RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRCA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000139618

Ensembl transcript IDs: ENST00000380152.8, ENST00000470094.1, ENST00000528762.1, ENST00000530893.6, ENST00000544455.6, ENST00000614259.2, ENST00000665585.1, ENST00000666593.1, ENST00000680887.1

Found 976 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGGCTTCAAGAGGTGTACAGGCATCAGGAGAGCCCACCAGTTCTaGTCCATGAAGAATAATCTTCTGACCAACTGTCAGTCTGCCATT +
Preference number: 1 (lower is better)
Translates to: WGFKRCTGIRRAHQF*SMKNNLLTNCQSAI
Trigger: AATGGCAGACTGACAGTTGGTCAGAAGATTATTCTTCATGGAGCAGAACTGGTGGGCTCTCCTGATGCCTGTACACCTCTTGAAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR GCA 90 bp TTCGTATTTGGTGCCACAACTCCTTGGTGGCTGAAATGCCTTCTGTaGAGCCGGAGAAACAAATGTACAAATGGGACTAACAGGTGGAGG +
Preference number: 1 (lower is better)
Translates to: FVFGATTPWWLKCLL*SRRNKCTNGTNRWR
Trigger: CCTCCACCTGTTAGTCCCATTTGTACATTTGTTTCTCCGGCTGCACAGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACCAAATACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR TCA 90 bp AAGCTTGTTTCCTGTACCAGGAATGATTTGAGCAGTGTACGGCCCTaGAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGC +
Preference number: 1 (lower is better)
Translates to: KLVSCTRNDLSSVRP*STVFSWGGPLGIIC
Trigger: GCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGGCCGTACACTGCTCAAATCATTCCTGGTACAGGAAACAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
3UTR TCA 90 bp TTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTaGGCAGTGTACGGCCCTGAAGTACAGTCTTTAGTTGGGGTGGAC +
Preference number: 1 (lower is better)
Translates to: LGEDIRSLFPVPGMI*AVYGPEVQSLVGVD
Trigger: GTCCACCCCAACTAAAGACTGTACTTCAGGGCCGTACACTGCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
3UTR GCA 90 bp TATGGGTGTTTCGTATTTGGTGCCACAACTCCTTGGTGGCTGAAATaGCTTCTGTGCAGCCGGAGAAACAAATGTACAAATGGGACTAAC +
Preference number: 1 (lower is better)
Translates to: YGCFVFGATTPWWLK*LLCSRRNKCTNGTN
Trigger: GTTAGTCCCATTTGTACATTTGTTTCTCCGGCTGCACAGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACCAAATACGAAACACCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR CCA 90 bp GTCAGTCTGCCATTCTTTAAGACAGCTAAGAGGGGAGGATCTAACTaGGCCTTAACAGCATACCACCCATCTGTAAGTTCAATAATGGCC +
Preference number: 1 (lower is better)
Translates to: VSLPFFKTAKRGGSN*ALTAYHPSVSSIMA
Trigger: GGCCATTATTGAACTTACAGATGGGTGGTATGCTGTTAAGGCCCAGTTAGATCCTCCCCTCTTAGCTGTCTTAAAGAATGGCAGACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR TCA 90 bp TTCTTTATGGGTGTTTCGTATTTGGTGCCACAACTCCTTGGTGGCTaGAATGCCTTCTGTGCAGCCGGAGAAACAAATGTACAAATGGGA +
Preference number: 1 (lower is better)
Translates to: FFMGVSYLVPQLLGG*NAFCAAGETNVQMG
Trigger: TCCCATTTGTACATTTGTTTCTCCGGCTGCACAGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACCAAATACGAAACACCCATAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR CCA 90 bp TGGTCATCAATCTCTTTCTCCCCTTTACAAGACTTTGAAGTCATCTaGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAA +
Preference number: 1 (lower is better)
Translates to: WSSISFSPLQDFEVI*AETGVETDFLLAIQ
Trigger: TTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGACTTCAAAGTCTTGTAAAGGGGAGAAAGAGATTGATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR CCA 90 bp GTAATTGTGTCCTGCTTATTTTTCTCACATTCTTCCGTACTGGCCTaGGAACTCTCCTGTTCTTTGATCAGAGATGTAGTACAACGTCGT +
Preference number: 1 (lower is better)
Translates to: VIVSCLFFSHSSVLA*ELSCSLIRDVVQRR
Trigger: ACGACGTTGTACTACATCTCTGATCAAAGAACAGGAGAGTTCCCAGGCCAGTACGGAAGAATGTGAGAAAAATAAGCAGGACACAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR CCA 90 bp AAAGGGGCAAGTCTGTCATTCTGTCATCACGATGGTCATGTTTCCTaGAAATTTCAGTATCCTCACAGGCAATCCTTCCAATACTCTGTT +
Preference number: 1 (lower is better)
Translates to: KGASLSFCHHDGHVS*KFQYPHRQSFQYSV
Trigger: AACAGAGTATTGGAAGGATTGCCTGTGAGGATACTGAAATTTCCAGGAAACATGACCATCGTGATGACAGAATGACAGACTTGCCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666593.1
3UTR TCA 90 bp GATCAGAGATGTAGTACAACGTCGTTTCAGTCTGAGATAATCTTCTaGACTGGTGGGAGCAGTCCTAGTGGATTCACTGACAGATATAAA +
Preference number: 1 (lower is better)
Translates to: DQRCSTTSFQSEIIF*TGGSSPSGFTDRYK
Trigger: TTTATATCTGTCAGTGAATCCACTAGGACTGCTCCCACCAGTTCAGAAGATTATCTCAGACTGAAACGACGTTGTACTACATCTCTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR GCA 90 bp GAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATaGAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATG +
Preference number: 1 (lower is better)
Translates to: EVQSLVGVDHLGSFA*SICISLFSASLQSM
Trigger: CATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
3UTR TCA 90 bp TTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATaGGGCTTAATAATGTCCTCATTAAGGTCTATCCAAAACTTTATT +
Preference number: 1 (lower is better)
Translates to: LDSGRHWRLLAAINI*GLIMSSLRSIQNFI
Trigger: AATAAAGTTTTGGATAGACCTTAATGAGGACATTATTAAGCCTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614259.2
ENST00000665585.1
ENST00000666593.1
3UTR GCA 90 bp TCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATaGATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGTCAATATTC +
Preference number: 1 (lower is better)
Translates to: SLVGVDHLGSFACSI*ISLFSASLQSMSIF
Trigger: GAATATTGACATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
3UTR TCA 90 bp AATTGCTCAAAAGGAAACACCACTCTTCATATTCATCCTGACTTTTaGACAGGATGGAACTATAGCAGAACCAACATATTTGCATTAAGG +
Preference number: 1 (lower is better)
Translates to: NCSKGNTTLHIHPDF*TGWNYSRTNIFALR
Trigger: CCTTAATGCAAATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAAGAGTGGTGTTTCCTTTTGAGCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
3UTR TCA 90 bp AGTCCTAGTGGATTCACTGACAGATATAAATTGTTTTTCTCCTGTTaGACCAGACAAAAGAGCTTGGGTATTTATCAATGCAAGTTCTTC +
Preference number: 1 (lower is better)
Translates to: SPSGFTDRYKLFFSC*TRQKSLGIYQCKFF
Trigger: GAAGAACTTGCATTGATAAATACCCAAGCTCTTTTGTCTGGTTCAACAGGAGAAAAACAATTTATATCTGTCAGTGAATCCACTAGGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR GCA 90 bp ATACCACCCATCTGTAAGTTCAATAATGGCCACTTTTTGGGTATCTaGACTACTAGTTTTATTGCTAGAAGTTTCAGATATATTTGCGCT +
Preference number: 1 (lower is better)
Translates to: IPPICKFNNGHFLGI*TTSFIARSFRYICA
Trigger: AGCGCAAATATATCTGAAACTTCTAGCAATAAAACTAGTAGTGCAGATACCCAAAAAGTGGCCATTATTGAACTTACAGATGGGTGGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR CCA 90 bp TTAACAGCATACCACCCATCTGTAAGTTCAATAATGGCCACTTTTTaGGTATCTGCACTACTAGTTTTATTGCTAGAAGTTTCAGATATA +
Preference number: 1 (lower is better)
Translates to: LTAYHPSVSSIMATF*VSALLVLLLEVSDI
Trigger: TATATCTGAAACTTCTAGCAATAAAACTAGTAGTGCAGATACCCAAAAAGTGGCCATTATTGAACTTACAGATGGGTGGTATGCTGTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACACTGCACTCCAGCATaGGCGACAAAGCAAGACTCC +
Preference number: 2 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPHCTPA*ATKQDS
Trigger: GGAGTCTTGCTTTGTCGCCCATGCTGGAGTGCAGTG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
3UTR-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAACCCTCAAGGTAAGCTaGGTCTGCTGCATTCTTCAC +
Preference number: 2 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPTLKVS*VCCILH
Trigger: GTGAAGAATGCAGCAGACCCAGCTTACCTTGAGGGT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAATTCATCCTGACTTTTaGACAGGATGGAACTATAGC +
Preference number: 2 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPIHPDF*TGWNYS
Trigger: GCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAAT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
3UTR-3UTR GCA 90 bp AGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGCAGTGTACGGCCCAGTGAGCCAGGATCATaGCACTGCACTCCAGCATGG +
Preference number: 2 (lower is better)
Translates to: RHQKLVSCTRNDLSSVRPSEPGS*HCTPAW
Trigger: CCATGCTGGAGTGCAGTGGCATGATCCTGGCTCACT...GGGCCGTACACTGCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACCGATACACAAACGCTaGGGTAAATTTGAAACTAAT +
Preference number: 2 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPPIHKR*GKFETN
Trigger: ATTAGTTTCAAATTTACCTCAGCGTTTGTGTATCGG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
3UTR-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATCTTCATATTCATCCTaGCTTTTGAACAGGATGGAA +
Preference number: 2 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSSYSS*LLNRME
Trigger: TTCCATCCTGTTCAAAAGTCAGGATGAATATGAAGA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
3UTR-3UTR TCA 90 bp TCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGGTACCAGGAATGATTTaGGCAGTGTACGGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: SSGLRQVWKQTSFWPYKVVPGMI*AVYGPE
Trigger: TTCAGGGCCGTACACTGCTCAAATCATTCCTGGTAC...CACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470094.1
ENST00000614259.2
3UTR-3UTR TCA 90 bp AGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGCAGTGTACGGCCCTTCCTGTACCAGGAATaGTTTGAGCAGTGTACGGCC +
Preference number: 2 (lower is better)
Translates to: RHQKLVSCTRNDLSSVRPFLYQE*FEQCTA
Trigger: GGCCGTACACTGCTCAAATCATTCCTGGTACAGGAA...GGGCCGTACACTGCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTAAGGATGAAGAATTaGTCAAAAGGAAACACCACT +
Preference number: 2 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPLRMKN*SKGNTT
Trigger: AGTGGTGTTTCCTTTTGAGCAATTCTTCATCCTTAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
3UTR-3UTR GCA 90 bp TCTCCAGCAAATAAAGTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGGGGCAGTTTCTCCCATaGTGTTCCATGATAGTGAGG +
Preference number: 2 (lower is better)
Translates to: SPANKVRRPDLDSGRHWRGQFLP*CSMIVR
Trigger: CCTCACTATCATGGAACAGCATGGGAGAAACTGCCC...CCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACTTTATTTGCTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000665585.1
3UTR-3UTR CCA 90 bp AGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGCAGTGTACGGCCCAGTACAGTCTTTAGTTaGGGTGGACCACTTGGGATC +
Preference number: 2 (lower is better)
Translates to: RHQKLVSCTRNDLSSVRPSTVFS*GGPLGI
Trigger: GATCCCAAGTGGTCCACCCCAACTAAAGACTGTACT...GGGCCGTACACTGCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
3UTR CAA 90 bp GCAGTGTACGGCCCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTaGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCT +
Preference number: 2 (lower is better)
Translates to: AVYGPEVQSLVGVDH*GSFACSICISLFSA
Trigger: AGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGGCCGTACACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
3UTR CAA 90 bp GATAAGGGCAGAGGAAAAGGTCTAGGGTCAGGAAAGAATCCAAGTTaGGTATACCAGCGAGCAGGCCGAGTACTGTTAGCAGAAATCTTT +
Preference number: 2 (lower is better)
Translates to: DKGRGKGLGSGKNPS*VYQRAGRVLLAEIF
Trigger: AAAGATTTCTGCTAACAGTACTCGGCCTGCTCGCTGGTATACCAAACTTGGATTCTTTCCTGACCCTAGACCTTTTCCTCTGCCCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR-3UTR CCA 90 bp AATAAAGTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAAGTACAGTCTTTAGTTaGGGTGGACCACTTGGGATC +
Preference number: 2 (lower is better)
Translates to: NKVRRPDLDSGRHWRLLASTVFS*GGPLGI
Trigger: GATCCCAAGTGGTCCACCCCAACTAAAGACTGTACT...TGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACTTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR TCA 90 bp GACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCAAAAAATTTGCTGAAGTaGAGGGGCTCCCGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: DHLGSFACSICISLFSASKNLLK*RGSRGW
Trigger: CCAGCCACGGGAGCCCCTTCACTTCAGCAAATTTTT...TGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR GCA 90 bp ATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGGCTTGCAAAGCACGAACTTaGTGTCTTGTTAGTGCACGT +
Preference number: 2 (lower is better)
Translates to: IWILVATGGCLQQLTYEACKART*CLVSAR
Trigger: ACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCA...AGCCTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR CCA 90 bp CTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGATAAAGGACTTGGGGTGGACCACTTaGGATCATTTGCATGCAGTA +
Preference number: 2 (lower is better)
Translates to: LRQVWKQTSFWPYKVIKDLGWTT*DHLHAV
Trigger: TACTGCATGCAAATGATCCCAAGTGGTCCACCCCAA...GTCCTTTATCACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470094.1
ENST00000614259.2
3UTR-3UTR TCA 90 bp CTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGCAGTGTACGGCCCTaGAGTACAGTCTTTAGTTGG +
Preference number: 2 (lower is better)
Translates to: LTIRRRHQKLVSCTRNDLSSVRP*STVFSW
Trigger: CCAACTAAAGACTGTACTTCAGGGCCGTACACTGCT...CAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR CCA 90 bp TCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTACCCTCAAGGTAAGCTaGGTCTGCTGCATTCTTCAC +
Preference number: 2 (lower is better)
Translates to: SLDKPCSFCSADSMAFLITLKVS*VCCILH
Trigger: GTGAAGAATGCAGCAGACCCAGCTTACCTTGAGGGT...AATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR CCA 90 bp CTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTGAAAGAATCCAAGTTTaGTATACCAGCGAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: LAKHELAVLLVHVMVNMVERIQV*YTSEQA
Trigger: GGCCTGCTCGCTGGTATACCAAACTTGGATTCTTTC...AACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR-3UTR TCA 90 bp CTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGCAGCAGTGTACGGCCCTaGAGTACAGTCTTTAGTTGG +
Preference number: 2 (lower is better)
Translates to: LDLSLFLIIQHLPVIIQGSSVRP*STVFSW
Trigger: CCAACTAAAGACTGTACTTCAGGGCCGTACACTGCT...GCCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR TCA 90 bp GGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGTTCCTGTACCAGGAATaGTTTGAGCAGTGTACGGCC +
Preference number: 2 (lower is better)
Translates to: GLPNFQLDLSLFLIIQHLFLYQE*FEQCTA
Trigger: GGCCGTACACTGCTCAAATCATTCCTGGTACAGGAA...CAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR GCA 90 bp TCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTAAGGTAAGCTGGGTCTaGTGCATTCTTCACTGCTTC +
Preference number: 2 (lower is better)
Translates to: SLDKPCSFCSADSMAFLIKVSWV*CILHCF
Trigger: GAAGCAGTGAAGAATGCAGCAGACCCAGCTTACCTT...AATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR GCA 90 bp ATAAGGCTTCTAGTCTCTTTTGTTGGGCCTCCACATATTTTGCTGCTTCCTTTTAAGGTAAGCTGGGTCTaGTGCATTCTTCACTGCTTC +
Preference number: 2 (lower is better)
Translates to: IRLLVSFVGPPHILLLPFKVSWV*CILHCF
Trigger: GAAGCAGTGAAGAATGCAGCAGACCCAGCTTACCTT...AAAAGGAAGCAGCAAAATATGTGGAGGCCCAACAAAAGAGACTAGAAGCCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR-3UTR CCA 90 bp CTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGCACCCTCAAGGTAAGCTaGGTCTGCTGCATTCTTCAC +
Preference number: 2 (lower is better)
Translates to: LDLSLFLIIQHLPVIIQGTLKVS*VCCILH
Trigger: GTGAAGAATGCAGCAGACCCAGCTTACCTTGAGGGT...GCCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
3UTR CAA 90 bp GGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTaGTTTTCTGCTTCATTGCAAAGTATGTCAATATTCTGTAGTCCC +
Preference number: 2 (lower is better)
Translates to: GVDHLGSFACSICIS*FSASLQSMSIFCSP
Trigger: GGGACTACAGAATATTGACATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470094.1
3UTR-3UTR GCA 90 bp GACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATGCTTCATAAAGCTCTaGACCATCTTGCAAAGCACG +
Preference number: 2 (lower is better)
Translates to: DHLGSFACSICISLFSASCFIKL*TILQST
Trigger: CGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAGCA...TGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR GCA 90 bp ATTACATCAACACAACCAACATTTCCTCCATCACTGAAAAGCGATGATAAGGGCTGCTGCATTCTTCACTaGTTCATAAAGCTCTGCACC +
Preference number: 2 (lower is better)
Translates to: ITSTQPTFPPSLKSDDKGCCILH*FIKLCT
Trigger: GGTGCAGAGCTTTATGAAGCAGTGAAGAATGCAGCA...GCCCTTATCATCGCTTTTCAGTGATGGAGGAAATGTTGGTTGTGTTGATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR-3UTR GCA 90 bp ATTACATCAACACAACCAACATTTCCTCCATCACTGAAAAGCGATGATAAGGGCGTAAGCTGGGTCTGCTaGATTCTTCACTGCTTCATA +
Preference number: 2 (lower is better)
Translates to: ITSTQPTFPPSLKSDDKGVSWVC*ILHCFI
Trigger: TATGAAGCAGTGAAGAATGCAGCAGACCCAGCTTAC...GCCCTTATCATCGCTTTTCAGTGATGGAGGAAATGTTGGTTGTGTTGATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR-3UTR GCA 90 bp TCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTGTAAGCTGGGTCTGCTaGATTCTTCACTGCTTCATA +
Preference number: 2 (lower is better)
Translates to: SLDKPCSFCSADSMAFLIVSWVC*ILHCFI
Trigger: TATGAAGCAGTGAAGAATGCAGCAGACCCAGCTTAC...AATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR GCA 90 bp AAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTTGTTAAGGTAAGCTGGGTCTaGTGCATTCTTCACTGCTTC +
Preference number: 2 (lower is better)
Translates to: KARTCCLVSARDGKYGFVKVSWV*CILHCF
Trigger: GAAGCAGTGAAGAATGCAGCAGACCCAGCTTACCTT...AACAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR CCA 90 bp GGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGTTGGGGTGGACCACTTaGGATCATTTGCATGCAGTA +
Preference number: 2 (lower is better)
Translates to: GLPNFQLDLSLFLIIQHLLGWTT*DHLHAV
Trigger: TACTGCATGCAAATGATCCCAAGTGGTCCACCCCAA...CAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR CAA 90 bp GAAAACACAGAAAAATCTCCAGCAAATAAAGTAAGAAGGCCTGATTaGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATA +
Preference number: 2 (lower is better)
Translates to: ENTEKSPANKVRRPD*DSGRHWRLLAAINI
Trigger: TATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACTTTATTTGCTGGAGATTTTTCTGTGTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614259.2
ENST00000665585.1
ENST00000666593.1
3UTR CAA 90 bp GAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTTGTaGTGTTTTCAGAAGTTGATTCCAACCCTCATGGATGACTTTGGG +
Preference number: 2 (lower is better)
Translates to: ELAVLLVHVMVNMVL*CFQKLIPTLMDDFG
Trigger: CCCAAAGTCATCCATGAGGGTTGGAATCAACTTCTGAAAACACAACAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665585.1
3UTR CAA 90 bp CTTCATAAAGCTCTGCACCATCTTGCAAAGCACGAACTTGCTGTCTaGTTAGTGCACGTGATGGTAAATATGGTTTTGTTGTGTTTTCAG +
Preference number: 2 (lower is better)
Translates to: LHKALHHLAKHELAV*LVHVMVNMVLLCFQ
Trigger: CTGAAAACACAACAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665585.1
3UTR-3UTR TCA 90 bp GTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTATCTGTATTTTAGTTaGAGAAGCACCCTTTCTGGG +
Preference number: 2 (lower is better)
Translates to: VDHLGSFACSICISLFSAYLYFS*RSTLSG
Trigger: CCCAGAAAGGGTGCTTCTTCAACTAAAATACAGATA...AGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR-3UTR GCA 90 bp GATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACGAGAACAAGTGTTTTTaGAGCTGTGTCATCCCTTTC +
Preference number: 2 (lower is better)
Translates to: DKPCSFCSADSMAFLISNENKCF*SCVIPF
Trigger: GAAAGGGATGACACAGCTGCAAAAACACTTGTTCTC...GTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR CAA 90 bp CTTCATAAAGCTCTGCACCATCTTGCAAAGCACGAACTTGCTGTCTaGTTAGTGCACGTGATGGTAAATATGGTTTTGTTGTGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: LHKALHHLAKHELAV*LVHVMVNMVLLCFL
Trigger: AAGAAAACACAACAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR CAA 90 bp GGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTaGTTTTCTGCTTCATTGCAAAGTATGTCAATATTCTCAACAGTA +
Preference number: 2 (lower is better)
Translates to: GVDHLGSFACSICIS*FSASLQSMSIFSTV
Trigger: TACTGTTGAGAATATTGACATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR CAA 90 bp CACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTaGTTGTGTTTTCAGAAGTTGATTCCAACCCTCATGGATGACTTT +
Preference number: 2 (lower is better)
Translates to: HELAVLLVHVMVNMV*LCFQKLIPTLMDDF
Trigger: AAAGTCATCCATGAGGGTTGGAATCAACTTCTGAAAACACAACAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665585.1
3UTR-3UTR TCA 90 bp TTGATAATATATCTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCGATCTAAAAATTTGCTaGAGTGAAGGGGCTCCCGTG +
Preference number: 2 (lower is better)
Translates to: LIIYLTIRRRHQKLVSCTDLKIC*SEGAPV
Trigger: CACGGGAGCCCCTTCACTTCAGCAAATTTTTAGATC...GGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAGATATATTATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR GCA 90 bp GTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCTTTGCATGCAGTATATaGATAAGCTTGTTTTCTGCT +
Preference number: 2 (lower is better)
Translates to: VTSLDKPCSFCSADSMAFFACSI*ISLFSA
Trigger: AGCAGAAAACAAGCTTATGCATATACTGCATGCAAA...GAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR GCA 90 bp ACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGTGCAAAGCACGAACTTaGTGTCTTGTTAGTGCACGT +
Preference number: 2 (lower is better)
Translates to: TGSELVSYHSTFACDYSRCKART*CLVSAR
Trigger: ACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCA...CCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR GCA 90 bp ACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGTGCTTCATAAAGCTCTaGACCATCTTGCAAAGCACG +
Preference number: 2 (lower is better)
Translates to: TGSELVSYHSTFACDYSRCFIKL*TILQST
Trigger: CGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAGCA...CCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR GCA 90 bp TCTGTCATTCTGTCATCACGATGGTCATGTTTCCTGGAAATTTCAGTATCCTCACTTCCAATACTCTGTTaGTCCCAAGTTCCTTGTTTT +
Preference number: 2 (lower is better)
Translates to: SVILSSRWSCFLEISVSSLPILC*SQVPCF
Trigger: AAAACAAGGAACTTGGGAGCAACAGAGTATTGGAAG...TGAGGATACTGAAATTTCCAGGAAACATGACCATCGTGATGACAGAATGACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666593.1
3UTR-3UTR TCA 90 bp GATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTTCAACATTTGCCTGTaGTTATTCAAGGCTCTTAAC +
Preference number: 2 (lower is better)
Translates to: DKPCSFCSADSMAFLISNFNICL*LFKALN
Trigger: GTTAAGAGCCTTGAATAATCACAGGCAAATGTTGAA...GTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR TCA 90 bp TTGATAATATATCTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCACTTCCACACGGTTGTaGCATCCCTTGATAAACCTT +
Preference number: 2 (lower is better)
Translates to: LIIYLTIRRRHQKLVSCTTSTRL*HPLINL
Trigger: AAGGTTTATCAAGGGATGTCACAACCGTGTGGAAGT...GGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAGATATATTATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR TCA 90 bp CTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGCTTCAACATTTGCCTGTaGTTATTCAAGGCTCTTAAC +
Preference number: 2 (lower is better)
Translates to: LDLSLFLIIQHLPVIIQGFNICL*LFKALN
Trigger: GTTAAGAGCCTTGAATAATCACAGGCAAATGTTGAA...GCCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR GCA 90 bp TCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTTTGCATGCAGTATATaGATAAGCTTGTTTTCTGCT +
Preference number: 2 (lower is better)
Translates to: SLDKPCSFCSADSMAFLIFACSI*ISLFSA
Trigger: AGCAGAAAACAAGCTTATGCATATACTGCATGCAAA...AATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR CAA 90 bp CTTAACAGCATACCACCCATCTGTAAGTTCAATAATGGCCACTTTTaGGGTATCTGCACTACTAGTTTTATTGCTAGAAGTTTCAGATAT +
Preference number: 2 (lower is better)
Translates to: LNSIPPICKFNNGHF*GICTTSFIARSFRY
Trigger: ATATCTGAAACTTCTAGCAATAAAACTAGTAGTGCAGATACCCAAAAAGTGGCCATTATTGAACTTACAGATGGGTGGTATGCTGTTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR-3UTR GCA 90 bp CCAGACAAAAGAGCTTGGGTATTTATCAATGCAAGTTCTTCGTCAGCTATTGAATTAAGGATGAAGAATTaGTCAAAAGGAAACACCACT +
Preference number: 2 (lower is better)
Translates to: PDKRAWVFINASSSSAIELRMKN*SKGNTT
Trigger: AGTGGTGTTTCCTTTTGAGCAATTCTTCATCCTTAA...TTCAATAGCTGACGAAGAACTTGCATTGATAAATACCCAAGCTCTTTTGTCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACGGGCAAAACGATTTTaGCCCGATACACAAACGCTG +
Preference number: 3 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPRAKRF*PDTQTL
Trigger: CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
3UTR TCA 72 bp TCCTGTACCAGGAATGATTTGAGCAGTGTACGGCCCTaGAGTACAGTCTTTAGTTGGGGTGGACCACTTGGG +
Preference number: 3 (lower is better)
Translates to: SCTRNDLSSVRP*STVFSWGGPLG
Trigger: CCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGGCCGTACACTGCTCAAATCATTCCTGGTACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR CAA 90 bp GTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGTTGGGGTGGACCACTaGGGATCATTTGCATGCAGT +
Preference number: 3 (lower is better)
Translates to: VIWAETGVETDFLLAIQSVGVDH*GSFACS
Trigger: ACTGCATGCAAATGATCCCAAGTGGTCCACCCCAAC...ACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470094.1
ENST00000614259.2
3UTR TCA 72 bp CAAGACTTCAGTGGAGGAAGTAACCAAATCTCATCTTaGACGGTAATCCTCACGTGTCGAGGGACGGACCTG +
Preference number: 3 (lower is better)
Translates to: QDFSGGSNQISS*TVILTCRGTDL
Trigger: CAGGTCCGTCCCTCGACACGTGAGGATTACCGTTCAAGATGAGATTTGGTTACTTCCTCCACTGAAGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665585.1
3UTR CCA 72 bp CTTTATGGGTGTTTCGTATTTGGTGCCACAACTCCTTaGTGGCTGAAATGCCTTCTGTGCAGCCGGAGAAAC +
Preference number: 3 (lower is better)
Translates to: LYGCFVFGATTP*WLKCLLCSRRN
Trigger: GTTTCTCCGGCTGCACAGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACCAAATACGAAACACCCATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR TCA 72 bp GGTGTTTCGTATTTGGTGCCACAACTCCTTGGTGGCTaGAATGCCTTCTGTGCAGCCGGAGAAACAAATGTA +
Preference number: 3 (lower is better)
Translates to: GVSYLVPQLLGG*NAFCAAGETNV
Trigger: TACATTTGTTTCTCCGGCTGCACAGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACCAAATACGAAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR CCA 72 bp TATGGGTGTTTCGTATTTGGTGCCACAACTCCTTGGTaGCTGAAATGCCTTCTGTGCAGCCGGAGAAACAAA +
Preference number: 3 (lower is better)
Translates to: YGCFVFGATTPW*LKCLLCSRRNK
Trigger: TTTGTTTCTCCGGCTGCACAGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACCAAATACGAAACACCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR-3UTR CAA 90 bp CTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGGTTGGGGTGGACCACTaGGGATCATTTGCATGCAGT +
Preference number: 3 (lower is better)
Translates to: LLFSRFHGLPNFQLDLSLVGVDH*GSFACS
Trigger: ACTGCATGCAAATGATCCCAAGTGGTCCACCCCAAC...CAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR CAA 90 bp CCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTCACGAACTTGCTGTCTaGTTAGTGCACGTGATGGTA +
Preference number: 3 (lower is better)
Translates to: PEVQSLVGVDHLGSFACSHELAV*LVHVMV
Trigger: TACCATCACGTGCACTAACAAGACAGCAAGTTCGTG...ACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR TCA 72 bp TGTAGTACAACGTCGTTTCAGTCTGAGATAATCTTCTaGACTGGTGGGAGCAGTCCTAGTGGATTCACTGAC +
Preference number: 3 (lower is better)
Translates to: CSTTSFQSEIIF*TGGSSPSGFTD
Trigger: GTCAGTGAATCCACTAGGACTGCTCCCACCAGTTCAGAAGATTATCTCAGACTGAAACGACGTTGTACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR GCA 72 bp TTCGTATTTGGTGCCACAACTCCTTGGTGGCTGAAATaGCTTCTGTGCAGCCGGAGAAACAAATGTACAAAT +
Preference number: 3 (lower is better)
Translates to: FVFGATTPWWLK*LLCSRRNKCTN
Trigger: ATTTGTACATTTGTTTCTCCGGCTGCACAGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACCAAATACGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR CCA 72 bp CCATTCTTTAAGACAGCTAAGAGGGGAGGATCTAACTaGGCCTTAACAGCATACCACCCATCTGTAAGTTCA +
Preference number: 3 (lower is better)
Translates to: PFFKTAKRGGSN*ALTAYHPSVSS
Trigger: TGAACTTACAGATGGGTGGTATGCTGTTAAGGCCCAGTTAGATCCTCCCCTCTTAGCTGTCTTAAAGAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR CCA 72 bp GACGAAAGGGGCAAGTCTGTCATTCTGTCATCACGATaGTCATGTTTCCTGGAAATTTCAGTATCCTCACAG +
Preference number: 3 (lower is better)
Translates to: DERGKSVILSSR*SCFLEISVSSQ
Trigger: CTGTGAGGATACTGAAATTTCCAGGAAACATGACCATCGTGATGACAGAATGACAGACTTGCCCCTTTCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666593.1
3UTR-3UTR CAA 90 bp ACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCACGAACTTGCTGTCTaGTTAGTGCACGTGATGGTA +
Preference number: 3 (lower is better)
Translates to: TLFLLFSRFHGLPNFQLDHELAV*LVHVMV
Trigger: TACCATCACGTGCACTAACAAGACAGCAAGTTCGTG...ATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
3UTR TCA 72 bp GACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTaGGCAGTGTACGGCCCTGAAGTACAGTCTTTAGTT +
Preference number: 3 (lower is better)
Translates to: DIRSLFPVPGMI*AVYGPEVQSLV
Trigger: AACTAAAGACTGTACTTCAGGGCCGTACACTGCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
3UTR TCA 72 bp AACAAGATGGCTGAAAGTCTGGATCTAAAAATTTGCTaGAGTGAAGGGGCTCCCGTGGCTGGTAAATCTGAA +
Preference number: 3 (lower is better)
Translates to: NKMAESLDLKIC*SEGAPVAGKSE
Trigger: TTCAGATTTACCAGCCACGGGAGCCCCTTCACTTCAGCAAATTTTTAGATCCAGACTTTCAGCCATCTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR CAA 90 bp ACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATGAAGACATCAGAAGCTaGTTTCCTGTACCAGGAATG +
Preference number: 3 (lower is better)
Translates to: TLFLLFSRFHGLPNFQLDEDIRS*FPVPGM
Trigger: CATTCCTGGTACAGGAAACAAGCTTCTGATGTCTTC...ATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR CAA 90 bp GATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACCACGAACTTGCTGTCTaGTTAGTGCACGTGATGGTA +
