RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100425

Ensembl transcript IDs: ENST00000216267.12, ENST00000404034.5, ENST00000404760.5, ENST00000438393.5, ENST00000457780.3, ENST00000459821.1, ENST00000479985.1, ENST00000494833.1

Found 862 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTaGCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGG +
Preference number: 1 (lower is better)
Translates to: DASSTAWGRATDALG*PDVPTPLTAPRRRW
Trigger: CCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR CCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTaGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGA +
Preference number: 1 (lower is better)
Translates to: KVTPAARPGDVRQTH*AARTCPPHSQRPDG
Trigger: TCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR GCA 90 bp GCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTaGCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAA +
Preference number: 1 (lower is better)
Translates to: ARPGDVRQTHWAART*PPHSQRPDGDGFLE
Trigger: TTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR TCA 90 bp ATGGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCAATGTCACTaGGGTCGCTGGTCGGCTCCCCGTGGACGCGGCTCAGGTGGTTCA +
Preference number: 1 (lower is better)
Translates to: MDKTRAGGRAVSQCH*GRWSAPRGRGSGGS
Trigger: TGAACCACCTGAGCCGCGTCCACGGGGAGCCGACCAGCGACCTCAGTGACATTGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR CCA 90 bp CCGGGCCGTCAGTCAATGTCACTGAGGTCGCTGGTCGGCTCCCCGTaGACGCGGCTCAGGTGGTTCATGGCGCGGTCAAAAGCGATCCGC +
Preference number: 1 (lower is better)
Translates to: PGRQSMSLRSLVGSP*TRLRWFMARSKAIR
Trigger: GCGGATCGCTTTTGACCGCGCCATGAACCACCTGAGCCGCGTCCACGGGGAGCCGACCAGCGACCTCAGTGACATTGACTGACGGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR CCA 90 bp CCCACACCACCTTCAGAGGCTCCAGCACCGAGGCGGCGGCATCAGTaGAGATCCACATGCTGCTCTGGCCGACTTCGGCTGCGATCCTGG +
Preference number: 1 (lower is better)
Translates to: PTPPSEAPAPRRRHQ*RSTCCSGRLRLRSW
Trigger: CCAGGATCGCAGCCGAAGTCGGCCAGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCTCGGTGCTGGAGCCTCTGAAGGTGGTGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR CCA 90 bp ATGTCACTGAGGTCGCTGGTCGGCTCCCCGTGGACGCGGCTCAGGTaGTTCATGGCGCGGTCAAAAGCGATCCGCACGGCCTTCCGGATG +
Preference number: 1 (lower is better)
Translates to: MSLRSLVGSPWTRLR*FMARSKAIRTAFRM
Trigger: CATCCGGAAGGCCGTGCGGATCGCTTTTGACCGCGCCATGAACCACCTGAGCCGCGTCCACGGGGAGCCGACCAGCGACCTCAGTGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR GCA 90 bp CCGCCTTGGCGTAGTTCCCATTCTCGATGCAGGAGATCAGCTCACTaGGGTCCTCCAGCGTGTGCCGTCGCACAAGAGCCGGTTTGCCCC +
Preference number: 1 (lower is better)
Translates to: PPWRSSHSRCRRSAH*GPPACAVAQEPVCP
Trigger: GGGGCAAACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCGCAGTGAGCTGATCTCCTGCATCGAGAATGGGAACTACGCCAAGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR CCA 90 bp AAGAAAAAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTaGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACC +
Preference number: 1 (lower is better)
Translates to: KKKLHIKESDASSTA*GRATDALGCPDVPT
Trigger: GGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTTTTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR CCA 90 bp ATACAAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTaGCGGCCGGGCCGTCAGTCAATGTCACTGAGGTCGCTGGTCGGC +
Preference number: 1 (lower is better)
Translates to: IQTCTAYQHYGQDPR*RPGRQSMSLRSLVG
Trigger: GCCGACCAGCGACCTCAGTGACATTGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTTGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR CCA 90 bp TTAAGTTTTGAACAATATACAAACATGTACAGCTTATCAACACTATaGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCAATGTCACT +
Preference number: 1 (lower is better)
Translates to: LSFEQYTNMYSLSTL*TRPALAAGPSVNVT
Trigger: AGTGACATTGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTTGTATATTGTTCAAAACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR GCA 90 bp ATAAAATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATaGATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTGCCTGTATA +
Preference number: 1 (lower is better)
Translates to: IKSKYTQARVIYTMQ*ILLPSQVEFLCACI
Trigger: TATACAGGCACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR TCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGGTGGGGCCGGGATGGTaGCGCCGTTGTGGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: WAGRRERGHTHRRSRAAEVGPGW*RRCGGQ
Trigger: CTGGCCACCACAACGGCGTCACCATCCCGGCCCCAC...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR GCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGACAGACGCACTGGGCTaGCCGGACGTGCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMTDALG*PDVPTP
Trigger: TGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGT...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR GCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCACAAGAGCCGGTTTaGCCCGCCCACATTTGGGCG +
Preference number: 2 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRAQEPV*PAHIWA
Trigger: CGCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGC...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR TCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGACATATCAAAGAAAGTaGCGCCAGCAGCACGGCCTG +
Preference number: 2 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRTYQRK*RQQHGL
Trigger: CAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGT...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR GCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTACAGACGCACTGGGCTaGCCGGACGTGCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFTDALG*PDVPTP
Trigger: TGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGT...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR CCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCGCCAGCAGCACGGCCTaGGGACGTGCGACAGACGCA +
Preference number: 2 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAASSTA*GRATDA
Trigger: TGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGC...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR CCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCGTGCGACAGACGCACTaGGCTGCCCGGACGTGCCCA +
Preference number: 2 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIVRQTH*AARTCP
Trigger: TGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCAC...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR CCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGATCCTGGCCGCCTTaGCGTAGTTCCCATTCTCGA +
Preference number: 2 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRRSWPP*RSSHSR
Trigger: TCGAGAATGGGAACTACGCCAAGGCGGCCAGGATCG...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR GCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGAGTTCCCATTCTCGATaGAGGAGATCAGCTCACTGC +
Preference number: 2 (lower is better)
Translates to: RWAGRRERGHTHRRSRAASSHSR*RRSAHC
Trigger: GCAGTGAGCTGATCTCCTGCATCGAGAATGGGAACT...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR TCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGACATATCAAAGAAAGTaGCGCCAGCAGCACGGCCTG +
Preference number: 2 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRTYQRK*RQQHGL
Trigger: CAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGT...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR GCA 90 bp ACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCATGGGCTGCCCGGACGTaGCCACCCCACTCACAGCGC +
Preference number: 2 (lower is better)
Translates to: TAYQHYGQDPRWRPGRQSWAART*PPHSQR
Trigger: GCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCA...TGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR CCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCGCCCAGACGGAGATaGGTTCCTAGAAAACTTGGA +
Preference number: 2 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRAPRRR*VPRKLG
Trigger: TCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGC...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR CCA 90 bp ACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCACTGCGGGGTTTGAGGTaGGCGGGACGACGGGAGCGG +
Preference number: 2 (lower is better)
Translates to: TAYQHYGQDPRWRPGRQSLRGLR*AGRRER
Trigger: CCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAG...TGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR CCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTAGCCGCTGCACTTaGCCCACACCACCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFGSRCT*PTPPSE
Trigger: CTCTGAAGGTGGTGTGGGCCAAGTGCAGCGGCTACC...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR CCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGCGGCCTTCCGGATGCTaGAATTCCTCCCTTCCATCA +
Preference number: 2 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMRPSGC*NSSLPS
Trigger: TGATGGAAGGGAGGAATTCCAGCATCCGGAAGGCCG...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR CCA 90 bp GTCACTGAGGTCGCTGGTCGGCTCCCCGTGGACGCGGCTCAGGTGGTTCATGGCAGGCGGCGGCATCAGTaGAGATCCACATGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: VTEVAGRLPVDAAQVVHGRRRHQ*RSTCCS
Trigger: AGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCT...GCCATGAACCACCTGAGCCGCGTCCACGGGGAGCCGACCAGCGACCTCAGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR CCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAAATGGTGACGCCGTTGTaGTGGCCAGGCACACGGGGC +
Preference number: 2 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQMVTPL*WPGTRG
Trigger: GCCCCGTGTGCCTGGCCACCACAACGGCGTCACCAT...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR CCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCAGCTTATCAACACTATaGACAAGACCCGCGCTGGCG +
Preference number: 2 (lower is better)
Translates to: KVTPAARPGDVRQTHWAASLSTL*TRPALA
Trigger: CGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCT...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR CCA 90 bp CGGCTCAGGTGGTTCATGGCGCGGTCAAAAGCGATCCGCACGGCCTTCCGGATGATCCACATGCTGCTCTaGCCGACTTCGGCTGCGATC +
Preference number: 2 (lower is better)
Translates to: RLRWFMARSKAIRTAFRMIHMLL*PTSAAI
Trigger: GATCGCAGCCGAAGTCGGCCAGAGCAGCATGTGGAT...CATCCGGAAGGCCGTGCGGATCGCTTTTGACCGCGCCATGAACCACCTGAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR GCA 90 bp TACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCAGGAGATCAGCTCACTaGGGTCCTCCAGCGTGTGCC +
Preference number: 2 (lower is better)
Translates to: YSLSTLWTRPALAAGPSVRRSAH*GPPACA
Trigger: GGCACACGCTGGAGGACCGCAGTGAGCTGATCTCCT...GACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR GCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACACTGGCCGACTTCGGCTaGGATCCTGGCCGCCTTGGC +
Preference number: 2 (lower is better)
Translates to: KLHIKESDASSTAWGRATLADFG*DPGRLG
Trigger: GCCAAGGCGGCCAGGATCGCAGCCGAAGTCGGCCAG...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR CCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAGCTTATCAACACTATaGACAAGACCCGCGCTGGCG +
Preference number: 2 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRSLSTL*TRPALA
Trigger: CGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCT...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR CCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCGCGCCCAGACGGAGATaGGTTCCTAGAAAACTTGGA +
Preference number: 2 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIAPRRR*VPRKLG
Trigger: TCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGC...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR CCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTAGCTTATCAACACTATaGACAAGACCCGCGCTGGCG +
Preference number: 2 (lower is better)
Translates to: KKVTPAARPGDVRQTHWASLSTL*TRPALA
Trigger: CGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCT...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR CCA 90 bp CGGCTCAGGTGGTTCATGGCGCGGTCAAAAGCGATCCGCACGGCCTTCCGGATGGCGCCCAGACGGAGATaGGTTCCTAGAAAACTTGGA +
Preference number: 2 (lower is better)
Translates to: RLRWFMARSKAIRTAFRMAPRRR*VPRKLG
Trigger: TCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGC...CATCCGGAAGGCCGTGCGGATCGCTTTTGACCGCGCCATGAACCACCTGAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR CCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCGCTTCTCATCAGACTTaGTCTGCATGTGCTCCCCAA +
Preference number: 2 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIASHQT*SACAPQ
Trigger: TTGGGGAGCACATGCAGACCAAGTCTGATGAGAAGC...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR TCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGACATATCAAAGAAAGTaGCGCCAGCAGCACGGCCTG +
Preference number: 2 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWTYQRK*RQQHGL
Trigger: CAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGT...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR CCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAAAGCTTATCAACACTATaGACAAGACCCGCGCTGGCG +
Preference number: 2 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQSLSTL*TRPALA
Trigger: CGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCT...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR GCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCTGGGCTGCCCGGACGTaGCCACCCCACTCACAGCGC +
Preference number: 2 (lower is better)
Translates to: STHRPESFIQCNAFCSQAWAART*PPHSQR
Trigger: GCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCA...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR CCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCCTGCGGGGTTTGAGGTaGGCGGGACGACGGGAGCGG +
Preference number: 2 (lower is better)
Translates to: STHRPESFIQCNAFCSQALRGLR*AGRRER
Trigger: CCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAG...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR GCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCTGGGCTGCCCGGACGTaGCCACCCCACTCACAGCGC +
Preference number: 2 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSWAART*PPHSQR
Trigger: GCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCA...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR TCA 90 bp TACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCTTGGTGATCTGCAAGTaGTGTACACAGCATAACTTT +
Preference number: 2 (lower is better)
Translates to: YSLSTLWTRPALAAGPSVLVICK*CTQHNF
Trigger: AAAGTTATGCTGTGTACATCACTTGCAGATCACCAA...GACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR CCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCGCGCCCAGACGGAGATaGGTTCCTAGAAAACTTGGA +
Preference number: 2 (lower is better)
Translates to: STHRPESFIQCNAFCSQAAPRRR*VPRKLG
Trigger: TCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGC...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR CCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGCCAGCAGCACGGCCTaGGGACGTGCGACAGACGCA +
Preference number: 2 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYASSTA*GRATDA
Trigger: TGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGC...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR GCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTCGGTCCTCCAGCGTGTaGCGTCGCACAAGAGCCGGT +
Preference number: 2 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCRSSSV*RRTRAG
Trigger: ACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCG...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR TCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCGCGGAGTGTTTTTGGTaGTCTGCAAGTGATGTACAC +
Preference number: 2 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSAECFW*SASDVH
Trigger: GTGTACATCACTTGCAGATCACCAAAAACACTCCGC...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR CCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTAGCTTATCAACACTATaGACAAGACCCGCGCTGGCG +
Preference number: 2 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCSLSTL*TRPALA
Trigger: CGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCT...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR CCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTGCGCCCAGACGGAGATaGGTTCCTAGAAAACTTGGA +
Preference number: 2 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCAPRRR*VPRKLG
Trigger: TCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGC...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR GCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAATGCAATGCATTCTaGTCCCAAGCCAAGTTGAAT +
Preference number: 2 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSQCNAF*SQAKLN
Trigger: ATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTG...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR CCA 72 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTaGGCTGCCCGGACGTGCCCACCCCACTCACAGCGC +
Preference number: 3 (lower is better)
Translates to: PAARPGDVRQTH*AARTCPPHSQR
Trigger: GCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR TCA 72 bp ACCCGCGCTGGCGGCCGGGCCGTCAGTCAATGTCACTaGGGTCGCTGGTCGGCTCCCCGTGGACGCGGCTCA +
Preference number: 3 (lower is better)
Translates to: TRAGGRAVSQCH*GRWSAPRGRGS
Trigger: TGAGCCGCGTCCACGGGGAGCCGACCAGCGACCTCAGTGACATTGACTGACGGCCCGGCCGCCAGCGCGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR GCA 72 bp AGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTaGCCGGACGTGCCCACCCCACTCACAGCGCCCAGA +
Preference number: 3 (lower is better)
Translates to: STAWGRATDALG*PDVPTPLTAPR
Trigger: TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR-3UTR CAA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGACGCACAAGAGCCGGTTaGCCCCGCCCACATTTGGGC +
Preference number: 3 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRRTRAG*PRPHLG
Trigger: GCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGCG...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR CCA 72 bp AGGTCGCTGGTCGGCTCCCCGTGGACGCGGCTCAGGTaGTTCATGGCGCGGTCAAAAGCGATCCGCACGGCC +
Preference number: 3 (lower is better)
Translates to: RSLVGSPWTRLR*FMARSKAIRTA
Trigger: GGCCGTGCGGATCGCTTTTGACCGCGCCATGAACCACCTGAGCCGCGTCCACGGGGAGCCGACCAGCGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR CAA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGCCAAGGGGAACCATTTaGGACTTAGGAAGCCACTGC +
Preference number: 3 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAPRGTI*DLGSHC
Trigger: GCAGTGGCTTCCTAAGTCCAAAATGGTTCCCCTTGG...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR GCA 72 bp CCAGCACCGAGGCGGCGGCATCAGTGGAGATCCACATaGTGCTCTGGCCGACTTCGGCTGCGATCCTGGCCG +
Preference number: 3 (lower is better)
Translates to: PAPRRRHQWRST*CSGRLRLRSWP
Trigger: CGGCCAGGATCGCAGCCGAAGTCGGCCAGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCTCGGTGCTGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR CCA 72 bp TGGTCGGCTCCCCGTGGACGCGGCTCAGGTGGTTCATaGCGCGGTCAAAAGCGATCCGCACGGCCTTCCGGA +
Preference number: 3 (lower is better)
Translates to: WSAPRGRGSGGS*RGQKRSARPSG
Trigger: TCCGGAAGGCCGTGCGGATCGCTTTTGACCGCGCCATGAACCACCTGAGCCGCGTCCACGGGGAGCCGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR CCA 72 bp CCTTCAGAGGCTCCAGCACCGAGGCGGCGGCATCAGTaGAGATCCACATGCTGCTCTGGCCGACTTCGGCTG +
Preference number: 3 (lower is better)
Translates to: PSEAPAPRRRHQ*RSTCCSGRLRL
Trigger: CAGCCGAAGTCGGCCAGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCTCGGTGCTGGAGCCTCTGAAGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR CCA 72 bp CTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTaGGGACGTGCGACAGACGCACTGGGCTGCCCGGAC +
Preference number: 3 (lower is better)
Translates to: LHIKESDASSTA*GRATDALGCPD
Trigger: GTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR CCA 72 bp CAGTCAATGTCACTGAGGTCGCTGGTCGGCTCCCCGTaGACGCGGCTCAGGTGGTTCATGGCGCGGTCAAAA +
Preference number: 3 (lower is better)
Translates to: QSMSLRSLVGSP*TRLRWFMARSK
Trigger: TTTTGACCGCGCCATGAACCACCTGAGCCGCGTCCACGGGGAGCCGACCAGCGACCTCAGTGACATTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR GCA 72 bp CGTAGTTCCCATTCTCGATGCAGGAGATCAGCTCACTaGGGTCCTCCAGCGTGTGCCGTCGCACAAGAGCCG +
Preference number: 3 (lower is better)
Translates to: RSSHSRCRRSAH*GPPACAVAQEP
Trigger: CGGCTCTTGTGCGACGGCACACGCTGGAGGACCGCAGTGAGCTGATCTCCTGCATCGAGAATGGGAACTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR CCA 72 bp TGTACAGCTTATCAACACTATGGACAAGACCCGCGCTaGCGGCCGGGCCGTCAGTCAATGTCACTGAGGTCG +
Preference number: 3 (lower is better)
Translates to: CTAYQHYGQDPR*RPGRQSMSLRS
Trigger: CGACCTCAGTGACATTGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR CAA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGTGCTCCCAAGCCAAGTaGAATTTTTATGTGCCTGTA +
Preference number: 3 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWCSQAK*NFYVPV
Trigger: TACAGGCACATAAAAATTCAACTTGGCTTGGGAGCA...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR GCA 72 bp TGGCGCGGTCAAAAGCGATCCGCACGGCCTTCCGGATaGTGGAATTCCTCCCTTCCATCATCTTTAACTTGT +
Preference number: 3 (lower is better)
Translates to: WRGQKRSARPSG*WNSSLPSSLTC
Trigger: ACAAGTTAAAGATGATGGAAGGGAGGAATTCCAGCATCCGGAAGGCCGTGCGGATCGCTTTTGACCGCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR-3UTR CAA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGGGGATGGTGACGCCGTaGTGGTGGCCAGGCACACGG +
Preference number: 3 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKGMVTP*WWPGTR
Trigger: CCGTGTGCCTGGCCACCACAACGGCGTCACCATCCC...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR CCA 72 bp GAACAATATACAAACATGTACAGCTTATCAACACTATaGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTC +
Preference number: 3 (lower is better)
Translates to: EQYTNMYSLSTL*TRPALAAGPSV
Trigger: GACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTTGTATATTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
3UTR TCA 72 bp ACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTaGTCTGCAAGTGATGTACACAGCATAACTTTATTC +
Preference number: 3 (lower is better)
Translates to: THRRSRAAECFW*SASDVHSITLF
Trigger: GAATAAAGTTATGCTGTGTACATCACTTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR GCA 72 bp CACAGGCCAGAGTCATTTATACAATGCAATGCATTCTaGTCCCAAGCCAAGTTGAATTTTTATGTGCCTGTA +
Preference number: 3 (lower is better)
Translates to: HRPESFIQCNAF*SQAKLNFYVPV
Trigger: TACAGGCACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR GCA 72 bp AAGTACACACAGGCCAGAGTCATTTATACAATGCAATaGATTCTGCTCCCAAGCCAAGTTGAATTTTTATGT +
Preference number: 3 (lower is better)
Translates to: KYTQARVIYTMQ*ILLPSQVEFLC
Trigger: ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR GCA 72 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATaGAATGCATTCTGCTCCCAAGCCAAGTTGAATTTT +
Preference number: 3 (lower is better)
Translates to: NQSTHRPESFIQ*NAFCSQAKLNF
Trigger: AAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGGTGGGGCCGGGATGGTaGCGCCGTTGTGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRVGPGW*RRCGGQ
Trigger: CTGGCCACCACAACGGCGTCACCATCCCGGCCCCAC...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGGACTGCAGGCTGGACTaGAGCCGCCGCAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAEDCRLD*SRRSRG
Trigger: CCCCCTGCTGCGGCGGCTGCAGTCCAGCCTGCAGTC...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGCGCGCTCCAGGTCGTaGCGCAGCCGCTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGARSRS*RSRCQY
Trigger: GTACTGGCAGCGGCTGCGGCACGACCTGGAGCGCGC...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGGGCCGCTCAGGCAGGTaGATCCCCGAGGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRGRSGR*IPEASS
Trigger: GGAAGAGGCCTCGGGGATGCACCTGCCTGAGCGGCC...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGCTGGCCGACTTCGGCTaGGATCCTGGCCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRLADFG*DPGRLG
Trigger: GCCAAGGCGGCCAGGATCGCAGCCGAAGTCGGCCAG...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGCCACGATGCGCACCTTaGGCTCCGGGAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRPRCAP*APGGHW
Trigger: CCAGTGCCCTCCCGGAGCCCAAGGTGCGCATCGTGG...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGTCCTCCAGGCCCAGGTaGGCTCTGTTGGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRSSRPR*ALLAGS
Trigger: GGACCCCGCCAACAGAGCCCACCTGGGCCTGGAGGA...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGCAGCACGTCCAGGGGTaGGGCCGGGATGGTGACGCC +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAEQHVQG*GRDGDA
Trigger: GGCGTCACCATCCCGGCCCCACCCCTGGACGTGCTG...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGACAGCACGTCCAGGGGTaGGGCCGGGATGGTGACGCC +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGQHVQG*GRDGDA
Trigger: GGCGTCACCATCCCGGCCCCACCCCTGGACGTGCTG...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGGTGCGACAGACGCACTaGGCTGCCCGGACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRVRQTH*AARTCP
Trigger: TGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCAC...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGGCAGAGAGGCAGCCTaGGGAGCCCTCCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAGREAA*GALLST
Trigger: GGTGCTCAGGAGGGCTCCTCAGGCTGCCTCTCTGCC...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR GCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGCCTCTTCCAAGCCGATaGTGTCCACCTCGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRPLPSR*CPPRAG
Trigger: CCCGGCGCGAGGTGGACAGCATCGGCTTGGAAGAGG...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGGGCCGCTCAGGCAGGTaGATCCCCGAGGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAEGRSGR*IPEASS
Trigger: GGAAGAGGCCTCGGGGATGCACCTGCCTGAGCGGCC...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGGAAAGGCCGCCGCGGTaGCGCAGCAGGCCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRERPPR*RSRPLR
Trigger: CCTGAGCGGCCTGCTGCGGCACCGCGGCGGCCTTTC...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGCTGGTCGGCTCCCCGTaGACGCGGCTCAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAELVGSP*TRLRWF
Trigger: GAACCACCTGAGCCGCGTCCACGGGGAGCCGACCAG...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGTGCGACAGACGCACTaGGCTGCCCGGACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAVRQTH*AARTCP
Trigger: TGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCAC...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGCCACACATCCAGGCCTaGGCGAGTCCCCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAPHIQA*ASPQDQ
Trigger: CTGGTCCTGGGGACTCGCTCAGGCCTGGATGTGTGG...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR TCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGCAGCTGGTCCAGCACTaGGCGCAGCAGCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAEQLVQH*AQQHRQ
Trigger: CTGACGGTGCTGCTGCGCTCAGTGCTGGACCAGCTG...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGCAGCTGGTCCAGCACTaGGCGCAGCAGCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAQLVQH*AQQHRQ
