAG...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp GAGGAGCTCTCACTGCTACTTTCCTCACTGGAGGACTCTGAAGACGATTTGGCCCCTGCGGAGCCTTCCTaGCCCATCTGGCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: EELSLLLSSLEDSEDDLAPAEPS*PIWPDP
Trigger: GGGGTCAGGCCAGATGGGGCAGGAAGGCTCCGCAGG...GGCCAAATCGTCTTCAGAGTCCTCCAGTGAGGAAAGTAGCAGTGAGAGCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp GCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAACCTGCGGAGCCTTCCTaGCCCATCTGGCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: AWILDPGTEQPVVHVLPEPAEPS*PIWPDP
Trigger: GGGGTCAGGCCAGATGGGGCAGGAAGGCTCCGCAGG...TTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp AGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGAGAGGAAATGACTCTAGGGGTCCGGTCCTaGGGAGCCTTCCTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: RSGGPAECKDLRSGEEMTLGVRS*GAFLPH
Trigger: ATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAG...AGTCATTTCCTCTCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCACCCAGGAGGGCTAGCTaGAGAACCAGGAGCCAAGAT +
Preference number: 2 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSPRRAS*RTRSQD
Trigger: ATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGG...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp GCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGACTCCCACCCTTGCCCTaGCCCATTTTGAATGGGGGC +
Preference number: 2 (lower is better)
Translates to: AVTARSGGPAECKDLRSGLPPLP*PILNGG
Trigger: GCCCCCATTCAAAATGGGGCAGGGCAAGGGTGGGAG...TCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp GGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGTGGTATCCAGATCAGGGCTTTaGACACTCCCACCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: GGLAGEPGAKMAVGVGVVSRSGL*TLPPLP
Trigger: GGGCAAGGGTGGGAGTGTGCAAAGCCCTGATCTGGA...TACCACCCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp TTTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGGCAGGTGGGGCAGGGTaGTCTAGGGGTCCGGTCCTG +
Preference number: 2 (lower is better)
Translates to: FPLGLGYWTLGQSSQLFMAGGAG*SRGPVL
Trigger: CAGGACCGGACCCCTAGACCACCCTGCCCCACCTGC...CATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGACTGGTAACACTGCCCTaGAGCGCTGCCAACTTGGCC +
Preference number: 2 (lower is better)
Translates to: AVTARSGGPAECKDLRSGLVTLP*SAANLA
Trigger: GGCCAAGTTGGCAGCGCTCCAGGGCAGTGTTACCAG...TCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGTTCATCTGGCATCTTaGCATAACGGAACTCAAATA +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAVHLAS*HNGTQI
Trigger: TATTTGAGTTCCGTTATGCCAAGATGCCAGATGAAC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTCTCTAAGTGTGGATaGCTTGAGTGTTTCAAAATC +
Preference number: 2 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALSKCG*LECFKI
Trigger: GATTTTGAAACACTCAAGCCATCCACACTTAGAGAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp CCAGGGGGCATGGCAGTAGAGACTGGTAAAGGCCCTGGTTCTAGTGGTTCATCTGAGACGGCAGGCACCTaGTGGGCACTGGTAACACTG +
Preference number: 2 (lower is better)
Translates to: PGGMAVETGKGPGSSGSSETAGT*WALVTL
Trigger: CAGTGTTACCAGTGCCCATCAGGTGCCTGCCGTCTC...AGATGAACCACTAGAACCAGGGCCTTTACCAGTCTCTACTGCCATGCCCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp GCAGTAGAGACTGGTAAAGGCCCTGGTTCTAGTGGTTCATCTGGCATCTTGGCACTAGGGGTCCGGTCCTaGGGAGCCTTCCTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: AVETGKGPGSSGSSGILALGVRS*GAFLPH
Trigger: ATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAG...TGCCAAGATGCCAGATGAACCACTAGAACCAGGGCCTTTACCAGTCTCTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp TTTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGCTAGGGGTCCGGTCCTaGGGAGCCTTCCTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: FPLGLGYWTLGQSSQLFMLGVRS*GAFLPH
Trigger: ATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAG...CATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCATTCAGTAAATGTCCCTaGATCCCTCCCCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSFSKCP*IPPPLQ
Trigger: CTGCAGTGGGGGAGGGATGCAGGGACATTTACTGAA...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp CCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACTGCCATAGGGGGAAGCCGTaGTGCCTTAGGCTCAAGACT +
Preference number: 2 (lower is better)
Translates to: PPRPPHLPPPLPQRSSHCHRGKP*CLRLKT
Trigger: AGTCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATG...GCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp CCAGGGGGCATGGCAGTAGAGACTGGTAAAGGCCCTGGTTCTAGTGGTTCATCTGGAGCGCTGCCAACTTaGCCCCCTTCTTGTGGCTGT +
Preference number: 2 (lower is better)
Translates to: PGGMAVETGKGPGSSGSSGALPT*PPSCGC
Trigger: ACAGCCACAAGAAGGGGGCCAAGTTGGCAGCGCTCC...AGATGAACCACTAGAACCAGGGCCTTTACCAGTCTCTACTGCCATGCCCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp GCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGAGACGGCAGGCACCTaGTGGGCACTGGTAACACTG +
Preference number: 2 (lower is better)
Translates to: AWILDPGTEQPVVHVLPEETAGT*WALVTL
Trigger: CAGTGTTACCAGTGCCCATCAGGTGCCTGCCGTCTC...TTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGAAGTGGAGAGGAAATaGCTGATGGGTGGGGAATGT +
Preference number: 2 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGEVERK*LMGGEC
Trigger: ACATTCCCCACCCATCAGTCATTTCCTCTCCACTTC...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp CTGGTAAAGGCCCTGGTTCTAGTGGTTCATCTGGCATCTTGGCATAACGGAACTCTAGGGGTCCGGTCCTaGGGAGCCTTCCTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: LVKALVLVVHLASWHNGTLGVRS*GAFLPH
Trigger: ATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAG...AGTTCCGTTATGCCAAGATGCCAGATGAACCACTAGAACCAGGGCCTTTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp CTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCTCCCACCCTTGCCCTaGCCCATTTTGAATGGGGGC +
Preference number: 2 (lower is better)
Translates to: LGLGYWTLGQSSQLFMYCLPPLP*PILNGG
Trigger: GCCCCCATTCAAAATGGGGCAGGGCAAGGGTGGGAG...GCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp CCAGGGGGCATGGCAGTAGAGACTGGTAAAGGCCCTGGTTCTAGTGGTTCATCTTCCAGATCAGGGCTTTaGACACTCCCACCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: PGGMAVETGKGPGSSGSSSRSGL*TLPPLP
Trigger: GGGCAAGGGTGGGAGTGTGCAAAGCCCTGATCTGGA...AGATGAACCACTAGAACCAGGGCCTTTACCAGTCTCTACTGCCATGCCCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp AGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGAGAGGAAATGACTTCCAGATCAGGGCTTTaGACACTCCCACCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: RSGGPAECKDLRSGEEMTSRSGL*TLPPLP
Trigger: GGGCAAGGGTGGGAGTGTGCAAAGCCCTGATCTGGA...AGTCATTTCCTCTCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp TGTAGGGCTTCCGGGGTTTCTTACGTAGGCAGGAAAGGACATAGCGCTCAAGCTCTGGGCTGGAGGAGCTaGAGTAACAGCAAGGAGCGG +
Preference number: 2 (lower is better)
Translates to: CRASGVSYVGRKGHSAQALGWRS*SNSKER
Trigger: CCGCTCCTTGCTGTTACTGCAGCTCCTCCAGCCCAG...AGCTTGAGCGCTATGTCCTTTCCTGCCTACGTAAGAAACCCCGGAAGCCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp TGTAGGGCTTCCGGGGTTTCTTACGTAGGCAGGAAAGGACATAGCGCTCAAGCTAGGGGGAAGCCGTGCTaGCTTAGGCTCAAGACTCCC +
Preference number: 2 (lower is better)
Translates to: CRASGVSYVGRKGHSAQARGKPC*LRLKTP
Trigger: GGGAGTCTTGAGCCTAAGGCAGCACGGCTTCCCCCT...AGCTTGAGCGCTATGTCCTTTCCTGCCTACGTAAGAAACCCCGGAAGCCCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp TGTAGGGCTTCCGGGGTTTCTTACGTAGGCAGGAAAGGACATAGCGCTCAAGCTGGAGCGCTGCCAACTTaGCCCCCTTCTTGTGGCTGT +
Preference number: 2 (lower is better)
Translates to: CRASGVSYVGRKGHSAQAGALPT*PPSCGC
Trigger: ACAGCCACAAGAAGGGGGCCAAGTTGGCAGCGCTCC...AGCTTGAGCGCTATGTCCTTTCCTGCCTACGTAAGAAACCCCGGAAGCCCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp TTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTGACCAAATGGGGAGATaGCTGAAACCCCCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: FLLGLDIGPWDRAASCSCDQMGR*LKPPGP
Trigger: GGGCCCTGGGGGTTTCAGTCATCTCCCCATTTGGTC...ACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
3UTR-3UTR TCA 90 bp TTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTGAGACGGCAGGCACCTaGTGGGCACTGGTAACACTG +
Preference number: 2 (lower is better)
Translates to: FLLGLDIGPWDRAASCSCETAGT*WALVTL
Trigger: CAGTGTTACCAGTGCCCATCAGGTGCCTGCCGTCTC...ACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp ACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGAGAGGAATTCAGTAAATGTCCCTaGATCCCTCCCCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: TARSGGPAECKDLRSGEEFSKCP*IPPPLQ
Trigger: CTGCAGTGGGGGAGGGATGCAGGGACATTTACTGAA...TTCCTCTCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp TCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTCCCACCCTTGCCCTaGCCCATTTTGAATGGGGGC +
Preference number: 2 (lower is better)
Translates to: SSWAWILDPGTEQPVVHVLPPLP*PILNGG
Trigger: GCCCCCATTCAAAATGGGGCAGGGCAAGGGTGGGAG...TACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp TCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCTCCCACCCTTGCCCTaGCCCATTTTGAATGGGGGC +
Preference number: 2 (lower is better)
Translates to: SWAWILDPGTEQPVVHVLLPPLP*PILNGG
Trigger: GCCCCCATTCAAAATGGGGCAGGGCAAGGGTGGGAG...CAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp CTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTCTCCCACCCTTGCCCTaGCCCATTTTGAATGGGGGC +
Preference number: 2 (lower is better)
Translates to: LLGLDIGPWDRAASCSCTLPPLP*PILNGG
Trigger: GCCCCCATTCAAAATGGGGCAGGGCAAGGGTGGGAG...AGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp TTTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGCTGGGCTGGAGGAGCTaGAGTAACAGCAAGGAGCGG +
Preference number: 2 (lower is better)
Translates to: FPLGLGYWTLGQSSQLFMLGWRS*SNSKER
Trigger: CCGCTCCTTGCTGTTACTGCAGCTCCTCCAGCCCAG...CATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGAAGGGGTGGTAGTATCTaGTTTCCGCTTTACGCCTTT +
Preference number: 2 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRRGGSI*FPLYAF
Trigger: AAAGGCGTAAAGCGGAAAGCAGATACTACCACCCCT...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGAGAGATCACTCCCCAATaGGGCTGGGAATTCAATGTT +
Preference number: 2 (lower is better)
Translates to: GRPLSLRIGGSRAALGSREITPQ*GWEFNV
Trigger: AACATTGAATTCCCAGCCCCATTGGGGAGTGATCTC...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp CTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGGAGCGCTGCCAACTTaGCCCCCTTCTTGTGGCTGT +
Preference number: 2 (lower is better)
Translates to: LLGLDIGPWDRAASCSCTGALPT*PPSCGC
Trigger: ACAGCCACAAGAAGGGGGCCAAGTTGGCAGCGCTCC...AGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp TTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTCTGGTAACACTGCCCTaGAGCGCTGCCAACTTGGCC +
Preference number: 2 (lower is better)
Translates to: FLLGLDIGPWDRAASCSCLVTLP*SAANLA
Trigger: GGCCAAGTTGGCAGCGCTCCAGGGCAGTGTTACCAG...ACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp TCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGGTAACACTGCCCTaGAGCGCTGCCAACTTGGCC +
Preference number: 2 (lower is better)
Translates to: SSWAWILDPGTEQPVVHVLVTLP*SAANLA
Trigger: GGCCAAGTTGGCAGCGCTCCAGGGCAGTGTTACCAG...TACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp TGTAGGGCTTCCGGGGTTTCTTACGTAGGCAGGAAAGGACATAGCGCTCAAGCTCCCAGGAGGGCTAGCTaGAGAACCAGGAGCCAAGAT +
Preference number: 2 (lower is better)
Translates to: CRASGVSYVGRKGHSAQAPRRAS*RTRSQD
Trigger: ATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGG...AGCTTGAGCGCTATGTCCTTTCCTGCCTACGTAAGAAACCCCGGAAGCCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGCTGTTCCTGTAACTCTGAAGACGATTTaGCCAAGCCAGGGGGCATGG +
Preference number: 2 (lower is better)
Translates to: DPGTEQPVVHVLPEAVPVTLKTI*PSQGAW
Trigger: CCATGCCCCCTGGCTTGGCCAAATCGTCTTCAGAGT...TACAGGAACAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp CCAATGGGGCTGGGAATTCAATGTTGTTTTGTCCATGTCCCTCCTTCAGTAAATCCTGCGGAGCCTTCCTaGCCCATCTGGCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: PMGLGIQCCFVHVPPSVNPAEPS*PIWPDP
Trigger: GGGGTCAGGCCAGATGGGGCAGGAAGGCTCCGCAGG...ATTTACTGAAGGAGGGACATGGACAAAACAACATTGAATTCCCAGCCCCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp GACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGCTGTTCCTGTACAGAGGAGCTCTCACTaGTACTTTCCTCACTGGAGG +
Preference number: 2 (lower is better)
Translates to: DPGTEQPVVHVLPEAVPVQRSSH*YFPHWR
Trigger: CCTCCAGTGAGGAAAGTAGCAGTGAGAGCTCCTCTG...TACAGGAACAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp CCAATGGGGCTGGGAATTCAATGTTGTTTTGTCCATGTCCCTCCTTCAGTAAATGCAGGTGGGGCAGGGTaGTCTAGGGGTCCGGTCCTG +
Preference number: 2 (lower is better)
Translates to: PMGLGIQCCFVHVPPSVNAGGAG*SRGPVL
Trigger: CAGGACCGGACCCCTAGACCACCCTGCCCCACCTGC...ATTTACTGAAGGAGGGACATGGACAAAACAACATTGAATTCCCAGCCCCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCCTTCTTCCCTCCCCATaGAGGCTGAGGGGACCACGG +
Preference number: 2 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLLLPSP*RLRGPR
Trigger: CCGTGGTCCCCTCAGCCTCCATGGGGAGGGAAGAAG...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
3UTR-3UTR CCA 90 bp AGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGAGAGGAAATGACTTTGGCCCCCTTCTTGTaGCTGTTCTTAGGGATGGTC +
Preference number: 2 (lower is better)
Translates to: RSGGPAECKDLRSGEEMTLAPFL*LFLGMV
Trigger: GACCATCCCTAAGAACAGCCACAAGAAGGGGGCCAA...AGTCATTTCCTCTCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp CCAGGGGGCATGGCAGTAGAGACTGGTAAAGGCCCTGGTTCTAGTGGTTCATCTTTGGCCCCCTTCTTGTaGCTGTTCTTAGGGATGGTC +
Preference number: 2 (lower is better)
Translates to: PGGMAVETGKGPGSSGSSLAPFL*LFLGMV
Trigger: GACCATCCCTAAGAACAGCCACAAGAAGGGGGCCAA...AGATGAACCACTAGAACCAGGGCCTTTACCAGTCTCTACTGCCATGCCCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp CTGGTAAAGGCCCTGGTTCTAGTGGTTCATCTGGCATCTTGGCATAACGGAACTCTGGTAACACTGCCCTaGAGCGCTGCCAACTTGGCC +
Preference number: 2 (lower is better)
Translates to: LVKALVLVVHLASWHNGTLVTLP*SAANLA
Trigger: GGCCAAGTTGGCAGCGCTCCAGGGCAGTGTTACCAG...AGTTCCGTTATGCCAAGATGCCAGATGAACCACTAGAACCAGGGCCTTTACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCCTTCTTAGGTTGAGGTaGGCGGGGTGCCCTAGGCCC +