Preference number: 3 (lower is better)
Translates to: DKPCSFCSADSMAFLISNHELAV*LVHVMV
Trigger: TACCATCACGTGCACTAACAAGACAGCAAGTTCGTG...GTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR CAA 90 bp CTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGCAAGCTCTGCACCATCTaGCAAAGCACGAACTTGCTG +
Preference number: 3 (lower is better)
Translates to: LDLSLFLIIQHLPVIIQGKLCTI*QSTNLL
Trigger: CAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGCTT...GCCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
3UTR TCA 72 bp GGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATaGGGCTTAATAATGTCCTCATTAAGGTCTATCCAA +
Preference number: 3 (lower is better)
Translates to: GRHWRLLAAINI*GLIMSSLRSIQ
Trigger: TTGGATAGACCTTAATGAGGACATTATTAAGCCTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614259.2
ENST00000665585.1
ENST00000666593.1
3UTR GCA 72 bp GGGGTGGACCACTTGGGATCATTTGCATGCAGTATATaGATAAGCTTGTTTTCTGCTTCATTGCAAAGTATG +
Preference number: 3 (lower is better)
Translates to: GVDHLGSFACSI*ISLFSASLQSM
Trigger: CATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
3UTR GCA 72 bp ACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTaGATGCAGTATATGCATAAGCTTGTTTTCTGCTTC +
Preference number: 3 (lower is better)
Translates to: TVFSWGGPLGII*MQYMHKLVFCF
Trigger: GAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
3UTR CCA 72 bp TCCTGCTTATTTTTCTCACATTCTTCCGTACTGGCCTaGGAACTCTCCTGTTCTTTGATCAGAGATGTAGTA +
Preference number: 3 (lower is better)
Translates to: SCLFFSHSSVLA*ELSCSLIRDVV
Trigger: TACTACATCTCTGATCAAAGAACAGGAGAGTTCCCAGGCCAGTACGGAAGAATGTGAGAAAAATAAGCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR CCA 72 bp AGTCTGTCATTCTGTCATCACGATGGTCATGTTTCCTaGAAATTTCAGTATCCTCACAGGCAATCCTTCCAA +
Preference number: 3 (lower is better)
Translates to: SLSFCHHDGHVS*KFQYPHRQSFQ
Trigger: TTGGAAGGATTGCCTGTGAGGATACTGAAATTTCCAGGAAACATGACCATCGTGATGACAGAATGACAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666593.1
3UTR-3UTR CAA 90 bp CAAGTCTGTCATTCTGTCATCACGATGGTCATGTTTCCTGGAAATTTCAGTATCCCTTCCAATACTCTGTaGCTCCCAAGTTCCTTGTTT +
Preference number: 3 (lower is better)
Translates to: QVCHSVITMVMFPGNFSIPSNTL*LPSSLF
Trigger: AAACAAGGAACTTGGGAGCAACAGAGTATTGGAAGG...GATACTGAAATTTCCAGGAAACATGACCATCGTGATGACAGAATGACAGACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666593.1
3UTR-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCGGGCAAAACGATTTTaGCCCGATACACAAACGCTG +
Preference number: 3 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYRAKRF*PDTQTL
Trigger: CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
3UTR-3UTR CAA 90 bp GTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTTATCATTCAACATTaGCCTGTGATTATTCAAGGC +
Preference number: 3 (lower is better)
Translates to: VTSLDKPCSFCSADSMAFLIIQH*PVIIQG
Trigger: GCCTTGAATAATCACAGGCAAATGTTGAATGATAAG...GAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
3UTR TCA 72 bp TTGAATAGCTTACAATACGCAACTTCCACACGGTTGTaGCATCCCTTGATAAACCTTGTTCCTTTTGTTCAG +
Preference number: 3 (lower is better)
Translates to: LNSLQYATSTRL*HPLINLVPFVQ
Trigger: CTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCACAACCGTGTGGAAGTTGCGTATTGTAAGCTATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR-3UTR CAA 90 bp ATAAGGCTTCTAGTCTCTTTTGTTGGGCCTCCACATATTTTGCTGCTTCCTTTTCTTATCATTCAACATTaGCCTGTGATTATTCAAGGC +
Preference number: 3 (lower is better)
Translates to: IRLLVSFVGPPHILLLPFLIIQH*PVIIQG
Trigger: GCCTTGAATAATCACAGGCAAATGTTGAATGATAAG...AAAAGGAAGCAGCAAAATATGTGGAGGCCCAACAAAAGAGACTAGAAGCCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR-3UTR CAA 90 bp CTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGCTTGTGTTTTCAGAAGTaGATTCCAACCCTCATGGAT +
Preference number: 3 (lower is better)
Translates to: LDLSLFLIIQHLPVIIQGLCFQK*IPTLMD
Trigger: ATCCATGAGGGTTGGAATCAACTTCTGAAAACACAA...GCCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665585.1
3UTR-3UTR CAA 90 bp CTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGCCAACTGGATCTGAGCTaGTTTCTTATCATTCAACAT +
Preference number: 3 (lower is better)
Translates to: LDLSLFLIIQHLPVIIQGQLDLS*FLIIQH
Trigger: ATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTG...GCCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
3UTR CCA 72 bp TACCACCCATCTGTAAGTTCAATAATGGCCACTTTTTaGGTATCTGCACTACTAGTTTTATTGCTAGAAGTT +
Preference number: 3 (lower is better)
Translates to: YHPSVSSIMATF*VSALLVLLLEV
Trigger: AACTTCTAGCAATAAAACTAGTAGTGCAGATACCCAAAAAGTGGCCATTATTGAACTTACAGATGGGTGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR TCA 72 bp GGATTCACTGACAGATATAAATTGTTTTTCTCCTGTTaGACCAGACAAAAGAGCTTGGGTATTTATCAATGC +
Preference number: 3 (lower is better)
Translates to: GFTDRYKLFFSC*TRQKSLGIYQC
Trigger: GCATTGATAAATACCCAAGCTCTTTTGTCTGGTTCAACAGGAGAAAAACAATTTATATCTGTCAGTGAATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGCAGAGGCGCAGCAGTaGCACAGCGGCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPAEAQQ*HSGSAS
Trigger: AGAGGCGGAGCCGCTGTGGCACTGCTGCGCCTCTGC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380152.8
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACCGGGAAGTGGAGGCTaGAGTGAGCCAGGATCATGC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPPGSGG*SEPGSC
Trigger: GCATGATCCTGGCTCACTGCAGCCTCCACTTCCCGG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTGGCCGGAGTAAGCTaGCAAAAACCGCGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPLAGVS*QKPRRS
Trigger: TGACCGGCGCGGTTTTTGTCAGCTTACTCCGGCCAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380152.8
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAAGTGGAGGCTGCAGTaGGCCAGGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPKWRLQ*ARIMPL
Trigger: CAGTGGCATGATCCTGGCTCACTGCAGCCTCCACTT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACCAGGATCATGCCACTaGACTCCAGCATGGGCGACA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPPGSCH*TPAWAT
Trigger: TGTCGCCCATGCTGGAGTGCAGTGGCATGATCCTGG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACAACTCCTTGGTGGCTaGAATGCCTTCTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPQLLGG*NAFCAA
Trigger: GGCTGCACAGAAGGCATTTCAGCCACCAAGGAGTTG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACCTTGGTGGCTGAAATaGCTTCTGTGCAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPPWWLK*LLCSRR
Trigger: TCTCCGGCTGCACAGAAGGCATTTCAGCCACCAAGG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACATCATTGGAGGGTATaGGCCATCCACCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPHHWRV*AIHHQP
Trigger: TGGCTGATGGTGGATGGCTCATACCCTCCAATGATG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAAAAATTTGCTGAAGTaGAGGGGCTCCCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPKNLLK*RGSRGW
Trigger: CCAGCCACGGGAGCCCCTTCACTTCAGCAAATTTTT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACAGAATTCTGTGTGGTaGTGGCTGGCCAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPQNSVW*WLASFH
Trigger: ATGGAAGCTGGCCAGCCACCACCACACAGAATTCTG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACTTTGGATCCACACCTaGAGTGTCACACAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPLWIHT*SVTQSP
Trigger: AGGGCTCTGTGTGACACTCCAGGTGTGGATCCAAAG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGGTGCCACAACTCCTTaGTGGCTGAAATGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPGATTP*WLKCLL
Trigger: CAGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAGCAGTGTACGGCCCTaGAGTACAGTCTTTAGTTGG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSSVRP*STVFSW
Trigger: CCAACTAAAGACTGTACTTCAGGGCCGTACACTGCT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTCCTGTACCAGGAATaGTTTGAGCAGTGTACGGCC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPFLYQE*FEQCTA
Trigger: GGCCGTACACTGCTCAAATCATTCCTGGTACAGGAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTGTACTGGGTGACATaGTGCAGCCAAGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPLYWVT*CSQDLF
Trigger: GAAGAGGTCTTGGCTGCAGCATGTCACCCAGTACAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGATTCTGGTCGCCACTaGAGGTTGCTTGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPDSGRH*RLLAAI
Trigger: AATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATCTTCCGTACTGGCCTaGGAACTCTCCTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSSVLA*ELSCSL
Trigger: CAAAGAACAGGAGAGTTCCCAGGCCAGTACGGAAGA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACACATTCTTCCGTACTaGCCTGGGAACTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPHILPY*PGNSPV
Trigger: AACAGGAGAGTTCCCAGGCCAGTACGGAAGAATGTG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACCTGAAAGGGTTAGTTaGGACCATTCACAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPPERVS*DHSQAK
Trigger: TTTGGCCTGTGAATGGTCTCAACTAACCCTTTCAGG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATGGAAGGTCACTAGTTaGTTTCCAGTACCAACTGGG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPWKVTS*FPVPTG
Trigger: CCCAGTTGGTACTGGAAATCAACTAGTGACCTTCCA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATCTGAGATAATCTTCTaGACTGGTGGGAGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSEIIF*TGGSSP
Trigger: AGGACTGCTCCCACCAGTTCAGAAGATTATCTCAGA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATCACACTGTCCTTCCTaGAGGCATGACAGAGAATCA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSHCPS*RHDRES
Trigger: TGATTCTCTGTCATGCCTGCAGGAAGGACAGTGTGA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATACTGGGTGACATGCTaGAGCCAAGACCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPYWVTC*SQDLFF
Trigger: AAAGAAGAGGTCTTGGCTGCAGCATGTCACCCAGTA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAACTGGCTATCCTAAATaGAGGTGGCCCTACCTCAAA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPTGYPK*RWPYLK
Trigger: TTTGAGGTAGGGCCACCTGCATTTAGGATAGCCAGT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAAGGTAAGCTGGGTCTaGTGCATTCTTCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPKVSWV*CILHCF
Trigger: GAAGCAGTGAAGAATGCAGCAGACCCAGCTTACCTT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGTGTTTCGTATTTGGTaGCACAACTCCTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPVFRIW*HNSLVA
Trigger: AGCCACCAAGGAGTTGTGGCACCAAATACGAAACAC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAATTCTGTGTGGTGGTaGCTGGCCAGCTTCCATTAT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPNSVWW*LASFHY
Trigger: ATAATGGAAGCTGGCCAGCCACCACCACACAGAATT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTGGGGTGGACCACTTaGGATCATTTGCATGCAGTA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPLGWTT*DHLHAV
Trigger: TACTGCATGCAAATGATCCCAAGTGGTCCACCCCAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAGTACAGTCTTTAGTTaGGGTGGACCACTTGGGATC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSTVFS*GGPLGI
Trigger: GATCCCAAGTGGTCCACCCCAACTAAAGACTGTACT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGACTTTGAAGTCATCTaGGCTGAGACAGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPDFEVI*AETGVE
Trigger: TTCCACACCTGTCTCAGCCCAGATGACTTCAAAGTC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATGGGTGTTTCGTATTTaGTGCCACAACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPWVFRI*CHNSLV
Trigger: CACCAAGGAGTTGTGGCACCAAATACGAAACACCCA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAATGCAAAAATTAGCTaGGCATGGTGGTGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPNAKIS*AWWCVP
Trigger: AGGGACGCACCACCATGCCCAGCTAATTTTTGCATT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGGAGTCCTCCTTCTGTaGGCAAACAGTATGTATTTC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPGVLLL*ANSMYF
Trigger: GAAATACATACTGTTTGCTCACAGAAGGAGGACTCC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAGGGTCTTTGCCCATTaGTGGCTAAAACTGGTGATT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPRVFAH*WLKLVI
Trigger: AATCACCAGTTTTAGCCATCAATGGGCAAAGACCCT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGTATACAGCTGTTTATaGGAACACGCAGAGGGAACT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPVYSCL*EHAEGT
Trigger: AGTTCCCTCTGCGTGTTCTCATAAACAGCTGTATAC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACATTTCCTCCATCACTaGAAAGCGATGATAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPHFLHH*KAMIRA
Trigger: TGCCCTTATCATCGCTTTTCAGTGATGGAGGAAATG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAACTTCCACACGGTTGTaGCATCCCTTGATAAACCTT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPTSTRL*HPLINL
Trigger: AAGGTTTATCAAGGGATGTCACAACCGTGTGGAAGT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACAGAGTGGATGTTTTTaGAAGATACAGACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPQSGCF*KIQTAW
Trigger: CCAGGCAGTCTGTATCTTGCAAAAACATCCACTCTG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGGCACATTCCATAGCTaGCAGTTTCCATATGATCCA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPGTFHS*QFPYDP
Trigger: TGGATCATATGGAAACTGGCAGCTATGGAATGTGCC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATGCAAAGCACGAACTTaGTGTCTTGTTAGTGCACGT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPCKART*CLVSAR
Trigger: ACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATGCTTCATAAAGCTCTaGACCATCTTGCAAAGCACG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPCFIKL*TILQST
Trigger: CGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAGCA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATGCTGCATTCTTCACTaGTTCATAAAGCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPCCILH*FIKLCT
Trigger: GGTGCAGAGCTTTATGAAGCAGTGAAGAATGCAGCA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGTAAGCTGGGTCTGCTaGATTCTTCACTGCTTCATA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPVSWVC*ILHCFI
Trigger: TATGAAGCAGTGAAGAATGCAGCAGACCCAGCTTAC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGTCGCCACTGGAGGTTaGTTGCAGCAATTAACATAT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPVATGG*LQQLTY
Trigger: ATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGAC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTCCGGGAAGTGGAGGCTaGAGTGAGCCAGGATCATGC +
Preference number: 4 (lower is better)
Translates to: VIWAETGVETDFLLAIQSPGSGG*SEPGSC
Trigger: GCATGATCCTGGCTCACTGCAGCCTCCACTTCCCGG...ACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAGAATGCAGTCTGTATaGGATTCAAGATGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPRMQSV*DSRCCS
Trigger: AGAGCAGCATCTTGAATCTCATACAGACTGCATTCT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTTGATACCCTGAAATaGAGAAGCCACTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPFDTLK*RSHWRS
Trigger: ACTTCTCCAGTGGCTTCTTCATTTCAGGGTATCAAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAGAGAATGTGTGGCATaGCTTGGCAGTTTAGAATCT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPRECVA*LGSLES
Trigger: AGATTCTAAACTGCCAAGTCATGCCACACATTCTCT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTGTTGAATGTCTCTTaGAAGTGGCCCTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPLLNVS*KWPSFG
Trigger: TCCAAAAGAGGGCCACTTTCAAGAGACATTCAACAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAACGTCGTTTCAGTCTaGGATAATCTTCTGAACTGG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPNVVSV*DNLLNW
Trigger: CCAGTTCAGAAGATTATCTCAGACTGAAACGACGTT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GTCAGTCTGCCATTCTTTAAGACAGCTAAGAGGGGAGGATCTAACTGGGCCTTAAAGTGGAGGCTGCAGTaGGCCAGGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: VSLPFFKTAKRGGSNWALKWRLQ*ARIMPL
Trigger: CAGTGGCATGATCCTGGCTCACTGCAGCCTCCACTT...TAAGGCCCAGTTAGATCCTCCCCTCTTAGCTGTCTTAAAGAATGGCAGACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp GTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCGGCACGAGAATCGCTTaGGCCCAGGAGGCAGACACT +
Preference number: 4 (lower is better)
Translates to: VQSLVGVDHLGSFACSICGTRIA*AQEADT
Trigger: AGTGTCTGCCTCCTGGGCTCAAGCGATTCTCGTGCC...GCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470094.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGTTCCAGATATTGCCTaGTTTACTGCAAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPVPDIA*FTARMQ
Trigger: CTGCATTCTTGCAGTAAAGCAGGCAATATCTGGAAC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATACCTTCAAATTGCTTaGTGCTGTCTACCTGACCAA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPYLQIA*CCLPDQ
Trigger: TTGGTCAGGTAGACAGCAGCAAGCAATTTGAAGGTA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGAGAACAAGTGTTTTTaGAGCTGTGTCATCCCTTTC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPENKCF*SCVIPF
Trigger: GAAAGGGATGACACAGCTGCAAAAACACTTGTTCTC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGACCAACTGTCAGTCTaGCATTCTTTAAGACAGCTA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPDQLSV*HSLRQL
Trigger: TAGCTGTCTTAAAGAATGGCAGACTGACAGTTGGTC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAGAGCCCACCAGTTCTaGTCCATGAAGAATAATCTT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPRAHQF*SMKNNL
Trigger: AAGATTATTCTTCATGGAGCAGAACTGGTGGGCTCT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAACGGTACAACTTCCTTaGAGATTTTGTCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPTVQLP*RFCHFH
Trigger: GTGGAAGTGACAAAATCTCCAAGGAAGTTGTACCGT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGGTATTTTCTCCATCTaGGCTCCATTTAGACCTGAA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPGIFSI*APFRPE
Trigger: TTCAGGTCTAAATGGAGCCCAGATGGAGAAAATACC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATACCTGACCAATCGATaGGGCATTCATTATGACATG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPYLTNR*GIHYDM
Trigger: CATGTCATAATGAATGCCCCATCGATTGGTCAGGTA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGAAGCATCTGATACCTaGACAGATTTTCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPEASDT*TDFPLA
Trigger: AGCAAGTGGAAAATCTGTCCAGGTATCAGATGCTTC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAATGTGTGGCATGACTTaGCAGTTTAGAATCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPMCGMT*QFRICQ
Trigger: CTGACAGATTCTAAACTGCCAAGTCATGCCACACAT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATCTAGAAATAAGCTTTaGATCCACACCTGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSRNKL*IHTWSV
Trigger: GACACTCCAGGTGTGGATCCAAAGCTTATTTCTAGA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAAAGTGGCCCTCTTTTaGACTAGCAGAAAACACAGA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPKVALF*TSRKHR
Trigger: TCTGTGTTTTCTGCTAGTCCAAAAGAGGGCCACTTT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATCAGCCCTTGCTCTTTaGATATTATTGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSALAL*ILLELK
Trigger: CTTCAACTCCAATAATATTCAAAGAGCAAGGGCTGA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAACAAACTTTGGTGTATaGAACAAACTCCCACATACC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPTNFGV*NKLPHT
Trigger: GGTATGTGGGAGTTTGTTTCATACACCAAAGTTTGT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACTTGCAGCTTCTCTTTaGTTTGTGTTTTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPLAASL*FVFSLS
Trigger: AGACAGTGAAAACACAAATCAAAGAGAAGCTGCAAG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACTCTCAAAGGGCTTCTaGTTTGCTACATTTGAATCT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPLSKGF*FATFES
Trigger: AGATTCAAATGTAGCAAATCAGAAGCCCTTTGAGAG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAACTGTATTCCACTTTTaGATGTTGTACTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPTVFHF*MLYWVT
Trigger: TGTCACCCAGTACAACATTCAAAAGTGGAATACAGT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAGACATATGTTGTGCTaGTCAGTAAATAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPRHMLC*SVNSKS
Trigger: GGACTTGCTATTTACTGATCAGCACAACATATGTCT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTTATTTTTGCAGGGTaGAGAGCTAGTCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPFIFAG*RASHKF
Trigger: GAACTTGTGACTAGCTCTTCACCCTGCAAAAATAAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAATGAAGAATATCCTCTaGATCATCCAATGCCTCGTA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPMKNIL*IIQCLV
Trigger: TACGAGGCATTGGATGATTCAGAGGATATTCTTCAT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAGCAAAAACCTTATGTaGATGCGTGCTACATTCATC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSKNLM*MRATFI
Trigger: GATGAATGTAGCACGCATTCACATAAGGTTTTTGCT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATATTTTCTTCTCTTGTaGGCTGGTCTGAATGTTCGT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPYFLLL*AGLNVR
Trigger: ACGAACATTCAGACCAGCTCACAAGAGAAGAAAATA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTGTTTTTCTCCTGTTaGACCAGACAAAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPLFFSC*TRQKSL
Trigger: CAAGCTCTTTTGTCTGGTTCAACAGGAGAAAAACAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAACGATATTCCTCCAATaGTTGGTAAATAAGTCCGCT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPTIFLQ*LVNKSA
Trigger: AGCGGACTTATTTACCAAGCATTGGAGGAATATCGT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380152.8
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAGTATTACCATGACATaGTTCTTGAGCTTTCGCAAC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSITMT*FLSFRN
Trigger: GTTGCGAAAGCTCAAGAAGCATGTCATGGTAATACT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATCTGAGTTTACACAGTaGTCTGGGTTTCTCTTATCA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSEFTQ*SGFLLS
Trigger: TGATAAGAGAAACCCAGAGCACTGTGTAAACTCAGA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TCTCCAGCAAATAAAGTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGAGTGAGCCAGGATCATaGCACTGCACTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: SPANKVRRPDLDSGRHWRSEPGS*HCTPAW
Trigger: CCATGCTGGAGTGCAGTGGCATGATCCTGGCTCACT...CCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACTTTATTTGCTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCCGGGAAGTGGAGGCTaGAGTGAGCCAGGATCATGC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLPGSGG*SEPGSC
Trigger: GCATGATCCTGGCTCACTGCAGCCTCCACTTCCCGG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTCAGAAATATGTTTTaGTGTCTGACGACCCTTCAC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPFRNMF*CLTTLH
Trigger: GTGAAGGGTCGTCAGACACCAAAACATATTTCTGAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GTGTACGGCCCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTCAGAATTCTGTGTGGTaGTGGCTGGCCAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: VYGPEVQSLVGVDHLGSFQNSVW*WLASFH
Trigger: ATGGAAGCTGGCCAGCCACCACCACACAGAATTCTG...AAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGGCCGTACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACATTTCTTTACACTTTaGGGCAGCTGTGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPHFFTL*GSCDLN
Trigger: ATTGAGATCACAGCTGCCCCAAAGTGTAAAGAAATG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAGGTGCGGTAAAATTTaGATTCTGTATCTCTTGACG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPRCGKI*ILYLLT
Trigger: CGTCAAGAGATACAGAATCCAAATTTTACCGCACCT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTCAGAATCATTCTGTaGACAGCTTCTTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPFRIIL*TASFHR
Trigger: TCTGTGAAAAGAAGCTGTTCACAGAATGATTCTGAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GTCAGTCTGCCATTCTTTAAGACAGCTAAGAGGGGAGGATCTAACTGGGCCTTAGAATGTTGTACTGGGTaGCATGCTGCAGCCAAGACC +
Preference number: 4 (lower is better)
Translates to: VSLPFFKTAKRGGSNWALECCTG*HAAAKT
Trigger: GGTCTTGGCTGCAGCATGTCACCCAGTACAACATTC...TAAGGCCCAGTTAGATCCTCCCCTCTTAGCTGTCTTAAAGAATGGCAGACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAGACTTTTCTGGGATTaGAAGTCAGTATCACTGTAT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPRLFWD*KSVSLY
Trigger: ATACAGTGATACTGACTTTCAATCCCAGAAAAGTCT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGTCAAGTCTGTTTCATaGAGTTCCTTAGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPVKSVS*SSLVFP
Trigger: AGGAAATACTAAGGAACTTCATGAAACAGACTTGAC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATATGTTCAGAGAGCTTaGTTTCCTTATTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPYVQRA*FPYLKL
Trigger: CAGCTTCAAATAAGGAAATCAAGCTCTCTGAACATA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAGATACAGTATTAATTaGCTGAGGCTTGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPRYSIN*LRLAQF
Trigger: AAACTGAGCAAGCCTCAGTCAATTAATACTGTATCT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGGCTCTAAAGAAACATaGTGCATAAACAATCTTCGA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPGSKET*CINNLR
Trigger: TCGAAGATTGTTTATGCATCATGTTTCTTTAGAGCC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTAGACAGAAATTCTTaGCCAGGTGCGGTAAAATTT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPLDRNS*PGAVKF
Trigger: AAATTTTACCGCACCTGGTCAAGAATTTCTGTCTAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTCAACATTTGCCTGTaGTTATTCAAGGCTCTTAAC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPFNICL*LFKALN
Trigger: GTTAAGAGCCTTGAATAATCACAGGCAAATGTTGAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GTGTACGGCCCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTAGCAGTGTACGGCCCTaGAGTACAGTCTTTAGTTGG +
Preference number: 4 (lower is better)
Translates to: VYGPEVQSLVGVDHLGSFSSVRP*STVFSW
Trigger: CCAACTAAAGACTGTACTTCAGGGCCGTACACTGCT...AAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGGCCGTACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAATGTTCAGATTCTTCTaGAGGTTCAGAATTATAGGG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPMFRFF*RFRIIG
Trigger: CCCTATAATTCTGAACCTGCAGAAGAATCTGAACAT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGCTTTACTGCAAGAATaGAGTCTGTATGAGATTCAA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPALLQE*SLYEIQ
Trigger: TTGAATCTCATACAGACTGCATTCTTGCAGTAAAGC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAGAAGTTCCAGATATTaGCTGCTTTACTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPRSSRY*LLYCKN
Trigger: ATTCTTGCAGTAAAGCAGGCAATATCTGGAACTTCT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATATTGGATGTACCTCTaGAGAAGTTTCCTCACTAAT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPYWMYL*RSFLTN
Trigger: ATTAGTGAGGAAACTTCTGCAGAGGTACATCCAATA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTCGATCTTTTATTGTaGCATCTGGAGTGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPFDLLL*HLECFL
Trigger: CAAAAAGCACTCCAGATGGCACAATAAAAGATCGAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACATGTATTTTTCAGGTaGCAACAGCTCAACGTTTTT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPHVFFR*QQLNVF
Trigger: AAAAACGTTGAGCTGTTGCCACCTGAAAAATACATG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACCCTCCTTCATAAACTaGCCAGATAATTTAAGACAT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPPSFIN*PDNLRH
Trigger: ATGTCTTAAATTATCTGGCCAGTTTATGAAGGAGGG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAATTTCCAGTACCAACTaGGACACTTTCTTTCAGTAT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPISSTN*DTFFQY
Trigger: ATACTGAAAGAAAGTGTCCCAGTTGGTACTGGAAAT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATATCCTAAATGCAGGTaGCCCTACCTCAAAATTATT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPYPKCR*PYLKII
Trigger: AATAATTTTGAGGTAGGGCCACCTGCATTTAGGATA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAACAAAGACTTTGGTTaGTCTGCCTGTAGTAATCAA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPNKDFG*SACSNQ
Trigger: TTGATTACTACAGGCAGACCAACCAAAGTCTTTGTT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAATAATGGCCACTTTTTaGGTATCTGCACTACTAGTT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPIMATF*VSALLV
Trigger: AACTAGTAGTGCAGATACCCAAAAAGTGGCCATTAT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAGGGGAGGATCTAACTaGGCCTTAACAGCATACCAC +
Preference number: 4 (lower is better)
Translates to: VRRPDLDSGRHWRLLAAIRGGSN*ALTAYH
Trigger: GTGGTATGCTGTTAAGGCCCAGTTAGATCCTCCCCT...AATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp CTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAGGTGCCACAACTCCTTaGTGGCTGAAATGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LHHLAKHELAVLLVHVMVGATTP*WLKCLL
Trigger: CAGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACC...TACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AATAAAGTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCACACTGCACTCCAGCATaGGCGACAAAGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: NKVRRPDLDSGRHWRLLAHCTPA*ATKQDS
Trigger: GGAGTCTTGCTTTGTCGCCCATGCTGGAGTGCAGTG...TGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACTTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp ATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGGCTAAAAATTTGCTGAAGTaGAGGGGCTCCCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IWILVATGGCLQQLTYEAKNLLK*RGSRGW