Trigger: CTGACGGTGCTGCTGCGCTCAGTGCTGGACCAGCTG...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCGTGGGGCCGGGATGGTaGCGCCGTTGTGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCVGPGW*RRCGGQ
Trigger: CTGGCCACCACAACGGCGTCACCATCCCGGCCCCAC...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGTCAGAGGCCTCCGGGTaGAGCCTGGAGGCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAASEASG*SLEACG
Trigger: TCCACACGCCTCCAGGCTGCACCCGGAGGCCTCTGA...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCGCGCGCTCCAGGTCGTaGCGCAGCCGCTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCARSRS*RSRCQY
Trigger: GTACTGGCAGCGGCTGCGGCACGACCTGGAGCGCGC...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAACCTCGCGCCGGGCCTaGCTCAGAACAACACCTCCC +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGTSRRA*LRTTPP
Trigger: GGGAGGTGTTGTTCTGAGGCAGGCCCGGCGCGAGGT...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGCCTCTTCCAAGCCGATaGTGTCCACCTCGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAPLPSR*CPPRAG
Trigger: CCCGGCGCGAGGTGGACAGCATCGGCTTGGAAGAGG...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACGAAAGGCCGCCGCGGTaGCGCAGCAGGCCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHERPPR*RSRPLR
Trigger: CCTGAGCGGCCTGCTGCGGCACCGCGGCGGCCTTTC...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAGAAAGGCCGCCGCGGTaGCGCAGCAGGCCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRERPPR*RSRPLR
Trigger: CCTGAGCGGCCTGCTGCGGCACCGCGGCGGCCTTTC...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTTGGGCTGCCCGGACGTaGCCACCCCACTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRWAART*PPHSQR
Trigger: GCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCA...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGGTCCAGGCGCTTTCCTaGGGACTCCTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRVQALS*GLLLHL
Trigger: GAGGTGGAGGAGGAGTCCCCAGGAAAGCGCCTGGAC...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCAGCGTCGTCGGGGTGTaGCCTTCCTCCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCSVVGV*PSSPGR
Trigger: GCGGCCTGGGGAGGAAGGCCACACCCCGACGACGCT...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGATGGTGACGCCGTTGTaGTGGCCAGGCACACGGGGC +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAMVTPL*WPGTRG
Trigger: GCCCCGTGTGCCTGGCCACCACAACGGCGTCACCAT...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCGGACAAGACCCGCGCTaGCGGCCGGGCCGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCGQDPR*RPGRQS
Trigger: TGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCC...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGGGCGCGGGTGGGCTCTaGAGGGCGTCCGCTTACCAG +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRGAGGL*RASAYQ
Trigger: CTGGTAAGCGGACGCCCTCCAGAGCCCACCCGCGCC...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAAGAACAACACCTCCCTaGTCGCGCAGCCTCACCGCG +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGRTTPP*SRSLTA
Trigger: CGCGGTGAGGCTGCGCGATCAGGGAGGTGTTGTTCT...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACACACCTGCGGGGTTTaGGGTGGGCGGGACGACGGG +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRHTCGV*GGRDDG
Trigger: CCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTGTG...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGGACTTTCCCAGCATaGAGGCGGTCCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRRTFPA*RRSPRK
Trigger: CTTCCTGGGGGACCGCCTGCATGCTGGGAAAGTCCT...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR GCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGGCTGTACTCCACGATaGGCACCTTGGGCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAGCTPR*APWAPG
Trigger: TCCCGGAGCCCAAGGTGCGCATCGTGGAGTACAGCC...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGACTGCAGGCTGGACTaGAGCCGCCGCAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMDCRLD*SRRSRG
Trigger: CCCCCTGCTGCGGCGGCTGCAGTCCAGCCTGCAGTC...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGGCGCGCTCCAGGTCGTaGCGCAGCCGCTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTEARSRS*RSRCQY
Trigger: GTACTGGCAGCGGCTGCGGCACGACCTGGAGCGCGC...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGGGCCGCTCAGGCAGGTaGATCCCCGAGGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRGRSGR*IPEASS
Trigger: GGAAGAGGCCTCGGGGATGCACCTGCCTGAGCGGCC...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTCTGGCCGACTTCGGCTaGGATCCTGGCCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRLADFG*DPGRLG
Trigger: GCCAAGGCGGCCAGGATCGCAGCCGAAGTCGGCCAG...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGCTGCCCGGACGTaGCCACCCCACTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRWAART*PPHSQR
Trigger: GCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCA...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGATGGGCTGCCCGGACGTaGCCACCCCACTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRWAART*PPHSQR
Trigger: GCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCA...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGGGCAAAGCCGACCTCTaGGATCCACAGGGCACACAC +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRGKADL*DPQGTH
Trigger: GTGTGTGCCCTGTGGATCCCAGAGGTCGGCTTTGCC...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGCCTCCGGGTGCAGCCTaGAGGCGTGTGGACATCACA +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAEPPGAA*RRVDIT
Trigger: TGTGATGTCCACACGCCTCCAGGCTGCACCCGGAGG...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGGTCCAGGCGCTTTCCTaGGGACTCCTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAEVQALS*GLLLHL
Trigger: GAGGTGGAGGAGGAGTCCCCAGGAAAGCGCCTGGAC...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp ACGTCCAGGGGTGGGGCCGGGATGGTGACGCCGTTGTGGTGGCCAGGCACACGGAGCGTCGTCGGGGTGTaGCCTTCCTCCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: TSRGGAGMVTPLWWPGTRSVVGV*PSSPGR
Trigger: GCGGCCTGGGGAGGAAGGCCACACCCCGACGACGCT...CCGTGTGCCTGGCCACCACAACGGCGTCACCATCCCGGCCCCACCCCTGGACGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGAGCGGGCTGTTGCTaGAGGAGATGCTGGACTCGG +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRRAGCC*RRCWTR
Trigger: CCGAGTCCAGCATCTCCTCCAGCAACAGCCCGCTCT...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGAGGACAAGACCCGCGCTaGCGGCCGGGCCGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRGQDPR*RPGRQS
Trigger: TGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCC...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGGGACAAGACCCGCGCTaGCGGCCGGGCCGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTEGQDPR*RPGRQS
Trigger: TGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCC...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGGTGCGACAGACGCACTaGGCTGCCCGGACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRVRQTH*AARTCP
Trigger: TGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCAC...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCAGCAGCACGGCCTaGGGACGTGCGACAGACGCA +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRASSTA*GRATDA
Trigger: TGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGC...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACCTGCGGGGTTTGAGGTaGGCGGGACGACGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHLRGLR*AGRRER
Trigger: CCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAG...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGCACTACTGGCGCGGGTaGGCTCTGGAGGGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMHYWRG*ALEGVR
Trigger: GCGGACGCCCTCCAGAGCCCACCCGCGCCAGTAGTG...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGCAGAGAGGCAGCCTaGGGAGCCCTCCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMGREAA*GALLST
Trigger: GGTGCTCAGGAGGGCTCCTCAGGCTGCCTCTCTGCC...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR TCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGTCACCTGCTCACGCTTaGGCTTCTCCCGCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAASPAHA*ASPACA
Trigger: TGCGCAAGCGGGAGAAGCTCAAGCGTGAGCAGGTGA...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CTCACTGCGGTCCTCCAGCGTGTGCCGTCGCACAAGAGCCGGTTTGCCCCGCCCGTGGGGCCGGGATGGTaGCGCCGTTGTGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LTAVLQRVPSHKSRFAPPVGPGW*RRCGGQ
Trigger: CTGGCCACCACAACGGCGTCACCATCCCGGCCCCAC...GGGCGGGGCAAACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCGCAGTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR GCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGACTGCTGCTCGCCCTaGTTCTGGTTCTCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGDCCSP*FWFSQC
Trigger: GCACTGCGAGAACCAGAAGCAGGGCGAGCAGCAGTC...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGTCAGAGGCCTCCGGGTaGAGCCTGGAGGCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRSEASG*SLEACG
Trigger: TCCACACGCCTCCAGGCTGCACCCGGAGGCCTCTGA...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGCTCCATGGCGACCTaGTCCACCTTCACCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRSSMAT*STFTCS
Trigger: TGAGCAGGTGAAGGTGGAGCAGGTCGCCATGGAGCT...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGCGGGGTCCTTGTCTTaGAGCTGGTCCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGAGSLS*SWSSTE
Trigger: CTCAGTGCTGGACCAGCTGCAAGACAAGGACCCCGC...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTACCTCGCGCCGGGCCTaGCTCAGAACAACACCTCCC +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRTSRRA*LRTTPP
Trigger: GGGAGGTGTTGTTCTGAGGCAGGCCCGGCGCGAGGT...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGAAAGGCCGCCGCGGTaGCGCAGCAGGCCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFERPPR*RSRPLR
Trigger: CCTGAGCGGCCTGCTGCGGCACCGCGGCGGCCTTTC...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGTGTTGCTGGAGGAGATaGTGGACTCGGAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRCCWRR*WTRRHS
Trigger: GCTGTGCCTCCGAGTCCAGCATCTCCTCCAGCAACA...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGCGCAGAGCGGGCTGTTaGTGGAGGAGATGCTGGACT +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAARRAGC*WRRCWT
Trigger: AGTCCAGCATCTCCTCCAGCAACAGCCCGCTCTGCG...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGACGCAGAGCGGGCTGTTaGTGGAGGAGATGCTGGACT +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGRRAGC*WRRCWT
Trigger: AGTCCAGCATCTCCTCCAGCAACAGCCCGCTCTGCG...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCCTCCAGCGTGTaGCGTCGCACAAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRRSSSV*RRTRAG
Trigger: ACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCG...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGAACAGACGCACTGGGCTaGCCGGACGTGCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRTDALG*PDVPTP
Trigger: TGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGT...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAACACAGGAGGCCTCCTaGGGGCGGACGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRTQEAS*GRTEGC
Trigger: ACAGCCCTCCGTCCGCCCCCAGGAGGCCTCCTGTGT...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGAGGCACCACCCTTGTTaGGGCACAGCACACAGTCGG +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAARHHPC*GTAHSR
Trigger: CCGACTGTGTGCTGTGCCCCAACAAGGGTGGTGCCT...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGGCAAAGCCGACCTCTaGGATCCACAGGGCACACAC +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAGKADL*DPQGTH
Trigger: GTGTGTGCCCTGTGGATCCCAGAGGTCGGCTTTGCC...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGGGCAAAGCCGACCTCTaGGATCCACAGGGCACACAC +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAEGKADL*DPQGTH
Trigger: GTGTGTGCCCTGTGGATCCCAGAGGTCGGCTTTGCC...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGCAGTTTCCACCGGGCTaGAGGGATGTTCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAEQFPPG*RDVPHP
Trigger: GGGGTGAGGAACATCCCTCCAGCCCGGTGGAAACTG...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGACAGTTTCCACCGGGCTaGAGGGATGTTCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGQFPPG*RDVPHP
Trigger: GGGGTGAGGAACATCCCTCCAGCCCGGTGGAAACTG...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGGCTGAGACTGCAGGCTaGACTGCAGCCGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRAETAG*TAAAAA
Trigger: TGCTGCGGCGGCTGCAGTCCAGCCTGCAGTCTCAGC...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGATCAGCCGCAGCTCCATaGCGACCTGCTCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGSAAAP*RPAPPS
Trigger: TGAAGGTGGAGCAGGTCGCCATGGAGCTGCGGCTGA...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGATGCTGGAGGAGATGCTaGACTCGGAGGCACAGCGTC +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGCWRRC*TRRHSV
Trigger: GACGCTGTGCCTCCGAGTCCAGCATCTCCTCCAGCA...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGAGAGCGGGCTGTTGCTaGAGGAGATGCTGGACTCGG +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAERAGCC*RRCWTR
Trigger: CCGAGTCCAGCATCTCCTCCAGCAACAGCCCGCTCT...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGGCGGCGGCATCAGTaGAGATCCACATGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRRRRHQ*RSTCCS
Trigger: AGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCT...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGGTAGCCGCTGCACTTaGCCCACACCACCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAGSRCT*PTPPSE
Trigger: CTCTGAAGGTGGTGTGGGCCAAGTGCAGCGGCTACC...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCGTGACGCCGTTGTGGTaGCCAGGCACACGGGGCATC +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCVTPLW*PGTRGI
Trigger: GATGCCCCGTGTGCCTGGCCACCACAACGGCGTCAC...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGGTGACGCCGTTGTGGTaGCCAGGCACACGGGGCATC +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRVTPLW*PGTRGI
Trigger: GATGCCCCGTGTGCCTGGCCACCACAACGGCGTCAC...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGAGTGCGACAGACGCACTaGGCTGCCCGGACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRVRQTH*AARTCP
Trigger: TGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCAC...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAGTGCGACAGACGCACTaGGCTGCCCGGACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRVRQTH*AARTCP
Trigger: TGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCAC...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGCCACACATCCAGGCCTaGGCGAGTCCCCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTEPHIQA*ASPQDQ
Trigger: CTGGTCCTGGGGACTCGCTCAGGCCTGGATGTGTGG...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR TCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGTCCTGGACAGCCGCTTaGGCAGCCAGTAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRSWTAA*AASSCG
Trigger: CCCACAGCTACTGGCTGCTCAAGCGGCTGTCCAGGA...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGACAGCTGGTCCAGCACTaGGCGCAGCAGCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRQLVQH*AQQHRQ
Trigger: CTGACGGTGCTGCTGCGCTCAGTGCTGGACCAGCTG...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCAGAACAACACCTCCCTaGTCGCGCAGCCTCACCGCG +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCRTTPP*SRSLTA
Trigger: CGCGGTGAGGCTGCGCGATCAGGGAGGTGTTGTTCT...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACCCCCAAAGCCGTTGGTaGGACCTGCGTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHPQSRW*DLRPGA
Trigger: AGCGCCTGGACGCAGGTCTCACCAACGGCTTTGGGG...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGACCCCAAAGCCGTTGGTaGGACCTGCGTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRPQSRW*DLRPGA
Trigger: AGCGCCTGGACGCAGGTCTCACCAACGGCTTTGGGG...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGTGGGGCCGGGATGGTaGCGCCGTTGTGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFVGPGW*RRCGGQ
Trigger: CTGGCCACCACAACGGCGTCACCATCCCGGCCCCAC...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGCAGGCTTCCCTCTGTaGGTCCCGAAAGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGAGFPL*VPKGNP
Trigger: GGGATTTCCTTTCGGGACTCACAGAGGGAAGCCTGC...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404034.5
CDS-3UTR GCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGCCCAGAGCCCACAGTTaGAGGACTTTCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAEPRAHS*RTFPAC
Trigger: GCATGCTGGGAAAGTCCTGCAACTGTGGGCTCTGGG...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR GCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGACCACACCAACAGGCTaGGGAGACCACAGCAACGCT +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAATTPTG*GDHSNA
Trigger: AGCGTTGCTGTGGTCTCCGCAGCCTGTTGGTGTGGT...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR GCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGTCAGGAACTCAAACATaGTCTGCGACACGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRSGTQT*SATRRG
Trigger: TCCCCGCCGTGTCGCAGAGCATGTTTGAGTTCCTGA...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGTCGTCGATCAGAGACTaGTGCTCGCCCTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAASSIRD*CSPCFW
Trigger: CCAGAAGCAGGGCGAGCAGCAGTCTCTGATCGACGA...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTCGTCGATCAGAGACTaGTGCTCGCCCTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAESSIRD*CSPCFW
Trigger: CCAGAAGCAGGGCGAGCAGCAGTCTCTGATCGACGA...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTCCCCGTCCATGCAGATaGAGCACACGGCGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRPRPCR*STRRPR
Trigger: ACGAGGACGCCGTGTGCTGCATCTGCATGGACGGGG...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGTCAGAGGCCTCCGGGTaGAGCCTGGAGGCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMSEASG*SLEACG
Trigger: TCCACACGCCTCCAGGCTGCACCCGGAGGCCTCTGA...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTCGTGCCGCAGCCGCTaGCAGTACTTCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAESCRSR*QYFSFS
Trigger: AGAGAAGCTGAAGTACTGGCAGCGGCTGCGGCACGA...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGATTCAGACTCACGGGCTaGGCAAATATCCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGFRLTG*ANILAG
Trigger: CCCCGCCAGGATATTTGCGCAGCCCGTGAGTCTGAA...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGTTCAGACTCACGGGCTaGGCAAATATCCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAFRLTG*ANILAG
Trigger: CCCCGCCAGGATATTTGCGCAGCCCGTGAGTCTGAA...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGACCTCTTCCAAGCCGATaGTGTCCACCTCGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRPLPSR*CPPRAG
Trigger: CCCGGCGCGAGGTGGACAGCATCGGCTTGGAAGAGG...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGGCAGCTTTGCCCGCTTaGTCCGGGAGCCGCTGGACT +
Preference number: 4 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTEAALPA*SGSRWT
Trigger: AGTCCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGC...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGACGGAGTCTCCGCATGTaGTCCGCGACCTTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGRSLRM*SATFSL
Trigger: CAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCG...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGCGGAGTCTCCGCATGTaGTCCGCGACCTTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAERSLRM*SATFSL
Trigger: CAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCG...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCGCCGTTGGTGAGACCTaGGTCCAGGCGCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCAVGET*VQALSW
Trigger: CCAGGAAAGCGCCTGGACGCAGGTCTCACCAACGGC...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCGTTGGTGAGACCTaGGTCCAGGCGCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRAVGET*VQALSW
Trigger: CCAGGAAAGCGCCTGGACGCAGGTCTCACCAACGGC...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGCGGTCCTCCAGCGTGTaGCGTCGCACAAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTERSSSV*RRTRAG
Trigger: ACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCG...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGACAGTGGAGATCCACATaGTGCTCTGGCCGACTTCGG +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGQWRST*CSGRLR
Trigger: CCGAAGTCGGCCAGAGCAGCATGTGGATCTCCACTG...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGCACGGCCTTCCGGATaGTGGAATTCCTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGARPSG*WNSSLP
Trigger: TGGAAGGGAGGAATTCCAGCATCCGGAAGGCCGTGC...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCTGGGCTGCCCGGACGTaGCCACCCCACTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAWAART*PPHSQR
Trigger: GCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCA...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGCTGAGACTGCAGGCTaGACTGCAGCCGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMAETAG*TAAAAA
Trigger: TGCTGCGGCGGCTGCAGTCCAGCCTGCAGTCTCAGC...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCAGCGTCGTCGGGGTGTaGCCTTCCTCCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAASVVGV*PSSPGR
Trigger: GCGGCCTGGGGAGGAAGGCCACACCCCGACGACGCT...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGACGATCCTGGCCGCCTTaGCGTAGTTCCCATTCTCGA +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGRSWPP*RSSHSR
Trigger: TCGAGAATGGGAACTACGCCAAGGCGGCCAGGATCG...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTCTTCGGCTGCGATCCTaGCCGCCTTGGCGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRLRLRS*PPWRSS
Trigger: GGAACTACGCCAAGGCGGCCAGGATCGCAGCCGAAG...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAATGGTGACGCCGTTGTaGTGGCCAGGCACACGGGGC +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRMVTPL*WPGTRG
Trigger: GCCCCGTGTGCCTGGCCACCACAACGGCGTCACCAT...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGCGGCCTTCCGGATGCTaGAATTCCTCCCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRRPSGC*NSSLPS
Trigger: TGATGGAAGGGAGGAATTCCAGCATCCGGAAGGCCG...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGGCTCAGGTGGTTCATaGCGCGGTCAAAAGCGATCC +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAGSGGS*RGQKRS
Trigger: GGATCGCTTTTGACCGCGCCATGAACCACCTGAGCC...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGTGGACGCGGCTCAGGTaGTTCATGGCGCGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAWTRLR*FMARSK
Trigger: TTTTGACCGCGCCATGAACCACCTGAGCCGCGTCCA...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGGACGCGGCTCAGGTaGTTCATGGCGCGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAEWTRLR*FMARSK
Trigger: TTTTGACCGCGCCATGAACCACCTGAGCCGCGTCCA...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCTGCGGGGTTTGAGGTaGGCGGGACGACGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAALRGLR*AGRRER
Trigger: CCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAG...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGCATCGATGGGCTCGATaGACACCGTGTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAHRWAR*TPCWQS
Trigger: GCTTTGCCAACACGGTGTTCATCGAGCCCATCGATG...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATCCTGGACAGCCGCTTaGGCAGCCAGTAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRSWTAA*AASSCG
Trigger: CCCACAGCTACTGGCTGCTCAAGCGGCTGTCCAGGA...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCTGCTGTGAGCTTCGCTaGGACTGCAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCCCELR*DCRLDC
Trigger: GCAGTCCAGCCTGCAGTCTCAGCGAAGCTCACAGCA...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCGTCAGTCAATGTCACTaGGGTCGCTGGTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCVSQCH*GRWSAP
Trigger: GGGAGCCGACCAGCGACCTCAGTGACATTGACTGAC...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCCACACCTGCGGGGTTTaGGGTGGGCGGGACGACGGG +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIHTCGV*GGRDDG
Trigger: CCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTGTG...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCAGGACTTTCCCAGCATaGAGGCGGTCCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCRTFPA*RRSPRK
Trigger: CTTCCTGGGGGACCGCCTGCATGCTGGGAAAGTCCT...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGAGGCTGTACTCCACGATaGGCACCTTGGGCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRGCTPR*APWAPG
Trigger: TCCCGGAGCCCAAGGTGCGCATCGTGGAGTACAGCC...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTTCTGGTTCTCGCAGTaGGACTCCTTCTCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: WAGRRERGHTHRRSRAAEFWFSQ*DSFSKR
Trigger: CCGCTTCGAGAAGGAGTCGCACTGCGAGAACCAGAA...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGACTGCTGCTCGCCCTaGTTCTGGTTCTCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRDCCSP*FWFSQC
Trigger: GCACTGCGAGAACCAGAAGCAGGGCGAGCAGCAGTC...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGATCGATCAGAGACTGCTaGTCGCCCTGCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGSIRDC*SPCFWF
Trigger: GAACCAGAAGCAGGGCGAGCAGCAGTCTCTGATCGA...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGCCCCGTCCATGCAGATaGAGCACACGGCGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMPRPCR*STRRPR
Trigger: ACGAGGACGCCGTGTGCTGCATCTGCATGGACGGGG...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CTCACTGCGGTCCTCCAGCGTGTGCCGTCGCACAAGAGCCGGTTTGCCCCGCCCTCAGAGGCCTCCGGGTaGAGCCTGGAGGCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LTAVLQRVPSHKSRFAPPSEASG*SLEACG
Trigger: TCCACACGCCTCCAGGCTGCACCCGGAGGCCTCTGA...GGGCGGGGCAAACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCGCAGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR GCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCGACTGCAGGCTGGACTaGAGCCGCCGCAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIDCRLD*SRRSRG
Trigger: CCCCCTGCTGCGGCGGCTGCAGTCCAGCCTGCAGTC...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGGCGGGGTCCTTGTCTTaGAGCTGGTCCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRAGSLS*SWSSTE
Trigger: CTCAGTGCTGGACCAGCTGCAAGACAAGGACCCCGC...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACGCCGTTGGTGAGACCTaGGTCCAGGCGCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHAVGET*VQALSW
Trigger: CCAGGAAAGCGCCTGGACGCAGGTCTCACCAACGGC...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGCACAAGAGCCGGTTTaGCCCGCCCACATTTGGGCG +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMAQEPV*PAHIWA
Trigger: CGCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGC...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGAGGAGATCAGCTCACTaGGGTCCTCCAGCGTGTGCC +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRRRSAH*GPPACA
Trigger: GGCACACGCTGGAGGACCGCAGTGAGCTGATCTCCT...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACGGGGTCGATGATCAGTaGCGGGTAGGAGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHGVDDQ*RVGGVA
Trigger: GGCTACCCCTCCTACCCGGCACTGATCATCGACCCC...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGGGCTGCCCGGACGTaGCCACCCCACTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIWAART*PPHSQR
Trigger: GCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCA...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGACAGGCATGCTCAGTaGCTACCTGGTCCTATCGGA +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGDRHAQ*LPGPIG
