RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRCA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000012048

Ensembl transcript IDs: ENST00000352993.7, ENST00000354071.7, ENST00000357654.9, ENST00000461221.5, ENST00000461798.5, ENST00000468300.5, ENST00000470026.5, ENST00000471181.7, ENST00000473961.5, ENST00000476777.5, ENST00000477152.5, ENST00000478531.5, ENST00000484087.5, ENST00000487825.5, ENST00000489037.1, ENST00000491747.6, ENST00000492859.5, ENST00000493795.5, ENST00000493919.5, ENST00000494123.5, ENST00000497488.1, ENST00000591849.5, ENST00000621897.1, ENST00000634433.1, ENST00000642945.1, ENST00000644379.1, ENST00000644555.1, ENST00000652672.1

Found 1104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTaGCTCACACATCTGCCCAATTGCATGGAAGCCATTGTCCTCTGT +
Preference number: 1 (lower is better)
Translates to: VECYTVQHPLSGHHR*LTHLPNCMEAIVLC
Trigger: ACAGAGGACAATGGCTTCCATGCAATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR TCA 90 bp TTTGTGCCACATGGCTCCACATGCAAGTTTGAAACAGAACTACCCTaGTACTTTTCTGGATGCCTCTCAGCTGCACGCTTCTCAGTGGTG +
Preference number: 1 (lower is better)
Translates to: FVPHGSTCKFETELP*YFSGCLSAARFSVV
Trigger: CACCACTGAGAAGCGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR TCA 90 bp ATTCTTCTGGGGTCAGGCCAGACACCACCATGGACATTCTTTTGTTaGCCCTTTCTGTTGAAGCTGTCAATTCTGGCTTCTCCCTGCTCA +
Preference number: 1 (lower is better)
Translates to: ILLGSGQTPPWTFFC*PFLLKLSILASPCS
Trigger: TGAGCAGGGAGAAGCCAGAATTGACAGCTTCAACAGAAAGGGTCAACAAAAGAATGTCCATGGTGGTGTCTGGCCTGACCCCAGAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR TCA 90 bp GAGGCCAAGCCACTCTGTGCTTCCAGCCCTAAGCCAACAACAGCCTaGATAGAAAGAATAGGGCTGATAAATAATGAATCAGCATCTTGC +
Preference number: 1 (lower is better)
Translates to: EAKPLCASSPKPTTA*IERIGLINNESASC
Trigger: GCAAGATGCTGATTCATTATTTATCAGCCCTATTCTTTCTATTCAGGCTGTTGTTGGCTTAGGGCTGGAAGCACAGAGTGGCTTGGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR TCA 90 bp GAAACCAATTCCTTGTCACTCAGACCAACTCCCTGGCTTTCAGACTaGTGCCTCATTTGTTTGGAAGAACCAATCAAGAAAGGATCCTGG +
Preference number: 1 (lower is better)
Translates to: ETNSLSLRPTPWLSD*CLICLEEPIKKGSW
Trigger: CCAGGATCCTTTCTTGATTGGTTCTTCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGGAGTTGGTCTGAGTGACAAGGAATTGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR TCA 90 bp CTCACACTTTCTTCCATTGCATTATACCCAGCAGTATCAGTAGTATaGGCAGCAGCTGGACTCTGGGCAGATTCTGCAACTTTCAATTGG +
Preference number: 1 (lower is better)
Translates to: LTLSSIALYPAVSVV*AAAGLWADSATFNW
Trigger: CCAATTGAAAGTTGCAGAATCTGCCCAGAGTCCAGCTGCTGCTCATACTACTGATACTGCTGGGTATAATGCAATGGAAGAAAGTGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CCA 90 bp CTGTTGCTCCTCCACATCAACAACCTTAATGAGCTCCTCTTGAGATaGGTAGTTTCTATTCTGAAGACTCCCAGAGCAACTGTGCATGTA +
Preference number: 1 (lower is better)
Translates to: LLLLHINNLNELLLR*VVSILKTPRATVHV
Trigger: TACATGCACAGTTGCTCTGGGAGTCTTCAGAATAGAAACTACCCATCTCAAGAGGAGCTCATTAAGGTTGTTGATGTGGAGGAGCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR GCA 90 bp GCCTCAGAATTTCCTCCCCAATGTTCCACTCCAACATTTGAGAACTaGCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAG +
Preference number: 1 (lower is better)
Translates to: ASEFPPQCSTPTFEN*PRTILTLSHIIDPK
Trigger: CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGGAGTGGAACATTGGGGAGGAAATTCTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR CCA 90 bp TTCCATTGCATTATACCCAGCAGTATCAGTAGTATGAGCAGCAGCTaGACTCTGGGCAGATTCTGCAACTTTCAATTGGGGAACTTTCAA +
Preference number: 1 (lower is better)
Translates to: FHCIIPSSISSMSSS*TLGRFCNFQLGNFQ
Trigger: TTGAAAGTTCCCCAATTGAAAGTTGCAGAATCTGCCCAGAGTCCAGCTGCTGCTCATACTACTGATACTGCTGGGTATAATGCAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR GCA 90 bp ATAAACTGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTaGCACATGGCTCCACATGCAAGTTTGAAACAGAACTACCCTGAT +
Preference number: 1 (lower is better)
Translates to: INCCSHAVMSWHEYL*HMAPHASLKQNYPD
Trigger: ATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR CCA 90 bp CTCTGGGAAAGTATCGCTGTCATGTCTTTTACTTGTCTGTTCATTTaGCTTGTTACTCTTCTTGGCTCCAGTTGCAGGTTCTTTACCTTC +
Preference number: 1 (lower is better)
Translates to: LWESIAVMSFTCLFI*LVTLLGSSCRFFTF
Trigger: GAAGGTAAAGAACCTGCAACTGGAGCCAAGAAGAGTAACAAGCCAAATGAACAGACAAGTAAAAGACATGACAGCGATACTTTCCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR TCA 90 bp AATACCTGCCTCAGAATTTCCTCCCCAATGTTCCACTCCAACATTTaGGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGA +
Preference number: 1 (lower is better)
Translates to: NTCLRISSPMFHSNI*ELPKDYSDFKSHNR
Trigger: TCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGGAGTGGAACATTGGGGAGGAAATTCTGAGGCAGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR TCA 90 bp TTCTTGATTATTTTCTTCCAAGCCCGTTCCTCTTTCTTCATCATCTaGAACCAATTCCTTGTCACTCAGACCAACTCCCTGGCTTTCAGA +
Preference number: 1 (lower is better)
Translates to: FLIIFFQARSSFFII*NQFLVTQTNSLAFR
Trigger: TCTGAAAGCCAGGGAGTTGGTCTGAGTGACAAGGAATTGGTTTCAGATGATGAAGAAAGAGGAACGGGCTTGGAAGAAAATAATCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR TCA 90 bp TATCATTCTTACATAAAGGACACTGTGAAGGCCCTTTCTTCTGGTTaGGAAGTTTCAGCATGCAAAATAGTCCCAGCTACTTGGGAGACT +
Preference number: 1 (lower is better)
Translates to: YHSYIKDTVKALSSG*EVSACKIVPATWET
Trigger: AGTCTCCCAAGTAGCTGGGACTATTTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTCACAGTGTCCTTTATGTAAGAATGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492859.5
3UTR CCA 90 bp TACCCTGATACTTTTCTGGATGCCTCTCAGCTGCACGCTTCTCAGTaGTGTTCAAATCATTATTACTGGGTTGATGATGTTCAGTATTTG +
Preference number: 1 (lower is better)
Translates to: YPDTFLDASQLHASQ*CSNHYYWVDDVQYL
Trigger: CAAATACTGAACATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR CCA 90 bp TCTGCAGACACCTCAAACTTGTCAGCAGAAAGGCCTTCTGGATTCTaGCTTATAGGGTATTCACTACTTTTCTGTGAAGTTAATACTGCT +
Preference number: 1 (lower is better)
Translates to: SADTSNLSAERPSGF*LIGYSLLFCEVNTA
Trigger: AGCAGTATTAACTTCACAGAAAAGTAGTGAATACCCTATAAGCCAGAATCCAGAAGGCCTTTCTGCTGACAAGTTTGAGGTGTCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR TCA 90 bp TTAGTGAGTAATAAACTGCTGTTCTCATGCTGTAATGAGCTGGCATaGGTATTTGTGCCACATGGCTCCACATGCAAGTTTGAAACAGAA +
Preference number: 1 (lower is better)
Translates to: LVSNKLLFSCCNELA*VFVPHGSTCKFETE
Trigger: TTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTATTACTCACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR TCA 90 bp CAATTAGGTGGGCTTAGATTTCTACTGACTACTAGTTCAAGCGCATaGATATGCCTGGTAGAAGACTTCCTCCTCAGCCTATTCTTTTTA +
Preference number: 1 (lower is better)
Translates to: QLGGLRFLLTTSSSA*ICLVEDFLLSLFFL
Trigger: TAAAAAGAATAGGCTGAGGAGGAAGTCTTCTACCAGGCATATTCATGCGCTTGAACTAGTAGTCAGTAGAAATCTAAGCCCACCTAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR TCA 90 bp CCTCCTTTGATACTACATTTGGCATTATCAACTGGCTTATCTTTCTaGCCAACCACAGGAAAGCCTGCAGTGATATTAACTGTCTGTACA +
Preference number: 1 (lower is better)
Translates to: PPLILHLALSTGLSF*PTTGKPAVILTVCT
Trigger: TGTACAGACAGTTAATATCACTGCAGGCTTTCCTGTGGTTGGTCAGAAAGATAAGCCAGTTGATAATGCCAAATGTAGTATCAAAGGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR TCA 90 bp CTGGGTGTTTGTATTTGCAGTCAAGTCTTCCAATTCACTGCACTGTaGAGAAAACAAGCTAGCAGAACATTTTGTTTCCTCACTAAGGTG +
Preference number: 1 (lower is better)
Translates to: LGVCICSQVFQFTAL*RKQASRTFCFLTKV
Trigger: CACCTTAGTGAGGAAACAAAATGTTCTGCTAGCTTGTTTTCTTCACAGTGCAGTGAATTGGAAGACTTGACTGCAAATACAAACACCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR GCA 90 bp CCAGGTACCAATGAAATACTGCTACTCTCTACAGATCTTTCAGTTTaGAAAACCCTTTCTCCACTTAACATGAGATCTTTGGGGTCTTCA +
Preference number: 1 (lower is better)
Translates to: PGTNEILLLSTDLSV*KTLSPLNMRSLGSS
Trigger: TGAAGACCCCAAAGATCTCATGTTAAGTGGAGAAAGGGTTTTGCAAACTGAAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR GCA 90 bp GGCATTATCAACTGGCTTATCTTTCTGACCAACCACAGGAAAGCCTaGAGTGATATTAACTGTCTGTACAGGCTTGATATTAGACTCATT +
Preference number: 1 (lower is better)
Translates to: GIINWLIFLTNHRKA*SDINCLYRLDIRLI
Trigger: AATGAGTCTAATATCAAGCCTGTACAGACAGTTAATATCACTGCAGGCTTTCCTGTGGTTGGTCAGAAAGATAAGCCAGTTGATAATGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CCA 90 bp GCCTCTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTaGGTTGATGATGTTCAGTATTTGTTACATCCGTCTCAGAAAATT +
Preference number: 1 (lower is better)
Translates to: ASQLHASQWCSNHYY*VDDVQYLLHPSQKI
Trigger: AATTTTCTGAGACGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR TCA 90 bp TTCCTGGATTTGAAAACGGAGCAAATGACTGGCGCTTTGAAACCTTaGATGTATTCTGCAAATACTGAGCATCAAGTTCACTTTCTTCCA +