Trigger: CCAGCCACGGGAGCCCCTTCACTTCAGCAAATTTTT...AGCCTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614259.2
ENST00000665585.1
ENST00000666593.1
CDS-3UTR TCA 90 bp TCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGAGCAGTGTACGGCCCTaGAGTACAGTCTTTAGTTGG +
Preference number: 4 (lower is better)
Translates to: SSGLRQVWKQTSFWPYKVSSVRP*STVFSW
Trigger: CCAACTAAAGACTGTACTTCAGGGCCGTACACTGCT...CACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470094.1
ENST00000614259.2
CDS-3UTR TCA 90 bp CCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTGTACCAGGAATGATTTaGGCAGTGTACGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: PEVQSLVGVDHLGSFACSVPGMI*AVYGPE
Trigger: TTCAGGGCCGTACACTGCTCAAATCATTCCTGGTAC...ACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp AGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGCAGTGTACGGCCCGTACCAGGAATGATTTaGGCAGTGTACGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: RHQKLVSCTRNDLSSVRPVPGMI*AVYGPE
Trigger: TTCAGGGCCGTACACTGCTCAAATCATTCCTGGTAC...GGGCCGTACACTGCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCAACTCCTTGGTGGCTaGAATGCCTTCTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLQLLGG*NAFCAA
Trigger: GGCTGCACAGAAGGCATTTCAGCCACCAAGGAGTTG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTACTCCAGCCTGGGGGTaGCAAAGCAAGACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SWGGPLGIICMQYMHKLVTPAWG*QSKTLS
Trigger: AGACAGAGTCTTGCTTTGTCACCCCCAGGCTGGAGT...AACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470094.1
CDS-3UTR TCA 90 bp GTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTTTTCCTGCCACCTTGTaGAGAAGGTACTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VRRPDLDSGRHWRLLAAIFPATL*RRYLLL
Trigger: GAGAAGCAAGTACCTTCTTCACAAGGTGGCAGGAAA...AATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000665585.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATCACATGAAGAAATATaGAATAGGGGTATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSHEEI*NRGIFS
Trigger: GGAGAAAATACCCCTATTGCATATTTCTTCATGTGA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAATTTGTGTAACAAGTTaGAGGACTTTTTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPICVTS*RTFCCF
Trigger: GAAACAGCAAAAAGTCCTGCAACTTGTTACACAAAT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACCTTATGTGAATGCGTaGTACATTCATCATTATCTA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPPYVNA*YIHHYL
Trigger: TAGATAATGATGAATGTAGCACGCATTCACATAAGG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATCTAAAATGGAAACTTaGTTTCCACTTGCTGTACTA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSKMET*FPLAVL
Trigger: TAGTACAGCAAGTGGAAAGCAAGTTTCCATTTTAGA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TCTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTTTGGCCTCCTACTGCTaGTTTCAGAGAGATTCGAGG +
Preference number: 4 (lower is better)
Translates to: SAPSCKARTCCLVSARDGLASYC*FQRDSR
Trigger: CCTCGAATCTCTCTGAAAGCAGCAGTAGGAGGCCAA...ACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACACTTTTTGGGTATCTaGACTACTAGTTTTATTGCT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPHFLGI*TTSFIA
Trigger: AGCAATAAAACTAGTAGTGCAGATACCCAAAAAGTG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACCACTGTATAGGGTATaGTCTTTGAATAATTACATC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPPLYRV*SLNNYI
Trigger: GATGTAATTATTCAAAGAGCATACCCTATACAGTGG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTTGCATGCAGTATATaGATAAGCTTGTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPFACSI*ISLFSA
Trigger: AGCAGAAAACAAGCTTATGCATATACTGCATGCAAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCCTTGGTGGCTGAAATaGCTTCTGTGCAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLPWWLK*LLCSRR
Trigger: TCTCCGGCTGCACAGAAGGCATTTCAGCCACCAAGG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTGGGTATTTATCAATaGAAGTTCTTCGTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPLGIYQ*KFFVSY
Trigger: ATAGCTGACGAAGAACTTGCATTGATAAATACCCAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp CTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTCCAGGATCATGCCACTaGACTCCAGCATGGGCGACA +
Preference number: 4 (lower is better)
Translates to: LAKHELAVLLVHVMVNMVPGSCH*TPAWAT
Trigger: TGTCGCCCATGCTGGAGTGCAGTGGCATGATCCTGG...AACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATGGATCAGTATCATTTaGTTCCACTTCAGATACAAA +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPWISII*FHFRYK
Trigger: TTTGTATCTGAAGTGGAACCAAATGATACTGATCCA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTCTGTGTGGTGGTGGCTaGCCAGCTTCCATTATCAAT +
Preference number: 4 (lower is better)
Translates to: VIWAETGVETDFLLAIQSLCGGG*PASIIN
Trigger: ATTGATAATGGAAGCTGGCCAGCCACCACCACACAG...ACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAATTTGCAAATGTAAGTaGTGCTTCAAAAGCATTTGC +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPICKCK*CFKSIC
Trigger: GCAAATGCTTTTGAAGCACCACTTACATTTGCAAAT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATGGAAAAGACTTGCTTaGTACTATCTTCTATTTCAG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPWKRLA*YYLLFQ
Trigger: CTGAAATAGAAGATAGTACCAAGCAAGTCTTTTCCA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCAGACTGCCTGGCTGTaGAAAGACGCGTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLQTAWL*KDALPL
Trigger: CAAAGGCAACGCGTCTTTCCACAGCCAGGCAGTCTG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp ATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGGCTCTTTGGATCCACACCTaGAGTGTCACACAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: IWILVATGGCLQQLTYEALWIHT*SVTQSP
Trigger: AGGGCTCTGTGTGACACTCCAGGTGTGGATCCAAAG...AGCCTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp GACGAAAGGGGCAAGTCTGTCATTCTGTCATCACGATGGTCATGTTTCCTGGAAGATTCTGGTCGCCACTaGAGGTTGCTTGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: DERGKSVILSSRWSCFLEDSGRH*RLLAAI
Trigger: AATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATC...TTCCAGGAAACATGACCATCGTGATGACAGAATGACAGACTTGCCCCTTTCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666593.1
CDS-3UTR CCA 90 bp GTGTACGGCCCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTAGTACAGTCTTTAGTTaGGGTGGACCACTTGGGATC +
Preference number: 4 (lower is better)
Translates to: VYGPEVQSLVGVDHLGSFSTVFS*GGPLGI
Trigger: GATCCCAAGTGGTCCACCCCAACTAAAGACTGTACT...AAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGGCCGTACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAAACAGACTTCCTTTTaGCCATACAAAGTGATAAAG +
Preference number: 4 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPKQTSF*PYKVIK
Trigger: CTTTATCACTTTGTATGGCCAAAAGGAAGTCTGTTT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp ATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGGCTGCCACAACTCCTTGGTaGCTGAAATGCCTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: IWILVATGGCLQQLTYEAATTPW*LKCLLC
Trigger: GCACAGAAGGCATTTCAGCCACCAAGGAGTTGTGGC...AGCCTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp TCTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTCACATTCTTCCGTACTaGCCTGGGAACTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SAPSCKARTCCLVSARDGHILPY*PGNSPV
Trigger: AACAGGAGAGTTCCCAGGCCAGTACGGAAGAATGTG...ACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR CAA 72 bp AGAGGAAAAGGTCTAGGGTCAGGAAAGAATCCAAGTTaGGTATACCAGCGAGCAGGCCGAGTACTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: RGKGLGSGKNPS*VYQRAGRVLLA
Trigger: TGCTAACAGTACTCGGCCTGCTCGCTGGTATACCAAACTTGGATTCTTTCCTGACCCTAGACCTTTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGAATGTTGTACTGGGTaGCATGCTGCAGCCAAGACC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLECCTG*HAAAKT
Trigger: GGTCTTGGCTGCAGCATGTCACCCAGTACAACATTC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTGTATACAGCTGTTTATaGGAACACGCAGAGGGAACT +
Preference number: 4 (lower is better)
Translates to: VRRPDLDSGRHWRLLAAIVYSCL*EHAEGT
Trigger: AGTTCCCTCTGCGTGTTCTCATAAACAGCTGTATAC...AATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCATCATTGGAGGGTATaGGCCATCCACCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLHHWRV*AIHHQP
Trigger: TGGCTGATGGTGGATGGCTCATACCCTCCAATGATG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAAAAATTTGCTGAAGTaGAGGGGCTCCCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLKNLLK*RGSRGW
Trigger: CCAGCCACGGGAGCCCCTTCACTTCAGCAAATTTTT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp CTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGAAAAATTTGCTGAAGTaGAGGGGCTCCCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLFSRFHGLPNFQLDLSLKNLLK*RGSRGW
Trigger: CCAGCCACGGGAGCCCCTTCACTTCAGCAAATTTTT...CAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp TCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGGATCTAAAAATTTGCTaGAGTGAAGGGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: SSGLRQVWKQTSFWPYKVDLKIC*SEGAPV
Trigger: CACGGGAGCCCCTTCACTTCAGCAAATTTTTAGATC...CACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000470094.1
ENST00000614259.2
CDS-3UTR TCA 90 bp GACGAAAGGGGCAAGTCTGTCATTCTGTCATCACGATGGTCATGTTTCCTGGAAGATCTAAAAATTTGCTaGAGTGAAGGGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: DERGKSVILSSRWSCFLEDLKIC*SEGAPV
Trigger: CACGGGAGCCCCTTCACTTCAGCAAATTTTTAGATC...TTCCAGGAAACATGACCATCGTGATGACAGAATGACAGACTTGCCCCTTTCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000666593.1
CDS-3UTR TCA 90 bp CTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTCAACTCCTTGGTGGCTaGAATGCCTTCTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LAKHELAVLLVHVMVNMVQLLGG*NAFCAA
Trigger: GGCTGCACAGAAGGCATTTCAGCCACCAAGGAGTTG...AACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp CCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTTCTGAGATAATCTTCTaGACTGGTGGGAGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: PEVQSLVGVDHLGSFACSSEIIF*TGGSSP
Trigger: AGGACTGCTCCCACCAGTTCAGAAGATTATCTCAGA...ACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp GTGTACGGCCCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTTGCAAAGCACGAACTTaGTGTCTTGTTAGTGCACGT +
Preference number: 4 (lower is better)
Translates to: VYGPEVQSLVGVDHLGSFCKART*CLVSAR
Trigger: ACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCA...AAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGGCCGTACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp GTGTACGGCCCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGTAAGCTGGGTCTGCTaGATTCTTCACTGCTTCATA +
Preference number: 4 (lower is better)
Translates to: VYGPEVQSLVGVDHLGSFVSWVC*ILHCFI
Trigger: TATGAAGCAGTGAAGAATGCAGCAGACCCAGCTTAC...AAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGGCCGTACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp GTCAGTCTGCCATTCTTTAAGACAGCTAAGAGGGGAGGATCTAACTGGGCCTTAAAGGTAAGCTGGGTCTaGTGCATTCTTCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: VSLPFFKTAKRGGSNWALKVSWV*CILHCF
Trigger: GAAGCAGTGAAGAATGCAGCAGACCCAGCTTACCTT...TAAGGCCCAGTTAGATCCTCCCCTCTTAGCTGTCTTAAAGAATGGCAGACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp GTGTACGGCCCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGTCGCCACTGGAGGTTaGTTGCAGCAATTAACATAT +
Preference number: 4 (lower is better)
Translates to: VYGPEVQSLVGVDHLGSFVATGG*LQQLTY
Trigger: ATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGAC...AAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGGCCGTACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp TCTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTTCTTTTACAGGAGATTaGTACAGCGGCAGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SAPSCKARTCCLVSARDGSFTGD*YSGRVS
Trigger: GCTGACTCTGCCGCTGTACCAATCTCCTGTAAAAGA...ACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCAGAATTCTGTGTGGTaGTGGCTGGCCAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLQNSVW*WLASFH
Trigger: ATGGAAGCTGGCCAGCCACCACCACACAGAATTCTG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCTACAGAATTCTGTGTaGTGGTGGCTGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLQNSV*WWLASF
Trigger: GAAGCTGGCCAGCCACCACCACACAGAATTCTGTAG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp ACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCAGACTGCCTGGCTGTaGAAAGACGCGTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: TLFLLFSRFHGLPNFQLDQTAWL*KDALPL
Trigger: CAAAGGCAACGCGTCTTTCCACAGCCAGGCAGTCTG...ATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCTTTGGATCCACACCTaGAGTGTCACACAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLWIHT*SVTQSP
Trigger: AGGGCTCTGTGTGACACTCCAGGTGTGGATCCAAAG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGCCACAACTCCTTGGTaGCTGAAATGCCTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLATTPW*LKCLLC
Trigger: GCACAGAAGGCATTTCAGCCACCAAGGAGTTGTGGC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGGTGCCACAACTCCTTaGTGGCTGAAATGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLGATTP*WLKCLL
Trigger: CAGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTGTAGTCCCAGCTACTTaGGAGGCTAAGGCACGAGAA +
Preference number: 4 (lower is better)
Translates to: VGVDHLGSFACSICISLFVVPAT*EAKARE
Trigger: TTCTCGTGCCTTAGCCTCCCAAGTAGCTGGGACTAC...AAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470094.1
CDS-3UTR TCA 90 bp CTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTCATCATTGGAGGGTATaGGCCATCCACCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: LAKHELAVLLVHVMVNMVHHWRV*AIHHQP
Trigger: TGGCTGATGGTGGATGGCTCATACCCTCCAATGATG...AACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp GCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTTGCATCATTGGAGGGTATaGGCCATCCACCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: AKHELAVLLVHVMVNMVLHHWRV*AIHHQP
Trigger: TGGCTGATGGTGGATGGCTCATACCCTCCAATGATG...CAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGCAGTGTACGGCCCTaGAGTACAGTCTTTAGTTGG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLSSVRP*STVFSW
Trigger: CCAACTAAAGACTGTACTTCAGGGCCGTACACTGCT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGTACCAGGAATGATTTaGGCAGTGTACGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLVPGMI*AVYGPE
Trigger: TTCAGGGCCGTACACTGCTCAAATCATTCCTGGTAC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp CAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAGTACCAGGAATGATTTaGGCAGTGTACGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: QSLVGVDHLGSFACSICIVPGMI*AVYGPE
Trigger: TTCAGGGCCGTACACTGCTCAAATCATTCCTGGTAC...TATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTCCTGTACCAGGAATaGTTTGAGCAGTGTACGGCC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLFLYQE*FEQCTA
Trigger: GGCCGTACACTGCTCAAATCATTCCTGGTACAGGAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GTTGTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTGTACCAGGAATaGTTTGAGCAGTGTACGGCC +
Preference number: 4 (lower is better)
Translates to: VVTSLDKPCSFCSADSMAFLYQE*FEQCTA
Trigger: GGCCGTACACTGCTCAAATCATTCCTGGTACAGGAA...GGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTGTACTGGGTGACATaGTGCAGCCAAGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLYWVT*CSQDLF
Trigger: GAAGAGGTCTTGGCTGCAGCATGTCACCCAGTACAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTGCAAGATACAGACTaGCTGGCTGTGGAAAGACGC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLQDTD*LAVERR
Trigger: GCGTCTTTCCACAGCCAGGCAGTCTGTATCTTGCAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTTTGCAAGATACAGACTaGCTGGCTGTGGAAAGACGC +
Preference number: 4 (lower is better)
Translates to: GVDHLGSFACSICISLFSLQDTD*LAVERR
Trigger: GCGTCTTTCCACAGCCAGGCAGTCTGTATCTTGCAA...AGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTGGCCTCCTACTGCTaGTTTCAGAGAGATTCGAGG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLASYC*FQRDSR
Trigger: CCTCGAATCTCTCTGAAAGCAGCAGTAGGAGGCCAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCTTGGCCTCCTACTGCTaGTTTCAGAGAGATTCGAGG +
Preference number: 4 (lower is better)
Translates to: VTSLDKPCSFCSADSMAFLASYC*FQRDSR
Trigger: CCTCGAATCTCTCTGAAAGCAGCAGTAGGAGGCCAA...GAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp TCTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTGTAAGCTGGGTCTGCTaGATTCTTCACTGCTTCATA +
Preference number: 4 (lower is better)
Translates to: SAPSCKARTCCLVSARDGVSWVC*ILHCFI
Trigger: TATGAAGCAGTGAAGAATGCAGCAGACCCAGCTTAC...ACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCTGTGTGGTGGTGGCTaGCCAGCTTCCATTATCAAT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLCGGG*PASIIN
Trigger: ATTGATAATGGAAGCTGGCCAGCCACCACCACACAG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp CATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGCTTTGGATCCACACCTaGAGTGTCACACAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: HLAKHELAVLLVHVMVNMLWIHT*SVTQSP
Trigger: AGGGCTCTGTGTGACACTCCAGGTGTGGATCCAAAG...CATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGGGGAGGATCTAACTaGGCCTTAACAGCATACCAC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLRGGSN*ALTAYH
Trigger: GTGGTATGCTGTTAAGGCCCAGTTAGATCCTCCCCT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTAGGGGAGGATCTAACTaGGCCTTAACAGCATACCAC +
Preference number: 4 (lower is better)
Translates to: GVDHLGSFACSICISLFSRGGSN*ALTAYH
Trigger: GTGGTATGCTGTTAAGGCCCAGTTAGATCCTCCCCT...AGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp CTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGACCCTCAAGGTAAGCTaGGTCTGCTGCATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LLFSRFHGLPNFQLDLSLTLKVS*VCCILH
Trigger: GTGAAGAATGCAGCAGACCCAGCTTACCTTGAGGGT...CAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp TTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGACCCTCAAGGTAAGCTaGGTCTGCTGCATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LVGVDHLGSFACSICISLTLKVS*VCCILH
Trigger: GTGAAGAATGCAGCAGACCCAGCTTACCTTGAGGGT...CAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp GGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGATTCTGGTCGCCACTaGAGGTTGCTTGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: GVDHLGSFACSICISLFSDSGRH*RLLAAI
Trigger: AATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATC...AGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGATTCTGGTCGCCACTaGAGGTTGCTTGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLDSGRH*RLLAAI
Trigger: AATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GTGTACGGCCCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTAAAGTGGCCCTCTTTTaGACTAGCAGAAAACACAGA +
Preference number: 4 (lower is better)
Translates to: VYGPEVQSLVGVDHLGSFKVALF*TSRKHR
Trigger: TCTGTGTTTTCTGCTAGTCCAAAAGAGGGCCACTTT...AAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGGCCGTACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp AAGTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAATTGGGGTGGACCACTTaGGATCATTTGCATGCAGTA +
Preference number: 4 (lower is better)
Translates to: KSSGLRQVWKQTSFWPYKLGWTT*DHLHAV
Trigger: TACTGCATGCAAATGATCCCAAGTGGTCCACCCCAA...TTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470094.1
ENST00000614259.2
CDS-3UTR CCA 90 bp CTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGTTGGGGTGGACCACTTaGGATCATTTGCATGCAGTA +
Preference number: 4 (lower is better)
Translates to: LIWILVATGGCLQQLTYELGWTT*DHLHAV
Trigger: TACTGCATGCAAATGATCCCAAGTGGTCCACCCCAA...CTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp GGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTCTTCCGTACTGGCCTaGGAACTCTCCTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GGPLGIICMQYMHKLVFCSSVLA*ELSCSL
Trigger: CAAAGAACAGGAGAGTTCCCAGGCCAGTACGGAAGA...GCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
3UTR CAA 72 bp GGCCCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTaGGGATCATTTGCATGCAGTATATGCATAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GPEVQSLVGVDH*GSFACSICISL
Trigger: CAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
3UTR CAA 72 bp CATTCTTCCGTACTGGCCTGGGAACTCTCCTGTTCTTaGATCAGAGATGTAGTACAACGTCGTTTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: HSSVLAWELSCS*IRDVVQRRFSL
Trigger: CAGACTGAAACGACGTTGTACTACATCTCTGATCAAAGAACAGGAGAGTTCCCAGGCCAGTACGGAAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCCTGAAAGGGTTAGTTaGGACCATTCACAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLPERVS*DHSQAK
Trigger: TTTGGCCTGTGAATGGTCTCAACTAACCCTTTCAGG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp CTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAATGGGGCATTCATTATaGCATGAAGATCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: LHHLAKHELAVLLVHVMVMGHSL*HEDQHL
Trigger: GAGATGCTGATCTTCATGTCATAATGAATGCCCCAT...TACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTGGAAGGTCACTAGTTaGTTTCCAGTACCAACTGGG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLWKVTS*FPVPTG
Trigger: CCCAGTTGGTACTGGAAATCAACTAGTGACCTTCCA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AAGACTTTGAAGTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGACTTCCACACGGTTGTaGCATCCCTTGATAAACCTT +
Preference number: 4 (lower is better)
Translates to: KTLKSSGLRQVWKQTSFWTSTRL*HPLINL
Trigger: AAGGTTTATCAAGGGATGTCACAACCGTGTGGAAGT...CCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGACTTCAAAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGATCTAAAAATTTGCTaGAGTGAAGGGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLDLKIC*SEGAPV
Trigger: CACGGGAGCCCCTTCACTTCAGCAAATTTTTAGATC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCGATCTAAAAATTTGCTaGAGTGAAGGGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: FLLFSRFHGLPNFQLDLSDLKIC*SEGAPV
Trigger: CACGGGAGCCCCTTCACTTCAGCAAATTTTTAGATC...GCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp GTCAGTCTGCCATTCTTTAAGACAGCTAAGAGGGGAGGATCTAACTGGGCCTTAATTGTAACATTCGTCTaGCAAATAGACGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: VSLPFFKTAKRGGSNWALIVTFV*QIDERG
Trigger: GCCCCTTTCGTCTATTTGTCAGACGAATGTTACAAT...TAAGGCCCAGTTAGATCCTCCCCTCTTAGCTGTCTTAAAGAATGGCAGACTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp GTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTTCCTGTACCAGGAATaGTTTGAGCAGTGTACGGCC +
Preference number: 4 (lower is better)
Translates to: VDHLGSFACSICISLFSAFLYQE*FEQCTA
Trigger: GGCCGTACACTGCTCAAATCATTCCTGGTACAGGAA...AGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTCTGAGATAATCTTCTaGACTGGTGGGAGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLSEIIF*TGGSSP
Trigger: AGGACTGCTCCCACCAGTTCAGAAGATTATCTCAGA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TCTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAACGTCGTTTCAGTCTaGGATAATCTTCTGAACTGG +
Preference number: 4 (lower is better)
Translates to: SAPSCKARTCCLVSARDGNVVSV*DNLLNW
Trigger: CCAGTTCAGAAGATTATCTCAGACTGAAACGACGTT...ACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTCACACTGTCCTTCCTaGAGGCATGACAGAGAATCA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLSHCPS*RHDRES
Trigger: TGATTCTCTGTCATGCCTGCAGGAAGGACAGTGTGA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTACTGGGTGACATGCTaGAGCCAAGACCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLYWVTC*SQDLFF
Trigger: AAAGAAGAGGTCTTGGCTGCAGCATGTCACCCAGTA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp CTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGGAAGATCAGCATCTCTaGATTCCTCAGAAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LIWILVATGGCLQQLTYEEDQHL*IPQKWS
Trigger: AGACCACTTCTGAGGAATGCAGAGATGCTGATCTTC...CTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGACTGGCTATCCTAAATaGAGGTGGCCCTACCTCAAA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLTGYPK*RWPYLK
Trigger: TTTGAGGTAGGGCCACCTGCATTTAGGATAGCCAGT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AATAAAGTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCATGCTTCATAAAGCTCTaGACCATCTTGCAAAGCACG +
Preference number: 4 (lower is better)
Translates to: NKVRRPDLDSGRHWRLLACFIKL*TILQST
Trigger: CGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAGCA...TGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACTTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp CTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGGTAAGCTGGGTCTGCTaGATTCTTCACTGCTTCATA +
Preference number: 4 (lower is better)
Translates to: LIWILVATGGCLQQLTYEVSWVC*ILHCFI
Trigger: TATGAAGCAGTGAAGAATGCAGCAGACCCAGCTTAC...CTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp TTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCAAGGTAAGCTGGGTCTaGTGCATTCTTCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: FLLFSRFHGLPNFQLDLSKVSWV*CILHCF
Trigger: GAAGCAGTGAAGAATGCAGCAGACCCAGCTTACCTT...GCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAAGGTAAGCTGGGTCTaGTGCATTCTTCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLKVSWV*CILHCF
Trigger: GAAGCAGTGAAGAATGCAGCAGACCCAGCTTACCTT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCAAGGTAAGCTGGGTCTaGTGCATTCTTCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: VTSLDKPCSFCSADSMAFKVSWV*CILHCF
Trigger: GAAGCAGTGAAGAATGCAGCAGACCCAGCTTACCTT...GAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGTGTTTCGTATTTGGTaGCACAACTCCTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLVFRIW*HNSLVA
Trigger: AGCCACCAAGGAGTTGTGGCACCAAATACGAAACAC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTCTTTTACAGGAGATTaGTACAGCGGCAGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLSFTGD*YSGRVS
Trigger: GCTGACTCTGCCGCTGTACCAATCTCCTGTAAAAGA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAATTCTGTGTGGTGGTaGCTGGCCAGCTTCCATTAT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLNSVWW*LASFHY
Trigger: ATAATGGAAGCTGGCCAGCCACCACCACACAGAATT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTATGTGTGGCATGACTTaGCAGTTTAGAATCTGTCAG +
Preference number: 4 (lower is better)
Translates to: VIWAETGVETDFLLAIQSMCGMT*QFRICQ
Trigger: CTGACAGATTCTAAACTGCCAAGTCATGCCACACAT...ACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGAAAGAATCCAAGTTTaGTATACCAGCGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLERIQV*YTSEQA
Trigger: GGCCTGCTCGCTGGTATACCAAACTTGGATTCTTTC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCGAAAGAATCCAAGTTTaGTATACCAGCGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: VTSLDKPCSFCSADSMAFERIQV*YTSEQA
Trigger: GGCCTGCTCGCTGGTATACCAAACTTGGATTCTTTC...GAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp CTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGGAAAGAATCCAAGTTTaGTATACCAGCGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLFSRFHGLPNFQLDLSLERIQV*YTSEQA
Trigger: GGCCTGCTCGCTGGTATACCAAACTTGGATTCTTTC...CAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp GCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTTGACCCTCAAGGTAAGCTaGGTCTGCTGCATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: AKHELAVLLVHVMVNMVLTLKVS*VCCILH
Trigger: GTGAAGAATGCAGCAGACCCAGCTTACCTTGAGGGT...CAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp TTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTGATTCTGGTCGCCACTaGAGGTTGCTTGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: LFSRFHGLPNFQLDLSLFDSGRH*RLLAAI
Trigger: AATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATC...AAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp GTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCAGTACAGTCTTTAGTTaGGGTGGACCACTTGGGATC +
Preference number: 4 (lower is better)
Translates to: VTSLDKPCSFCSADSMAFSTVFS*GGPLGI
Trigger: GATCCCAAGTGGTCCACCCCAACTAAAGACTGTACT...GAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTGGGTGTTTCGTATTTaGTGCCACAACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLWVFRI*CHNSLV
Trigger: CACCAAGGAGTTGTGGCACCAAATACGAAACACCCA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTGATGGTCATGTTTCCTaGAAATTTCAGTATCCTCAC +
Preference number: 4 (lower is better)
Translates to: VRRPDLDSGRHWRLLAAIDGHVS*KFQYPH
Trigger: GTGAGGATACTGAAATTTCCAGGAAACATGACCATC...AATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666593.1
3UTR CAA 72 bp GAAAAATCTCCAGCAAATAAAGTAAGAAGGCCTGATTaGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: EKSPANKVRRPD*DSGRHWRLLAA
Trigger: TGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACTTTATTTGCTGGAGATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614259.2
ENST00000665585.1
ENST00000666593.1
CDS-3UTR TCA 90 bp CCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGTTTTGGTGTCTaGCGACCCTTCACAAACTTT +
