RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRCC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000185515

Ensembl transcript IDs: ENST00000330045.12, ENST00000340647.8, ENST00000369459.6, ENST00000369462.5, ENST00000399042.4, ENST00000411985.5, ENST00000453705.1, ENST00000620502.4, ENST00000630295.1

Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTATCTAGACCACAGACTTTATTCAGTATCACCAGATTTTACATaGATTCATTTGTGTGTATGTAGGTCCATACAACTTCAGCACAGG +
Preference number: 1 (lower is better)
Translates to: CYLDHRLYSVSPDFT*IHLCVCRSIQLQHR
Trigger: CCTGTGCTGAAGTTGTATGGACCTACATACACACAAATGAATGCATGTAAAATCTGGTGATACTGAATAAAGTCTGTGGTCTAGATAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
3UTR-3UTR CCA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTAGTAGCTGGGACTACTaGTGTGTGTCATGGTGCCCA +
Preference number: 2 (lower is better)
Translates to: PLQSLSLATINLFFISIISSWDY*CVSWCP
Trigger: TGGGCACCATGACACACACCAGTAGTCCCAGCTACT...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp ATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCATTCCAGGTTGGAGTGTGGTaGTGTGATCACAGCTCACCG +
Preference number: 2 (lower is better)
Translates to: IPLRYNQVLVSTVSSFSFQVGVW*CDHSSP
Trigger: CGGTGAGCTGTGATCACACCACCACACTCCAACCTG...GAATGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp AAATTCATAAACTCTTTCCCAGAGTGGCTGTACCATTTTACATTCCTGTCAGCAAGTAGCTGGGACTACTaGTGTGTGTCATGGTGCCCA +
Preference number: 2 (lower is better)
Translates to: KFINSFPEWLYHFTFLSASSWDY*CVSWCP
Trigger: TGGGCACCATGACACACACCAGTAGTCCCAGCTACT...TGCTGACAGGAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTTTATGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp AAATTCATAAACTCTTTCCCAGAGTGGCTGTACCATTTTACATTCCTGTCAGCATGCCTCCCTAGTAGCTaGGACTACTGGTGTGTGTCA +
Preference number: 2 (lower is better)
Translates to: KFINSFPEWLYHFTFLSACLPSS*DYWCVS
Trigger: TGACACACACCAGTAGTCCCAGCTACTAGGGAGGCA...TGCTGACAGGAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTTTATGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCACAGGTTGGAGTGTGGTaGTGTGATCACAGCTCACCG +
Preference number: 2 (lower is better)
Translates to: QSLSLATINLFFISIILSQVGVW*CDHSSP
Trigger: CGGTGAGCTGTGATCACACCACCACACTCCAACCTG...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTACAGGTTGGAGTGTGGTaGTGTGATCACAGCTCACCG +
Preference number: 2 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVQVGVW*CDHSSP
Trigger: CGGTGAGCTGTGATCACACCACCACACTCCAACCTG...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTAGATGTGTAAGGCTGTaGATCCTCCTATACGCATCC +
Preference number: 2 (lower is better)
Translates to: PLQSLSLATINLFFISIIRCVRL*ILLYAS
Trigger: GGATGCGTATAGGAGGATCCACAGCCTTACACATCT...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453705.1
3UTR-3UTR GCA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTGTCCAGGAGCACAACTaGTGGGTCTTATGTTTAACT +
Preference number: 2 (lower is better)
Translates to: PLQSLSLATINLFFISIIVQEHN*WVLCLT
Trigger: AGTTAAACATAAGACCCAGCAGTTGTGCTCCTGGAC...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTATGCCTCCCTAGTAGCTaGGACTACTGGTGTGTGTCA +
Preference number: 2 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVCLPSS*DYWCVS
Trigger: TGACACACACCAGTAGTCCCAGCTACTAGGGAGGCA...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp AAGCATGAGCTACCATGCCTGACTTCAGTTGAGTTTTTAGTACACTTTATATATCAGGTTGGAGTGTGGTaGTGTGATCACAGCTCACCG +
Preference number: 2 (lower is better)
Translates to: KHELPCLTSVEFLVHFIYQVGVW*CDHSSP
Trigger: CGGTGAGCTGTGATCACACCACCACACTCCAACCTG...ATATATAAAGTGTACTAAAAACTCAACTGAAGTCAGGCATGGTAGCTCATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR TCA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTCATTTCTCTGGAATaGATGTCCAGGAGCACAACT +
Preference number: 2 (lower is better)
Translates to: PLQSLSLATINLFFISIIFISLE*MSRSTT
Trigger: AGTTGTGCTCCTGGACATTCATTCCAGAGAAATGAA...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR GCA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTGTCTTTTATGGATGTaGTTTCGGGGCAAAGTCCAA +
Preference number: 2 (lower is better)
Translates to: PLQSLSLATINLFFISIICLLWM*FRGKVQ
Trigger: TTGGACTTTGCCCCGAAAGCACATCCATAAAAGACA...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp AAGCATGAGCTACCATGCCTGACTTCAGTTGAGTTTTTAGTACACTTTATATATAGTAGCTGGGACTACTaGTGTGTGTCATGGTGCCCA +
Preference number: 2 (lower is better)
Translates to: KHELPCLTSVEFLVHFIYSSWDY*CVSWCP
Trigger: TGGGCACCATGACACACACCAGTAGTCCCAGCTACT...ATATATAAAGTGTACTAAAAACTCAACTGAAGTCAGGCATGGTAGCTCATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp AAGCATGAGCTACCATGCCTGACTTCAGTTGAGTTTTTAGTACACTTTATATATTGCCTCCCTAGTAGCTaGGACTACTGGTGTGTGTCA +
Preference number: 2 (lower is better)
Translates to: KHELPCLTSVEFLVHFIYCLPSS*DYWCVS
Trigger: TGACACACACCAGTAGTCCCAGCTACTAGGGAGGCA...ATATATAAAGTGTACTAAAAACTCAACTGAAGTCAGGCATGGTAGCTCATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR GCA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTCCATGGGTGTCTAATTaGTCTAGCATAATTTGTCAG +
Preference number: 2 (lower is better)
Translates to: PLQSLSLATINLFFISIIPWVSN*SSIICQ
Trigger: CTGACAAATTATGCTAGAGCAATTAGACACCCATGG...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR GCA 90 bp ATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCATTCGTCCAGGAGCACAACTaGTGGGTCTTATGTTTAACT +
Preference number: 2 (lower is better)
Translates to: IPLRYNQVLVSTVSSFSFVQEHN*WVLCLT
Trigger: AGTTAAACATAAGACCCAGCAGTTGTGCTCCTGGAC...GAATGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR TCA 90 bp TTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTCTTCTCATCTGTTCCATTaGCGTATGTGTCTGTTCCTC +
Preference number: 2 (lower is better)
Translates to: FIWVYFWVLSSVPLTYVSSHLFH*RMCLFL
Trigger: GAGGAACAGACACATACGTCAATGGAACAGATGAGA...AGACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR TCA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCATCTCATCTGTTCCATTaGCGTATGTGTCTGTTCCTC +