Preference number: 2 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLLLRLR*AGCPRP
Trigger: GGGCCTAGGGCACCCCGCCCACCTCAACCTAAGAAG...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCGACCAAATGGGGAGATaGCTGAAACCCCCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLDQMGR*LKPPGP
Trigger: GGGCCCTGGGGGTTTCAGTCATCTCCCCATTTGGTC...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
3UTR-3UTR TCA 90 bp GACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGCTGTTCCTGTAGAAGTGGAGAGGAAATaGCTGATGGGTGGGGAATGT +
Preference number: 2 (lower is better)
Translates to: DPGTEQPVVHVLPEAVPVEVERK*LMGGEC
Trigger: ACATTCCCCACCCATCAGTCATTTCCTCTCCACTTC...TACAGGAACAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp AATGGGGCTGGGAATTCAATGTTGTTTTGTCCATGTCCCTCCTTCAGTAAATGTCCTGCGGAGCCTTCCTaGCCCATCTGGCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: NGAGNSMLFCPCPSFSKCPAEPS*PIWPDP
Trigger: GGGGTCAGGCCAGATGGGGCAGGAAGGCTCCGCAGG...ACATTTACTGAAGGAGGGACATGGACAAAACAACATTGAATTCCCAGCCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp CCAATGGGGCTGGGAATTCAATGTTGTTTTGTCCATGTCCCTCCTTCAGTAAATCTAGGGGTCCGGTCCTaGGGAGCCTTCCTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: PMGLGIQCCFVHVPPSVNLGVRS*GAFLPH
Trigger: ATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAG...ATTTACTGAAGGAGGGACATGGACAAAACAACATTGAATTCCCAGCCCCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp CATAACGGAACTCAAATACATCCTGTAGCTTTCGTGCCATTGCCACAACATCGTCTAGGGGTCCGGTCCTaGGGAGCCTTCCTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: HNGTQIHPVAFVPLPQHRLGVRS*GAFLPH
Trigger: ATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAG...ACGATGTTGTGGCAATGGCACGAAAGCTACAGGATGTATTTGAGTTCCGTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp CTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCAGACTCACCTTTCCCTaGCAACCCCAGACACCACAA +
Preference number: 2 (lower is better)
Translates to: LGLGYWTLGQSSQLFMYCRLTFP*QPQTPQ
Trigger: TTGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCT...GCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
3UTR-3UTR CCA 90 bp AATGGGGCTGGGAATTCAATGTTGTTTTGTCCATGTCCCTCCTTCAGTAAATGTGCAGGTGGGGCAGGGTaGTCTAGGGGTCCGGTCCTG +
Preference number: 2 (lower is better)
Translates to: NGAGNSMLFCPCPSFSKCAGGAG*SRGPVL
Trigger: CAGGACCGGACCCCTAGACCACCCTGCCCCACCTGC...ACATTTACTGAAGGAGGGACATGGACAAAACAACATTGAATTCCCAGCCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp CTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCTTGGCCCCCTTCTTGTaGCTGTTCTTAGGGATGGTC +
Preference number: 2 (lower is better)
Translates to: LGLGYWTLGQSSQLFMYCLAPFL*LFLGMV
Trigger: GACCATCCCTAAGAACAGCCACAAGAAGGGGGCCAA...GCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp TGTAGGGCTTCCGGGGTTTCTTACGTAGGCAGGAAAGGACATAGCGCTCAAGCTGAAGTGGAGAGGAAATaGCTGATGGGTGGGGAATGT +
Preference number: 2 (lower is better)
Translates to: CRASGVSYVGRKGHSAQAEVERK*LMGGEC
Trigger: ACATTCCCCACCCATCAGTCATTTCCTCTCCACTTC...AGCTTGAGCGCTATGTCCTTTCCTGCCTACGTAAGAAACCCCGGAAGCCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCTTGGACTTCTTAGGTTaGGGTGGGCGGGGTGCCCTA +
Preference number: 2 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLLDFLG*GGRGAL
Trigger: TAGGGCACCCCGCCCACCTCAACCTAAGAAGTCCAA...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp AATGGGGCTGGGAATTCAATGTTGTTTTGTCCATGTCCCTCCTTCAGTAAATGTCTAGGGGTCCGGTCCTaGGGAGCCTTCCTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: NGAGNSMLFCPCPSFSKCLGVRS*GAFLPH
Trigger: ATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAG...ACATTTACTGAAGGAGGGACATGGACAAAACAACATTGAATTCCCAGCCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp TCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGTTCAGTAAATGTCCCTaGATCCCTCCCCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: SWAWILDPGTEQPVVHVLFSKCP*IPPPLQ
Trigger: CTGCAGTGGGGGAGGGATGCAGGGACATTTACTGAA...CAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp TCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTAAGACTCACCTTTCCCTaGCAACCCCAGACACCACAA +
Preference number: 2 (lower is better)
Translates to: SSWAWILDPGTEQPVVHVRLTFP*QPQTPQ
Trigger: TTGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCT...TACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
3UTR-3UTR CCA 90 bp CTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTTTGGCCCCCTTCTTGTaGCTGTTCTTAGGGATGGTC +
Preference number: 2 (lower is better)
Translates to: LLGLDIGPWDRAASCSCTLAPFL*LFLGMV
Trigger: GACCATCCCTAAGAACAGCCACAAGAAGGGGGCCAA...AGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp TTTCTAATTCCCGCTTTTTCTCCAAAGCCAGTTCCTCCTTTGTCTTTCCCACAGGAGACGGCAGGCACCTaGTGGGCACTGGTAACACTG +
Preference number: 2 (lower is better)
Translates to: FLIPAFSPKPVPPLSFPQETAGT*WALVTL
Trigger: CAGTGTTACCAGTGCCCATCAGGTGCCTGCCGTCTC...CTGTGGGAAAGACAAAGGAGGAACTGGCTTTGGAGAAAAAGCGGGAATTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp CTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGAAGTGGAGAGGAAATaGCTGATGGGTGGGGAATGT +
Preference number: 2 (lower is better)
Translates to: LLGLDIGPWDRAASCSCTEVERK*LMGGEC
Trigger: ACATTCCCCACCCATCAGTCATTTCCTCTCCACTTC...AGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCCCCCAGGTAATTTGTTaGTGTCCAGGCTCAGCTGCC +
Preference number: 2 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLPQVIC*CPGSAA
Trigger: GGCAGCTGAGCCTGGACATCAACAAATTACCTGGGG...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp GTTCTGCTAAGCGATGAGCCCTTTCTTCCTCTGAGTCTGAGCTTTCACTCTCTTGGGGGTCCAGCAGAGTaGAAGGACTTGAGAAGTGGA +
Preference number: 2 (lower is better)
Translates to: VLLSDEPFLPLSLSFHSLGGPAE*KDLRSG
Trigger: TCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCC...AAGAGAGTGAAAGCTCAGACTCAGAGGAAGAAAGGGCTCATCGCTTAGCAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp CTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCAGGGGTGGTAGTATCTaGTTTCCGCTTTACGCCTTT +
Preference number: 2 (lower is better)
Translates to: LGLGYWTLGQSSQLFMYCRGGSI*FPLYAF
Trigger: AAAGGCGTAAAGCGGAAAGCAGATACTACCACCCCT...GCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp TTTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGAGCAGCAAACTCCTGTaGATCCCGGTAATCACGGTT +
Preference number: 2 (lower is better)
Translates to: FPLGLGYWTLGQSSQLFMSSKLL*IPVITV
Trigger: AACCGTGATTACCGGGATGCACAGGAGTTTGCTGCT...CATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp TGTAGGGCTTCCGGGGTTTCTTACGTAGGCAGGAAAGGACATAGCGCTCAAGCTGAGATCACTCCCCAATaGGGCTGGGAATTCAATGTT +
Preference number: 2 (lower is better)
Translates to: CRASGVSYVGRKGHSAQAEITPQ*GWEFNV
Trigger: AACATTGAATTCCCAGCCCCATTGGGGAGTGATCTC...AGCTTGAGCGCTATGTCCTTTCCTGCCTACGTAAGAAACCCCGGAAGCCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGAGATCACTCCCCAATaGGGCTGGGAATTCAATGTT +
Preference number: 2 (lower is better)
Translates to: AWILDPGTEQPVVHVLPEEITPQ*GWEFNV
Trigger: AACATTGAATTCCCAGCCCCATTGGGGAGTGATCTC...TTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp GACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGCTGTTCCTGTATGCTACTTTCCTCACTaGAGGACTCTGAAGACGATT +
Preference number: 2 (lower is better)
Translates to: DPGTEQPVVHVLPEAVPVCYFPH*RTLKTI
Trigger: AATCGTCTTCAGAGTCCTCCAGTGAGGAAAGTAGCA...TACAGGAACAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp CCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACTGCATCTTGCATACACTCTaGAGCAGCCCAATAATAATT +
Preference number: 2 (lower is better)
Translates to: PPRPPHLPPPLPQRSSHCILHTL*SSPIII
Trigger: AATTATTATTGGGCTGCTTCAGAGTGTATGCAAGAT...GCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp GTTCTGCTAAGCGATGAGCCCTTTCTTCCTCTGAGTCTGAGCTTTCACTCTCTTTTCAGTAAATGTCCCTaGATCCCTCCCCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: VLLSDEPFLPLSLSFHSLFSKCP*IPPPLQ
Trigger: CTGCAGTGGGGGAGGGATGCAGGGACATTTACTGAA...AAGAGAGTGAAAGCTCAGACTCAGAGGAAGAAAGGGCTCATCGCTTAGCAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp TTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTAGGGGTGGTAGTATCTaGTTTCCGCTTTACGCCTTT +
Preference number: 2 (lower is better)
Translates to: FLLGLDIGPWDRAASCSCRGGSI*FPLYAF
Trigger: AAAGGCGTAAAGCGGAAAGCAGATACTACCACCCCT...ACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCTTGGCCCCCTTCTTGTaGCTGTTCTTAGGGATGGTC +
Preference number: 2 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLLAPFL*LFLGMV
Trigger: GACCATCCCTAAGAACAGCCACAAGAAGGGGGCCAA...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp TTTTTAGTAGAATTGAGCTGTCCGCTGACATCTTGTAACCGCTTTTCTAATTCCCTTTGCGTGGGGGCTTaGTGGGGCGACCACTCTCTC +
Preference number: 2 (lower is better)
Translates to: FLVELSCPLTSCNRFSNSLCVGA*WGDHSL
Trigger: GAGAGAGTGGTCGCCCCATCAAGCCCCCACGCAAAG...GGAATTAGAAAAGCGGTTACAAGATGTCAGCGGACAGCTCAATTCTACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCAGTTCTGCTAAGCGATaGGCCCTTTCTTCCTCTGAG +
Preference number: 2 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLSSAKR*ALSSSE
Trigger: CTCAGAGGAAGAAAGGGCTCATCGCTTAGCAGAACT...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCAGCAGCAAACTCCTGTaGATCCCGGTAATCACGGTT +
Preference number: 2 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLSSKLL*IPVITV
Trigger: AACCGTGATTACCGGGATGCACAGGAGTTTGCTGCT...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp TTTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTGCTACTTTCCTCACTaGAGGACTCTGAAGACGATT +
Preference number: 2 (lower is better)
Translates to: FPLGLGYWTLGQSSQLFMCYFPH*RTLKTI
Trigger: AATCGTCTTCAGAGTCCTCCAGTGAGGAAAGTAGCA...CATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp AACGGAACTCAAATACATCCTGTAGCTTTCGTGCCATTGCCACAACATCGTGATTTCAGTAAATGTCCCTaGATCCCTCCCCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: NGTQIHPVAFVPLPQHRDFSKCP*IPPPLQ
Trigger: CTGCAGTGGGGGAGGGATGCAGGGACATTTACTGAA...ATCACGATGTTGTGGCAATGGCACGAAAGCTACAGGATGTATTTGAGTTCCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp TTTCTAATTCCCGCTTTTTCTCCAAAGCCAGTTCCTCCTTTGTCTTTCCCACAGCAGAGGAGCTCTCACTaGTACTTTCCTCACTGGAGG +
Preference number: 2 (lower is better)
Translates to: FLIPAFSPKPVPPLSFPQQRSSH*YFPHWR
Trigger: CCTCCAGTGAGGAAAGTAGCAGTGAGAGCTCCTCTG...CTGTGGGAAAGACAAAGGAGGAACTGGCTTTGGAGAAAAAGCGGGAATTAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp TTTTTAGTAGAATTGAGCTGTCCGCTGACATCTTGTAACCGCTTTTCTAATTCCTCCAGATCAGGGCTTTaGACACTCCCACCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: FLVELSCPLTSCNRFSNSSRSGL*TLPPLP
Trigger: GGGCAAGGGTGGGAGTGTGCAAAGCCCTGATCTGGA...GGAATTAGAAAAGCGGTTACAAGATGTCAGCGGACAGCTCAATTCTACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp TTTCTAATTCCCGCTTTTTCTCCAAAGCCAGTTCCTCCTTTGTCTTTCCCACAGAGCAGCAAACTCCTGTaGATCCCGGTAATCACGGTT +
Preference number: 2 (lower is better)
Translates to: FLIPAFSPKPVPPLSFPQSSKLL*IPVITV
Trigger: AACCGTGATTACCGGGATGCACAGGAGTTTGCTGCT...CTGTGGGAAAGACAAAGGAGGAACTGGCTTTGGAGAAAAAGCGGGAATTAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCTGCTACTTTCCTCACTaGAGGACTCTGAAGACGATT +
Preference number: 2 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLCYFPH*RTLKTI
Trigger: AATCGTCTTCAGAGTCCTCCAGTGAGGAAAGTAGCA...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp TTTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGATCTTGCATACACTCTaGAGCAGCCCAATAATAATT +
Preference number: 2 (lower is better)
Translates to: FPLGLGYWTLGQSSQLFMILHTL*SSPIII
Trigger: AATTATTATTGGGCTGCTTCAGAGTGTATGCAAGAT...CATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp CATAACGGAACTCAAATACATCCTGTAGCTTTCGTGCCATTGCCACAACATCGTGAGATCACTCCCCAATaGGGCTGGGAATTCAATGTT +
Preference number: 2 (lower is better)
Translates to: HNGTQIHPVAFVPLPQHREITPQ*GWEFNV
Trigger: AACATTGAATTCCCAGCCCCATTGGGGAGTGATCTC...ACGATGTTGTGGCAATGGCACGAAAGCTACAGGATGTATTTGAGTTCCGTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp TTTCTAATTCCCGCTTTTTCTCCAAAGCCAGTTCCTCCTTTGTCTTTCCCACAGGAGATCACTCCCCAATaGGGCTGGGAATTCAATGTT +
Preference number: 2 (lower is better)
Translates to: FLIPAFSPKPVPPLSFPQEITPQ*GWEFNV
Trigger: AACATTGAATTCCCAGCCCCATTGGGGAGTGATCTC...CTGTGGGAAAGACAAAGGAGGAACTGGCTTTGGAGAAAAAGCGGGAATTAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCGTTCATCTGGCATCTTaGCATAACGGAACTCAAATA +
Preference number: 2 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLVHLAS*HNGTQI
Trigger: TATTTGAGTTCCGTTATGCCAAGATGCCAGATGAAC...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CCA 90 bp TTTCTAATTCCCGCTTTTTCTCCAAAGCCAGTTCCTCCTTTGTCTTTCCCACAGGTAAAGAGGGCTCCCTaGCTTGGATTATATGCACAA +
Preference number: 2 (lower is better)
Translates to: FLIPAFSPKPVPPLSFPQVKRAP*LGLYAQ
Trigger: TTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTAC...CTGTGGGAAAGACAAAGGAGGAACTGGCTTTGGAGAAAAAGCGGGAATTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR TCA 90 bp TTTTTAGTAGAATTGAGCTGTCCGCTGACATCTTGTAACCGCTTTTCTAATTCCGAAGTGGAGAGGAAATaGCTGATGGGTGGGGAATGT +
Preference number: 2 (lower is better)
Translates to: FLVELSCPLTSCNRFSNSEVERK*LMGGEC
Trigger: ACATTCCCCACCCATCAGTCATTTCCTCTCCACTTC...GGAATTAGAAAAGCGGTTACAAGATGTCAGCGGACAGCTCAATTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR GCA 90 bp TTTTTAGTAGAATTGAGCTGTCCGCTGACATCTTGTAACCGCTTTTCTAATTCCAGCAGCAAACTCCTGTaGATCCCGGTAATCACGGTT +
Preference number: 2 (lower is better)
Translates to: FLVELSCPLTSCNRFSNSSSKLL*IPVITV
Trigger: AACCGTGATTACCGGGATGCACAGGAGTTTGCTGCT...GGAATTAGAAAAGCGGTTACAAGATGTCAGCGGACAGCTCAATTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGAGTCAGGCAAGTCTTaGCGTGGGGGCTTGATGGGG +
Preference number: 3 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAESGKS*RGGLMG
Trigger: CCCCATCAAGCCCCCACGCAAAGACTTGCCTGACTC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTGCCCTGCCCCATTTaGAATGGGGGCTCTGTGTCC +