Preference number: 1 (lower is better)
Translates to: FLDLKTEQMTGALKP*MYSANTEHQVHFLP
Trigger: TGGAAGAAAGTGAACTTGATGCTCAGTATTTGCAGAATACATTCAAGGTTTCAAAGCGCCAGTCATTTGCTCCGTTTTCAAATCCAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR TCA 90 bp AGCATAGCATTCAATTTTGGCCCTCTGTTTCTACCTAGTTCTGCTTaGATGTTTTCATCACTGGAACCTATTTCATTAATACTGGAGCCC +
Preference number: 1 (lower is better)
Translates to: SIAFNFGPLFLPSSA*MFSSLEPISLILEP
Trigger: GGGCTCCAGTATTAATGAAATAGGTTCCAGTGATGAAAACATTCAAGCAGAACTAGGTAGAAACAGAGGGCCAAAATTGAATGCTATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR TCA 90 bp TTCTTAGACAGACACTCGGTAGCAACGGTGCTATGCCTAGTAGACTaGGAAGGTATATTGTTTACTTTACCAAATAACAAGTGTTGGAAG +
Preference number: 1 (lower is better)
Translates to: FLDRHSVATVLCLVD*EGILFTLPNNKCWK
Trigger: CTTCCAACACTTGTTATTTGGTAAAGTAAACAATATACCTTCTCAGTCTACTAGGCATAGCACCGTTGCTACCGAGTGTCTGTCTAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR TCA 90 bp CCACAGGTGCCTCACACATCTGCCCAATTGCATGGAAGCCATTGTCCTCTGTCCCTGTGGGCATGTTGGTaGAGGGCCCATAGCAACAGA +
Preference number: 2 (lower is better)
Translates to: PQVPHTSAQLHGSHCPLSLWACW*RAHSNR
Trigger: TCTGTTGCTATGGGCCCTTCACCAACATGCCCACAG...GGACAGAGGACAATGGCTTCCATGCAATTGGGCAGATGTGTGAGGCACCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CCA 90 bp TGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCCTCACACATCTGTTCCGTCAAATCGTGTaGCCCAGACTCTTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: CYTVQHPLSGHHRCLTHLFRQIV*PRLFQL
Trigger: CAGCTGGAAGAGTCTGGGCCACACGATTTGACGGAA...CAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR TCA 90 bp CCACAGGTGCCTCACACATCTGCCCAATTGCATGGAAGCCATTGTCCTCTGTCCATAAAATCCTCAGGATaGAGGCCTGATGTAGGTCTC +
Preference number: 2 (lower is better)
Translates to: PQVPHTSAQLHGSHCPLSIKSSG*RPDVGL
Trigger: GAGACCTACATCAGGCCTTCATCCTGAGGATTTTAT...GGACAGAGGACAATGGCTTCCATGCAATTGGGCAGATGTGTGAGGCACCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR GCA 90 bp CCACAGGTGCCTCACACATCTGCCCAATTGCATGGAAGCCATTGTCCTCTGTCCCTTGGGGTTTTCAAATaGTGCACACTGACTCACACA +
Preference number: 2 (lower is better)
Translates to: PQVPHTSAQLHGSHCPLSLGVFK*CTLTHT
Trigger: TGTGTGAGTCAGTGTGCAGCATTTGAAAACCCCAAG...GGACAGAGGACAATGGCTTCCATGCAATTGGGCAGATGTGTGAGGCACCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CCA 90 bp TTACTTCCAGCCCATCTGTTATGTTGGCTCCTTGCTAAGCCAGGCTGTTTGCTTGCCCATCTGTTATGTTaGCTCCTTGCTAAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: LLPAHLLCWLLAKPGCLLAHLLC*LLAKPG
Trigger: GCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGC...AAGCAAACAGCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGCTGGAAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR CAA 90 bp GTAAGATGTTTCCGTCAAATCGTGTGGCCCAGACTCTTCCAGCTGTaGCTCCTCCACATCAACAACCTTAATGAGCTCCTCTTGAGATGG +
Preference number: 2 (lower is better)
Translates to: VRCFRQIVWPRLFQL*LLHINNLNELLLRW
Trigger: CCATCTCAAGAGGAGCTCATTAAGGTTGTTGATGTGGAGGAGCAACAGCTGGAAGAGTCTGGGCCACACGATTTGACGGAAACATCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CAA 90 bp AATTCTTCTGGGGTCAGGCCAGACACCACCATGGACATTCTTTTGTaGACCCTTTCTGTTGAAGCTGTCAATTCTGGCTTCTCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: NSSGVRPDTTMDILL*TLSVEAVNSGFSLL
Trigger: GAGCAGGGAGAAGCCAGAATTGACAGCTTCAACAGAAAGGGTCAACAAAAGAATGTCCATGGTGGTGTCTGGCCTGACCCCAGAAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR TCA 90 bp TCCAACACCCACTCTCGGGTCACCACAGGTGCCTCACACATCTGCCCAATTGCAAGCTCTTCAACAAGTTaGCTAAATCTCGTACTTTCT +
Preference number: 2 (lower is better)
Translates to: SNTHSRVTTGASHICPIASSSTS*LNLVLS
Trigger: AGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCT...TGCAATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CCA 90 bp TGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTGCCACATGGCTCCAACCCTGATACTTTTCTaGATGCCTCTCAGCTGCACG +
Preference number: 2 (lower is better)
Translates to: CCSHAVMSWHEYLCHMAPTLILF*MPLSCT
Trigger: CGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGT...TGGAGCCATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CCA 90 bp TCCAACACCCACTCTCGGGTCACCACAGGTGCCTCACACATCTGCCCAATTGCATTTGGCATTATCAACTaGCTTATCTTTCTGACCAAC +
Preference number: 2 (lower is better)
Translates to: SNTHSRVTTGASHICPIAFGIIN*LIFLTN
Trigger: GTTGGTCAGAAAGATAAGCCAGTTGATAATGCCAAA...TGCAATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CAA 90 bp ACACAGGGTTTTAGAGAAGTAAACTTAGGGAAACCAGCTATTCTCTaGAGGCCAAGCCACTCTGTGCTTCCAGCCCTAAGCCAACAACAG +
Preference number: 2 (lower is better)
Translates to: TQGFREVNLGKPAIL*RPSHSVLPALSQQQ
Trigger: CTGTTGTTGGCTTAGGGCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCTCTAAAACCCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAAGCCAACAACAGCCTaGATAGAAAGAATAGGGCTG +
Preference number: 2 (lower is better)
Translates to: KLRETSYSLEAKPLCASSKPTTA*IERIGL
Trigger: CAGCCCTATTCTTTCTATTCAGGCTGTTGTTGGCTT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR CCA 90 bp TTACTTCCAGCCCATCTGTTATGTTGGCTCCTTGCTAAGCCAGGCTGTTTGCTTCCAAGGTTAGAGAGTTaGACACTGAGACTGGTTTCC +
Preference number: 2 (lower is better)
Translates to: LLPAHLLCWLLAKPGCLLPRLES*TLRLVS
Trigger: GGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGG...AAGCAAACAGCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGCTGGAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CCA 90 bp AAGCCATTGTCCTCTGTCCAGGCATCTGGCTGCACAACCACAATTGGGTGGACAACTTGTCTGTTCATTTaGCTTGTTACTCTTCTTGGC +
Preference number: 2 (lower is better)
Translates to: KPLSSVQASGCTTTIGWTTCLFI*LVTLLG
Trigger: GCCAAGAAGAGTAACAAGCCAAATGAACAGACAAGT...TGTCCACCCAATTGTGGTTGTGCAGCCAGATGCCTGGACAGAGGACAATGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CCA 90 bp TTCTGTGCTGGGAGTCCGCCTATCATTACATGTTTCCTTACTTCCAGCCCATCTATAGTCCCAGCTACTTaGGAGACTGAGGTGATAGGA +
Preference number: 2 (lower is better)
Translates to: FCAGSPPIITCFLTSSPSIVPAT*ETEVIG
Trigger: TCCTATCACCTCAGTCTCCCAAGTAGCTGGGACTAT...AGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492859.5
3UTR CAA 90 bp ATGAGCTGGCATGAGTATTTGTGCCACATGGCTCCACATGCAAGTTaGAAACAGAACTACCCTGATACTTTTCTGGATGCCTCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: MSWHEYLCHMAPHAS*KQNYPDTFLDASQL
Trigger: CAGCTGAGAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCAGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR CAA 90 bp AAATGTCACTCTGAGAGGATAGCCCTGAGCAGTCTTCAGAGACGCTaGTTTCACTCTCACACCCAGATGCTGCTTCACCTAAGTTTGAAT +
Preference number: 2 (lower is better)
Translates to: KCHSERIALSSLQRR*FHSHTQMLLHLSLN
Trigger: ATTCAAACTTAGGTGAAGCAGCATCTGGGTGTGAGAGTGAAACAAGCGTCTCTGAAGACTGCTCAGGGCTATCCTCTCAGAGTGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CAA 90 bp TTCCAGCTGTTGCTCCTCCACATCAACAACCTTAATGAGCTCCTCTaGAGATGGGTAGTTTCTATTCTGAAGACTCCCAGAGCAACTGTG +
Preference number: 2 (lower is better)
Translates to: FQLLLLHINNLNELL*RWVVSILKTPRATV
Trigger: CACAGTTGCTCTGGGAGTCTTCAGAATAGAAACTACCCATCTCAAGAGGAGCTCATTAAGGTTGTTGATGTGGAGGAGCAACAGCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CAA 90 bp CCTGAAGATCTTTCTGTCCTGGGATTCTCTTGCTCGCTTTGGACCTaGGTGGTTTCTTCCATTGACCACATCTCCTCTGACTTCAAAATC +
Preference number: 2 (lower is better)
Translates to: PEDLSVLGFSCSLWT*VVSSIDHISSDFKI
Trigger: GATTTTGAAGTCAGAGGAGATGTGGTCAATGGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACAGAAAGATCTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR TCA 90 bp AGGTTGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGGCCCTTTCTTCTGGTTaGGAAGTTTCAGCATGCAAA +
Preference number: 2 (lower is better)
Translates to: RLYPLLCPQSSHSSKVREALSSG*EVSACK
Trigger: TTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGC...CTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR GCA 90 bp TTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTCTGAGACTGGTTTCCTaGAAGGAAGGATTTTCGGGT +
Preference number: 2 (lower is better)
Translates to: FPARKDFRVHSVEVFWHGLRLVS*KEGFSG
Trigger: ACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAG...ACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR GCA 90 bp TCTTCAGAAGGATCAGATTCAGGGTCATCAGAGAAGAGGCTGATTCCAGATTCCCTCCCAGAGCAACTGTaGATGTACCACCTATCATCT +
Preference number: 2 (lower is better)
Translates to: SSEGSDSGSSEKRLIPDSLPEQL*MYHLSS
Trigger: AGATGATAGGTGGTACATGCACAGTTGCTCTGGGAG...GGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CCA 90 bp GTTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTCTGTAGAAGTCTTTTaGCACGGTTTCTGTAGCCCA +
Preference number: 2 (lower is better)