Preference number: 4 (lower is better)
Translates to: PEVQSLVGVDHLGSFACSICFGV*RPFTNF
Trigger: AAAGTTTGTGAAGGGTCGTCAGACACCAAAACATAT...ACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp TCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGCTCTCAAAGGGCTTCTaGTTTGCTACATTTGAATCT +
Preference number: 4 (lower is better)
Translates to: SSGLRQVWKQTSFWPYKVLSKGF*FATFES
Trigger: AGATTCAAATGTAGCAAATCAGAAGCCCTTTGAGAG...CACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp CAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAGGAGTCCTCCTTCTGTaGGCAAACAGTATGTATTTC +
Preference number: 4 (lower is better)
Translates to: QSLVGVDHLGSFACSICIGVLLL*ANSMYF
Trigger: GAAATACATACTGTTTGCTCACAGAAGGAGGACTCC...TATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp GTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTAGACATATGTTGTGCTaGTCAGTAAATAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: VIWAETGVETDFLLAIQSRHMLC*SVNSKS
Trigger: GGACTTGCTATTTACTGATCAGCACAACATATGTCT...ACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTCCCGCTAGCTGTATaGAAACCCAATAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLFPLAV*KPNRVG
Trigger: ACCTACTCTATTGGGTTTTCATACAGCTAGCGGGAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCCCGCTAGCTGTATaGAAACCCAATAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GGPLGIICMQYMHKLVFCFPLAV*KPNRVG
Trigger: ACCTACTCTATTGGGTTTTCATACAGCTAGCGGGAA...GCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGGGTCTTTGCCCATTaGTGGCTAAAACTGGTGATT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLRVFAH*WLKLVI
Trigger: AATCACCAGTTTTAGCCATCAATGGGCAAAGACCCT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTTTTATTTTTGCAGGGTaGAGAGCTAGTCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: VIWAETGVETDFLLAIQSFIFAG*RASHKF
Trigger: GAACTTGTGACTAGCTCTTCACCCTGCAAAAATAAA...ACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp TCTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTGATGAGACTGACTTATaGAGCTTCCCTATACTACAT +
Preference number: 4 (lower is better)
Translates to: SAPSCKARTCCLVSARDGDETDL*SFPILH
Trigger: ATGTAGTATAGGGAAGCTTCATAAGTCAGTCTCATC...ACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGGATTCTGTATCTCTTaGCGTTCCTTAGTTGTGCGA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLGFCIS*RSLVVR
Trigger: TCGCACAACTAAGGAACGTCAAGAGATACAGAATCC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TCTCCAGCAAATAAAGTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGTATCTGTATTTTAGTTaGAGAAGCACCCTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SPANKVRRPDLDSGRHWRYLYFS*RSTLSG
Trigger: CCCAGAAAGGGTGCTTCTTCAACTAAAATACAGATA...CCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACTTTATTTGCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCATTTCCTCCATCACTaGAAAGCGATGATAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLHFLHH*KAMIRA
Trigger: TGCCCTTATCATCGCTTTTCAGTGATGGAGGAAATG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp CTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGATAAAGGACCATTTCCTCCATCACTaGAAAGCGATGATAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LRQVWKQTSFWPYKVIKDHFLHH*KAMIRA
Trigger: TGCCCTTATCATCGCTTTTCAGTGATGGAGGAAATG...GTCCTTTATCACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGACTTCCACACGGTTGTaGCATCCCTTGATAAACCTT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLTSTRL*HPLINL
Trigger: AAGGTTTATCAAGGGATGTCACAACCGTGTGGAAGT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp CTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGTTGTTGAATGTCTCTTaGAAGTGGCCCTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: LIWILVATGGCLQQLTYELLNVS*KWPSFG
Trigger: TCCAAAAGAGGGCCACTTTCAAGAGACATTCAACAA...CTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614259.2
ENST00000665585.1
ENST00000666593.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAAGTGGAGGCTGCAGTaGGCCAGGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYKWRLQ*ARIMPL
Trigger: CAGTGGCATGATCCTGGCTCACTGCAGCCTCCACTT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGAAGATCAGCATCTCTaGATTCCTCAGAAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLEDQHL*IPQKWS
Trigger: AGACCACTTCTGAGGAATGCAGAGATGCTGATCTTC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCTTCAAATTGCTTGCTaGTGTCTACCTGACCAATCG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLQIAC*CLPDQS
Trigger: CGATTGGTCAGGTAGACAGCAGCAAGCAATTTGAAG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTACTGGCTATCCTAAATaGAGGTGGCCCTACCTCAAA +
Preference number: 4 (lower is better)
Translates to: VDHLGSFACSICISLFSATGYPK*RWPYLK
Trigger: TTTGAGGTAGGGCCACCTGCATTTAGGATAGCCAGT...AGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp AGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTCAGAGTGGATGTTTTTaGAAGATACAGACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SWGGPLGIICMQYMHKLVQSGCF*KIQTAW
Trigger: CCAGGCAGTCTGTATCTTGCAAAAACATCCACTCTG...AACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGGCACATTCCATAGCTaGCAGTTTCCATATGATCCA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLGTFHS*QFPYDP
Trigger: TGGATCATATGGAAACTGGCAGCTATGGAATGTGCC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTGCAAAGCACGAACTTaGTGTCTTGTTAGTGCACGT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLCKART*CLVSAR
Trigger: ACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCTGCTTCATAAAGCTCTaGACCATCTTGCAAAGCACG +
Preference number: 4 (lower is better)
Translates to: VTSLDKPCSFCSADSMAFCFIKL*TILQST
Trigger: CGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAGCA...GAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTGCTTCATAAAGCTCTaGACCATCTTGCAAAGCACG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLCFIKL*TILQST
Trigger: CGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAGCA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTGCTGCATTCTTCACTaGTTCATAAAGCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLCCILH*FIKLCT
Trigger: GGTGCAGAGCTTTATGAAGCAGTGAAGAATGCAGCA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGTCGCCACTGGAGGTTaGTTGCAGCAATTAACATAT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLVATGG*LQQLTY
Trigger: ATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGAC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTGTGTTTCGTATTTGGTaGCACAACTCCTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LFSRFHGLPNFQLDLSLFVFRIW*HNSLVA
Trigger: AGCCACCAAGGAGTTGTGGCACCAAATACGAAACAC...AAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp CTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAACCCTTCACAAACTTTaGTGTATGAAACAAACTCCC +
Preference number: 4 (lower is better)
Translates to: LHHLAKHELAVLLVHVMVTLHKL*CMKQTP
Trigger: GGGAGTTTGTTTCATACACCAAAGTTTGTGAAGGGT...TACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp GTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTAATTCTGTGTGGTGGTaGCTGGCCAGCTTCCATTAT +
Preference number: 4 (lower is better)
Translates to: VDHLGSFACSICISLFSANSVWW*LASFHY
Trigger: ATAATGGAAGCTGGCCAGCCACCACCACACAGAATT...AGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AAGACTTTGAAGTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGGTTTACACAGTGCTCTaGGTTTCTCTTATCAACACG +
Preference number: 4 (lower is better)
Translates to: KTLKSSGLRQVWKQTSFWVYTVL*VSLINT
Trigger: CGTGTTGATAAGAGAAACCCAGAGCACTGTGTAAAC...CCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGACTTCAAAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp CGAAAGGGGCAAGTCTGTCATTCTGTCATCACGATGGTCATGTTTCCTGGAAATAAAGTGGCCCTCTTTTaGACTAGCAGAAAACACAGA +
Preference number: 4 (lower is better)
Translates to: RKGQVCHSVITMVMFPGNKVALF*TSRKHR
Trigger: TCTGTGTTTTCTGCTAGTCCAAAAGAGGGCCACTTT...ATTTCCAGGAAACATGACCATCGTGATGACAGAATGACAGACTTGCCCCTTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000666593.1
CDS-3UTR CCA 90 bp TTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTTTGGGGTGGACCACTTaGGATCATTTGCATGCAGTA +
Preference number: 4 (lower is better)
Translates to: LFSRFHGLPNFQLDLSLFLGWTT*DHLHAV
Trigger: TACTGCATGCAAATGATCCCAAGTGGTCCACCCCAA...AAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp TTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTAGTACAGTCTTTAGTTaGGGTGGACCACTTGGGATC +
Preference number: 4 (lower is better)
Translates to: LFSRFHGLPNFQLDLSLFSTVFS*GGPLGI
Trigger: GATCCCAAGTGGTCCACCCCAACTAAAGACTGTACT...AAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
3UTR CAA 72 bp GCTCTGCACCATCTTGCAAAGCACGAACTTGCTGTCTaGTTAGTGCACGTGATGGTAAATATGGTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: ALHHLAKHELAV*LVHVMVNMVLL
Trigger: CAACAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGAATGCAGTCTGTATaGGATTCAAGATGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLRMQSV*DSRCCS
Trigger: AGAGCAGCATCTTGAATCTCATACAGACTGCATTCT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTTGATACCCTGAAATaGAGAAGCCACTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLFDTLK*RSHWRS
Trigger: ACTTCTCCAGTGGCTTCTTCATTTCAGGGTATCAAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGAGACTTTTCTGGGATTaGAAGTCAGTATCACTGTAT +
Preference number: 4 (lower is better)
Translates to: SSGLRQVWKQTSFWPYKVRLFWD*KSVSLY
Trigger: ATACAGTGATACTGACTTTCAATCCCAGAAAAGTCT...CACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGATGGGGCATTCATTATaGCATGAAGATCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLMGHSL*HEDQHL
Trigger: GAGATGCTGATCTTCATGTCATAATGAATGCCCCAT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp ATAAGGCTTCTAGTCTCTTTTGTTGGGCCTCCACATATTTTGCTGCTTCCTTTTTGGAAGGTCACTAGTTaGTTTCCAGTACCAACTGGG +
Preference number: 4 (lower is better)
Translates to: IRLLVSFVGPPHILLLPFWKVTS*FPVPTG
Trigger: CCCAGTTGGTACTGGAAATCAACTAGTGACCTTCCA...AAAAGGAAGCAGCAAAATATGTGGAGGCCCAACAAAAGAGACTAGAAGCCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp GTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTAGGGTCTTTGCCCATTaGTGGCTAAAACTGGTGATT +
Preference number: 4 (lower is better)
Translates to: VDHLGSFACSICISLFSARVFAH*WLKLVI
Trigger: AATCACCAGTTTTAGCCATCAATGGGCAAAGACCCT...AGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTGTCTAGACGTAGGTaGATAGTGAAGACTATGCTC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLSRRR*IVKTML
Trigger: GAGCATAGTCTTCACTATTCACCTACGTCTAGACAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGAGAATGTGTGGCATaGCTTGGCAGTTTAGAATCT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLRECVA*LGSLES
Trigger: AGATTCTAAACTGCCAAGTCATGCCACACATTCTCT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp CTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTATTCAACATTTGCCTGTaGTTATTCAAGGCTCTTAAC +
Preference number: 4 (lower is better)
Translates to: LHHLAKHELAVLLVHVMVFNICL*LFKALN
Trigger: GTTAAGAGCCTTGAATAATCACAGGCAAATGTTGAA...TACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp CTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTACTTCCACACGGTTGTaGCATCCCTTGATAAACCTT +
Preference number: 4 (lower is better)
Translates to: LAKHELAVLLVHVMVNMVTSTRL*HPLINL
Trigger: AAGGTTTATCAAGGGATGTCACAACCGTGTGGAAGT...AACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp GACGAAAGGGGCAAGTCTGTCATTCTGTCATCACGATGGTCATGTTTCCTGGAATCAGAACAAGATGGCTaGAAGTCTGGATCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: DERGKSVILSSRWSCFLESEQDG*KSGSKN
Trigger: ATTTTTAGATCCAGACTTTCAGCCATCTTGTTCTGA...TTCCAGGAAACATGACCATCGTGATGACAGAATGACAGACTTGCCCCTTTCGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666593.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGATTGTAACATTCGTCTaGCAAATAGACGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLIVTFV*QIDERG
Trigger: GCCCCTTTCGTCTATTTGTCAGACGAATGTTACAAT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp CTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGATAAAGGACATTGTAACATTCGTCTaGCAAATAGACGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LRQVWKQTSFWPYKVIKDIVTFV*QIDERG
Trigger: GCCCCTTTCGTCTATTTGTCAGACGAATGTTACAAT...GTCCTTTATCACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470094.1
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTGTTGAATGTCTCTTaGAAGTGGCCCTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLLNVS*KWPSFG
Trigger: TCCAAAAGAGGGCCACTTTCAAGAGACATTCAACAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp CCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGAGCAGTGTACGGCCCTaGAGTACAGTCTTTAGTTGG +
Preference number: 4 (lower is better)
Translates to: PNFQLDLSLFLIIQHLPVSSVRP*STVFSW
Trigger: CCAACTAAAGACTGTACTTCAGGGCCGTACACTGCT...CACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAACGTCGTTTCAGTCTaGGATAATCTTCTGAACTGG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLNVVSV*DNLLNW
Trigger: CCAGTTCAGAAGATTATCTCAGACTGAAACGACGTT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AATAAAGTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCATGTCACACAGAGCCCTaGACAACTATAAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: NKVRRPDLDSGRHWRLLACHTEP*TTIKFF
Trigger: GAAGAATTTTATAGTTGTTCAGGGCTCTGTGTGACA...TGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp GGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCGGCAGAGTCAGCCCTTaGTCTTTGAATATTATTGGA +
Preference number: 4 (lower is better)
Translates to: GGPLGIICMQYMHKLVFCGRVSP*SLNIIG
Trigger: TCCAATAATATTCAAAGAGCAAGGGCTGACTCTGCC...GCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp AGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGCAGTGTACGGCCCGCTTTACTGCAAGAATaGAGTCTGTATGAGATTCAA +
Preference number: 4 (lower is better)
Translates to: RHQKLVSCTRNDLSSVRPALLQE*SLYEIQ
Trigger: TTGAATCTCATACAGACTGCATTCTTGCAGTAAAGC...GGGCCGTACACTGCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp GATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTACTGGGTGACATGCTaGAGCCAAGACCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: DKPCSFCSADSMAFLISNYWVTC*SQDLFF
Trigger: AAAGAAGAGGTCTTGGCTGCAGCATGTCACCCAGTA...GTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTACCTTCAAATTGCTTaGTGCTGTCTACCTGACCAA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLYLQIA*CCLPDQ
Trigger: TTGGTCAGGTAGACAGCAGCAAGCAATTTGAAGGTA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTGCCTCGTAACAACCTaGCATAATTTTCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLCLVTT*HNFRLA
Trigger: TGCCAAACGAAAATTATGGCAGGTTGTTACGAGGCA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TCTCCAGCAAATAAAGTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGTGTGGAAAGACGCGTTaGCTTTGTTTCTTCTTAATT +
Preference number: 4 (lower is better)
Translates to: SPANKVRRPDLDSGRHWRCGKTR*LCFFLI
Trigger: AATTAAGAAGAAACAAAGGCAACGCGTCTTTCCACA...CCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACTTTATTTGCTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp GGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGTTGCAAGATACAGACTaGCTGGCTGTGGAAAGACGC +
Preference number: 4 (lower is better)
Translates to: GLPNFQLDLSLFLIIQHLLQDTD*LAVERR
Trigger: GCGTCTTTCCACAGCCAGGCAGTCTGTATCTTGCAA...CAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp GCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTTGGGCACATTCCATAGCTaGCAGTTTCCATATGATCCA +
Preference number: 4 (lower is better)
Translates to: AKHELAVLLVHVMVNMVLGTFHS*QFPYDP
Trigger: TGGATCATATGGAAACTGGCAGCTATGGAATGTGCC...CAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp GTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTGGCACATTCCATAGCTaGCAGTTTCCATATGATCCA +
Preference number: 4 (lower is better)
Translates to: VDHLGSFACSICISLFSAGTFHS*QFPYDP
Trigger: TGGATCATATGGAAACTGGCAGCTATGGAATGTGCC...AGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp GTTGTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCGAGAACAAGTGTTTTTaGAGCTGTGTCATCCCTTTC +
Preference number: 4 (lower is better)
Translates to: VVTSLDKPCSFCSADSMAENKCF*SCVIPF
Trigger: GAAAGGGATGACACAGCTGCAAAAACACTTGTTCTC...GGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGAGAACAAGTGTTTTTaGAGCTGTGTCATCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLENKCF*SCVIPF
Trigger: GAAAGGGATGACACAGCTGCAAAAACACTTGTTCTC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCGACCAACTGTCAGTCTaGCATTCTTTAAGACAGCTA +
Preference number: 4 (lower is better)
Translates to: GGPLGIICMQYMHKLVFCDQLSV*HSLRQL
Trigger: TAGCTGTCTTAAAGAATGGCAGACTGACAGTTGGTC...GCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp CTTCATAAAGCTCTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGGACCAACTGTCAGTCTaGCATTCTTTAAGACAGCTA +
Preference number: 4 (lower is better)
Translates to: LHKALHHLAKHELAVLLVDQLSV*HSLRQL
Trigger: TAGCTGTCTTAAAGAATGGCAGACTGACAGTTGGTC...CACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGAGCCCACCAGTTCTaGTCCATGAAGAATAATCTT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLRAHQF*SMKNNL
Trigger: AAGATTATTCTTCATGGAGCAGAACTGGTGGGCTCT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGAGAGCCCACCAGTTCTaGTCCATGAAGAATAATCTT +
Preference number: 4 (lower is better)
Translates to: LVGVDHLGSFACSICISLRAHQF*SMKNNL
Trigger: AAGATTATTCTTCATGGAGCAGAACTGGTGGGCTCT...CAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp CATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGTGCAAAGCACGAACTTaGTGTCTTGTTAGTGCACGT +
Preference number: 4 (lower is better)
Translates to: HLAKHELAVLLVHVMVNMCKART*CLVSAR
Trigger: ACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCA...CATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp TTGCCAGTAAATTGTAACATTCGTCTGACAAATAGACGAAAGGGGCAAGTCCTGTGCTGCATTCTTCACTaGTTCATAAAGCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: LPVNCNIRLTNRRKGQVLCCILH*FIKLCT
Trigger: GGTGCAGAGCTTTATGAAGCAGTGAAGAATGCAGCA...CAGGACTTGCCCCTTTCGTCTATTTGTCAGACGAATGTTACAATTTACTGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCCTTGGTGGCTGAAATaGCTTCTGTGCAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYPWWLK*LLCSRR
Trigger: TCTCCGGCTGCACAGAAGGCATTTCAGCCACCAAGG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAGTGAGCCAGGATCATaGCACTGCACTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSEPGS*HCTPAW
Trigger: CCATGCTGGAGTGCAGTGGCATGATCCTGGCTCACT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp CTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTGTGAAGAAGGTACTTaGTTCTCCTTCATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LLFSRFHGLPNFQLDLSLCEEGT*FSFIFH
Trigger: GTGGAAGATGAAGGAGAAGCAAGTACCTTCTTCACA...CAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665585.1
CDS-3UTR GCA 90 bp CATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATGGGCAGTTTCTCCCATaGTGTTCCATGATAGTGAGG +
Preference number: 4 (lower is better)
Translates to: HGLPNFQLDLSLFLIIQHGQFLP*CSMIVR
Trigger: CCTCACTATCATGGAACAGCATGGGAGAAACTGCCC...ATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665585.1
CDS-3UTR GCA 90 bp ATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGGCTCTTCCAATACTCTGTTaGTCCCAAGTTCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: IWILVATGGCLQQLTYEALPILC*SQVPCF
Trigger: AAAACAAGGAACTTGGGAGCAACAGAGTATTGGAAG...AGCCTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666593.1
CDS-3UTR CCA 90 bp GTGTACGGCCCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTCAGCTGATTATAAGATaGTTTCCTTTGTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: VYGPEVQSLVGVDHLGSFQLIIR*FPLWSF
Trigger: AAAACTCCACAAAGGAAACCATCTTATAATCAGCTG...AAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGGCCGTACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp CTTCATAAAGCTCTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGACGGTACAACTTCCTTaGAGATTTTGTCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: LHKALHHLAKHELAVLLVTVQLP*RFCHFH
Trigger: GTGGAAGTGACAAAATCTCCAAGGAAGTTGTACCGT...CACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGGTATTTTCTCCATCTaGGCTCCATTTAGACCTGAA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLGIFSI*APFRPE
Trigger: TTCAGGTCTAAATGGAGCCCAGATGGAGAAAATACC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp ATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGATTCTTCTCTTGTGAGCTaGTCTGAATGTTCGTTACTT +
Preference number: 4 (lower is better)
Translates to: IWAETGVETDFLLAIQSDSSLVS*SECSLL
Trigger: AAGTAACGAACATTCAGACCAGCTCACAAGAGAAGA...ATCACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGTTTACACAGTGCTCTaGGTTTCTCTTATCAACACG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLVYTVL*VSLINT
Trigger: CGTGTTGATAAGAGAAACCCAGAGCACTGTGTAAAC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGATGTGTGGCATGACTTaGCAGTTTAGAATCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLMCGMT*QFRICQ
Trigger: CTGACAGATTCTAAACTGCCAAGTCATGCCACACAT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TCTCCAGCAAATAAAGTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGAACAAAGACTTTGGTTaGTCTGCCTGTAGTAATCAA +
Preference number: 4 (lower is better)
Translates to: SPANKVRRPDLDSGRHWRNKDFG*SACSNQ
Trigger: TTGATTACTACAGGCAGACCAACCAAAGTCTTTGTT...CCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACTTTATTTGCTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCAGACTGCCTGGCTGTaGAAAGACGCGTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYQTAWL*KDALPL
Trigger: CAAAGGCAACGCGTCTTTCCACAGCCAGGCAGTCTG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AATATGGTTTTGTTGTGTTTTCAGAAGTTGATTCCAACCCTCATGGATGACTTTCAGACTGCCTGGCTGTaGAAAGACGCGTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: NMVLLCFQKLIPTLMDDFQTAWL*KDALPL
Trigger: CAAAGGCAACGCGTCTTTCCACAGCCAGGCAGTCTG...AAAGTCATCCATGAGGGTTGGAATCAACTTCTGAAAACACAACAAAACCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665585.1
CDS-3UTR CCA 90 bp CAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAAAGTGGCCCTCTTTTaGACTAGCAGAAAACACAGA +
Preference number: 4 (lower is better)
Translates to: QSLVGVDHLGSFACSICIKVALF*TSRKHR
Trigger: TCTGTGTTTTCTGCTAGTCCAAAAGAGGGCCACTTT...TATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCACTGCACTCCAGCATaGGCGACAAAGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYHCTPA*ATKQDS
Trigger: GGAGTCTTGCTTTGTCGCCCATGCTGGAGTGCAGTG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCTCAGCCCTTGCTCTTTaGATATTATTGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: VTSLDKPCSFCSADSMAFSALAL*ILLELK
Trigger: CTTCAACTCCAATAATATTCAAAGAGCAAGGGCTGA...GAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGATATGTTTTGGTGTCTaGCGACCCTTCACAAACTTT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLICFGV*RPFTNF
Trigger: AAAGTTTGTGAAGGGTCGTCAGACACCAAAACATAT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCTTGCAGCTTCTCTTTaGTTTGTGTTTTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLAASL*FVFSLS
Trigger: AGACAGTGAAAACACAAATCAAAGAGAAGCTGCAAG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCTCTCAAAGGGCTTCTaGTTTGCTACATTTGAATCT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLSKGF*FATFES
Trigger: AGATTCAAATGTAGCAAATCAGAAGCCCTTTGAGAG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGAAAGGGTTAGTTaGGACCATTCACAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GLPNFQLDLSLFLIIQHLPERVS*DHSQAK
Trigger: TTTGGCCTGTGAATGGTCTCAACTAACCCTTTCAGG...CAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp GCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTTGTTTGATACCCTGAAATaGAGAAGCCACTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: AKHELAVLLVHVMVNMVLFDTLK*RSHWRS
Trigger: ACTTCTCCAGTGGCTTCTTCATTTCAGGGTATCAAA...CAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGAATGTTGTACTGGGTaGCATGCTGCAGCCAAGACC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYECCTG*HAAAKT
Trigger: GGTCTTGGCTGCAGCATGTCACCCAGTACAACATTC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGACTGTATTCCACTTTTaGATGTTGTACTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLTVFHF*MLYWVT
Trigger: TGTCACCCAGTACAACATTCAAAAGTGGAATACAGT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp CTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGACTGTATTCCACTTTTaGATGTTGTACTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: LLFSRFHGLPNFQLDLSLTVFHF*MLYWVT
Trigger: TGTCACCCAGTACAACATTCAAAAGTGGAATACAGT...CAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCTTGATTTCCTTATTTaGAGCTGTTCTGAAGCTACC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLDFLI*SCSEAT
Trigger: GGTAGCTTCAGAACAGCTTCAAATAAGGAAATCAAG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCTATGTTCAGAGAGCTTaGTTTCCTTATTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VQSLVGVDHLGSFACSICYVQRA*FPYLKL
Trigger: CAGCTTCAAATAAGGAAATCAAGCTCTCTGAACATA...GCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGACATATGTTGTGCTaGTCAGTAAATAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLRHMLC*SVNSKS
Trigger: GGACTTGCTATTTACTGATCAGCACAACATATGTCT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTTATTTTTGCAGGGTaGAGAGCTAGTCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLFIFAG*RASHKF
Trigger: GAACTTGTGACTAGCTCTTCACCCTGCAAAAATAAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGATGAAGAATATCCTCTaGATCATCCAATGCCTCGTA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLMKNIL*IIQCLV
Trigger: TACGAGGCATTGGATGATTCAGAGGATATTCTTCAT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGCAAAAACCTTATGTaGATGCGTGCTACATTCATC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLSKNLM*MRATFI
Trigger: GATGAATGTAGCACGCATTCACATAAGGTTTTTGCT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGATGAGACTGACTTATaGAGCTTCCCTATACTACAT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLDETDL*SFPILH
Trigger: ATGTAGTATAGGGAAGCTTCATAAGTCAGTCTCATC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AAGTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAATCTTGTGAGCTGGTCTaGATGTTCGTTACTTTTAAA +
Preference number: 4 (lower is better)
Translates to: KSSGLRQVWKQTSFWPYKSCELV*MFVTFK
Trigger: TTTAAAAGTAACGAACATTCAGACCAGCTCACAAGA...TTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTATTTTCTTCTCTTGTaGGCTGGTCTGAATGTTCGT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLYFLLL*AGLNVR
Trigger: ACGAACATTCAGACCAGCTCACAAGAGAAGAAAATA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp ACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATTTGTCTAGACGTAGGTaGATAGTGAAGACTATGCTC +
Preference number: 4 (lower is better)
Translates to: TLFLLFSRFHGLPNFQLDLSRRR*IVKTML
Trigger: GAGCATAGTCTTCACTATTCACCTACGTCTAGACAA...ATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp GTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTAGAGAATGTGTGGCATaGCTTGGCAGTTTAGAATCT +
Preference number: 4 (lower is better)
Translates to: VDHLGSFACSICISLFSARECVA*LGSLES
Trigger: AGATTCTAAACTGCCAAGTCATGCCACACATTCTCT...AGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp ATTACATCAACACAACCAACATTTCCTCCATCACTGAAAAGCGATGATAAGGGCGTATACAGCTGTTTATaGGAACACGCAGAGGGAACT +
Preference number: 4 (lower is better)
Translates to: ITSTQPTFPPSLKSDDKGVYSCL*EHAEGT
Trigger: AGTTCCCTCTGCGTGTTCTCATAAACAGCTGTATAC...GCCCTTATCATCGCTTTTCAGTGATGGAGGAAATGTTGGTTGTGTTGATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCATCATTGGAGGGTATaGGCCATCCACCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYHHWRV*AIHHQP
Trigger: TGGCTGATGGTGGATGGCTCATACCCTCCAATGATG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCCTGCCAGTTTCCATATaGTCCATCTATAGTGATTAT +
Preference number: 4 (lower is better)
Translates to: VQSLVGVDHLGSFACSICLPVSI*SIYSDY
Trigger: ATAATCACTATAGATGGATCATATGGAAACTGGCAG...GCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp CTTCATAAAGCTCTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGTATCTGTATTTTAGTTaGAGAAGCACCCTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LHKALHHLAKHELAVLLVYLYFS*RSTLSG
Trigger: CCCAGAAAGGGTGCTTCTTCAACTAAAATACAGATA...CACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAAAAATTTGCTGAAGTaGAGGGGCTCCCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYKNLLK*RGSRGW
Trigger: CCAGCCACGGGAGCCCCTTCACTTCAGCAAATTTTT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTATTGTAACATTCGTCTaGCAAATAGACGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: VDHLGSFACSICISLFSAIVTFV*QIDERG
Trigger: GCCCCTTTCGTCTATTTGTCAGACGAATGTTACAAT...AGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp ACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATTTGTTGAATGTCTCTTaGAAGTGGCCCTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: TLFLLFSRFHGLPNFQLDLLNVS*KWPSFG