Trigger: TCCGATAGGACCAGGTAGCCACTGAGCATGCCTGTC...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR CCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCGTCCACATACAGGGCTaGACCCCACCAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCVHIQG*TPPGTE
Trigger: CTCTGTGCCTGGTGGGGTCCAGCCCTGTATGTGGAC...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCCACGATGCGCACCTTaGGCTCCGGGAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAPRCAP*APGGHW
Trigger: CCAGTGCCCTCCCGGAGCCCAAGGTGCGCATCGTGG...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGTCAGCCGCAGCTCCATaGCGACCTGCTCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRSAAAP*RPAPPS
Trigger: TGAAGGTGGAGCAGGTCGCCATGGAGCTGCGGCTGA...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGACCAGGTGGGCTCTGTTaGCGGGGTCCAGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRPGGLC*RGPATC
Trigger: ACAGGTTGCTGGACCCCGCCAACAGAGCCCACCTGG...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGCCAGGTGGGCTCTGTTaGCGGGGTCCAGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMPGGLC*RGPATC
Trigger: ACAGGTTGCTGGACCCCGCCAACAGAGCCCACCTGG...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGGGTAGCCGCTGCACTTaGCCCACACCACCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRGSRCT*PTPPSE
Trigger: CTCTGAAGGTGGTGTGGGCCAAGTGCAGCGGCTACC...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGACAGCACGTCCAGGGGTaGGGCCGGGATGGTGACGCC +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRQHVQG*GRDGDA
Trigger: GGCGTCACCATCCCGGCCCCACCCCTGGACGTGCTG...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGGCGCCCAGACGGAGATaGGTTCCTAGAAAACTTGGA +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRAPRRR*VPRKLG
Trigger: TCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGC...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCCTGCGGGGTTTGAGGTaGGCGGGACGACGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVILRGLR*AGRRER
Trigger: CCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAG...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGTGCTGTGAGCTTCGCTaGGACTGCAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTECCELR*DCRLDC
Trigger: GCAGTCCAGCCTGCAGTCTCAGCGAAGCTCACAGCA...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGATTTTCTCTCTGCTGTaGGCTTCGCTGAGACTGCAG +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRIFSLL*ASLRLQ
Trigger: CTGCAGTCTCAGCGAAGCTCACAGCAGAGAGAAAAT...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGATCACCTGCTCACGCTTaGGCTTCTCCCGCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRSPAHA*ASPACA
Trigger: TGCGCAAGCGGGAGAAGCTCAAGCGTGAGCAGGTGA...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGTCACCTGCTCACGCTTaGGCTTCTCCCGCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTESPAHA*ASPACA
Trigger: TGCGCAAGCGGGAGAAGCTCAAGCGTGAGCAGGTGA...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGACATATCAAAGAAAGTaGCGCCAGCAGCACGGCCTG +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAATYQRK*RQQHGL
Trigger: CAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGT...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTCACACCTGCGGGGTTTaGGGTGGGCGGGACGACGGG +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWAHTCGV*GGRDDG
Trigger: CCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTGTG...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CAGCACCGAGGCGGCGGCATCAGTGGAGATCCACATGCTGCTCTGGCCGACTTCCACACCTGCGGGGTTTaGGGTGGGCGGGACGACGGG +
Preference number: 4 (lower is better)
Translates to: QHRGGGISGDPHAALADFHTCGV*GGRDDG
Trigger: CCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTGTG...GAAGTCGGCCAGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCTCGGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR GCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCAGGCACAGAGGCTATaGCCACCAGACAGGCATGCT +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRQAQRL*PPDRHA
Trigger: AGCATGCCTGTCTGGTGGGCATAGCCTCTGTGCCTG...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGACTGCTGCTCGCCCTaGTTCTGGTTCTCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMDCCSP*FWFSQC
Trigger: GCACTGCGAGAACCAGAAGCAGGGCGAGCAGCAGTC...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCTTTGTGGCACTGGATaGAGGCACCCACGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRLCGTG*RHPRPS
Trigger: AGAAGGGCGTGGGTGCCTGCATCCAGTGCCACAAAG...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTTCGTGCCGCAGCCGCTaGCAGTACTTCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRSCRSR*QYFSFS
Trigger: AGAGAAGCTGAAGTACTGGCAGCGGCTGCGGCACGA...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CAGCACCGAGGCGGCGGCATCAGTGGAGATCCACATGCTGCTCTGGCCGACTTCGCGCGCTCCAGGTCGTaGCGCAGCCGCTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: QHRGGGISGDPHAALADFARSRS*RSRCQY
Trigger: GTACTGGCAGCGGCTGCGGCACGACCTGGAGCGCGC...GAAGTCGGCCAGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCTCGGTGCTG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR GCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTAGCTCCATGGCGACCTaGTCCACCTTCACCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRSSMAT*STFTCS
Trigger: TGAGCAGGTGAAGGTGGAGCAGGTCGCCATGGAGCT...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTTTCAGACTCACGGGCTaGGCAAATATCCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRFRLTG*ANILAG
Trigger: CCCCGCCAGGATATTTGCGCAGCCCGTGAGTCTGAA...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCCTCTTCCAAGCCGATaGTGTCCACCTCGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAPLPSR*CPPRAG
Trigger: CCCGGCGCGAGGTGGACAGCATCGGCTTGGAAGAGG...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAGGCCGCTCAGGCAGGTaGATCCCCGAGGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRGRSGR*IPEASS
Trigger: GGAAGAGGCCTCGGGGATGCACCTGCCTGAGCGGCC...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGCAGCTTTGCCCGCTTaGTCCGGGAGCCGCTGGACT +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFAALPA*SGSRWT
Trigger: AGTCCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGC...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGAGGGGCTGGCTGTGCTaGTGGCTCAGCTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMRGWLC*WLSLFR
Trigger: CCGAAACAAGCTGAGCCAGCAGCACAGCCAGCCCCT...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGCAGGGGCTGGCTGTaGTGCTGGCTCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMGRGWL*CWLSLF
Trigger: AAACAAGCTGAGCCAGCAGCACAGCCAGCCCCTGCC...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGCGCAGAGCGGGCTGTTaGTGGAGGAGATGCTGGACT +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMRRAGC*WRRCWT
Trigger: AGTCCAGCATCTCCTCCAGCAACAGCCCGCTCTGCG...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTTCCCATTCTCGATaGAGGAGATCAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRSSHSR*RRSAHC
Trigger: GCAGTGAGCTGATCTCCTGCATCGAGAATGGGAACT...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCTGGAGATCCACATGCTaGTCTGGCCGACTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCWRSTC*SGRLRL
Trigger: CAGCCGAAGTCGGCCAGAGCAGCATGTGGATCTCCA...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCAGTGGAGATCCACATaGTGCTCTGGCCGACTTCGG +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCQWRST*CSGRLR
Trigger: CCGAAGTCGGCCAGAGCAGCATGTGGATCTCCACTG...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CTCACTGCGGTCCTCCAGCGTGTGCCGTCGCACAAGAGCCGGTTTGCCCCGCCCGGGGTCGATGATCAGTaGCGGGTAGGAGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: LTAVLQRVPSHKSRFAPPGVDDQ*RVGGVA
Trigger: GGCTACCCCTCCTACCCGGCACTGATCATCGACCCC...GGGCGGGGCAAACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCGCAGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR GCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGACTTGGTCTGCATGTaGTCCCCAATCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGDLVCM*SPIFST
Trigger: CGTGCTGAAGATTGGGGAGCACATGCAGACCAAGTC...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAACAGACGCACTGGGCTaGCCGGACGTGCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRTDALG*PDVPTP
Trigger: TGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGT...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCACAGACGCACTGGGCTaGCCGGACGTGCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVITDALG*PDVPTP
Trigger: TGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGT...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGCCAGTGCGCTCTGAGTaGAAGCGCTATGTGATTCAT +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRPVRSE*KRYVIH
Trigger: ATGAATCACATAGCGCTTGCACTCAGAGCGCACTGG...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGAGCGTCCGCTTACCAGTaGGCTCTGAGTGCAAGCGCT +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRASAYQ*ALSASA
Trigger: AGCGCTTGCACTCAGAGCGCACTGGTAAGCGGACGC...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAGTCCACATACAGGGCTaGACCCCACCAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRVHIQG*TPPGTE
Trigger: CTCTGTGCCTGGTGGGGTCCAGCCCTGTATGTGGAC...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCGCGTGCCGTGGGCGCTaGGGAGGGCCTCGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAACRGR*GGPRFS
Trigger: AGAAAAACGAGGCCCTCCCCAGCGCCCACGGCACGC...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGACCACGATGCGCACCTTaGGCTCCGGGAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRPRCAP*APGGHW
Trigger: CCAGTGCCCTCCCGGAGCCCAAGGTGCGCATCGTGG...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGAAGGCACCACCCTTGTTaGGGCACAGCACACAGTCGG +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRRHHPC*GTAHSR
Trigger: CCGACTGTGTGCTGTGCCCCAACAAGGGTGGTGCCT...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGAGGCACCACCCTTGTTaGGGCACAGCACACAGTCGG +
Preference number: 4 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTERHHPC*GTAHSR
Trigger: CCGACTGTGTGCTGTGCCCCAACAAGGGTGGTGCCT...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACCAGTTTCCACCGGGCTaGAGGGATGTTCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHQFPPG*RDVPHP
Trigger: GGGGTGAGGAACATCCCTCCAGCCCGGTGGAAACTG...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGTTTGCTTTGTGGCACTaGATGCAGGCACCCACGCCC +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRFALWH*MQAPTP
Trigger: GGGCGTGGGTGCCTGCATCCAGTGCCACAAAGCAAA...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCTTTGCTTTGTGGCACTaGATGCAGGCACCCACGCCC +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCFALWH*MQAPTP
Trigger: GGGCGTGGGTGCCTGCATCCAGTGCCACAAAGCAAA...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTTCCTTGTCTTGCAGCTaGTCCAGCACTGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRSLSCS*SSTERS
Trigger: GCTGCGCTCAGTGCTGGACCAGCTGCAAGACAAGGA...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACTGCTGGAGGAGATGCTaGACTCGGAGGCACAGCGTC +
Preference number: 4 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHCWRRC*TRRHSV
Trigger: GACGCTGTGCCTCCGAGTCCAGCATCTCCTCCAGCA...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAAGAGCGGGCTGTTGCTaGAGGAGATGCTGGACTCGG +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRRAGCC*RRCWTR
Trigger: CCGAGTCCAGCATCTCCTCCAGCAACAGCCCGCTCT...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGATCCACATGCTGCTCTaGCCGACTTCGGCTGCGATC +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRIHMLL*PTSAAI
Trigger: GATCGCAGCCGAAGTCGGCCAGAGCAGCATGTGGAT...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCATCCACATGCTGCTCTaGCCGACTTCGGCTGCGATC +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCIHMLL*PTSAAI
Trigger: GATCGCAGCCGAAGTCGGCCAGAGCAGCATGTGGAT...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGAGGTAGCCGCTGCACTTaGCCCACACCACCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRGSRCT*PTPPSE
Trigger: CTCTGAAGGTGGTGTGGGCCAAGTGCAGCGGCTACC...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCGTGACGCCGTTGTGGTaGCCAGGCACACGGGGCATC +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAVTPLW*PGTRGI
Trigger: GATGCCCCGTGTGCCTGGCCACCACAACGGCGTCAC...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCATGGTGACGCCGTTGTaGTGGCCAGGCACACGGGGC +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAMVTPL*WPGTRG
Trigger: GCCCCGTGTGCCTGGCCACCACAACGGCGTCACCAT...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTCAGCACGTCCAGGGGTaGGGCCGGGATGGTGACGCC +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWAQHVQG*GRDGDA
Trigger: GGCGTCACCATCCCGGCCCCACCCCTGGACGTGCTG...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGGGCTCAGGTGGTTCATaGCGCGGTCAAAAGCGATCC +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRGSGGS*RGQKRS
Trigger: GGATCGCTTTTGACCGCGCCATGAACCACCTGAGCC...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTTGGACGCGGCTCAGGTaGTTCATGGCGCGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRWTRLR*FMARSK
Trigger: TTTTGACCGCGCCATGAACCACCTGAGCCGCGTCCA...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGTGGACGCGGCTCAGGTaGTTCATGGCGCGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRWTRLR*FMARSK
Trigger: TTTTGACCGCGCCATGAACCACCTGAGCCGCGTCCA...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGACTGGTCGGCTCCCCGTaGACGCGGCTCAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRLVGSP*TRLRWF
Trigger: GAACCACCTGAGCCGCGTCCACGGGGAGCCGACCAG...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGCGCCCAGACGGAGATaGGTTCCTAGAAAACTTGGA +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGAPRRR*VPRKLG
Trigger: TCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGC...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTCACTACTGGCGCGGGTaGGCTCTGGAGGGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWAHYWRG*ALEGVR
Trigger: GCGGACGCCCTCCAGAGCCCACCCGCGCCAGTAGTG...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGATCACGTTGCTGTTCTaGCACTCCCCGTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRITLLF*HSPSMQ
Trigger: CTGCATGGACGGGGAGTGTCAGAACAGCAACGTGAT...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCATCGATGGGCTCGATaGACACCGTGTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCHRWAR*TPCWQS
Trigger: GCTTTGCCAACACGGTGTTCATCGAGCCCATCGATG...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTAGTAAGCGGTCTTTCTaGCGGAGAAGGTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRSKRSF*RRRWCH
Trigger: GTGGCACCACCTTCTCCGTCAGAAAGACCGCTTACT...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAACACACCTGCGGGGTTTaGGGTGGGCGGGACGACGGG +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQHTCGV*GGRDDG
Trigger: CCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTGTG...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAACCACACCAACAGGCTaGGGAGACCACAGCAACGCT +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRTTPTG*GDHSNA
Trigger: AGCGTTGCTGTGGTCTCCGCAGCCTGTTGGTGTGGT...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR GCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACATGGGGAAGAAGGATaGCTCGCTGCAGAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRHGEEG*LAAEPR
Trigger: TCGAGGCTCTGCAGCGAGGCATCCTTCTTCCCCATG...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGACTTTGTGGCACTGGATaGAGGCACCCACGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRLCGTG*RHPRPS
Trigger: AGAAGGGCGTGGGTGCCTGCATCCAGTGCCACAAAG...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGTGCTCCACCTTCACCTaGTCACGCTTGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRCSTFT*SRLSFS
Trigger: GGAGAAGCTCAAGCGTGAGCAGGTGAAGGTGGAGCA...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCTCCATGGCGACCTaGTCCACCTTCACCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHSSMAT*STFTCS
Trigger: TGAGCAGGTGAAGGTGGAGCAGGTCGCCATGGAGCT...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACCTTTTTGAGCAGCTTTaGCCGCTTGCTCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHLFEQL*PLAPGA
Trigger: GGCTCCCGGAGCAAGCGGGCAAAGCTGCTCAAAAAG...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGTGTTGCTGGAGGAGATaGTGGACTCGGAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMCCWRR*WTRRHS
Trigger: GCTGTGCCTCCGAGTCCAGCATCTCCTCCAGCAACA...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAAGTTCCCATTCTCGATaGAGGAGATCAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGSSHSR*RRSAHC
Trigger: GCAGTGAGCTGATCTCCTGCATCGAGAATGGGAACT...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGCAGTGGAGATCCACATaGTGCTCTGGCCGACTTCGG +
Preference number: 4 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTEQWRST*CSGRLR
Trigger: CCGAAGTCGGCCAGAGCAGCATGTGGATCTCCACTG...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGTCATCAGACTTGGTCTaGATGTGCTCCCCAATCTTC +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRSSDLV*MCSPIF
Trigger: GAAGATTGGGGAGCACATGCAGACCAAGTCTGATGA...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGCCACAAAAGCATGCTTaGACAGATCTAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRPQKHA*TDLAQQ
Trigger: CTGCTGAGCTAGATCTGTCCAAGCATGCTTTTGTGG...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR CCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGGCTGCGCAAATATCCTaGCGGGGTCCTTGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRAAQIS*RGPCLA
Trigger: TGCAAGACAAGGACCCCGCCAGGATATTTGCGCAGC...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCCAGGTGGGCTCTGTTaGCGGGGTCCAGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAPGGLC*RGPATC
Trigger: ACAGGTTGCTGGACCCCGCCAACAGAGCCCACCTGG...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CAGAGGCTCCAGCACCGAGGCGGCGGCATCAGTGGAGATCCACATGCTGCTCTGTCCTCCAGGCCCAGGTaGGCTCTGTTGGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QRLQHRGGGISGDPHAALSSRPR*ALLAGS
Trigger: GGACCCCGCCAACAGAGCCCACCTGGGCCTGGAGGA...CAGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCTCGGTGCTGGAGCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGTCCAGGCGCTTTCCTaGGGACTCCTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFVQALS*GLLLHL
Trigger: GAGGTGGAGGAGGAGTCCCCAGGAAAGCGCCTGGAC...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGATCCACATGCTGCTCTaGCCGACTTCGGCTGCGATC +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMIHMLL*PTSAAI
Trigger: GATCGCAGCCGAAGTCGGCCAGAGCAGCATGTGGAT...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGGCGGCGGCATCAGTaGAGATCCACATGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHRRRHQ*RSTCCS
Trigger: AGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCT...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAGGCTCAGGTGGTTCATaGCGCGGTCAAAAGCGATCC +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRGSGGS*RGQKRS
Trigger: GGATCGCTTTTGACCGCGCCATGAACCACCTGAGCC...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTCTGGTCGGCTCCCCGTaGACGCGGCTCAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWALVGSP*TRLRWF
Trigger: GAACCACCTGAGCCGCGTCCACGGGGAGCCGACCAG...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCAGCAGCACGGCCTaGGGACGTGCGACAGACGCA +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWAASSTA*GRATDA
Trigger: TGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGC...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAACTGCGGGGTTTGAGGTaGGCGGGACGACGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQLRGLR*AGRRER
Trigger: CCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAG...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTCGGCCGACTTCTCGATaGACTTGTAGTACACAGGAG +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRRPTSR*TCSTQE
Trigger: CTCCTGTGTACTACAAGTTCATCGAGAAGTCGGCCG...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACCTTGCGCTTCTCATTaGCGATCTCCAGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRPCASH*RSPARH
Trigger: ATGCCTGGCTGGAGATCGTCAATGAGAAGCGCAAGG...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGATCACGTTGCTGTTCTaGCACTCCCCGTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMITLLF*HSPSMQ
Trigger: CTGCATGGACGGGGAGTGTCAGAACAGCAACGTGAT...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACATCGATGGGCTCGATaGACACCGTGTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRHRWAR*TPCWQS
Trigger: GCTTTGCCAACACGGTGTTCATCGAGCCCATCGATG...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAAGTAAGCGGTCTTTCTaGCGGAGAAGGTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRSKRSF*RRRWCH
Trigger: GTGGCACCACCTTCTCCGTCAGAAAGACCGCTTACT...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTCCTGGACAGCCGCTTaGGCAGCCAGTAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVISWTAA*AASSCG
Trigger: CCCACAGCTACTGGCTGCTCAAGCGGCTGTCCAGGA...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CAGAGGCTCCAGCACCGAGGCGGCGGCATCAGTGGAGATCCACATGCTGCTCTGCAGCTGGTCCAGCACTaGGCGCAGCAGCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: QRLQHRGGGISGDPHAALQLVQH*AQQHRQ
Trigger: CTGACGGTGCTGCTGCGCTCAGTGCTGGACCAGCTG...CAGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCTCGGTGCTGGAGCCTCTG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR TCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGGGCAATTTCCTTTTTaGGCAGCTTTGCCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRGQFPF*AALPAC
Trigger: GCAAGCGGGCAAAGCTGCTCAAAAAGGAAATTGCCC...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCGTCAGTCAATGTCACTaGGGTCGCTGGTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAVSQCH*GRWSAP
Trigger: GGGAGCCGACCAGCGACCTCAGTGACATTGACTGAC...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCTTACCAGTGCGCTCTaGGTGCAAGCGCTATGTGAT +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCLTSAL*VQALCD
Trigger: ATCACATAGCGCTTGCACTCAGAGCGCACTGGTAAG...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCTGATCTATTGGGCCTaGGAAAAAGCCCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRLIYWA*EKALRE
Trigger: CTCCCTGAGGGCTTTTTCTCAGGCCCAATAGATCAG...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404034.5
CDS-3UTR GCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGAAGAAGGATGCCTCGCTaGAGAGCCTCGATGACATCG +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRRRMPR*RASMTS
Trigger: CGATGTCATCGAGGCTCTGCAGCGAGGCATCCTTCT...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAAGAAGGATGCCTCGCTaGAGAGCCTCGATGACATCG +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRRRMPR*RASMTS
Trigger: CGATGTCATCGAGGCTCTGCAGCGAGGCATCCTTCT...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGTTCTGGTTCTCGCAGTaGGACTCCTTCTCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTEFWFSQ*DSFSKR
Trigger: CCGCTTCGAGAAGGAGTCGCACTGCGAGAACCAGAA...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGCGCGCTCCAGGTCGTaGCGCAGCCGCTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: IKESDASSTAWGRATDALARSRS*RSRCQY
Trigger: GTACTGGCAGCGGCTGCGGCACGACCTGGAGCGCGC...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGCGGGGTCCTTGTCTTaGAGCTGGTCCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFAGSLS*SWSSTE
Trigger: CTCAGTGCTGGACCAGCTGCAAGACAAGGACCCCGC...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTACCTCGCGCCGGGCCTaGCTCAGAACAACACCTCCC +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWATSRRA*LRTTPP
Trigger: GGGAGGTGTTGTTCTGAGGCAGGCCCGGCGCGAGGT...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCGGCAGGGGCTGGCTGTaGTGCTGGCTCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAGRGWL*CWLSLF
Trigger: AAACAAGCTGAGCCAGCAGCACAGCCAGCCCCTGCC...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGCAGGGGCTGGCTGTaGTGCTGGCTCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFGRGWL*CWLSLF
Trigger: AAACAAGCTGAGCCAGCAGCACAGCCAGCCCCTGCC...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAACTGGCCGACTTCGGCTaGGATCCTGGCCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQLADFG*DPGRLG
Trigger: GCCAAGGCGGCCAGGATCGCAGCCGAAGTCGGCCAG...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCGTGCCGTGGGCGCTaGGGAGGGCCTCGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWAACRGR*GGPRFS
Trigger: AGAAAAACGAGGCCCTCCCCAGCGCCCACGGCACGC...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAAACACAGGAGGCCTCCTaGGGGCGGACGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQTQEAS*GRTEGC
Trigger: ACAGCCCTCCGTCCGCCCCCAGGAGGCCTCCTGTGT...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCAGTTTCCACCGGGCTaGAGGGATGTTCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAQFPPG*RDVPHP
Trigger: GGGGTGAGGAACATCCCTCCAGCCCGGTGGAAACTG...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGACCTCCGGGTGCAGCCTaGAGGCGTGTGGACATCACA +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRPPGAA*RRVDIT
Trigger: TGTGATGTCCACACGCCTCCAGGCTGCACCCGGAGG...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCTCAGCCGCAGCTCCATaGCGACCTGCTCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAASAAAP*RPAPPS
Trigger: TGAAGGTGGAGCAGGTCGCCATGGAGCTGCGGCTGA...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGTCCTCCAGGCCCAGGTaGGCTCTGTTGGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWSSRPR*ALLAGS
Trigger: GGACCCCGCCAACAGAGCCCACCTGGGCCTGGAGGA...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCGGTAGCCGCTGCACTTaGCCCACACCACCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAGSRCT*PTPPSE
Trigger: CTCTGAAGGTGGTGTGGGCCAAGTGCAGCGGCTACC...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CAGCACCGAGGCGGCGGCATCAGTGGAGATCCACATGCTGCTCTGGCCGACTTCATGGTGACGCCGTTGTaGTGGCCAGGCACACGGGGC +
Preference number: 4 (lower is better)
Translates to: QHRGGGISGDPHAALADFMVTPL*WPGTRG
Trigger: GCCCCGTGTGCCTGGCCACCACAACGGCGTCACCAT...GAAGTCGGCCAGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCTCGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCAGCTTATCAACACTATaGACAAGACCCGCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCSLSTL*TRPALA
Trigger: CGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCT...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTAGCTTATCAACACTATaGACAAGACCCGCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRSLSTL*TRPALA
Trigger: CGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCT...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCACATCGCCACTACTaGCGCGGGTGGGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWAAHRHY*RGWALE
Trigger: CTCCAGAGCCCACCCGCGCCAGTAGTGGCGATGTGC...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGCAGACAAAAAGGTTTTaGTCCCTAGCTGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRQTKRF*SLAEEK
Trigger: CTTCTCCTCAGCTAGGGACCAAAACCTTTTTGTCTG...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGCGGCCGACTTCTCGATaGACTTGTAGTACACAGGAG +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMRPTSR*TCSTQE