Preference number: 3 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALPCPI*NGGSVS
Trigger: GGACACAGAGCCCCCATTCAAAATGGGGCAGGGCAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTCTTGGGCTTGGATATaGGACCCTGGGACAGAGCAG +
Preference number: 3 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASWAWI*DPGTEQ
Trigger: CTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTCCCCAGGTAATTTGTaGATGTCCAGGCTCAGCTGC +
Preference number: 3 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASPGNL*MSRLSC
Trigger: GCAGCTGAGCCTGGACATCAACAAATTACCTGGGGA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAGAGGGCTCCCTGGCTaGGATTATATGCACAACTCG +
Preference number: 3 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLARGLPG*DYMHNS
Trigger: CGAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR GCA 72 bp GGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTaGTGCCTTAGGCTCAAGACTCCCAGGAGGGCTAGC +
Preference number: 3 (lower is better)
Translates to: GATTLSTHRGKP*CLRLKTPRRAS
Trigger: GCTAGCCCTCCTGGGAGTCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp CGCGCGCGCGCGCTCGCTCACGCGGGTGAAGAAGCTGAGTCGAAGGGGAAGGAACGGGAGCTTTTTCTATaGGCCAGCCGCAACGATGAC +
Preference number: 3 (lower is better)
Translates to: RARALAHAGEEAESKGKERELFL*ASRNDD
Trigger: GTCATCGTTGCGGCTGGCCAATAGAAAAAGCTCCCG...TTCCTTCCCCTTCGACTCAGCTTCTTCACCCGCGTGAGCGAGCGCGCGCGCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496118.2
3UTR-3UTR CAA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGCTGGGAATTCAATGTaGTTTTGTCCATGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAAGNSM*FCPCPS
Trigger: GGAGGGACATGGACAAAACAACATTGAATTCCCAGC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR GCA 72 bp GCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTaGCTTAGGCTCAAGACTCCCAGGAGGGCTAGCTGG +
Preference number: 3 (lower is better)
Translates to: ATTLSTHRGKPC*LRLKTPRRASW
Trigger: CCAGCTAGCCCTCCTGGGAGTCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp GGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGTGGTATGGAGCGCTGCCAACTaGGCCCCCTTCTTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: GGLAGEPGAKMAVGVGVVWSAAN*APFLWL
Trigger: CAGCCACAAGAAGGGGGCCAAGTTGGCAGCGCTCCA...TACCACCCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGAATTCAATGTTGTTTaGTCCATGTCCCTCCTTCAG +
Preference number: 3 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAEFNVV*SMSLLQ
Trigger: CTGAAGGAGGGACATGGACAAAACAACATTGAATTC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 34 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp GCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGATTGCCCTGCCCCATTTaGAATGGGGGCTCTGTGTCC +
Preference number: 3 (lower is better)
Translates to: AVTARSGGPAECKDLRSGLPCPI*NGGSVS
Trigger: GGACACAGAGCCCCCATTCAAAATGGGGCAGGGCAA...TCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAACTTGGCCCCCTTCTaGTGGCTGTTCTTAGGGATG +
Preference number: 3 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSNLAPF*WLFLGM
Trigger: CATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTT...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR CCA 72 bp TGCTGCCTTAGGCTCAAGACTCCCAGGAGGGCTAGCTaGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGG +
Preference number: 3 (lower is better)
Translates to: CCLRLKTPRRAS*RTRSQDGCRCR
Trigger: CCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAGTCTTGAGCCTAAGGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp TGGAGGAGCTGCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTAACTTGGCCCCCTTCTaGTGGCTGTTCTTAGGGATG +
Preference number: 3 (lower is better)
Translates to: WRSCSNSKERGSSRVQGLNLAPF*WLFLGM
Trigger: CATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTT...AAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGCAGCTCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp TCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGTGGAGCGCTGCCAACTaGGCCCCCTTCTTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: SWAWILDPGTEQPVVHVLWSAAN*APFLWL
Trigger: CAGCCACAAGAAGGGGGCCAAGTTGGCAGCGCTCCA...CAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR CCA 72 bp CTGGTGTTGTTGCTGAGAGTCAGGCAAGTCTTTGCGTaGGGGCTTGATGGGGCGACCACTCTCTCTACGCAT +
Preference number: 3 (lower is better)
Translates to: LVLLLRVRQVFA*GLDGATTLSTH
Trigger: ATGCGTAGAGAGAGTGGTCGCCCCATCAAGCCCCCACGCAAAGACTTGCCTGACTCTCAGCAACAACACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp GCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAATTGCCCTGCCCCATTTaGAATGGGGGCTCTGTGTCC +
Preference number: 3 (lower is better)
Translates to: AWILDPGTEQPVVHVLPELPCPI*NGGSVS
Trigger: GGACACAGAGCCCCCATTCAAAATGGGGCAGGGCAA...TTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp CCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACTGCGTAGCTTTCGTGCCATaGCCACAACATCGTGATCTG +
Preference number: 3 (lower is better)
Translates to: PPRPPHLPPPLPQRSSHCVAFVP*PQHRDL
Trigger: CAGATCACGATGTTGTGGCAATGGCACGAAAGCTAC...GCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp TTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTTTGCCCTGCCCCATTTaGAATGGGGGCTCTGTGTCC +
Preference number: 3 (lower is better)
Translates to: FLLGLDIGPWDRAASCSCLPCPI*NGGSVS
Trigger: GGACACAGAGCCCCCATTCAAAATGGGGCAGGGCAA...ACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp AGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGAGAGGAAATGACTAACTTGGCCCCCTTCTaGTGGCTGTTCTTAGGGATG +
Preference number: 3 (lower is better)
Translates to: RSGGPAECKDLRSGEEMTNLAPF*WLFLGM
Trigger: CATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTT...AGTCATTTCCTCTCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCTGGAGCGCTGCCAACTaGGCCCCCTTCTTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLWSAAN*APFLWL
Trigger: CAGCCACAAGAAGGGGGCCAAGTTGGCAGCGCTCCA...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp GCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGAGCTGGGAATTCAATGTaGTTTTGTCCATGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: AVTARSGGPAECKDLRSGAGNSM*FCPCPS
Trigger: GGAGGGACATGGACAAAACAACATTGAATTCCCAGC...TCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp CTTCCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACGCTGGGAATTCAATGTaGTTTTGTCCATGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: LPPRPPHLPPPLPQRSSHAGNSM*FCPCPS
Trigger: GGAGGGACATGGACAAAACAACATTGAATTCCCAGC...GTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp CTGGTAAAGGCCCTGGTTCTAGTGGTTCATCTGGCATCTTGGCATAACGGAACTTTGCCCTGCCCCATTTaGAATGGGGGCTCTGTGTCC +
Preference number: 3 (lower is better)
Translates to: LVKALVLVVHLASWHNGTLPCPI*NGGSVS
Trigger: GGACACAGAGCCCCCATTCAAAATGGGGCAGGGCAA...AGTTCCGTTATGCCAAGATGCCAGATGAACCACTAGAACCAGGGCCTTTACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp CTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCAACTTGGCCCCCTTCTaGTGGCTGTTCTTAGGGATG +
Preference number: 3 (lower is better)
Translates to: LGLGYWTLGQSSQLFMYCNLAPF*WLFLGM
Trigger: CATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTT...GCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCTCTTTGCGTGGGGGCTaGATGGGGCGACCACTCTCT +
Preference number: 3 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLSLRGG*MGRPLS
Trigger: AGAGAGTGGTCGCCCCATCAAGCCCCCACGCAAAGA...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp GACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGCTGTTCCTGTAGTAGCTTTCGTGCCATaGCCACAACATCGTGATCTG +
Preference number: 3 (lower is better)
Translates to: DPGTEQPVVHVLPEAVPVVAFVP*PQHRDL
Trigger: CAGATCACGATGTTGTGGCAATGGCACGAAAGCTAC...TACAGGAACAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp GGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGTGGTAGAATTCAATGTTGTTTaGTCCATGTCCCTCCTTCAG +
Preference number: 3 (lower is better)
Translates to: GGLAGEPGAKMAVGVGVVEFNVV*SMSLLQ
Trigger: CTGAAGGAGGGACATGGACAAAACAACATTGAATTC...TACCACCCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp TTTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGAACTTGGCCCCCTTCTaGTGGCTGTTCTTAGGGATG +
Preference number: 3 (lower is better)
Translates to: FPLGLGYWTLGQSSQLFMNLAPF*WLFLGM
Trigger: CATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTT...CATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp TTTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTTCTCCATCTTCCGCTaGACAGTGCTGAGGTCCATG +
Preference number: 3 (lower is better)
Translates to: FPLGLGYWTLGQSSQLFMFSIFR*TVLRSM
Trigger: CATGGACCTCAGCACTGTCAAGCGGAAGATGGAGAA...CATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp TGTAGGGCTTCCGGGGTTTCTTACGTAGGCAGGAAAGGACATAGCGCTCAAGCTGTAGCTTTCGTGCCATaGCCACAACATCGTGATCTG +
Preference number: 3 (lower is better)
Translates to: CRASGVSYVGRKGHSAQAVAFVP*PQHRDL
Trigger: CAGATCACGATGTTGTGGCAATGGCACGAAAGCTAC...AGCTTGAGCGCTATGTCCTTTCCTGCCTACGTAAGAAACCCCGGAAGCCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp GCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGCTGGGAATTCAATGTaGTTTTGTCCATGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: AWILDPGTEQPVVHVLPEAGNSM*FCPCPS
Trigger: GGAGGGACATGGACAAAACAACATTGAATTCCCAGC...TTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp CTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCGCTGGGAATTCAATGTaGTTTTGTCCATGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: LGLGYWTLGQSSQLFMYCAGNSM*FCPCPS
Trigger: GGAGGGACATGGACAAAACAACATTGAATTCCCAGC...GCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp TGTAGGGCTTCCGGGGTTTCTTACGTAGGCAGGAAAGGACATAGCGCTCAAGCTCCCTGGGGTTCAAGTTaGAAGTCAAAGGAATTTGGG +
Preference number: 3 (lower is better)
Translates to: CRASGVSYVGRKGHSAQAPWGSS*KSKEFG
Trigger: CCCAAATTCCTTTGACTTCAAACTTGAACCCCAGGG...AGCTTGAGCGCTATGTCCTTTCCTGCCTACGTAAGAAACCCCGGAAGCCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678778.1
3UTR CCA 72 bp TTCTCTCTTTTCCTCTTGGGCTTGGATATTGGACCCTaGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGA +
Preference number: 3 (lower is better)
Translates to: FSLFLLGLDIGP*DRAASCSCTAR
Trigger: TCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAAAAGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp TTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTGCTGGGAATTCAATGTaGTTTTGTCCATGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: FLLGLDIGPWDRAASCSCAGNSM*FCPCPS
Trigger: GGAGGGACATGGACAAAACAACATTGAATTCCCAGC...ACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp GTTCTGCTAAGCGATGAGCCCTTTCTTCCTCTGAGTCTGAGCTTTCACTCTCTTAACTTGGCCCCCTTCTaGTGGCTGTTCTTAGGGATG +
Preference number: 3 (lower is better)
Translates to: VLLSDEPFLPLSLSFHSLNLAPF*WLFLGM
Trigger: CATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTT...AAGAGAGTGAAAGCTCAGACTCAGAGGAAGAAAGGGCTCATCGCTTAGCAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCAACTTGGCCCCCTTCTaGTGGCTGTTCTTAGGGATG +
Preference number: 3 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLNLAPF*WLFLGM
Trigger: CATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTT...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCTCCCCAGGTAATTTGTaGATGTCCAGGCTCAGCTGC +
Preference number: 3 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLSPGNL*MSRLSC
Trigger: GCAGCTGAGCCTGGACATCAACAAATTACCTGGGGA...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp TCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACCCTGGGGTTCAAGTTaGAAGTCAAAGGAATTTGGG +
Preference number: 3 (lower is better)
Translates to: SSWAWILDPGTEQPVVHVPWGSS*KSKEFG
Trigger: CCCAAATTCCTTTGACTTCAAACTTGAACCCCAGGG...TACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
3UTR-3UTR CAA 90 bp CTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTCCCTGGGGTTCAAGTTaGAAGTCAAAGGAATTTGGG +
Preference number: 3 (lower is better)
Translates to: LLGLDIGPWDRAASCSCTPWGSS*KSKEFG
Trigger: CCCAAATTCCTTTGACTTCAAACTTGAACCCCAGGG...AGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
3UTR-3UTR CAA 90 bp TCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCTGGGGTTCAAGTTaGAAGTCAAAGGAATTTGGG +
Preference number: 3 (lower is better)
Translates to: SWAWILDPGTEQPVVHVLPWGSS*KSKEFG
Trigger: CCCAAATTCCTTTGACTTCAAACTTGAACCCCAGGG...CAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
3UTR-3UTR CAA 90 bp GCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGAATTCAATGTTGTTTaGTCCATGTCCCTCCTTCAG +
Preference number: 3 (lower is better)
Translates to: AWILDPGTEQPVVHVLPEEFNVV*SMSLLQ
Trigger: CTGAAGGAGGGACATGGACAAAACAACATTGAATTC...TTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCGTAGCTTTCGTGCCATaGCCACAACATCGTGATCTG +
Preference number: 3 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLVAFVP*PQHRDL
Trigger: CAGATCACGATGTTGTGGCAATGGCACGAAAGCTAC...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp TTTCTAATTCCCGCTTTTTCTCCAAAGCCAGTTCCTCCTTTGTCTTTCCCACAGTCTTGGGCTTGGATATaGGACCCTGGGACAGAGCAG +
Preference number: 3 (lower is better)
Translates to: FLIPAFSPKPVPPLSFPQSWAWI*DPGTEQ
Trigger: CTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGA...CTGTGGGAAAGACAAAGGAGGAACTGGCTTTGGAGAAAAAGCGGGAATTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCGCTGGGAATTCAATGTaGTTTTGTCCATGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLAGNSM*FCPCPS
Trigger: GGAGGGACATGGACAAAACAACATTGAATTCCCAGC...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp TTTTTAGTAGAATTGAGCTGTCCGCTGACATCTTGTAACCGCTTTTCTAATTCCTCTTTGCGTGGGGGCTaGATGGGGCGACCACTCTCT +
Preference number: 3 (lower is better)
Translates to: FLVELSCPLTSCNRFSNSSLRGG*MGRPLS
Trigger: AGAGAGTGGTCGCCCCATCAAGCCCCCACGCAAAGA...GGAATTAGAAAAGCGGTTACAAGATGTCAGCGGACAGCTCAATTCTACTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp TTTCTAATTCCCGCTTTTTCTCCAAAGCCAGTTCCTCCTTTGTCTTTCCCACAGGTCTTTGTGGCCTTTTaGGGGAGCTTGGTGCCACTT +
Preference number: 3 (lower is better)