Trigger: TCCAAAAGAGGGCCACTTTCAAGAGACATTCAACAA...ATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp GTTGTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTGTTTTTCTCCTGTTaGACCAGACAAAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VVTSLDKPCSFCSADSMALFFSC*TRQKSL
Trigger: CAAGCTCTTTTGTCTGGTTCAACAGGAGAAAAACAA...GGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGATTCATCCTGACTTTTaGACAGGATGGAACTATAGC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLIHPDF*TGWNYS
Trigger: GCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAAT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp ACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGTTGTACTGGGTGACATaGTGCAGCCAAGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: TGSELVSYHSTFACDYSRLYWVT*CSQDLF
Trigger: GAAGAGGTCTTGGCTGCAGCATGTCACCCAGTACAA...CCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGTATTACCATGACATaGTTCTTGAGCTTTCGCAAC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLSITMT*FLSFRN
Trigger: GTTGCGAAAGCTCAAGAAGCATGTCATGGTAATACT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTCTGAGTTTACACAGTaGTCTGGGTTTCTCTTATCA +
Preference number: 4 (lower is better)
Translates to: LVGVDHLGSFACSICISLSEFTQ*SGFLLS
Trigger: TGATAAGAGAAACCCAGAGCACTGTGTAAACTCAGA...CAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp AAGACTTTGAAGTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGTTCGATCTTTTATTGTaGCATCTGGAGTGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: KTLKSSGLRQVWKQTSFWFDLLL*HLECFL
Trigger: CAAAAAGCACTCCAGATGGCACAATAAAAGATCGAA...CCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGACTTCAAAGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp AAGTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAATGTGGAAAGACGCGTTaGCTTTGTTTCTTCTTAATT +
Preference number: 4 (lower is better)
Translates to: KSSGLRQVWKQTSFWPYKCGKTR*LCFFLI
Trigger: AATTAAGAAGAAACAAAGGCAACGCGTCTTTCCACA...TTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp TCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTGTCGCCACTGGAGGTTaGTTGCAGCAATTAACATAT +
Preference number: 4 (lower is better)
Translates to: SLDKPCSFCSADSMAFLIVATGG*LQQLTY
Trigger: ATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGAC...AATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp AAGTCTGTCATTCTGTCATCACGATGGTCATGTTTCCTGGAAATTTCAGTATCCGTCGCCACTGGAGGTTaGTTGCAGCAATTAACATAT +
Preference number: 4 (lower is better)
Translates to: KSVILSSRWSCFLEISVSVATGG*LQQLTY
Trigger: ATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGAC...GGATACTGAAATTTCCAGGAAACATGACCATCGTGATGACAGAATGACAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666593.1
CDS-3UTR GCA 90 bp AGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGCAGTGTACGGCCCTTAAGGATGAAGAATTaGTCAAAAGGAAACACCACT +
Preference number: 4 (lower is better)
Translates to: RHQKLVSCTRNDLSSVRPLRMKN*SKGNTT
Trigger: AGTGGTGTTTCCTTTTGAGCAATTCTTCATCCTTAA...GGGCCGTACACTGCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGACCCTTCACAAACTTTaGTGTATGAAACAAACTCCC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLTLHKL*CMKQTP
Trigger: GGGAGTTTGTTTCATACACCAAAGTTTGTGAAGGGT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTCAGAAATATGTTTTaGTGTCTGACGACCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLFRNMF*CLTTLH
Trigger: GTGAAGGGTCGTCAGACACCAAAACATATTTCTGAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGCTACAGAATTCTGTGTaGTGGTGGCTGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SFACSICISLFSASLQSMLQNSV*WWLASF
Trigger: GAAGCTGGCCAGCCACCACCACACAGAATTCTGTAG...CATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp TTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGCATTTCTTTACACTTTaGGGCAGCTGTGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: LVGVDHLGSFACSICISLHFFTL*GSCDLN
Trigger: ATTGAGATCACAGCTGCCCCAAAGTGTAAAGAAATG...CAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTCTTCTCTTGTGAGCTaGTCTGAATGTTCGTTACTT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLSSLVS*SECSLL
Trigger: AAGTAACGAACATTCAGACCAGCTCACAAGAGAAGA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCAGGTGCGGTAAAATTTaGATTCTGTATCTCTTGACG +
Preference number: 4 (lower is better)
Translates to: FLLFSRFHGLPNFQLDLSRCGKI*ILYLLT
Trigger: CGTCAAGAGATACAGAATCCAAATTTTACCGCACCT...GCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGATTCGAGGCAGAGTaGATGTTTTTGCAAGATACA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLRFEAE*MFLQDT
Trigger: TGTATCTTGCAAAAACATCCACTCTGCCTCGAATCT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGCCACAACTCCTTGGTaGCTGAAATGCCTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYATTPW*LKCLLC
Trigger: GCACAGAAGGCATTTCAGCCACCAAGGAGTTGTGGC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGGTGCCACAACTCCTTaGTGGCTGAAATGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYGATTP*WLKCLL
Trigger: CAGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGACTTTTCTGGGATTaGAAGTCAGTATCACTGTAT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLRLFWD*KSVSLY
Trigger: ATACAGTGATACTGACTTTCAATCCCAGAAAAGTCT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGTCAAGTCTGTTTCATaGAGTTCCTTAGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLVKSVS*SSLVFP
Trigger: AGGAAATACTAAGGAACTTCATGAAACAGACTTGAC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTGTCAAGTCTGTTTCATaGAGTTCCTTAGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: SWGGPLGIICMQYMHKLVVKSVS*SSLVFP
Trigger: AGGAAATACTAAGGAACTTCATGAAACAGACTTGAC...AACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGATACAGTATTAATTaGCTGAGGCTTGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLRYSIN*LRLAQF
Trigger: AAACTGAGCAAGCCTCAGTCAATTAATACTGTATCT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTGCCAGTAAATTGTAACATTCGTCTGACAAATAGACGAAAGGGGCAAGTCCTGATGAAGAATATCCTCTaGATCATCCAATGCCTCGTA +
Preference number: 4 (lower is better)
Translates to: LPVNCNIRLTNRRKGQVLMKNIL*IIQCLV
Trigger: TACGAGGCATTGGATGATTCAGAGGATATTCTTCAT...CAGGACTTGCCCCTTTCGTCTATTTGTCAGACGAATGTTACAATTTACTGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTCTTGTGAGCTGGTCTaGATGTTCGTTACTTTTAAA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLSCELV*MFVTFK
Trigger: TTTAAAAGTAACGAACATTCAGACCAGCTCACAAGA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTTATTTTCTTCTCTTGTaGGCTGGTCTGAATGTTCGT +
Preference number: 4 (lower is better)
Translates to: LFSRFHGLPNFQLDLSLFYFLLL*AGLNVR
Trigger: ACGAACATTCAGACCAGCTCACAAGAGAAGAAAATA...AAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTCTTTTCCCAAAACATaGATGTTCTCAACAAGTGAC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLSFPKT*MFSTSD
Trigger: GTCACTTGTTGAGAACATTCATGTTTTGGGAAAAGA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTCTTTTCCCAAAACATaGATGTTCTCAACAAGTGAC +
Preference number: 4 (lower is better)
Translates to: FLLFSRFHGLPNFQLDLSSFPKT*MFSTSD
Trigger: GTCACTTGTTGAGAACATTCATGTTTTGGGAAAAGA...GCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGGCTCTAAAGAAACATaGTGCATAAACAATCTTCGA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLGSKET*CINNLR
Trigger: TCGAAGATTGTTTATGCATCATGTTTCTTTAGAGCC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp CTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGCGGATTCTGTATCTCTTaGCGTTCCTTAGTTGTGCGA +
Preference number: 4 (lower is better)
Translates to: LDLSLFLIIQHLPVIIQGGFCIS*RSLVVR
Trigger: TCGCACAACTAAGGAACGTCAAGAGATACAGAATCC...GCCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTAGACAGAAATTCTTaGCCAGGTGCGGTAAAATTT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLDRNS*PGAVKF
Trigger: AAATTTTACCGCACCTGGTCAAGAATTTCTGTCTAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTCAGAACAAGATGGCTaGAAGTCTGGATCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLSEQDG*KSGSKN
Trigger: ATTTTTAGATCCAGACTTTCAGCCATCTTGTTCTGA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GTTGTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTCAGAACAAGATGGCTaGAAGTCTGGATCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: VVTSLDKPCSFCSADSMASEQDG*KSGSKN
Trigger: ATTTTTAGATCCAGACTTTCAGCCATCTTGTTCTGA...GGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp CAAGTCTGTCATTCTGTCATCACGATGGTCATGTTTCCTGGAAATTTCAGTATCATTGTAACATTCGTCTaGCAAATAGACGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: QVCHSVITMVMFPGNFSIIVTFV*QIDERG
Trigger: GCCCCTTTCGTCTATTTGTCAGACGAATGTTACAAT...GATACTGAAATTTCCAGGAAACATGACCATCGTGATGACAGAATGACAGACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666593.1
CDS-3UTR TCA 90 bp GTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTGCAGCAATTAACATATaGGGCTTAATAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VGVDHLGSFACSICISLFAAINI*GLIMSS
Trigger: TGAGGACATTATTAAGCCTCATATGTTAATTGCTGC...AAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGCAGCAATTAACATATaGGGCTTAATAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLAAINI*GLIMSS
Trigger: TGAGGACATTATTAAGCCTCATATGTTAATTGCTGC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp GTTGTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCGCAGCAATTAACATATaGGGCTTAATAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VVTSLDKPCSFCSADSMAAAINI*GLIMSS
Trigger: TGAGGACATTATTAAGCCTCATATGTTAATTGCTGC...GGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAGCAGTGTACGGCCCTaGAGTACAGTCTTTAGTTGG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSSVRP*STVFSW
Trigger: CCAACTAAAGACTGTACTTCAGGGCCGTACACTGCT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AGGACTTTGATAATATATCTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTTCCTGTACCAGGAATaGTTTGAGCAGTGTACGGCC +
Preference number: 4 (lower is better)
Translates to: RTLIIYLTIRRRHQKLVSFLYQE*FEQCTA
Trigger: GGCCGTACACTGCTCAAATCATTCCTGGTACAGGAA...GGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAGATATATTATCAAAGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCCGATACACAAACGCTaGGGTAAATTTGAAACTAAT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLPIHKR*GKFETN
Trigger: ATTAGTTTCAAATTTACCTCAGCGTTTGTGTATCGG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp CTTCATAAAGCTCTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCCGATACACAAACGCTaGGGTAAATTTGAAACTAAT +
Preference number: 4 (lower is better)
Translates to: LHKALHHLAKHELAVLLVPIHKR*GKFETN
Trigger: ATTAGTTTCAAATTTACCTCAGCGTTTGTGTATCGG...CACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp CAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATATCTTCATATTCATCCTaGCTTTTGAACAGGATGGAA +
Preference number: 4 (lower is better)
Translates to: QSLVGVDHLGSFACSICISSYSS*LLNRME
Trigger: TTCCATCCTGTTCAAAAGTCAGGATGAATATGAAGA...TATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGAAGTTCCAGATATTaGCTGCTTTACTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLRSSRY*LLYCKN
Trigger: ATTCTTGCAGTAAAGCAGGCAATATCTGGAACTTCT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp CCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGCTTCAAATTGCTTGCTaGTGTCTACCTGACCAATCG +
Preference number: 4 (lower is better)
Translates to: PNFQLDLSLFLIIQHLPVLQIAC*CLPDQS
Trigger: CGATTGGTCAGGTAGACAGCAGCAAGCAATTTGAAG...CACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp GGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCAGTTTCACAGCTTTTTaGAGAGCTTCAGTAGAAACA +
Preference number: 4 (lower is better)
Translates to: GGPLGIICMQYMHKLVFCSFTAF*RASVET
Trigger: TGTTTCTACTGAAGCTCTGCAAAAAGCTGTGAAACT...GCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTATTGGATGTACCTCTaGAGAAGTTTCCTCACTAAT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLYWMYL*RSFLTN
Trigger: ATTAGTGAGGAAACTTCTGCAGAGGTACATCCAATA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp ATAAGGCTTCTAGTCTCTTTTGTTGGGCCTCCACATATTTTGCTGCTTCCTTTTTGCCTCGTAACAACCTaGCATAATTTTCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: IRLLVSFVGPPHILLLPFCLVTT*HNFRLA
Trigger: TGCCAAACGAAAATTATGGCAGGTTGTTACGAGGCA...AAAAGGAAGCAGCAAAATATGTGGAGGCCCAACAAAAGAGACTAGAAGCCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAAATTCTTGACCAGGTaGGGTAAAATTTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLKFLTR*GKIWIL
Trigger: CAGAATCCAAATTTTACCGCACCTGGTCAAGAATTT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTGTGGAAAGACGCGTTaGCTTTGTTTCTTCTTAATT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLCGKTR*LCFFLI
Trigger: AATTAAGAAGAAACAAAGGCAACGCGTCTTTCCACA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTTGCAAGATACAGACTaGCTGGCTGTGGAAAGACGC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYLQDTD*LAVERR
Trigger: GCGTCTTTCCACAGCCAGGCAGTCTGTATCTTGCAA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGTGCTGCATTCTTCACTaGTTCATAAAGCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: GLPNFQLDLSLFLIIQHLCCILH*FIKLCT
Trigger: GGTGCAGAGCTTTATGAAGCAGTGAAGAATGCAGCA...CAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp GGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGGTCGCCACTGGAGGTTaGTTGCAGCAATTAACATAT +
Preference number: 4 (lower is better)
Translates to: GLPNFQLDLSLFLIIQHLVATGG*LQQLTY
Trigger: ATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGAC...CAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGGCTCTTCTCTTTTTaGAGTTCTTTTGGTCATCAA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLRLFSF*SSFGHQ
Trigger: TTGATGACCAAAAGAACTGCAAAAAGAGAAGAGCCT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGACGATATTCCTCCAATaGTTGGTAAATAAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLTIFLQ*LVNKSV
Trigger: CACTGACTTATTTACCAAGCATTGGAGGAATATCGT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCTGTGTGGTGGTGGCTaGCCAGCTTCCATTATCAAT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYLCGGG*PASIIN
Trigger: ATTGATAATGGAAGCTGGCCAGCCACCACCACACAG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCATGTATTTTTCAGGTaGCAACAGCTCAACGTTTTT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLHVFFR*QQLNVF
Trigger: AAAAACGTTGAGCTGTTGCCACCTGAAAAATACATG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTACCTGACCAATCGATaGGGCATTCATTATGACATG +
Preference number: 4 (lower is better)
Translates to: DKPCSFCSADSMAFLISNYLTNR*GIHYDM
Trigger: CATGTCATAATGAATGCCCCATCGATTGGTCAGGTA...GTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCCCTCCTTCATAAACTaGCCAGATAATTTAAGACAT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLPSFIN*PDNLRH
Trigger: ATGTCTTAAATTATCTGGCCAGTTTATGAAGGAGGG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp ATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGGCTAACATTCTTCAATACTaGCTCAATACCAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: IWILVATGGCLQQLTYEANILQY*LNTRIK
Trigger: CTTGATTCTGGTATTGAGCCAGTATTGAAGAATGTT...AGCCTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTATCCTAAATGCAGGTaGCCCTACCTCAAAATTATT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLYPKCR*PYLKII
Trigger: AATAATTTTGAGGTAGGGCCACCTGCATTTAGGATA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTGAAGCATCTGATACCTaGACAGATTTTCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: SLDKPCSFCSADSMAFLIEASDT*TDFPLA
Trigger: AGCAAGTGGAAAATCTGTCCAGGTATCAGATGCTTC...AATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp ATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGATTGGAAAAGACTTGCTTaGTACTATCTTCTATTTCAG +
Preference number: 4 (lower is better)
Translates to: IWAETGVETDFLLAIQSDWKRLA*YYLLFQ
Trigger: CTGAAATAGAAGATAGTACCAAGCAAGTCTTTTCCA...ATCACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCAACAAGTGACACTTTaGTTCCTAATACCAACTGTT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLQQVTL*FLIPTV
Trigger: AACAGTTGGTATTAGGAACCAAAGTGTCACTTGTTG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCCAACAAGTGACACTTTaGTTCCTAATACCAACTGTT +
Preference number: 4 (lower is better)
Translates to: FLLFSRFHGLPNFQLDLSQQVTL*FLIPTV
Trigger: AACAGTTGGTATTAGGAACCAAAGTGTCACTTGTTG...GCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAACAAAGACTTTGGTTaGTCTGCCTGTAGTAATCAA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLNKDFG*SACSNQ
Trigger: TTGATTACTACAGGCAGACCAACCAAAGTCTTTGTT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp ATAAGGCTTCTAGTCTCTTTTGTTGGGCCTCCACATATTTTGCTGCTTCCTTTTTCTAGAAATAAGCTTTaGATCCACACCTGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: IRLLVSFVGPPHILLLPFSRNKL*IHTWSV
Trigger: GACACTCCAGGTGTGGATCCAAAGCTTATTTCTAGA...AAAAGGAAGCAGCAAAATATGTGGAGGCCCAACAAAAGAGACTAGAAGCCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATACCCTCAAGGTAAGCTaGGTCTGCTGCATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYTLKVS*VCCILH
Trigger: GTGAAGAATGCAGCAGACCCAGCTTACCTTGAGGGT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGTCAATGATTCTGGTCGCCACTaGAGGTTGCTTGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: CMQYMHKLVFCFIAKYVNDSGRH*RLLAAI
Trigger: AATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATC...ATTGACATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp ATTACATCAACACAACCAACATTTCCTCCATCACTGAAAAGCGATGATAAGGGCAAAGTGGCCCTCTTTTaGACTAGCAGAAAACACAGA +
Preference number: 4 (lower is better)
Translates to: ITSTQPTFPPSLKSDDKGKVALF*TSRKHR
Trigger: TCTGTGTTTTCTGCTAGTCCAAAAGAGGGCCACTTT...GCCCTTATCATCGCTTTTCAGTGATGGAGGAAATGTTGGTTGTGTTGATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp ACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGTGGGTGTTTCGTATTTaGTGCCACAACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TGSELVSYHSTFACDYSRWVFRI*CHNSLV
Trigger: CACCAAGGAGTTGTGGCACCAAATACGAAACACCCA...CCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTCTTCCGTACTGGCCTaGGAACTCTCCTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSSVLA*ELSCSL
Trigger: CAAAGAACAGGAGAGTTCCCAGGCCAGTACGGAAGA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCACATTCTTCCGTACTaGCCTGGGAACTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYHILPY*PGNSPV
Trigger: AACAGGAGAGTTCCCAGGCCAGTACGGAAGAATGTG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp ATAAGGCTTCTAGTCTCTTTTGTTGGGCCTCCACATATTTTGCTGCTTCCTTTTCTTGCAGCTTCTCTTTaGTTTGTGTTTTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: IRLLVSFVGPPHILLLPFLAASL*FVFSLS
Trigger: AGACAGTGAAAACACAAATCAAAGAGAAGCTGCAAG...AAAAGGAAGCAGCAAAATATGTGGAGGCCCAACAAAAGAGACTAGAAGCCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCCTGAAAGGGTTAGTTaGGACCATTCACAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYPERVS*DHSQAK
Trigger: TTTGGCCTGTGAATGGTCTCAACTAACCCTTTCAGG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp ATTACATCAACACAACCAACATTTCCTCCATCACTGAAAAGCGATGATAAGGGCCTTGATTTCCTTATTTaGAGCTGTTCTGAAGCTACC +
Preference number: 4 (lower is better)
Translates to: ITSTQPTFPPSLKSDDKGLDFLI*SCSEAT
Trigger: GGTAGCTTCAGAACAGCTTCAAATAAGGAAATCAAG...GCCCTTATCATCGCTTTTCAGTGATGGAGGAAATGTTGGTTGTGTTGATGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp CTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTAGATACAGTATTAATTaGCTGAGGCTTGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LAKHELAVLLVHVMVNMVRYSIN*LRLAQF
Trigger: AAACTGAGCAAGCCTCAGTCAATTAATACTGTATCT...AACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTGGAAGGTCACTAGTTaGTTTCCAGTACCAACTGGG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYWKVTS*FPVPTG
Trigger: CCCAGTTGGTACTGGAAATCAACTAGTGACCTTCCA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp CATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGCTGCCAGTTTCCATATaGTCCATCTATAGTGATTAT +
Preference number: 4 (lower is better)
Translates to: HLAKHELAVLLVHVMVNMLPVSI*SIYSDY
Trigger: ATAATCACTATAGATGGATCATATGGAAACTGGCAG...CATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp TGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGTCAATGATCTAAAAATTTGCTaGAGTGAAGGGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: CMQYMHKLVFCFIAKYVNDLKIC*SEGAPV
Trigger: CACGGGAGCCCCTTCACTTCAGCAAATTTTTAGATC...ATTGACATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp TTGCCAGTAAATTGTAACATTCGTCTGACAAATAGACGAAAGGGGCAAGTCCTGGCAGCAATTAACATATaGGGCTTAATAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LPVNCNIRLTNRRKGQVLAAINI*GLIMSS
Trigger: TGAGGACATTATTAAGCCTCATATGTTAATTGCTGC...CAGGACTTGCCCCTTTCGTCTATTTGTCAGACGAATGTTACAATTTACTGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp GTCTGTCATTCTGTCATCACGATGGTCATGTTTCCTGGAAATTTCAGTATCCTCGCAGCAATTAACATATaGGGCTTAATAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VCHSVITMVMFPGNFSILAAINI*GLIMSS
Trigger: TGAGGACATTATTAAGCCTCATATGTTAATTGCTGC...GAGGATACTGAAATTTCCAGGAAACATGACCATCGTGATGACAGAATGACAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666593.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTCTGAGATAATCTTCTaGACTGGTGGGAGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSEIIF*TGGSSP
Trigger: AGGACTGCTCCCACCAGTTCAGAAGATTATCTCAGA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp ACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGCAGTTCTCACAAGATCTaGTGGCTTAAAAGTGAGAGT +
Preference number: 4 (lower is better)
Translates to: TIRRRHQKLVSCTRNDLSSSHKI*WLKSES
Trigger: ACTCTCACTTTTAAGCCATCAGATCTTGTGAGAACT...GCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665585.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTCACATGAAGAAATATaGAATAGGGGTATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLSHEEI*NRGIFS
Trigger: GGAGAAAATACCCCTATTGCATATTTCTTCATGTGA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTTGTTGTTCCAGATATTGCCTaGTTTACTGCAAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: KARTCCLVSARDGKYGFVVPDIA*FTARMQ
Trigger: CTGCATTCTTGCAGTAAAGCAGGCAATATCTGGAAC...AACAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp CCAGACAAAAGAGCTTGGGTATTTATCAATGCAAGTTCTTCGTCAGCTATTGAATACCTTCAAATTGCTTaGTGCTGTCTACCTGACCAA +
Preference number: 4 (lower is better)
Translates to: PDKRAWVFINASSSSAIEYLQIA*CCLPDQ
Trigger: TTGGTCAGGTAGACAGCAGCAAGCAATTTGAAGGTA...TTCAATAGCTGACGAAGAACTTGCATTGATAAATACCCAAGCTCTTTTGTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp GCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTTGTATTGGATGTACCTCTaGAGAAGTTTCCTCACTAAT +
Preference number: 4 (lower is better)
Translates to: AKHELAVLLVHVMVNMVLYWMYL*RSFLTN
Trigger: ATTAGTGAGGAAACTTCTGCAGAGGTACATCCAATA...CAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGATTTGTGTAACAAGTTaGAGGACTTTTTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLICVTS*RTFCCF
Trigger: GAAACAGCAAAAAGTCCTGCAACTTGTTACACAAAT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATACTGGCTATCCTAAATaGAGGTGGCCCTACCTCAAA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYTGYPK*RWPYLK
Trigger: TTTGAGGTAGGGCCACCTGCATTTAGGATAGCCAGT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCCTTATGTGAATGCGTaGTACATTCATCATTATCTA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLPYVNA*YIHHYL
Trigger: TAGATAATGATGAATGTAGCACGCATTCACATAAGG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp CAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATACCTTATGTGAATGCGTaGTACATTCATCATTATCTA +
Preference number: 4 (lower is better)
Translates to: QSLVGVDHLGSFACSICIPYVNA*YIHHYL
Trigger: TAGATAATGATGAATGTAGCACGCATTCACATAAGG...TATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTCTAAAATGGAAACTTaGTTTCCACTTGCTGTACTA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLSKMET*FPLAVL
Trigger: TAGTACAGCAAGTGGAAAGCAAGTTTCCATTTTAGA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTAAAATGGAAACTTaGTTTCCACTTGCTGTACTA +
Preference number: 4 (lower is better)
Translates to: VGVDHLGSFACSICISLFSKMET*FPLAVL
Trigger: TAGTACAGCAAGTGGAAAGCAAGTTTCCATTTTAGA...AAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp GGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCCACTTTTTGGGTATCTaGACTACTAGTTTTATTGCT +
Preference number: 4 (lower is better)
Translates to: GGPLGIICMQYMHKLVFCHFLGI*TTSFIA
Trigger: AGCAATAAAACTAGTAGTGCAGATACCCAAAAAGTG...GCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAAGGTAAGCTGGGTCTaGTGCATTCTTCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYKVSWV*CILHCF
Trigger: GAAGCAGTGAAGAATGCAGCAGACCCAGCTTACCTT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTTGCATGCAGTATATaGATAAGCTTGTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GGPLGIICMQYMHKLVFCFACSI*ISLFSA
Trigger: AGCAGAAAACAAGCTTATGCATATACTGCATGCAAA...GCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp ACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATAGGCTCTTCTCTTTTTaGAGTTCTTTTGGTCATCAA +
Preference number: 4 (lower is better)
Translates to: TLFLLFSRFHGLPNFQLDRLFSF*SSFGHQ
Trigger: TTGATGACCAAAAGAACTGCAAAAAGAGAAGAGCCT...ATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTCTTTTACAGGAGATTaGTACAGCGGCAGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSFTGD*YSGRVS
Trigger: GCTGACTCTGCCGCTGTACCAATCTCCTGTAAAAGA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGATTGACTTTCCAATGTaGTCTTTGCAGCTATTTACT +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLIDFPM*SLQLFT
Trigger: AGTAAATAGCTGCAAAGACCACATTGGAAAGTCAAT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTGGATCAGTATCATTTaGTTCCACTTCAGATACAAA +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLWISII*FHFRYK
Trigger: TTTGTATCTGAAGTGGAACCAAATGATACTGATCCA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAATTCTGTGTGGTGGTaGCTGGCCAGCTTCCATTAT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYNSVWW*LASFHY
Trigger: ATAATGGAAGCTGGCCAGCCACCACCACACAGAATT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGATTTGCAAATGTAAGTaGTGCTTCAAAAGCATTTGC +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLICKCK*CFKSIC
Trigger: GCAAATGCTTTTGAAGCACCACTTACATTTGCAAAT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp GCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTTGATTTCCAGTACCAACTaGGACACTTTCTTTCAGTAT +
Preference number: 4 (lower is better)
Translates to: AKHELAVLLVHVMVNMVLISSTN*DTFFQY
Trigger: ATACTGAAAGAAAGTGTCCCAGTTGGTACTGGAAAT...CAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAACATTCTTCAATACTaGCTCAATACCAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLNILQY*LNTRIK
Trigger: CTTGATTCTGGTATTGAGCCAGTATTGAAGAATGTT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGAAAGAATCCAAGTTTaGTATACCAGCGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYERIQV*YTSEQA
Trigger: GGCCTGCTCGCTGGTATACCAAACTTGGATTCTTTC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAGTACAGTCTTTAGTTaGGGTGGACCACTTGGGATC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSTVFS*GGPLGI
Trigger: GATCCCAAGTGGTCCACCCCAACTAAAGACTGTACT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGACTTTGAAGTCATCTaGGCTGAGACAGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYDFEVI*AETGVE
Trigger: TTCCACACCTGTCTCAGCCCAGATGACTTCAAAGTC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGGACTTTGAAGTCATCTaGGCTGAGACAGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SFACSICISLFSASLQSMDFEVI*AETGVE
Trigger: TTCCACACCTGTCTCAGCCCAGATGACTTCAAAGTC...CATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470094.1
ENST00000614259.2
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAATGCAAAAATTAGCTaGGCATGGTGGTGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYNAKIS*AWWCVP
Trigger: AGGGACGCACCACCATGCCCAGCTAATTTTTGCATT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGTCAATAATGCAAAAATTAGCTaGGCATGGTGGTGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: CMQYMHKLVFCFIAKYVNNAKIS*AWWCVP
Trigger: AGGGACGCACCACCATGCCCAGCTAATTTTTGCATT...ATTGACATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATACTCCCACATACCACTaGCTTATCTCTTTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYTPTYH*LISLWC
Trigger: ACACCACAAAGAGATAAGTCAGTGGTATGTGGGAGT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGGAGTCCTCCTTCTGTaGGCAAACAGTATGTATTTC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYGVLLL*ANSMYF
Trigger: GAAATACATACTGTTTGCTCACAGAAGGAGGACTCC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTTCCCGCTAGCTGTATaGAAACCCAATAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYFPLAV*KPNRVG
Trigger: ACCTACTCTATTGGGTTTTCATACAGCTAGCGGGAA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTTGTTAGCAAAAACCTTATGTaGATGCGTGCTACATTCATC +
Preference number: 4 (lower is better)
Translates to: KARTCCLVSARDGKYGFVSKNLM*MRATFI
Trigger: GATGAATGTAGCACGCATTCACATAAGGTTTTTGCT...AACAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGGATTCTGTATCTCTTaGCGTTCCTTAGTTGTGCGA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYGFCIS*RSLVVR