Preference number: 2 (lower is better)
Translates to: QSLSLATINLFFISIILSSHLFH*RMCLFL
Trigger: GAGGAACAGACACATACGTCAATGGAACAGATGAGA...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR GCA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCAGGTACATGGCTTGTGTaGGAACATCAACATGTGAAG +
Preference number: 2 (lower is better)
Translates to: QSLSLATINLFFISIILSGTWLV*EHQHVK
Trigger: CTTCACATGTTGATGTTCGCACACAAGCCATGTACC...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453705.1
3UTR-3UTR TCA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCATTCATTTCTCTGGAATaGATGTCCAGGAGCACAACT +
Preference number: 2 (lower is better)
Translates to: QSLSLATINLFFISIILSFISLE*MSRSTT
Trigger: AGTTGTGCTCCTGGACATTCATTCCAGAGAAATGAA...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR TCA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTATTCATTTCTCTGGAATaGATGTCCAGGAGCACAACT +
Preference number: 2 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVFISLE*MSRSTT
Trigger: AGTTGTGCTCCTGGACATTCATTCCAGAGAAATGAA...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR TCA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTAGATTCTCTCATACTCTaGACTCTTTTGGGCCTGTAT +
Preference number: 2 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVDSLIL*TLLGLY
Trigger: ATACAGGCCCAAAAGAGTTCAGAGTATGAGAGAATC...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453705.1
3UTR-3UTR GCA 90 bp ATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCATTCCCATGGGTGTCTAATTaGTCTAGCATAATTTGTCAG +
Preference number: 2 (lower is better)
Translates to: IPLRYNQVLVSTVSSFSFPWVSN*SSIICQ
Trigger: CTGACAAATTATGCTAGAGCAATTAGACACCCATGG...GAATGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR GCA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCATGTCTTTTATGGATGTaGTTTCGGGGCAAAGTCCAA +
Preference number: 2 (lower is better)
Translates to: QSLSLATINLFFISIILSCLLWM*FRGKVQ
Trigger: TTGGACTTTGCCCCGAAAGCACATCCATAAAAGACA...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTCTGAGCATATTTATATaGGTTTATTTCTGGGTTCTC +
Preference number: 2 (lower is better)
Translates to: PLQSLSLATINLFFISIILSIFI*VYFWVL
Trigger: GAGAACCCAGAAATAAACCCATATAAATATGCTCAG...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR TCA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTAATTCTTGGTAAACACTaGGCCATTATGGATCTTGGT +
Preference number: 2 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVILGKH*AIMDLG
Trigger: ACCAAGATCCATAATGGCTCAGTGTTTACCAAGAAT...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453705.1
3UTR-3UTR GCA 90 bp TTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTCTCCATGGGTGTCTAATTaGTCTAGCATAATTTGTCAG +
Preference number: 2 (lower is better)
Translates to: FIWVYFWVLSSVPLTYVSPWVSN*SSIICQ
Trigger: CTGACAAATTATGCTAGAGCAATTAGACACCCATGG...AGACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp AAATTCATAAACTCTTTCCCAGAGTGGCTGTACCATTTTACATTCCTGTCAGCAATATGGGTTTATTTCTaGGTTCTCTCATCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: KFINSFPEWLYHFTFLSAIWVYF*VLSSVP
Trigger: TGGAACAGATGAGAGAACCCAGAAATAAACCCATAT...TGCTGACAGGAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTTTATGAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp ATAATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCAAACTCTTTCCCAGAGTaGCTGTACCATTTTACATTC +
Preference number: 2 (lower is better)
Translates to: IIPLRYNQVLVSTVSSFSNSFPE*LYHFTF
Trigger: GAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTT...TGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp ATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCATTCCAGTATTCCAAGTTATaGATGGTTTGTTTAACCATG +
Preference number: 2 (lower is better)
Translates to: IPLRYNQVLVSTVSSFSFQYSKL*MVCLTM
Trigger: CATGGTTAAACAAACCATCCATAACTTGGAATACTG...GAATGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp AAGCATGAGCTACCATGCCTGACTTCAGTTGAGTTTTTAGTACACTTTATATATATATGGGTTTATTTCTaGGTTCTCTCATCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: KHELPCLTSVEFLVHFIYIWVYF*VLSSVP
Trigger: TGGAACAGATGAGAGAACCCAGAAATAAACCCATAT...ATATATAAAGTGTACTAAAAACTCAACTGAAGTCAGGCATGGTAGCTCATGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp ATAATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCACTGAGCATATTTATATaGGTTTATTTCTGGGTTCTC +
Preference number: 2 (lower is better)
Translates to: IIPLRYNQVLVSTVSSFSLSIFI*VYFWVL
Trigger: GAGAACCCAGAAATAAACCCATATAAATATGCTCAG...TGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTACTGAGCATATTTATATaGGTTTATTTCTGGGTTCTC +
Preference number: 2 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVLSIFI*VYFWVL
Trigger: GAGAACCCAGAAATAAACCCATATAAATATGCTCAG...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCACAGTATTCCAAGTTATaGATGGTTTGTTTAACCATG +
Preference number: 2 (lower is better)
Translates to: QSLSLATINLFFISIILSQYSKL*MVCLTM
Trigger: CATGGTTAAACAAACCATCCATAACTTGGAATACTG...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CCA 90 bp ATAATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCACAGTATTCCAAGTTATaGATGGTTTGTTTAACCATG +
Preference number: 2 (lower is better)
Translates to: IIPLRYNQVLVSTVSSFSQYSKL*MVCLTM
Trigger: CATGGTTAAACAAACCATCCATAACTTGGAATACTG...TGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CAA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTACTCTGTTACACAGGTaGGAGTGTGGTGGTGTGATC +
Preference number: 3 (lower is better)
Translates to: PLQSLSLATINLFFISIITLLHR*ECGGVI
Trigger: GATCACACCACCACACTCCAACCTGTGTAACAGAGT...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CAA 90 bp AAATTCATAAACTCTTTCCCAGAGTGGCTGTACCATTTTACATTCCTGTCAGCAACTCTGTTACACAGGTaGGAGTGTGGTGGTGTGATC +
Preference number: 3 (lower is better)
Translates to: KFINSFPEWLYHFTFLSATLLHR*ECGGVI