Translates to: VSCKEGFSGSLCRSLLARSVEVF*HGFCSP
Trigger: TGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGA...CCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CCA 90 bp TTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTCCAAGGTTAGAGAGTTaGACACTGAGACTGGTTTCC +
Preference number: 2 (lower is better)
Translates to: FPARKDFRVHSVEVFWHGPRLES*TLRLVS
Trigger: GGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGG...ACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR TCA 90 bp TTACTTCCAGCCCATCTGTTATGTTGGCTCCTTGCTAAGCCAGGCTGTTTGCTTCTCCACATGCAAGTTTaGAACAGAACTACCCTGATA +
Preference number: 2 (lower is better)
Translates to: LLPAHLLCWLLAKPGCLLLHMQV*NRTTLI
Trigger: TATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAG...AAGCAAACAGCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGCTGGAAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR GCA 90 bp ATGGCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGGATGCCTGGCATGAGTATTTGTaGCACATGGCTCCACATGCA +
Preference number: 2 (lower is better)
Translates to: MAPHASLKQNYPDTFLDAWHEYL*HMAPHA
Trigger: TGCATGTGGAGCCATGTGGCACAAATACTCATGCCA...GGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CCA 90 bp CTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGCCAAGGTTAGAGAGTTaGACACTGAGACTGGTTTCC +
Preference number: 2 (lower is better)
Translates to: LSCTLLSGVQIIITGLMMPRLES*TLRLVS
Trigger: GGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGG...CATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR CAA 90 bp CTTGTCACTCAGACCAACTCCCTGGCTTTCAGACTGATGCCTCATTaGTTTGGAAGAACCAATCAAGAAAGGATCCTGGGTGTTTGTATT +
Preference number: 2 (lower is better)
Translates to: LVTQTNSLAFRLMPH*FGRTNQERILGVCI
Trigger: AATACAAACACCCAGGATCCTTTCTTGATTGGTTCTTCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGGAGTTGGTCTGAGTGACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAACCAGCTATTCTCTTaGGGCCAAGCCACTCTGTGC +
Preference number: 2 (lower is better)
Translates to: PTFENCPRTILTLSHIIDNQLFS*GQATLC
Trigger: GCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR TCA 90 bp ATTCAGACTCCCCATCATGTGAGTCATCAGAACCTAACAGTTCATCACTTCTGGTCATCCCTGGTTCCTTaGGGGGTGATTTGTAACAAT +
Preference number: 2 (lower is better)
Translates to: IQTPHHVSHQNLTVHHFWSSLVP*GVICNN
Trigger: ATTGTTACAAATCACCCCTCAAGGAACCAGGGATGA...CCAGAAGTGATGAACTGTTAGGTTCTGATGACTCACATGATGGGGAGTCTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
3UTR-3UTR TCA 90 bp GCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGGATGCCTCTGAAACAGAACTACCCTaGTACTTTTCTGGATGCCTC +
Preference number: 2 (lower is better)
Translates to: APHASLKQNYPDTFLDASETELP*YFSGCL
Trigger: GAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTC...AGAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR GCA 90 bp TCTTCAGAAGGATCAGATTCAGGGTCATCAGAGAAGAGGCTGATTCCAGATTCCGGGGTTTTCAAATGCTaGACACTGACTCACACATTT +
Preference number: 2 (lower is better)
Translates to: SSEGSDSGSSEKRLIPDSGVFKC*TLTHTF
Trigger: AAATGTGTGAGTCAGTGTGCAGCATTTGAAAACCCC...GGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR GCA 90 bp TCTTCAGAAGGATCAGATTCAGGGTCATCAGAGAAGAGGCTGATTCCAGATTCCACTGGTAGAACTATCTaGAGACACCTCAAACTTGTC +
Preference number: 2 (lower is better)
Translates to: SSEGSDSGSSEKRLIPDSTGRTI*RHLKLV
Trigger: GACAAGTTTGAGGTGTCTGCAGATAGTTCTACCAGT...GGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAGCATCTTGCTCAATTaGTGGCGTTTAAATGGTTTT +
Preference number: 2 (lower is better)
Translates to: KLRETSYSLEAKPLCASSSILLN*WRLNGF
Trigger: AAAACCATTTAAACGCCACCAATTGAGCAAGATGCT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR CCA 90 bp AGTTTCTGCTTATTCCATTCTTTTCTCTCACACAGGGGATCAGCATTCAGATCTACCCTGATACTTTTCTaGATGCCTCTCAGCTGCACG +
Preference number: 2 (lower is better)
Translates to: SFCLFHSFLSHRGSAFRSTLILF*MPLSCT
Trigger: CGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGT...AGATCTGAATGCTGATCCCCTGTGTGAGAGAAAAGAATGGAATAAGCAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
3UTR-3UTR CCA 90 bp TCTTCAGAAGGATCAGATTCAGGGTCATCAGAGAAGAGGCTGATTCCAGATTCCAACGGAGCAAATGACTaGCGCTTTGAAACCTTGAAT +
Preference number: 2 (lower is better)
Translates to: SSEGSDSGSSEKRLIPDSNGAND*RFETLN
Trigger: ATTCAAGGTTTCAAAGCGCCAGTCATTTGCTCCGTT...GGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CAA 90 bp AGAAGAATCAGATCCCAATTCAATGTAGACAGACGTCTTTTGAGGTaGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: RRIRSQFNVDRRLLR*YPLLCPQSSHSSKV
Trigger: AACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAATTGGGATCTGATTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR CAA 90 bp ATCTTCAGAAGAATCAGATCCCAATTCAATGTAGACAGACGTCTTTaGAGGTTGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCC +
Preference number: 2 (lower is better)
Translates to: IFRRIRSQFNVDRRL*RLYPLLCPQSSHSS
Trigger: GGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAATTGGGATCTGATTCTTCTGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR CAA 90 bp GTAATAAACTGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTaGTGCCACATGGCTCCACATGCAAGTTTGAAACAGAACTACCCT +
Preference number: 2 (lower is better)
Translates to: VINCCSHAVMSWHEY*CHMAPHASLKQNYP
Trigger: AGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR CAA 90 bp GCTCTGGGAAAGTATCGCTGTCATGTCTTTTACTTGTCTGTTCATTaGGCTTGTTACTCTTCTTGGCTCCAGTTGCAGGTTCTTTACCTT +
Preference number: 2 (lower is better)
Translates to: ALGKYRCHVFYLSVH*ACYSSWLQLQVLYL
Trigger: AAGGTAAAGAACCTGCAACTGGAGCCAAGAAGAGTAACAAGCCAAATGAACAGACAAGTAAAAGACATGACAGCGATACTTTCCCAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR TCA 90 bp GTTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGAGCTCTTCAACAAGTTaGCTAAATCTCGTACTTTCT +
Preference number: 2 (lower is better)
Translates to: VSCKEGFSGSLCRSLLARSSSTS*LNLVLS
Trigger: AGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCT...CCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR TCA 90 bp TGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTGCCACATGGCTCCAAAACCTGTGTCAAGCTaGAAAGCACAAATGATTTTC +
Preference number: 2 (lower is better)
Translates to: CCSHAVMSWHEYLCHMAPKPVSS*KAQMIF
Trigger: GAAAATCATTTGTGCTTTTCAGCTTGACACAGGTTT...TGGAGCCATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR TCA 90 bp ATAAACTGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTGCCACATGGAAACAGAACTACCCTaGTACTTTTCTGGATGCCTC +
Preference number: 2 (lower is better)
Translates to: INCCSHAVMSWHEYLCHMETELP*YFSGCL
Trigger: GAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTC...CATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR TCA 90 bp TCTGCAACTTTCAATTGGGGAACTTTCAATGCAGAGGTTGAAGATGGTATGTTGTGTAATGAGCTGGCATaGGTATTTGTGCCACATGGC +
Preference number: 2 (lower is better)
Translates to: SATFNWGTFNAEVEDGMLCNELA*VFVPHG
Trigger: GCCATGTGGCACAAATACTCATGCCAGCTCATTACA...CAACATACCATCTTCAACCTCTGCATTGAAAGTTCCCCAATTGAAAGTTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR TCA 90 bp CAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGTTGCCCTTTCTTCTGGTTaGGAAGTTTCAGCATGCAAA +
Preference number: 2 (lower is better)
Translates to: QLHASQWCSNHYYWVDDVALSSG*EVSACK
Trigger: TTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGC...AACATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR GCA 90 bp TGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTGCCACATGGCTCCACACACTGCAATAAGTTaGCTTATTAACGGTATCTTC +
Preference number: 2 (lower is better)
Translates to: CCSHAVMSWHEYLCHMAPHTAIS*LINGIF
Trigger: GAAGATACCGTTAATAAGGCAACTTATTGCAGTGTG...TGGAGCCATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR GCA 90 bp TTCATTCTGTCTTTAGTGAGTAATAAACTGCTGTTCTCATGCTGTAATGAGCTGTGGATGCCTCTCAGCTaGACGCTTCTCAGTGGTGTT +
Preference number: 2 (lower is better)
Translates to: FILSLVSNKLLFSCCNELWMPLS*TLLSGV
Trigger: AACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCA...CAGCTCATTACAGCATGAGAACAGCAGTTTATTACTCACTAAAGACAGAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR GCA 90 bp CTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGCCACATGGCTCCACATaGAAGTTTGAAACAGAACTA +
Preference number: 2 (lower is better)
Translates to: LSCTLLSGVQIIITGLMMPHGST*KFETEL
Trigger: TAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGG...CATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CCA 90 bp ATAAACTGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTGCCACATGGAAGGCCCTTTCTTCTaGTTGAGAAGTTTCAGCATG +
Preference number: 2 (lower is better)
Translates to: INCCSHAVMSWHEYLCHMEGPFF*LRSFSM