Translates to: FLIPAFSPKPVPPLSFPQVFVAF*GSLVPL
Trigger: AAGTGGCACCAAGCTCCCCAAAAAGGCCACAAAGAC...CTGTGGGAAAGACAAAGGAGGAACTGGCTTTGGAGAAAAAGCGGGAATTAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp TTTCTAATTCCCGCTTTTTCTCCAAAGCCAGTTCCTCCTTTGTCTTTCCCACAGGTAGCTTTCGTGCCATaGCCACAACATCGTGATCTG +
Preference number: 3 (lower is better)
Translates to: FLIPAFSPKPVPPLSFPQVAFVP*PQHRDL
Trigger: CAGATCACGATGTTGTGGCAATGGCACGAAAGCTAC...CTGTGGGAAAGACAAAGGAGGAACTGGCTTTGGAGAAAAAGCGGGAATTAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp CTGGCATCTTGGCATAACGGAACTCAAATACATCCTGTAGCTTTCGTGCCATTGCCCTGGGGTTCAAGTTaGAAGTCAAAGGAATTTGGG +
Preference number: 3 (lower is better)
Translates to: LASWHNGTQIHPVAFVPLPWGSS*KSKEFG
Trigger: CCCAAATTCCTTTGACTTCAAACTTGAACCCCAGGG...CAATGGCACGAAAGCTACAGGATGTATTTGAGTTCCGTTATGCCAAGATGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
3UTR-3UTR CAA 90 bp CTGGGTTTGAATCACGTAAAGAGGGCTCCCTGGCTTGGATTATATGCACAACTCGAATTCAATGTTGTTTaGTCCATGTCCCTCCTTCAG +
Preference number: 3 (lower is better)
Translates to: LGLNHVKRAPWLGLYAQLEFNVV*SMSLLQ
Trigger: CTGAAGGAGGGACATGGACAAAACAACATTGAATTC...GAGTTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp CATAACGGAACTCAAATACATCCTGTAGCTTTCGTGCCATTGCCACAACATCGTGAATTCAATGTTGTTTaGTCCATGTCCCTCCTTCAG +
Preference number: 3 (lower is better)
Translates to: HNGTQIHPVAFVPLPQHREFNVV*SMSLLQ
Trigger: CTGAAGGAGGGACATGGACAAAACAACATTGAATTC...ACGATGTTGTGGCAATGGCACGAAAGCTACAGGATGTATTTGAGTTCCGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
3UTR-3UTR CAA 90 bp TTTTTAGTAGAATTGAGCTGTCCGCTGACATCTTGTAACCGCTTTTCTAATTCCGTAGCTTTCGTGCCATaGCCACAACATCGTGATCTG +
Preference number: 3 (lower is better)
Translates to: FLVELSCPLTSCNRFSNSVAFVP*PQHRDL
Trigger: CAGATCACGATGTTGTGGCAATGGCACGAAAGCTAC...GGAATTAGAAAAGCGGTTACAAGATGTCAGCGGACAGCTCAATTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGCGGCGGCCTCAGCTaGGGCGGGCAACTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAGGGLS*GGQLRR
Trigger: CCTCCTTAGTTGCCCGCCTCAGCTGAGGCCGCCGCC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCGCGTGGGCGTAGCCTaGCTGAACCCGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLARVGVA*LNPPGV
Trigger: CACCCCTGGCGGGTTCAGGCAGGCTACGCCCACGCG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAACCCGCCAGGGGTGTaGCCGCAAGACGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLANPPGV*PQDAWR
Trigger: CCGCCAGGCGTCTTGCGGCCACACCCCTGGCGGGTT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCACTCCAGCACGAAATaGCGCCGCCGAGCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAHSSTK*RRRAPR
Trigger: GCGCGGGGCTCGGCGGCGCCATTTCGTGCTGGAGTG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGAGCTCCGGGCAGCTTaGCGCGCTCTGCAGACGGCG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAELRAA*RALQTA
Trigger: CGCCGTCTGCAGAGCGCGCCAAGCTGCCCGGAGCTC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAGCACCCAGATTGGCTaGCCGGGGTCACGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASTQIG*PGSRAR
Trigger: GCGGGCACGTGACCCCGGTCAGCCAATCTGGGTGCT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000374825.9
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000552587.4
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTCCCCACGGAGCGGCTaGTCCATCGGTCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASPRSG*SIGQRQ
Trigger: CTGGCGCTGACCGATGGACCAGCCGCTCCGTGGGGA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000449118.5
ENST00000549126.4
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGGCCGCAAGACGCCTaGCGGGTGGTGGTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAWPQDA*RVVVLG
Trigger: GCCGAGAACCACCACCCGCCAGGCGTCTTGCGGCCA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp TCCGCGCGCGCGCGCTCGCTCACGCGGGTGAAGAAGCTGAGTCGAAGGGGAAGGAACCCGCCAGGGGTGTaGCCGCAAGACGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SARARSLTRVKKLSRRGRNPPGV*PQDAWR
Trigger: CCGCCAGGCGTCTTGCGGCCACACCCCTGGCGGGTT...CCTTCCCCTTCGACTCAGCTTCTTCACCCGCGTGAGCGAGCGCGCGCGCGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496118.2
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCGCGGAAAGTCCGGGTaGCCTCGGTTCCCCTCACCG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLARGKSG*PRFPSP
Trigger: CGGTGAGGGGAACCGAGGCCACCCGGACTTTCCGCG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 25 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000442863.5
ENST00000448067.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGCCAAGGGGGCCGCATaGCCCAGGCCTATGTCCCGA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAAKGAA*PRPMSR
Trigger: TCGGGACATAGGCCTGGGCCATGCGGCCCCCTTGGC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374825.9
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000552587.4
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTCCAGCCTGCGGTGTaGCGACTGGAGCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALQPAV*RLELPY
Trigger: GTAGGGGAGCTCCAGTCGTCACACCGCAGGCTGGAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678250.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGCAAGGAACCGGCGCTaGCCTCAGCCGCGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAARNRR*PQPRKV
Trigger: GACTTTCCGCGGCTGAGGGCAGCGCCGGTTCCTTGC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 25 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000442863.5
ENST00000448067.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGGGGCCTCCAAAGTTaGCCTCGGCTTGGTACGGGG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAGGLQS*PRLGTG
Trigger: CCCCGTACCAAGCCGAGGGCAACTTTGGAGGCCCCC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000374825.9
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000552587.4
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCACGCCTGGCGGGTGGTaGTTCTCGGCGGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLATPGGW*FSAVRQ
Trigger: CTGCCTTACCGCCGAGAACCACCACCCGCCAGGCGT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGACACCTCCGGGGGTaGTGGGTTGGCAGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAGHLRG*WVGRGK
Trigger: CTTACCCCTGCCAACCCACCACCCCCGGAGGTGTCC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTTTCCGAACGTTCCTaGGGGTCGCGCCAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALSERS*GSRQGA
Trigger: GGCCCCTTGGCGCGACCCCCAGGAACGTTCGGAAAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000374825.9
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000552587.4
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTGCGGTGTGACGACTaGAGCTCCCCTACCGCGGAC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALRCDD*SSPTAD
Trigger: GTCCGCGGTAGGGGAGCTCCAGTCGTCACACCGCAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678250.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTTTGCGTGGGGGCTTaGTGGGGCGACCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALCVGA*WGDHSL
Trigger: GAGAGAGTGGTCGCCCCATCAAGCCCCCACGCAAAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCAGCTTGGCGCGCTCTaGAGACGGCGGACAGCAAGA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAQLGAL*RRRTAR
Trigger: TCTTGCTGTCCGCCGTCTGCAGAGCGCGCCAAGCTG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAGGCGACAAACCCCCTaGCTGGCCGGCACGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLARRQTP*LAGTKA
Trigger: TGCTTTCGTGCCGGCCAGGCAGGGGGTTTGTCGCCT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 25 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000442863.5
ENST00000448067.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAAGACGCCTGGCGGGTaGTGGTTCTCGGCGGTAAGG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAKTPGG*WFSAVR
Trigger: CCTTACCGCCGAGAACCACCACCCGCCAGGCGTCTT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGAGGCCGTTCCTCTTaGGCCTCCAGGCGACAAACC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAGGRSS*ASRRQT
Trigger: GGTTTGTCGCCTGGAGGCCCAAGAGGAACGGCCTCC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 25 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000442863.5
ENST00000448067.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCACCTCCGGGGGTGGTaGGTTGGCAGGGGTAAGTTG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAHLRGW*VGRGKL
Trigger: CAACTTACCCCTGCCAACCCACCACCCCCGGAGGTG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTTCTTAGGTTGAGGTaGGCGGGGTGCCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALLRLR*AGCPRP
Trigger: GGGCCTAGGGCACCCCGCCCACCTCAACCTAAGAAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTCCAAGCCAATTGGCTaGGCTGTGGTCCGCCGACTC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASKPIG*AVVRRL
Trigger: GAGTCGGCGGACCACAGCTCAGCCAATTGGCTTGGA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCCGGTAGACCCAGTTTaGCAGCATCCACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAPVDPV*QHPQAA
Trigger: GGCAGCCTGTGGATGCTGTCAAACTGGGTCTACCGG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 23 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000549126.4
ENST00000552587.4
ENST00000678250.1
ENST00000678778.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGTGGTTGGAAGAGGTaGGGAAGCCATCGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAGGWKR*GSHRPR
Trigger: TCTGGGGCGATGGCTTCCGCACCTCTTCCAACCACC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCACCAGGCAGAAGAGTaGCGCAGAGACCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAHQAEE*RRDPQG
Trigger: TCCCTGTGGGTCTCTGCGGCACTCTTCTGCCTGGTG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTGGGCTGGAGGAGCTaGAGTAACAGCAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALGWRS*SNSKER
Trigger: CCGCTCCTTGCTGTTACTGCAGCTCCTCCAGCCCAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAGGGGGAAGCCGTGCTaGCTTAGGCTCAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLARGKPC*LRLKTP
Trigger: GGGAGTCTTGAGCCTAAGGCAGCACGGCTTCCCCCT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGCCTAAAGCAGCACTaGCACCCCCACTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAGLKQH*HPHCHL
Trigger: CAAGTGGCAGTGGGGGTGGCAGTGCTGCTTTAGGCC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCCAAGCGGATGGAGGTaGATTGTAATGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAPSGWR*IVMAAP
Trigger: CGGGGCCGCCATTACAATCCACCTCCATCCGCTTGG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCACAGACTCCGAGGATTaGGCGGGGCCCGAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLATDSED*AGPEKG
Trigger: CCCTTTTTCGGGCCCCGCCCAATCCTCGGAGTCTGT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGACAAACCCCCTGCCTaGCCGGCACGAAAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLADKPPA*PARKQS
Trigger: AGACTGCTTTCGTGCCGGCCAGGCAGGGGGTTTGTC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 25 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000442863.5
ENST00000448067.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTGGTAACACTGCCCTaGAGCGCTGCCAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALVTLP*SAANLA
Trigger: GGCCAAGTTGGCAGCGCTCCAGGGCAGTGTTACCAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAGGCAAGTCTTTGCGTaGGGGCTTGATGGGGCGACC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLARQVFA*GLDGAT
Trigger: GGTCGCCCCATCAAGCCCCCACGCAAAGACTTGCCT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCGCCGCCTCCATCTTTaGAATCCTCTTGAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLARRLHL*NPLEGG
Trigger: TCCGCCCTCAAGAGGATTTCAAAGATGGAGGCGGCG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCGTTTTGCAGCATCTTaGCCGCAAGGAACCGGCGCT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLARFAAS*PQGTGA
Trigger: AGCGCCGGTTCCTTGCGGTCAAGATGCTGCAAAACG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 25 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000442863.5
ENST00000448067.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTGGACTTCTTAGGTTaGGGTGGGCGGGGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALDFLG*GGRGAL
Trigger: TAGGGCACCCCGCCCACCTCAACCTAAGAAGTCCAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTCGGTAGACCCAGTTTaGCAGCATCCACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASVDPV*QHPQAA
Trigger: GGCAGCCTGTGGATGCTGTCAAACTGGGTCTACCGA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTAGGGGGTCTGTACTaGCCGCTGGGACCAGTCATA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALGGLY*PLGPVI
Trigger: TATGACTGGTCCCAGCGGGCAGTACAGACCCCCTAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCCGAGATCACGCCACTaGACTCCAGCCTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAPRSRH*TPAWSL
Trigger: CAAACTCCAGGCTGGAGTGCAGTGGCGTGATCTCGG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000395287.5
ENST00000399527.5
ENST00000442219.5
ENST00000442863.5
ENST00000448067.5
ENST00000450320.5
CDS-3UTR GCA 90 bp CGCGCGCGCGCGCTCGCTCACGCGGGTGAAGAAGCTGAGTCGAAGGGGAAGGAAAATCTGGCTCCCGGCTaGTGTACCCCCAGGGGACGA +
Preference number: 4 (lower is better)
Translates to: RARALAHAGEEAESKGKENLAPG*CTPRGR
Trigger: TCGTCCCCTGGGGGTACAGCAGCCGGGAGCCAGATT...TTCCTTCCCCTTCGACTCAGCTTCTTCACCCGCGTGAGCGAGCGCGCGCGCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000496118.2
CDS-3UTR CCA 90 bp CGCGCGCGCGCGCTCGCTCACGCGGGTGAAGAAGCTGAGTCGAAGGGGAAGGAAAAGACGCCTGGCGGGTaGTGGTTCTCGGCGGTAAGG +
Preference number: 4 (lower is better)
Translates to: RARALAHAGEEAESKGKEKTPGG*WFSAVR
Trigger: CCTTACCGCCGAGAACCACCACCCGCCAGGCGTCTT...TTCCTTCCCCTTCGACTCAGCTTCTTCACCCGCGTGAGCGAGCGCGCGCGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496118.2
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCATGCACAGCCCAACTaGAGACTGCCAAGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAHAQPN*RLPSSS
Trigger: GCTCGAGCTTGGCAGTCTCCAGTTGGGCTGTGCATG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCAATTGGCTGAGCTGTaGTCCGCCGACTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAQLAEL*SADSRE