Trigger: GATCACACCACCACACTCCAACCTGTGTAACAGAGT...TGCTGACAGGAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTTTATGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CAA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCAACTCTGTTACACAGGTaGGAGTGTGGTGGTGTGATC +
Preference number: 3 (lower is better)
Translates to: QSLSLATINLFFISIILSTLLHR*ECGGVI
Trigger: GATCACACCACCACACTCCAACCTGTGTAACAGAGT...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CAA 90 bp ATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCATTCTGTAGGACATCTGGGTaGTTTCCAGTTTGGGGCTAT +
Preference number: 3 (lower is better)
Translates to: IPLRYNQVLVSTVSSFSFCRTSG*FPVWGY
Trigger: ATAGCCCCAAACTGGAAACAACCCAGATGTCCTACA...GAATGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CAA 90 bp ATAATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCATGTAGGACATCTGGGTaGTTTCCAGTTTGGGGCTAT +
Preference number: 3 (lower is better)
Translates to: IIPLRYNQVLVSTVSSFSCRTSG*FPVWGY
Trigger: ATAGCCCCAAACTGGAAACAACCCAGATGTCCTACA...TGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CAA 90 bp ATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCATTCCGCTGTGGTTTCAATTaGCATTCCCTGATGACTTAT +
Preference number: 3 (lower is better)
Translates to: IPLRYNQVLVSTVSSFSFRCGFN*HSLMTY
Trigger: ATAAGTCATCAGGGAATGCAAATTGAAACCACAGCG...GAATGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR-3UTR CAA 90 bp ATAATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCACGCTGTGGTTTCAATTaGCATTCCCTGATGACTTAT +
Preference number: 3 (lower is better)
Translates to: IIPLRYNQVLVSTVSSFSRCGFN*HSLMTY
Trigger: ATAAGTCATCAGGGAATGCAAATTGAAACCACAGCG...TGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR CCA 72 bp CAAAATCAGCTGAGCATATTTATATGGGTTTATTTCTaGGTTCTCTCATCTGTTCCATTGACGTATGTGTCT +
Preference number: 3 (lower is better)
Translates to: QNQLSIFIWVYF*VLSSVPLTYVS
Trigger: AGACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAATATGCTCAGCTGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTCCTGCACCGCCATCTTaGCCCGACCCTTCTCACGTC +
Preference number: 4 (lower is better)
Translates to: PLQSLSLATINLFFISIIPAPPS*PDPSHV
Trigger: GACGTGAGAAGGGTCGGGCCAAGATGGCGGTGCAGG...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369459.6
ENST00000369462.5
CDS-3UTR TCA 90 bp AAATTCATAAACTCTTTCCCAGAGTGGCTGTACCATTTTACATTCCTGTCAGCAGCGTCAGACTCGAGATaGACCGCCTGCACCGCCTGC +
Preference number: 4 (lower is better)
Translates to: KFINSFPEWLYHFTFLSAASDSR*TACTAC
Trigger: GCAGGCGGTGCAGGCGGTTCATCTCGAGTCTGACGC...TGCTGACAGGAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTTTATGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR TCA 90 bp ATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCATTCGCGTCAGACTCGAGATaGACCGCCTGCACCGCCTGC +
Preference number: 4 (lower is better)
Translates to: IPLRYNQVLVSTVSSFSFASDSR*TACTAC
Trigger: GCAGGCGGTGCAGGCGGTTCATCTCGAGTCTGACGC...GAATGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp TTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTCTACCGCCTGCACCGCCTaGACCACCTGCACCGCCATC +
Preference number: 4 (lower is better)
Translates to: FIWVYFWVLSSVPLTYVSTACTA*TTCTAI
Trigger: GATGGCGGTGCAGGTGGTGCAGGCGGTGCAGGCGGT...AGACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
CDS-3UTR TCA 90 bp TTCCCTGATGACTTATGGAGTTTAACAGCTTTTCATATGCTTACTTGCCATCTAGCGTCAGACTCGAGATaGACCGCCTGCACCGCCTGC +
Preference number: 4 (lower is better)
Translates to: FPDDLWSLTAFHMLTCHLASDSR*TACTAC
Trigger: GCAGGCGGTGCAGGCGGTTCATCTCGAGTCTGACGC...TAGATGGCAAGTAAGCATATGAAAAGCTGTTAAACTCCATAAGTCATCAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR TCA 90 bp TTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTCTGCGTCAGACTCGAGATaGACCGCCTGCACCGCCTGC +
Preference number: 4 (lower is better)
Translates to: FIWVYFWVLSSVPLTYVSASDSR*TACTAC
Trigger: GCAGGCGGTGCAGGCGGTTCATCTCGAGTCTGACGC...AGACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCAACCGCCTGCACCACCTaGACCGCCATCTTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: QSLSLATINLFFISIILSTACTT*TAILAR
Trigger: TCGGGCCAAGATGGCGGTGCAGGTGGTGCAGGCGGT...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
CDS-3UTR GCA 90 bp AAGCATGAGCTACCATGCCTGACTTCAGTTGAGTTTTTAGTACACTTTATATATACCGCCTGCACCGCCTaGACCACCTGCACCGCCATC +
Preference number: 4 (lower is better)
Translates to: KHELPCLTSVEFLVHFIYTACTA*TTCTAI
Trigger: GATGGCGGTGCAGGTGGTGCAGGCGGTGCAGGCGGT...ATATATAAAGTGTACTAAAAACTCAACTGAAGTCAGGCATGGTAGCTCATGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
CDS-3UTR CCA 90 bp ATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCATTCCCTGCACCGCCATCTTaGCCCGACCCTTCTCACGTC +
Preference number: 4 (lower is better)
Translates to: IPLRYNQVLVSTVSSFSFPAPPS*PDPSHV
Trigger: GACGTGAGAAGGGTCGGGCCAAGATGGCGGTGCAGG...GAATGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369459.6
ENST00000369462.5
CDS-3UTR GCA 90 bp ATATTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGACCGCCTGCACCACCTaGACCGCCATCTTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: IFIWVYFWVLSSVPLTYVTACTT*TAILAR
Trigger: TCGGGCCAAGATGGCGGTGCAGGTGGTGCAGGCGGT...CACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
CDS-3UTR GCA 90 bp AAGCATGAGCTACCATGCCTGACTTCAGTTGAGTTTTTAGTACACTTTATATATACCGCCTGCACCACCTaGACCGCCATCTTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: KHELPCLTSVEFLVHFIYTACTT*TAILAR
Trigger: TCGGGCCAAGATGGCGGTGCAGGTGGTGCAGGCGGT...ATATATAAAGTGTACTAAAAACTCAACTGAAGTCAGGCATGGTAGCTCATGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
CDS-3UTR CCA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTCAGGTTGGAGTGTGGTaGTGTGATCACAGCTCACCG +
Preference number: 4 (lower is better)
Translates to: PLQSLSLATINLFFISIIQVGVW*CDHSSP
Trigger: CGGTGAGCTGTGATCACACCACCACACTCCAACCTG...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR TCA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTGCTCAGAGCGTGGTTaGGACAAACGAGGAAAGCGT +