Trigger: CATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTC...CATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
3UTR CAA 90 bp CTTCCAGCCCATCTGTTATGTTGGCTCCTTGCTAAGCCAGGCTGTTaGCTTTTATTACAGAATTCAGCCTTTTCTACATTCATTCTGTCT +
Preference number: 2 (lower is better)
Translates to: LPAHLLCWLLAKPGC*LLLQNSAFSTFILS
Trigger: AGACAGAATGAATGTAGAAAAGGCTGAATTCTGTAATAAAAGCAAACAGCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGCTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR CAA 90 bp TTGTTAACTTCAGCTCTGGGAAAGTATCGCTGTCATGTCTTTTACTaGTCTGTTCATTTGGCTTGTTACTCTTCTTGGCTCCAGTTGCAG +
Preference number: 2 (lower is better)
Translates to: LLTSALGKYRCHVFY*SVHLACYSSWLQLQ
Trigger: CTGCAACTGGAGCCAAGAAGAGTAACAAGCCAAATGAACAGACAAGTAAAAGACATGACAGCGATACTTTCCCAGAGCTGAAGTTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGAAGCCAACAACAGCCTaGATAGAAAGAATAGGGCTG +
Preference number: 2 (lower is better)
Translates to: FENCPRTILTLSHIIDPKKPTTA*IERIGL
Trigger: CAGCCCTATTCTTTCTATTCAGGCTGTTGTTGGCTT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGACTCTCTGCCTTTGTaGACACAGGGTTTTAGAGAA +
Preference number: 2 (lower is better)
Translates to: FENCPRTILTLSHIIDPKDSLPL*TQGFRE
Trigger: TTCTCTAAAACCCTGTGTTCACAAAGGCAGAGAGTC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCGACTCTCTGCCTTTGTaGACACAGGGTTTTAGAGAA +
Preference number: 2 (lower is better)
Translates to: TFENCPRTILTLSHIIDPDSLPL*TQGFRE
Trigger: TTCTCTAAAACCCTGTGTTCACAAAGGCAGAGAGTC...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTTCCACTCCAACATTTaGGAACTGCCCAAGGACTAT +
Preference number: 2 (lower is better)
Translates to: TFENCPRTILTLSHIIDPFHSNI*ELPKDY
Trigger: ATAGTCCTTGGGCAGTTCTCAAATGTTGGAGTGGAA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR TCA 90 bp TTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTGAGACTGAGCTCTTCAACAAGTTaGCTAAATCTCGTACTTTCT +
Preference number: 2 (lower is better)
Translates to: FVLRVLTVPRLESWTLRLSSSTS*LNLVLS
Trigger: AGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCT...CAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR TCA 90 bp CTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGTGGTTCCTTGAGGGGTaGTTTGTAACAATTCTTGAT +
Preference number: 2 (lower is better)
Translates to: LSCTLLSGVQIIITGLMMWFLEG*FVTILD
Trigger: ATCAAGAATTGTTACAAATCACCCCTCAAGGAACCA...CATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR TCA 90 bp TGCCTGGTAGAAGACTTCCTCCTCAGCCTATTCTTTTTAGGTGCTTTTGAATTGCTCCACATGCAAGTTTaGAACAGAACTACCCTGATA +
Preference number: 2 (lower is better)
Translates to: CLVEDFLLSLFFLGAFELLHMQV*NRTTLI
Trigger: TATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAG...CAATTCAAAAGCACCTAAAAAGAATAGGCTGAGGAGGAAGTCTTCTACCAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR TCA 90 bp AGAAAATATTTCAGTGTCCGTTCACACACAAACTCAGCATCTGTTTTCATAACAGCAGTATCAGTAGTATaGGCAGCAGCTGGACTCTGG +
Preference number: 2 (lower is better)
Translates to: RKYFSVRSHTNSASVFITAVSVV*AAAGLW
Trigger: CCAGAGTCCAGCTGCTGCTCATACTACTGATACTGC...TGTTATGAAAACAGATGCTGAGTTTGTGTGTGAACGGACACTGAAATATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR GCA 90 bp ATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACAAAAATTATAGCTGTTTaGATACTCCAAACCTGTGTC +
Preference number: 2 (lower is better)
Translates to: IRCFVLRVLTVPRLESWTKIIAV*ILQTCV
Trigger: GACACAGGTTTGGAGTATGCAAACAGCTATAATTTT...TGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR GCA 90 bp GGTGTTCAAATCATTATTACTGGGTTGATGATGTTCAGTATTTGTTACATCCGTTGGATGCCTCTCAGCTaGACGCTTCTCAGTGGTGTT +
Preference number: 2 (lower is better)
Translates to: GVQIIITGLMMFSICYIRWMPLS*TLLSGV
Trigger: AACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCA...ACGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR GCA 90 bp TCTGCAACTTTCAATTGGGGAACTTTCAATGCAGAGGTTGAAGATGGTATGTTGCTTCTTGGCTCCAGTTaGAGGTTCTTTACCTTCCAT +
Preference number: 2 (lower is better)
Translates to: SATFNWGTFNAEVEDGMLLLGSS*RFFTFH
Trigger: ATGGAAGGTAAAGAACCTGCAACTGGAGCCAAGAAG...CAACATACCATCTTCAACCTCTGCATTGAAAGTTCCCCAATTGAAAGTTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTAGCATCTTGCTCAATTaGTGGCGTTTAAATGGTTTT +
Preference number: 2 (lower is better)
Translates to: RSKLRETSYSLEAKPLCASILLN*WRLNGF
Trigger: AAAACCATTTAAACGCCACCAATTGAGCAAGATGCT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR CCA 90 bp CATGCTGTTCTAACACAGCTTCTAGTTCAGCCATTTCCTGCTGGAGCTTTATCACTTGATGGGAAAAAGTaGTGGTATACGATATGGGTT +
Preference number: 2 (lower is better)
Translates to: HAVLTQLLVQPFPAGALSLDGKK*WYTIWV
Trigger: AACCCATATCGTATACCACCACTTTTTCCCATCAAG...TGATAAAGCTCCAGCAGGAAATGGCTGAACTAGAAGCTGTGTTAGAACAGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CAA 90 bp CTGTCATGTCTTTTACTTGTCTGTTCATTTGGCTTGTTACTCTTCTaGGCTCCAGTTGCAGGTTCTTTACCTTCCATGAGTTGTAGGTTT +
Preference number: 2 (lower is better)
Translates to: LSCLLLVCSFGLLLF*APVAGSLPSMSCRF
Trigger: AAACCTACAACTCATGGAAGGTAAAGAACCTGCAACTGGAGCCAAGAAGAGTAACAAGCCAAATGAACAGACAAGTAAAAGACATGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CAA 90 bp GGTTCTTTATTTTTACTGGTAGAACTATCTGCAGACACCTCAAACTaGTCAGCAGAAAGGCCTTCTGGATTCTGGCTTATAGGGTATTCA +
Preference number: 2 (lower is better)
Translates to: GSLFLLVELSADTSN*SAERPSGFWLIGYS
Trigger: TGAATACCCTATAAGCCAGAATCCAGAAGGCCTTTCTGCTGACAAGTTTGAGGTGTCTGCAGATAGTTCTACCAGTAAAAATAAAGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAAGCCAACAACAGCCTaGATAGAAAGAATAGGGCTG +
Preference number: 2 (lower is better)
Translates to: PTFENCPRTILTLSHIIDKPTTA*IERIGL
Trigger: CAGCCCTATTCTTTCTATTCAGGCTGTTGTTGGCTT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGACTCTCTGCCTTTGTaGACACAGGGTTTTAGAGAA +
Preference number: 2 (lower is better)
Translates to: PTFENCPRTILTLSHIIDDSLPL*TQGFRE
Trigger: TTCTCTAAAACCCTGTGTTCACAAAGGCAGAGAGTC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR TCA 90 bp ATTCAGACTCCCCATCATGTGAGTCATCAGAACCTAACAGTTCATCACTTCTGGAAACCTGTGTCAAGCTaGAAAGCACAAATGATTTTC +
Preference number: 2 (lower is better)
Translates to: IQTPHHVSHQNLTVHHFWKPVSS*KAQMIF
Trigger: GAAAATCATTTGTGCTTTTCAGCTTGACACAGGTTT...CCAGAAGTGATGAACTGTTAGGTTCTGATGACTCACATGATGGGGAGTCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
3UTR-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCCAACATTTGAGAACTaGCCAAGGACTATTCTGACT +
Preference number: 2 (lower is better)
Translates to: TFENCPRTILTLSHIIDPPTFEN*PRTILT
Trigger: AGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR GCA 90 bp GATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCCATACAAAATTATAGCTGTTTaGATACTCCAAACCTGTGTC +
Preference number: 2 (lower is better)
Translates to: DFRVHSVEVFWHGFCSPYKIIAV*ILQTCV
Trigger: GACACAGGTTTGGAGTATGCAAACAGCTATAATTTT...GTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000461221.5
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR GCA 90 bp GCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGGATGCCTCTCACACTGCAATAAGTTaGCTTATTAACGGTATCTTC +
Preference number: 2 (lower is better)
Translates to: APHASLKQNYPDTFLDASHTAIS*LINGIF
Trigger: GAAGATACCGTTAATAAGGCAACTTATTGCAGTGTG...AGAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CCA 90 bp TGGCATTTGATTCAGACTCCCCATCATGTGAGTCATCAGAACCTAACAGTTCATCTGCACGCTTCTCAGTaGTGTTCAAATCATTATTAC +
Preference number: 2 (lower is better)
Translates to: WHLIQTPHHVSHQNLTVHLHASQ*CSNHYY
Trigger: GTAATAATGATTTGAACACCACTGAGAAGCGTGCAG...ATGAACTGTTAGGTTCTGATGACTCACATGATGGGGAGTCTGAATCAAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
3UTR-3UTR CCA 90 bp ATAAACTGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTGCCACATGCTGCACGCTTCTCAGTaGTGTTCAAATCATTATTAC +
Preference number: 2 (lower is better)
Translates to: INCCSHAVMSWHEYLCHMLHASQ*CSNHYY
Trigger: GTAATAATGATTTGAACACCACTGAGAAGCGTGCAG...CATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CCA 90 bp TCTTCAGAAGGATCAGATTCAGGGTCATCAGAGAAGAGGCTGATTCCAGATTCCAAGTCCATGTTTATTTaGAGTAATGAGTCCAGTTTC +
Preference number: 2 (lower is better)
Translates to: SSEGSDSGSSEKRLIPDSKSMFI*SNESSF
Trigger: GAAACTGGACTCATTACTCCAAATAAACATGGACTT...GGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CAA 90 bp CTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTaGATGATGTTCAGTATTTGTTACATCCGTCTCAGAAAATTCACA +
Preference number: 2 (lower is better)
Translates to: LSCTLLSGVQIIITG*MMFSICYIRLRKFT
Trigger: TGTGAATTTTCTGAGACGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR CAA 90 bp TTTGTTTGGAAGAACCAATCAAGAAAGGATCCTGGGTGTTTGTATTaGCAGTCAAGTCTTCCAATTCACTGCACTGTGAAGAAAACAAGC +