Trigger: TTCCCTGGAGTCGGCGGACCACAGCTCAGCCAATTG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCATCTCCAAGCCAATTaGCTGAGCTGTGGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAHLQAN*LSCGPP
Trigger: CGGCGGACCACAGCTCAGCCAATTGGCTTGGAGATG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAGACCCACAGGGAAGTaGCAACCCGCCACATCTCCA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLARPTGK*QPATSP
Trigger: TGGAGATGTGGCGGGTTGCCACTTCCCTGTGGGTCT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCGAAAGCAGTCTCTTTaGGGCCTCTCGGAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLARKQSL*GLSESS
Trigger: GGAGCTCTCCGAGAGGCCCCAAAGAGACTGCTTTCG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTCGTCCTGGCTTTTTaGGATTGGACACCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALVLAF*DWTPPG
Trigger: CCCCGGAGGTGTCCAATCCCAAAAAGCCAGGACGAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp CGCGCGCGCGCGCTCGCTCACGCGGGTGAAGAAGCTGAGTCGAAGGGGAAGGAATCCAAGCCAATTGGCTaGGCTGTGGTCCGCCGACTC +
Preference number: 4 (lower is better)
Translates to: RARALAHAGEEAESKGKESKPIG*AVVRRL
Trigger: GAGTCGGCGGACCACAGCTCAGCCAATTGGCTTGGA...TTCCTTCCCCTTCGACTCAGCTTCTTCACCCGCGTGAGCGAGCGCGCGCGCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496118.2
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCCCCAGGTAATTTGTTaGTGTCCAGGCTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAPQVIC*CPGSAA
Trigger: GGCAGCTGAGCCTGGACATCAACAAATTACCTGGGG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp CGCGCGCGCGCGCTCGCTCACGCGGGTGAAGAAGCTGAGTCGAAGGGGAAGGAACACCAGGCAGAAGAGTaGCGCAGAGACCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: RARALAHAGEEAESKGKEHQAEE*RRDPQG
Trigger: TCCCTGTGGGTCTCTGCGGCACTCTTCTGCCTGGTG...TTCCTTCCCCTTCGACTCAGCTTCTTCACCCGCGTGAGCGAGCGCGCGCGCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496118.2
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAGCCCGCTGTTGGTCTaGAGGGATTCCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASPLLV*RDSLFL
Trigger: CAAGAAGAGGGAATCCCTGCAGACCAACAGCGGGCT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTGGCAGGGGTAAGTTaGAAAGCAGGCACCGAAGCC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALAGVS*KAGTEA
Trigger: GGCTTCGGTGCCTGCTTTGCAACTTACCCCTGCCAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGGGGTCCAGCAGAGTaGAAGGACTTGAGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAGGPAE*KDLRSG
Trigger: TCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCATAGGGGGAAGCCGTaGTGCCTTAGGCTCAAGACT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAHRGKP*CLRLKT
Trigger: AGTCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCACTGCCACCCCCACTaGCACTTGCTTTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAHCHPH*HLLSWT
Trigger: AGTCCAAGAAAGCAAGTGGCAGTGGGGGTGGCAGTG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCAGCCTGGAGTTTGGTaGCACTTCCTCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAQPGVW*HFLQKV
Trigger: GACCTTCTGGAGGAAGTGGCACCAAACTCCAGGCTG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395287.5
ENST00000399527.5
ENST00000442219.5
ENST00000442863.5
ENST00000448067.5
ENST00000450320.5
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGGAAAGAGGGTGGTTaGAAGAGGTGCGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAGKEGG*KRCGSH
Trigger: ATGGCTTCCGCACCTCTTCCAACCACCCTCTTTCCC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTCCAGGGAAAGAGGGTaGTTGGAAGAGGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASRERG*LEEVRK
Trigger: CTTCCGCACCTCTTCCAACCACCCTCTTTCCCTGGA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGACACTCCAGCACGAAATaGCGCCGCCGAGCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRHSSTK*RRRAPR
Trigger: GCGCGGGGCTCGGCGGCGCCATTTCGTGCTGGAGTG...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCATAACCCGCTAAGTTaGGGGGAGGCCGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAHNPLS*GEAVPL
Trigger: AAGAGGAACGGCCTCCCCCCAACTTAGCGGGTTATG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 25 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000442863.5
ENST00000448067.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGCACCGAAGCCATTGTaGGGCTCTCAAAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAAPKPL*GSQSPH
Trigger: ATGAGGGCTTTGAGAGCCCCACAATGGCTTCGGTGC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCACTCTGAAGACGATTTaGCCAAGCCAGGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLATLKTI*PSQGAW
Trigger: CCATGCCCCCTGGCTTGGCCAAATCGTCTTCAGAGT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTTGGGCTTGGATATTaGACCCTGGGACAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALGLGY*TLGQSS
Trigger: GCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCATACGAGTTCAGCATaGCTGCCGCAGACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAHTSSA*LPQTRN
Trigger: GTTCCTGGTCTGCGGCAGCCATGCTGAACTCGTATG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374825.9
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCACTGCACTCCAGCCTaGAGTTTGGTGCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAHCTPA*SLVPLP
Trigger: AGGAAGTGGCACCAAACTCCAGGCTGGAGTGCAGTG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395287.5
ENST00000399527.5
ENST00000442219.5
ENST00000442863.5
ENST00000448067.5
ENST00000450320.5
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTCTTTGAAATCCTCTTaGGGGCGGAGTAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASLKSS*GRSRGG
Trigger: ACCCCCTCTACTCCGCCCTCAAGAGGATTTCAAAGA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTTCCCAAGCTTCCATaGACAGCCCAACTGGAGACT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALPKLP*TAQLET
Trigger: AGTCTCCAGTTGGGCTGTGCATGGAAGCTTGGGAAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGCTCGTTCTAGAGGCTaGTCCACTCCAGCACGAAAT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAARSRG*STPARN
Trigger: ATTTCGTGCTGGAGTGGAGCAGCCTCTAGAACGAGC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTGCCGGAATGGCCATaGGAACTGATGTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALPEWP*ELMFPQ
Trigger: CTGTGGAAACATCAGTTCGCATGGCCATTCCGGCAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCAGAGGAGCTCTCACTaGTACTTTCCTCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAQRSSH*YFPHWR
Trigger: CCTCCAGTGAGGAAAGTAGCAGTGAGAGCTCCTCTG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTTTGGGGAGCTTGGTaGCACTTCCTCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAFWGAW*HFLQKV
Trigger: GACCTTCTGGAGGAAGTGGCACCAAGCTCCCCAAAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 28 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000446150.3
ENST00000447730.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGACCTGCGGAGCCTTCCTaGCCCATCTGGCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRPAEPS*PIWPDP
Trigger: GGGGTCAGGCCAGATGGGGCAGGAAGGCTCCGCAGG...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCACCTGCGGAGCCTTCCTaGCCCATCTGGCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSPAEPS*PIWPDP
Trigger: GGGGTCAGGCCAGATGGGGCAGGAAGGCTCCGCAGG...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp TCCGCGCGCGCGCGCTCGCTCACGCGGGTGAAGAAGCTGAGTCGAAGGGGAAGGGGGAAAGAGGGTGGTTaGAAGAGGTGCGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SARARSLTRVKKLSRRGRGKEGG*KRCGSH
Trigger: ATGGCTTCCGCACCTCTTCCAACCACCCTCTTTCCC...CCTTCCCCTTCGACTCAGCTTCTTCACCCGCGTGAGCGAGCGCGCGCGCGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496118.2
CDS-3UTR CCA 90 bp TCCGCGCGCGCGCGCTCGCTCACGCGGGTGAAGAAGCTGAGTCGAAGGGGAAGGTCCAGGGAAAGAGGGTaGTTGGAAGAGGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SARARSLTRVKKLSRRGRSRERG*LEEVRK
Trigger: CTTCCGCACCTCTTCCAACCACCCTCTTTCCCTGGA...CCTTCCCCTTCGACTCAGCTTCTTCACCCGCGTGAGCGAGCGCGCGCGCGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496118.2
CDS-3UTR CCA 90 bp CGCGCGCGCGCGCTCGCTCACGCGGGTGAAGAAGCTGAGTCGAAGGGGAAGGAACAATTGGCTGAGCTGTaGTCCGCCGACTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RARALAHAGEEAESKGKEQLAEL*SADSRE
Trigger: TTCCCTGGAGTCGGCGGACCACAGCTCAGCCAATTG...TTCCTTCCCCTTCGACTCAGCTTCTTCACCCGCGTGAGCGAGCGCGCGCGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496118.2
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGGAGCTTTTTCTATTaGCCAGCCGCAACGATGACG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAGSFFY*PAATMT
Trigger: CGTCATCGTTGCGGCTGGCCAATAGAAAAAGCTCCC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 19 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGTGGTACACTCCAGCACGAAATaGCGCCGCCGAGCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: GGLAGEPGAKMAVGVGVVHSSTK*RRRAPR
Trigger: GCGCGGGGCTCGGCGGCGCCATTTCGTGCTGGAGTG...TACCACCCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGATGAACACGAAAAGTaGTTTAGGGAGCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLADEHEK*FREPPP
Trigger: AGGCGGCGGCTCCCTAAACCACTTTTCGTGTTCATC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACTGCGAGCTCCGGGCAGCTTaGCGCGCTCTGCAGACGGCG +
Preference number: 4 (lower is better)
Translates to: PPRPPHLPPPLPQRSSHCELRAA*RALQTA
Trigger: CGCCGTCTGCAGAGCGCGCCAAGCTGCCCGGAGCTC...GCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCCAGGGAGCTTATTGTaGGGAGTCACGTTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAPGSLL*GVTFCS
Trigger: GCTGCAAAACGTGACTCCCCACAATAAGCTCCCTGG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 25 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000442863.5
ENST00000448067.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCACAGGCTGCCGGAATaGCCATGCGAACTGATGTTT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAHRLPE*PCELMF
Trigger: AAACATCAGTTCGCATGGCCATTCCGGCAGCCTGTG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTGGCCCCCTTCTTGTaGCTGTTCTTAGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALAPFL*LFLGMV
Trigger: GACCATCCCTAAGAACAGCCACAAGAAGGGGGCCAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCCTTTTTGGGGAGCTTaGTGCCACTTCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAPFWGA*CHFLQK
Trigger: CTTCTGGAGGAAGTGGCACCAAGCTCCCCAAAAAGG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 28 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000446150.3
ENST00000447730.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGAGGGCTCCCTGGCTTaGATTATATGCACAACTCGG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAEGSLA*IICTTR
Trigger: CCGAGTTGTGCATATAATCCAAGCCAGGGAGCCCTC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAAGTCCTGGGAGGGATaGCTTAAGGGAAAAACCCTC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAKSWEG*LKGKTL
Trigger: GAGGGTTTTTCCCTTAAGTCATCCCTCCCAGGACTT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000675761.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGCCAGCCGCAACGATaGCGTCATAAACTTCATTTC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAGQPQR*RHKLHF
Trigger: GAAATGAAGTTTATGACGTCATCGTTGCGGCTGGCC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCAACTAAGGAGGGACTaGCTCTTCAAAAGACGGTCC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAQLRRD*LFKRRS
Trigger: GGACCGTCTTTTGAAGAGTCAGTCCCTCCTTAGTTG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAATGGCCATGCGAACTaGTGTTTCCACAGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLANGHAN*CFHRAF
Trigger: GAAGGCTCTGTGGAAACATCAGTTCGCATGGCCATT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGAAGTGGAGAGGAAATaGCTGATGGGTGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAEVERK*LMGGEC
Trigger: ACATTCCCCACCCATCAGTCATTTCCTCTCCACTTC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAGCAAGGAACCGGCGCTaGCCTCAGCCGCGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSARNRR*PQPRKV
Trigger: GACTTTCCGCGGCTGAGGGCAGCGCCGGTTCCTTGC...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAGCAGCAAACTCCTGTaGATCCCGGTAATCACGGTT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASSKLL*IPVITV
Trigger: AACCGTGATTACCGGGATGCACAGGAGTTTGCTGCT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCGTGACACTGCTACTTaGTGTGCAGAGGATGACTCT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLARDTAT*CAEDDS
Trigger: AGAGTCATCCTCTGCACAGCAAGTAGCAGTGTCACG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp TGGAGGAGCTGCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTCCTGCGGAGCCTTCCTaGCCCATCTGGCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: WRSCSNSKERGSSRVQGLPAEPS*PIWPDP
Trigger: GGGGTCAGGCCAGATGGGGCAGGAAGGCTCCGCAGG...AAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGCAGCTCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCTGCCAACTTGGCCCCCTTCTTGTGGCTGTTCTTAGGGATGGTCACTACCAGCAACCCGCCAGGGGTGTaGCCGCAAGACGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: AANLAPFLWLFLGMVTTSNPPGV*PQDAWR
Trigger: CCGCCAGGCGTCTTGCGGCCACACCCCTGGCGGGTT...GCTGGTAGTGACCATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTTGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CTTCCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACCACTCCAGCACGAAATaGCGCCGCCGAGCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LPPRPPHLPPPLPQRSSHHSSTK*RRRAPR
Trigger: GCGCGGGGCTCGGCGGCGCCATTTCGTGCTGGAGTG...GTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CTCCTGTGCATCCCGGTAATCACGGTTCTCCATCTTCCGCTGCAGAAGGAGGCACACTCCAGCACGAAATaGCGCCGCCGAGCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LLCIPVITVLHLPLQKEAHSSTK*RRRAPR
Trigger: GCGCGGGGCTCGGCGGCGCCATTTCGTGCTGGAGTG...TGCCTCCTTCTGCAGCGGAAGATGGAGAACCGTGATTACCGGGATGCACAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR CCA 90 bp GCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGACACTCCAGCACGAAATaGCGCCGCCGAGCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: AVTARSGGPAECKDLRSGHSSTK*RRRAPR
Trigger: GCGCGGGGCTCGGCGGCGCCATTTCGTGCTGGAGTG...TCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCCATTTCCAAGCGGATaGAGGTGGATTGTAATGGCG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAPFPSG*RWIVMA