Preference number: 4 (lower is better)
Translates to: PLQSLSLATINLFFISIICSERG*DKRGKR
Trigger: ACGCTTTCCTCGTTTGTCTCAACCACGCTCTGAGCA...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp ATAATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCACAGGTTGGAGTGTGGTaGTGTGATCACAGCTCACCG +
Preference number: 4 (lower is better)
Translates to: IIPLRYNQVLVSTVSSFSQVGVW*CDHSSP
Trigger: CGGTGAGCTGTGATCACACCACCACACTCCAACCTG...TGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp TTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTCTCAGGTTGGAGTGTGGTaGTGTGATCACAGCTCACCG +
Preference number: 4 (lower is better)
Translates to: FIWVYFWVLSSVPLTYVSQVGVW*CDHSSP
Trigger: CGGTGAGCTGTGATCACACCACCACACTCCAACCTG...AGACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp TTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTCTTGGAGATGTGCTGGCTaGAGCTCCAGAAGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: FIWVYFWVLSSVPLTYVSWRCAG*SSRSLV
Trigger: CACGAGACTTCTGGAGCTCCAGCCAGCACATCTCCA...AGACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369462.5
CDS-3UTR GCA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTGGTACATGGCTTGTGTaGGAACATCAACATGTGAAG +
Preference number: 4 (lower is better)
Translates to: PLQSLSLATINLFFISIIGTWLV*EHQHVK
Trigger: CTTCACATGTTGATGTTCGCACACAAGCCATGTACC...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp ATATTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGCCCTCAATGGAGATGTaGTGGCTGGAGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: IFIWVYFWVLSSVPLTYVPSMEM*WLELQK
Trigger: CTTCTGGAGCTCCAGCCAGCACATCTCCATTGAGGG...CACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369462.5
CDS-3UTR CCA 90 bp TTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTCTTGCCTCCCTAGTAGCTaGGACTACTGGTGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: FIWVYFWVLSSVPLTYVSCLPSS*DYWCVS
Trigger: TGACACACACCAGTAGTCCCAGCTACTAGGGAGGCA...AGACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTCCTTTTCAGCAACTGTaGGCATTTCAGTTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: PLQSLSLATINLFFISIIPFQQL*AFQFQY
Trigger: ATACTGGAACTGAAATGCGCACAGTTGCTGAAAAGG...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp TTCCCTGATGACTTATGGAGTTTAACAGCTTTTCATATGCTTACTTGCCATCTACTATCACCTCCCCTATaGACAGCCCCATTACTTCCT +
Preference number: 4 (lower is better)
Translates to: FPDDLWSLTAFHMLTCHLLSPPL*TAPLLP
Trigger: AGGAAGTAATGGGGCTGTGCATAGGGGAGGTGATAG...TAGATGGCAAGTAAGCATATGAAAAGCTGTTAAACTCCATAAGTCATCAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453705.1
CDS-3UTR CCA 90 bp ATATTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGAGTAGCTGGGACTACTaGTGTGTGTCATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: IFIWVYFWVLSSVPLTYVSSWDY*CVSWCP
Trigger: TGGGCACCATGACACACACCAGTAGTCCCAGCTACT...CACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTATCAATGGAGATGTGCTaGCTGGAGCTCCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVSMEMC*LELQKS
Trigger: AGACTTCTGGAGCTCCAGCCAGCACATCTCCATTGA...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369462.5
CDS-3UTR CCA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCACTTTCCTCTTCCTTCTaGCCCTCAATGGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: QSLSLATINLFFISIILSLSSSF*PSMEMC
Trigger: GCACATCTCCATTGAGGGCCAGAAGGAAGAGGAAAG...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369462.5
CDS-3UTR TCA 90 bp AAATTCATAAACTCTTTCCCAGAGTGGCTGTACCATTTTACATTCCTGTCAGCATCTCATCTGTTCCATTaGCGTATGTGTCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: KFINSFPEWLYHFTFLSASHLFH*RMCLFL
Trigger: GAGGAACAGACACATACGTCAATGGAACAGATGAGA...TGCTGACAGGAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTTTATGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR TCA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCAACCATGAAGGGACTCTaGACTCTTTTGGGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: QSLSLATINLFFISIILSTMKGL*TLLGLY
Trigger: ATACAGGCCCAAAAGAGTTCAGAGTCCCTTCATGGT...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369462.5
CDS-3UTR GCA 90 bp ATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCATTCGGTACATGGCTTGTGTaGGAACATCAACATGTGAAG +
Preference number: 4 (lower is better)
Translates to: IPLRYNQVLVSTVSSFSFGTWLV*EHQHVK
Trigger: CTTCACATGTTGATGTTCGCACACAAGCCATGTACC...GAATGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp AAATTCATAAACTCTTTCCCAGAGTGGCTGTACCATTTTACATTCCTGTCAGCAGTCCAGGAGCACAACTaGTGGGTCTTATGTTTAACT +
Preference number: 4 (lower is better)
Translates to: KFINSFPEWLYHFTFLSAVQEHN*WVLCLT
Trigger: AGTTAAACATAAGACCCAGCAGTTGTGCTCCTGGAC...TGCTGACAGGAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTTTATGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCAAGATGTGTAAGGCTGTaGATCCTCCTATACGCATCC +
Preference number: 4 (lower is better)
Translates to: QSLSLATINLFFISIILSRCVRL*ILLYAS
Trigger: GGATGCGTATAGGAGGATCCACAGCCTTACACATCT...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330045.12
ENST00000369462.5
ENST00000453705.1
CDS-3UTR TCA 90 bp TTCCCTGATGACTTATGGAGTTTAACAGCTTTTCATATGCTTACTTGCCATCTATCTCATCTGTTCCATTaGCGTATGTGTCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: FPDDLWSLTAFHMLTCHLSHLFH*RMCLFL
Trigger: GAGGAACAGACACATACGTCAATGGAACAGATGAGA...TAGATGGCAAGTAAGCATATGAAAAGCTGTTAAACTCCATAAGTCATCAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR TCA 90 bp AAATTCATAAACTCTTTCCCAGAGTGGCTGTACCATTTTACATTCCTGTCAGCATTCATTTCTCTGGAATaGATGTCCAGGAGCACAACT +
Preference number: 4 (lower is better)
Translates to: KFINSFPEWLYHFTFLSAFISLE*MSRSTT
Trigger: AGTTGTGCTCCTGGACATTCATTCCAGAGAAATGAA...TGCTGACAGGAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTTTATGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
3UTR CAA 72 bp TTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTaGTTTAACCATGTACCTGTTGTAGGACATCTGGGT +
Preference number: 4 (lower is better)