Trigger: TCGCACAACTAAGGAACGTCAAGAGATACAGAATCC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGTATACAGCTGTTTATaGGAACACGCAGAGGGAACT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYVYSCL*EHAEGT
Trigger: AGTTCCCTCTGCGTGTTCTCATAAACAGCTGTATAC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCATTTCCTCCATCACTaGAAAGCGATGATAAGGGCA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYHFLHH*KAMIRA
Trigger: TGCCCTTATCATCGCTTTTCAGTGATGGAGGAAATG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp AATATGGTTTTGTTGTGTTTTCAGAAGTTGATTCCAACCCTCATGGATGACTTTCATTTCCTCCATCACTaGAAAGCGATGATAAGGGCA +
Preference number: 4 (lower is better)
Translates to: NMVLLCFQKLIPTLMDDFHFLHH*KAMIRA
Trigger: TGCCCTTATCATCGCTTTTCAGTGATGGAGGAAATG...AAAGTCATCCATGAGGGTTGGAATCAACTTCTGAAAACACAACAAAACCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665585.1
CDS-3UTR TCA 90 bp AATATGGTTTTGTTGTGTTTTCAGAAGTTGATTCCAACCCTCATGGATGACTTTACTTCCACACGGTTGTaGCATCCCTTGATAAACCTT +
Preference number: 4 (lower is better)
Translates to: NMVLLCFQKLIPTLMDDFTSTRL*HPLINL
Trigger: AAGGTTTATCAAGGGATGTCACAACCGTGTGGAAGT...AAAGTCATCCATGAGGGTTGGAATCAACTTCTGAAAACACAACAAAACCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665585.1
CDS-3UTR TCA 90 bp ACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGCTCAGAACAAGATGGCTaGAAGTCTGGATCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: TIRRRHQKLVSCTRNDLSSEQDG*KSGSKN
Trigger: ATTTTTAGATCCAGACTTTCAGCCATCTTGTTCTGA...GCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGAAGATCAGCATCTCTaGATTCCTCAGAAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYEDQHL*IPQKWS
Trigger: AGACCACTTCTGAGGAATGCAGAGATGCTGATCTTC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCTTCAAATTGCTTGCTaGTGTCTACCTGACCAATCG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYLQIAC*CLPDQS
Trigger: CGATTGGTCAGGTAGACAGCAGCAAGCAATTTGAAG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTTGTTAGTATTACCATGACATaGTTCTTGAGCTTTCGCAAC +
Preference number: 4 (lower is better)
Translates to: KARTCCLVSARDGKYGFVSITMT*FLSFRN
Trigger: GTTGCGAAAGCTCAAGAAGCATGTCATGGTAATACT...AACAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp ACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATATTTGTGTAACAAGTTaGAGGACTTTTTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TLFLLFSRFHGLPNFQLDICVTS*RTFCCF
Trigger: GAAACAGCAAAAAGTCCTGCAACTTGTTACACAAAT...ATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCAGAGTGGATGTTTTTaGAAGATACAGACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYQSGCF*KIQTAW
Trigger: CCAGGCAGTCTGTATCTTGCAAAAACATCCACTCTG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AATAATGGCCACTTTTTGGGTATCTGCACTACTAGTTTTATTGCTAGAAGTTTCCAGAGTGGATGTTTTTaGAAGATACAGACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: NNGHFLGICTTSFIARSFQSGCF*KIQTAW
Trigger: CCAGGCAGTCTGTATCTTGCAAAAACATCCACTCTG...GAAACTTCTAGCAATAAAACTAGTAGTGCAGATACCCAAAAAGTGGCCATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGGCACATTCCATAGCTaGCAGTTTCCATATGATCCA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYGTFHS*QFPYDP
Trigger: TGGATCATATGGAAACTGGCAGCTATGGAATGTGCC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTGATAATATATCTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCTGCAAAGCACGAACTTaGTGTCTTGTTAGTGCACGT +
Preference number: 4 (lower is better)
Translates to: LIIYLTIRRRHQKLVSCTCKART*CLVSAR
Trigger: ACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCA...GGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAGATATATTATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTGCTTCATAAAGCTCTaGACCATCTTGCAAAGCACG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYCFIKL*TILQST
Trigger: CGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAGCA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTGATAATATATCTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCTGCTTCATAAAGCTCTaGACCATCTTGCAAAGCACG +
Preference number: 4 (lower is better)
Translates to: LIIYLTIRRRHQKLVSCTCFIKL*TILQST
Trigger: CGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAGCA...GGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAGATATATTATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp TGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGTCAATTGCTGCATTCTTCACTaGTTCATAAAGCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: CMQYMHKLVFCFIAKYVNCCILH*FIKLCT
Trigger: GGTGCAGAGCTTTATGAAGCAGTGAAGAATGCAGCA...ATTGACATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTGCTGCATTCTTCACTaGTTCATAAAGCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYCCILH*FIKLCT
Trigger: GGTGCAGAGCTTTATGAAGCAGTGAAGAATGCAGCA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGTAAGCTGGGTCTGCTaGATTCTTCACTGCTTCATA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYVSWVC*ILHCFI
Trigger: TATGAAGCAGTGAAGAATGCAGCAGACCCAGCTTAC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGTCGCCACTGGAGGTTaGTTGCAGCAATTAACATAT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYVATGG*LQQLTY
Trigger: ATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGAC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AATATGGTTTTGTTGTGTTTTCAGAAGTTGATTCCAACCCTCATGGATGACTTTCTGTACTCTCTTTCCTaGCACCTTGTGAAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: NMVLLCFQKLIPTLMDDFLYSLS*HLVKKV
Trigger: TACCTTCTTCACAAGGTGGCAGGAAAGAGAGTACAG...AAAGTCATCCATGAGGGTTGGAATCAACTTCTGAAAACACAACAAAACCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665585.1
CDS-3UTR CCA 90 bp GGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGTTCAGAAATATGTTTTaGTGTCTGACGACCCTTCAC +
Preference number: 4 (lower is better)
Translates to: GLPNFQLDLSLFLIIQHLFRNMF*CLTTLH
Trigger: GTGAAGGGTCGTCAGACACCAAAACATATTTCTGAA...CAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp TTGCCAGTAAATTGTAACATTCGTCTGACAAATAGACGAAAGGGGCAAGTCCTGATTGACTTTCCAATGTaGTCTTTGCAGCTATTTACT +
Preference number: 4 (lower is better)
Translates to: LPVNCNIRLTNRRKGQVLIDFPM*SLQLFT
Trigger: AGTAAATAGCTGCAAAGACCACATTGGAAAGTCAAT...CAGGACTTGCCCCTTTCGTCTATTTGTCAGACGAATGTTACAATTTACTGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp CTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGCCCTCCTTCATAAACTaGCCAGATAATTTAAGACAT +
Preference number: 4 (lower is better)
Translates to: LTIRRRHQKLVSCTRNDLPSFIN*PDNLRH
Trigger: ATGTCTTAAATTATCTGGCCAGTTTATGAAGGAGGG...CAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp AAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTTGTTAGATTCGAGGCAGAGTaGATGTTTTTGCAAGATACA +
Preference number: 4 (lower is better)
Translates to: KARTCCLVSARDGKYGFVRFEAE*MFLQDT
Trigger: TGTATCTTGCAAAAACATCCACTCTGCCTCGAATCT...AACAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp ACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGTCTAGAAATAAGCTTTaGATCCACACCTGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: TGSELVSYHSTFACDYSRSRNKL*IHTWSV
Trigger: GACACTCCAGGTGTGGATCCAAAGCTTATTTCTAGA...CCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp TCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGAGAATGCAGTCTGTATaGGATTCAAGATGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SFACSICISLFSASLQSMRMQSV*DSRCCS
Trigger: AGAGCAGCATCTTGAATCTCATACAGACTGCATTCT...CATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTTTGATACCCTGAAATaGAGAAGCCACTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYFDTLK*RSHWRS
Trigger: ACTTCTCCAGTGGCTTCTTCATTTCAGGGTATCAAA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp CCAGACAAAAGAGCTTGGGTATTTATCAATGCAAGTTCTTCGTCAGCTATTGAATTCAGAATCATTCTGTaGACAGCTTCTTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: PDKRAWVFINASSSSAIEFRIIL*TASFHR
Trigger: TCTGTGAAAAGAAGCTGTTCACAGAATGATTCTGAA...TTCAATAGCTGACGAAGAACTTGCATTGATAAATACCCAAGCTCTTTTGTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATATGGGGCATTCATTATaGCATGAAGATCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYMGHSL*HEDQHL
Trigger: GAGATGCTGATCTTCATGTCATAATGAATGCCCCAT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTTGTCTAGACGTAGGTaGATAGTGAAGACTATGCTC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYLSRRR*IVKTML
Trigger: GAGCATAGTCTTCACTATTCACCTACGTCTAGACAA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp CCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGTTAGACAGAAATTCTTaGCCAGGTGCGGTAAAATTT +
Preference number: 4 (lower is better)
Translates to: PNFQLDLSLFLIIQHLPVLDRNS*PGAVKF
Trigger: AAATTTTACCGCACCTGGTCAAGAATTTCTGTCTAA...CACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp CCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGTTCAACATTTGCCTGTaGTTATTCAAGGCTCTTAAC +
Preference number: 4 (lower is better)
Translates to: PNFQLDLSLFLIIQHLPVFNICL*LFKALN
Trigger: GTTAAGAGCCTTGAATAATCACAGGCAAATGTTGAA...CACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATATTGTAACATTCGTCTaGCAAATAGACGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYIVTFV*QIDERG
Trigger: GCCCCTTTCGTCTATTTGTCAGACGAATGTTACAAT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGTCAATTTGTTGAATGTCTCTTaGAAGTGGCCCTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: CMQYMHKLVFCFIAKYVNLLNVS*KWPSFG
Trigger: TCCAAAAGAGGGCCACTTTCAAGAGACATTCAACAA...ATTGACATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTTGTTGAATGTCTCTTaGAAGTGGCCCTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYLLNVS*KWPSFG
Trigger: TCCAAAAGAGGGCCACTTTCAAGAGACATTCAACAA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAACGTCGTTTCAGTCTaGGATAATCTTCTGAACTGG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYNVVSV*DNLLNW
Trigger: CCAGTTCAGAAGATTATCTCAGACTGAAACGACGTT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGGCAGAGTCAGCCCTTaGTCTTTGAATATTATTGGA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYGRVSP*SLNIIG
Trigger: TCCAATAATATTCAAAGAGCAAGGGCTGACTCTGCC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGTTCCAGATATTGCCTaGTTTACTGCAAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYVPDIA*FTARMQ
Trigger: CTGCATTCTTGCAGTAAAGCAGGCAATATCTGGAAC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTGCCTCGTAACAACCTaGCATAATTTTCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYCLVTT*HNFRLA
Trigger: TGCCAAACGAAAATTATGGCAGGTTGTTACGAGGCA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp CCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGAAATTCTTGACCAGGTaGGGTAAAATTTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: PNFQLDLSLFLIIQHLPVKFLTR*GKIWIL
Trigger: CAGAATCCAAATTTTACCGCACCTGGTCAAGAATTT...CACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGAGAACAAGTGTTTTTaGAGCTGTGTCATCCCTTTC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYENKCF*SCVIPF
Trigger: GAAAGGGATGACACAGCTGCAAAAACACTTGTTCTC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AATAATGGCCACTTTTTGGGTATCTGCACTACTAGTTTTATTGCTAGAAGTTTCGAGAACAAGTGTTTTTaGAGCTGTGTCATCCCTTTC +
Preference number: 4 (lower is better)
Translates to: NNGHFLGICTTSFIARSFENKCF*SCVIPF
Trigger: GAAAGGGATGACACAGCTGCAAAAACACTTGTTCTC...GAAACTTCTAGCAATAAAACTAGTAGTGCAGATACCCAAAAAGTGGCCATTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGACCAACTGTCAGTCTaGCATTCTTTAAGACAGCTA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYDQLSV*HSLRQL
Trigger: TAGCTGTCTTAAAGAATGGCAGACTGACAGTTGGTC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp CAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAAGAGCCCACCAGTTCTaGTCCATGAAGAATAATCTT +
Preference number: 4 (lower is better)
Translates to: QLDLSLFLIIQHLPVIIQRAHQF*SMKNNL
Trigger: AAGATTATTCTTCATGGAGCAGAACTGGTGGGCTCT...TTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAGAGCCCACCAGTTCTaGTCCATGAAGAATAATCTT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYRAHQF*SMKNNL
Trigger: AAGATTATTCTTCATGGAGCAGAACTGGTGGGCTCT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp ACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGCCCACTGTATAGGGTATaGTCTTTGAATAATTACATC +
Preference number: 4 (lower is better)
Translates to: TIRRRHQKLVSCTRNDLSPLYRV*SLNNYI
Trigger: GATGTAATTATTCAAAGAGCATACCCTATACAGTGG...GCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp GACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCACCACTGTATAGGGTATaGTCTTTGAATAATTACATC +
Preference number: 4 (lower is better)
Translates to: DHLGSFACSICISLFSASPLYRV*SLNNYI
Trigger: GATGTAATTATTCAAAGAGCATACCCTATACAGTGG...TGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATACGGTACAACTTCCTTaGAGATTTTGTCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYTVQLP*RFCHFH
Trigger: GTGGAAGTGACAAAATCTCCAAGGAAGTTGTACCGT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGGGTATTTTCTCCATCTaGGCTCCATTTAGACCTGAA +
Preference number: 4 (lower is better)
Translates to: SFACSICISLFSASLQSMGIFSI*APFRPE
Trigger: TTCAGGTCTAAATGGAGCCCAGATGGAGAAAATACC...CATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTACCTGACCAATCGATaGGGCATTCATTATGACATG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYYLTNR*GIHYDM
Trigger: CATGTCATAATGAATGCCCCATCGATTGGTCAGGTA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGAAGCATCTGATACCTaGACAGATTTTCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYEASDT*TDFPLA
Trigger: AGCAAGTGGAAAATCTGTCCAGGTATCAGATGCTTC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGTTTACACAGTGCTCTaGGTTTCTCTTATCAACACG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYVYTVL*VSLINT
Trigger: CGTGTTGATAAGAGAAACCCAGAGCACTGTGTAAAC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTCTAGAAATAAGCTTTaGATCCACACCTGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSRNKL*IHTWSV
Trigger: GACACTCCAGGTGTGGATCCAAAGCTTATTTCTAGA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAAAGTGGCCCTCTTTTaGACTAGCAGAAAACACAGA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYKVALF*TSRKHR
Trigger: TCTGTGTTTTCTGCTAGTCCAAAAGAGGGCCACTTT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
3UTR CAA 72 bp ATACCACCCATCTGTAAGTTCAATAATGGCCACTTTTaGGGTATCTGCACTACTAGTTTTATTGCTAGAAGT +
Preference number: 4 (lower is better)
Translates to: IPPICKFNNGHF*GICTTSFIARS
Trigger: ACTTCTAGCAATAAAACTAGTAGTGCAGATACCCAAAAAGTGGCCATTATTGAACTTACAGATGGGTGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTCAGCCCTTGCTCTTTaGATATTATTGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSALAL*ILLELK
Trigger: CTTCAACTCCAATAATATTCAAAGAGCAAGGGCTGA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATACAAACTTTGGTGTATaGAACAAACTCCCACATACC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYTNFGV*NKLPHT
Trigger: GGTATGTGGGAGTTTGTTTCATACACCAAAGTTTGT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGACAAACTTTGGTGTATaGAACAAACTCCCACATACC +
Preference number: 4 (lower is better)
Translates to: SFACSICISLFSASLQSMTNFGV*NKLPHT
Trigger: GGTATGTGGGAGTTTGTTTCATACACCAAAGTTTGT...CATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATATATGTTTTGGTGTCTaGCGACCCTTCACAAACTTT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYICFGV*RPFTNF
Trigger: AAAGTTTGTGAAGGGTCGTCAGACACCAAAACATAT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCTCTCAAAGGGCTTCTaGTTTGCTACATTTGAATCT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYLSKGF*FATFES
Trigger: AGATTCAAATGTAGCAAATCAGAAGCCCTTTGAGAG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCTTGATTTCCTTATTTaGAGCTGTTCTGAAGCTACC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYLDFLI*SCSEAT
Trigger: GGTAGCTTCAGAACAGCTTCAAATAAGGAAATCAAG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTTTATTTTTGCAGGGTaGAGAGCTAGTCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYFIFAG*RASHKF
Trigger: GAACTTGTGACTAGCTCTTCACCCTGCAAAAATAAA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATATGAAGAATATCCTCTaGATCATCCAATGCCTCGTA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYMKNIL*IIQCLV
Trigger: TACGAGGCATTGGATGATTCAGAGGATATTCTTCAT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAGCAAAAACCTTATGTaGATGCGTGCTACATTCATC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSKNLM*MRATFI
Trigger: GATGAATGTAGCACGCATTCACATAAGGTTTTTGCT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGATGAGACTGACTTATaGAGCTTCCCTATACTACAT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYDETDL*SFPILH
Trigger: ATGTAGTATAGGGAAGCTTCATAAGTCAGTCTCATC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTATTTTCTTCTCTTGTaGGCTGGTCTGAATGTTCGT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYYFLLL*AGLNVR
Trigger: ACGAACATTCAGACCAGCTCACAAGAGAAGAAAATA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTATCTGTATTTTAGTTaGAGAAGCACCCTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYYLYFS*RSTLSG
Trigger: CCCAGAAAGGGTGCTTCTTCAACTAAAATACAGATA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp ACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGTCAGAACAAGATGGCTaGAAGTCTGGATCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: TGSELVSYHSTFACDYSRSEQDG*KSGSKN
Trigger: ATTTTTAGATCCAGACTTTCAGCCATCTTGTTCTGA...CCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR TCA 90 bp TCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGATTCATCCTGACTTTTaGACAGGATGGAACTATAGC +
Preference number: 4 (lower is better)
Translates to: SFACSICISLFSASLQSMIHPDF*TGWNYS
Trigger: GCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAAT...CATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATATTCATCCTGACTTTTaGACAGGATGGAACTATAGC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYIHPDF*TGWNYS
Trigger: GCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAAT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp ACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGAGAAGTTCCAGATATTaGCTGCTTTACTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: TGSELVSYHSTFACDYSRRSSRY*LLYCKN
Trigger: ATTCTTGCAGTAAAGCAGGCAATATCTGGAACTTCT...CCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAGTATTACCATGACATaGTTCTTGAGCTTTCGCAAC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSITMT*FLSFRN
Trigger: GTTGCGAAAGCTCAAGAAGCATGTCATGGTAATACT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTCTGAGTTTACACAGTaGTCTGGGTTTCTCTTATCA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSEFTQ*SGFLLS
Trigger: TGATAAGAGAAACCCAGAGCACTGTGTAAACTCAGA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp GGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGTTTGCATGCAGTATATaGATAAGCTTGTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GLPNFQLDLSLFLIIQHLFACSI*ISLFSA
Trigger: AGCAGAAAACAAGCTTATGCATATACTGCATGCAAA...CAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATACCCTTCACAAACTTTaGTGTATGAAACAAACTCCC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYTLHKL*CMKQTP
Trigger: GGGAGTTTGTTTCATACACCAAAGTTTGTGAAGGGT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCATTTCTTTACACTTTaGGGCAGCTGTGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYHFFTL*GSCDLN
Trigger: ATTGAGATCACAGCTGCCCCAAAGTGTAAAGAAATG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTCTTCTCTTGTGAGCTaGTCTGAATGTTCGTTACTT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSSLVS*SECSLL
Trigger: AAGTAACGAACATTCAGACCAGCTCACAAGAGAAGA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAGGTGCGGTAAAATTTaGATTCTGTATCTCTTGACG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYRCGKI*ILYLLT
Trigger: CGTCAAGAGATACAGAATCCAAATTTTACCGCACCT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAGATTCGAGGCAGAGTaGATGTTTTTGCAAGATACA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYRFEAE*MFLQDT
Trigger: TGTATCTTGCAAAAACATCCACTCTGCCTCGAATCT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTTCAGAATCATTCTGTaGACAGCTTCTTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYFRIIL*TASFHR
Trigger: TCTGTGAAAAGAAGCTGTTCACAGAATGATTCTGAA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTATGTTCAGAGAGCTTaGTTTCCTTATTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYYVQRA*FPYLKL
Trigger: CAGCTTCAAATAAGGAAATCAAGCTCTCTGAACATA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAGATACAGTATTAATTaGCTGAGGCTTGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYRYSIN*LRLAQF
Trigger: AAACTGAGCAAGCCTCAGTCAATTAATACTGTATCT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTCTTTTCCCAAAACATaGATGTTCTCAACAAGTGAC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSFPKT*MFSTSD
Trigger: GTCACTTGTTGAGAACATTCATGTTTTGGGAAAAGA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGTCAATGGCTCTAAAGAAACATaGTGCATAAACAATCTTCGA +
Preference number: 4 (lower is better)
Translates to: CMQYMHKLVFCFIAKYVNGSKET*CINNLR
Trigger: TCGAAGATTGTTTATGCATCATGTTTCTTTAGAGCC...ATTGACATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCTGCCAGTTTCCATATaGTCCATCTATAGTGATTAT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYLPVSI*SIYSDY
Trigger: ATAATCACTATAGATGGATCATATGGAAACTGGCAG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTTCAACATTTGCCTGTaGTTATTCAAGGCTCTTAAC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYFNICL*LFKALN
Trigger: GTTAAGAGCCTTGAATAATCACAGGCAAATGTTGAA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTCAGAACAAGATGGCTaGAAGTCTGGATCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSEQDG*KSGSKN
Trigger: ATTTTTAGATCCAGACTTTCAGCCATCTTGTTCTGA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGCAGCAATTAACATATaGGGCTTAATAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYAAINI*GLIMSS
Trigger: TGAGGACATTATTAAGCCTCATATGTTAATTGCTGC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR TCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTCTTCATATTCATCCTaGCTTTTGAACAGGATGGAA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSSYSS*LLNRME
Trigger: TTCCATCCTGTTCAAAAGTCAGGATGAATATGAAGA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGATGTTCAGATTCTTCTaGAGGTTCAGAATTATAGGG +
Preference number: 4 (lower is better)
Translates to: SFACSICISLFSASLQSMMFRFF*RFRIIG
Trigger: CCCTATAATTCTGAACCTGCAGAAGAATCTGAACAT...CATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATATGTTCAGATTCTTCTaGAGGTTCAGAATTATAGGG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYMFRFF*RFRIIG
Trigger: CCCTATAATTCTGAACCTGCAGAAGAATCTGAACAT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGCTTTACTGCAAGAATaGAGTCTGTATGAGATTCAA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYALLQE*SLYEIQ
Trigger: TTGAATCTCATACAGACTGCATTCTTGCAGTAAAGC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAGTTTCACAGCTTTTTaGAGAGCTTCAGTAGAAACA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYSFTAF*RASVET
Trigger: TGTTTCTACTGAAGCTCTGCAAAAAGCTGTGAAACT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTTCGATCTTTTATTGTaGCATCTGGAGTGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYFDLLL*HLECFL
Trigger: CAAAAAGCACTCCAGATGGCACAATAAAAGATCGAA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAGGCTCTTCTCTTTTTaGAGTTCTTTTGGTCATCAA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYRLFSF*SSFGHQ
Trigger: TTGATGACCAAAAGAACTGCAAAAAGAGAAGAGCCT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCATGTATTTTTCAGGTaGCAACAGCTCAACGTTTTT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYHVFFR*QQLNVF
Trigger: AAAAACGTTGAGCTGTTGCCACCTGAAAAATACATG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AGGACTTTGATAATATATCTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCCATGTATTTTTCAGGTaGCAACAGCTCAACGTTTTT +
Preference number: 4 (lower is better)
Translates to: RTLIIYLTIRRRHQKLVSHVFFR*QQLNVF
Trigger: AAAAACGTTGAGCTGTTGCCACCTGAAAAATACATG...GGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAGATATATTATCAAAGTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATATTTCCAGTACCAACTaGGACACTTTCTTTCAGTAT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYISSTN*DTFFQY
Trigger: ATACTGAAAGAAAGTGTCCCAGTTGGTACTGGAAAT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGTATCCTAAATGCAGGTaGCCCTACCTCAAAATTATT +
Preference number: 4 (lower is better)
Translates to: SFACSICISLFSASLQSMYPKCR*PYLKII
Trigger: AATAATTTTGAGGTAGGGCCACCTGCATTTAGGATA...CATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCAACAAGTGACACTTTaGTTCCTAATACCAACTGTT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYQQVTL*FLIPTV
Trigger: AACAGTTGGTATTAGGAACCAAAGTGTCACTTGTTG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAACAAAGACTTTGGTTaGTCTGCCTGTAGTAATCAA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYNKDFG*SACSNQ
Trigger: TTGATTACTACAGGCAGACCAACCAAAGTCTTTGTT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATATAATGGCCACTTTTTaGGTATCTGCACTACTAGTT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYIMATF*VSALLV
Trigger: AACTAGTAGTGCAGATACCCAAAAAGTGGCCATTAT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTGATAATATATCTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCATAATGGCCACTTTTTaGGTATCTGCACTACTAGTT +
Preference number: 4 (lower is better)
Translates to: LIIYLTIRRRHQKLVSCTIMATF*VSALLV
Trigger: AACTAGTAGTGCAGATACCCAAAAAGTGGCCATTAT...GGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAGATATATTATCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CCA 90 bp TCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGATAATGGCCACTTTTTaGGTATCTGCACTACTAGTT +
Preference number: 4 (lower is better)
Translates to: SFACSICISLFSASLQSMIMATF*VSALLV
Trigger: AACTAGTAGTGCAGATACCCAAAAAGTGGCCATTAT...CATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp AGGACTTTGATAATATATCTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTCACATGAAGAAATATaGAATAGGGGTATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RTLIIYLTIRRRHQKLVSSHEEI*NRGIFS
Trigger: GGAGAAAATACCCCTATTGCATATTTCTTCATGTGA...GGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAGATATATTATCAAAGTCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCCTTATGTGAATGCGTaGTACATTCATCATTATCTA +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYPYVNA*YIHHYL
Trigger: TAGATAATGATGAATGTAGCACGCATTCACATAAGG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCACTTTTTGGGTATCTaGACTACTAGTTTTATTGCT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYHFLGI*TTSFIA
Trigger: AGCAATAAAACTAGTAGTGCAGATACCCAAAAAGTG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp AATAATGGCCACTTTTTGGGTATCTGCACTACTAGTTTTATTGCTAGAAGTTTCCACTTTTTGGGTATCTaGACTACTAGTTTTATTGCT +
Preference number: 4 (lower is better)
Translates to: NNGHFLGICTTSFIARSFHFLGI*TTSFIA
Trigger: AGCAATAAAACTAGTAGTGCAGATACCCAAAAAGTG...GAAACTTCTAGCAATAAAACTAGTAGTGCAGATACCCAAAAAGTGGCCATTATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCCACTGTATAGGGTATaGTCTTTGAATAATTACATC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYPLYRV*SLNNYI
Trigger: GATGTAATTATTCAAAGAGCATACCCTATACAGTGG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGTCAATTTTGCATGCAGTATATaGATAAGCTTGTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CMQYMHKLVFCFIAKYVNFACSI*ISLFSA
Trigger: AGCAGAAAACAAGCTTATGCATATACTGCATGCAAA...ATTGACATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTTTGCATGCAGTATATaGATAAGCTTGTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYFACSI*ISLFSA
Trigger: AGCAGAAAACAAGCTTATGCATATACTGCATGCAAA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTTGGGTATTTATCAATaGAAGTTCTTCGTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYLGIYQ*KFFVSY
Trigger: ATAGCTGACGAAGAACTTGCATTGATAAATACCCAA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR GCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTTAAGGATGAAGAATTaGTCAAAAGGAAACACCACT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYLRMKN*SKGNTT
Trigger: AGTGGTGTTTCCTTTTGAGCAATTCTTCATCCTTAA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCAGCTGATTATAAGATaGTTTCCTTTGTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYQLIIR*FPLWSF
Trigger: AAAACTCCACAAAGGAAACCATCTTATAATCAGCTG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATATTGACTTTCCAATGTaGTCTTTGCAGCTATTTACT +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYIDFPM*SLQLFT
Trigger: AGTAAATAGCTGCAAAGACCACATTGGAAAGTCAAT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCATTGCAAAGTATGTCAATTGGATCAGTATCATTTaGTTCCACTTCAGATACAAA +
Preference number: 4 (lower is better)
Translates to: CMQYMHKLVFCFIAKYVNWISII*FHFRYK
Trigger: TTTGTATCTGAAGTGGAACCAAATGATACTGATCCA...ATTGACATACTTTGCAATGAAGCAGAAAACAAGCTTATGCATATACTGCATGCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATATTTGCAAATGTAAGTaGTGCTTCAAAAGCATTTGC +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYICKCK*CFKSIC