Trigger: CGCCATTACAATCCACCTCCATCCGCTTGGAAATGG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCGTTTCGATCTCGGATaGAGGCGGATGAACACGAAA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLARFDLG*RRMNTK
Trigger: TTTCGTGTTCATCCGCCTCCATCCGAGATCGAAACG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAATATAGCCCGCTGTTaGTCTGCAGGGATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLANIARC*SAGIPS
Trigger: AGAGGGAATCCCTGCAGACCAACAGCGGGCTATATT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000449085.4
ENST00000449118.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGAGAGCTCCGGGCAGCTTaGCGCGCTCTGCAGACGGCG +
Preference number: 4 (lower is better)
Translates to: AVTARSGGPAECKDLRSGELRAA*RALQTA
Trigger: CGCCGTCTGCAGAGCGCGCCAAGCTGCCCGGAGCTC...TCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp AGAAGCTGCACAGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCACAGAGCTCCGGGCAGCTTaGCGCGCTCTGCAGACGGCG +
Preference number: 4 (lower is better)
Translates to: RSCTGRKTHLSLPTPDTTELRAA*RALQTA
Trigger: CGCCGTCTGCAGAGCGCGCCAAGCTGCCCGGAGCTC...TGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCTGTGCAGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR CCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGGACACCTCCGGGGGTaGTGGGTTGGCAGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGGHLRG*WVGRGK
Trigger: CTTACCCCTGCCAACCCACCACCCCCGGAGGTGTCC...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGTAGGTATTGCAGCTaGTTGGTAACTCGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLACRYCS*LVTRPG
Trigger: GCCAGGACGAGTTACCAACCAGCTGCAATACCTACA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTGGATATTGGACCCTaGGACAGAGCAGCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLALDIGP*DRAASC
Trigger: ACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTCTTTGTGGCCTTTTTaGGGAGCTTGGTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASLWPF*GAWCHF
Trigger: GAAGTGGCACCAAGCTCCCCAAAAAGGCCACAAAGA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 28 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000446150.3
ENST00000447730.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGTGGTAGCAGGTGGGGCAGGGTaGTCTAGGGGTCCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GGLAGEPGAKMAVGVGVVAGGAG*SRGPVL
Trigger: CAGGACCGGACCCCTAGACCACCCTGCCCCACCTGC...TACCACCCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCAGCAGCGAAGAATCTaGATCCTAAAGCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAQQRRI*ILKPSR
Trigger: CCTGGAAGGCTTTAGGATCCAGATTCTTCGCTGCTG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000374825.9
ENST00000399529.7
ENST00000414731.6
ENST00000438194.6
ENST00000552587.4
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTCTTTGTGGCCTTTTTaGGGAGCCTGTAATCCTGGC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASLWPF*GACNPG
Trigger: GCCAGGATTACAGGCTCCCCAAAAAGGCCACAAAGA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000395287.5
ENST00000399527.5
ENST00000442219.5
ENST00000442863.5
ENST00000448067.5
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAAGGAAGTTGGCGCCTaGGAACAACCTCAGTTCACA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAKEVGA*EQPQFT
Trigger: TGTGAACTGAGGTTGTTCCCAGGCGCCAACTTCCTT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678250.1
CDS-3UTR TCA 90 bp GACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGCTGTTCCTGTAGGCGGCGGCCTCAGCTaGGGCGGGCAACTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DPGTEQPVVHVLPEAVPVGGGLS*GGQLRR
Trigger: CCTCCTTAGTTGCCCGCCTCAGCTGAGGCCGCCGCC...TACAGGAACAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp CCAGGGGGCATGGCAGTAGAGACTGGTAAAGGCCCTGGTTCTAGTGGTTCATCTGGCGGCGGCCTCAGCTaGGGCGGGCAACTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGGMAVETGKGPGSSGSSGGGLS*GGQLRR
Trigger: CCTCCTTAGTTGCCCGCCTCAGCTGAGGCCGCCGCC...AGATGAACCACTAGAACCAGGGCCTTTACCAGTCTCTACTGCCATGCCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCACAGCTTGGCGCGCTCTaGAGACGGCGGACAGCAAGA +
Preference number: 4 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSQLGAL*RRRTAR
Trigger: TCTTGCTGTCCGCCGTCTGCAGAGCGCGCCAAGCTG...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGACAGCTTGGCGCGCTCTaGAGACGGCGGACAGCAAGA +
Preference number: 4 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRQLGAL*RRRTAR
Trigger: TCTTGCTGTCCGCCGTCTGCAGAGCGCGCCAAGCTG...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGCAGCTTGGCGCGCTCTaGAGACGGCGGACAGCAAGA +
Preference number: 4 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGQLGAL*RRRTAR
Trigger: TCTTGCTGTCCGCCGTCTGCAGAGCGCGCCAAGCTG...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGAGGCGACAAACCCCCTaGCTGGCCGGCACGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGRRQTP*LAGTKA
Trigger: TGCTTTCGTGCCGGCCAGGCAGGGGGTTTGTCGCCT...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAGGGGTGGTAGTATCTaGTTTCCGCTTTACGCCTTT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLARGGSI*FPLYAF
Trigger: AAAGGCGTAAAGCGGAAAGCAGATACTACCACCCCT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp AGCTGCACAGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCACAAGACCTGCGGAGCCTTCCTaGCCCATCTGGCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: SCTGRKTHLSLPTPDTTRPAEPS*PIWPDP
Trigger: GGGGTCAGGCCAGATGGGGCAGGAAGGCTCCGCAGG...TCTTGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCTGTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678778.1
CDS-3UTR CCA 90 bp CTTCCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACTCCCCACGGAGCGGCTaGTCCATCGGTCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: LPPRPPHLPPPLPQRSSHSPRSG*SIGQRQ
Trigger: CTGGCGCTGACCGATGGACCAGCCGCTCCGTGGGGA...GTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
CDS-3UTR CCA 90 bp TGGAGGAGCTGCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTACGCCTGGCGGGTGGTaGTTCTCGGCGGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: WRSCSNSKERGSSRVQGLTPGGW*FSAVRQ
Trigger: CTGCCTTACCGCCGAGAACCACCACCCGCCAGGCGT...AAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGCAGCTCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACTGCACGCCTGGCGGGTGGTaGTTCTCGGCGGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PPRPPHLPPPLPQRSSHCTPGGW*FSAVRQ
Trigger: CTGCCTTACCGCCGAGAACCACCACCCGCCAGGCGT...GCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGAAGACGCCTGGCGGGTaGTGGTTCTCGGCGGTAAGG +
Preference number: 4 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGKTPGG*WFSAVR
Trigger: CCTTACCGCCGAGAACCACCACCCGCCAGGCGTCTT...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGAAAGACGCCTGGCGGGTaGTGGTTCTCGGCGGTAAGG +
Preference number: 4 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRKTPGG*WFSAVR
Trigger: CCTTACCGCCGAGAACCACCACCCGCCAGGCGTCTT...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGATGGCCGCAAGACGCCTaGCGGGTGGTGGTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: AVTARSGGPAECKDLRSGWPQDA*RVVVLG
Trigger: GCCGAGAACCACCACCCGCCAGGCGTCTTGCGGCCA...TCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CTCCTGTGCATCCCGGTAATCACGGTTCTCCATCTTCCGCTGCAGAAGGAGGCATGGCCGCAAGACGCCTaGCGGGTGGTGGTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: LLCIPVITVLHLPLQKEAWPQDA*RVVVLG
Trigger: GCCGAGAACCACCACCCGCCAGGCGTCTTGCGGCCA...TGCCTCCTTCTGCAGCGGAAGATGGAGAACCGTGATTACCGGGATGCACAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR CCA 90 bp AGAAGCTGCACAGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCACATGGCCGCAAGACGCCTaGCGGGTGGTGGTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: RSCTGRKTHLSLPTPDTTWPQDA*RVVVLG
Trigger: GCCGAGAACCACCACCCGCCAGGCGTCTTGCGGCCA...TGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCTGTGCAGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR CCA 90 bp CCAGGGGGCATGGCAGTAGAGACTGGTAAAGGCCCTGGTTCTAGTGGTTCATCTGAGCTCCGGGCAGCTTaGCGCGCTCTGCAGACGGCG +
Preference number: 4 (lower is better)
Translates to: PGGMAVETGKGPGSSGSSELRAA*RALQTA
Trigger: CGCCGTCTGCAGAGCGCGCCAAGCTGCCCGGAGCTC...AGATGAACCACTAGAACCAGGGCCTTTACCAGTCTCTACTGCCATGCCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGACGCGGAAAGTCCGGGTaGCCTCGGTTCCCCTCACCG +
Preference number: 4 (lower is better)
Translates to: AVTARSGGPAECKDLRSGRGKSG*PRFPSP
Trigger: CGGTGAGGGGAACCGAGGCCACCCGGACTTTCCGCG...TCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp AGAAGCTGCACAGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCACACGCGGAAAGTCCGGGTaGCCTCGGTTCCCCTCACCG +
Preference number: 4 (lower is better)
Translates to: RSCTGRKTHLSLPTPDTTRGKSG*PRFPSP
Trigger: CGGTGAGGGGAACCGAGGCCACCCGGACTTTCCGCG...TGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCTGTGCAGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR CCA 90 bp CATCAGAAGCTGCACAGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCGCGGAAAGTCCGGGTaGCCTCGGTTCCCCTCACCG +
Preference number: 4 (lower is better)
Translates to: HQKLHRQEDSPFPANPRHRGKSG*PRFPSP
Trigger: CGGTGAGGGGAACCGAGGCCACCCGGACTTTCCGCG...GTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCTGTGCAGCTTCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR CCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGACACCTCCGGGGGTGGTaGGTTGGCAGGGGTAAGTTG +
Preference number: 4 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRHLRGW*VGRGKL
Trigger: CAACTTACCCCTGCCAACCCACCACCCCCGGAGGTG...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCACACCTCCGGGGGTGGTaGGTTGGCAGGGGTAAGTTG +
Preference number: 4 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSHLRGW*VGRGKL
Trigger: CAACTTACCCCTGCCAACCCACCACCCCCGGAGGTG...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACTGCGGACACCTCCGGGGGTaGTGGGTTGGCAGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: PPRPPHLPPPLPQRSSHCGHLRG*WVGRGK
Trigger: CTTACCCCTGCCAACCCACCACCCCCGGAGGTGTCC...GCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGTTGGTAACTCGTCCTaGCTTTTTGGGATTGGACAC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAVGNSS*LFGIGH
Trigger: GTGTCCAATCCCAAAAAGCCAGGACGAGTTACCAAC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTTTCCTCTTGGGCTTaGATATTGGACCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAFSSWA*ILDPGT
Trigger: TGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAAAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGACTTCTTAGGTTGAGGTaGGCGGGGTGCCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRLLRLR*AGCPRP
Trigger: GGGCCTAGGGCACCCCGCCCACCTCAACCTAAGAAG...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGAGCAGGTGGGGCAGGGTaGTCTAGGGGTCCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: AVTARSGGPAECKDLRSGAGGAG*SRGPVL
Trigger: CAGGACCGGACCCCTAGACCACCCTGCCCCACCTGC...TCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCTGCCAACTTGGCCCCCTTCTTGTGGCTGTTCTTAGGGATGGTCACTACCAGCGCAGGTGGGGCAGGGTaGTCTAGGGGTCCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: AANLAPFLWLFLGMVTTSAGGAG*SRGPVL
Trigger: CAGGACCGGACCCCTAGACCACCCTGCCCCACCTGC...GCTGGTAGTGACCATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTTGGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp ACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGAGAGGAAGCAGGTGGGGCAGGGTaGTCTAGGGGTCCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TARSGGPAECKDLRSGEEAGGAG*SRGPVL
Trigger: CAGGACCGGACCCCTAGACCACCCTGCCCCACCTGC...TTCCTCTCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTCTTTGTGGCCTTTTTaGGGAGCCTGTAATTCTGGC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLASLWPF*GACNSG
Trigger: GCCAGAATTACAGGCTCCCCAAAAAGGCCACAAAGA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450320.5
CDS-3UTR TCA 90 bp TGTAGGGCTTCCGGGGTTTCTTACGTAGGCAGGAAAGGACATAGCGCTCAAGCTGGCGGCGGCCTCAGCTaGGGCGGGCAACTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: CRASGVSYVGRKGHSAQAGGGLS*GGQLRR
Trigger: CCTCCTTAGTTGCCCGCCTCAGCTGAGGCCGCCGCC...AGCTTGAGCGCTATGTCCTTTCCTGCCTACGTAAGAAACCCCGGAAGCCCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAGAGACGGCAGGCACCTaGTGGGCACTGGTAACACTG +
Preference number: 4 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSETAGT*WALVTL
Trigger: CAGTGTTACCAGTGCCCATCAGGTGCCTGCCGTCTC...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGTGGTACTTTGCGTGGGGGCTTaGTGGGGCGACCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: GGLAGEPGAKMAVGVGVVLCVGA*WGDHSL
Trigger: GAGAGAGTGGTCGCCCCATCAAGCCCCCACGCAAAG...TACCACCCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAACGCGTGGGCGTAGCCTaGCTGAACCCGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: AWILDPGTEQPVVHVLPERVGVA*LNPPGV
Trigger: CACCCCTGGCGGGTTCAGGCAGGCTACGCCCACGCG...TTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGGTGGTTGGAAGAGGTaGGGAAGCCATCGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGGGWKR*GSHRPR
Trigger: TCTGGGGCGATGGCTTCCGCACCTCTTCCAACCACC...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGCACCAGGCAGAAGAGTaGCGCAGAGACCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGHQAEE*RRDPQG
Trigger: TCCCTGTGGGTCTCTGCGGCACTCTTCTGCCTGGTG...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp CCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACTGCAGGCGACAAACCCCCTaGCTGGCCGGCACGAAAGCA +
Preference number: 4 (lower is better)
Translates to: PPRPPHLPPPLPQRSSHCRRQTP*LAGTKA
Trigger: TGCTTTCGTGCCGGCCAGGCAGGGGGTTTGTCGCCT...GCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGAGCAAGGAACCGGCGCTaGCCTCAGCCGCGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: AVTARSGGPAECKDLRSGARNRR*PQPRKV
Trigger: GACTTTCCGCGGCTGAGGGCAGCGCCGGTTCCTTGC...TCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp AGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCACAAGAAGAGCCCTGCAAGGAACCGGCGCTaGCCTCAGCCGCGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: RQEDSPFPANPRHHKKSPARNRR*PQPRKV