Translates to: FHSRAVFQVMDG*FNHVPVVGHLG
Trigger: ACCCAGATGTCCTACAACAGGTACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR TCA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCAGATTCTCTCATACTCTaGACTCTTTTGGGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: QSLSLATINLFFISIILSDSLIL*TLLGLY
Trigger: ATACAGGCCCAAAAGAGTTCAGAGTATGAGAGAATC...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330045.12
ENST00000453705.1
CDS-3UTR TCA 90 bp ATATTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTCTCATCTGTTCCATTaGCGTATGTGTCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: IFIWVYFWVLSSVPLTYVSHLFH*RMCLFL
Trigger: GAGGAACAGACACATACGTCAATGGAACAGATGAGA...CACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTACCTTTTCAGCAACTGTaGGCATTTCAGTTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVPFQQL*AFQFQY
Trigger: ATACTGGAACTGAAATGCGCACAGTTGCTGAAAAGG...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp TTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTCTCCTTTTCAGCAACTGTaGGCATTTCAGTTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: FIWVYFWVLSSVPLTYVSPFQQL*AFQFQY
Trigger: ATACTGGAACTGAAATGCGCACAGTTGCTGAAAAGG...AGACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp AAGCATGAGCTACCATGCCTGACTTCAGTTGAGTTTTTAGTACACTTTATATATGGTACATGGCTTGTGTaGGAACATCAACATGTGAAG +
Preference number: 4 (lower is better)
Translates to: KHELPCLTSVEFLVHFIYGTWLV*EHQHVK
Trigger: CTTCACATGTTGATGTTCGCACACAAGCCATGTACC...ATATATAAAGTGTACTAAAAACTCAACTGAAGTCAGGCATGGTAGCTCATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp AAATTCATAAACTCTTTCCCAGAGTGGCTGTACCATTTTACATTCCTGTCAGCACCATGGGTGTCTAATTaGTCTAGCATAATTTGTCAG +
Preference number: 4 (lower is better)
Translates to: KFINSFPEWLYHFTFLSAPWVSN*SSIICQ
Trigger: CTGACAAATTATGCTAGAGCAATTAGACACCCATGG...TGCTGACAGGAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTTTATGAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp TTCCCTGATGACTTATGGAGTTTAACAGCTTTTCATATGCTTACTTGCCATCTATGTCTTTTATGGATGTaGTTTCGGGGCAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: FPDDLWSLTAFHMLTCHLCLLWM*FRGKVQ
Trigger: TTGGACTTTGCCCCGAAAGCACATCCATAAAAGACA...TAGATGGCAAGTAAGCATATGAAAAGCTGTTAAACTCCATAAGTCATCAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp ATAATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCATGTCTTTTATGGATGTaGTTTCGGGGCAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: IIPLRYNQVLVSTVSSFSCLLWM*FRGKVQ
Trigger: TTGGACTTTGCCCCGAAAGCACATCCATAAAAGACA...TGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTATGTCTTTTATGGATGTaGTTTCGGGGCAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVCLLWM*FRGKVQ
Trigger: TTGGACTTTGCCCCGAAAGCACATCCATAAAAGACA...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp AAGCATGAGCTACCATGCCTGACTTCAGTTGAGTTTTTAGTACACTTTATATATGTCCAGGAGCACAACTaGTGGGTCTTATGTTTAACT +
Preference number: 4 (lower is better)
Translates to: KHELPCLTSVEFLVHFIYVQEHN*WVLCLT
Trigger: AGTTAAACATAAGACCCAGCAGTTGTGCTCCTGGAC...ATATATAAAGTGTACTAAAAACTCAACTGAAGTCAGGCATGGTAGCTCATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTCAGTATTCCAAGTTATaGATGGTTTGTTTAACCATG +
Preference number: 4 (lower is better)
Translates to: PLQSLSLATINLFFISIIQYSKL*MVCLTM
Trigger: CATGGTTAAACAAACCATCCATAACTTGGAATACTG...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR TCA 90 bp ATATTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGGATTCTCTCATACTCTaGACTCTTTTGGGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: IFIWVYFWVLSSVPLTYVDSLIL*TLLGLY
Trigger: ATACAGGCCCAAAAGAGTTCAGAGTATGAGAGAATC...CACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330045.12
ENST00000453705.1
CDS-3UTR TCA 90 bp ATAATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCAATTCTTGGTAAACACTaGGCCATTATGGATCTTGGT +
Preference number: 4 (lower is better)
Translates to: IIPLRYNQVLVSTVSSFSILGKH*AIMDLG
Trigger: ACCAAGATCCATAATGGCTCAGTGTTTACCAAGAAT...TGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTACCATGGGTGTCTAATTaGTCTAGCATAATTTGTCAG +
Preference number: 4 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVPWVSN*SSIICQ
Trigger: CTGACAAATTATGCTAGAGCAATTAGACACCCATGG...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp ATAATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCACCATGGGTGTCTAATTaGTCTAGCATAATTTGTCAG +
Preference number: 4 (lower is better)
Translates to: IIPLRYNQVLVSTVSSFSPWVSN*SSIICQ
Trigger: CTGACAAATTATGCTAGAGCAATTAGACACCCATGG...TGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR GCA 90 bp ATATTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTGTCTTTTATGGATGTaGTTTCGGGGCAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: IFIWVYFWVLSSVPLTYVCLLWM*FRGKVQ
Trigger: TTGGACTTTGCCCCGAAAGCACATCCATAAAAGACA...CACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp ATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCATTCATATGGGTTTATTTCTaGGTTCTCTCATCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: IPLRYNQVLVSTVSSFSFIWVYF*VLSSVP
Trigger: TGGAACAGATGAGAGAACCCAGAAATAAACCCATAT...GAATGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp TTCCCTGATGACTTATGGAGTTTAACAGCTTTTCATATGCTTACTTGCCATCTAAACTCTTTCCCAGAGTaGCTGTACCATTTTACATTC +
Preference number: 4 (lower is better)
Translates to: FPDDLWSLTAFHMLTCHLNSFPE*LYHFTF
Trigger: GAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTT...TAGATGGCAAGTAAGCATATGAAAAGCTGTTAAACTCCATAAGTCATCAGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTAAACTCTTTCCCAGAGTaGCTGTACCATTTTACATTC +
Preference number: 4 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVNSFPE*LYHFTF
Trigger: GAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTT...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp ATAATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCACAGTATATGCAAATTTaGAGTCACTCCTATCACCTC +