Preference number: 2 (lower is better)
Translates to: FVWKNQSRKDPGCLY*QSSLPIHCTVKKTS
Trigger: GCTTGTTTTCTTCACAGTGCAGTGAATTGGAAGACTTGACTGCAAATACAAACACCCAGGATCCTTTCTTGATTGGTTCTTCCAAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR TCA 90 bp ATAAACTGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTGCCACATGAAACCTGTGTCAAGCTaGAAAGCACAAATGATTTTC +
Preference number: 2 (lower is better)
Translates to: INCCSHAVMSWHEYLCHMKPVSS*KAQMIF
Trigger: GAAAATCATTTGTGCTTTTCAGCTTGACACAGGTTT...CATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR TCA 90 bp TCTGCAACTTTCAATTGGGGAACTTTCAATGCAGAGGTTGAAGATGGTATGTTGTGGTTCCTTGAGGGGTaGTTTGTAACAATTCTTGAT +
Preference number: 2 (lower is better)
Translates to: SATFNWGTFNAEVEDGMLWFLEG*FVTILD
Trigger: ATCAAGAATTGTTACAAATCACCCCTCAAGGAACCA...CAACATACCATCTTCAACCTCTGCATTGAAAGTTCCCCAATTGAAAGTTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR TCA 90 bp AGTTTCTGCTTATTCCATTCTTTTCTCTCACACAGGGGATCAGCATTCAGATCTTGGTTCCTTGAGGGGTaGTTTGTAACAATTCTTGAT +
Preference number: 2 (lower is better)
Translates to: SFCLFHSFLSHRGSAFRSWFLEG*FVTILD
Trigger: ATCAAGAATTGTTACAAATCACCCCTCAAGGAACCA...AGATCTGAATGCTGATCCCCTGTGTGAGAGAAAAGAATGGAATAAGCAGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
3UTR-3UTR GCA 90 bp CTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGAAAATTATAGCTGTTTaGATACTCCAAACCTGTGTC +
Preference number: 2 (lower is better)
Translates to: LSCTLLSGVQIIITGLMMKIIAV*ILQTCV
Trigger: GACACAGGTTTGGAGTATGCAAACAGCTATAATTTT...CATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CCA 90 bp CACTTTTACATATTAAAGCCTCATGAGGATCACTGGCCAGTAAGTCTATTTTCTTCTGTAGAAGTCTTTTaGCACGGTTTCTGTAGCCCA +
Preference number: 2 (lower is better)
Translates to: HFYILKPHEDHWPVSLFSSVEVF*HGFCSP
Trigger: TGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGA...AGAAAATAGACTTACTGGCCAGTGATCCTCATGAGGCTTTAATATGTAAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
3UTR-3UTR CCA 90 bp AAGGTATATTGTTTACTTTACCAAATAACAAGTGTTGGAAGCAGGGAAGCTCTTTTACATGGCTTAAGTTaGGGAGGCTTGCCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: KVYCLLYQITSVGSREALLHGLS*GGLPSS
Trigger: GGAAGAAGGCAAGCCTCCCCAACTTAAGCCATGTAA...AAGAGCTTCCCTGCTTCCAACACTTGTTATTTGGTAAAGTAAACAATATACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR TCA 90 bp CTTCTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCTCATTCAGTCAAAGATaGCGTCCTAGCTGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: LLIGRTGFTFMSHKMIKFSFSQR*RPSCVK
Trigger: CTTCACACAGCTAGGACGTCATCTTTGACTGAATGA...GAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
3UTR-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAGCATCTTGCTCAATTaGTGGCGTTTAAATGGTTTT +
Preference number: 2 (lower is better)
Translates to: TFENCPRTILTLSHIIDPSILLN*WRLNGF
Trigger: AAAACCATTTAAACGCCACCAATTGAGCAAGATGCT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR CCA 90 bp GGTACCAATGAAATACTGCTACTCTCTACAGATCTTTCAGTTTGCAAAACCCTTATACATCAGCTACTTTaGCATTTGATTCAGACTCCC +
Preference number: 2 (lower is better)
Translates to: GTNEILLLSTDLSVCKTLIHQLL*HLIQTP
Trigger: GGGAGTCTGAATCAAATGCCAAAGTAGCTGATGTAT...AAGGGTTTTGCAAACTGAAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CCA 90 bp TCTGAAGAACCAGAATATTCATCTACCTCATTTAGAACGTCCAATACATCAGCTCCTCATGAGGATCACTaGCCAGTAAGTCTATTTTCT +
Preference number: 2 (lower is better)
Translates to: SEEPEYSSTSFRTSNTSAPHEDH*PVSLFS
Trigger: AGAAAATAGACTTACTGGCCAGTGATCCTCATGAGG...AGCTGATGTATTGGACGTTCTAAATGAGGTAGATGAATATTCTGGTTCTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
3UTR-3UTR CCA 90 bp GTTCAAATCATTATTACTGGGTTGATGATGTTCAGTATTTGTTACATCCGTCTCGAAGGCCCTTTCTTCTaGTTGAGAAGTTTCAGCATG +
Preference number: 2 (lower is better)
Translates to: VQIIITGLMMFSICYIRLEGPFF*LRSFSM
Trigger: CATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTC...GAGACGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
3UTR CAA 90 bp ATGACCACTATTAGTAATATTCATCACTTGACCATTCTGCTCCGTTaGGTTAGTTCCCTGATTTATCATTTCAGGAGTCTTTTGAACTGC +
Preference number: 2 (lower is better)
Translates to: MTTISNIHHLTILLR*VSSLIYHFRSLLNC
Trigger: GCAGTTCAAAAGACTCCTGAAATGATAAATCAGGGAACTAACCAAACGGAGCAGAATGGTCAAGTGATGAATATTACTAATAGTGGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR GCA 90 bp AGTTTCTGCTTATTCCATTCTTTTCTCTCACACAGGGGATCAGCATTCAGATCTAAAATTATAGCTGTTTaGATACTCCAAACCTGTGTC +
Preference number: 2 (lower is better)
Translates to: SFCLFHSFLSHRGSAFRSKIIAV*ILQTCV
Trigger: GACACAGGTTTGGAGTATGCAAACAGCTATAATTTT...AGATCTGAATGCTGATCCCCTGTGTGAGAGAAAAGAATGGAATAAGCAGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
3UTR-3UTR GCA 90 bp GGTACCAATGAAATACTGCTACTCTCTACAGATCTTTCAGTTTGCAAAACCCTTCACACTGCAATAAGTTaGCTTATTAACGGTATCTTC +
Preference number: 2 (lower is better)
Translates to: GTNEILLLSTDLSVCKTLHTAIS*LINGIF
Trigger: GAAGATACCGTTAATAAGGCAACTTATTGCAGTGTG...AAGGGTTTTGCAAACTGAAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CAA 90 bp AGTTCCATATTGCTTATACTGCTGCTTATAGGTTCAGCTTTCGTTTaGAAAGCAGATTCTTTTTCGAGTGATTCTATTGGGTTAGGATTT +
Preference number: 2 (lower is better)
Translates to: SSILLILLLIGSAFV*KADSFSSDSIGLGF
Trigger: AAATCCTAACCCAATAGAATCACTCGAAAAAGAATCTGCTTTCAAAACGAAAGCTGAACCTATAAGCAGCAGTATAAGCAATATGGAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR TCA 90 bp AAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATAGCTCTTCAACAAGTTaGCTAAATCTCGTACTTTCT +
Preference number: 2 (lower is better)
Translates to: KIIAVCILQTCVKLKSTNSSSTS*LNLVLS
Trigger: AGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCT...ATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461221.5
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR GCA 90 bp AGAAAATATTTCAGTGTCCGTTCACACACAAACTCAGCATCTGTTTTCATAACAGTACCAATGAAATACTaGTACTCTCTACAGATCTTT +
Preference number: 2 (lower is better)
Translates to: RKYFSVRSHTNSASVFITVPMKY*YSLQIF
Trigger: AAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTAC...TGTTATGAAAACAGATGCTGAGTTTGTGTGTGAACGGACACTGAAATATTTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR GCA 72 bp TACACTGTCCAACACCCACTCTCGGGTCACCACAGGTaGCTCACACATCTGCCCAATTGCATGGAAGCCATT +
Preference number: 3 (lower is better)
Translates to: YTVQHPLSGHHR*LTHLPNCMEAI
Trigger: AATGGCTTCCATGCAATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CAA 90 bp TGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCCTCACACATCTGGCTCCACATGCAAGTTaGAAACAGAACTACCCTGAT +
Preference number: 3 (lower is better)
Translates to: CYTVQHPLSGHHRCLTHLAPHAS*KQNYPD
Trigger: ATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGC...CAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR GCA 72 bp TCCGTCAAATCGTGTGGCCCAGACTCTTCCAGCTGTTaGTCCTCCACATCAACAACCTTAATGAGCTCCTCT +
Preference number: 3 (lower is better)
Translates to: SVKSCGPDSSSC*SSTSTTLMSSS
Trigger: AGAGGAGCTCATTAAGGTTGTTGATGTGGAGGAGCAACAGCTGGAAGAGTCTGGGCCACACGATTTGACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR GCA 72 bp GGGGAACTTTCAATGCAGAGGTTGAAGATGGTATGTTaGCAACACGAGCTGACTCTGGGGCTCTGTCTTCAG +
Preference number: 3 (lower is better)
Translates to: GELSMQRLKMVC*QHELTLGLCLQ
Trigger: CTGAAGACAGAGCCCCAGAGTCAGCTCGTGTTGGCAACATACCATCTTCAACCTCTGCATTGAAAGTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CAA 90 bp TCCAACACCCACTCTCGGGTCACCACAGGTGCCTCACACATCTGCCCAATTGCATTCTGCAACTTTCAATaGGGGAACTTTCAATGCAGA +
Preference number: 3 (lower is better)
Translates to: SNTHSRVTTGASHICPIAFCNFQ*GNFQCR
Trigger: TCTGCATTGAAAGTTCCCCAATTGAAAGTTGCAGAA...TGCAATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CAA 90 bp AAGCCATTGTCCTCTGTCCAGGCATCTGGCTGCACAACCACAATTGGGTGGACAACCATTCTGCTCCGTTaGGTTAGTTCCCTGATTTAT +
Preference number: 3 (lower is better)
Translates to: KPLSSVQASGCTTTIGWTTILLR*VSSLIY
Trigger: ATAAATCAGGGAACTAACCAAACGGAGCAGAATGGT...TGTCCACCCAATTGTGGTTGTGCAGCCAGATGCCTGGACAGAGGACAATGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR TCA 72 bp CATGGCTCCACATGCAAGTTTGAAACAGAACTACCCTaGTACTTTTCTGGATGCCTCTCAGCTGCACGCTTC +
Preference number: 3 (lower is better)
Translates to: HGSTCKFETELP*YFSGCLSAARF
Trigger: GAAGCGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR TCA 72 bp CAGAAGGATCAGATTCAGGGTCATCAGAGAAGAGGCTaGTTCCAGATTCCAGGTAAGGGGTTCCCTCTAGAT +
Preference number: 3 (lower is better)
Translates to: QKDQIQGHQRRG*FQIPGKGFPLD
Trigger: ATCTAGAGGGAACCCCTTACCTGGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CCA 72 bp GAAGATCTTTCTGTCCTGGGATTCTCTTGCTCGCTTTaGACCTTGGTGGTTTCTTCCATTGACCACATCTCC +