Trigger: GACTTTCCGCGGCTGAGGGCAGCGCCGGTTCCTTGC...AGGGCTCTTCTTGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR GCA 90 bp CTCCTGTGCATCCCGGTAATCACGGTTCTCCATCTTCCGCTGCAGAAGGAGGCAGCAAGGAACCGGCGCTaGCCTCAGCCGCGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LLCIPVITVLHLPLQKEAARNRR*PQPRKV
Trigger: GACTTTCCGCGGCTGAGGGCAGCGCCGGTTCCTTGC...TGCCTCCTTCTGCAGCGGAAGATGGAGAACCGTGATTACCGGGATGCACAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR GCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCACCTTGTGTAGGTATTaGAGCTGGTTGGTAACTCGT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLATLCRY*SWLVTR
Trigger: ACGAGTTACCAACCAGCTGCAATACCTACACAAGGT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGAGGCCTAAAGCAGCACTaGCACCCCCACTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRGLKQH*HPHCHL
Trigger: CAAGTGGCAGTGGGGGTGGCAGTGCTGCTTTAGGCC...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAGGCCTAAAGCAGCACTaGCACCCCCACTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSGLKQH*HPHCHL
Trigger: CAAGTGGCAGTGGGGGTGGCAGTGCTGCTTTAGGCC...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CTCACCTTTCCCTGCCAACCCCAGACACCACAAGAAGAGCCCTCTCTTGAGAGCACGCCTGGCGGGTGGTaGTTCTCGGCGGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LTFPCQPQTPQEEPSLESTPGGW*FSAVRQ
Trigger: CTGCCTTACCGCCGAGAACCACCACCCGCCAGGCGT...GCTCTCAAGAGAGGGCTCTTCTTGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR CCA 90 bp AGAAGCTGCACAGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCACAACGCCTGGCGGGTGGTaGTTCTCGGCGGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RSCTGRKTHLSLPTPDTTTPGGW*FSAVRQ
Trigger: CTGCCTTACCGCCGAGAACCACCACCCGCCAGGCGT...TGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCTGTGCAGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR CCA 90 bp CCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACTGCAAGACGCCTGGCGGGTaGTGGTTCTCGGCGGTAAGG +
Preference number: 4 (lower is better)
Translates to: PPRPPHLPPPLPQRSSHCKTPGG*WFSAVR
Trigger: CCTTACCGCCGAGAACCACCACCCGCCAGGCGTCTT...GCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GAAGCTGAGTCGAAGGGGAAGGAACACCTCTCCGCGGGAGCTTTTTCTATTGGCTGGCCGCAAGACGCCTaGCGGGTGGTGGTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: EAESKGKEHLSAGAFSIGWPQDA*RVVVLG
Trigger: GCCGAGAACCACCACCCGCCAGGCGTCTTGCGGCCA...GCCAATAGAAAAAGCTCCCGCGGAGAGGTGTTCCTTCCCCTTCGACTCAGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496118.2
CDS-3UTR CCA 90 bp CAACTTGGCCCCCTTCTTGTGGCTGTTCTTAGGGATGGTCACTACCAGCTCTTGAACCCGCCAGGGGTGTaGCCGCAAGACGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QLGPLLVAVLRDGHYQLLNPPGV*PQDAWR
Trigger: CCGCCAGGCGTCTTGCGGCCACACCCCTGGCGGGTT...CAAGAGCTGGTAGTGACCATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAAACCCGCCAGGGGTGTaGCCGCAAGACGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: AWILDPGTEQPVVHVLPENPPGV*PQDAWR
Trigger: CCGCCAGGCGTCTTGCGGCCACACCCCTGGCGGGTT...TTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAACACTCCAGCACGAAATaGCGCCGCCGAGCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: AWILDPGTEQPVVHVLPEHSSTK*RRRAPR
Trigger: GCGCGGGGCTCGGCGGCGCCATTTCGTGCTGGAGTG...TTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGCCAAGCGGATGGAGGTaGATTGTAATGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGPSGWR*IVMAAP
Trigger: CGGGGCCGCCATTACAATCCACCTCCATCCGCTTGG...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGAGCTCCGGGCAGCTTaGCGCGCTCTGCAGACGGCG +
Preference number: 4 (lower is better)
Translates to: AWILDPGTEQPVVHVLPEELRAA*RALQTA
Trigger: CGCCGTCTGCAGAGCGCGCCAAGCTGCCCGGAGCTC...TTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCGAGCTCCGGGCAGCTTaGCGCGCTCTGCAGACGGCG +
Preference number: 4 (lower is better)
Translates to: LGLGYWTLGQSSQLFMYCELRAA*RALQTA
Trigger: CGCCGTCTGCAGAGCGCGCCAAGCTGCCCGGAGCTC...GCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGCTGTTCCTGTACGCGGAAAGTCCGGGTaGCCTCGGTTCCCCTCACCG +
Preference number: 4 (lower is better)
Translates to: DPGTEQPVVHVLPEAVPVRGKSG*PRFPSP
Trigger: CGGTGAGGGGAACCGAGGCCACCCGGACTTTCCGCG...TACAGGAACAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp AGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGAGAGGAAATGACTCGCGGAAAGTCCGGGTaGCCTCGGTTCCCCTCACCG +
Preference number: 4 (lower is better)
Translates to: RSGGPAECKDLRSGEEMTRGKSG*PRFPSP
Trigger: CGGTGAGGGGAACCGAGGCCACCCGGACTTTCCGCG...AGTCATTTCCTCTCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CTCACCTTTCCCTGCCAACCCCAGACACCACAAGAAGAGCCCTCTCTTGAGAGCGGACACCTCCGGGGGTaGTGGGTTGGCAGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: LTFPCQPQTPQEEPSLESGHLRG*WVGRGK
Trigger: CTTACCCCTGCCAACCCACCACCCCCGGAGGTGTCC...GCTCTCAAGAGAGGGCTCTTCTTGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR CCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGAGGAGCGCTGCCAACTTaGCCCCCTTCTTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRGALPT*PPSCGC
Trigger: ACAGCCACAAGAAGGGGGCCAAGTTGGCAGCGCTCC...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGCAGAAGCATCCACTaGTTTATAGAAAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLACRSIH*FIERPS
Trigger: GCTTGGCCTTTCTATAAACCAGTGGATGCTTCTGCA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 30 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442863.5
ENST00000446150.3
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGCTACTTTCCTCACTaGAGGACTCTGAAGACGATT +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLACYFPH*RTLKTI
Trigger: AATCGTCTTCAGAGTCCTCCAGTGAGGAAAGTAGCA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGTGGTACTTCTTAGGTTGAGGTaGGCGGGGTGCCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: GGLAGEPGAKMAVGVGVVLLRLR*AGCPRP
Trigger: GGGCCTAGGGCACCCCGCCCACCTCAACCTAAGAAG...TACCACCCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGTAAAGAGGGCTCCCTaGCTTGGATTATATGCACAA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAVKRAP*LGLYAQ
Trigger: TTGTGCATATAATCCAAGCCAGGGAGCCCTCTTTAC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 35 transcripts:
ENST00000374825.9
ENST00000374831.8
ENST00000383108.6
ENST00000395287.5
ENST00000399527.5
ENST00000399528.5
ENST00000399529.7
ENST00000414731.6
ENST00000425016.5
ENST00000427021.3
ENST00000436979.5
ENST00000438194.6
ENST00000439194.3
ENST00000442219.5
ENST00000442863.5
ENST00000446150.3
ENST00000447730.5
ENST00000448067.5
ENST00000449025.5
ENST00000449085.4
ENST00000449118.5
ENST00000450320.5
ENST00000452539.5
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000518754.1
ENST00000549126.4
ENST00000552587.4
ENST00000675761.1
ENST00000677085.1
ENST00000678250.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CCAGGGGGCATGGCAGTAGAGACTGGTAAAGGCCCTGGTTCTAGTGGTTCATCTGCAGGTGGGGCAGGGTaGTCTAGGGGTCCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PGGMAVETGKGPGSSGSSAGGAG*SRGPVL
Trigger: CAGGACCGGACCCCTAGACCACCCTGCCCCACCTGC...AGATGAACCACTAGAACCAGGGCCTTTACCAGTCTCTACTGCCATGCCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGCTGTTCCTGTAGCAGGTGGGGCAGGGTaGTCTAGGGGTCCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: DPGTEQPVVHVLPEAVPVAGGAG*SRGPVL
Trigger: CAGGACCGGACCCCTAGACCACCCTGCCCCACCTGC...TACAGGAACAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCAGGGTGGTCTAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGAAGAATCTTGGGCCTaGTTTCTGTTCCTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GQGGLGVRSCGAFLPHLAEESWA*FLFLSR
Trigger: TCTGCTTAGGAACAGAAACCAGGCCCAAGATTCTTC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTAGACCACCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678250.1
CDS-3UTR TCA 90 bp TGGAGGAGCTGCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTTCCAAGCCAATTGGCTaGGCTGTGGTCCGCCGACTC +
Preference number: 4 (lower is better)
Translates to: WRSCSNSKERGSSRVQGLSKPIG*AVVRRL
Trigger: GAGTCGGCGGACCACAGCTCAGCCAATTGGCTTGGA...AAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGCAGCTCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGTGGTATCCAAGCCAATTGGCTaGGCTGTGGTCCGCCGACTC +
Preference number: 4 (lower is better)
Translates to: GGLAGEPGAKMAVGVGVVSKPIG*AVVRRL
Trigger: GAGTCGGCGGACCACAGCTCAGCCAATTGGCTTGGA...TACCACCCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR TCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGCGCCGCCTCCATCTTTaGAATCCTCTTGAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGRRLHL*NPLEGG
Trigger: TCCGCCCTCAAGAGGATTTCAAAGATGGAGGCGGCG...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR TCA 90 bp TCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGGGCGGCGGCCTCAGCTaGGGCGGGCAACTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SWAWILDPGTEQPVVHVLGGGLS*GGQLRR
Trigger: CCTCCTTAGTTGCCCGCCTCAGCTGAGGCCGCCGCC...CAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp TCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTAGGCGGCGGCCTCAGCTaGGGCGGGCAACTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SSWAWILDPGTEQPVVHVGGGLS*GGQLRR
Trigger: CCTCCTTAGTTGCCCGCCTCAGCTGAGGCCGCCGCC...TACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCACGTTTTGCAGCATCTTaGCCGCAAGGAACCGGCGCT +
Preference number: 4 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSRFAAS*PQGTGA
Trigger: AGCGCCGGTTCCTTGCGGTCAAGATGCTGCAAAACG...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR TCA 90 bp TGGAGGAGCTGCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGACGGCAGGCACCTaGTGGGCACTGGTAACACTG +
Preference number: 4 (lower is better)
Translates to: WRSCSNSKERGSSRVQGLETAGT*WALVTL
Trigger: CAGTGTTACCAGTGCCCATCAGGTGCCTGCCGTCTC...AAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGCAGCTCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR TCA 90 bp CTTCCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACCTTTGCGTGGGGGCTTaGTGGGGCGACCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: LPPRPPHLPPPLPQRSSHLCVGA*WGDHSL
Trigger: GAGAGAGTGGTCGCCCCATCAAGCCCCCACGCAAAG...GTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGAGGAAGCGCTAAGGCGTaGCACTGCTACTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRGSAKA*HCYLLC
Trigger: GCACAGCAAGTAGCAGTGTCACGCCTTAGCGCTTCC...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR TCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGATCGGTAGACCCAGTTTaGCAGCATCCACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRSVDPV*QHPQAA
Trigger: GGCAGCCTGTGGATGCTGTCAAACTGGGTCTACCGA...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR TCA 90 bp CCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACTGCGAGGGCGGGGGAAAATaGGCGTCAGGAGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PPRPPHLPPPLPQRSSHCEGGGK*ASGEQS
Trigger: ACTCTGCTCTCCTGACGCTCATTTTCCCCCGCCCTC...GCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677085.1
CDS-3UTR GCA 90 bp TTCCTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTCGCGTGGGCGTAGCCTaGCTGAACCCGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: FLLGLDIGPWDRAASCSCRVGVA*LNPPGV
Trigger: CACCCCTGGCGGGTTCAGGCAGGCTACGCCCACGCG...ACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp CCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACTGCCACCAGGCAGAAGAGTaGCGCAGAGACCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: PPRPPHLPPPLPQRSSHCHQAEE*RRDPQG
Trigger: TCCCTGTGGGTCTCTGCGGCACTCTTCTGCCTGGTG...GCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGACTAGGGGGTCTGTACTaGCCGCTGGGACCAGTCATA +
Preference number: 4 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRLGGLY*PLGPVI
Trigger: TATGACTGGTCCCAGCGGGCAGTACAGACCCCCTAG...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGCTAGGGGGTCTGTACTaGCCGCTGGGACCAGTCATA +
Preference number: 4 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGLGGLY*PLGPVI
Trigger: TATGACTGGTCCCAGCGGGCAGTACAGACCCCCTAG...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp CTTCCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACCAGCTTGGCGCGCTCTaGAGACGGCGGACAGCAAGA +
Preference number: 4 (lower is better)
Translates to: LPPRPPHLPPPLPQRSSHQLGAL*RRRTAR
Trigger: TCTTGCTGTCCGCCGTCTGCAGAGCGCGCCAAGCTG...GTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGGAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp CATCAGAAGCTGCACAGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCAGCTTGGCGCGCTCTaGAGACGGCGGACAGCAAGA +
Preference number: 4 (lower is better)
Translates to: HQKLHRQEDSPFPANPRHQLGAL*RRRTAR
Trigger: TCTTGCTGTCCGCCGTCTGCAGAGCGCGCCAAGCTG...GTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCTGTGCAGCTTCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR GCA 90 bp AGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCACAAGAAGAGCCCTCAGCTTGGCGCGCTCTaGAGACGGCGGACAGCAAGA +
Preference number: 4 (lower is better)
Translates to: RQEDSPFPANPRHHKKSPQLGAL*RRRTAR
Trigger: TCTTGCTGTCCGCCGTCTGCAGAGCGCGCCAAGCTG...AGGGCTCTTCTTGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR GCA 90 bp AGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCACAAGAAGAGCCCTCTCTGCAAGGAACCGGCGCTaGCCTCAGCCGCGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: RKTHLSLPTPDTTRRALSARNRR*PQPRKV
Trigger: GACTTTCCGCGGCTGAGGGCAGCGCCGGTTCCTTGC...AGAGAGGGCTCTTCTTGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR GCA 90 bp TGGAGGAGCTGCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTAGGGGGAAGCCGTGCTaGCTTAGGCTCAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: WRSCSNSKERGSSRVQGLRGKPC*LRLKTP
Trigger: GGGAGTCTTGAGCCTAAGGCAGCACGGCTTCCCCCT...AAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGCAGCTCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp CCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACTGCAGGGGGAAGCCGTGCTaGCTTAGGCTCAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: PPRPPHLPPPLPQRSSHCRGKPC*LRLKTP