Trigger: CTCCTGTGTACTACAAGTTCATCGAGAAGTCGGCCG...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGATGCTGTGAGCTTCGCTaGGACTGCAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRCCELR*DCRLDC
Trigger: GCAGTCCAGCCTGCAGTCTCAGCGAAGCTCACAGCA...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGCGCTGTTTTCCTTGTTaGTGTTGCACTCACTCATCT +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAARCFPC*CCTHSS
Trigger: AGATGAGTGAGTGCAACAGCAACAAGGAAAACAGCG...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCAACTCAAACATGCTCTaGGACACGGCGGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAANSNML*DTAGTQ
Trigger: CTGCGTCCCCGCCGTGTCGCAGAGCATGTTTGAGTT...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTTCGTCGATCAGAGACTaGTGCTCGCCCTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFSSIRD*CSPCFW
Trigger: CCAGAAGCAGGGCGAGCAGCAGTCTCTGATCGACGA...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGAGAAGAGGATCACGTTaGTGTTCTGACACTCCCCGT +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRRRGSR*CSDTPR
Trigger: ACGGGGAGTGTCAGAACAGCAACGTGATCCTCTTCT...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCTTTGTGGCACTGGATaGAGGCACCCACGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAALCGTG*RHPRPS
Trigger: AGAAGGGCGTGGGTGCCTGCATCCAGTGCCACAAAG...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTCACTGAGGTCGCTGGTCGGCTCCCCGTGGACGCGGCTCAGGTGGTTCATGGCAGCTCCATGGCGACCTaGTCCACCTTCACCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VTEVAGRLPVDAAQVVHGSSMAT*STFTCS
Trigger: TGAGCAGGTGAAGGTGGAGCAGGTCGCCATGGAGCT...GCCATGAACCACCTGAGCCGCGTCCACGGGGAGCCGACCAGCGACCTCAGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR GCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTCTTTTTGAGCAGCTTTaGCCGCTTGCTCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFLFEQL*PLAPGA
Trigger: GGCTCCCGGAGCAAGCGGGCAAAGCTGCTCAAAAAG...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTAGTTCCCATTCTCGATaGAGGAGATCAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRSSHSR*RRSAHC
Trigger: GCAGTGAGCTGATCTCCTGCATCGAGAATGGGAACT...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGGGGTCGATGATCAGTaGCGGGTAGGAGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWAGVDDQ*RVGGVA
Trigger: GGCTACCCCTCCTACCCGGCACTGATCATCGACCCC...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCCAGTGCGCTCTGAGTaGAAGCGCTATGTGATTCAT +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRPVRSE*KRYVIH
Trigger: ATGAATCACATAGCGCTTGCACTCAGAGCGCACTGG...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACGCTTCTTCCGCTGAATaGCCACCTGATTCGCAATCC +
Preference number: 4 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHASSAE*PPDSQS
Trigger: GGATTGCGAATCAGGTGGCCATTCAGCGGAAGAAGC...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGAGCTTCTTCCGCTGAATaGCCACCTGATTCGCAATCC +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRASSAE*PPDSQS
Trigger: GGATTGCGAATCAGGTGGCCATTCAGCGGAAGAAGC...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGATCAGCCGCAGCTCCATaGCGACCTGCTCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRSAAAP*RPAPPS
Trigger: TGAAGGTGGAGCAGGTCGCCATGGAGCTGCGGCTGA...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTCAGCCGCAGCTCCATaGCGACCTGCTCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVISAAAP*RPAPPS
Trigger: TGAAGGTGGAGCAGGTCGCCATGGAGCTGCGGCTGA...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGACCGCGACCTTTTCCTTaGCTGCAGAAGAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRPRPFP*LQKSLQ
Trigger: TTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGG...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCAGAGCGGGCTGTTGCTaGAGGAGATGCTGGACTCGG +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIRAGCC*RRCWTR
Trigger: CCGAGTCCAGCATCTCCTCCAGCAACAGCCCGCTCT...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTCGATCCTGGCCGCCTTaGCGTAGTTCCCATTCTCGA +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFRSWPP*RSSHSR
Trigger: TCGAGAATGGGAACTACGCCAAGGCGGCCAGGATCG...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCAATCAGCACGTCCAGGGGTaGGGCCGGGATGGTGACGCC +
Preference number: 4 (lower is better)
Translates to: SLSTLWTRPALAAGPSVNQHVQG*GRDGDA
Trigger: GGCGTCACCATCCCGGCCCCACCCCTGGACGTGCTG...ATTGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCGCTTCTCATCAGACTTaGTCTGCATGTGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCASHQT*SACAPQ
Trigger: TTGGGGAGCACATGCAGACCAAGTCTGATGAGAAGC...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGCTGGTCGGCTCCCCGTaGACGCGGCTCAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: IKESDASSTAWGRATDALLVGSP*TRLRWF
Trigger: GAACCACCTGAGCCGCGTCCACGGGGAGCCGACCAG...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGAAGCTTATCAACACTATaGACAAGACCCGCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRSLSTL*TRPALA
Trigger: CGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCT...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCACATCGCCACTACTaGCGCGGGTGGGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWAHRHY*RGWALE
Trigger: CTCCAGAGCCCACCCGCGCCAGTAGTGGCGATGTGC...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGGTCATCTTCCAATATaGTCTCCAGGGGATCAAAAA +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGGHLPI*SPGDQK
Trigger: TTTTTGATCCCCTGGAGATCATATTGGAAGATGACC...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGGTCATCTTCCAATATaGTCTCCAGGGGATCAAAAA +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAGHLPI*SPGDQK
Trigger: TTTTTGATCCCCTGGAGATCATATTGGAAGATGACC...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGACTCTGTTGTTTTTGTaGCGCTTAGTTCTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRTLLFL*RLVLKQ
Trigger: CTGCTTAAGAACTAAGCGTCACAAAAACAACAGAGT...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTATCACGTTGCTGTTCTaGCACTCCCCGTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFITLLF*HSPSMQ
Trigger: CTGCATGGACGGGGAGTGTCAGAACAGCAACGTGAT...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGTCCTGGACAGCCGCTTaGGCAGCCAGTAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWSWTAA*AASSCG
Trigger: CCCACAGCTACTGGCTGCTCAAGCGGCTGTCCAGGA...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTTGCTGTGAGCTTCGCTaGGACTGCAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWACCELR*DCRLDC
Trigger: GCAGTCCAGCCTGCAGTCTCAGCGAAGCTCACAGCA...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGAATTTTCTCTCTGCTGTaGGCTTCGCTGAGACTGCAG +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRIFSLL*ASLRLQ
Trigger: CTGCAGTCTCAGCGAAGCTCACAGCAGAGAGAAAAT...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTTCACCTGCTCACGCTTaGGCTTCTCCCGCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWASPAHA*ASPACA
Trigger: TGCGCAAGCGGGAGAAGCTCAAGCGTGAGCAGGTGA...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGCCCCAAAGCCGTTGGTaGGACCTGCGTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: IKESDASSTAWGRATDALPQSRW*DLRPGA
Trigger: AGCGCCTGGACGCAGGTCTCACCAACGGCTTTGGGG...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGGCGGAGTGTTTTTGGTaGTCTGCAAGTGATGTACAC +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRAECFW*SASDVH
Trigger: GTGTACATCACTTGCAGATCACCAAAAACACTCCGC...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCGGAGTGTTTTTGGTaGTCTGCAAGTGATGTACAC +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRAECFW*SASDVH
Trigger: GTGTACATCACTTGCAGATCACCAAAAACACTCCGC...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAACCCCGTCCATGCAGATaGAGCACACGGCGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQPRPCR*STRRPR
Trigger: ACGAGGACGCCGTGTGCTGCATCTGCATGGACGGGG...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCTGCTCCACCTTCACCTaGTCACGCTTGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAACSTFT*SRLSFS
Trigger: GGAGAAGCTCAAGCGTGAGCAGGTGAAGGTGGAGCA...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CAGCACCGAGGCGGCGGCATCAGTGGAGATCCACATGCTGCTCTGGCCGACTTCGCGGGGTCCTTGTCTTaGAGCTGGTCCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: QHRGGGISGDPHAALADFAGSLS*SWSSTE
Trigger: CTCAGTGCTGGACCAGCTGCAAGACAAGGACCCCGC...GAAGTCGGCCAGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCTCGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR GCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGATTCAGACTCACGGGCTaGGCAAATATCCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRFRLTG*ANILAG
Trigger: CCCCGCCAGGATATTTGCGCAGCCCGTGAGTCTGAA...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTAGGGGCTGGCTGTGCTaGTGGCTCAGCTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWARGWLC*WLSLFR
Trigger: CCGAAACAAGCTGAGCCAGCAGCACAGCCAGCCCCT...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAAGCCGTTGGTGAGACCTaGGTCCAGGCGCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQAVGET*VQALSW
Trigger: CCAGGAAAGCGCCTGGACGCAGGTCTCACCAACGGC...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCACAAGAGCCGGTTTaGCCCGCCCACATTTGGGCG +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWAQEPV*PAHIWA
Trigger: CGCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGC...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGCGGTCCTCCAGCGTGTaGCGTCGCACAAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: IKESDASSTAWGRATDALRSSSV*RRTRAG
Trigger: ACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCG...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGATGGAGATCCACATGCTaGTCTGGCCGACTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRWRSTC*SGRLRL
Trigger: CAGCCGAAGTCGGCCAGAGCAGCATGTGGATCTCCA...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGTCATCAGACTTGGTCTaGATGTGCTCCCCAATCTTC +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRSSDLV*MCSPIF
Trigger: GAAGATTGGGGAGCACATGCAGACCAAGTCTGATGA...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAAGAAGAGAACAGAAGTaGGTCTGTTTACATCGCTTG +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGRREQK*VCLHRL
Trigger: CAAGCGATGTAAACAGACGCACTTCTGTTCTCTTCT...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAACCTCCGGGTGCAGCCTaGAGGCGTGTGGACATCACA +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQPPGAA*RRVDIT
Trigger: TGTGATGTCCACACGCCTCCAGGCTGCACCCGGAGG...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGCTGAGACTGCAGGCTaGACTGCAGCCGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: IKESDASSTAWGRATDALAETAG*TAAAAA
Trigger: TGCTGCGGCGGCTGCAGTCCAGCCTGCAGTCTCAGC...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGATCCTTGTCTTGCAGCTaGTCCAGCACTGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRSLSCS*SSTERS
Trigger: GCTGCGCTCAGTGCTGGACCAGCTGCAAGACAAGGA...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAACCAGGTGGGCTCTGTTaGCGGGGTCCAGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQPGGLC*RGPATC
Trigger: ACAGGTTGCTGGACCCCGCCAACAGAGCCCACCTGG...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAAGTCCAGGCGCTTTCCTaGGGACTCCTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQVQALS*GLLLHL
Trigger: GAGGTGGAGGAGGAGTCCCCAGGAAAGCGCCTGGAC...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGATCAGCTCACTGCGGTCCTCCAGCGTGTGCCGTCGCACAAGAGCCGGTTTGCGTCCAGGCGCTTTCCTaGGGACTCCTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: RSAHCGPPACAVAQEPVCVQALS*GLLLHL
Trigger: GAGGTGGAGGAGGAGTCCCCAGGAAAGCGCCTGGAC...GCAAACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCGCAGTGAGCTGATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGCTTCGGCTGCGATCCTaGCCGCCTTGGCGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWLRLRS*PPWRSS
Trigger: GGAACTACGCCAAGGCGGCCAGGATCGCAGCCGAAG...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCAGGCGGCGGCATCAGTaGAGATCCACATGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIRRRHQ*RSTCCS
Trigger: AGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCT...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTCGGCCTTCCGGATGCTaGAATTCCTCCCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFRPSGC*NSSLPS
Trigger: TGATGGAAGGGAGGAATTCCAGCATCCGGAAGGCCG...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCGGCTCAGGTGGTTCATaGCGCGGTCAAAAGCGATCC +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIGSGGS*RGQKRS
Trigger: GGATCGCTTTTGACCGCGCCATGAACCACCTGAGCC...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGTGGGGCCGGGATGGTaGCGCCGTTGTGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATVGPGW*RRCGGQ
Trigger: CTGGCCACCACAACGGCGTCACCATCCCGGCCCCAC...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCACATATCAAAGAAAGTaGCGCCAGCAGCACGGCCTG +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAATYQRK*RQQHGL
Trigger: CAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGT...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCGTTTTGGTCCCTAGCTaGGGAGAAGTTGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAVLVPS*GEVGWV
Trigger: AACCCAGCCAACTTCTCCTCAGCTAGGGACCAAAAC...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAAAAACCACAAAAGCATaGTTGGACAGATCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGKTTKA*LDRSSS
Trigger: TGAGCTAGATCTGTCCAAGCATGCTTTTGTGGTTTT...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR GCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGAAAATACTGATCCTGTaGAAGCGCCCTTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAKILIL*KRPSIS
Trigger: AGAAATTGAAGGGCGCTTGCACAGGATCAGTATTTT...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTCGCTGTTTTCCTTGTTaGTGTTGCACTCACTCATCT +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRRCFPC*CCTHSS
Trigger: AGATGAGTGAGTGCAACAGCAACAAGGAAAACAGCG...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTCGATCAGAGACTGCTaGTCGCCCTGCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVISIRDC*SPCFWF
Trigger: GAACCAGAAGCAGGGCGAGCAGCAGTCTCTGATCGA...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTTCGTGCCGCAGCCGCTaGCAGTACTTCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWASCRSR*QYFSFS
Trigger: AGAGAAGCTGAAGTACTGGCAGCGGCTGCGGCACGA...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGGCCGCTCAGGCAGGTaGATCCCCGAGGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRAGRSGR*IPEASS
Trigger: GGAAGAGGCCTCGGGGATGCACCTGCCTGAGCGGCC...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTCGGAGTCTCCGCATGTaGTCCGCGACCTTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWARSLRM*SATFSL
Trigger: CAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCG...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGACTTGGTCTGCATGTaGTCCCCAATCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFDLVCM*SPIFST
Trigger: CGTGCTGAAGATTGGGGAGCACATGCAGACCAAGTC...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACTCATCAGACTTGGTCTaGATGTGCTCCCCAATCTTC +
Preference number: 4 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHSSDLV*MCSPIF
Trigger: GAAGATTGGGGAGCACATGCAGACCAAGTCTGATGA...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp ATGTCACTGAGGTCGCTGGTCGGCTCCCCGTGGACGCGGCTCAGGTGGTTCATGGCACGGCCTTCCGGATaGTGGAATTCCTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: MSLRSLVGSPWTRLRWFMARPSG*WNSSLP
Trigger: TGGAAGGGAGGAATTCCAGCATCCGGAAGGCCGTGC...CATGAACCACCTGAGCCGCGTCCACGGGGAGCCGACCAGCGACCTCAGTGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR GCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCACAGACGCACTGGGCTaGCCGGACGTGCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRATDALG*PDVPTP
Trigger: TGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGT...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGCTTCTTCCGCTGAATaGCCACCTGATTCGCAATCC +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFASSAE*PPDSQS
Trigger: GGATTGCGAATCAGGTGGCCATTCAGCGGAAGAAGC...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAATGCTGGAGGAGATGCTaGACTCGGAGGCACAGCGTC +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQCWRRC*TRRHSV
Trigger: GACGCTGTGCCTCCGAGTCCAGCATCTCCTCCAGCA...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGAGAGCGGGCTGTTGCTaGAGGAGATGCTGGACTCGG +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWRAGCC*RRCWTR
Trigger: CCGAGTCCAGCATCTCCTCCAGCAACAGCCCGCTCT...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCCTTCGGCTGCGATCCTaGCCGCCTTGGCGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: YSLSTLWTRPALAAGPSVLRLRS*PPWRSS
Trigger: GGAACTACGCCAAGGCGGCCAGGATCGCAGCCGAAG...GACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CCA 90 bp CTCACTGCGGTCCTCCAGCGTGTGCCGTCGCACAAGAGCCGGTTTGCCCCGCCCGCTTCTCATCAGACTTaGTCTGCATGTGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LTAVLQRVPSHKSRFAPPASHQT*SACAPQ
Trigger: TTGGGGAGCACATGCAGACCAAGTCTGATGAGAAGC...GGGCGGGGCAAACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCGCAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGGACAAGACCCGCGCTaGCGGCCGGGCCGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATGQDPR*RPGRQS
Trigger: TGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCC...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACGTTCTTGGCAGACTTTaGGGGGCTTACACTTTTCGA +
Preference number: 4 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHVLGRL*GAYTFR
Trigger: TCGAAAAGTGTAAGCCCCCCAAAGTCTGCCAAGAAC...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCCGGCCGACTTCTCGATaGACTTGTAGTACACAGGAG +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIRPTSR*TCSTQE
Trigger: CTCCTGTGTACTACAAGTTCATCGAGAAGTCGGCCG...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTAGTAAGCGGTCTTTCTaGCGGAGAAGGTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWASKRSF*RRRWCH
Trigger: GTGGCACCACCTTCTCCGTCAGAAAGACCGCTTACT...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCGGGCAATTTCCTTTTTaGGCAGCTTTGCCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIGQFPF*AALPAC
Trigger: GCAAGCGGGCAAAGCTGCTCAAAAAGGAAATTGCCC...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCGTTTTGGTCCCTAGCTaGGGAGAAGTTGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIVLVPS*GEVGWV
Trigger: AACCCAGCCAACTTCTCCTCAGCTAGGGACCAAAAC...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGCAGGCACAGAGGCTATaGCCACCAGACAGGCATGCT +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWQAQRL*PPDRHA
Trigger: AGCATGCCTGTCTGGTGGGCATAGCCTCTGTGCCTG...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR GCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGCATGGGGAAGAAGGATaGCTCGCTGCAGAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWHGEEG*LAAEPR
Trigger: TCGAGGCTCTGCAGCGAGGCATCCTTCTTCCCCATG...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCTTTCCTTGTTGCTGTTaGACTCACTCATCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCFPCCC*THSSLE
Trigger: CTCAAGAGATGAGTGAGTGCAACAGCAACAAGGAAA...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGACGCTGTTTTCCTTGTTaGTGTTGCACTCACTCATCT +
Preference number: 4 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRRCFPC*CCTHSS
Trigger: AGATGAGTGAGTGCAACAGCAACAAGGAAAACAGCG...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGAACTCAAACATGCTCTaGGACACGGCGGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWNSNML*DTAGTQ
Trigger: CTGCGTCCCCGCCGTGTCGCAGAGCATGTTTGAGTT...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTTCAGGAACTCAAACATaGTCTGCGACACGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWASGTQT*SATRRG
Trigger: TCCCCGCCGTGTCGCAGAGCATGTTTGAGTTCCTGA...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTTCGATCAGAGACTGCTaGTCGCCCTGCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWASIRDC*SPCFWF
Trigger: GAACCAGAAGCAGGGCGAGCAGCAGTCTCTGATCGA...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGTCGTGCCGCAGCCGCTaGCAGTACTTCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWSCRSR*QYFSFS
Trigger: AGAGAAGCTGAAGTACTGGCAGCGGCTGCGGCACGA...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGTGGAGATCCACATGCTaGTCTGGCCGACTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWWRSTC*SGRLRL
Trigger: CAGCCGAAGTCGGCCAGAGCAGCATGTGGATCTCCA...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTCAATGCAATGCATTCTaGTCCCAAGCCAAGTTGAAT +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRQCNAF*SQAKLN
Trigger: ATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTG...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGTTGAAAAGTTTACTCTaGTCTGGGTTGAGTTCTACT +
Preference number: 4 (lower is better)
Translates to: RWAGRRERGHTHRRSRAALKSLL*SGLSST
Trigger: AGTAGAACTCAACCCAGAGCAGAGTAAACTTTTCAA...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACACCACGATGCGCACCTTaGGCTCCGGGAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATPRCAP*APGGHW
Trigger: CCAGTGCCCTCCCGGAGCCCAAGGTGCGCATCGTGG...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGTGCTCGCCCTGCTTCTaGTTCTCGCAGTGCGACTCC +
Preference number: 4 (lower is better)
Translates to: IKESDASSTAWGRATDALCSPCF*FSQCDS
Trigger: GGAGTCGCACTGCGAGAACCAGAAGCAGGGCGAGCA...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGTTTGCTTTGTGGCACTaGATGCAGGCACCCACGCCC +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWFALWH*MQAPTP
Trigger: GGGCGTGGGTGCCTGCATCCAGTGCCACAAAGCAAA...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCAATCCTCCGGGTGCAGCCTaGAGGCGTGTGGACATCACA +
Preference number: 4 (lower is better)
Translates to: SLSTLWTRPALAAGPSVNPPGAA*RRVDIT
Trigger: TGTGATGTCCACACGCCTCCAGGCTGCACCCGGAGG...ATTGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCGCTTCTTCCGCTGAATaGCCACCTGATTCGCAATCC +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIASSAE*PPDSQS
Trigger: GGATTGCGAATCAGGTGGCCATTCAGCGGAAGAAGC...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGTCCTTGTCTTGCAGCTaGTCCAGCACTGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWSLSCS*SSTERS
Trigger: GCTGCGCTCAGTGCTGGACCAGCTGCAAGACAAGGA...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAATCCTTGTCTTGCAGCTaGTCCAGCACTGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQSLSCS*SSTERS
Trigger: GCTGCGCTCAGTGCTGGACCAGCTGCAAGACAAGGA...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCGTGATCCAAATAATCTaGTACCTCCTTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCVIQII*YLLQTH
Trigger: GTGAGTCTGAAGGAGGTACCAGATTATTTGGATCAC...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGGTGATCCAAATAATCTaGTACCTCCTTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRVIQII*YLLQTH
Trigger: GTGAGTCTGAAGGAGGTACCAGATTATTTGGATCAC...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGACCGTTTCCTCATTGTaGCAAAGTCCATGGGATGTT +
Preference number: 4 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMTVSSL*QSPWDV
Trigger: AACATCCCATGGACTTTGCCACAATGAGGAAACGGT...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACACCGTTTCCTCATTGTaGCAAAGTCCATGGGATGTT +
Preference number: 4 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHTVSSL*QSPWDV
Trigger: AACATCCCATGGACTTTGCCACAATGAGGAAACGGT...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAACCGTTTCCTCATTGTaGCAAAGTCCATGGGATGTT +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRTVSSL*QSPWDV
Trigger: AACATCCCATGGACTTTGCCACAATGAGGAAACGGT...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCCCGCGACCTTTTCCTTaGCTGCAGAAGAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIPRPFP*LQKSLQ
Trigger: TTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGG...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGAGGCGGCGGCATCAGTaGAGATCCACATGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWRRRHQ*RSTCCS
Trigger: AGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCT...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGTGACGCCGTTGTGGTaGCCAGGCACACGGGGCATC +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRAVTPLW*PGTRGI
Trigger: GATGCCCCGTGTGCCTGGCCACCACAACGGCGTCAC...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCCACTCACTCATCTCTTaGGCAGTGAGGTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIHSLIS*AVRSSS
Trigger: GGAAGATGACCTCACTGCTCAAGAGATGAGTGAGTG...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTCGGCCGACTTCTCGATaGACTTGTAGTACACAGGAG +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWARPTSR*TCSTQE
Trigger: CTCCTGTGTACTACAAGTTCATCGAGAAGTCGGCCG...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGAGTAAGCGGTCTTTCTaGCGGAGAAGGTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWSKRSF*RRRWCH
Trigger: GTGGCACCACCTTCTCCGTCAGAAAGACCGCTTACT...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCGCGGAGTGTTTTTGGTaGTCTGCAAGTGATGTACAC +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAAECFW*SASDVH
Trigger: GTGTACATCACTTGCAGATCACCAAAAACACTCCGC...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGTTTCCTTGTTGCTGTTaGACTCACTCATCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTEFPCCC*THSSLE
Trigger: CTCAAGAGATGAGTGAGTGCAACAGCAACAAGGAAA...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGGCTGTACTCCACGATaGGCACCTTGGGCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRAGCTPR*APWAPG
Trigger: TCCCGGAGCCCAAGGTGCGCATCGTGGAGTACAGCC...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp ACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCATCGTGCCGCAGCCGCTaGCAGTACTTCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TAYQHYGQDPRWRPGRQSSCRSR*QYFSFS
Trigger: AGAGAAGCTGAAGTACTGGCAGCGGCTGCGGCACGA...TGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR GCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCGACCTTTTCCTTGGCTaGAGAAGAGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIDLFLG*RRVSNL
Trigger: GAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTC...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACACGGTCCTCCAGCGTGTaGCGTCGCACAAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATRSSSV*RRTRAG
Trigger: ACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCG...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCAATAGGAGATCAGCTCACTaGGGTCCTCCAGCGTGTGCC +
Preference number: 4 (lower is better)
Translates to: SLSTLWTRPALAAGPSVNRRSAH*GPPACA
Trigger: GGCACACGCTGGAGGACCGCAGTGAGCTGATCTCCT...ATTGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR GCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCAGTTCCCATTCTCGATaGAGGAGATCAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVISSHSR*RRSAHC
Trigger: GCAGTGAGCTGATCTCCTGCATCGAGAATGGGAACT...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp ACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCATGGAGATCCACATGCTaGTCTGGCCGACTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: TAYQHYGQDPRWRPGRQSWRSTC*SGRLRL
Trigger: CAGCCGAAGTCGGCCAGAGCAGCATGTGGATCTCCA...TGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR GCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGACTTGGTCTGCATGTaGTCCCCAATCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWADLVCM*SPIFST