Trigger: GCAAATGCTTTTGAAGCACCACTTACATTTGCAAAT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAACATTCTTCAATACTaGCTCAATACCAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYNILQY*LNTRIK
Trigger: CTTGATTCTGGTATTGAGCCAGTATTGAAGAATGTT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTGGAAAAGACTTGCTTaGTACTATCTTCTATTTCAG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYWKRLA*YYLLFQ
Trigger: CTGAAATAGAAGATAGTACCAAGCAAGTCTTTTCCA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp TTGATAATATATCTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCAAACAGACTTCCTTTTaGCCATACAAAGTGATAAAG +
Preference number: 4 (lower is better)
Translates to: LIIYLTIRRRHQKLVSCTKQTSF*PYKVIK
Trigger: CTTTATCACTTTGTATGGCCAAAAGGAAGTCTGTTT...GGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAGATATATTATCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470094.1
ENST00000614259.2
CDS-3UTR CCA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAAACAGACTTCCTTTTaGCCATACAAAGTGATAAAG +
Preference number: 4 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYKQTSF*PYKVIK
Trigger: CTTTATCACTTTGTATGGCCAAAAGGAAGTCTGTTT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CCA 90 bp AATAATGGCCACTTTTTGGGTATCTGCACTACTAGTTTTATTGCTAGAAGTTTCAAACAGACTTCCTTTTaGCCATACAAAGTGATAAAG +
Preference number: 4 (lower is better)
Translates to: NNGHFLGICTTSFIARSFKQTSF*PYKVIK
Trigger: CTTTATCACTTTGTATGGCCAAAAGGAAGTCTGTTT...GAAACTTCTAGCAATAAAACTAGTAGTGCAGATACCCAAAAAGTGGCCATTATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAACACGCAGAGGGAACTaGGCCTCCTACTGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPTRRGN*ASYCCF
Trigger: AAAGCAGCAGTAGGAGGCCAAGTTCCCTCTGCGTGT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGTAAGAAGGCCTGATTaGGATTCTGGTCGCCACTGG +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPVRRPD*DSGRHW
Trigger: CCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTAC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATGGTGCCACAACTCCTaGGTGGCTGAAATGCCTTCT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPWCHNS*VAEMPS
Trigger: AGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACCA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACCTGACATCAGGAGTTaGAGACCAGCTTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPPDIRS*RPAWPT
Trigger: TGTTGGCCAAGCTGGTCTCAAACTCCTGATGTCAGG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGGAAAGAATCCAAGTTaGGTATACCAGCGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPGKNPS*VYQRAG
Trigger: GCCTGCTCGCTGGTATACCAAACTTGGATTCTTTCC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAAGCTCTGCACCATCTaGCAAAGCACGAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPKLCTI*QSTNLL
Trigger: CAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGCTT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGGTCGCCACTGGAGGTaGCTTGCAGCAATTAACATA +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPGRHWR*LAAINI
Trigger: TATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGAGTTTGAGACCAGCTaGGCCAACATGGTAAAACCC +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPEFETS*ANMVKP
Trigger: GGGTTTTACCATGTTGGCCAAGCTGGTCTCAAACTC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACGGCAGAGTCAGCCCTaGCTCTTTGAATATTATTGG +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPRQSQP*LFEYYW
Trigger: CCAATAATATTCAAAGAGCAAGGGCTGACTCTGCCG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTCTTTTACAGGAGATaGGTACAGCGGCAGAGTCAG +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPFFYRR*VQRQSQ
Trigger: CTGACTCTGCCGCTGTACCAATCTCCTGTAAAAGAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGCAGAGTGGATGTTTTaGCAAGATACAGACTGCCTG +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPAEWMF*QDTDCL
Trigger: CAGGCAGTCTGTATCTTGCAAAAACATCCACTCTGC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACACGAACTTGCTGTCTaGTTAGTGCACGTGATGGTA +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPHELAV*LVHVMV
Trigger: TACCATCACGTGCACTAACAAGACAGCAAGTTCGTG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGCCACTGGAGGTTGCTaGCAGCAATTAACATATGAG +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPATGGC*QQLTYE
Trigger: CTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGACGGTACAACTTCCTaGGAGATTTTGTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPDGTTS*EILSLP
Trigger: TGGAAGTGACAAAATCTCCAAGGAAGTTGTACCGTC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGTGCTTCAAAAGCATTaGCTTCAAACTGGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPVLQKH*LQTGLN
Trigger: GTTCAGCCCAGTTTGAAGCAAATGCTTTTGAAGCAC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAACTGTGATTTGAAATaGGACCTAAGAGTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPNCDLK*DLRVLP
Trigger: GGGCAGGACTCTTAGGTCCAATTTCAAATCACAGTT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAACTGTACCTTCAAATaGCTTGCTGCTGTCTACCTG +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPNCTFK*LAAVYL
Trigger: CAGGTAGACAGCAGCAAGCAATTTGAAGGTACAGTT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAACCATGACATGCTTCTaGAGCTTTCGCAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPTMTCF*SFRNFQ
Trigger: TTGGAAGTTGCGAAAGCTCAAGAAGCATGTCATGGT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATGGATTCTGTATCTCTaGACGTTCCTTAGTTGTGCG +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPWILYL*TFLSCA
Trigger: CGCACAACTAAGGAACGTCAAGAGATACAGAATCCA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGAAGACATCAGAAGCTaGTTTCCTGTACCAGGAATG +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPEDIRS*FPVPGM
Trigger: CATTCCTGGTACAGGAAACAAGCTTCTGATGTCTTC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACTAGGACATTTGGCATaGACTTTCCAATGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPLGHLA*TFQCGL
Trigger: AAGACCACATTGGAAAGTCAATGCCAAATGTCCTAG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGCTGCATTTTTATTTTaGCAGGGTGAAGAGCTAGTC +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPAAFLF*QGEELV
Trigger: GACTAGCTCTTCACCCTGCAAAAATAAAAATGCAGC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS CCA 90 bp GAACTTGGCCTCCTACTGCTGCTTTCAGAGAGATTCGAGGCAGAGTaGATGTTTTTGCAAGATACAGACTGCCTGGCTGTGGAAAGACGC +
Preference number: 5 (lower is better)
Translates to: ELGLLLLLSERFEAE*MFLQDTDCLAVERR
Trigger: GCGTCTTTCCACAGCCAGGCAGTCTGTATCTTGCAAAAACATCCACTCTGCCTCGAATCTCTCTGAAAGCAGCAGTAGGAGGCCAAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000665585.1
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAATGTTGGCCTCTCTTaGGATCCAATAGGCATTTTT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPNVGLS*DPIGIF
Trigger: AAAAATGCCTATTGGATCCAAAGAGAGGCCAACATT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTTCAGAAATATGTTTaGGTGTCTGACGACCCTTCA +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPFQKYV*VSDDPS
Trigger: TGAAGGGTCGTCAGACACCAAAACATATTTCTGAAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAACTTGCAGCTTCTCTTaGATTTGTGTTTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPTCSFS*ICVFTV
Trigger: GACAGTGAAAACACAAATCAAAGAGAAGCTGCAAGT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTCCAAATCCATGACTaGCAGCTTCTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPFQIHD*QLLFDL
Trigger: CAAATCAAAGAGAAGCTGCAAGTCATGGATTTGGAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACATCTTCTAGGACATTaGGCATTGACTTTCCAATGT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPHLLGH*ALTFQC
Trigger: ACATTGGAAAGTCAATGCCAAATGTCCTAGAAGATG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACTCCAAAACTGTGATTaGAAATTGGACCTAAGAGTC +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPLQNCD*KLDLRV
Trigger: GACTCTTAGGTCCAATTTCAAATCACAGTTTTGGAG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATCAACAAGTGACACTTaGGTTCCTAATACCAACTGT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSTSDT*VPNTNC
Trigger: ACAGTTGGTATTAGGAACCAAAGTGTCACTTGTTGA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAATCTTCGATCTTTTATaGTGCCATCTGGAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPIFDLL*CHLECF
Trigger: AAAGCACTCCAGATGGCACAATAAAAGATCGAAGAT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAAAGACGCGTTGCCTTaGTTTCTTCTTAATTCGCAT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPKDALP*FLLNSH
Trigger: ATGCGAATTAAGAAGAAACAAAGGCAACGCGTCTTT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAACCAGACAAAAGAGCTaGGGTATTTATCAATGCAAG +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPTRQKS*GIYQCK
Trigger: CTTGCATTGATAAATACCCAAGCTCTTTTGTCTGGT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACAAAGGGCTTCTGATTaGCTACATTTGAATCTAATG +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPQRASD*LHLNLM
Trigger: CATTAGATTCAAATGTAGCAAATCAGAAGCCCTTTG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACCTGAAAAACTTGCATaGAAAGTCTCTTTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPPEKLA*KVSLGD
Trigger: ATCACCTAAAGAGACTTTCAATGCAAGTTTTTCAGG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAAGACTTTTCTGGGATaGAAAGTCAGTATCACTGTA +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPKTFLG*KVSITV
Trigger: TACAGTGATACTGACTTTCAATCCCAGAAAAGTCTT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTGAAGATAAACTTATaGGATGTACCTCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPLKINL*DVPLQK
Trigger: CTTCTGCAGAGGTACATCCAATAAGTTTATCTTCAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGATTTGTGTAACAAGTaGCAGGACTTTTTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPDLCNK*QDFLLF
Trigger: AAACAGCAAAAAGTCCTGCAACTTGTTACACAAATC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAATCTTCATTTACAGTTaGTGGGTATGCATTTGCATC +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPIFIYS*WVCICI
Trigger: GATGCAAATGCATACCCACAAACTGTAAATGAAGAT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAAATCCCACAAGTATTaGCAGATGAGACTGACTTAT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPKSHKY*QMRLTY
Trigger: ATAAGTCAGTCTCATCTGCAAATACTTGTGGGATTT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACAGAAAACACTTGTCTaGCGTTTTGTAATGAAGCAT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPQKTLV*RFVMKH
Trigger: ATGCTTCATTACAAAACGCAAGACAAGTGTTTTCTG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCATTTAGACAGAAATTCTaGACCAGGTGCGGTAAAATT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPFRQKF*TRCGKI
Trigger: AATTTTACCGCACCTGGTCAAGAATTTCTGTCTAAA...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AAGTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAACACGCAGAGGGAACTaGGCCTCCTACTGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: KSSGLRQVWKQTSFWPYKTRRGN*ASYCCF
Trigger: AAAGCAGCAGTAGGAGGCCAAGTTCCCTCTGCGTGT...TTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCACAACTGGATCTGAGCTaGTTTCTTATCATTCAACAT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPQLDLS*FLIIQH
Trigger: ATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTG...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGCAGTGTACGGCCCGTAAGAAGGCCTGATTaGGATTCTGGTCGCCACTGG +
Preference number: 5 (lower is better)
Translates to: RHQKLVSCTRNDLSSVRPVRRPD*DSGRHW
Trigger: CCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTAC...GGGCCGTACACTGCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp GTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTTGGTGCCACAACTCCTaGGTGGCTGAAATGCCTTCT +
Preference number: 5 (lower is better)
Translates to: VIWAETGVETDFLLAIQSWCHNS*VAEMPS
Trigger: AGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACCA...ACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAGTTCTTCGTCAGCTATaGAATTACTTTCCAAAAGAG +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPVLRQL*NYFPKE
Trigger: CTCTTTTGGAAAGTAATTCAATAGCTGACGAAGAAC...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCTTGAGGTGGGAGAATTACGTGAACCCGGGAAGTGGAGGCTGCAGTGAGCCAAGCGTCAATAATTTATaGTCGCCTTTGCAAATGCTT +
Preference number: 5 (lower is better)
Translates to: GLRWENYVNPGSGGCSEPSVNNL*SPLQML
Trigger: AAGCATTTGCAAAGGCGACAATAAATTATTGACGCT...TGGCTCACTGCAGCCTCCACTTCCCGGGTTCACGTAATTCTCCCACCTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTCGGCAGAGTCAGCCCTaGCTCTTTGAATATTATTGG +
Preference number: 5 (lower is better)
Translates to: VRRPDLDSGRHWRLLAAIRQSQP*LFEYYW
Trigger: CCAATAATATTCAAAGAGCAAGGGCTGACTCTGCCG...AATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp GTGTACGGCCCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTTTCTTTTACAGGAGATaGGTACAGCGGCAGAGTCAG +
Preference number: 5 (lower is better)
Translates to: VYGPEVQSLVGVDHLGSFFFYRR*VQRQSQ
Trigger: CTGACTCTGCCGCTGTACCAATCTCCTGTAAAAGAA...AAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGGCCGTACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp ATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGGCTGTAAGAAGGCCTGATTaGGATTCTGGTCGCCACTGG +
Preference number: 5 (lower is better)
Translates to: IWILVATGGCLQQLTYEAVRRPD*DSGRHW
Trigger: CCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTAC...AGCCTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614259.2
ENST00000665585.1
ENST00000666593.1
CDS-3UTR CAA 90 bp GGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTCCGAGATTGTGCTATaGTACTCCAGCCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: GGPLGIICMQYMHKLVFCSEIVL*YSSLGV
Trigger: CACCCCCAGGCTGGAGTACAATAGCACAATCTCGGA...GCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470094.1
CDS-3UTR CAA 90 bp CTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGGCACGAGAATCGCTaGAGCCCAGGAGGCAGACAC +
Preference number: 5 (lower is better)
Translates to: LTIRRRHQKLVSCTRNDLRHENR*SPGGRH
Trigger: GTGTCTGCCTCCTGGGCTCAAGCGATTCTCGTGCCT...CAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470094.1
CDS GCA 90 bp CAGCTGTTTATGAGAACACGCAGAGGGAACTTGGCCTCCTACTGCTaGTTTCAGAGAGATTCGAGGCAGAGTGGATGTTTTTGCAAGATA +
Preference number: 5 (lower is better)
Translates to: QLFMRTRRGNLASYC*FQRDSRQSGCFCKI
Trigger: TATCTTGCAAAAACATCCACTCTGCCTCGAATCTCTCTGAAAGCAGCAGTAGGAGGCCAAGTTCCCTCTGCGTGTTCTCATAAACAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000665585.1
ENST00000680887.1
CDS GCA 90 bp ATACAGCTGTTTATGAGAACACGCAGAGGGAACTTGGCCTCCTACTaGTGCTTTCAGAGAGATTCGAGGCAGAGTGGATGTTTTTGCAAG +
Preference number: 5 (lower is better)
Translates to: IQLFMRTRRGNLASY*CFQRDSRQSGCFCK
Trigger: CTTGCAAAAACATCCACTCTGCCTCGAATCTCTCTGAAAGCAGCAGTAGGAGGCCAAGTTCCCTCTGCGTGTTCTCATAAACAGCTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000665585.1
ENST00000680887.1
CDS-3UTR CAA 90 bp AGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGCAGTGTACGGCCCGCAGAGTGGATGTTTTaGCAAGATACAGACTGCCTG +
Preference number: 5 (lower is better)
Translates to: RHQKLVSCTRNDLSSVRPAEWMF*QDTDCL
Trigger: CAGGCAGTCTGTATCTTGCAAAAACATCCACTCTGC...GGGCCGTACACTGCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp ATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGATGGAAAGAATCCAAGTTaGGTATACCAGCGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: IWAETGVETDFLLAIQSDGKNPS*VYQRAG
Trigger: GCCTGCTCGCTGGTATACCAAACTTGGATTCTTTCC...ATCACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp CTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAGGGCCTCCACATATTTaGCTGCTTCCTTTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LHHLAKHELAVLLVHVMVGPPHI*LLPFLP
Trigger: AGGAAGAAAAGGAAGCAGCAAAATATGTGGAGGCCC...TACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp AAGACTTTGAAGTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGAAGCTCTGCACCATCTaGCAAAGCACGAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: KTLKSSGLRQVWKQTSFWKLCTI*QSTNLL
Trigger: CAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGCTT...CCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGACTTCAAAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp CGAAAGGGGCAAGTCTGTCATTCTGTCATCACGATGGTCATGTTTCCTGGAAATGGTCGCCACTGGAGGTaGCTTGCAGCAATTAACATA +
Preference number: 5 (lower is better)
Translates to: RKGQVCHSVITMVMFPGNGRHWR*LAAINI
Trigger: TATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACC...ATTTCCAGGAAACATGACCATCGTGATGACAGAATGACAGACTTGCCCCTTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666593.1
CDS-3UTR CAA 90 bp CTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGATAAAGGACGTAAGAAGGCCTGATTaGGATTCTGGTCGCCACTGG +
Preference number: 5 (lower is better)
Translates to: LRQVWKQTSFWPYKVIKDVRRPD*DSGRHW
Trigger: CCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTAC...GTCCTTTATCACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470094.1
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGTAAGAAGGCCTGATTaGGATTCTGGTCGCCACTGG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLVRRPD*DSGRHW
Trigger: CCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTAC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTGTTGGGGTGGACCACTaGGGATCATTTGCATGCAGT +
Preference number: 5 (lower is better)
Translates to: SWGGPLGIICMQYMHKLVVGVDH*GSFACS
Trigger: ACTGCATGCAAATGATCCCAAGTGGTCCACCCCAAC...AACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGTTGGGGTGGACCACTaGGGATCATTTGCATGCAGT +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLVGVDH*GSFACS
Trigger: ACTGCATGCAAATGATCCCAAGTGGTCCACCCCAAC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGTTGGGGTGGACCACTaGGGATCATTTGCATGCAGT +
Preference number: 5 (lower is better)
Translates to: GVDHLGSFACSICISLFSVGVDH*GSFACS
Trigger: ACTGCATGCAAATGATCCCAAGTGGTCCACCCCAAC...AGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTGGTGCCACAACTCCTaGGTGGCTGAAATGCCTTCT +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLWCHNS*VAEMPS
Trigger: AGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACCA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS GCA 90 bp GTTCTCCCTGTACTCTCTTTCCTGCCACCTTGTGAAGAAGGTACTTaGTTCTCCTTCATCTTCCACTATGATTGTAAGTTTCCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: VLPVLSFLPPCEEGT*FSFIFHYDCKFPEA
Trigger: GGCCTCAGGAAACTTACAATCATAGTGGAAGATGAAGGAGAAGCAAGTACCTTCTTCACAAGGTGGCAGGAAAGAGAGTACAGGGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665585.1
CDS CCA 90 bp TCGAGGCAGAGTGGATGTTTTTGCAAGATACAGACTGCCTGGCTGTaGAAAGACGCGTTGCCTTTGTTTCTTCTTAATTCGCATATCCTG +
Preference number: 5 (lower is better)
Translates to: SRQSGCFCKIQTAWL*KDALPLFLLNSHIL
Trigger: CAGGATATGCGAATTAAGAAGAAACAAAGGCAACGCGTCTTTCCACAGCCAGGCAGTCTGTATCTTGCAAAAACATCCACTCTGCCTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000665585.1
ENST00000680887.1
CDS-3UTR CAA 90 bp ATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGATGCAGAGTGGATGTTTTaGCAAGATACAGACTGCCTG +
Preference number: 5 (lower is better)
Translates to: IWAETGVETDFLLAIQSDAEWMF*QDTDCL
Trigger: CAGGCAGTCTGTATCTTGCAAAAACATCCACTCTGC...ATCACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGGAAAGAATCCAAGTTaGGTATACCAGCGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLGKNPS*VYQRAG
Trigger: GCCTGCTCGCTGGTATACCAAACTTGGATTCTTTCC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTAAGCTCTGCACCATCTaGCAAAGCACGAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: GVDHLGSFACSICISLFSKLCTI*QSTNLL
Trigger: CAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGCTT...AGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAAGCTCTGCACCATCTaGCAAAGCACGAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLKLCTI*QSTNLL
Trigger: CAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGCTT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AAGTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGCCACTGGAGGTTGCTaGCAGCAATTAACATATGAG +
Preference number: 5 (lower is better)
Translates to: KSSGLRQVWKQTSFWPYKATGGC*QQLTYE
Trigger: CTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGC...TTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470094.1
ENST00000614259.2
CDS-3UTR CAA 90 bp GTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCGCCACTGGAGGTTGCTaGCAGCAATTAACATATGAG +
Preference number: 5 (lower is better)
Translates to: VQSLVGVDHLGSFACSICATGGC*QQLTYE
Trigger: CTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGC...GCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp AATAAAGTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCCACTGGAGGTTGCTaGCAGCAATTAACATATGAG +
Preference number: 5 (lower is better)
Translates to: NKVRRPDLDSGRHWRLLAATGGC*QQLTYE
Trigger: CTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGC...TGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACTTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614259.2
ENST00000665585.1
ENST00000666593.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGGTCGCCACTGGAGGTaGCTTGCAGCAATTAACATA +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLGRHWR*LAAINI
Trigger: TATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTGGTCGCCACTGGAGGTaGCTTGCAGCAATTAACATA +
Preference number: 5 (lower is better)
Translates to: SWGGPLGIICMQYMHKLVGRHWR*LAAINI
Trigger: TATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACC...AACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp GGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTCGGGCAAAACGATTTTaGCCCGATACACAAACGCTG +
Preference number: 5 (lower is better)
Translates to: GVDHLGSFACSICISLFSRAKRF*PDTQTL
Trigger: CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCG...AGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS TCA 90 bp GGTATTTTCTCCATCTGGGCTCCATTTAGACCTGAAAGGGTTAGTTaGGACCATTCACAGGCCAAAGACGGTACAACTTCCTTGGAGATT +
Preference number: 5 (lower is better)
Translates to: GIFSIWAPFRPERVS*DHSQAKDGTTSLEI
Trigger: AATCTCCAAGGAAGTTGTACCGTCTTTGGCCTGTGAATGGTCTCAACTAACCCTTTCAGGTCTAAATGGAGCCCAGATGGAGAAAATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380152.8
ENST00000530893.6
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS CCA 90 bp GGGTTAGTTGAGACCATTCACAGGCCAAAGACGGTACAACTTCCTTaGAGATTTTGTCACTTCCACTCTCAAAGGGCTTCTGATTTGCTA +
Preference number: 5 (lower is better)
Translates to: GLVETIHRPKTVQLP*RFCHFHSQRASDLL
Trigger: TAGCAAATCAGAAGCCCTTTGAGAGTGGAAGTGACAAAATCTCCAAGGAAGTTGTACCGTCTTTGGCCTGTGAATGGTCTCAACTAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380152.8
ENST00000530893.6
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTCTTTTACAGGAGATaGGTACAGCGGCAGAGTCAG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLFFYRR*VQRQSQ
Trigger: CTGACTCTGCCGCTGTACCAATCTCCTGTAAAAGAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AATAAAGTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGACGGTACAACTTCCTaGGAGATTTTGTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: NKVRRPDLDSGRHWRLLADGTTS*EILSLP
Trigger: TGGAAGTGACAAAATCTCCAAGGAAGTTGTACCGTC...TGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp CAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAGGTGGAACAAAGACTTaGGTTGGTCTGCCTGTAGTA +
Preference number: 5 (lower is better)
Translates to: QSLVGVDHLGSFACSICIGGTKT*VGLPVV
Trigger: TACTACAGGCAGACCAACCAAAGTCTTTGTTCCACC...TATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGCAGAGTGGATGTTTTaGCAAGATACAGACTGCCTG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLAEWMF*QDTDCL
Trigger: CAGGCAGTCTGTATCTTGCAAAAACATCCACTCTGC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTGGAAAGAATCCAAGTTaGGTATACCAGCGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: LFSRFHGLPNFQLDLSLFGKNPS*VYQRAG
Trigger: GCCTGCTCGCTGGTATACCAAACTTGGATTCTTTCC...AAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp CTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGCACGAACTTGCTGTCTaGTTAGTGCACGTGATGGTA +
Preference number: 5 (lower is better)
Translates to: LLFSRFHGLPNFQLDLSLHELAV*LVHVMV
Trigger: TACCATCACGTGCACTAACAAGACAGCAAGTTCGTG...CAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCACGAACTTGCTGTCTaGTTAGTGCACGTGATGGTA +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLHELAV*LVHVMV
Trigger: TACCATCACGTGCACTAACAAGACAGCAAGTTCGTG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp CTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTAAGCTCTGCACCATCTaGCAAAGCACGAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: LAKHELAVLLVHVMVNMVKLCTI*QSTNLL
Trigger: CAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGCTT...AACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGCCACTGGAGGTTGCTaGCAGCAATTAACATATGAG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLATGGC*QQLTYE
Trigger: CTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGATGGGTGTTTCGTATTaGGTGCCACAACTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLMGVSY*VPQLLG
Trigger: ACCAAGGAGTTGTGGCACCAAATACGAAACACCCAT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GTTGTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCATGGGTGTTTCGTATTaGGTGCCACAACTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: VVTSLDKPCSFCSADSMAMGVSY*VPQLLG
Trigger: ACCAAGGAGTTGTGGCACCAAATACGAAACACCCAT...GGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp CGAAAGGGGCAAGTCTGTCATTCTGTCATCACGATGGTCATGTTTCCTGGAAATCCTTCCAATACTCTGTaGCTCCCAAGTTCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: RKGQVCHSVITMVMFPGNPSNTL*LPSSLF
Trigger: AAACAAGGAACTTGGGAGCAACAGAGTATTGGAAGG...ATTTCCAGGAAACATGACCATCGTGATGACAGAATGACAGACTTGCCCCTTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666593.1
CDS CCA 90 bp AACTGTACCTTCAAATTGCTTGCTGCTGTCTACCTGACCAATCGATaGGGCATTCATTATGACATGAAGATCAGCATCTCTGCATTCCTC +
Preference number: 5 (lower is better)
Translates to: NCTFKLLAAVYLTNR*GIHYDMKISISAFL
Trigger: GAGGAATGCAGAGATGCTGATCTTCATGTCATAATGAATGCCCCATCGATTGGTCAGGTAGACAGCAGCAAGCAATTTGAAGGTACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp CTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGACTTCCTTGGAGATTTaGTCACTTCCACTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: LIWILVATGGCLQQLTYETSLEI*SLPLSK
Trigger: CTTTGAGAGTGGAAGTGACAAAATCTCCAAGGAAGT...CTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGACGGTACAACTTCCTaGGAGATTTTGTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLDGTTS*EILSLP
Trigger: TGGAAGTGACAAAATCTCCAAGGAAGTTGTACCGTC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGTGCTTCAAAAGCATTaGCTTCAAACTGGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLVLQKH*LQTGLN
Trigger: GTTCAGCCCAGTTTGAAGCAAATGCTTTTGAAGCAC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GTCAGTCTGCCATTCTTTAAGACAGCTAAGAGGGGAGGATCTAACTGGGCCTTAACCATGGTAGAGTTCTaGAAAATGGGTTCGTTTACA +
Preference number: 5 (lower is better)
Translates to: VSLPFFKTAKRGGSNWALTMVEF*KMGSFT
Trigger: TGTAAACGAACCCATTTTCAAGAACTCTACCATGGT...TAAGGCCCAGTTAGATCCTCCCCTCTTAGCTGTCTTAAAGAATGGCAGACTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAACTGTACCTTCAAATaGCTTGCTGCTGTCTACCTG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLNCTFK*LAAVYL
Trigger: CAGGTAGACAGCAGCAAGCAATTTGAAGGTACAGTT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGACCATGACATGCTTCTaGAGCTTTCGCAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLTMTCF*SFRNFQ
Trigger: TTGGAAGTTGCGAAAGCTCAAGAAGCATGTCATGGT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGCAGTGTACGGCCCATCTTCGATCTTTTATaGTGCCATCTGGAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: RHQKLVSCTRNDLSSVRPIFDLL*CHLECF
Trigger: AAAGCACTCCAGATGGCACAATAAAAGATCGAAGAT...GGGCCGTACACTGCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTGGATTCTGTATCTCTaGACGTTCCTTAGTTGTGCG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLWILYL*TFLSCA
Trigger: CGCACAACTAAGGAACGTCAAGAGATACAGAATCCA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp CTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGCTGTGGAAAGACGCGTaGCCTTTGTTTCTTCTTAAT +
Preference number: 5 (lower is better)
Translates to: LIWILVATGGCLQQLTYELWKDA*PLFLLN
Trigger: ATTAAGAAGAAACAAAGGCAACGCGTCTTTCCACAG...CTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp CATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGGGCCTCCACATATTTaGCTGCTTCCTTTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: HLAKHELAVLLVHVMVNMGPPHI*LLPFLP
Trigger: AGGAAGAAAAGGAAGCAGCAAAATATGTGGAGGCCC...CATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp GCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTTGCACGAACTTGCTGTCTaGTTAGTGCACGTGATGGTA +
Preference number: 5 (lower is better)
Translates to: AKHELAVLLVHVMVNMVLHELAV*LVHVMV
Trigger: TACCATCACGTGCACTAACAAGACAGCAAGTTCGTG...CAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp GTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTCACGAACTTGCTGTCTaGTTAGTGCACGTGATGGTA +