Preference number: 4 (lower is better)
Translates to: IIPLRYNQVLVSTVSSFSQYMQI*SHSYHL
Trigger: GAGGTGATAGGAGTGACTCCAAATTTGCATATACTG...TGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453705.1
CDS-3UTR TCA 90 bp ATATTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGATTCTTGGTAAACACTaGGCCATTATGGATCTTGGT +
Preference number: 4 (lower is better)
Translates to: IFIWVYFWVLSSVPLTYVILGKH*AIMDLG
Trigger: ACCAAGATCCATAATGGCTCAGTGTTTACCAAGAAT...CACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR TCA 90 bp AAGCATGAGCTACCATGCCTGACTTCAGTTGAGTTTTTAGTACACTTTATATATATTCTTGGTAAACACTaGGCCATTATGGATCTTGGT +
Preference number: 4 (lower is better)
Translates to: KHELPCLTSVEFLVHFIYILGKH*AIMDLG
Trigger: ACCAAGATCCATAATGGCTCAGTGTTTACCAAGAAT...ATATATAAAGTGTACTAAAAACTCAACTGAAGTCAGGCATGGTAGCTCATGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp AAATTCATAAACTCTTTCCCAGAGTGGCTGTACCATTTTACATTCCTGTCAGCACAGTATATGCAAATTTaGAGTCACTCCTTGTATCAT +
Preference number: 4 (lower is better)
Translates to: KFINSFPEWLYHFTFLSAQYMQI*SHSLYH
Trigger: ATGATACAAGGAGTGACTCCAAATTTGCATATACTG...TGCTGACAGGAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTTTATGAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
CDS-3UTR CCA 90 bp TTCCCTGATGACTTATGGAGTTTAACAGCTTTTCATATGCTTACTTGCCATCTAATATGGGTTTATTTCTaGGTTCTCTCATCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: FPDDLWSLTAFHMLTCHLIWVYF*VLSSVP
Trigger: TGGAACAGATGAGAGAACCCAGAAATAAACCCATAT...TAGATGGCAAGTAAGCATATGAAAAGCTGTTAAACTCCATAAGTCATCAGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp ATAATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCAATATGGGTTTATTTCTaGGTTCTCTCATCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: IIPLRYNQVLVSTVSSFSIWVYF*VLSSVP
Trigger: TGGAACAGATGAGAGAACCCAGAAATAAACCCATAT...TGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp ATATTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGAACTCTTTCCCAGAGTaGCTGTACCATTTTACATTC +
Preference number: 4 (lower is better)
Translates to: IFIWVYFWVLSSVPLTYVNSFPE*LYHFTF
Trigger: GAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTT...CACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp AAGCATGAGCTACCATGCCTGACTTCAGTTGAGTTTTTAGTACACTTTATATATAACTCTTTCCCAGAGTaGCTGTACCATTTTACATTC +
Preference number: 4 (lower is better)
Translates to: KHELPCLTSVEFLVHFIYNSFPE*LYHFTF
Trigger: GAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTT...ATATATAAAGTGTACTAAAAACTCAACTGAAGTCAGGCATGGTAGCTCATGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp ATATTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGATATGGGTTTATTTCTaGGTTCTCTCATCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: IFIWVYFWVLSSVPLTYVIWVYF*VLSSVP
Trigger: TGGAACAGATGAGAGAACCCAGAAATAAACCCATAT...CACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp TTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTCTCAGTATTCCAAGTTATaGATGGTTTGTTTAACCATG +
Preference number: 4 (lower is better)
Translates to: FIWVYFWVLSSVPLTYVSQYSKL*MVCLTM
Trigger: CATGGTTAAACAAACCATCCATAACTTGGAATACTG...AGACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTACAGTATTCCAAGTTATaGATGGTTTGTTTAACCATG +
Preference number: 4 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVQYSKL*MVCLTM
Trigger: CATGGTTAAACAAACCATCCATAACTTGGAATACTG...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp ATATTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGCTGAGCATATTTATATaGGTTTATTTCTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: IFIWVYFWVLSSVPLTYVLSIFI*VYFWVL
Trigger: GAGAACCCAGAAATAAACCCATATAAATATGCTCAG...CACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAATAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CCA 90 bp AAGCATGAGCTACCATGCCTGACTTCAGTTGAGTTTTTAGTACACTTTATATATCTGAGCATATTTATATaGGTTTATTTCTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: KHELPCLTSVEFLVHFIYLSIFI*VYFWVL
Trigger: GAGAACCCAGAAATAAACCCATATAAATATGCTCAG...ATATATAAAGTGTACTAAAAACTCAACTGAAGTCAGGCATGGTAGCTCATGCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS CCA 90 bp GGATTTCGATTCTCTCATACCTTTCCTCTTCCTTCTGGCCCTCAATaGAGATGTGCTGGCTGGAGCTCCAGAAGTCTCGTGGACCATGAA +
Preference number: 5 (lower is better)
Translates to: GFRFSHTFPLPSGPQ*RCAGWSSRSLVDHE
Trigger: TTCATGGTCCACGAGACTTCTGGAGCTCCAGCCAGCACATCTCCATTGAGGGCCAGAAGGAAGAGGAAAGGTATGAGAGAATCGAAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369462.5
ENST00000399042.4
ENST00000411985.5
ENST00000630295.1
CDS-3UTR CAA 90 bp TTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTCTACCTGCACCGCCATCTaGGCCCGACCCTTCTCACGT +
Preference number: 5 (lower is better)
Translates to: FIWVYFWVLSSVPLTYVSTCTAI*ARPFSR
Trigger: ACGTGAGAAGGGTCGGGCCAAGATGGCGGTGCAGGT...AGACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369459.6
ENST00000369462.5
CDS-3UTR CAA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCAACCTGCACCGCCATCTaGGCCCGACCCTTCTCACGT +
Preference number: 5 (lower is better)
Translates to: QSLSLATINLFFISIILSTCTAI*ARPFSR
Trigger: ACGTGAGAAGGGTCGGGCCAAGATGGCGGTGCAGGT...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369459.6
ENST00000369462.5
CDS GCA 90 bp GGCATCAACCTTTTCAGCAACTGTGCGCATTTCAGTTCCAGTATATaGAAATTTGGAGTCACTCCTTGTATCATCGTTCAACTCCCCTAT +
Preference number: 5 (lower is better)
Translates to: GINLFSNCAHFSSSI*KFGVTPCIIVQLPY
Trigger: ATAGGGGAGTTGAACGATGATACAAGGAGTGACTCCAAATTTGCATATACTGGAACTGAAATGCGCACAGTTGCTGAAAAGGTTGATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000399042.4
CDS-3UTR CAA 90 bp ATACCCCTGAGGTACAACCAAGTTCTTGTATCAACAGTTAGTTCCTTTTCATTCACTCTGTTACACAGGTaGGAGTGTGGTGGTGTGATC +
Preference number: 5 (lower is better)
Translates to: IPLRYNQVLVSTVSSFSFTLLHR*ECGGVI
Trigger: GATCACACCACCACACTCCAACCTGTGTAACAGAGT...GAATGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp TTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTCTACTCTGTTACACAGGTaGGAGTGTGGTGGTGTGATC +