Trigger: CGTGCTGAAGATTGGGGAGCACATGCAGACCAAGTC...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGCACGGCCTTCCGGATaGTGGAATTCCTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: IKESDASSTAWGRATDALARPSG*WNSSLP
Trigger: TGGAAGGGAGGAATTCCAGCATCCGGAAGGCCGTGC...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGCGTGCCGTGGGCGCTaGGGAGGGCCTCGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATACRGR*GGPRFS
Trigger: AGAAAAACGAGGCCCTCCCCAGCGCCCACGGCACGC...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGCTGAGACTGCAGGCTaGACTGCAGCCGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATAETAG*TAAAAA
Trigger: TGCTGCGGCGGCTGCAGTCCAGCCTGCAGTCTCAGC...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAGTGATCCAAATAATCTaGTACCTCCTTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRVIQII*YLLQTH
Trigger: GTGAGTCTGAAGGAGGTACCAGATTATTTGGATCAC...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CGGCTCAGGTGGTTCATGGCGCGGTCAAAAGCGATCCGCACGGCCTTCCGGATGCCGCGACCTTTTCCTTaGCTGCAGAAGAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: RLRWFMARSKAIRTAFRMPRPFP*LQKSLQ
Trigger: TTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGG...CATCCGGAAGGCCGTGCGGATCGCTTTTGACCGCGCCATGAACCACCTGAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CCA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGATCCACATGCTGCTCTaGCCGACTTCGGCTGCGATC +
Preference number: 4 (lower is better)
Translates to: IKESDASSTAWGRATDALIHMLL*PTSAAI
Trigger: GATCGCAGCCGAAGTCGGCCAGAGCAGCATGTGGAT...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTGGTTCATGGCGCGGTCAAAAGCGATCCGCACGGCCTTCCGGATGCTGGAATTGGTAGCCGCTGCACTTaGCCCACACCACCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VVHGAVKSDPHGLPDAGIGSRCT*PTPPSE
Trigger: CTCTGAAGGTGGTGTGGGCCAAGTGCAGCGGCTACC...AATTCCAGCATCCGGAAGGCCGTGCGGATCGCTTTTGACCGCGCCATGAACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAACGGCCTTCCGGATGCTaGAATTCCTCCCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQRPSGC*NSSLPS
Trigger: TGATGGAAGGGAGGAATTCCAGCATCCGGAAGGCCG...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTAAGTTTACTCTGCTCTaGGTTGAGTTCTACTGGTTT +
Preference number: 4 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRKFTLL*VEFYWF
Trigger: AAACCAGTAGAACTCAACCCAGAGCAGAGTAAACTT...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGACAGACAAAAAGGTTTTaGTCCCTAGCTTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRQTKRF*SLASSP
Trigger: GGGCGAGGAAGCTAGGGACCAAAACCTTTTTGTCTG...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR TCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCTCACCTGCTCACGCTTaGGCTTCTCCCGCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRASPAHA*ASPACA
Trigger: TGCGCAAGCGGGAGAAGCTCAAGCGTGAGCAGGTGA...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGAGAAGGATGCCTCGCTaGAGAGCCTCGATGACATCG +
Preference number: 4 (lower is better)
Translates to: IKESDASSTAWGRATDALRRMPR*RASMTS
Trigger: CGATGTCATCGAGGCTCTGCAGCGAGGCATCCTTCT...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTCGCTGTTTTCCTTGTTaGTGTTGCACTCACTCATCT +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFRCFPC*CCTHSS
Trigger: AGATGAGTGAGTGCAACAGCAACAAGGAAAACAGCG...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGGCTGTACTCCACGATaGGCACCTTGGGCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATGCTPR*APWAPG
Trigger: TCCCGGAGCCCAAGGTGCGCATCGTGGAGTACAGCC...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTAGAAGAGGATCACGTTaGTGTTCTGACACTCCCCGT +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWARRGSR*CSDTPR
Trigger: ACGGGGAGTGTCAGAACAGCAACGTGATCCTCTTCT...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCGACTGCAGGCTGGACTaGAGCCGCCGCAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTDCRLD*SRRSRG
Trigger: CCCCCTGCTGCGGCGGCTGCAGTCCAGCCTGCAGTC...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTGGTTCATGGCGCGGTCAAAAGCGATCCGCACGGCCTTCCGGATGCTGGAATTTGTTGCTGGAGGAGATaGTGGACTCGGAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: VVHGAVKSDPHGLPDAGICCWRR*WTRRHS
Trigger: GCTGTGCCTCCGAGTCCAGCATCTCCTCCAGCAACA...AATTCCAGCATCCGGAAGGCCGTGCGGATCGCTTTTGACCGCGCCATGAACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR GCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCAGGAGATCAGCTCACTaGGGTCCTCCAGCGTGTGCC +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRARRSAH*GPPACA
Trigger: GGCACACGCTGGAGGACCGCAGTGAGCTGATCTCCT...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGACTTGGTCTGCATGTaGTCCCCAATCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWDLVCM*SPIFST
Trigger: CGTGCTGAAGATTGGGGAGCACATGCAGACCAAGTC...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGATCATCAGACTTGGTCTaGATGTGCTCCCCAATCTTC +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRSSDLV*MCSPIF
Trigger: GAAGATTGGGGAGCACATGCAGACCAAGTCTGATGA...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGCGTCCGCTTACCAGTaGGCTCTGAGTGCAAGCGCT +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRAASAYQ*ALSASA
Trigger: AGCGCTTGCACTCAGAGCGCACTGGTAAGCGGACGC...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCTTACACTTTTCGATTTaGAGAAGAGAACAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: PAARPGDVRQTHWAARTCLHFSI*RREQKC
Trigger: GCACTTCTGTTCTCTTCTGCAAATCGAAAAGTGTAA...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAACCGCGACCTTTTCCTTaGCTGCAGAAGAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQPRPFP*LQKSLQ
Trigger: TTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGG...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCTGCTGGAGGAGATGCTaGACTCGGAGGCACAGCGTC +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRACWRRC*TRRHSV
Trigger: GACGCTGTGCCTCCGAGTCCAGCATCTCCTCCAGCA...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCTTCTCATCAGACTTaGTCTGCATGTGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWAASHQT*SACAPQ
Trigger: TTGGGGAGCACATGCAGACCAAGTCTGATGAGAAGC...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp TACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCCGGCCTTCCGGATGCTaGAATTCCTCCCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: YSLSTLWTRPALAAGPSVRPSGC*NSSLPS
Trigger: TGATGGAAGGGAGGAATTCCAGCATCCGGAAGGCCG...GACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CCA 90 bp AGATCAGCTCACTGCGGTCCTCCAGCGTGTGCCGTCGCACAAGAGCCGGTTTGCAGCTTATCAACACTATaGACAAGACCCGCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: RSAHCGPPACAVAQEPVCSLSTL*TRPALA
Trigger: CGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCT...GCAAACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCGCAGTGAGCTGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR TCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTCATCTTCCAATATaGTCTCCAGGGGATCAAAAA +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFGHLPI*SPGDQK
Trigger: TTTTTGATCCCCTGGAGATCATATTGGAAGATGACC...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGCACTCACTCATCTCTTaGGCAGTGAGGTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWHSLIS*AVRSSS
Trigger: GGAAGATGACCTCACTGCTCAAGAGATGAGTGAGTG...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAAATTTTCTCTCTGCTGTaGGCTTCGCTGAGACTGCAG +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQIFSLL*ASLRLQ
Trigger: CTGCAGTCTCAGCGAAGCTCACAGCAGAGAGAAAAT...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGTCAGTCAATGTCACTaGGGTCGCTGGTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATVSQCH*GRWSAP
Trigger: GGGAGCCGACCAGCGACCTCAGTGACATTGACTGAC...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGAGAAGAGGATCACGTTaGTGTTCTGACACTCCCCGT +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWRRGSR*CSDTPR
Trigger: ACGGGGAGTGTCAGAACAGCAACGTGATCCTCTTCT...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCTTCAGACTCACGGGCTaGGCAAATATCCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRAFRLTG*ANILAG
Trigger: CCCCGCCAGGATATTTGCGCAGCCCGTGAGTCTGAA...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGGCAGGGGCTGGCTGTaGTGCTGGCTCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATGRGWL*CWLSLF
Trigger: AAACAAGCTGAGCCAGCAGCACAGCCAGCCCCTGCC...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCCGGAGTCTCCGCATGTaGTCCGCGACCTTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRARSLRM*SATFSL
Trigger: CAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCG...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCTGTTGCTGGAGGAGATaGTGGACTCGGAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRACCWRR*WTRRHS
Trigger: GCTGTGCCTCCGAGTCCAGCATCTCCTCCAGCAACA...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCCTGGCCGACTTCGGCTaGGATCCTGGCCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTLADFG*DPGRLG
Trigger: GCCAAGGCGGCCAGGATCGCAGCCGAAGTCGGCCAG...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTTCATCAGACTTGGTCTaGATGTGCTCCCCAATCTTC +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWASSDLV*MCSPIF
Trigger: GAAGATTGGGGAGCACATGCAGACCAAGTCTGATGA...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTCAATGCAATGCATTCTaGTCCCAAGCCAAGTTGAAT +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFQCNAF*SQAKLN
Trigger: ATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTG...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCAGAAGAGAACAGAAGTaGGTCTGTTTACATCGCTTG +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAARREQK*VCLHRL
Trigger: CAAGCGATGTAAACAGACGCACTTCTGTTCTCTTCT...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGATTACACTTTTCGATTTaGAGAAGAGAACAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRLHFSI*RREQKC
Trigger: GCACTTCTGTTCTCTTCTGCAAATCGAAAAGTGTAA...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACATGCTCGCCCTGCTTCTaGTTCTCGCAGTGCGACTCC +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATCSPCF*FSQCDS
Trigger: GGAGTCGCACTGCGAGAACCAGAAGCAGGGCGAGCA...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCTTTGCTTTGTGGCACTaGATGCAGGCACCCACGCCC +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRAFALWH*MQAPTP
Trigger: GGGCGTGGGTGCCTGCATCCAGTGCCACAAAGCAAA...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp ACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCAGCTTCTTCCGCTGAATaGCCACCTGATTCGCAATCC +
Preference number: 4 (lower is better)
Translates to: TAYQHYGQDPRWRPGRQSASSAE*PPDSQS
Trigger: GGATTGCGAATCAGGTGGCCATTCAGCGGAAGAAGC...TGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGTGATCCAAATAATCTaGTACCTCCTTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFVIQII*YLLQTH
Trigger: GTGAGTCTGAAGGAGGTACCAGATTATTTGGATCAC...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCACCGTTTCCTCATTGTaGCAAAGTCCATGGGATGTT +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVITVSSL*QSPWDV
Trigger: AACATCCCATGGACTTTGCCACAATGAGGAAACGGT...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCTCCTCCAGGCCCAGGTaGGCTCTGTTGGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTSSRPR*ALLAGS
Trigger: GGACCCCGCCAACAGAGCCCACCTGGGCCTGGAGGA...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCCTGGTCGGCTCCCCGTaGACGCGGCTCAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTLVGSP*TRLRWF
Trigger: GAACCACCTGAGCCGCGTCCACGGGGAGCCGACCAG...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGCGCCCAGACGGAGATaGGTTCCTAGAAAACTTGGA +
Preference number: 4 (lower is better)
Translates to: IKESDASSTAWGRATDALAPRRR*VPRKLG
Trigger: TCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGC...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCCAGACAAAAAGGTTTTaGTCCCTAGCTGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIQTKRF*SLAEEK
Trigger: CTTCTCCTCAGCTAGGGACCAAAACCTTTTTGTCTG...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCCCCCAAAGCCGTTGGTaGGACCTGCGTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTPQSRW*DLRPGA
Trigger: AGCGCCTGGACGCAGGTCTCACCAACGGCTTTGGGG...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCAGTGCAAGCGCTATGTaGTTCATTATCAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: KVTPAARPGDVRQTHWAASASAM*FIIKCD
Trigger: GTCACATTTGATAATGAATCACATAGCGCTTGCACT...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTAGTGCAAGCGCTATGTaGTTCATTATCAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFSASAM*FIIKCD
Trigger: GTCACATTTGATAATGAATCACATAGCGCTTGCACT...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCAGAAGGATGCCTCGCTaGAGAGCCTCGATGACATCG +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRARRMPR*RASMTS
Trigger: CGATGTCATCGAGGCTCTGCAGCGAGGCATCCTTCT...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACACATGGGGAAGAAGGATaGCTCGCTGCAGAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATHGEEG*LAAEPR
Trigger: TCGAGGCTCTGCAGCGAGGCATCCTTCTTCCCCATG...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCTCAGAGGCCTCCGGGTaGAGCCTGGAGGCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTSEASG*SLEACG
Trigger: TCCACACGCCTCCAGGCTGCACCCGGAGGCCTCTGA...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCACCTCGCGCCGGGCCTaGCTCAGAACAACACCTCCC +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTTSRRA*LRTTPP
Trigger: GGGAGGTGTTGTTCTGAGGCAGGCCCGGCGCGAGGT...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACACGGAGTCTCCGCATGTaGTCCGCGACCTTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATRSLRM*SATFSL
Trigger: CAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCG...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGACAATGCAATGCATTCTaGTCCCAAGCCAAGTTGAAT +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRQCNAF*SQAKLN
Trigger: ATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTG...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACATCCTTGTCTTGCAGCTaGTCCAGCACTGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATSLSCS*SSTERS
Trigger: GCTGCGCTCAGTGCTGGACCAGCTGCAAGACAAGGA...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGCTGCGCAAATATCCTaGCGGGGTCCTTGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRAAAQIS*RGPCLA
Trigger: TGCAAGACAAGGACCCCGCCAGGATATTTGCGCAGC...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp ATGTCACTGAGGTCGCTGGTCGGCTCCCCGTGGACGCGGCTCAGGTGGTTCATGACCGTTTCCTCATTGTaGCAAAGTCCATGGGATGTT +
Preference number: 4 (lower is better)
Translates to: MSLRSLVGSPWTRLRWFMTVSSL*QSPWDV
Trigger: AACATCCCATGGACTTTGCCACAATGAGGAAACGGT...CATGAACCACCTGAGCCGCGTCCACGGGGAGCCGACCAGCGACCTCAGTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAGCGTCGTCGGGGTGTaGCCTTCCTCCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQASVVGV*PSSPGR
Trigger: GCGGCCTGGGGAGGAAGGCCACACCCCGACGACGCT...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAAGTTCTTGGCAGACTTTaGGGGGCTTACACTTTTCGA +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQVLGRL*GAYTFR
Trigger: TCGAAAAGTGTAAGCCCCCCAAAGTCTGCCAAGAAC...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACACCTTGCGCTTCTCATTaGCGATCTCCAGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATPCASH*RSPARH
Trigger: ATGCCTGGCTGGAGATCGTCAATGAGAAGCGCAAGG...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CGGCTCAGGTGGTTCATGGCGCGGTCAAAAGCGATCCGCACGGCCTTCCGGATGAGGTTTTTATACCCTTaGGCTTCTAACCGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RLRWFMARSKAIRTAFRMRFLYP*ASNRFL
Trigger: GAGGAAACGGTTAGAAGCTCAAGGGTATAAAAACCT...CATCCGGAAGGCCGTGCGGATCGCTTTTGACCGCGCCATGAACCACCTGAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR TCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCAGAACAACACCTCCCTaGTCGCGCAGCCTCACCGCG +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTRTTPP*SRSLTA
Trigger: CGCGGTGAGGCTGCGCGATCAGGGAGGTGTTGTTCT...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCACATATCAAAGAAAGTaGCGCCAGCAGCACGGCCTG +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRATYQRK*RQQHGL
Trigger: CAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGT...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGATTGGTGATCTGCAAGTaGTGTACACAGCATAACTTT +
Preference number: 4 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRLVICK*CTQHNF
Trigger: AAAGTTATGCTGTGTACATCACTTGCAGATCACCAA...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCAAAATACTGATCCTGTaGAAGCGCCCTTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIKILIL*KRPSIS
Trigger: AGAAATTGAAGGGCGCTTGCACAGGATCAGTATTTT...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCGCCGTTGGTGAGACCTaGGTCCAGGCGCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTAVGET*VQALSW
Trigger: CCAGGAAAGCGCCTGGACGCAGGTCTCACCAACGGC...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCGCACAAGAGCCGGTTTaGCCCGCCCACATTTGGGCG +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTAQEPV*PAHIWA
Trigger: CGCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGC...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACAGGCATGCTCAGTaGCTACCTGGTCCTATCGGA +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATDRHAQ*LPGPIG
Trigger: TCCGATAGGACCAGGTAGCCACTGAGCATGCCTGTC...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR CCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGCTGCGCAAATATCCTaGCGGGGTCCTTGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATAAQIS*RGPCLA
Trigger: TGCAAGACAAGGACCCCGCCAGGATATTTGCGCAGC...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCCACTCACTCATCTCTTaGGCAGTGAGGTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRAHSLIS*AVRSSS
Trigger: GGAAGATGACCTCACTGCTCAAGAGATGAGTGAGTG...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTTTGGTGATCTGCAAGTaGTGTACACAGCATAACTTT +
Preference number: 4 (lower is better)
Translates to: KKVTPAARPGDVRQTHWALVICK*CTQHNF
Trigger: AAAGTTATGCTGTGTACATCACTTGCAGATCACCAA...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GTGGTTCATGGCGCGGTCAAAAGCGATCCGCACGGCCTTCCGGATGCTGGAATTGCGGAGTGTTTTTGGTaGTCTGCAAGTGATGTACAC +
Preference number: 4 (lower is better)
Translates to: VVHGAVKSDPHGLPDAGIAECFW*SASDVH
Trigger: GTGTACATCACTTGCAGATCACCAAAAACACTCCGC...AATTCCAGCATCCGGAAGGCCGTGCGGATCGCTTTTGACCGCGCCATGAACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR GCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAATTTCCTTGTTGCTGTTaGACTCACTCATCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQFPCCC*THSSLE
Trigger: CTCAAGAGATGAGTGAGTGCAACAGCAACAAGGAAA...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCCCTCTTCCAAGCCGATaGTGTCCACCTCGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQAPLPSR*CPPRAG
Trigger: CCCGGCGCGAGGTGGACAGCATCGGCTTGGAAGAGG...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCGAAAGGCCGCCGCGGTaGCGCAGCAGGCCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSERPPR*RSRPLR
Trigger: CCTGAGCGGCCTGCTGCGGCACCGCGGCGGCCTTTC...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCAGGGGCTGGCTGTGCTaGTGGCTCAGCTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTRGWLC*WLSLFR
Trigger: CCGAAACAAGCTGAGCCAGCAGCACAGCCAGCCCCT...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCCGGTCCTCCAGCGTGTaGCGTCGCACAAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQARSSSV*RRTRAG
Trigger: ACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCG...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCTGCTCGCCCTGCTTCTaGTTCTCGCAGTGCGACTCC +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTCSPCF*FSQCDS
Trigger: GGAGTCGCACTGCGAGAACCAGAAGCAGGGCGAGCA...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCGGCAAAGCCGACCTCTaGGATCCACAGGGCACACAC +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTGKADL*DPQGTH
Trigger: GTGTGTGCCCTGTGGATCCCAGAGGTCGGCTTTGCC...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCGCTGAGACTGCAGGCTaGACTGCAGCCGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQAAETAG*TAAAAA
Trigger: TGCTGCGGCGGCTGCAGTCCAGCCTGCAGTCTCAGC...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGGGACAAGACCCGCGCTaGCGGCCGGGCCGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKGQDPR*RPGRQS
Trigger: TGACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCC...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGGGCGCGGGTGGGCTCTaGAGGGCGTCCGCTTACCAG +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKGAGGL*RASAYQ
Trigger: CTGGTAAGCGGACGCCCTCCAGAGCCCACCCGCGCC...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAAACTCTGTTGTTTTTGTaGCGCTTAGTTCTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQTLLFL*RLVLKQ
Trigger: CTGCTTAAGAACTAAGCGTCACAAAAACAACAGAGT...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGAAAACCACAAAAGCATaGTTGGACAGATCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWKTTKA*LDRSSS
Trigger: TGAGCTAGATCTGTCCAAGCATGCTTTTGTGGTTTT...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR GCA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACCTTTTCCTTGGCTaGAGAAGAGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: KLHIKESDASSTAWGRATDLFLG*RRVSNL
Trigger: GAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTC...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCTGGCCGACTTCGGCTaGGATCCTGGCCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKLADFG*DPGRLG
Trigger: GCCAAGGCGGCCAGGATCGCAGCCGAAGTCGGCCAG...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCTGGAGATCCACATGCTaGTCTGGCCGACTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTWRSTC*SGRLRL
Trigger: CAGCCGAAGTCGGCCAGAGCAGCATGTGGATCTCCA...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGCAATGCAATGCATTCTaGTCCCAAGCCAAGTTGAAT +
Preference number: 4 (lower is better)
Translates to: IKESDASSTAWGRATDALQCNAF*SQAKLN
Trigger: ATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTG...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCGGCTCAGGTGGTTCATaGCGCGGTCAAAAGCGATCC +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTGSGGS*RGQKRS
Trigger: GGATCGCTTTTGACCGCGCCATGAACCACCTGAGCC...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCTGCTGTGAGCTTCGCTaGGACTGCAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQACCELR*DCRLDC
Trigger: GCAGTCCAGCCTGCAGTCTCAGCGAAGCTCACAGCA...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCAGCTGGTCCAGCACTaGGCGCAGCAGCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKQLVQH*AQQHRQ
Trigger: CTGACGGTGCTGCTGCGCTCAGTGCTGGACCAGCTG...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCTCAGGAACTCAAACATaGTCTGCGACACGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTSGTQT*SATRRG
Trigger: TCCCCGCCGTGTCGCAGAGCATGTTTGAGTTCCTGA...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCTTCTGGTTCTCGCAGTaGGACTCCTTCTCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTFWFSQ*DSFSKR
Trigger: CCGCTTCGAGAAGGAGTCGCACTGCGAGAACCAGAA...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCGGCAGGGGCTGGCTGTaGTGCTGGCTCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQAGRGWL*CWLSLF
Trigger: AAACAAGCTGAGCCAGCAGCACAGCCAGCCCCTGCC...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAGGAGATCAGCTCACTaGGGTCCTCCAGCGTGTGCC +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQARRSAH*GPPACA
Trigger: GGCACACGCTGGAGGACCGCAGTGAGCTGATCTCCT...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCTGCTCGCCCTGCTTCTaGTTCTCGCAGTGCGACTCC +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQACSPCF*FSQCDS
Trigger: GGAGTCGCACTGCGAGAACCAGAAGCAGGGCGAGCA...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCGCTGCGCAAATATCCTaGCGGGGTCCTTGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTAAQIS*RGPCLA
Trigger: TGCAAGACAAGGACCCCGCCAGGATATTTGCGCAGC...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCTCCTCCAGGCCCAGGTaGGCTCTGTTGGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSSSRPR*ALLAGS
Trigger: GGACCCCGCCAACAGAGCCCACCTGGGCCTGGAGGA...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGATGGTGACGCCGTTGTaGTGGCCAGGCACACGGGGC +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKMVTPL*WPGTRG
Trigger: GCCCCGTGTGCCTGGCCACCACAACGGCGTCACCAT...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGTCCTGGACAGCCGCTTaGGCAGCCAGTAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKSWTAA*AASSCG
Trigger: CCCACAGCTACTGGCTGCTCAAGCGGCTGTCCAGGA...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCAGGTTTTTATACCCTTaGGCTTCTAACCGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRARFLYP*ASNRFL
Trigger: GAGGAAACGGTTAGAAGCTCAAGGGTATAAAAACCT...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCCATGGGGAAGAAGGATaGCTCGCTGCAGAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQAHGEEG*LAAEPR
Trigger: TCGAGGCTCTGCAGCGAGGCATCCTTCTTCCCCATG...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCACCTCGCGCCGGGCCTaGCTCAGAACAACACCTCCC +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSTSRRA*LRTTPP
Trigger: GGGAGGTGTTGTTCTGAGGCAGGCCCGGCGCGAGGT...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCGCAGCTTTGCCCGCTTaGTCCGGGAGCCGCTGGACT +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSAALPA*SGSRWT
Trigger: AGTCCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGC...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCCTTTTTGAGCAGCTTTaGCCGCTTGCTCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQALFEQL*PLAPGA
Trigger: GGCTCCCGGAGCAAGCGGGCAAAGCTGCTCAAAAAG...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCGACTTGGTCTGCATGTaGTCCCCAATCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTDLVCM*SPIFST
Trigger: CGTGCTGAAGATTGGGGAGCACATGCAGACCAAGTC...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCTCCGGGTGCAGCCTaGAGGCGTGTGGACATCACA +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKPPGAA*RRVDIT
Trigger: TGTGATGTCCACACGCCTCCAGGCTGCACCCGGAGG...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCCCGCGACCTTTTCCTTaGCTGCAGAAGAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTPRPFP*LQKSLQ
Trigger: TTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGG...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCTTCGGCTGCGATCCTaGCCGCCTTGGCGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKLRLRS*PPWRSS
Trigger: GGAACTACGCCAAGGCGGCCAGGATCGCAGCCGAAG...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCGGGGATCAAAAATACTaGTCCTGTGCAAGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTGDQKY*SCASAL
Trigger: AAGGGCGCTTGCACAGGATCAGTATTTTTGATCCCC...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCACTCTGTTGTTTTTGTaGCGCTTAGTTCTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: KHVQLINTMDKTRAGGRATLLFL*RLVLKQ
Trigger: CTGCTTAAGAACTAAGCGTCACAAAAACAACAGAGT...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCCCTTGCGCTTCTCATTaGCGATCTCCAGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQAPCASH*RSPARH