Preference number: 5 (lower is better)
Translates to: VDHLGSFACSICISLFSAHELAV*LVHVMV
Trigger: TACCATCACGTGCACTAACAAGACAGCAAGTTCGTG...AGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp GTAAGAAGGCCTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTCTTATCATTCAACATTaGCCTGTGATTATTCAAGGC +
Preference number: 5 (lower is better)
Translates to: VRRPDLDSGRHWRLLAAILIIQH*PVIIQG
Trigger: GCCTTGAATAATCACAGGCAAATGTTGAATGATAAG...AATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGAAGACATCAGAAGCTaGTTTCCTGTACCAGGAATG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLEDIRS*FPVPGM
Trigger: CATTCCTGGTACAGGAAACAAGCTTCTGATGTCTTC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GTGTACGGCCCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTAGCGTCAATAATTTATaGTCGCCTTTGCAAATGCTT +
Preference number: 5 (lower is better)
Translates to: VYGPEVQSLVGVDHLGSFSVNNL*SPLQML
Trigger: AAGCATTTGCAAAGGCGACAATAAATTATTGACGCT...AAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGGCCGTACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp CTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGGAGTTTGAGACCAGCTaGGCCAACATGGTAAAACCC +
Preference number: 5 (lower is better)
Translates to: LTIRRRHQKLVSCTRNDLEFETS*ANMVKP
Trigger: GGGTTTTACCATGTTGGCCAAGCTGGTCTCAAACTC...CAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp CTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGCCCTGACATCAGGAGTTaGAGACCAGCTTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: LDLSLFLIIQHLPVIIQGPDIRS*RPAWPT
Trigger: TGTTGGCCAAGCTGGTCTCAAACTCCTGATGTCAGG...GCCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS TCA 90 bp CTTTTACAGGAGATTGGTACAGCGGCAGAGTCAGCCCTTGCTCTTTaGATATTATTGGAGTTGAAGCCAGCTGATTATAAGATGGTTTCC +
Preference number: 5 (lower is better)
Translates to: LLQEIGTAAESALAL*ILLELKPADYKMVS
Trigger: GGAAACCATCTTATAATCAGCTGGCTTCAACTCCAATAATATTCAAAGAGCAAGGGCTGACTCTGCCGCTGTACCAATCTCCTGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380152.8
ENST00000530893.6
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS GCA 90 bp GATGTTTTTGCAAGATACAGACTGCCTGGCTGTGGAAAGACGCGTTaGCTTTGTTTCTTCTTAATTCGCATATCCTGTATATCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: DVFARYRLPGCGKTR*LCFFLIRISCISLA
Trigger: TGCCAGAGATATACAGGATATGCGAATTAAGAAGAAACAAAGGCAACGCGTCTTTCCACAGCCAGGCAGTCTGTATCTTGCAAAAACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000665585.1
ENST00000680887.1
CDS-3UTR CAA 90 bp CTGATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGGTCAGCCCTTGCTCTTaGAATATTATTGGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: LIWILVATGGCLQQLTYEVSPCS*NIIGVE
Trigger: TTCAACTCCAATAATATTCAAAGAGCAAGGGCTGAC...CTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGACTTCCTTGGAGATTTaGTCACTTCCACTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLTSLEI*SLPLSK
Trigger: CTTTGAGAGTGGAAGTGACAAAATCTCCAAGGAAGT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp CTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTGTGCTTCAAAAGCATTaGCTTCAAACTGGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: LAKHELAVLLVHVMVNMVVLQKH*LQTGLN
Trigger: GTTCAGCCCAGTTTGAAGCAAATGCTTTTGAAGCAC...AACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp GTCAGTCTGCCATTCTTTAAGACAGCTAAGAGGGGAGGATCTAACTGGGCCTTAAAGACTTTTCTGGGATaGAAAGTCAGTATCACTGTA +
Preference number: 5 (lower is better)
Translates to: VSLPFFKTAKRGGSNWALKTFLG*KVSITV
Trigger: TACAGTGATACTGACTTTCAATCCCAGAAAAGTCTT...TAAGGCCCAGTTAGATCCTCCCCTCTTAGCTGTCTTAAAGAATGGCAGACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp CCTGAAGTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTTTGAAGATAAACTTATaGGATGTACCTCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: PEVQSLVGVDHLGSFACSLKINL*DVPLQK
Trigger: CTTCTGCAGAGGTACATCCAATAAGTTTATCTTCAA...ACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp GTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTACCATGACATGCTTCTaGAGCTTTCGCAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: VDHLGSFACSICISLFSATMTCF*SFRNFQ
Trigger: TTGGAAGTTGCGAAAGCTCAAGAAGCATGTCATGGT...AGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAATAAGGGGACTGATTaGTGTAACAAGTTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLNKGTD*CNKLQD
Trigger: GTCCTGCAACTTGTTACACAAATCAGTCCCCTTATT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGGCTGCATTTTTATTTTaGCAGGGTGAAGAGCTAGTC +
Preference number: 5 (lower is better)
Translates to: LVGVDHLGSFACSICISLAAFLF*QGEELV
Trigger: GACTAGCTCTTCACCCTGCAAAAATAAAAATGCAGC...CAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCTGTGGAAAGACGCGTaGCCTTTGTTTCTTCTTAAT +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLWKDA*PLFLLN
Trigger: ATTAAGAAGAAACAAAGGCAACGCGTCTTTCCACAG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATACACGCAGAGGGAACTaGGCCTCCTACTGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYTRRGN*ASYCCF
Trigger: AAAGCAGCAGTAGGAGGCCAAGTTCCCTCTGCGTGT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp CAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAACACGCAGAGGGAACTaGGCCTCCTACTGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: QLDLSLFLIIQHLPVIIQTRRGN*ASYCCF
Trigger: AAAGCAGCAGTAGGAGGCCAAGTTCCCTCTGCGTGT...TTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp CTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTACTTATCATTCAACATTaGCCTGTGATTATTCAAGGC +
Preference number: 5 (lower is better)
Translates to: LHHLAKHELAVLLVHVMVLIIQH*PVIIQG
Trigger: GCCTTGAATAATCACAGGCAAATGTTGAATGATAAG...TACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp CTGCACCATCTTGCAAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTACAACTGGATCTGAGCTaGTTTCTTATCATTCAACAT +
Preference number: 5 (lower is better)
Translates to: LHHLAKHELAVLLVHVMVQLDLS*FLIIQH
Trigger: ATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTG...TACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp AAAGCACGAACTTGCTGTCTTGTTAGTGCACGTGATGGTAAATATGGTTTTGTTGGTCGCCACTGGAGGTaGCTTGCAGCAATTAACATA +
Preference number: 5 (lower is better)
Translates to: KARTCCLVSARDGKYGFVGRHWR*LAAINI
Trigger: TATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACC...AACAAAACCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp ACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGATTATTCAAGGGTAAGAAGGCCTGATTaGGATTCTGGTCGCCACTGG +
Preference number: 5 (lower is better)
Translates to: TGSELVSYHSTFACDYSRVRRPD*DSGRHW
Trigger: CCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTAC...CCTTGAATAATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp GTCATCTGGGCTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGTTCTTCGTCAGCTATaGAATTACTTTCCAAAAGAG +
Preference number: 5 (lower is better)
Translates to: VIWAETGVETDFLLAIQSVLRQL*NYFPKE
Trigger: CTCTTTTGGAAAGTAATTCAATAGCTGACGAAGAAC...ACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS TCA 90 bp TTGATCTTTTCATCACGTTCGGGTTGTCCCTGGAAGGTCACTAGTTaGTTTCCAGTACCAACTGGGACACTTTCTTTCAGTATTTTGTGT +
Preference number: 5 (lower is better)
Translates to: LIFSSRSGCPWKVTS*FPVPTGTLSFSILC
Trigger: ACACAAAATACTGAAAGAAAGTGTCCCAGTTGGTACTGGAAATCAACTAGTGACCTTCCAGGGACAACCCGAACGTGATGAAAAGATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS TCA 90 bp TCAAGGTCTTTACAGGCCTCTCTGTACTTTAGGGTCTTTGCCCATTaGTGGCTAAAACTGGTGATTTCACTAGTACCTTGCTCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: SRSLQASLYFRVFAH*WLKLVISLVPCSFS
Trigger: TGAAAAAGAGCAAGGTACTAGTGAAATCACCAGTTTTAGCCATCAATGGGCAAAGACCCTAAAGTACAGAGAGGCCTGTAAAGACCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS GCA 90 bp AAGCCACTGGAGAAGTTCCAGATATTGCCTGCTTTACTGCAAGAATaGAGTCTGTATGAGATTCAAGATGCTGCTCTTCATCTCTCTTAT +
Preference number: 5 (lower is better)
Translates to: KPLEKFQILPALLQE*SLYEIQDAALHLSY
Trigger: ATAAGAGAGATGAAGAGCAGCATCTTGAATCTCATACAGACTGCATTCTTGCAGTAAAGCAGGCAATATCTGGAACTTCTCCAGTGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380152.8
ENST00000530893.6
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAATGTTGGCCTCTCTTaGGATCCAATAGGCATTTTT +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLNVGLS*DPIGIF
Trigger: AAAAATGCCTATTGGATCCAAAGAGAGGCCAACATT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGTCAGCCCTTGCTCTTaGAATATTATTGGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLVSPCS*NIIGVE
Trigger: TTCAACTCCAATAATATTCAAAGAGCAAGGGCTGAC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GTACAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCCTTTTATGTCTACTATaGGGAACATTCCTTCCTAAG +
Preference number: 5 (lower is better)
Translates to: VQSLVGVDHLGSFACSICLLCLL*GTFLPK
Trigger: CTTAGGAAGGAATGTTCCCAATAGTAGACATAAAAG...GCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTTCAGAAATATGTTTaGGTGTCTGACGACCCTTCA +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLFQKYV*VSDDPS
Trigger: TGAAGGGTCGTCAGACACCAAAACATATTTCTGAAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGACTTGCAGCTTCTCTTaGATTTGTGTTTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLTCSFS*ICVFTV
Trigger: GACAGTGAAAACACAAATCAAAGAGAAGCTGCAAGT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp CTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGATAAAGGACACTTGCAGCTTCTCTTaGATTTGTGTTTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: LRQVWKQTSFWPYKVIKDTCSFS*ICVFTV
Trigger: GACAGTGAAAACACAAATCAAAGAGAAGCTGCAAGT...GTCCTTTATCACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp GGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTTTCCAAATCCATGACTaGCAGCTTCTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: GVDHLGSFACSICISLFSFQIHD*QLLFDL
Trigger: CAAATCAAAGAGAAGCTGCAAGTCATGGATTTGGAA...AGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTCCAAATCCATGACTaGCAGCTTCTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLFQIHD*QLLFDL
Trigger: CAAATCAAAGAGAAGCTGCAAGTCATGGATTTGGAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp ACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTAGGACATTTGGCATaGACTTTCCAATGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: TLFLLFSRFHGLPNFQLDLGHLA*TFQCGL
Trigger: AAGACCACATTGGAAAGTCAATGCCAAATGTCCTAG...ATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp CTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGATAAAGGACCATCTTCTAGGACATTaGGCATTGACTTTCCAATGT +
Preference number: 5 (lower is better)
Translates to: LRQVWKQTSFWPYKVIKDHLLGH*ALTFQC
Trigger: ACATTGGAAAGTCAATGCCAAATGTCCTAGAAGATG...GTCCTTTATCACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGACCATGGTAGAGTTCTaGAAAATGGGTTCGTTTACA +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLTMVEF*KMGSFT
Trigger: TGTAAACGAACCCATTTTCAAGAACTCTACCATGGT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCTCCAAAACTGTGATTaGAAATTGGACCTAAGAGTC +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLQNCD*KLDLRV
Trigger: GACTCTTAGGTCCAATTTCAAATCACAGTTTTGGAG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTCTCCAAAACTGTGATTaGAAATTGGACCTAAGAGTC +
Preference number: 5 (lower is better)
Translates to: SWGGPLGIICMQYMHKLVLQNCD*KLDLRV
Trigger: GACTCTTAGGTCCAATTTCAAATCACAGTTTTGGAG...AACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp ATTTGGATTCTGGTCGCCACTGGAGGTTGCTTGCAGCAATTAACATATGAGGCTGATTTGTGTAACAAGTaGCAGGACTTTTTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: IWILVATGGCLQQLTYEADLCNK*QDFLLF
Trigger: AAACAGCAAAAAGTCCTGCAACTTGTTACACAAATC...AGCCTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTCAACAAGTGACACTTaGGTTCCTAATACCAACTGT +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLSTSDT*VPNTNC
Trigger: ACAGTTGGTATTAGGAACCAAAGTGTCACTTGTTGA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGATCTTCGATCTTTTATaGTGCCATCTGGAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLIFDLL*CHLECF
Trigger: AAAGCACTCCAGATGGCACAATAAAAGATCGAAGAT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GTTGTGACATCCCTTGATAAACCTTGTTCCTTTTGTTCAGCAGATTCCATGGCCAAAGACGCGTTGCCTTaGTTTCTTCTTAATTCGCAT +
Preference number: 5 (lower is better)
Translates to: VVTSLDKPCSFCSADSMAKDALP*FLLNSH
Trigger: ATGCGAATTAAGAAGAAACAAAGGCAACGCGTCTTT...GGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAATAATGGCCACTTTTaGGGTATCTGCACTACTAGT +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLNNGHF*GICTTS
Trigger: ACTAGTAGTGCAGATACCCAAAAAGTGGCCATTATT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCAATAATGGCCACTTTTaGGGTATCTGCACTACTAGT +
Preference number: 5 (lower is better)
Translates to: GGPLGIICMQYMHKLVFCNNGHF*GICTTS
Trigger: ACTAGTAGTGCAGATACCCAAAAAGTGGCCATTATT...GCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp GGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGGCCACTGGAGGTTGCTaGCAGCAATTAACATATGAG +
Preference number: 5 (lower is better)
Translates to: GLPNFQLDLSLFLIIQHLATGGC*QQLTYE
Trigger: CTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGC...CAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGTAAGAAGGCCTGATTaGGATTCTGGTCGCCACTGG +
Preference number: 5 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYVRRPD*DSGRHW
Trigger: CCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTAC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGTTGGGGTGGACCACTaGGGATCATTTGCATGCAGT +
Preference number: 5 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYVGVDH*GSFACS
Trigger: ACTGCATGCAAATGATCCCAAGTGGTCCACCCCAAC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp ACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCAGGAATGATTTGAGCGAAGACATCAGAAGCTaGTTTCCTGTACCAGGAATG +
Preference number: 5 (lower is better)
Translates to: TIRRRHQKLVSCTRNDLSEDIRS*FPVPGM
Trigger: CATTCCTGGTACAGGAAACAAGCTTCTGATGTCTTC...GCTCAAATCATTCCTGGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGACCAGACAAAAGAGCTaGGGTATTTATCAATGCAAG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLTRQKS*GIYQCK
Trigger: CTTGCATTGATAAATACCCAAGCTCTTTTGTCTGGT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp CAGTCTTTAGTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAACCAGACAAAAGAGCTaGGGTATTTATCAATGCAAG +
Preference number: 5 (lower is better)
Translates to: QSLVGVDHLGSFACSICITRQKS*GIYQCK
Trigger: CTTGCATTGATAAATACCCAAGCTCTTTTGTCTGGT...TATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGAACTCTCCTGTTCTTaGATCAGAGATGTAGTACAA +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLELSCS*IRDVVQ
Trigger: TTGTACTACATCTCTGATCAAAGAACAGGAGAGTTC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp CTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGGAACTCTCCTGTTCTTaGATCAGAGATGTAGTACAA +
Preference number: 5 (lower is better)
Translates to: LLFSRFHGLPNFQLDLSLELSCS*IRDVVQ
Trigger: TTGTACTACATCTCTGATCAAAGAACAGGAGAGTTC...CAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCCTGACATCAGGAGTTaGAGACCAGCTTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYPDIRS*RPAWPT
Trigger: TGTTGGCCAAGCTGGTCTCAAACTCCTGATGTCAGG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTGTTTTCAGAAGTaGATTCCAACCCTCATGGAT +
Preference number: 5 (lower is better)
Translates to: FLLFSRFHGLPNFQLDLSLCFQK*IPTLMD
Trigger: ATCCATGAGGGTTGGAATCAACTTCTGAAAACACAA...GCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528762.1
ENST00000665585.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGATATTCCTCCAATGCTaGGTAAATAAGTCAGTGACG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLIFLQC*VNKSVT
Trigger: CGTCACTGACTTATTTACCAAGCATTGGAGGAATAT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680887.1
CDS TCA 90 bp GTACAGCGGCAGAGTCAGCCCTTGCTCTTTGAATATTATTGGAGTTaGAGCCAGCTGATTATAAGATGGTTTCCTTTGTGGAGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: VQRQSQPLLFEYYWS*SQLIIRWFPLWSFK
Trigger: TTTAAAACTCCACAAAGGAAACCATCTTATAATCAGCTGGCTTCAACTCCAATAATATTCAAAGAGCAAGGGCTGACTCTGCCGCTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380152.8
ENST00000530893.6
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS TCA 90 bp AAGACTTTTCTGGGATTGAAAGTCAGTATCACTGTATTCCACTTTTaGATGTTGTACTGGGTGACATGCTGCAGCCAAGACCTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: KTFLGLKVSITVFHF*MLYWVTCCSQDLFF
Trigger: AAAGAAGAGGTCTTGGCTGCAGCATGTCACCCAGTACAACATTCAAAAGTGGAATACAGTGATACTGACTTTCAATCCCAGAAAAGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCTTTTATGTCTACTATaGGGAACATTCCTTCCTAAG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLLCLL*GTFLPK
Trigger: CTTAGGAAGGAATGTTCCCAATAGTAGACATAAAAG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCAAAGGGCTTCTGATTaGCTACATTTGAATCTAATG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLQRASD*LHLNLM
Trigger: CATTAGATTCAAATGTAGCAAATCAGAAGCCCTTTG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp CTGAGACAGGTGTGGAAACAGACTTCCTTTTGGCCATACAAAGTGATAAAGGACCCTGAAAAACTTGCATaGAAAGTCTCTTTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: LRQVWKQTSFWPYKVIKDPEKLA*KVSLGD
Trigger: ATCACCTAAAGAGACTTTCAATGCAAGTTTTTCAGG...GTCCTTTATCACTTTGTATGGCCAAAAGGAAGTCTGTTTCCACACCTGTCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCCTGAAAAACTTGCATaGAAAGTCTCTTTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLPEKLA*KVSLGD
Trigger: ATCACCTAAAGAGACTTTCAATGCAAGTTTTTCAGG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAAGACTTTTCTGGGATaGAAAGTCAGTATCACTGTA +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLKTFLG*KVSITV
Trigger: TACAGTGATACTGACTTTCAATCCCAGAAAAGTCTT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAGCTTGTCTGACATTTaGTATGATTCTTTGCCTCTA +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLSLSDI*YDSLPL
Trigger: TAGAGGCAAAGAATCATACAAAATGTCAGACAAGCT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTGCTTTACACTATTTTaGTTCTCCTCTGCAAGAACA +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLCFTLF*FSSART
Trigger: TGTTCTTGCAGAGGAGAACAAAAATAGTGTAAAGCA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp CCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGCCTGTGAACTGTGATTTGAAATaGGACCTAAGAGTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: PNFQLDLSLFLIIQHLPVNCDLK*DLRVLP
Trigger: GGGCAGGACTCTTAGGTCCAATTTCAAATCACAGTT...CACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp GTTGGGGTGGACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTAATAGAGTAGGTTCTTaGATCTTTTCATCACGTTCG +
Preference number: 5 (lower is better)
Translates to: VGVDHLGSFACSICISLFNRVGS*IFSSRS
Trigger: CGAACGTGATGAAAAGATCAAAGAACCTACTCTATT...AAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGAAATCCCACAAGTATTaGCAGATGAGACTGACTTAT +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLKSHKY*QMRLTY
Trigger: ATAAGTCAGTCTCATCTGCAAATACTTGTGGGATTT...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGTTTAGACAGAAATTCTaGACCAGGTGCGGTAAAATT +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLFRQKF*TRCGKI
Trigger: AATTTTACCGCACCTGGTCAAGAATTTCTGTCTAAA...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGGAAAGAATCCAAGTTaGGTATACCAGCGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYGKNPS*VYQRAG
Trigger: GCCTGCTCGCTGGTATACCAAACTTGGATTCTTTCC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATAAGCTCTGCACCATCTaGCAAAGCACGAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYKLCTI*QSTNLL
Trigger: CAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGCTT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCTTATCATTCAACATTaGCCTGTGATTATTCAAGGC +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLLIIQH*PVIIQG
Trigger: GCCTTGAATAATCACAGGCAAATGTTGAATGATAAG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTCCTTTTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCCTTATCATTCAACATTaGCCTGTGATTATTCAAGGC +
Preference number: 5 (lower is better)
Translates to: FLLFSRFHGLPNFQLDLSLIIQH*PVIIQG
Trigger: GCCTTGAATAATCACAGGCAAATGTTGAATGATAAG...GCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528762.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGCAACTGGATCTGAGCTaGTTTCTTATCATTCAACAT +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLQLDLS*FLIIQH
Trigger: ATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTG...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTGATAATATATCTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCGGTCGCCACTGGAGGTaGCTTGCAGCAATTAACATA +
Preference number: 5 (lower is better)
Translates to: LIIYLTIRRRHQKLVSCTGRHWR*LAAINI
Trigger: TATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACC...GGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAGATATATTATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470094.1
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp AGTATACCAATACGGAATCGGGCAAAACGATTTTTGCCCGATACACAAACGCTGGTTCTTCGTCAGCTATaGAATTACTTTCCAAAAGAG +
Preference number: 5 (lower is better)
Translates to: SIPIRNRAKRFLPDTQTLVLRQL*NYFPKE
Trigger: CTCTTTTGGAAAGTAATTCAATAGCTGACGAAGAAC...CAGCGTTTGTGTATCGGGCAAAAATCGTTTTGCCCGATTCCGTATTGGTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGAGTTTGAGACCAGCTaGGCCAACATGGTAAAACCC +
Preference number: 5 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYEFETS*ANMVKP
Trigger: GGGTTTTACCATGTTGGCCAAGCTGGTCTCAAACTC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTGCCAGTAAATTGTAACATTCGTCTGACAAATAGACGAAAGGGGCAAGTCCTGTTGTGTTTTCAGAAGTaGATTCCAACCCTCATGGAT +
Preference number: 5 (lower is better)
Translates to: LPVNCNIRLTNRRKGQVLLCFQK*IPTLMD
Trigger: ATCCATGAGGGTTGGAATCAACTTCTGAAAACACAA...CAGGACTTGCCCCTTTCGTCTATTTGTCAGACGAATGTTACAATTTACTGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665585.1
CDS TCA 90 bp GAAGTTCCAGATATTGCCTGCTTTACTGCAAGAATGCAGTCTGTATaGGATTCAAGATGCTGCTCTTCATCTCTCTTATTTACCACTGTT +
Preference number: 5 (lower is better)
Translates to: EVPDIACFTARMQSV*DSRCCSSSLLFTTV
Trigger: AACAGTGGTAAATAAGAGAGATGAAGAGCAGCATCTTGAATCTCATACAGACTGCATTCTTGCAGTAAAGCAGGCAATATCTGGAACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380152.8
ENST00000530893.6
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS TCA 90 bp TTAGTTGTGCGAAAGGGTACACAGGTAATCGGCTCTAAAGAAACATaGTGCATAAACAATCTTCGATCTTTTATTGTGCCATCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: LVVRKGTQVIGSKET*CINNLRSFIVPSGV
Trigger: CACTCCAGATGGCACAATAAAAGATCGAAGATTGTTTATGCATCATGTTTCTTTAGAGCCGATTACCTGTGTACCCTTTCGCACAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS CCA 90 bp TGGATATTAAACCTGCATTCTTCAAAGCTACAGAATTCTGTGTGGTaGTGGCTGGCCAGCTTCCATTATCAATTAAATTTGGACATAAGG +
Preference number: 5 (lower is better)
Translates to: WILNLHSSKLQNSVW*WLASFHYQLNLDIR
Trigger: CCTTATGTCCAAATTTAATTGATAATGGAAGCTGGCCAGCCACCACCACACAGAATTCTGTAGCTTTGAAGAATGCAGGTTTAATATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380152.8
ENST00000530893.6
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS CCA 90 bp CAAATGAGATTTAGACAGAAATTCTTGACCAGGTGCGGTAAAATTTaGATTCTGTATCTCTTGACGTTCCTTAGTTGTGCGAAAGGGTAC +
Preference number: 5 (lower is better)
Translates to: QMRFRQKFLTRCGKI*ILYLLTFLSCAKGY
Trigger: GTACCCTTTCGCACAACTAAGGAACGTCAAGAGATACAGAATCCAAATTTTACCGCACCTGGTCAAGAATTTCTGTCTAAATCTCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCGGCAGAGTCAGCCCTaGCTCTTTGAATATTATTGG +
Preference number: 5 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYRQSQP*LFEYYW
Trigger: CCAATAATATTCAAAGAGCAAGGGCTGACTCTGCCG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATTTCTTTTACAGGAGATaGGTACAGCGGCAGAGTCAG +
Preference number: 5 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYFFYRR*VQRQSQ
Trigger: CTGACTCTGCCGCTGTACCAATCTCCTGTAAAAGAA...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp GGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATTTGGACCCTTCACAAACTTaGGTGTATGAAACAAACTCC +
Preference number: 5 (lower is better)
Translates to: GLPNFQLDLSLFLIIQHLDPSQT*VYETNS
Trigger: GGAGTTTGTTTCATACACCAAAGTTTGTGAAGGGTC...CAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp ATAAGGCTTCTAGTCTCTTTTGTTGGGCCTCCACATATTTTGCTGCTTCCTTTTTTTCAGAAATATGTTTaGGTGTCTGACGACCCTTCA +
Preference number: 5 (lower is better)
Translates to: IRLLVSFVGPPHILLLPFFQKYV*VSDDPS
Trigger: TGAAGGGTCGTCAGACACCAAAACATATTTCTGAAA...AAAAGGAAGCAGCAAAATATGTGGAGGCCCAACAAAAGAGACTAGAAGCCTTAT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp TTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTCAAAGGGCTTCTGATTaGCTACATTTGAATCTAATG +
Preference number: 5 (lower is better)
Translates to: LFSRFHGLPNFQLDLSLFQRASD*LHLNLM
Trigger: CATTAGATTCAAATGTAGCAAATCAGAAGCCCTTTG...AAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp TTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTTGCTTTACACTATTTTaGTTCTCCTCTGCAAGAACA +
Preference number: 5 (lower is better)
Translates to: LFSRFHGLPNFQLDLSLFCFTLF*FSSART
Trigger: TGTTCTTGCAGAGGAGAACAAAAATAGTGTAAAGCA...AAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp TTGTTCAGCAGATTCCATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTAAATCCCACAAGTATTaGCAGATGAGACTGACTTAT +
Preference number: 5 (lower is better)
Translates to: LFSRFHGLPNFQLDLSLFKSHKY*QMRLTY
Trigger: ATAAGTCAGTCTCATCTGCAAATACTTGTGGGATTT...AAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614259.2
CDS-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGGTGGAACAAAGACTTaGGTTGGTCTGCCTGTAGTA +
Preference number: 5 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYGGTKT*VGLPVV
Trigger: TACTACAGGCAGACCAACCAAAGTCTTTGTTCCACC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp CATGGCCTTCCTAATTTCCAACTGGATCTGAGCTTGTTTCTTATCATTCAACATCTGTGGAAAGACGCGTaGCCTTTGTTTCTTCTTAAT +
Preference number: 5 (lower is better)
Translates to: HGLPNFQLDLSLFLIIQHLWKDA*PLFLLN
Trigger: ATTAAGAAGAAACAAAGGCAACGCGTCTTTCCACAG...ATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGGAAGGCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp GACCACTTGGGATCATTTGCATGCAGTATATGCATAAGCTTGTTTTCTGCTTCAAATAATGGCCACTTTTaGGGTATCTGCACTACTAGT +
Preference number: 5 (lower is better)
Translates to: DHLGSFACSICISLFSASNNGHF*GICTTS
Trigger: ACTAGTAGTGCAGATACCCAAAAAGTGGCCATTATT...TGAAGCAGAAAACAAGCTTATGCATATACTGCATGCAAATGATCCCAAGTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGGGCCTCCACATATTTaGCTGCTTCCTTTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYGPPHI*LLPFLP
Trigger: AGGAAGAAAAGGAAGCAGCAAAATATGTGGAGGCCC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTGATAATATATCTCACAATTAGGAGAAGACATCAGAAGCTTGTTTCCTGTACCGGGCCTCCACATATTTaGCTGCTTCCTTTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LIIYLTIRRRHQKLVSCTGPPHI*LLPFLP
Trigger: AGGAAGAAAAGGAAGCAGCAAAATATGTGGAGGCCC...GGTACAGGAAACAAGCTTCTGATGTCTTCTCCTAATTGTGAGATATATTATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614259.2
ENST00000665585.1
CDS-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATCACGAACTTGCTGTCTaGTTAGTGCACGTGATGGTA +
Preference number: 5 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYHELAV*LVHVMV
Trigger: TACCATCACGTGCACTAACAAGACAGCAAGTTCGTG...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATGCCACTGGAGGTTGCTaGCAGCAATTAACATATGAG +
Preference number: 5 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYATGGC*QQLTYE
Trigger: CTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGC...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS-3UTR CAA 90 bp TTCATATTCATCCTGACTTTTGAACAGGATGGAACTATAGCAGAACCAACATATATGGGTGTTTCGTATTaGGTGCCACAACTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: FIFILTFEQDGTIAEPTYMGVSY*VPQLLG
Trigger: ACCAAGGAGTTGTGGCACCAAATACGAAACACCCAT...ATATGTTGGTTCTGCTATAGTTCCATCCTGTTCAAAAGTCAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380152.8
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS TCA 90 bp ACAACTTCCTTGGAGATTTTGTCACTTCCACTCTCAAAGGGCTTCTaGTTTGCTACATTTGAATCTAATGGATCAGTATCATTTGGTTCC +
Preference number: 5 (lower is better)
Translates to: TTSLEILSLPLSKGF*FATFESNGSVSFGS
Trigger: GGAACCAAATGATACTGATCCATTAGATTCAAATGTAGCAAATCAGAAGCCCTTTGAGAGTGGAAGTGACAAAATCTCCAAGGAAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380152.8
ENST00000530893.6
ENST00000544455.6
ENST00000614259.2
ENST00000680887.1
CDS CCA 90 bp ATATTAAACCTGCATTCTTCAAAGCTACAGAATTCTGTGTGGTGGTaGCTGGCCAGCTTCCATTATCAATTAAATTTGGACATAAGGAGT +
Preference number: 5 (lower is better)
Translates to: ILNLHSSKLQNSVWW*LASFHYQLNLDIRS
Trigger: ACTCCTTATGTCCAAATTTAATTGATAATGGAAGCTGGCCAGCCACCACCACACAGAATTCTGTAGCTTTGAAGAATGCAGGTTTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380152.8
ENST00000530893.6
ENST00000544455.6
ENST00