Preference number: 5 (lower is better)
Translates to: FIWVYFWVLSSVPLTYVSTLLHR*ECGGVI
Trigger: GATCACACCACCACACTCCAACCTGTGTAACAGAGT...AGACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTAACTCTGTTACACAGGTaGGAGTGTGGTGGTGTGATC +
Preference number: 5 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVTLLHR*ECGGVI
Trigger: GATCACACCACCACACTCCAACCTGTGTAACAGAGT...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp TTCCCTGATGACTTATGGAGTTTAACAGCTTTTCATATGCTTACTTGCCATCTATGTAGGACATCTGGGTaGTTTCCAGTTTGGGGCTAT +
Preference number: 5 (lower is better)
Translates to: FPDDLWSLTAFHMLTCHLCRTSG*FPVWGY
Trigger: ATAGCCCCAAACTGGAAACAACCCAGATGTCCTACA...TAGATGGCAAGTAAGCATATGAAAAGCTGTTAAACTCCATAAGTCATCAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCATGTAGGACATCTGGGTaGTTTCCAGTTTGGGGCTAT +
Preference number: 5 (lower is better)
Translates to: QSLSLATINLFFISIILSCRTSG*FPVWGY
Trigger: ATAGCCCCAAACTGGAAACAACCCAGATGTCCTACA...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTATGTAGGACATCTGGGTaGTTTCCAGTTTGGGGCTAT +
Preference number: 5 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVCRTSG*FPVWGY
Trigger: ATAGCCCCAAACTGGAAACAACCCAGATGTCCTACA...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp CCCCTCCAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTGGTACAACCAAGTTCTaGTATCAACAGTTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: PLQSLSLATINLFFISIIGTTKF*YQQLVP
Trigger: AGGAACTAACTGTTGATACAAGAACTTGGTTGTACC...AATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTAGCACAAAGGAACTCCTaGCGTCATCCCTTTATAGTC +
Preference number: 5 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVAQRNS*RHPFIV
Trigger: GACTATAAAGGGATGACGCAAGGAGTTCCTTTGTGC...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCAGCACAAAGGAACTCCTaGCGTCATCCCTTTATAGTC +
Preference number: 5 (lower is better)
Translates to: QSLSLATINLFFISIILSAQRNS*RHPFIV
Trigger: GACTATAAAGGGATGACGCAAGGAGTTCCTTTGTGC...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp TTCCCTGATGACTTATGGAGTTTAACAGCTTTTCATATGCTTACTTGCCATCTAGCACAAAGGAACTCCTaGCGTCATCCCTTTATAGTC +
Preference number: 5 (lower is better)
Translates to: FPDDLWSLTAFHMLTCHLAQRNS*RHPFIV
Trigger: GACTATAAAGGGATGACGCAAGGAGTTCCTTTGTGC...TAGATGGCAAGTAAGCATATGAAAAGCTGTTAAACTCCATAAGTCATCAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp AAATTCATAAACTCTTTCCCAGAGTGGCTGTACCATTTTACATTCCTGTCAGCACGCTGTGGTTTCAATTaGCATTCCCTGATGACTTAT +
Preference number: 5 (lower is better)
Translates to: KFINSFPEWLYHFTFLSARCGFN*HSLMTY
Trigger: ATAAGTCATCAGGGAATGCAAATTGAAACCACAGCG...TGCTGACAGGAATGTAAAATGGTACAGCCACTCTGGGAAAGAGTTTATGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp AAGCATGAGCTACCATGCCTGACTTCAGTTGAGTTTTTAGTACACTTTATATATGCACAAAGGAACTCCTaGCGTCATCCCTTTATAGTC +
Preference number: 5 (lower is better)
Translates to: KHELPCLTSVEFLVHFIYAQRNS*RHPFIV
Trigger: GACTATAAAGGGATGACGCAAGGAGTTCCTTTGTGC...ATATATAAAGTGTACTAAAAACTCAACTGAAGTCAGGCATGGTAGCTCATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp TTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTCTCGCTGTGGTTTCAATTaGCATTCCCTGATGACTTAT +
Preference number: 5 (lower is better)
Translates to: FIWVYFWVLSSVPLTYVSRCGFN*HSLMTY
Trigger: ATAAGTCATCAGGGAATGCAAATTGAAACCACAGCG...AGACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp TTTATATGGGTTTATTTCTGGGTTCTCTCATCTGTTCCATTGACGTATGTGTCTTGGGTTGTTTCCAGTTaGGGGCTATTACAAATAAAG +
Preference number: 5 (lower is better)
Translates to: FIWVYFWVLSSVPLTYVSWVVSS*GLLQIK
Trigger: CTTTATTTGTAATAGCCCCAAACTGGAAACAACCCA...AGACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTATGGGTTGTTTCCAGTTaGGGGCTATTACAAATAAAG +
Preference number: 5 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVWVVSS*GLLQIK
Trigger: CTTTATTTGTAATAGCCCCAAACTGGAAACAACCCA...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp CAGTCCCTATCCCTGGCAACCATTAATCTGTTCTTCATTTCAATAATTTTGTCAGGTACAACCAAGTTCTaGTATCAACAGTTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: QSLSLATINLFFISIILSGTTKF*YQQLVP
Trigger: AGGAACTAACTGTTGATACAAGAACTTGGTTGTACC...TGACAAAATTATTGAAATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp CCTTTTCATTCCAGAGCAGTATTCCAAGTTATGGATGGTTTGTTTAACCATGTAGGTACAACCAAGTTCTaGTATCAACAGTTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: PFHSRAVFQVMDGLFNHVGTTKF*YQQLVP
Trigger: AGGAACTAACTGTTGATACAAGAACTTGGTTGTACC...TACATGGTTAAACAAACCATCCATAACTTGGAATACTGCTCTGGAATGAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp AAGCATGAGCTACCATGCCTGACTTCAGTTGAGTTTTTAGTACACTTTATATATTGGGTTGTTTCCAGTTaGGGGCTATTACAAATAAAG +
Preference number: 5 (lower is better)
Translates to: KHELPCLTSVEFLVHFIYWVVSS*GLLQIK
Trigger: CTTTATTTGTAATAGCCCCAAACTGGAAACAACCCA...ATATATAAAGTGTACTAAAAACTCAACTGAAGTCAGGCATGGTAGCTCATGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS-3UTR CAA 90 bp AAGCATGAGCTACCATGCCTGACTTCAGTTGAGTTTTTAGTACACTTTATATATGGTACAACCAAGTTCTaGTATCAACAGTTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: KHELPCLTSVEFLVHFIYGTTKF*YQQLVP
Trigger: AGGAACTAACTGTTGATACAAGAACTTGGTTGTACC...ATATATAAAGTGTACTAAAAACTCAACTGAAGTCAGGCATGGTAGCTCATGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000453705.1
CDS CAA 90 bp ACCGCCATCTTGGCCCGACCCTTCTCACGTCCGCCTCGGGCCCACTaGGTCCTGACCAACCGGGTGCTGCGGCGCAGCCTCCCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: TAILARPFSRPPRAH*VLTNRVLRRSLPSA
Trigger: GGCGCTGGGGAGGCTGCGCCGCAGCACCCGGTTGGTCAGGACCAAGTGGGCCCGAGGCGGACGTGAGAAGGGTCGGGCCAAGATGGCGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340647.8
CDS CAA 72 bp TTGGCCCGACCCTTCTCACGTCCGCCTCGGGCCCACTaGGTCCTGACCAACCGGGTGCTGCGGCGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: LARPFSRPPRAH*VLTNRVLRRSL
Trigger: GAGGCTGCGCCGCAGCACCCGGTTGGTCAGGACCAAGTGGGCCCGAGGCGGACGTGAGAAGGGTCGGGCCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340647.8