Trigger: ATGCCTGGCTGGAGATCGTCAATGAGAAGCGCAAGG...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCAGAACAACACCTCCCTaGTCGCGCAGCCTCACCGCG +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSRTTPP*SRSLTA
Trigger: CGCGGTGAGGCTGCGCGATCAGGGAGGTGTTGTTCT...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGAGGGGCTGGCTGTGCTaGTGGCTCAGCTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKRGWLC*WLSLFR
Trigger: CCGAAACAAGCTGAGCCAGCAGCACAGCCAGCCCCT...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCGCAGAGCGGGCTGTTaGTGGAGGAGATGCTGGACT +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKRRAGC*WRRCWT
Trigger: AGTCCAGCATCTCCTCCAGCAACAGCCCGCTCTGCG...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCAGTTCCCATTCTCGATaGAGGAGATCAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTSSHSR*RRSAHC
Trigger: GCAGTGAGCTGATCTCCTGCATCGAGAATGGGAACT...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCGGGGTCGATGATCAGTaGCGGGTAGGAGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSGVDDQ*RVGGVA
Trigger: GGCTACCCCTCCTACCCGGCACTGATCATCGACCCC...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGAGGCACCACCCTTGTTaGGGCACAGCACACAGTCGG +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKRHHPC*GTAHSR
Trigger: CCGACTGTGTGCTGTGCCCCAACAAGGGTGGTGCCT...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATAGCGTCGTCGGGGTGTaGCCTTCCTCCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYSVVGV*PSSPGR
Trigger: GCGGCCTGGGGAGGAAGGCCACACCCCGACGACGCT...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCGCTTCTCATCAGACTTaGTCTGCATGTGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTASHQT*SACAPQ
Trigger: TTGGGGAGCACATGCAGACCAAGTCTGATGAGAAGC...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCGGGCAATTTCCTTTTTaGGCAGCTTTGCCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQAGQFPF*AALPAC
Trigger: GCAAGCGGGCAAAGCTGCTCAAAAAGGAAATTGCCC...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCCTTACCAGTGCGCTCTaGGTGCAAGCGCTATGTGAT +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQALTSAL*VQALCD
Trigger: ATCACATAGCGCTTGCACTCAGAGCGCACTGGTAAG...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGAACTCAAACATGCTCTaGGACACGGCGGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKNSNML*DTAGTQ
Trigger: CTGCGTCCCCGCCGTGTCGCAGAGCATGTTTGAGTT...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGAGCTCCATGGCGACCTaGTCCACCTTCACCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKSSMAT*STFTCS
Trigger: TGAGCAGGTGAAGGTGGAGCAGGTCGCCATGGAGCT...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCGCAGAGCGGGCTGTTaGTGGAGGAGATGCTGGACT +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSRRAGC*WRRCWT
Trigger: AGTCCAGCATCTCCTCCAGCAACAGCCCGCTCTGCG...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGGCACGGCCTTCCGGATaGTGGAATTCCTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKARPSG*WNSSLP
Trigger: TGGAAGGGAGGAATTCCAGCATCCGGAAGGCCGTGC...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATACACAGGAGGCCTCCTaGGGGCGGACGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYTQEAS*GRTEGC
Trigger: ACAGCCCTCCGTCCGCCCCCAGGAGGCCTCCTGTGT...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTACACAGGAGGCCTCCTaGGGGCGGACGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCTQEAS*GRTEGC
Trigger: ACAGCCCTCCGTCCGCCCCCAGGAGGCCTCCTGTGT...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTGCCAGCAGCACGGCCTaGGGACGTGCGACAGACGCA +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCASSTA*GRATDA
Trigger: TGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGC...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGATCACGTTGCTGTTCTaGCACTCCCCGTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKITLLF*HSPSMQ
Trigger: CTGCATGGACGGGGAGTGTCAGAACAGCAACGTGAT...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCAACTCAAACATGCTCTaGGACACGGCGGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSNSNML*DTAGTQ
Trigger: CTGCGTCCCCGCCGTGTCGCAGAGCATGTTTGAGTT...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGTCAGGAACTCAAACATaGTCTGCGACACGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKSGTQT*SATRRG
Trigger: TCCCCGCCGTGTCGCAGAGCATGTTTGAGTTCCTGA...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCTCGTCGATCAGAGACTaGTGCTCGCCCTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSSSIRD*CSPCFW
Trigger: CCAGAAGCAGGGCGAGCAGCAGTCTCTGATCGACGA...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTGCAGCTTTGCCCGCTTaGTCCGGGAGCCGCTGGACT +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCAALPA*SGSRWT
Trigger: AGTCCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGC...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCTTTTTGAGCAGCTTTaGCCGCTTGCTCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSLFEQL*PLAPGA
Trigger: GGCTCCCGGAGCAAGCGGGCAAAGCTGCTCAAAAAG...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCGCACGGCCTTCCGGATaGTGGAATTCCTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSARPSG*WNSSLP
Trigger: TGGAAGGGAGGAATTCCAGCATCCGGAAGGCCGTGC...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGCGTGCCGTGGGCGCTaGGGAGGGCCTCGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYACRGR*GGPRFS
Trigger: AGAAAAACGAGGCCCTCCCCAGCGCCCACGGCACGC...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTGTGACGCCGTTGTGGTaGCCAGGCACACGGGGCATC +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCVTPLW*PGTRGI
Trigger: GATGCCCCGTGTGCCTGGCCACCACAACGGCGTCAC...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCCTTGCGCTTCTCATTaGCGATCTCCAGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSPCASH*RSPARH
Trigger: ATGCCTGGCTGGAGATCGTCAATGAGAAGCGCAAGG...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATCCCCGTCCATGCAGATaGAGCACACGGCGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYPRPCR*STRRPR
Trigger: ACGAGGACGCCGTGTGCTGCATCTGCATGGACGGGG...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCTGCTCCACCTTCACCTaGTCACGCTTGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSCSTFT*SRLSFS
Trigger: GGAGAAGCTCAAGCGTGAGCAGGTGAAGGTGGAGCA...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTGCACAAGAGCCGGTTTaGCCCGCCCACATTTGGGCG +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCAQEPV*PAHIWA
Trigger: CGCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGC...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCGTGATCCAAATAATCTaGTACCTCCTTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTVIQII*YLLQTH
Trigger: GTGAGTCTGAAGGAGGTACCAGATTATTTGGATCAC...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTCCAGGTGGGCTCTGTTaGCGGGGTCCAGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCPGGLC*RGPATC
Trigger: ACAGGTTGCTGGACCCCGCCAACAGAGCCCACCTGG...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATCTTCGGCTGCGATCCTaGCCGCCTTGGCGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYLRLRS*PPWRSS
Trigger: GGAACTACGCCAAGGCGGCCAGGATCGCAGCCGAAG...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCTGGGTTGAGTTCTACTaGTTTGAGGGTTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQAWVEFY*FEGWWF
Trigger: GAACCACCAACCCTCAAACCAGTAGAACTCAACCCA...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTCAGTCAATGTCACTaGGGTCGCTGGTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYVSQCH*GRWSAP
Trigger: GGGAGCCGACCAGCGACCTCAGTGACATTGACTGAC...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTAGGGGCTGGCTGTGCTaGTGGCTCAGCTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCRGWLC*WLSLFR
Trigger: CCGAAACAAGCTGAGCCAGCAGCACAGCCAGCCCCT...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGGACCTTTTCCTTGGCTaGAGAAGAGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKDLFLG*RRVSNL
Trigger: GAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTC...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTTGCTGGAGGAGATGCTaGACTCGGAGGCACAGCGTC +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCCWRRC*TRRHSV
Trigger: GACGCTGTGCCTCCGAGTCCAGCATCTCCTCCAGCA...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCGCGCCCAGACGGAGATaGGTTCCTAGAAAACTTGGA +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSAPRRR*VPRKLG
Trigger: TCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGC...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATCTTTTTGAGCAGCTTTaGCCGCTTGCTCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYLFEQL*PLAPGA
Trigger: GGCTCCCGGAGCAAGCGGGCAAAGCTGCTCAAAAAG...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCGACCTTTTCCTTGGCTaGAGAAGAGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSDLFLG*RRVSNL
Trigger: GAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTC...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATTGTTGCTGGAGGAGATaGTGGACTCGGAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYCCWRR*WTRRHS
Trigger: GCTGTGCCTCCGAGTCCAGCATCTCCTCCAGCAACA...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTCGATCCTGGCCGCCTTaGCGTAGTTCCCATTCTCGA +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCRSWPP*RSSHSR
Trigger: TCGAGAATGGGAACTACGCCAAGGCGGCCAGGATCG...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATCGATCCTGGCCGCCTTaGCGTAGTTCCCATTCTCGA +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYRSWPP*RSSHSR
Trigger: TCGAGAATGGGAACTACGCCAAGGCGGCCAGGATCG...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATAGGCGGCGGCATCAGTaGAGATCCACATGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYRRRHQ*RSTCCS
Trigger: AGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCT...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTTGGACGCGGCTCAGGTaGTTCATGGCGCGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCWTRLR*FMARSK
Trigger: TTTTGACCGCGCCATGAACCACCTGAGCCGCGTCCA...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGTGGGTTGAGTTCTACTaGTTTGAGGGTTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKWVEFY*FEGWWF
Trigger: GAACCACCAACCCTCAAACCAGTAGAACTCAACCCA...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTAGTAAGCGGTCTTTCTaGCGGAGAAGGTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCSKRSF*RRRWCH
Trigger: GTGGCACCACCTTCTCCGTCAGAAAGACCGCTTACT...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAAATACTGATCCTGTaGAAGCGCCCTTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: STHRPESFIQCNAFCSQAKILIL*KRPSIS
Trigger: AGAAATTGAAGGGCGCTTGCACAGGATCAGTATTTT...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATTTCTGGTTCTCGCAGTaGGACTCCTTCTCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYFWFSQ*DSFSKR
Trigger: CCGCTTCGAGAAGGAGTCGCACTGCGAGAACCAGAA...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTTCGATCAGAGACTGCTaGTCGCCCTGCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCSIRDC*SPCFWF
Trigger: GAACCAGAAGCAGGGCGAGCAGCAGTCTCTGATCGA...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATTGCTCCACCTTCACCTaGTCACGCTTGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYCSTFT*SRLSFS
Trigger: GGAGAAGCTCAAGCGTGAGCAGGTGAAGGTGGAGCA...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTCGGCCTTCCGGATGCTaGAATTCCTCCCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCRPSGC*NSSLPS
Trigger: TGATGGAAGGGAGGAATTCCAGCATCCGGAAGGCCG...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGGGCAATTTCCTTTTTaGGCAGCTTTGCCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYGQFPF*AALPAC
Trigger: GCAAGCGGGCAAAGCTGCTCAAAAAGGAAATTGCCC...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTGGGCAATTTCCTTTTTaGGCAGCTTTGCCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCGQFPF*AALPAC
Trigger: GCAAGCGGGCAAAGCTGCTCAAAAAGGAAATTGCCC...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATACATATCAAAGAAAGTaGCGCCAGCAGCACGGCCTG +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYTYQRK*RQQHGL
Trigger: CAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGT...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGTTTCCTTGTTGCTGTTaGACTCACTCATCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKFPCCC*THSSLE
Trigger: CTCAAGAGATGAGTGAGTGCAACAGCAACAAGGAAA...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCGGTCATCTTCCAATATaGTCTCCAGGGGATCAAAAA +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSGHLPI*SPGDQK
Trigger: TTTTTGATCCCCTGGAGATCATATTGGAAGATGACC...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATCACTCACTCATCTCTTaGGCAGTGAGGTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYHSLIS*AVRSSS
Trigger: GGAAGATGACCTCACTGCTCAAGAGATGAGTGAGTG...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTATTTTCTCTCTGCTGTaGGCTTCGCTGAGACTGCAG +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCIFSLL*ASLRLQ
Trigger: CTGCAGTCTCAGCGAAGCTCACAGCAGAGAGAAAAT...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCAGGTTTTTATACCCTTaGGCTTCTAACCGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSRFLYP*ASNRFL
Trigger: GAGGAAACGGTTAGAAGCTCAAGGGTATAAAAACCT...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGTTGGTGATCTGCAAGTaGTGTACACAGCATAACTTT +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKLVICK*CTQHNF
Trigger: AAAGTTATGCTGTGTACATCACTTGCAGATCACCAA...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CCA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGAAGTTTACTCTGCTCTaGGTTGAGTTCTACTGGTTT +
Preference number: 4 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKKFTLL*VEFYWF
Trigger: AAACCAGTAGAACTCAACCCAGAGCAGAGTAAACTT...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCTTGGTGATCTGCAAGTaGTGTACACAGCATAACTTT +
Preference number: 4 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSLVICK*CTQHNF
Trigger: AAAGTTATGCTGTGTACATCACTTGCAGATCACCAA...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGCGGAGTGTTTTTGGTaGTCTGCAAGTGATGTACAC +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYAECFW*SASDVH
Trigger: GTGTACATCACTTGCAGATCACCAAAAACACTCCGC...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
3UTR CAA 72 bp TTGTCTATAGTTTCGTCAATACCAAGGGGAACCATTTaGGACTTAGGAAGCCACTGCCAACTTCTCTTATTA +
Preference number: 4 (lower is better)
Translates to: LSIVSSIPRGTI*DLGSHCQLLLL
Trigger: TAATAAGAGAAGTTGGCAGTGGCTTCCTAAGTCCAAAATGGTTCCCCTTGGTATTGACGAAACTATAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR TCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTAGGTTTTTATACCCTTaGGCTTCTAACCGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCRFLYP*ASNRFL
Trigger: GAGGAAACGGTTAGAAGCTCAAGGGTATAAAAACCT...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATAGGTTTTTATACCCTTaGGCTTCTAACCGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYRFLYP*ASNRFL
Trigger: GAGGAAACGGTTAGAAGCTCAAGGGTATAAAAACCT...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTCAATGCAATGCATTCTaGTCCCAAGCCAAGTTGAAT +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCQCNAF*SQAKLN
Trigger: ATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTG...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATACTCTGTTGTTTTTGTaGCGCTTAGTTCTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYTLLFL*RLVLKQ
Trigger: CTGCTTAAGAACTAAGCGTCACAAAAACAACAGAGT...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR TCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTTTGGTGATCTGCAAGTaGTGTACACAGCATAACTTT +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCLVICK*CTQHNF
Trigger: AAAGTTATGCTGTGTACATCACTTGCAGATCACCAA...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR GCA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTTTGAAAAGTTTACTCTaGTCTGGGTTGAGTTCTACT +
Preference number: 4 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCLKSLL*SGLSST
Trigger: AGTAGAACTCAACCCAGAGCAGAGTAAACTTTTCAA...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS CCA 90 bp GCCTCCTGGGGGCGGACGGAGGGCTGTACTCCACGATGCGCACCTTaGGCTCCGGGAGGGCACTGGCCGAGGCCGGCGTGCCGTGGGCGC +
Preference number: 5 (lower is better)
Translates to: ASWGRTEGCTPRCAP*APGGHWPRPACRGR
Trigger: GCGCCCACGGCACGCCGGCCTCGGCCAGTGCCCTCCCGGAGCCCAAGGTGCGCATCGTGGAGTACAGCCCTCCGTCCGCCCCCAGGAGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGTCCACGATGCGCACCTaGGGCTCCGGGAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: RWAGRRERGHTHRRSRAASTMRT*GSGRAL
Trigger: CAGTGCCCTCCCGGAGCCCAAGGTGCGCATCGTGGA...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGATCCACGATGCGCACCTaGGGCTCCGGGAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGSTMRT*GSGRAL
Trigger: CAGTGCCCTCCCGGAGCCCAAGGTGCGCATCGTGGA...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGCGCACAAGAGCCGGTTaGCCCCGCCCACATTTGGGC +
Preference number: 5 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRRTRAG*PRPHLG
Trigger: GCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGCG...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS GCA 90 bp ACACAGGAGGCCTCCTGGGGGCGGACGGAGGGCTGTACTCCACGATaGGCACCTTGGGCTCCGGGAGGGCACTGGCCGAGGCCGGCGTGC +
Preference number: 5 (lower is better)
Translates to: TQEASWGRTEGCTPR*APWAPGGHWPRPAC
Trigger: GCACGCCGGCCTCGGCCAGTGCCCTCCCGGAGCCCAAGGTGCGCATCGTGGAGTACAGCCCTCCGTCCGCCCCCAGGAGGCCTCCTGTGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS CCA 90 bp CCGCGGAGGCCGCCGCCGCCGGCACATCGCCACTACTGGCGCGGGTaGGCTCTGGAGGGCGTCCGCTTACCAGTGCGCTCTGAGTGCAAG +
Preference number: 5 (lower is better)
Translates to: PRRPPPPAHRHYWRG*ALEGVRLPVRSECK
Trigger: CTTGCACTCAGAGCGCACTGGTAAGCGGACGCCCTCCAGAGCCCACCCGCGCCAGTAGTGGCGATGTGCCGGCGGCGGCGGCCTCCGCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCTCCACGATGCGCACCTaGGGCTCCGGGAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: PAARPGDVRQTHWAARTCSTMRT*GSGRAL
Trigger: CAGTGCCCTCCCGGAGCCCAAGGTGCGCATCGTGGA...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGTTCACCTGCTCACGCTaGAGCTTCTCCCGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRFTCSR*SFSRLR
Trigger: GCGCAAGCGGGAGAAGCTCAAGCGTGAGCAGGTGAA...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGATCCTGGCGGGGTCCTaGTCTTGCAGCTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAILAGS*SCSWSS
Trigger: GCTGGACCAGCTGCAAGACAAGGACCCCGCCAGGAT...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTAGCAGCTTTGCCCGCTaGCTCCGGGAGCCGCTGGAC +
Preference number: 5 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRSSFAR*LREPLD
Trigger: GTCCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGCT...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGTCGCAGAGCGGGCTGTaGCTGGAGGAGATGCTGGAC +
Preference number: 5 (lower is better)
Translates to: RWAGRRERGHTHRRSRAASQSGL*LEEMLD
Trigger: GTCCAGCATCTCCTCCAGCAACAGCCCGCTCTGCGA...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGGCACACGGGGCATCTaGGGGTCGATGATCAGTGCC +
Preference number: 5 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAGTRGI*GSMISA
Trigger: GGCACTGATCATCGACCCCAAGATGCCCCGTGTGCC...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGGGCACACGGGGCATCTaGGGGTCGATGATCAGTGCC +
Preference number: 5 (lower is better)
Translates to: WAGRRERGHTHRRSRAAEGTRGI*GSMISA
Trigger: GGCACTGATCATCGACCCCAAGATGCCCCGTGTGCC...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGTCTGTTTACATCGCTaGCTGGCTCCGCCACCGCGG +
Preference number: 5 (lower is better)
Translates to: RWAGRRERGHTHRRSRAAVCLHR*LAPPPR
Trigger: CCGCGGTGGCGGAGCCAGCAAGCGATGTAAACAGAC...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS GCA 90 bp CAGGAGAAAGGCCGCCGCGGTGCCGCAGCAGGCCGCTCAGGCAGGTaGATCCCCGAGGCCTCTTCCAAGCCGATGCTGTCCACCTCGCGC +
Preference number: 5 (lower is better)
Translates to: QEKGRRGAAAGRSGR*IPEASSKPMLSTSR
Trigger: GCGCGAGGTGGACAGCATCGGCTTGGAAGAGGCCTCGGGGATGCACCTGCCTGAGCGGCCTGCTGCGGCACCGCGGCGGCCTTTCTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CCA 90 bp GGCCGCCGCCGCCGGCACATCGCCACTACTGGCGCGGGTGGGCTCTaGAGGGCGTCCGCTTACCAGTGCGCTCTGAGTGCAAGCGCTATG +
Preference number: 5 (lower is better)
Translates to: GRRRRHIATTGAGGL*RASAYQCALSASAM
Trigger: CATAGCGCTTGCACTCAGAGCGCACTGGTAAGCGGACGCCCTCCAGAGCCCACCCGCGCCAGTAGTGGCGATGTGCCGGCGGCGGCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGTCATACTCCACCTCGTaGTCCAGTTCCTCGGCCGAC +
Preference number: 5 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRSYSTS*SSSSAD
Trigger: GTCGGCCGAGGAACTGGACAACGAGGTGGAGTATGA...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTCGCACAAGAGCCGGTTaGCCCCGCCCACATTTGGGC +
Preference number: 5 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRRTRAG*PRPHLG
Trigger: GCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGCG...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACGGGATGGTGACGCCGTaGTGGTGGCCAGGCACACGG +
Preference number: 5 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHGMVTP*WWPGTR
Trigger: CCGTGTGCCTGGCCACCACAACGGCGTCACCATCCC...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGGGGATGGTGACGCCGTaGTGGTGGCCAGGCACACGG +
Preference number: 5 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTEGMVTP*WWPGTR
Trigger: CCGTGTGCCTGGCCACCACAACGGCGTCACCATCCC...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS GCA 90 bp CTCAGGCGAGAGGGAGAGGAAGCCATCGGGCAGAGACAGACCCGGTaGTCAGTGCCCGTCCCACAGTCCCGGCGAGGGGGCTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: LRREGEEAIGQRQTR*SVPVPQSRRGGWAV
Trigger: CACTGCCCAGCCCCCTCGCCGGGACTGTGGGACGGGCACTGAGCACCGGGTCTGTCTCTGCCCGATGGCTTCCTCTCCCTCTCGCCTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479985.1
CDS-3UTR CAA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGTCATACTCCACCTCGTaGTCCAGTTCCTCGGCCGAC +
Preference number: 5 (lower is better)
Translates to: RWAGRRERGHTHRRSRAASYSTS*SSSSAD
Trigger: GTCGGCCGAGGAACTGGACAACGAGGTGGAGTATGA...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGTCCGCGACCTTTTCCTaGGCTGCAGAAGAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRSATFS*AAEESP
Trigger: TGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGA...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACCGCACAAGAGCCGGTTaGCCCCGCCCACATTTGGGC +
Preference number: 5 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHRTRAG*PRPHLG
Trigger: GCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGCG...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGCACAAGAGCCGGTTaGCCCCGCCCACATTTGGGC +
Preference number: 5 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRRTRAG*PRPHLG
Trigger: GCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGCG...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS GCA 90 bp GTCCAGCAACCTGTCCACGTCTTCCCAGGAGAAAGGCCGCCGCGGTaGCGCAGCAGGCCGCTCAGGCAGGTGCATCCCCGAGGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VQQPVHVFPGERPPR*RSRPLRQVHPRGLF
Trigger: GAAGAGGCCTCGGGGATGCACCTGCCTGAGCGGCCTGCTGCGGCACCGCGGCGGCCTTTCTCCTGGGAAGACGTGGACAGGTTGCTGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS GCA 90 bp GAGAGGGAGAGGAAGCCATCGGGCAGAGACAGACCCGGTGCTCAGTaGCCGTCCCACAGTCCCGGCGAGGGGGCTGGGCAGTGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: ERERKPSGRDRPGAQ*PSHSPGEGAGQCPS
Trigger: AGAAGGGCACTGCCCAGCCCCCTCGCCGGGACTGTGGGACGGGCACTGAGCACCGGGTCTGTCTCTGCCCGATGGCTTCCTCTCCCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479985.1
CDS CCA 90 bp CAGACCCGGTGCTCAGTGCCCGTCCCACAGTCCCGGCGAGGGGGCTaGGCAGTGCCCTTCTCCACCAGGCAAACAGCGGAGCACTCACCT +
Preference number: 5 (lower is better)
Translates to: QTRCSVPVPQSRRGG*AVPFSTRQTAEHSP
Trigger: AGGTGAGTGCTCCGCTGTTTGCCTGGTGGAGAAGGGCACTGCCCAGCCCCCTCGCCGGGACTGTGGGACGGGCACTGAGCACCGGGTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479985.1
CDS-3UTR CAA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGAATCCTGGCGGGGTCCTaGTCTTGCAGCTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRILAGS*SCSWSS
Trigger: GCTGGACCAGCTGCAAGACAAGGACCCCGCCAGGAT...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAATCCTGGCGGGGTCCTaGTCTTGCAGCTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRILAGS*SCSWSS
Trigger: GCTGGACCAGCTGCAAGACAAGGACCCCGCCAGGAT...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGTCCGCGACCTTTTCCTaGGCTGCAGAAGAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: RWAGRRERGHTHRRSRAASATFS*AAEESP
Trigger: TGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGA...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGCACACGGGGCATCTaGGGGTCGATGATCAGTGCC +
Preference number: 5 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMGTRGI*GSMISA
Trigger: GGCACTGATCATCGACCCCAAGATGCCCCGTGTGCC...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCGGGATGGTGACGCCGTaGTGGTGGCCAGGCACACGG +
Preference number: 5 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAGMVTP*WWPGTR
Trigger: CCGTGTGCCTGGCCACCACAACGGCGTCACCATCCC...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGCTTCTCATCAGACTaGGTCTGCATGTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRSFSSD*VCMCSP
Trigger: TGGGGAGCACATGCAGACCAAGTCTGATGAGAAGCT...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAGTCTGTTTACATCGCTaGCTGGCTCCGCCACCGCGG +
Preference number: 5 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRVCLHR*LAPPPR
Trigger: CCGCGGTGGCGGAGCCAGCAAGCGATGTAAACAGAC...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS GCA 90 bp CAGGCCGCTCAGGCAGGTGCATCCCCGAGGCCTCTTCCAAGCCGATaGTGTCCACCTCGCGCCGGGCCTGCCTCAGAACAACACCTCCCT +
Preference number: 5 (lower is better)
Translates to: QAAQAGASPRPLPSR*CPPRAGPASEQHLP
Trigger: AGGGAGGTGTTGTTCTGAGGCAGGCCCGGCGCGAGGTGGACAGCATCGGCTTGGAAGAGGCCTCGGGGATGCACCTGCCTGAGCGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS GCA 90 bp GGTGCTCAGTGCCCGTCCCACAGTCCCGGCGAGGGGGCTGGGCAGTaGCCTTCTCCACCAGGCAAACAGCGGAGCACTCACCTCCGACTT +
Preference number: 5 (lower is better)
Translates to: GAQCPSHSPGEGAGQ*PSPPGKQRSTHLRL
Trigger: AAGTCGGAGGTGAGTGCTCCGCTGTTTGCCTGGTGGAGAAGGGCACTGCCCAGCCCCCTCGCCGGGACTGTGGGACGGGCACTGAGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479985.1
CDS-3UTR CAA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGAGGGACGCAGTCGCCCTaGCGCTTCTCATTGACGATC +
Preference number: 5 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRGTQSP*RFSLTI
Trigger: GATCGTCAATGAGAAGCGCAAGGGCGACTGCGTCCC...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGTTGAGCTTCTCCCGCTaGCGCAGCAGCTCGATCAGC +
Preference number: 5 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMLSFSR*RSSSIS
Trigger: GCTGATCGAGCTGCTGCGCAAGCGGGAGAAGCTCAA...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp ACGTCCAGGGGTGGGGCCGGGATGGTGACGCCGTTGTGGTGGCCAGGCACACGGTTGAGCTTCTCCCGCTaGCGCAGCAGCTCGATCAGC +
Preference number: 5 (lower is better)
Translates to: TSRGGAGMVTPLWWPGTRLSFSR*RSSSIS
Trigger: GCTGATCGAGCTGCTGCGCAAGCGGGAGAAGCTCAA...CCGTGTGCCTGGCCACCACAACGGCGTCACCATCCCGGCCCCACCCCTGGACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CAA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATTGAGCTTCTCCCGCTaGCGCAGCAGCTCGATCAGC +