Preference number: 3 (lower is better)
Translates to: EDLSVLGFSCSL*TLVVSSIDHIS
Trigger: GGAGATGTGGTCAATGGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACAGAAAGATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CAA 90 bp TCTTCAGAAGGATCAGATTCAGGGTCATCAGAGAAGAGGCTGATTCCAGATTCCGTTACATGGCTTAAGTaGGGGAGGCTTGCCTTCTTC +
Preference number: 3 (lower is better)
Translates to: SSEGSDSGSSEKRLIPDSVTWLK*GRLAFF
Trigger: GAAGAAGGCAAGCCTCCCCAACTTAAGCCATGTAAC...GGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCAGCATCTTGCTCAATaGGTGGCGTTTAAATGGTTT +
Preference number: 3 (lower is better)
Translates to: KLRETSYSLEAKPLCASSQHLAQ*VAFKWF
Trigger: AAACCATTTAAACGCCACCAATTGAGCAAGATGCTG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR CAA 90 bp TCTTCAGAAGGATCAGATTCAGGGTCATCAGAGAAGAGGCTGATTCCAGATTCCTCCAAGGTTAGAGAGTaGGACACTGAGACTGGTTTC +
Preference number: 3 (lower is better)
Translates to: SSEGSDSGSSEKRLIPDSSKVRE*DTETGF
Trigger: GAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGA...GGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CAA 90 bp CTTTTGAGGTTGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTGTAGACAGACGTCTTTaGAGGTTGTATCCGCTGCTT +
Preference number: 3 (lower is better)
Translates to: LLRLYPLLCPQSSHSSKVVDRRL*RLYPLL
Trigger: AAGCAGCGGATACAACCTCAAAAGACGTCTGTCTAC...AACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CAA 90 bp TTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTGGCCCTTTCTTCTGGTaGAGAAGTTTCAGCATGCAA +
Preference number: 3 (lower is better)
Translates to: FPARKDFRVHSVEVFWHGGPFFW*RSFSMQ
Trigger: TTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGCC...ACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
3UTR GCA 72 bp AGTAGTATGAGCAGCAGCTGGACTCTGGGCAGATTCTaGAACTTTCAATTGGGGAACTTTCAATGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: SSMSSSWTLGRF*NFQLGNFQCRG
Trigger: ACCTCTGCATTGAAAGTTCCCCAATTGAAAGTTGCAGAATCTGCCCAGAGTCCAGCTGCTGCTCATACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR GCA 72 bp CCCTTTCTGTTGAAGCTGTCAATTCTGGCTTCTCCCTaGTCACACTTTCTTCCATTGCATTATACCCAGCAG +
Preference number: 3 (lower is better)
Translates to: PFLLKLSILASP*SHFLPLHYTQQ
Trigger: CTGCTGGGTATAATGCAATGGAAGAAAGTGTGAGCAGGGAGAAGCCAGAATTGACAGCTTCAACAGAAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CCA 72 bp GTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTaGACACTGAGACTGGTTTCCAAGGAAGGATTTTCG +
Preference number: 3 (lower is better)
Translates to: VLRVLTVPRLES*TLRLVSKEGFS
Trigger: CGAAAATCCTTCCTTGGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CCA 72 bp GCAGCTGGACTCTGGGCAGATTCTGCAACTTTCAATTaGGGAACTTTCAATGCAGAGGTTGAAGATGGTATG +
Preference number: 3 (lower is better)
Translates to: AAGLWADSATFN*GTFNAEVEDGM
Trigger: CATACCATCTTCAACCTCTGCATTGAAAGTTCCCCAATTGAAAGTTGCAGAATCTGCCCAGAGTCCAGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CAA 90 bp TGCCACATGGCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGTCCAAGGTTAGAGAGTaGGACACTGAGACTGGTTTC +
Preference number: 3 (lower is better)
Translates to: CHMAPHASLKQNYPDTFLSKVRE*DTETGF
Trigger: GAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGA...CAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CAA 90 bp CTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGGGCCCTTTCTTCTGGTaGAGAAGTTTCAGCATGCAA +
Preference number: 3 (lower is better)
Translates to: LSCTLLSGVQIIITGLMMGPFFW*RSFSMQ
Trigger: TTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGCC...CATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
3UTR TCA 72 bp GGGCTTAGATTTCTACTGACTACTAGTTCAAGCGCATaGATATGCCTGGTAGAAGACTTCCTCCTCAGCCTA +
Preference number: 3 (lower is better)
Translates to: GLRFLLTTSSSA*ICLVEDFLLSL
Trigger: TAGGCTGAGGAGGAAGTCTTCTACCAGGCATATTCATGCGCTTGAACTAGTAGTCAGTAGAAATCTAAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CCA 72 bp CAACTCCCTGGCTTTCAGACTGATGCCTCATTTGTTTaGAAGAACCAATCAAGAAAGGATCCTGGGTGTTTG +
Preference number: 3 (lower is better)
Translates to: QLPGFQTDASFV*KNQSRKDPGCL
Trigger: CAAACACCCAGGATCCTTTCTTGATTGGTTCTTCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCAGCATCTTGCTCAATaGGTGGCGTTTAAATGGTTT +
Preference number: 3 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAQHLAQ*VAFKWF
Trigger: AAACCATTTAAACGCCACCAATTGAGCAAGATGCTG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR CAA 90 bp TTCTGTGCTGGGAGTCCGCCTATCATTACATGTTTCCTTACTTCCAGCCCATCTTCTGTAGCCCATACTTaGGATGATAGAAACTTCATC +
Preference number: 3 (lower is better)
Translates to: FCAGSPPIITCFLTSSPSSVAHT*DDRNFI
Trigger: GATGAAGTTTCTATCATCCAAAGTATGGGCTACAGA...AGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CAA 90 bp CAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGTTGTAGACAGACGTCTTTaGAGGTTGTATCCGCTGCTT +
Preference number: 3 (lower is better)
Translates to: QLHASQWCSNHYYWVDDVVDRRL*RLYPLL
Trigger: AAGCAGCGGATACAACCTCAAAAGACGTCTGTCTAC...AACATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR TCA 72 bp TCCTTGTCACTCAGACCAACTCCCTGGCTTTCAGACTaGTGCCTCATTTGTTTGGAAGAACCAATCAAGAAA +
Preference number: 3 (lower is better)
Translates to: SLSLRPTPWLSD*CLICLEEPIKK
Trigger: TTTCTTGATTGGTTCTTCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGGAGTTGGTCTGAGTGACAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR GCA 72 bp TGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTaGCACATGGCTCCACATGCAAGTTTGAAACAGAAC +
Preference number: 3 (lower is better)
Translates to: CSHAVMSWHEYL*HMAPHASLKQN
Trigger: GTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR GCA 72 bp TGCTGTTCTAACACAGCTTCTAGTTCAGCCATTTCCTaGTGGAGCTTTATCAGGTTATGTTGCATGGTATCC +
Preference number: 3 (lower is better)
Translates to: CCSNTASSSAIS*WSFIRLCCMVS
Trigger: GGATACCATGCAACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGAACTAGAAGCTGTGTTAGAACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CCA 72 bp CCATTTCCTGCTGGAGCTTTATCAGGTTATGTTGCATaGTATCCCTCTGCTGAGTGGTTAAAATGTCACTCT +
Preference number: 3 (lower is better)
Translates to: PFPAGALSGYVA*YPSAEWLKCHS
Trigger: AGAGTGACATTTTAACCACTCAGCAGAGGGATACCATGCAACATAACCTGATAAAGCTCCAGCAGGAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CCA 72 bp TGTTCTAACACAGCTTCTAGTTCAGCCATTTCCTGCTaGAGCTTTATCAGGTTATGTTGCATGGTATCCCTC +
Preference number: 3 (lower is better)
Translates to: CSNTASSSAISC*SFIRLCCMVSL
Trigger: GAGGGATACCATGCAACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGAACTAGAAGCTGTGTTAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CCA 72 bp TGCAGACACCTCAAACTTGTCAGCAGAAAGGCCTTCTaGATTCTGGCTTATAGGGTATTCACTACTTTTCTG +
Preference number: 3 (lower is better)
Translates to: CRHLKLVSRKAF*ILAYRVFTTFL
Trigger: CAGAAAAGTAGTGAATACCCTATAAGCCAGAATCCAGAAGGCCTTTCTGCTGACAAGTTTGAGGTGTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CCA 72 bp CTCCACATCAACAACCTTAATGAGCTCCTCTTGAGATaGGTAGTTTCTATTCTGAAGACTCCCAGAGCAACT +
Preference number: 3 (lower is better)
Translates to: LHINNLNELLLR*VVSILKTPRAT
Trigger: AGTTGCTCTGGGAGTCTTCAGAATAGAAACTACCCATCTCAAGAGGAGCTCATTAAGGTTGTTGATGTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CAA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCGTTCCACTCCAACATTaGAGAACTGCCCAAGGACTA +
Preference number: 3 (lower is better)
Translates to: TFENCPRTILTLSHIIDPVPLQH*RTAQGL
Trigger: TAGTCCTTGGGCAGTTCTCAAATGTTGGAGTGGAAC...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR CAA 90 bp ACAGTTCCAAGGTTAGAGAGTTGGACACTGAGACTGGTTTCCTGCAAGGAAGGACAAAATTATAGCTGTTaGCATACTCCAAACCTGTGT +
Preference number: 3 (lower is better)
Translates to: TVPRLESWTLRLVSCKEGQNYSC*HTPNLC
Trigger: ACACAGGTTTGGAGTATGCAAACAGCTATAATTTTG...TCCTTCCTTGCAGGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CAA 90 bp CTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTGAGACTGGTTTCCCAAAATTATAGCTGTTaGCATACTCCAAACCTGTGT +
Preference number: 3 (lower is better)
Translates to: LRVLTVPRLESWTLRLVSQNYSC*HTPNLC
Trigger: ACACAGGTTTGGAGTATGCAAACAGCTATAATTTTG...GGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CAA 90 bp TTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTCTGTAGCCCATACTTaGGATGATAGAAACTTCATC +
Preference number: 3 (lower is better)
Translates to: FPARKDFRVHSVEVFWHGSVAHT*DDRNFI
Trigger: GATGAAGTTTCTATCATCCAAAGTATGGGCTACAGA...ACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CAA 90 bp ATGAGCTGGCATGAGTATTTGTGCCACATGGCTCCACATGCAAGTTTGAAACAGGCTAAGCCAGGCTGTTaGCTTTTATTACAGAATTCA +