CDS CCA 72 bp CCTCTTCCTTCTGGCCCTCAATGGAGATGTGCTGGCTaGAGCTCCAGAAGTCTCGTGGACCATGAAGGGACT +
Preference number: 6 (lower is better)
Translates to: PLPSGPQWRCAG*SSRSLVDHEGT
Trigger: AGTCCCTTCATGGTCCACGAGACTTCTGGAGCTCCAGCCAGCACATCTCCATTGAGGGCCAGAAGGAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369462.5
ENST00000399042.4
ENST00000411985.5
ENST00000630295.1
CDS CCA 72 bp TTCTCTCATACCTTTCCTCTTCCTTCTGGCCCTCAATaGAGATGTGCTGGCTGGAGCTCCAGAAGTCTCGTG +
Preference number: 6 (lower is better)
Translates to: FSHTFPLPSGPQ*RCAGWSSRSLV
Trigger: CACGAGACTTCTGGAGCTCCAGCCAGCACATCTCCATTGAGGGCCAGAAGGAAGAGGAAAGGTATGAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369462.5
ENST00000399042.4
ENST00000411985.5
ENST00000630295.1
CDS CCA 72 bp GGGATTTCGATTCTCTCATACCTTTCCTCTTCCTTCTaGCCCTCAATGGAGATGTGCTGGCTGGAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: GISILSYLSSSF*PSMEMCWLELQ
Trigger: CTGGAGCTCCAGCCAGCACATCTCCATTGAGGGCCAGAAGGAAGAGGAAAGGTATGAGAGAATCGAAATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369462.5
ENST00000399042.4
ENST00000411985.5
ENST00000630295.1
CDS CCA 72 bp CAGTTCCAGTATATGCAAATTTGGAGTCACTCCTACTaGGACTACTCACCTCCCCTATGCACAGCCCCATTA +
Preference number: 6 (lower is better)
Translates to: QFQYMQIWSHSY*DYSPPLCTAPL
Trigger: TAATGGGGCTGTGCATAGGGGAGGTGAGTAGTCCCAGTAGGAGTGACTCCAAATTTGCATATACTGGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630295.1
CDS CAA 72 bp GCAACTGTGCGCATTTCAGTTCCAGTATATGCAAATTaGGAGTCACTCCTATCACCTCCCCTATGCACAGCC +
Preference number: 6 (lower is better)
Translates to: ATVRISVPVYAN*ESLLSPPLCTA
Trigger: GGCTGTGCATAGGGGAGGTGATAGGAGTGACTCCAAATTTGCATATACTGGAACTGAAATGCGCACAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453705.1
CDS CAA 72 bp GCAACTGTGCGCATTTCAGTTCCAGTATATGCAAATTaGGAGTCACTCCTACTGGGACTACTCACCTCCCCT +
Preference number: 6 (lower is better)
Translates to: ATVRISVPVYAN*ESLLLGLLTSP
Trigger: AGGGGAGGTGAGTAGTCCCAGTAGGAGTGACTCCAAATTTGCATATACTGGAACTGAAATGCGCACAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630295.1
CDS CAA 90 bp ACCTTTTCAGCAACTGTGCGCATTTCAGTTCCAGTATATGCAAATTaGGAGTCACTCCTACTGGGACTACTCACCTCCCCTATGCACAGC +
Preference number: 6 (lower is better)
Translates to: TFSATVRISVPVYAN*ESLLLGLLTSPMHS
Trigger: GCTGTGCATAGGGGAGGTGAGTAGTCCCAGTAGGAGTGACTCCAAATTTGCATATACTGGAACTGAAATGCGCACAGTTGCTGAAAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630295.1
CDS CCA 72 bp CAACTGTGCGCATTTCAGTTCCAGTATATGCAAATTTaGAGTCACTCCTACTGGGACTACTCACCTCCCCTA +
Preference number: 6 (lower is better)
Translates to: QLCAFQFQYMQI*SHSYWDYSPPL
Trigger: TAGGGGAGGTGAGTAGTCCCAGTAGGAGTGACTCCAAATTTGCATATACTGGAACTGAAATGCGCACAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630295.1
CDS CAA 72 bp CAGTTCCAGTATATGCAAATTTGGAGTCACTCCTACTaGTATCATCGTTCAACTCCCCTATGCACAGCCCCA +
Preference number: 6 (lower is better)
Translates to: QFQYMQIWSHSY*YHRSTPLCTAP
Trigger: TGGGGCTGTGCATAGGGGAGTTGAACGATGATACAAGTAGGAGTGACTCCAAATTTGCATATACTGGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340647.8
ENST00000620502.4
CDS CAA 90 bp ACCTTTTCAGCAACTGTGCGCATTTCAGTTCCAGTATATGCAAATTaGGAGTCACTCCTTGTATCATCGTTCAACTCCCCTATGCACAGC +
Preference number: 6 (lower is better)
Translates to: TFSATVRISVPVYAN*ESLLVSSFNSPMHS
Trigger: GCTGTGCATAGGGGAGTTGAACGATGATACAAGGAGTGACTCCAAATTTGCATATACTGGAACTGAAATGCGCACAGTTGCTGAAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000399042.4
CDS GCA 72 bp CTTTTCAGCAACTGTGCGCATTTCAGTTCCAGTATATaGAAATTTGGAGTCACTCCTATCACCTCCCCTATG +
Preference number: 6 (lower is better)
Translates to: LFSNCAHFSSSI*KFGVTPITSPM
Trigger: CATAGGGGAGGTGATAGGAGTGACTCCAAATTTGCATATACTGGAACTGAAATGCGCACAGTTGCTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453705.1
CDS CAA 72 bp TTTCAGTTCCAGTATATGCAAATTTGGAGTCACTCCTaGTATCATCGTTCAACTCCCCTATGCACAGCCCCA +
Preference number: 6 (lower is better)
Translates to: FQFQYMQIWSHS*YHRSTPLCTAP
Trigger: TGGGGCTGTGCATAGGGGAGTTGAACGATGATACAAGGAGTGACTCCAAATTTGCATATACTGGAACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000399042.4
CDS CAA 72 bp GCAACTGTGCGCATTTCAGTTCCAGTATATGCAAATTaGGAGTCACTCCTTGTATCATCGTTCAACTCCCCT +
Preference number: 6 (lower is better)
Translates to: ATVRISVPVYAN*ESLLVSSFNSP
Trigger: AGGGGAGTTGAACGATGATACAAGGAGTGACTCCAAATTTGCATATACTGGAACTGAAATGCGCACAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000399042.4
CDS CAA 90 bp ACCTTTTCAGCAACTGTGCGCATTTCAGTTCCAGTATATGCAAATTaGGAGTCACTCCTACTTGTATCATCGTTCAACTCCCCTATGCAC +
Preference number: 6 (lower is better)
Translates to: TFSATVRISVPVYAN*ESLLLVSSFNSPMH
Trigger: GTGCATAGGGGAGTTGAACGATGATACAAGTAGGAGTGACTCCAAATTTGCATATACTGGAACTGAAATGCGCACAGTTGCTGAAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340647.8
ENST00000620502.4
CDS CCA 72 bp CAACTGTGCGCATTTCAGTTCCAGTATATGCAAATTTaGAGTCACTCCTACTTGTATCATCGTTCAACTCCC +
Preference number: 6 (lower is better)
Translates to: QLCAFQFQYMQI*SHSYLYHRSTP
Trigger: GGGAGTTGAACGATGATACAAGTAGGAGTGACTCCAAATTTGCATATACTGGAACTGAAATGCGCACAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340647.8
ENST00000620502.4
CDS CCA 72 bp CAACTGTGCGCATTTCAGTTCCAGTATATGCAAATTTaGAGTCACTCCTTGTATCATCGTTCAACTCCCCTA +
Preference number: 6 (lower is better)
Translates to: QLCAFQFQYMQI*SHSLYHRSTPL
Trigger: TAGGGGAGTTGAACGATGATACAAGGAGTGACTCCAAATTTGCATATACTGGAACTGAAATGCGCACAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330045.12
ENST00000369459.6
ENST00000369462.5
ENST00000399042.4
CDS CAA 72 bp GCAACTGTGCGCATTTCAGTTCCAGTATATGCAAATTaGGAGTCACTCCTACTTGTATCATCGTTCAACTCC +
Preference number: 6 (lower is better)
Translates to: ATVRISVPVYAN*ESLLLVSSFNS
Trigger: GGAGTTGAACGATGATACAAGTAGGAGTGACTCCAAATTTGCATATACTGGAACTGAAATGCGCACAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340647.8
ENST00000620502.4