Preference number: 5 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRLSFSR*RSSSIS
Trigger: GCTGATCGAGCTGCTGCGCAAGCGGGAGAAGCTCAA...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGTTCACCTGCTCACGCTaGAGCTTCTCCCGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMFTCSR*SFSRLR
Trigger: GCGCAAGCGGGAGAAGCTCAAGCGTGAGCAGGTGAA...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGCTGCTGGCTCAGCTaGTTTCGGAGAAGGGCAATT +
Preference number: 5 (lower is better)
Translates to: WAGRRERGHTHRRSRAAECCWLS*FRRRAI
Trigger: AATTGCCCTTCTCCGAAACAAGCTGAGCCAGCAGCA...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CCA 90 bp CTCACGGGCTGCGCAAATATCCTGGCGGGGTCCTTGTCTTGCAGCTaGTCCAGCACTGAGCGCAGCAGCACCGTCAGCGGGGTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LTGCANILAGSLSCS*SSTERSSTVSGVSR
Trigger: GCGGCTGACCCCGCTGACGGTGCTGCTGCGCTCAGTGCTGGACCAGCTGCAAGACAAGGACCCCGCCAGGATATTTGCGCAGCCCGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGTATCTCTACCATCCTTaGAGCTTGAGCGTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: GGRDDGSGDTPTGGHGQRYLYHP*SLSVGQ
Trigger: CTGACCTACGCTCAAGCTCAAAGGATGGTAGAGATA...CCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGTCATACTCCACCTCGTaGTCCAGTTCCTCGGCCGAC +
Preference number: 5 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTESYSTS*SSSSAD
Trigger: GTCGGCCGAGGAACTGGACAACGAGGTGGAGTATGA...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CAGAGGCTCCAGCACCGAGGCGGCGGCATCAGTGGAGATCCACATGCTGCTCTGAGCAGCTTTGCCCGCTaGCTCCGGGAGCCGCTGGAC +
Preference number: 5 (lower is better)
Translates to: QRLQHRGGGISGDPHAALSSFAR*LREPLD
Trigger: GTCCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGCT...CAGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCTCGGTGCTGGAGCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CAA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGATTGCCCCGCCCACATTaGGGCGCATTAAAGCTCGAG +
Preference number: 5 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRLPRPH*GALKLE
Trigger: CTCGAGCTTTAATGCGCCCAAATGTGGGCGGGGCAA...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACTTGCCCCGCCCACATTaGGGCGCATTAAAGCTCGAG +
Preference number: 5 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHLPRPH*GALKLE
Trigger: CTCGAGCTTTAATGCGCCCAAATGTGGGCGGGGCAA...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCGGCACACGGGGCATCTaGGGGTCGATGATCAGTGCC +
Preference number: 5 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAGTRGI*GSMISA
Trigger: GGCACTGATCATCGACCCCAAGATGCCCCGTGTGCC...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGCACACGGGGCATCTaGGGGTCGATGATCAGTGCC +
Preference number: 5 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFGTRGI*GSMISA
Trigger: GGCACTGATCATCGACCCCAAGATGCCCCGTGTGCC...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp TGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTATCTCTACCATCCTTaGAGCTTGAGCGTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: WAGRRERGHTHRRSRAAEYLYHP*SLSVGQ
Trigger: CTGACCTACGCTCAAGCTCAAAGGATGGTAGAGATA...CTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCTTCACCTGCTCACGCTaGAGCTTCTCCCGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: KVTPAARPGDVRQTHWAAFTCSR*SFSRLR
Trigger: GCGCAAGCGGGAGAAGCTCAAGCGTGAGCAGGTGAA...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCATCCTGGCGGGGTCCTaGTCTTGCAGCTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIILAGS*SCSWSS
Trigger: GCTGGACCAGCTGCAAGACAAGGACCCCGCCAGGAT...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGACTAACCGTTTCCTCATaGTGGCAAAGTCCATGGGAT +
Preference number: 5 (lower is better)
Translates to: VGGTTGAGTHPPAVTGSGLTVSS*WQSPWD
Trigger: ATCCCATGGACTTTGCCACAATGAGGAAACGGTTAG...TCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGAGCAGCTTTGCCCGCTaGCTCCGGGAGCCGCTGGAC +
Preference number: 5 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWSSFAR*LREPLD
Trigger: GTCCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGCT...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTAGCTTCTCATCAGACTaGGTCTGCATGTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRSFSSD*VCMCSP
Trigger: TGGGGAGCACATGCAGACCAAGTCTGATGAGAAGCT...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCAGCTTCTCATCAGACTaGGTCTGCATGTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: PAARPGDVRQTHWAARTCSFSSD*VCMCSP
Trigger: TGGGGAGCACATGCAGACCAAGTCTGATGAGAAGCT...GCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTCCAAGGGGAACCATTTaGGACTTAGGAAGCCACTGC +
Preference number: 5 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRPRGTI*DLGSHC
Trigger: GCAGTGGCTTCCTAAGTCCAAAATGGTTCCCCTTGG...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGATTACCCTGATCTATaGGGCCTGAGAAAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: RWAGRRERGHTHRRSRAADYPDL*GLRKSP
Trigger: AGGGCTTTTTCTCAGGCCCAATAGATCAGGGTAATC...CGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404034.5
CDS-3UTR CAA 90 bp GCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGCTCGCTGTTTTCCTaGTTGCTGTTGCACTCACTC +
Preference number: 5 (lower is better)
Translates to: ATDALGCPDVPTPLTAPRRSLFS*LLLHSL
Trigger: GAGTGAGTGCAACAGCAACAAGGAAAACAGCGAGCG...TCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCTCGATGAACACCGTGTaGGCAAAGCCGACCTCTGGG +
Preference number: 5 (lower is better)
Translates to: KVTPAARPGDVRQTHWAASMNTV*AKPTSG
Trigger: CCCAGAGGTCGGCTTTGCCAACACGGTGTTCATCGA...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTTCACCTGCTCACGCTaGAGCTTCTCCCGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIFTCSR*SFSRLR
Trigger: GCGCAAGCGGGAGAAGCTCAAGCGTGAGCAGGTGAA...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGCTGCTGGCTCAGCTaGTTTCGGAGAAGGGCAATT +
Preference number: 5 (lower is better)
Translates to: DALGCPDVPTPLTAPRRRCCWLS*FRRRAI
Trigger: AATTGCCCTTCTCCGAAACAAGCTGAGCCAGCAGCA...TCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCTTCTCATCAGACTaGGTCTGCATGTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHSFSSD*VCMCSP
Trigger: TGGGGAGCACATGCAGACCAAGTCTGATGAGAAGCT...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS TCA 90 bp CAGGCCAGGCGCACTGGGAGCTCCTCCACTGGTGGCAAGGTGGCCTaGAGCACCAGCATCTCCTGGAGACTGGGAAACCCAGACTGCAGA +
Preference number: 5 (lower is better)
Translates to: QARRTGSSSTGGKVA*STSISWRLGNPDCR
Trigger: TCTGCAGTCTGGGTTTCCCAGTCTCCAGGAGATGCTGGTGCTTCAGGCCACCTTGCCACCAGTGGAGGAGCTCCCAGTGCGCCTGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494833.1
CDS GCA 90 bp TTCAGACTCACGGGCTGCGCAAATATCCTGGCGGGGTCCTTGTCTTaGAGCTGGTCCAGCACTGAGCGCAGCAGCACCGTCAGCGGGGTC +
Preference number: 5 (lower is better)
Translates to: FRLTGCANILAGSLS*SWSSTERSSTVSGV
Trigger: GACCCCGCTGACGGTGCTGCTGCGCTCAGTGCTGGACCAGCTGCAAGACAAGGACCCCGCCAGGATATTTGCGCAGCCCGTGAGTCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS GCA 90 bp TCACCTCCGACTTTAGCTGTGCCAGGGCCCAGCAGACAAAGACGCTaGTCACCACAGGGACACTCAGGTCACCGAGCCCACGGCCCCCAA +
Preference number: 5 (lower is better)
Translates to: SPPTLAVPGPSRQRR*SPQGHSGHRAHGPQ
Trigger: TTGGGGGCCGTGGGCTCGGTGACCTGAGTGTCCCTGTGGTGAGCAGCGTCTTTGTCTGCTGGGCCCTGGCACAGCTAAAGTCGGAGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479985.1
CDS CCA 90 bp TTTCCCAGCATGCAGGCGGTCCCCCAGGAAGTCCACATACAGGGCTaGACCCCACCAGGCACAGAGGCTATGCCCACCAGACAGGCATGC +
Preference number: 5 (lower is better)
Translates to: FPSMQAVPQEVHIQG*TPPGTEAMPTRQAC
Trigger: GCATGCCTGTCTGGTGGGCATAGCCTCTGTGCCTGGTGGGGTCCAGCCCTGTATGTGGACTTCCTGGGGGACCGCCTGCATGCTGGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS CCA 90 bp GCCAACAGGCCAGGCGCACTGGGAGCTCCTCCACTGGTGGCAAGGTaGCCTGAAGCACCAGCATCTCCTGGAGACTGGGAAACCCAGACT +
Preference number: 5 (lower is better)
Translates to: ANRPGALGAPPLVAR*PEAPASPGDWETQT
Trigger: AGTCTGGGTTTCCCAGTCTCCAGGAGATGCTGGTGCTTCAGGCCACCTTGCCACCAGTGGAGGAGCTCCCAGTGCGCCTGGCCTGTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494833.1
CDS-3UTR CAA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGTCGCTGTTTTCCTTGTaGCTGTTGCACTCACTCATC +
Preference number: 5 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRSLFSL*LLHSLI
Trigger: GATGAGTGAGTGCAACAGCAACAAGGAAAACAGCGA...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTCATACTCCACCTCGTaGTCCAGTTCCTCGGCCGAC +
Preference number: 5 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVISYSTS*SSSSAD
Trigger: GTCGGCCGAGGAACTGGACAACGAGGTGGAGTATGA...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAATCGCAGAGCGGGCTGTaGCTGGAGGAGATGCTGGAC +
Preference number: 5 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQSQSGL*LEEMLD
Trigger: GTCCAGCATCTCCTCCAGCAACAGCCCGCTCTGCGA...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGCTAGCTGAGGAGAAGTaGGCTGGGTTTCAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMLAEEK*AGFQCS
Trigger: AGAACACTGAAACCCAGCCAACTTCTCCTCAGCTAG...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS GCA 90 bp TCCACCTCGGAGTCTCCGCATGTGCTCCGCGACCTTTTCCTTGGCTaGAGAAGAGTCTCCAACCTCGGAAGGACTTCCTCGCCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: STSESPHVLRDLFLG*RRVSNLGRTSSPAS
Trigger: GGAGGCGGGCGAGGAAGTCCTTCCGAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCGAGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000404034.5
CDS GCA 90 bp GGCGCTTTCCTGGGGACTCCTCCTCCACCTCGGAGTCTCCGCATGTaGTCCGCGACCTTTTCCTTGGCTGCAGAAGAGTCTCCAACCTCG +
Preference number: 5 (lower is better)
Translates to: GAFLGTPPPPRSLRM*SATFSLAAEESPTS
Trigger: CGAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCGAGGTGGAGGAGGAGTCCCCAGGAAAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CCA 90 bp CTCCTCCACCTCGGAGTCTCCGCATGTGCTCCGCGACCTTTTCCTTaGCTGCAGAAGAGTCTCCAACCTCGGAAGGACTTCCTCGCCCGC +
Preference number: 5 (lower is better)
Translates to: LLHLGVSACAPRPFP*LQKSLQPRKDFLAR
Trigger: GCGGGCGAGGAAGTCCTTCCGAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCGAGGTGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000404034.5
CDS CCA 90 bp CCACTGGTGGCAAGGTGGCCTGAAGCACCAGCATCTCCTGGAGACTaGGAAACCCAGACTGCAGAGACCGCGGCCAGGAACACTCGTCCA +
Preference number: 5 (lower is better)
Translates to: PLVARWPEAPASPGD*ETQTAETAARNTRP
Trigger: TGGACGAGTGTTCCTGGCCGCGGTCTCTGCAGTCTGGGTTTCCCAGTCTCCAGGAGATGCTGGTGCTTCAGGCCACCTTGCCACCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494833.1
CDS-3UTR CAA 90 bp CTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACTATCTCTACCATCCTTaGAGCTTGAGCGTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: LGTCDRRTGLPGRAHPTHYLYHP*SLSVGQ
Trigger: CTGACCTACGCTCAAGCTCAAAGGATGGTAGAGATA...GTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGTCGCTGTTTTCCTTGTaGCTGTTGCACTCACTCATC +
Preference number: 5 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTESLFSL*LLHSLI
Trigger: GATGAGTGAGTGCAACAGCAACAAGGAAAACAGCGA...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCTCCACGATGCGCACCTaGGGCTCCGGGAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: KHVQLINTMDKTRAGGRASTMRT*GSGRAL
Trigger: CAGTGCCCTCCCGGAGCCCAAGGTGCGCATCGTGGA...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTCCCTTGCGCTTCTCATaGACGATCTCCAGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: KKVTPAARPGDVRQTHWAPLRFS*TISSQA
Trigger: TGCCTGGCTGGAGATCGTCAATGAGAAGCGCAAGGG...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAATTGAGCTTCTCCCGCTaGCGCAGCAGCTCGATCAGC +
Preference number: 5 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQLSFSR*RSSSIS
Trigger: GCTGATCGAGCTGCTGCGCAAGCGGGAGAAGCTCAA...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGTTCACCTGCTCACGCTaGAGCTTCTCCCGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWFTCSR*SFSRLR
Trigger: GCGCAAGCGGGAGAAGCTCAAGCGTGAGCAGGTGAA...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGACGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGACGGTGTCCCTGGCATaGTACTTCATGCAGTTATCT +
Preference number: 5 (lower is better)
Translates to: RRTGLPGRAHPTHSAQTETVSLA*YFMQLS
Trigger: AGATAACTGCATGAAGTACAATGCCAGGGACACCGT...CTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGATCCGCGACCTTTTCCTaGGCTGCAGAAGAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRSATFS*AAEESP
Trigger: TGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGA...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTCCGCGACCTTTTCCTaGGCTGCAGAAGAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVISATFS*AAEESP
Trigger: TGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGA...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTTTGCCCCGCCCACATTaGGGCGCATTAAAGCTCGAG +
Preference number: 5 (lower is better)
Translates to: KKVTPAARPGDVRQTHWALPRPH*GALKLE
Trigger: CTCGAGCTTTAATGCGCCCAAATGTGGGCGGGGCAA...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CGCACTGGGCTGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGTTACTCTGCTCTGGGTaGAGTTCTACTGGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: RTGLPGRAHPTHSAQTEMLLCSG*SSTGLR
Trigger: CCTCAAACCAGTAGAACTCAACCCAGAGCAGAGTAA...CATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCAGCCCAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS GCA 90 bp AGCTCGATCAGCAGGCGAGCGCGCTCCAGGTCGTGCCGCAGCCGCTaGCAGTACTTCAGCTTCTCTTTGGCAGCCTTCATCTCCTCATCA +
Preference number: 5 (lower is better)
Translates to: SSISRRARSRSCRSR*QYFSFSLAAFISSS
Trigger: TGATGAGGAGATGAAGGCTGCCAAAGAGAAGCTGAAGTACTGGCAGCGGCTGCGGCACGACCTGGAGCGCGCTCGCCTGCTGATCGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGTTGAGCTTCTCCCGCTaGCGCAGCAGCTCGATCAGC +
Preference number: 5 (lower is better)
Translates to: IKESDASSTAWGRATDALLSFSR*RSSSIS
Trigger: GCTGATCGAGCTGCTGCGCAAGCGGGAGAAGCTCAA...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAATTGCCCCGCCCACATTaGGGCGCATTAAAGCTCGAG +
Preference number: 5 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQLPRPH*GALKLE
Trigger: CTCGAGCTTTAATGCGCCCAAATGTGGGCGGGGCAA...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCCCAAGGGGAACCATTTaGGACTTAGGAAGCCACTGC +
Preference number: 5 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVIPRGTI*DLGSHC
Trigger: GCAGTGGCTTCCTAAGTCCAAAATGGTTCCCCTTGG...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CACCTGCGGGGTTTGAGGTGGGCGGGACGACGGGAGCGGGGACACACCCACCGGTGCTCCCAAGCCAAGTaGAATTTTTATGTGCCTGTA +
Preference number: 5 (lower is better)
Translates to: HLRGLRWAGRRERGHTHRCSQAK*NFYVPV
Trigger: TACAGGCACATAAAAATTCAACTTGGCTTGGGAGCA...CCGGTGGGTGTGTCCCCGCTCCCGTCGTCCCGCCCACCTCAAACCCCGCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCCGGACGTTGCTCCCAAGCCAAGTaGAATTTTTATGTGCCTGTA +
Preference number: 5 (lower is better)
Translates to: RQQHGLGTCDRRTGLPGRCSQAK*NFYVPV
Trigger: TACAGGCACATAAAAATTCAACTTGGCTTGGGAGCA...ACGTCCGGGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCACCACAAAAGCATGCTaGGACAGATCTAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: KVTPAARPGDVRQTHWAATTKAC*DRSSSA
Trigger: TGCTGAGCTAGATCTGTCCAAGCATGCTTTTGTGGT...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR CAA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGATACCATCCTTTGAGCTaGAGCGTAGGTCAGCGTTTC +
Preference number: 5 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRYHPLS*SVGQRF
Trigger: GAAACGCTGACCTACGCTCAAGCTCAAAGGATGGTA...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GACGACGGGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTTATCTCTACCATCCTTaGAGCTTGAGCGTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: DDGSGDTPTGGHGQRSVFYLYHP*SLSVGQ
Trigger: CTGACCTACGCTCAAGCTCAAAGGATGGTAGAGATA...AAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCCCGTCGTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTCGCTCGCTGTTTTCCTaGTTGCTGTTGCACTCACTC +
Preference number: 5 (lower is better)
Translates to: KKVTPAARPGDVRQTHWARSLFS*LLLHSL
Trigger: GAGTGAGTGCAACAGCAACAAGGAAAACAGCGAGCG...AGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGTCGATGAACACCGTGTaGGCAAAGCCGACCTCTGGG +
Preference number: 5 (lower is better)
Translates to: IKESDASSTAWGRATDALSMNTV*AKPTSG
Trigger: CCCAGAGGTCGGCTTTGCCAACACGGTGTTCATCGA...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCTCGCAGAGCGGGCTGTaGCTGGAGGAGATGCTGGAC +
Preference number: 5 (lower is better)
Translates to: KHVQLINTMDKTRAGGRASQSGL*LEEMLD
Trigger: GTCCAGCATCTCCTCCAGCAACAGCCCGCTCTGCGA...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCACGGTGTCCCTGGCATaGTACTTCATGCAGTTATCT +
Preference number: 5 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVITVSLA*YFMQLS
Trigger: AGATAACTGCATGAAGTACAATGCCAGGGACACCGT...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGTGCTGCTGGCTCAGCTaGTTTCGGAGAAGGGCAATT +
Preference number: 5 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWCCWLS*FRRRAI
Trigger: AATTGCCCTTCTCCGAAACAAGCTGAGCCAGCAGCA...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAATGCTGCTGGCTCAGCTaGTTTCGGAGAAGGGCAATT +
Preference number: 5 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQCCWLS*FRRRAI
Trigger: AATTGCCCTTCTCCGAAACAAGCTGAGCCAGCAGCA...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGAGCTTCTCATCAGACTaGGTCTGCATGTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWSFSSD*VCMCSP
Trigger: TGGGGAGCACATGCAGACCAAGTCTGATGAGAAGCT...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGCCAAGGGGAACCATTTaGGACTTAGGAAGCCACTGC +
Preference number: 5 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWPRGTI*DLGSHC
Trigger: GCAGTGGCTTCCTAAGTCCAAAATGGTTCCCCTTGG...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGGCTGCCTCCTTTCCTCCTCATTaGGTAATGATTACCTTCGGG +
Preference number: 5 (lower is better)
Translates to: KVTPAARPGDVRQTHWAASFPPH*VMITFG
Trigger: CCCGAAGGTAATCATTACCAAATGAGGAGGAAAGGA...GGCAGCCCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404760.5
CDS-3UTR CAA 90 bp TGCCCGGACGTGCCCACCCCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGATTACTCTGCTCTGGGTaGAGTTCTACTGGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: CPDVPTPLTAPRRRWVPRLLCSG*SSTGLR
Trigger: CCTCAAACCAGTAGAACTCAACCCAGAGCAGAGTAA...TCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGGGGTGGGCACGTCCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS CCA 90 bp CACGCCCTTCTGCTTACAGAGGTAGCATGTCAGTTTCCACCGGGCTaGAGGGATGTTCCTCACCCCATCGATGGGCTCGATGAACACCGT +
Preference number: 5 (lower is better)
Translates to: HALLLTEVACQFPPG*RDVPHPIDGLDEHR
Trigger: ACGGTGTTCATCGAGCCCATCGATGGGGTGAGGAACATCCCTCCAGCCCGGTGGAAACTGACATGCTACCTCTGTAAGCAGAAGGGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCCCCTTGCGCTTCTCATaGACGATCTCCAGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: KHVQLINTMDKTRAGGRAPLRFS*TISSQA
Trigger: TGCCTGGCTGGAGATCGTCAATGAGAAGCGCAAGGG...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGGGACGCAGTCGCCCTaGCGCTTCTCATTGACGATC +
Preference number: 5 (lower is better)
Translates to: KLHIKESDASSTAWGRATGTQSP*RFSLTI
Trigger: GATCGTCAATGAGAAGCGCAAGGGCGACTGCGTCCC...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CAGCACCGAGGCGGCGGCATCAGTGGAGATCCACATGCTGCTCTGGCCGACTTCACGGTGTCCCTGGCATaGTACTTCATGCAGTTATCT +
Preference number: 5 (lower is better)
Translates to: QHRGGGISGDPHAALADFTVSLA*YFMQLS
Trigger: AGATAACTGCATGAAGTACAATGCCAGGGACACCGT...GAAGTCGGCCAGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCTCGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CAA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCAGCAGCTTTGCCCGCTaGCTCCGGGAGCCGCTGGAC +
Preference number: 5 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTSSFAR*LREPLD
Trigger: GTCCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGCT...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS GCA 90 bp GCTCAGCTTGTTTCGGAGAAGGGCAATTTCCTTTTTGAGCAGCTTTaGCCGCTTGCTCCGGGAGCCGCTGGACTTCATAGCGCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: AQLVSEKGNFLFEQL*PLAPGAAGLHSAGE
Trigger: CTCACCTGCGCTATGAAGTCCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGCTCAAAAAGGAAATTGCCCTTCTCCGAAACAAGCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CCA 90 bp AGCGTAGGTCAGCGTTTCTCGCGTAGGGGAGTGTTTAACACTGCATaGGGAAGAAGGATGCCTCGCTGCAGAGCCTCGATGACATCGTCC +
Preference number: 5 (lower is better)
Translates to: SVGQRFSRRGVFNTA*GRRMPRCRASMTSS
Trigger: GGACGATGTCATCGAGGCTCTGCAGCGAGGCATCCTTCTTCCCCATGCAGTGTTAAACACTCCCCTACGCGAGAAACGCTGACCTACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS CCA 90 bp AATAATCTGGTACCTCCTTCAGACTCACGGGCTGCGCAAATATCCTaGCGGGGTCCTTGTCTTGCAGCTGGTCCAGCACTGAGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: NNLVPPSDSRAAQIS*RGPCLAAGPALSAA
Trigger: TGCTGCGCTCAGTGCTGGACCAGCTGCAAGACAAGGACCCCGCCAGGATATTTGCGCAGCCCGTGAGTCTGAAGGAGGTACCAGATTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGTCGCTGTTTTCCTTGTaGCTGTTGCACTCACTCATC +
Preference number: 5 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWSLFSL*LLHSLI
Trigger: GATGAGTGAGTGCAACAGCAACAAGGAAAACAGCGA...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp TCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGGCTAACCGTTTCCTCATaGTGGCAAAGTCCATGGGAT +
Preference number: 5 (lower is better)
Translates to: SKKVTPAARPGDVRQTHWLTVSS*WQSPWD
Trigger: ATCCCATGGACTTTGCCACAATGAGGAAACGGTTAG...CCAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAAACGGTGTCCCTGGCATaGTACTTCATGCAGTTATCT +
Preference number: 5 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQTVSLA*YFMQLS
Trigger: AGATAACTGCATGAAGTACAATGCCAGGGACACCGT...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCCGCACAAGAGCCGGTTaGCCCCGCCCACATTTGGGC +
Preference number: 5 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTRTRAG*PRPHLG
Trigger: GCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGCG...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp TACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCGTCAGTCACAGACAAAAAGGTTTaGGTCCCTAGCTTCCTCGCC +
Preference number: 5 (lower is better)
Translates to: YSLSTLWTRPALAAGPSVTDKKV*VPSFLA
Trigger: GGCGAGGAAGCTAGGGACCAAAACCTTTTTGTCTGT...GACTGACGGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS CCA 90 bp CTCCTCCACCTCGGAGTCTCCGCATGTGCTCCGCGACCTTTTCCTTaGCTGCAGAAGAGTCTCCAACCTCGGAAGGACTACAGACAAAAA +
Preference number: 5 (lower is better)
Translates to: LLHLGVSACAPRPFP*LQKSLQPRKDYRQK
Trigger: TTTTTGTCTGTAGTCCTTCCGAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCGAGGTGGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCCGCTCGCTGTTTTCCTaGTTGCTGTTGCACTCACTC +
Preference number: 5 (lower is better)
Translates to: KHVQLINTMDKTRAGGRARSLFS*LLLHSL
Trigger: GAGTGAGTGCAACAGCAACAAGGAAAACAGCGAGCG...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGCTAACCGTTTCCTCATaGTGGCAAAGTCCATGGGAT +
Preference number: 5 (lower is better)
Translates to: IKESDASSTAWGRATDALLTVSS*WQSPWD
Trigger: ATCCCATGGACTTTGCCACAATGAGGAAACGGTTAG...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAGCAGCTTTGCCCGCTaGCTCCGGGAGCCGCTGGAC +
Preference number: 5 (lower is better)
Translates to: STHRPESFIQCNAFCSQASSFAR*LREPLD
Trigger: GTCCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGCT...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAGCTACATATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACATCCGCGACCTTTTCCTaGGCTGCAGAAGAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: KLHIKESDASSTAWGRATSATFS*AAEESP
Trigger: TGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGA...TGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGATATGTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCCCAAGGGGAACCATTTaGGACTTAGGAAGCCACTGC +
Preference number: 5 (lower is better)
Translates to: KHVQLINTMDKTRAGGRAPRGTI*DLGSHC
Trigger: GCAGTGGCTTCCTAAGTCCAAAATGGTTCCCCTTGG...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGAGCGGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCCTTACACTTTTCGATTaGCAGAAGAGAACAGAAGTG +
Preference number: 5 (lower is better)
Translates to: GAGTHPPAVTGSGVFLVILTLFD*QKRTEV
Trigger: CACTTCTGTTCTCTTCTGCAAATCGAAAAGTGTAAG...GATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCCGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS GCA 90 bp TCCACCTCGGAGTCTCCGCATGTGCTCCGCGACCTTTTCCTTGGCTaGAGAAGAGTCTCCAACCTCGGAAGGACTACAGACAAAAAGGTT +
Preference number: 5 (lower is better)
Translates to: STSESPHVLRDLFLG*RRVSNLGRTTDKKV
Trigger: AACCTTTTTGTCTGTAGTCCTTCCGAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCGAGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGTTGAGTTCTACTGGTTaGAGGGTTGGTGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: IKESDASSTAWGRATDALLSSTG*RVGGSE
Trigger: TTCAGAACCACCAACCCTCAAACCAGTAGAACTCAA...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS CCA 90 bp GCCAGTAGCTGTGGGCTCGCTCCACAAACTGCTTCTTCCGCTGAATaGCCACCTGATTCGCAATCCTATTTAACCTCTGCGGGGGAATAT +
Preference number: 5 (lower is better)
Translates to: ASSCGLAPQTASSAE*PPDSQSYLTSAGEY
Trigger: ATATTCCCCCGCAGAGGTTAAATAGGATTGCGAATCAGGTGGCCATTCAGCGGAAGAAGCAGTTTGTGGAGCGAGCCCACAGCTACTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp CCACTCACAGCGCCCAGACGGAGATGGGTTCCTAGAAAACTTGGAAATAAAACCCCCTTGCGCTTCTCATaGACGATCTCCAGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: PLTAPRRRWVPRKLGNKTPLRFS*TISSQA
Trigger: TGCCTGGCTGGAGATCGTCAATGAGAAGCGCAAGGG...GGTTTTATTTCCAAGTTTTCTAGGAACCCATCTCCGTCTGGGCGCTGTGAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCTCGCAGAGCGGGCTGTaGCTGGAGGAGATGCTGGAC +
Preference number: 5 (lower is better)
Translates to: STHRPESFIQCNAFCSQASQSGL*LEEMLD
Trigger: GTCCAGCATCTCCTCCAGCAACAGCCCGCTCTGCGA...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp ATCAAAGAAAGTGACGCCAGCAGCACGGCCTGGGGACGTGCGACAGACGCACTGTGCTCCCAAGCCAAGTaGAATTTTTATGTGCCTGTA +
Preference number: 5 (lower is better)
Translates to: IKESDASSTAWGRATDALCSQAK*NFYVPV
Trigger: TACAGGCACATAAAAATTCAACTTGGCTTGGGAGCA...CAGTGCGTCTGTCGCACGTCCCCAGGCCGTGCTGCTGGCGTCACTTTCTTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GGGGACACACCCACCGGCGGTCACGGGCAGCGGAGTGTTTTTGGTGATCTGCAACTTACACTTTTCGATTaGCAGAAGAGAACAGAAGTG +
Preference number: 5 (lower is better)
Translates to: GDTPTGGHGQRSVFGDLQLTLFD*QKRTEV
Trigger: CACTTCTGTTCTCTTCTGCAAATCGAAAAGTGTAAG...TTGCAGATCACCAAAAACACTCCGCTGCCCGTGACCGCCGGTGGGTGTGTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCGGGACGCAGTCGCCCTaGCGCTTCTCATTGACGATC +
Preference number: 5 (lower is better)
Translates to: STHRPESFIQCNAFCSQAGTQSP*RFSLTI
Trigger: GATCGTCAATGAGAAGCGCAAGGGCGACTGCGTCCC...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AAACATGTACAGCTTATCAACACTATGGACAAGACCCGCGCTGGCGGCCGGGCCTCCTTTCCTCCTCATTaGGTAATGATTACCCTGATC +