Preference number: 3 (lower is better)
Translates to: MSWHEYLCHMAPHASLKQAKPGC*LLLQNS
Trigger: TGAATTCTGTAATAAAAGCAAACAGCCTGGCTTAGC...CTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCAGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR TCA 72 bp CCACTCTGTGCTTCCAGCCCTAAGCCAACAACAGCCTaGATAGAAAGAATAGGGCTGATAAATAATGAATCA +
Preference number: 3 (lower is better)
Translates to: PLCASSPKPTTA*IERIGLINNES
Trigger: TGATTCATTATTTATCAGCCCTATTCTTTCTATTCAGGCTGTTGTTGGCTTAGGGCTGGAAGCACAGAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR TCA 72 bp CTCAGAATTTCCTCCCCAATGTTCCACTCCAACATTTaGGAACTGCCCAAGGACTATTCTGACTTTAAGTCA +
Preference number: 3 (lower is better)
Translates to: LRISSPMFHSNI*ELPKDYSDFKS
Trigger: TGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGGAGTGGAACATTGGGGAGGAAATTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR TCA 72 bp ATGAGTATTTGTGCCACATGGCTCCACATGCAAGTTTaGAACAGAACTACCCTGATACTTTTCTGGATGCCT +
Preference number: 3 (lower is better)
Translates to: MSICATWLHMQV*NRTTLILFWMP
Trigger: AGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR TCA 72 bp AATAAACTGCTGTTCTCATGCTGTAATGAGCTGGCATaGGTATTTGTGCCACATGGCTCCACATGCAAGTTT +
Preference number: 3 (lower is better)
Translates to: NKLLFSCCNELA*VFVPHGSTCKF
Trigger: AAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR GCA 72 bp AGAACTACCCTGATACTTTTCTGGATGCCTCTCAGCTaGACGCTTCTCAGTGGTGTTCAAATCATTATTACT +
Preference number: 3 (lower is better)
Translates to: RTTLILFWMPLS*TLLSGVQIIIT
Trigger: AGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGTAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR CCA 72 bp ACTTTTCTGGATGCCTCTCAGCTGCACGCTTCTCAGTaGTGTTCAAATCATTATTACTGGGTTGATGATGTT +
Preference number: 3 (lower is better)
Translates to: TFLDASQLHASQ*CSNHYYWVDDV
Trigger: AACATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCAGAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR-3UTR CAA 90 bp GGTACCAATGAAATACTGCTACTCTCTACAGATCTTTCAGTTTGCAAAACCCTTAGACGTCTTTTGAGGTaGTATCCGCTGCTTTGTCCT +
Preference number: 3 (lower is better)
Translates to: GTNEILLLSTDLSVCKTLRRLLR*YPLLCP
Trigger: AGGACAAAGCAGCGGATACAACCTCAAAAGACGTCT...AAGGGTTTTGCAAACTGAAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CAA 90 bp TCTGCAACTTTCAATTGGGGAACTTTCAATGCAGAGGTTGAAGATGGTATGTTGCAGCTACTTTGGCATTaGATTCAGACTCCCCATCAT +
Preference number: 3 (lower is better)
Translates to: SATFNWGTFNAEVEDGMLQLLWH*IQTPHH
Trigger: ATGATGGGGAGTCTGAATCAAATGCCAAAGTAGCTG...CAACATACCATCTTCAACCTCTGCATTGAAAGTTCCCCAATTGAAAGTTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CCA 72 bp ACCTCAAACTTGTCAGCAGAAAGGCCTTCTGGATTCTaGCTTATAGGGTATTCACTACTTTTCTGTGAAGTT +
Preference number: 3 (lower is better)
Translates to: TSNLSAERPSGF*LIGYSLLFCEV
Trigger: AACTTCACAGAAAAGTAGTGAATACCCTATAAGCCAGAATCCAGAAGGCCTTTCTGCTGACAAGTTTGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CAA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCAGCATCTTGCTCAATaGGTGGCGTTTAAATGGTTT +
Preference number: 3 (lower is better)
Translates to: TFENCPRTILTLSHIIDPQHLAQ*VAFKWF
Trigger: AAACCATTTAAACGCCACCAATTGAGCAAGATGCTG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR CAA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCAGCATCTTGCTCAATaGGTGGCGTTTAAATGGTTT +
Preference number: 3 (lower is better)
Translates to: FENCPRTILTLSHIIDPKQHLAQ*VAFKWF
Trigger: AAACCATTTAAACGCCACCAATTGAGCAAGATGCTG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR-3UTR CAA 90 bp CACTTTTACATATTAAAGCCTCATGAGGATCACTGGCCAGTAAGTCTATTTTCTAGACGTCTTTTGAGGTaGTATCCGCTGCTTTGTCCT +
Preference number: 3 (lower is better)
Translates to: HFYILKPHEDHWPVSLFSRRLLR*YPLLCP
Trigger: AGGACAAAGCAGCGGATACAACCTCAAAAGACGTCT...AGAAAATAGACTTACTGGCCAGTGATCCTCATGAGGCTTTAATATGTAAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
3UTR TCA 72 bp TTGAAAACGGAGCAAATGACTGGCGCTTTGAAACCTTaGATGTATTCTGCAAATACTGAGCATCAAGTTCAC +
Preference number: 3 (lower is better)
Translates to: LKTEQMTGALKP*MYSANTEHQVH
Trigger: GTGAACTTGATGCTCAGTATTTGCAGAATACATTCAAGGTTTCAAAGCGCCAGTCATTTGCTCCGTTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR TCA 72 bp AGACACTCGGTAGCAACGGTGCTATGCCTAGTAGACTaGGAAGGTATATTGTTTACTTTACCAAATAACAAG +
Preference number: 3 (lower is better)
Translates to: RHSVATVLCLVD*EGILFTLPNNK
Trigger: CTTGTTATTTGGTAAAGTAAACAATATACCTTCTCAGTCTACTAGGCATAGCACCGTTGCTACCGAGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CAA 90 bp GGTACCAATGAAATACTGCTACTCTCTACAGATCTTTCAGTTTGCAAAACCCTTCATTTCAGGAGTCTTTaGAACTGCCAAATCTGCTTT +
Preference number: 3 (lower is better)
Translates to: GTNEILLLSTDLSVCKTLHFRSL*NCQICF
Trigger: AAAGCAGATTTGGCAGTTCAAAAGACTCCTGAAATG...AAGGGTTTTGCAAACTGAAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR TCA 72 bp TATCCAAGGAACATCTTCAGTATCTCTAGGATTCTCTaGGCATGGCAGTTTCTGCTTATTCCATTCTTTTCT +
Preference number: 3 (lower is better)
Translates to: YPRNIFSISRIL*AWQFLLIPFFS
Trigger: AGAAAAGAATGGAATAAGCAGAAACTGCCATGCTCAGAGAATCCTAGAGATACTGAAGATGTTCCTTGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
3UTR TCA 72 bp ATACTACATTTGGCATTATCAACTGGCTTATCTTTCTaGCCAACCACAGGAAAGCCTGCAGTGATATTAACT +
Preference number: 3 (lower is better)
Translates to: ILHLALSTGLSF*PTTGKPAVILT
Trigger: AGTTAATATCACTGCAGGCTTTCCTGTGGTTGGTCAGAAAGATAAGCCAGTTGATAATGCCAAATGTAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR TCA 72 bp TGTATTTGCAGTCAAGTCTTCCAATTCACTGCACTGTaGAGAAAACAAGCTAGCAGAACATTTTGTTTCCTC +
Preference number: 3 (lower is better)
Translates to: CICSQVFQFTAL*RKQASRTFCFL
Trigger: GAGGAAACAAAATGTTCTGCTAGCTTGTTTTCTTCACAGTGCAGTGAATTGGAAGACTTGACTGCAAATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR-3UTR CAA 90 bp TCTGAAGAACCAGAATATTCATCTACCTCATTTAGAACGTCCAATACATCAGCTTCTGTAGCCCATACTTaGGATGATAGAAACTTCATC +
Preference number: 3 (lower is better)
Translates to: SEEPEYSSTSFRTSNTSASVAHT*DDRNFI
Trigger: GATGAAGTTTCTATCATCCAAAGTATGGGCTACAGA...AGCTGATGTATTGGACGTTCTAAATGAGGTAGATGAATATTCTGGTTCTTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
3UTR TCA 72 bp AACACTTTTTCTTCCTTCAGCAAGCAAAATTATTTATaGAGCTGTATGGTTTCAGCAACAGGGAGCAAAGGA +
Preference number: 3 (lower is better)
Translates to: NTFSSFSKQNYL*SCMVSATGSKG
Trigger: TCCTTTGCTCCCTGTTGCTGAAACCATACAGCTTCATAAATAATTTTGCTTGCTGAAGGAAGAAAAAGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
3UTR-3UTR CAA 90 bp CACTTTTACATATTAAAGCCTCATGAGGATCACTGGCCAGTAAGTCTATTTTCTCAAAATTATAGCTGTTaGCATACTCCAAACCTGTGT +
Preference number: 3 (lower is better)
Translates to: HFYILKPHEDHWPVSLFSQNYSC*HTPNLC
Trigger: ACACAGGTTTGGAGTATGCAAACAGCTATAATTTTG...AGAAAATAGACTTACTGGCCAGTGATCCTCATGAGGCTTTAATATGTAAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
3UTR-3UTR CAA 90 bp TGGTGTTCAAATCATTATTACTGGGTTGATGATGTTCAGTATTTGTTACATCCGCAAAATTATAGCTGTTaGCATACTCCAAACCTGTGT +
Preference number: 3 (lower is better)
Translates to: WCSNHYYWVDDVQYLLHPQNYSC*HTPNLC
Trigger: ACACAGGTTTGGAGTATGCAAACAGCTATAATTTTG...CGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAACACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR TCA 72 bp AAAGCACAAATGATTTTCAATAGCTCTTCAACAAGTTaGCTAAATCTCGTACTTTCTTGTAGGCTCCTTTTG +
Preference number: 3 (lower is better)
Translates to: KAQMIFNSSSTS*LNLVLSCRLLL
Trigger: CAAAAGGAGCCTACAAGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCTATTGAAAATCATTTGTGCTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
3UTR GCA 72 bp GTTCCTGAGATGCCTTTGCCAATATTACCTGGTTACTaGAGTCATTTAAGCTATTCTTCAATGATAATAAAT +
Preference number: 3 (lower is better)
Translates to: VPEMPLPILPGY*SHLSYSSMIIN
Trigger: ATTTATTATCATTGAAGAATAGCTTAAATGACTGCAGTAACCAGGTAATATTGGCAAAGGCATCTCAGGAAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCCTCCACCTCCCGGGCTaGAGTGATTCTCCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCLHLPG*SDSPAL
Trigger: TAAGGCAGGAGAATCACTTCAGCCCGGGAGGTGGAG...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468300.5
CDS-3UTR TCA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCCTGTGGGCATGTTGGTaGAGGGCCCATAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCLWACW*RAHSNR
Trigger: TCTGTTGCTATGGGCCCTTCACCAACATGCCCACAG...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR GCA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCTCGGGTCACCACAGGTaGCTCACACATCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCSGHHR*LTHLPN