Trigger: GGGAGTCTTGAGCCTAAGGCAGCACGGCTTCCCCCT...GCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGTGGTACTCCCACCCTTGCCCTaGCCCATTTTGAATGGGGGC +
Preference number: 4 (lower is better)
Translates to: GGLAGEPGAKMAVGVGVVLPPLP*PILNGG
Trigger: GCCCCCATTCAAAATGGGGCAGGGCAAGGGTGGGAG...TACCACCCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCATCCAGATCAGGGCTTTaGACACTCCCACCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSSRSGL*TLPPLP
Trigger: GGGCAAGGGTGGGAGTGTGCAAAGCCCTGATCTGGA...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAATCCCCACGGAGCGGCTaGTCCATCGGTCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: AWILDPGTEQPVVHVLPESPRSG*SIGQRQ
Trigger: CTGGCGCTGACCGATGGACCAGCCGCTCCGTGGGGA...TTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
CDS-3UTR CCA 90 bp AAGCTGAGTCGAAGGGGAAGGAACACCTCTCCGCGGGAGCTTTTTCTATTGGCCACGCCTGGCGGGTGGTaGTTCTCGGCGGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KLSRRGRNTSPRELFLLATPGGW*FSAVRQ
Trigger: CTGCCTTACCGCCGAGAACCACCACCCGCCAGGCGT...GGCCAATAGAAAAAGCTCCCGCGGAGAGGTGTTCCTTCCCCTTCGACTCAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496118.2
CDS-3UTR CCA 90 bp AGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGAGAGGAAATGACTACGCCTGGCGGGTGGTaGTTCTCGGCGGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RSGGPAECKDLRSGEEMTTPGGW*FSAVRQ
Trigger: CTGCCTTACCGCCGAGAACCACCACCCGCCAGGCGT...AGTCATTTCCTCTCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCTGCCAACTTGGCCCCCTTCTTGTGGCTGTTCTTAGGGATGGTCACTACCAGCAAGACGCCTGGCGGGTaGTGGTTCTCGGCGGTAAGG +
Preference number: 4 (lower is better)
Translates to: AANLAPFLWLFLGMVTTSKTPGG*WFSAVR
Trigger: CCTTACCGCCGAGAACCACCACCCGCCAGGCGTCTT...GCTGGTAGTGACCATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTTGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CTTCCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACAAGACGCCTGGCGGGTaGTGGTTCTCGGCGGTAAGG +
Preference number: 4 (lower is better)
Translates to: LPPRPPHLPPPLPQRSSHKTPGG*WFSAVR
Trigger: CCTTACCGCCGAGAACCACCACCCGCCAGGCGTCTT...GTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAATGGCCGCAAGACGCCTaGCGGGTGGTGGTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: AWILDPGTEQPVVHVLPEWPQDA*RVVVLG
Trigger: GCCGAGAACCACCACCCGCCAGGCGTCTTGCGGCCA...TTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCAGTAGAGACTGGTAAAGGCCCTGGTTCTAGTGGTTCATCTGGCATCTTGGCAAACCCGCCAGGGGTGTaGCCGCAAGACGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: AVETGKGPGSSGSSGILANPPGV*PQDAWR
Trigger: CCGCCAGGCGTCTTGCGGCCACACCCCTGGCGGGTT...TGCCAAGATGCCAGATGAACCACTAGAACCAGGGCCTTTACCAGTCTCTACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp TCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGAACCCGCCAGGGGTGTaGCCGCAAGACGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SWAWILDPGTEQPVVHVLNPPGV*PQDAWR
Trigger: CCGCCAGGCGTCTTGCGGCCACACCCCTGGCGGGTT...CAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CTCTTGGGCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTAACCCGCCAGGGGTGTaGCCGCAAGACGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: LLGLDIGPWDRAASCSCTNPPGV*PQDAWR
Trigger: CCGCCAGGCGTCTTGCGGCCACACCCCTGGCGGGTT...AGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGCCCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGCATGCACAGCCCAACTaGAGACTGCCAAGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGHAQPN*RLPSSS
Trigger: GCTCGAGCTTGGCAGTCTCCAGTTGGGCTGTGCATG...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCACAATTGGCTGAGCTGTaGTCCGCCGACTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSQLAEL*SADSRE
Trigger: TTCCCTGGAGTCGGCGGACCACAGCTCAGCCAATTG...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGCATCTCCAAGCCAATTaGCTGAGCTGTGGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGHLQAN*LSCGPP
Trigger: CGGCGGACCACAGCTCAGCCAATTGGCTTGGAGATG...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCACATCTCCAAGCCAATTaGCTGAGCTGTGGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSHLQAN*LSCGPP
Trigger: CGGCGGACCACAGCTCAGCCAATTGGCTTGGAGATG...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGAAGACCCACAGGGAAGTaGCAACCCGCCACATCTCCA +
Preference number: 4 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRRPTGK*QPATSP
Trigger: TGGAGATGTGGCGGGTTGCCACTTCCCTGTGGGTCT...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCAGTAGAGACTGGTAAAGGCCCTGGTTCTAGTGGTTCATCTGGCATCTTGGCACACTCCAGCACGAAATaGCGCCGCCGAGCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: AVETGKGPGSSGSSGILAHSSTK*RRRAPR
Trigger: GCGCGGGGCTCGGCGGCGCCATTTCGTGCTGGAGTG...TGCCAAGATGCCAGATGAACCACTAGAACCAGGGCCTTTACCAGTCTCTACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGTGGTAGACAAACCCCCTGCCTaGCCGGCACGAAAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: GGLAGEPGAKMAVGVGVVDKPPA*PARKQS
Trigger: AGACTGCTTTCGTGCCGGCCAGGCAGGGGGTTTGTC...TACCACCCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp TGTAGGGCTTCCGGGGTTTCTTACGTAGGCAGGAAAGGACATAGCGCTCAAGCTCGCGGAAAGTCCGGGTaGCCTCGGTTCCCCTCACCG +
Preference number: 4 (lower is better)
Translates to: CRASGVSYVGRKGHSAQARGKSG*PRFPSP
Trigger: CGGTGAGGGGAACCGAGGCCACCCGGACTTTCCGCG...AGCTTGAGCGCTATGTCCTTTCCTGCCTACGTAAGAAACCCCGGAAGCCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp AGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCACAAGAAGAGCCCTCACCTCCGGGGGTGGTaGGTTGGCAGGGGTAAGTTG +
Preference number: 4 (lower is better)
Translates to: RQEDSPFPANPRHHKKSPHLRGW*VGRGKL
Trigger: CAACTTACCCCTGCCAACCCACCACCCCCGGAGGTG...AGGGCTCTTCTTGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR CCA 90 bp GACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGCTGTTCCTGTAGGACACCTCCGGGGGTaGTGGGTTGGCAGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: DPGTEQPVVHVLPEAVPVGHLRG*WVGRGK
Trigger: CTTACCCCTGCCAACCCACCACCCCCGGAGGTGTCC...TACAGGAACAGCTTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGACTCGTCCTGGCTTTTTaGGATTGGACACCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRLVLAF*DWTPPG
Trigger: CCCCGGAGGTGTCCAATCCCAAAAAGCCAGGACGAG...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGTGGTAGGAGCGCTGCCAACTTaGCCCCCTTCTTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GGLAGEPGAKMAVGVGVVGALPT*PPSCGC
Trigger: ACAGCCACAAGAAGGGGGCCAAGTTGGCAGCGCTCC...TACCACCCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACTGCCTGGTAACACTGCCCTaGAGCGCTGCCAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: PPRPPHLPPPLPQRSSHCLVTLP*SAANLA
Trigger: GGCCAAGTTGGCAGCGCTCCAGGGCAGTGTTACCAG...GCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000486864.5
ENST00000492172.5
ENST00000493063.5
ENST00000495733.5
ENST00000675333.1
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGGTGGTACTGGTAACACTGCCCTaGAGCGCTGCCAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: GGLAGEPGAKMAVGVGVVLVTLP*SAANLA
Trigger: GGCCAAGTTGGCAGCGCTCCAGGGCAGTGTTACCAG...TACCACCCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCTGCCAACTTGGCCCCCTTCTTGTGGCTGTTCTTAGGGATGGTCACTACCAGCCTTCTTAGGTTGAGGTaGGCGGGGTGCCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: AANLAPFLWLFLGMVTTSLLRLR*AGCPRP
Trigger: GGGCCTAGGGCACCCCGCCCACCTCAACCTAAGAAG...GCTGGTAGTGACCATCCCTAAGAACAGCCACAAGAAGGGGGCCAAGTTGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp AGAAGCTGCACAGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCACACTTCTTAGGTTGAGGTaGGCGGGGTGCCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: RSCTGRKTHLSLPTPDTTLLRLR*AGCPRP
Trigger: GGGCCTAGGGCACCCCGCCCACCTCAACCTAAGAAG...TGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCTGTGCAGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678778.1
CDS-3UTR CCA 90 bp CTCCCAGGAGGGCTAGCTGGAGAACCAGGAGCCAAGATGGCTGTAGGTGTAGGGTGTAGGCAGGGCAGGTaGGGCTGTCTTTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LPGGLAGEPGAKMAVGVGCRQGR*GCLCGL
Trigger: AAGGCCACAAAGACAGCCCCACCTGCCCTGCCTACA...CCCTACACCTACAGCCATCTTGGCTCCTGGTTCTCCAGCTAGCCCTCCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp GCTTGGATATTGGACCCTGGGACAGAGCAGCCAGTTGTTCATGTACTGCCCGAAGCAGGTGGGGCAGGGTaGTCTAGGGGTCCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: AWILDPGTEQPVVHVLPEAGGAG*SRGPVL
Trigger: CAGGACCGGACCCCTAGACCACCCTGCCCCACCTGC...TTCGGGCAGTACATGAACAACTGGCTGCTCTGTCCCAGGGTCCAATATCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR CCA 90 bp CTTCCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACCTTCTTCCCTCCCCATaGAGGCTGAGGGGACCACGG +
Preference number: 4 (lower is better)
Translates to: LPPRPPHLPPPLPQRSSHLLPSP*RLRGPR
Trigger: CCGTGGTCCCCTCAGCCTCCATGGGGAGGGAAGAAG...GTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
CDS-3UTR TCA 90 bp GCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGATCCAAGCCAATTGGCTaGGCTGTGGTCCGCCGACTC +
Preference number: 4 (lower is better)
Translates to: AVTARSGGPAECKDLRSGSKPIG*AVVRRL
Trigger: GAGTCGGCGGACCACAGCTCAGCCAATTGGCTTGGA...TCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR TCA 90 bp AGCTGCACAGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCACAAGATCCAAGCCAATTGGCTaGGCTGTGGTCCGCCGACTC +
Preference number: 4 (lower is better)
Translates to: SCTGRKTHLSLPTPDTTRSKPIG*AVVRRL
Trigger: GAGTCGGCGGACCACAGCTCAGCCAATTGGCTTGGA...TCTTGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCTGTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR TCA 90 bp CTTCCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACCCGGTAGACCCAGTTTaGCAGCATCCACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LPPRPPHLPPPLPQRSSHPVDPV*QHPQAA
Trigger: GGCAGCCTGTGGATGCTGTCAAACTGGGTCTACCGG...GTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR TCA 90 bp CATCAGAAGCTGCACAGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCCGGTAGACCCAGTTTaGCAGCATCCACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HQKLHRQEDSPFPANPRHPVDPV*QHPQAA
Trigger: GGCAGCCTGTGGATGCTGTCAAACTGGGTCTACCGG...GTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCTGTGCAGCTTCTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR TCA 90 bp CTCCTGTGCATCCCGGTAATCACGGTTCTCCATCTTCCGCTGCAGAAGGAGGCAGAGACGGCAGGCACCTaGTGGGCACTGGTAACACTG +
Preference number: 4 (lower is better)
Translates to: LLCIPVITVLHLPLQKEAETAGT*WALVTL
Trigger: CAGTGTTACCAGTGCCCATCAGGTGCCTGCCGTCTC...TGCCTCCTTCTGCAGCGGAAGATGGAGAACCGTGATTACCGGGATGCACAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR TCA 90 bp AGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCACAAGAAGAGCCCTCTCTCTTTGCGTGGGGGCTTaGTGGGGCGACCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: RKTHLSLPTPDTTRRALSLCVGA*WGDHSL
Trigger: GAGAGAGTGGTCGCCCCATCAAGCCCCCACGCAAAG...AGAGAGGGCTCTTCTTGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR TCA 90 bp CCTCCTCGTCCTCCTCATCTTCCTCCTCCTCTTCCTCAGAGGAGCTCTCACTGCTTGGACTTCTTAGGTTaGGGTGGGCGGGGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: PPRPPHLPPPLPQRSSHCLDFLG*GGRGAL
Trigger: TAGGGCACCCCGCCCACCTCAACCTAAGAAGTCCAA...GCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGACGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000678778.1
ENST00000679179.1
CDS-3UTR TCA 90 bp ACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGAGAGGAAGACCAAATGGGGAGATaGCTGAAACCCCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TARSGGPAECKDLRSGEEDQMGR*LKPPGP
Trigger: GGGCCCTGGGGGTTTCAGTCATCTCCCCATTTGGTC...TTCCTCTCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000477259.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
CDS-3UTR TCA 90 bp AAGCTGAGTCGAAGGGGAAGGAACACCTCTCCGCGGGAGCTTTTTCTATTGGCCATGGGTACGGAGGCATaGGGCTGGCCATTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: KLSRRGRNTSPRELFLLAMGTEA*GWPFPS
Trigger: GGAGGGGAATGGCCAGCCTCATGCCTCCGTACCCAT...GGCCAATAGAAAAAGCTCCCGCGGAGAGGTGTTCCTTCCCCTTCGACTCAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496118.2
CDS-3UTR GCA 90 bp ATCAGAAGCTGCACAGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCGGTGGTTGGAAGAGGTaGGGAAGCCATCGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: IRSCTGRKTHLSLPTPDTGGWKR*GSHRPR
Trigger: TCTGGGGCGATGGCTTCCGCACCTCTTCCAACCACC...GGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCTGTGCAGCTTCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR GCA 90 bp AGGCAGGAAGACTCACCTTTCCCTGCCAACCCCAGACACCACAAGAAGAGCCCTGGTGGTTGGAAGAGGTaGGGAAGCCATCGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: RQEDSPFPANPRHHKKSPGGWKR*GSHRPR
Trigger: TCTGGGGCGATGGCTTCCGCACCTCTTCCAACCACC...AGGGCTCTTCTTGTGGTGTCTGGGGTTGGCAGGGAAAGGTGAGTCTTCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000486864.5
ENST00000492172.5
ENST00000495733.5
ENST00000675333.1
ENST00000678778.1
CDS-3UTR GCA 90 bp GCAGTAACAGCAAGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGACACCAGGCAGAAGAGTaGCGCAGAGACCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: AVTARSGGPAECKDLRSGHQAEE*RRDPQG
Trigger: TCCCTGTGGGTCTCTGCGGCACTCTTCTGCCTGGTG...TCCACTTCTCAAGTCCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp GGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGAAGCCCGCTGTTGGTCTaGAGGGATTCCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GRPLSLRIGGSRAALGSRSPLLV*RDSLFL
Trigger: CAAGAAGAGGGAATCCCTGCAGACCAACAGCGGGCT...TCTTGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp ATGGGGCGACCACTCTCTCTACGCATAGGGGGAAGCCGTGCTGCCTTAGGCTCAAGCCCGCTGTTGGTCTaGAGGGATTCCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: MGRPLSLRIGGSRAALGSSPLLV*RDSLFL
Trigger: CAAGAAGAGGGAATCCCTGCAGACCAACAGCGGGCT...TGAGCCTAAGGCAGCACGGCTTCCCCCTATGCGTAGAGAGAGTGGTCGCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000477259.5
ENST00000477920.5
ENST00000479699.5
ENST00000482914.5
ENST00000493063.5
ENST00000675761.1
ENST00000677085.1
ENST00000679179.1
CDS-3UTR GCA 90 bp AGGAGCGGGGGTCCAGCAGAGTGCAAGGACTTGAGAAGTGGAGAGGAAATGACTAGGCGACAAACCCCCTaGCTGGCCGGCACGAAAGCA +
Preference number: 4 (lower is better)
Translates to: <