Preference number: 5 (lower is better)
Translates to: KHVQLINTMDKTRAGGRASFPPH*VMITLI
Trigger: GATCAGGGTAATCATTACCAAATGAGGAGGAAAGGA...GGCCCGGCCGCCAGCGCGGGTCTTGTCCATAGTGTTGATAAGCTGTACATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404034.5
CDS CCA 90 bp GCAGAAGAGTCTCCAACCTCGGAAGGACTACAGACAAAAAGGTTTTaGTCCCTAGCTGAGGAGAAGTTGGCTGGGTTTCAGTGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: AEESPTSEGLQTKRF*SLAEEKLAGFQCSW
Trigger: CCAAGAACACTGAAACCCAGCCAACTTCTCCTCAGCTAGGGACCAAAACCTTTTTGTCTGTAGTCCTTCCGAGGTTGGAGACTCTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCATCCTGGCGGGGTCCTaGTCTTGCAGCTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSILAGS*SCSWSS
Trigger: GCTGGACCAGCTGCAAGACAAGGACCCCGCCAGGAT...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AATCAAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCGGGACGCAGTCGCCCTaGCGCTTCTCATTGACGATC +
Preference number: 5 (lower is better)
Translates to: NQSTHRPESFIQCNAFCSGTQSP*RFSLTI
Trigger: GATCGTCAATGAGAAGCGCAAGGGCGACTGCGTCCC...GGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGGGATGGTGACGCCGTaGTGGTGGCCAGGCACACGG +
Preference number: 5 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYGMVTP*WWPGTR
Trigger: CCGTGTGCCTGGCCACCACAACGGCGTCACCATCCC...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp AGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCTACCATCCTTTGAGCTaGAGCGTAGGTCAGCGTTTC +
Preference number: 5 (lower is better)
Translates to: STHRPESFIQCNAFCSQAYHPLS*SVGQRF
Trigger: GAAACGCTGACCTACGCTCAAGCTCAAAGGATGGTA...GGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS TCA 90 bp TGGAGGGCGTCCGCTTACCAGTGCGCTCTGAGTGCAAGCGCTATGTaGTTCATTATCAAATGTGACTCTTTTGAAAAGTTTACTCTGCTC +
Preference number: 5 (lower is better)
Translates to: WRASAYQCALSASAM*FIIKCDSFEKFTLL
Trigger: GAGCAGAGTAAACTTTTCAAAAGAGTCACATTTGATAATGAATCACATAGCGCTTGCACTCAGAGCGCACTGGTAAGCGGACGCCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTTCGCAGAGCGGGCTGTaGCTGGAGGAGATGCTGGAC +
Preference number: 5 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCSQSGL*LEEMLD
Trigger: GTCCAGCATCTCCTCCAGCAACAGCCCGCTCTGCGA...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS GCA 90 bp AGAAGATCTGAAGCAGTCAAAGGAACCAAACCGACACAGGCCGTCTaGCTGCTGATCACAGTCTCTTTTAAGACACTTTCTACTTTGCAT +
Preference number: 5 (lower is better)
Translates to: RRSEAVKGTKPTQAV*LLITVSFKTLSTLH
Trigger: ATGCAAAGTAGAAAGTGTCTTAAAAGAGACTGTGATCAGCAGGCAGACGGCCTGTGTCGGTTTGGTTCCTTTGACTGCTTCAGATCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459821.1
CDS-3UTR CAA 90 bp AAAAAGAGAACGAGGAACAGCTTCTCATCAGACTTGGTCTGCATGTGCTCCCCATGCTCCCAAGCCAAGTaGAATTTTTATGTGCCTGTA +
Preference number: 5 (lower is better)
Translates to: KKRTRNSFSSDLVCMCSPCSQAK*NFYVPV
Trigger: TACAGGCACATAAAAATTCAACTTGGCTTGGGAGCA...TGGGGAGCACATGCAGACCAAGTCTGATGAGAAGCTGTTCCTCGTTCTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438393.5
CDS-3UTR CAA 90 bp AAAGTACACACAGGCCAGAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCTAGCTGAGGAGAAGTaGGCTGGGTTTCAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: KVHTGQSHLYNAMHSAPKLAEEK*AGFQCS
Trigger: AGAACACTGAAACCCAGCCAACTTCTCCTCAGCTAG...CTTGGGAGCAGAATGCATTGCATTGTATAAATGACTCTGGCCTGTGTGTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTTTGCCCCGCCCACATTaGGGCGCATTAAAGCTCGAG +
Preference number: 5 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCLPRPH*GALKLE
Trigger: CTCGAGCTTTAATGCGCCCAAATGTGGGCGGGGCAA...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS TCA 90 bp ATGAGATCAAAATCCTCCTCAAACTCATGGAGGTTTTTATACCCTTaGGCTTCTAACCGTTTCCTCATTGTGGCAAAGTCCATGGGATGT +
Preference number: 5 (lower is better)
Translates to: MRSKSSSNSWRFLYP*ASNRFLIVAKSMGC
Trigger: ACATCCCATGGACTTTGCCACAATGAGGAAACGGTTAGAAGCTCAAGGGTATAAAAACCTCCATGAGTTTGAGGAGGATTTTGATCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTCGCTCGCTGTTTTCCTaGTTGCTGTTGCACTCACTC +
Preference number: 5 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCRSLFS*LLLHSL
Trigger: GAGTGAGTGCAACAGCAACAAGGAAAACAGCGAGCG...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTTACCATCCTTTGAGCTaGAGCGTAGGTCAGCGTTTC +
Preference number: 5 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCYHPLS*SVGQRF
Trigger: GAAACGCTGACCTACGCTCAAGCTCAAAGGATGGTA...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTACCACAAAAGCATGCTaGGACAGATCTAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCTTKAC*DRSSSA
Trigger: TGCTGAGCTAGATCTGTCCAAGCATGCTTTTGTGGT...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS-3UTR CAA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATTCGCTGTTTTCCTTGTaGCTGTTGCACTCACTCATC +
Preference number: 5 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYSLFSL*LLHSLI
Trigger: GATGAGTGAGTGCAACAGCAACAAGGAAAACAGCGA...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GAGTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATCTAACCGTTTCCTCATaGTGGCAAAGTCCATGGGAT +
Preference number: 5 (lower is better)
Translates to: ESFIQCNAFCSQAKLNFYLTVSS*WQSPWD
Trigger: ATCCCATGGACTTTGCCACAATGAGGAAACGGTTAG...ATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTACGGTGTCCCTGGCATaGTACTTCATGCAGTTATCT +
Preference number: 5 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCTVSLA*YFMQLS
Trigger: AGATAACTGCATGAAGTACAATGCCAGGGACACCGT...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTTTGAGTTCTACTGGTTaGAGGGTTGGTGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCLSSTG*RVGGSE
Trigger: TTCAGAACCACCAACCCTCAAACCAGTAGAACTCAA...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS-3UTR CAA 90 bp GTCATTTATACAATGCAATGCATTCTGCTCCCAAGCCAAGTTGAATTTTTATGTTGCTCCCAAGCCAAGTaGAATTTTTATGTGCCTGTA +
Preference number: 5 (lower is better)
Translates to: VIYTMQCILLPSQVEFLCCSQAK*NFYVPV
Trigger: TACAGGCACATAAAAATTCAACTTGGCTTGGGAGCA...ACATAAAAATTCAACTTGGCTTGGGAGCAGAATGCATTGCATTGTATAAATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CAA 90 bp GGCCTCCTGGGGGCGGACGGAGGGCTGTACTCCACGATGCGCACCTaGGGCTCCGGGAGGGCACTGGCCGAGGCCGGCGTGCCGTGGGCG +
Preference number: 6 (lower is better)
Translates to: GLLGADGGLYSTMRT*GSGRALAEAGVPWA
Trigger: CGCCCACGGCACGCCGGCCTCGGCCAGTGCCCTCCCGGAGCCCAAGGTGCGCATCGTGGAGTACAGCCCTCCGTCCGCCCCCAGGAGGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS CCA 72 bp CCGCGGAGGCCGCCGCCGCCGGCACATCGCCACTACTaGCGCGGGTGGGCTCTGGAGGGCGTCCGCTTACCA +
Preference number: 6 (lower is better)
Translates to: PRRPPPPAHRHY*RGWALEGVRLP
Trigger: TGGTAAGCGGACGCCCTCCAGAGCCCACCCGCGCCAGTAGTGGCGATGTGCCGGCGGCGGCGGCCTCCGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS CCA 72 bp GGGCGGACGGAGGGCTGTACTCCACGATGCGCACCTTaGGCTCCGGGAGGGCACTGGCCGAGGCCGGCGTGC +
Preference number: 6 (lower is better)
Translates to: GRTEGCTPRCAP*APGGHWPRPAC
Trigger: GCACGCCGGCCTCGGCCAGTGCCCTCCCGGAGCCCAAGGTGCGCATCGTGGAGTACAGCCCTCCGTCCGCCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS GCA 72 bp GCCTCCTGGGGGCGGACGGAGGGCTGTACTCCACGATaGGCACCTTGGGCTCCGGGAGGGCACTGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: ASWGRTEGCTPR*APWAPGGHWPR
Trigger: CCTCGGCCAGTGCCCTCCCGGAGCCCAAGGTGCGCATCGTGGAGTACAGCCCTCCGTCCGCCCCCAGGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS GCA 72 bp CCTGTCCACGTCTTCCCAGGAGAAAGGCCGCCGCGGTaGCGCAGCAGGCCGCTCAGGCAGGTGCATCCCCGA +
Preference number: 6 (lower is better)
Translates to: PVHVFPGERPPR*RSRPLRQVHPR
Trigger: TCGGGGATGCACCTGCCTGAGCGGCCTGCTGCGGCACCGCGGCGGCCTTTCTCCTGGGAAGACGTGGACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS GCA 72 bp AGGAAGCCATCGGGCAGAGACAGACCCGGTGCTCAGTaGCCGTCCCACAGTCCCGGCGAGGGGGCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: RKPSGRDRPGAQ*PSHSPGEGAGQ
Trigger: CTGCCCAGCCCCCTCGCCGGGACTGTGGGACGGGCACTGAGCACCGGGTCTGTCTCTGCCCGATGGCTTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479985.1
CDS GCA 72 bp GAGGGAGAGGAAGCCATCGGGCAGAGACAGACCCGGTaGTCAGTGCCCGTCCCACAGTCCCGGCGAGGGGGC +
Preference number: 6 (lower is better)
Translates to: EGEEAIGQRQTR*SVPVPQSRRGG
Trigger: GCCCCCTCGCCGGGACTGTGGGACGGGCACTGAGCACCGGGTCTGTCTCTGCCCGATGGCTTCCTCTCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479985.1
CDS GCA 72 bp TGCCCGTCCCACAGTCCCGGCGAGGGGGCTGGGCAGTaGCCTTCTCCACCAGGCAAACAGCGGAGCACTCAC +
Preference number: 6 (lower is better)
Translates to: CPSHSPGEGAGQ*PSPPGKQRSTH
Trigger: GTGAGTGCTCCGCTGTTTGCCTGGTGGAGAAGGGCACTGCCCAGCCCCCTCGCCGGGACTGTGGGACGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479985.1
CDS CCA 72 bp CGCCGGCACATCGCCACTACTGGCGCGGGTGGGCTCTaGAGGGCGTCCGCTTACCAGTGCGCTCTGAGTGCA +
Preference number: 6 (lower is better)
Translates to: RRHIATTGAGGL*RASAYQCALSA
Trigger: TGCACTCAGAGCGCACTGGTAAGCGGACGCCCTCCAGAGCCCACCCGCGCCAGTAGTGGCGATGTGCCGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS CCA 72 bp TGCTCAGTGCCCGTCCCACAGTCCCGGCGAGGGGGCTaGGCAGTGCCCTTCTCCACCAGGCAAACAGCGGAG +
Preference number: 6 (lower is better)
Translates to: CSVPVPQSRRGG*AVPFSTRQTAE
Trigger: CTCCGCTGTTTGCCTGGTGGAGAAGGGCACTGCCCAGCCCCCTCGCCGGGACTGTGGGACGGGCACTGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479985.1
CDS GCA 72 bp CAGGCAGGTGCATCCCCGAGGCCTCTTCCAAGCCGATaGTGTCCACCTCGCGCCGGGCCTGCCTCAGAACAA +
Preference number: 6 (lower is better)
Translates to: QAGASPRPLPSR*CPPRAGPASEQ
Trigger: TTGTTCTGAGGCAGGCCCGGCGCGAGGTGGACAGCATCGGCTTGGAAGAGGCCTCGGGGATGCACCTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS GCA 72 bp AGCTCGAGTCGCAGAGCGGGCTGTTGCTGGAGGAGATaGTGGACTCGGAGGCACAGCGTCGTCGGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: SSSRRAGCCWRR*WTRRHSVVGVW
Trigger: CCACACCCCGACGACGCTGTGCCTCCGAGTCCAGCATCTCCTCCAGCAACAGCCCGCTCTGCGACTCGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CCA 72 bp TCGAGTCGCAGAGCGGGCTGTTGCTGGAGGAGATGCTaGACTCGGAGGCACAGCGTCGTCGGGGTGTGGCCT +
Preference number: 6 (lower is better)
Translates to: SSRRAGCCWRRC*TRRHSVVGVWP
Trigger: AGGCCACACCCCGACGACGCTGTGCCTCCGAGTCCAGCATCTCCTCCAGCAACAGCCCGCTCTGCGACTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CCA 72 bp GTGCCAACAGGCCAGGCGCACTGGGAGCTCCTCCACTaGTGGCAAGGTGGCCTGAAGCACCAGCATCTCCTG +
Preference number: 6 (lower is better)
Translates to: VPTGQAHWELLH*WQGGLKHQHLL
Trigger: CAGGAGATGCTGGTGCTTCAGGCCACCTTGCCACCAGTGGAGGAGCTCCCAGTGCGCCTGGCCTGTTGGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494833.1
CDS GCA 72 bp ACGGGCTGCGCAAATATCCTGGCGGGGTCCTTGTCTTaGAGCTGGTCCAGCACTGAGCGCAGCAGCACCGTC +
Preference number: 6 (lower is better)
Translates to: TGCANILAGSLS*SWSSTERSSTV
Trigger: GACGGTGCTGCTGCGCTCAGTGCTGGACCAGCTGCAAGACAAGGACCCCGCCAGGATATTTGCGCAGCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CCA 72 bp TGCGCAAATATCCTGGCGGGGTCCTTGTCTTGCAGCTaGTCCAGCACTGAGCGCAGCAGCACCGTCAGCGGG +
Preference number: 6 (lower is better)
Translates to: CANILAGSLSCS*SSTERSSTVSG
Trigger: CCCGCTGACGGTGCTGCTGCGCTCAGTGCTGGACCAGCTGCAAGACAAGGACCCCGCCAGGATATTTGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CAA 72 bp TGCCGTCGCACAAGAGCCGGTTTGCCCCGCCCACATTaGGGCGCATTAAAGCTCGAGTCGCAGAGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: CRRTRAGLPRPH*GALKLESQSGL
Trigger: CAGCCCGCTCTGCGACTCGAGCTTTAATGCGCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGCGACGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CAA 72 bp CGGTCCTCCAGCGTGTGCCGTCGCACAAGAGCCGGTTaGCCCCGCCCACATTTGGGCGCATTAAAGCTCGAG +
Preference number: 6 (lower is better)
Translates to: RSSSVCRRTRAG*PRPHLGALKLE
Trigger: CTCGAGCTTTAATGCGCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CAA 90 bp AGCTCACTGCGGTCCTCCAGCGTGTGCCGTCGCACAAGAGCCGGTTaGCCCCGCCCACATTTGGGCGCATTAAAGCTCGAGTCGCAGAGC +
Preference number: 6 (lower is better)
Translates to: SSLRSSSVCRRTRAG*PRPHLGALKLESQS
Trigger: GCTCTGCGACTCGAGCTTTAATGCGCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGCGACGGCACACGCTGGAGGACCGCAGTGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CAA 90 bp CCTCCTCCACCTCGGAGTCTCCGCATGTGCTCCGCGACCTTTTCCTaGGCTGCAGAAGAGTCTCCAACCTCGGAAGGACTTCCTCGCCCG +
Preference number: 6 (lower is better)
Translates to: PPPPRSLRMCSATFS*AAEESPTSEGLPRP
Trigger: CGGGCGAGGAAGTCCTTCCGAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCGAGGTGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000404034.5
CDS TCA 72 bp CGCACTGGGAGCTCCTCCACTGGTGGCAAGGTGGCCTaGAGCACCAGCATCTCCTGGAGACTGGGAAACCCA +
Preference number: 6 (lower is better)
Translates to: RTGSSSTGGKVA*STSISWRLGNP
Trigger: TGGGTTTCCCAGTCTCCAGGAGATGCTGGTGCTTCAGGCCACCTTGCCACCAGTGGAGGAGCTCCCAGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494833.1
CDS GCA 72 bp ATGCAGCACACGGCGTCCTCGTCGATCAGAGACTGCTaGTCGCCCTGCTTCTGGTTCTCGCAGTGCGACTCC +
Preference number: 6 (lower is better)
Translates to: MQHTASSSIRDC*SPCFWFSQCDS
Trigger: GGAGTCGCACTGCGAGAACCAGAAGCAGGGCGAGCAGCAGTCTCTGATCGACGAGGACGCCGTGTGCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS GCA 72 bp CAGATGCAGCACACGGCGTCCTCGTCGATCAGAGACTaGTGCTCGCCCTGCTTCTGGTTCTCGCAGTGCGAC +
Preference number: 6 (lower is better)
Translates to: QMQHTASSSIRD*CSPCFWFSQCD
Trigger: GTCGCACTGCGAGAACCAGAAGCAGGGCGAGCAGCAGTCTCTGATCGACGAGGACGCCGTGTGCTGCATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS CCA 72 bp AAAGCCGTTGGTGAGACCTGCGTCCAGGCGCTTTCCTaGGGACTCCTCCTCCACCTCGGAGTCTCCGCATGT +
Preference number: 6 (lower is better)
Translates to: KAVGETCVQALS*GLLLHLGVSAC
Trigger: ACATGCGGAGACTCCGAGGTGGAGGAGGAGTCCCCAGGAAAGCGCCTGGACGCAGGTCTCACCAACGGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CCA 72 bp GCAAGGTGGCCTGAAGCACCAGCATCTCCTGGAGACTaGGAAACCCAGACTGCAGAGACCGCGGCCAGGAAC +
Preference number: 6 (lower is better)
Translates to: ARWPEAPASPGD*ETQTAETAARN
Trigger: GTTCCTGGCCGCGGTCTCTGCAGTCTGGGTTTCCCAGTCTCCAGGAGATGCTGGTGCTTCAGGCCACCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494833.1
CDS GCA 72 bp TTCTCGAAGCGGTCCATCAGGAACTCAAACATGCTCTaGGACACGGCGGGGACGCAGTCGCCCTTGCGCTTC +
Preference number: 6 (lower is better)
Translates to: FSKRSIRNSNML*DTAGTQSPLRF
Trigger: GAAGCGCAAGGGCGACTGCGTCCCCGCCGTGTCGCAGAGCATGTTTGAGTTCCTGATGGACCGCTTCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS GCA 72 bp ACTCCTTCTCGAAGCGGTCCATCAGGAACTCAAACATaGTCTGCGACACGGCGGGGACGCAGTCGCCCTTGC +
Preference number: 6 (lower is better)
Translates to: TPSRSGPSGTQT*SATRRGRSRPC
Trigger: GCAAGGGCGACTGCGTCCCCGCCGTGTCGCAGAGCATGTTTGAGTTCCTGATGGACCGCTTCGAGAAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS GCA 72 bp ACGGCGTCCTCGTCGATCAGAGACTGCTGCTCGCCCTaGTTCTGGTTCTCGCAGTGCGACTCCTTCTCGAAG +
Preference number: 6 (lower is better)
Translates to: TASSSIRDCCSP*FWFSQCDSFSK
Trigger: CTTCGAGAAGGAGTCGCACTGCGAGAACCAGAAGCAGGGCGAGCAGCAGTCTCTGATCGACGAGGACGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS CCA 72 bp TCCTCGTCGATCAGAGACTGCTGCTCGCCCTGCTTCTaGTTCTCGCAGTGCGACTCCTTCTCGAAGCGGTCC +
Preference number: 6 (lower is better)
Translates to: SSSIRDCCSPCF*FSQCDSFSKRS
Trigger: GGACCGCTTCGAGAAGGAGTCGCACTGCGAGAACCAGAAGCAGGGCGAGCAGCAGTCTCTGATCGACGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS CAA 72 bp TTGGGCGCATTAAAGCTCGAGTCGCAGAGCGGGCTGTaGCTGGAGGAGATGCTGGACTCGGAGGCACAGCGT +
Preference number: 6 (lower is better)
Translates to: LGALKLESQSGL*LEEMLDSEAQR
Trigger: ACGCTGTGCCTCCGAGTCCAGCATCTCCTCCAGCAACAGCCCGCTCTGCGACTCGAGCTTTAATGCGCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS GCA 72 bp AGCACCAGCATCTCCTGGAGACTGGGAAACCCAGACTaGAGAGACCGCGGCCAGGAACACTCGTCCAGGTTT +
Preference number: 6 (lower is better)
Translates to: STSISWRLGNPD*RDRGQEHSSRF
Trigger: AAACCTGGACGAGTGTTCCTGGCCGCGGTCTCTGCAGTCTGGGTTTCCCAGTCTCCAGGAGATGCTGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494833.1
CDS CCA 72 bp GTACCTCCTTCAGACTCACGGGCTGCGCAAATATCCTaGCGGGGTCCTTGTCTTGCAGCTGGTCCAGCACTG +
Preference number: 6 (lower is better)
Translates to: VPPSDSRAAQIS*RGPCLAAGPAL
Trigger: CAGTGCTGGACCAGCTGCAAGACAAGGACCCCGCCAGGATATTTGCGCAGCCCGTGAGTCTGAAGGAGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CAA 72 bp TTCCTCACCCCATCGATGGGCTCGATGAACACCGTGTaGGCAAAGCCGACCTCTGGGATCCACAGGGCACAC +
Preference number: 6 (lower is better)
Translates to: FLTPSMGSMNTV*AKPTSGIHRAH
Trigger: GTGTGCCCTGTGGATCCCAGAGGTCGGCTTTGCCAACACGGTGTTCATCGAGCCCATCGATGGGGTGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS TCA 72 bp GGCTCAGCTTGTTTCGGAGAAGGGCAATTTCCTTTTTaGGCAGCTTTGCCCGCTTGCTCCGGGAGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: GSACFGEGQFPF*AALPACSGSRW
Trigger: CCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGCTCAAAAAGGAAATTGCCCTTCTCCGAAACAAGCTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS GCA 72 bp GAGTCTCCGCATGTGCTCCGCGACCTTTTCCTTGGCTaGAGAAGAGTCTCCAACCTCGGAAGGACTTCCTCG +
Preference number: 6 (lower is better)
Translates to: ESPHVLRDLFLG*RRVSNLGRTSS
Trigger: CGAGGAAGTCCTTCCGAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGAGCACATGCGGAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000404034.5
CDS CCA 72 bp CTCGGAGTCTCCGCATGTGCTCCGCGACCTTTTCCTTaGCTGCAGAAGAGTCTCCAACCTCGGAAGGACTTC +
Preference number: 6 (lower is better)
Translates to: LGVSACAPRPFP*LQKSLQPRKDF
Trigger: GAAGTCCTTCCGAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000404034.5
CDS CCA 72 bp CTCGGAGTCTCCGCATGTGCTCCGCGACCTTTTCCTTaGCTGCAGAAGAGTCTCCAACCTCGGAAGGACTAC +
Preference number: 6 (lower is better)
Translates to: LGVSACAPRPFP*LQKSLQPRKDY
Trigger: GTAGTCCTTCCGAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CAA 72 bp CCTCGGAGTCTCCGCATGTGCTCCGCGACCTTTTCCTaGGCTGCAGAAGAGTCTCCAACCTCGGAAGGACTT +
Preference number: 6 (lower is better)
Translates to: PRSLRMCSATFS*AAEESPTSEGL
Trigger: AAGTCCTTCCGAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000404034.5
CDS CAA 72 bp CCTCGGAGTCTCCGCATGTGCTCCGCGACCTTTTCCTaGGCTGCAGAAGAGTCTCCAACCTCGGAAGGACTA +
Preference number: 6 (lower is better)
Translates to: PRSLRMCSATFS*AAEESPTSEGL
Trigger: TAGTCCTTCCGAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CAA 72 bp ACTGCAGAGACCGCGGCCAGGAACACTCGTCCAGGTTaGTTTCTCTCTCTCTACTCGAAGCTCTGCGGGGGA +
Preference number: 6 (lower is better)
Translates to: TAETAARNTRPG*FLSLYSKLCGG
Trigger: TCCCCCGCAGAGCTTCGAGTAGAGAGAGAGAAACAAACCTGGACGAGTGTTCCTGGCCGCGGTCTCTGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494833.1
CDS CAA 90 bp TTGTTTCGGAGAAGGGCAATTTCCTTTTTGAGCAGCTTTGCCCGCTaGCTCCGGGAGCCGCTGGACTTCATAGCGCAGGTGAGGTCGAGC +
Preference number: 6 (lower is better)
Translates to: LFRRRAISFLSSFAR*LREPLDFIAQVRSS
Trigger: GCTCGACCTCACCTGCGCTATGAAGTCCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGCTCAAAAAGGAAATTGCCCTTCTCCGAAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CAA 90 bp CCTCCTCCACCTCGGAGTCTCCGCATGTGCTCCGCGACCTTTTCCTaGGCTGCAGAAGAGTCTCCAACCTCGGAAGGACTACAGACAAAA +
Preference number: 6 (lower is better)
Translates to: PPPPRSLRMCSATFS*AAEESPTSEGLQTK
Trigger: TTTTGTCTGTAGTCCTTCCGAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCGAGGTGGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS GCA 72 bp TTTCGACATCCCCGTAAATATTCAGAGGCCTCCGGGTaGAGCCTGGAGGCGTGTGGACATCACAGTAAGCGG +
Preference number: 6 (lower is better)
Translates to: FRHPRKYSEASG*SLEACGHHSKR
Trigger: CCGCTTACTGTGATGTCCACACGCCTCCAGGCTGCACCCGGAGGCCTCTGAATATTTACGGGGATGTCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
ENST00000459821.1
ENST00000494833.1
CDS GCA 72 bp GAGTCTCCGCATGTGCTCCGCGACCTTTTCCTTGGCTaGAGAAGAGTCTCCAACCTCGGAAGGACTACAGAC +
Preference number: 6 (lower is better)
Translates to: ESPHVLRDLFLG*RRVSNLGRTTD
Trigger: GTCTGTAGTCCTTCCGAGGTTGGAGACTCTTCTGCAGCCAAGGAAAAGGTCGCGGAGCACATGCGGAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CCA 72 bp CAGCGTTTCTCGCGTAGGGGAGTGTTTAACACTGCATaGGGAAGAAGGATGCCTCGCTGCAGAGCCTCGATG +
Preference number: 6 (lower is better)
Translates to: QRFSRRGVFNTA*GRRMPRCRASM
Trigger: CATCGAGGCTCTGCAGCGAGGCATCCTTCTTCCCCATGCAGTGTTAAACACTCCCCTACGCGAGAAACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS CCA 72 bp CTGCTTACAGAGGTAGCATGTCAGTTTCCACCGGGCTaGAGGGATGTTCCTCACCCCATCGATGGGCTCGAT +
Preference number: 6 (lower is better)
Translates to: LLTEVACQFPPG*RDVPHPIDGLD
Trigger: ATCGAGCCCATCGATGGGGTGAGGAACATCCCTCCAGCCCGGTGGAAACTGACATGCTACCTCTGTAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS CAA 72 bp AGAAGGGCAATTTCCTTTTTGAGCAGCTTTGCCCGCTaGCTCCGGGAGCCGCTGGACTTCATAGCGCAGGTG +
Preference number: 6 (lower is better)
Translates to: RRAISFLSSFAR*LREPLDFIAQV
Trigger: CACCTGCGCTATGAAGTCCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGCTCAAAAAGGAAATTGCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CAA 72 bp TGGCTCAGCTTGTTTCGGAGAAGGGCAATTTCCTTTTaGAGCAGCTTTGCCCGCTTGCTCCGGGAGCCGCTG +
Preference number: 6 (lower is better)
Translates to: WLSLFRRRAISF*SSFARLLREPL
Trigger: CAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGCTCAAAAAGGAAATTGCCCTTCTCCGAAACAAGCTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CAA 90 bp CTGTGCTGCTGGCTCAGCTTGTTTCGGAGAAGGGCAATTTCCTTTTaGAGCAGCTTTGCCCGCTTGCTCCGGGAGCCGCTGGACTTCATA +
Preference number: 6 (lower is better)
Translates to: LCCWLSLFRRRAISF*SSFARLLREPLDFI
Trigger: TATGAAGTCCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGCTCAAAAAGGAAATTGCCCTTCTCCGAAACAAGCTGAGCCAGCAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS TCA 72 bp GTGGGCTCTGGAGGGCGTCCGCTTACCAGTGCGCTCTaGGTGCAAGCGCTATGTGATTCATTATCAAATGTG +
Preference number: 6 (lower is better)
Translates to: VGSGGRPLTSAL*VQALCDSLSNV
Trigger: CACATTTGATAATGAATCACATAGCGCTTGCACTCAGAGCGCACTGGTAAGCGGACGCCCTCCAGAGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS CCA 72 bp TGTGGGCTCGCTCCACAAACTGCTTCTTCCGCTGAATaGCCACCTGATTCGCAATCCTATTTAACCTCTGCG +
Preference number: 6 (lower is better)
Translates to: CGLAPQTASSAE*PPDSQSYLTSA
Trigger: CGCAGAGGTTAAATAGGATTGCGAATCAGGTGGCCATTCAGCGGAAGAAGCAGTTTGTGGAGCGAGCCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CAA 72 bp GCGCCCTTCAATTTCTATCTCTACCATCCTTTGAGCTaGAGCGTAGGTCAGCGTTTCTCGCGTAGGGGAGTG +
Preference number: 6 (lower is better)
Translates to: APFNFYLYHPLS*SVGQRFSRRGV
Trigger: CACTCCCCTACGCGAGAAACGCTGACCTACGCTCAAGCTCAAAGGATGGTAGAGATAGAAATTGAAGGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS GCA 72 bp GGCTTACACTTTTCGATTTGCAGAAGAGAACAGAAGTaGGTCTGTTTACATCGCTTGCTGGCTCCGCCACCG +
Preference number: 6 (lower is better)
Translates to: GLHFSICRREQK*VCLHRLLAPPP
Trigger: CGGTGGCGGAGCCAGCAAGCGATGTAAACAGACGCACTTCTGTTCTCTTCTGCAAATCGAAAAGTGTAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS CAA 72 bp GTGCAAGCGCCCTTCAATTTCTATCTCTACCATCCTTaGAGCTTGAGCGTAGGTCAGCGTTTCTCGCGTAGG +
Preference number: 6 (lower is better)
Translates to: VQAPFNFYLYHP*SLSVGQRFSRR
Trigger: CCTACGCGAGAAACGCTGACCTACGCTCAAGCTCAAAGGATGGTAGAGATAGAAATTGAAGGGCGCTTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS CAA 90 bp CCTGTGCAAGCGCCCTTCAATTTCTATCTCTACCATCCTTTGAGCTaGAGCGTAGGTCAGCGTTTCTCGCGTAGGGGAGTGTTTAACACT +
Preference number: 6 (lower is better)
Translates to: PVQAPFNFYLYHPLS*SVGQRFSRRGVFNT
Trigger: AGTGTTAAACACTCCCCTACGCGAGAAACGCTGACCTACGCTCAAGCTCAAAGGATGGTAGAGATAGAAATTGAAGGGCGCTTGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS CAA 90 bp ACTGATCCTGTGCAAGCGCCCTTCAATTTCTATCTCTACCATCCTTaGAGCTTGAGCGTAGGTCAGCGTTTCTCGCGTAGGGGAGTGTTT +
Preference number: 6 (lower is better)
Translates to: TDPVQAPFNFYLYHP*SLSVGQRFSRRGVF
Trigger: AAACACTCCCCTACGCGAGAAACGCTGACCTACGCTCAAGCTCAAAGGATGGTAGAGATAGAAATTGAAGGGCGCTTGCACAGGATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS TCA 72 bp GGAAGGACTACAGACAAAAAGGTTTTGGTCCCTAGCTaGGGAGAAGTTGGCTGGGTTTCAGTGTTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: GRTTDKKVLVPS*GEVGWVSVFLA
Trigger: TGCCAAGAACACTGAAACCCAGCCAACTTCTCCTCAGCTAGGGACCAAAACCTTTTTGTCTGTAGTCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS GCA 72 bp GAAGCAGTCAAAGGAACCAAACCGACACAGGCCGTCTaGCTGCTGATCACAGTCTCTTTTAAGACACTTTCT +
Preference number: 6 (lower is better)
Translates to: EAVKGTKPTQAV*LLITVSFKTLS
Trigger: AGAAAGTGTCTTAAAAGAGACTGTGATCAGCAGGCAGACGGCCTGTGTCGGTTTGGTTCCTTTGACTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459821.1
CDS CAA 90 bp TCTACGCAGGGTGACCAAAGACTCGAGAAAACCACAAAAGCATGCTaGGACAGATCTAGCTCAGCAGCTCAAAGCCCAATCAAAGCAAAA +
Preference number: 6 (lower is better)
Translates to: STQGDQRLEKTTKAC*DRSSSAAQSPIKAK
Trigger: TTTTGCTTTGATTGGGCTTTGAGCTGCTGAGCTAGATCTGTCCAAGCATGCTTTTGTGGTTTTCTCGAGTCTTTGGTCACCCTGCGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216267.12
ENST00000457780.3
CDS TCA 72 bp TCAAAGGAACCAAACCGACACAGGCCGTCTGCCTGCTaGTCACAGTCTCTTTTAAGACACTTTCTACTTTGC +
Preference number: 6 (lower is better)
Translates to: SKEPNRHRPSAC*SQSLLRHFLLC
Trigger: GCAAAGTAGAAAGTGTCTTAAAAGAGACTGTGATCAGCAGGCAGACGGCCTGTGTCGGTTTGGTTCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459821.1
CDS TCA 72 bp AAATCCTCCTCAAACTCATGGAGGTTTTTATACCCTTaGGCTTCTAACCGTTTCCTCATTGTGGCAAAGTCC +
Preference number: 6 (lower is better)
Translates to: KSSSNSWRFLYP*ASNRFLIVAKS
Trigger: GGACTTTGCCACAATGAGGAAACGGTTAGAAGCTCAAGGGTATAAAAACCTCCATGAGTTTGAGGAGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000438393.5
ENST00000457780.3
CDS CAA 90 bp ACTCTTTTGAAAAGTTTACTCTGCTCTGGGTTGAGTTCTACTGGTTaGAGGGTTGGTGGTTCTGAATTAGTCTCCGAGTTTGAAGGAAGA +
Preference number: 6 (lower is better)
Translates to: TLLKSLLCSGLSSTG*RVGGSELVSEFEGR
Trigger: TCTTCCTTCAAACTCGGAGACTAATTCAGAACCACCAACCCTCAAACCAGTAGAACTCAACCCAGAGCAGAGTAAACTTTTCAAAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS GCA 72 bp AATATGATCTCCAGGGGATCAAAAATACTGATCCTGTaGAAGCGCCCTTCAATTTCTATCTCTACCATCCTT +
Preference number: 6 (lower is better)
Translates to: NMISRGSKILIL*KRPSISISTIL
Trigger: AAGGATGGTAGAGATAGAAATTGAAGGGCGCTTGCACAGGATCAGTATTTTTGATCCCCTGGAGATCATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216267.12
ENST00000404034.5
ENST00000404760.5
ENST00000457780.3
CDS CAA 72 bp AATGTGACTCTTTTGAAAAGTTTACTCTGCTCTGGGTaGAGTTCTACTGGTTTGAGGGTTGGTGGTTCTGAA +
Preference number: 6 (lower is better)
Translates to: NVTLLKSLLCSG*SSTGLRVGGSE
Trigger: TTCAGAACCACCAACCCTCAAACCAGTAGAACTCAACCCAGAGCAGAGTAAACTTTTCAAAAGAGTCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3
CDS CAA 90 bp TCATTATCAAATGTGACTCTTTTGAAAAGTTTACTCTGCTCTGGGTaGAGTTCTACTGGTTTGAGGGTTGGTGGTTCTGAATTAGTCTCC +
Preference number: 6 (lower is better)
Translates to: SLSNVTLLKSLLCSG*SSTGLRVGGSELVS
Trigger: GGAGACTAATTCAGAACCACCAACCCTCAAACCAGTAGAACTCAACCCAGAGCAGAGTAAACTTTTCAAAAGAGTCACATTTGATAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404760.5
ENST00000457780.3