Trigger: ATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGA...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR CCA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCACCCTGATACTTTTCTaGATGCCTCTCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCTLILF*MPLSCT
Trigger: CGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGT...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR TCA 90 bp TGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCCTCACACATCTGTGGAGACAGGTTCCTTaGTCAACTCCAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: CYTVQHPLSGHHRCLTHLWRQVP*STPDRW
Trigger: CCATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCA...CAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCTCAGGTTATGTTGCATaGTATCCCTCTGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCSGYVA*YPSAEW
Trigger: CCACTCAGCAGAGGGATACCATGCAACATAACCTGA...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR TCA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCGCCCTTTCTTCTGGTTaGGAAGTTTCAGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCALSSG*EVSACK
Trigger: TTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGC...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR TCA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCTTCCACTCCAACATTTaGGAACTGCCCAAGGACTAT +
Preference number: 4 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCFHSNI*ELPKDY
Trigger: ATAGTCCTTGGGCAGTTCTCAAATGTTGGAGTGGAA...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468300.5
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTCCACCTCCCGGGCTaGAGTGATTCTCCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLHLPG*SDSPAL
Trigger: TAAGGCAGGAGAATCACTTCAGCCCGGGAGGTGGAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTGTGGGCATGTTGGTaGAGGGCCCATAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLWACW*RAHSNR
Trigger: TCTGTTGCTATGGGCCCTTCACCAACATGCCCACAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCGGGGTTTTCAAATGCTaGACACTGACTCACACATTT +
Preference number: 4 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCGVFKC*TLTHTF
Trigger: AAATGTGTGAGTCAGTGTGCAGCATTTGAAAACCCC...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCGTGATGTTCCTGAGATaGCTTTGCCAATATTACCTG +
Preference number: 4 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCVMFLR*LCQYYL
Trigger: CAGGTAATATTGGCAAAGGCATCTCAGGAACATCAC...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCACTGGTAGAACTATCTaGAGACACCTCAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCTGRTI*RHLKLV
Trigger: GACAAGTTTGAGGTGTCTGCAGATAGTTCTACCAGT...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTCGGGTCACCACAGGTaGCTCACACATCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSSGHHR*LTHLPN
Trigger: ATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCCCGCGCTTTTCCGTTaGCACGGAAACCAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAPALFR*HGNQGA
Trigger: AGCCCCTTGGTTTCCGTGGCAACGGAAAAGCGCGGG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCTGGTTCCTTGAGGGGTaGTTTGTAACAATTCTTGAT +
Preference number: 4 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCWFLEG*FVTILD
Trigger: ATCAAGAATTGTTACAAATCACCCCTCAAGGAACCA...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR TCA 90 bp TCCAACACCCACTCTCGGGTCACCACAGGTGCCTCACACATCTGCCCAATTGCACAGTTTCGTTGCCTCTaGACTGAGATGATAGACAAA +
Preference number: 4 (lower is better)
Translates to: SNTHSRVTTGASHICPIAQFRCL*TEMIDK
Trigger: TTTGTCTATCATCTCAGTTCAGAGGCAACGAAACTG...TGCAATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGTTGCCAACACGAGCTaGCTCTGGGGCTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAVANTS*LWGSVF
Trigger: GAAGACAGAGCCCCAGAGTCAGCTCGTGTTGGCAAC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAACCAGCTATTCTCTTaGGGCCAAGCCACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSNQLFS*GQATLC
Trigger: GCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTGGATGCCTCTCAGCTaGACGCTTCTCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSWMPLS*TLLSGV
Trigger: AACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGTCCTGGGATTCTCTTaGTCGCTTTGGACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSVLGFS*SLWTLV
Trigger: CACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGAC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAGGCGTGAGCCACCATaGCCAGGTTTCAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSRREPP*PGFKFP
Trigger: AGGAAACTTGAAACCTGGGCATGGTGGCTCACGCCT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCCTGCACGCTTCTCAGTaGTGTTCAAATCATTATTAC +
Preference number: 4 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCLHASQ*CSNHYY
Trigger: GTAATAATGATTTGAACACCACTGAGAAGCGTGCAG...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGCCCATCTGTTATGTTaGCTCCTTGCTAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSAHLLC*LLAKPG
Trigger: GCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCACAACCACAATTGGGTaGACACCTGTGCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSTTTIG*TPVPRV
Trigger: CACCCTTGGCACAGGTGTCCACCCAATTGTGGTTGT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
3UTR CAA 72 bp TCTGAGAGGATAGCCCTGAGCAGTCTTCAGAGACGCTaGTTTCACTCTCACACCCAGATGCTGCTTCACCTA +
Preference number: 4 (lower is better)
Translates to: SERIALSSLQRR*FHSHTQMLLHL
Trigger: TAGGTGAAGCAGCATCTGGGTGTGAGAGTGAAACAAGCGTCTCTGAAGACTGCTCAGGGCTATCCTCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CAA 72 bp TTCCGTCAAATCGTGTGGCCCAGACTCTTCCAGCTGTaGCTCCTCCACATCAACAACCTTAATGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FRQIVWPRLFQL*LLHINNLNELL
Trigger: GAGGAGCTCATTAAGGTTGTTGATGTGGAGGAGCAACAGCTGGAAGAGTCTGGGCCACACGATTTGACGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTCAGGATGAAGGCCTaGTGTAGGTCTCCTTTTACG +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLRMKA*CRSPFT
Trigger: CGTAAAAGGAGACCTACATCAGGCCTTCATCCTGAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAGATTTCTAGCCCCCTaGAGATCTTTCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSRFLAP*RSFCPG
Trigger: CCCAGGACAGAAAGATCTTCAGGGGGCTAGAAATCT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCTGGTTTCGAACTCCTaGCCTCCAGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCALVSNS*PPVICP
Trigger: TGGGCAGATCACTGGAGGTCAGGAGTTCGAAACCAG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCACCCTGATACTTTTCTaGATGCCTCTCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSTLILF*MPLSCT
Trigger: CGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp ACAGTTCCAAGGTTAGAGAGTTGGACACTGAGACTGGTTTCCTGCAAGGAAGGAGCCCATCTGTTATGTTaGCTCCTTGCTAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TVPRLESWTLRLVSCKEGAHLLC*LLAKPG
Trigger: GCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGC...TCCTTCCTTGCAGGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCACAACCACAATTGGGTaGACACCCTGTGGGCATGTT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSTTTIG*TPCGHV
Trigger: AACATGCCCACAGGGTGTCCACCCAATTGTGGTTGT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468300.5
3UTR CAA 72 bp TGGGGAACTTTCAATGCAGAGGTTGAAGATGGTATGTaGCCAACACGAGCTGACTCTGGGGCTCTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: WGTFNAEVEDGM*PTRADSGALSS
Trigger: TGAAGACAGAGCCCCAGAGTCAGCTCGTGTTGGCAACATACCATCTTCAACCTCTGCATTGAAAGTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CAA 72 bp CTTTCTGTCCTGGGATTCTCTTGCTCGCTTTGGACCTaGGTGGTTTCTTCCATTGACCACATCTCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LSVLGFSCSLWT*VVSSIDHISSD
Trigger: GTCAGAGGAGATGTGGTCAATGGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp TGGCATTTGATTCAGACTCCCCATCATGTGAGTCATCAGAACCTAACAGTTCATGTTGCCAACACGAGCTaGCTCTGGGGCTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: WHLIQTPHHVSHQNLTVHVANTS*LWGSVF
Trigger: GAAGACAGAGCCCCAGAGTCAGCTCGTGTTGGCAAC...ATGAACTGTTAGGTTCTGATGACTCACATGATGGGGAGTCTGAATCAAATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGCAGTATCAGTAGTATaGGCAGCAGCTGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAAVSVV*AAAGLW
Trigger: CCAGAGTCCAGCTGCTGCTCATACTACTGATACTGC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp TCTTCAGAAGGATCAGATTCAGGGTCATCAGAGAAGAGGCTGATTCCAGATTCCGCAGTATCAGTAGTATaGGCAGCAGCTGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: SSEGSDSGSSEKRLIPDSAVSVV*AAAGLW
Trigger: CCAGAGTCCAGCTGCTGCTCATACTACTGATACTGC...GGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp TGGCATGAGTATTTGTGCCACATGGCTCCACATGCAAGTTTGAAACAGAACTACCTGTGGGCATGTTGGTaGAGGGCCCATAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: WHEYLCHMAPHASLKQNYLWACW*RAHSNR
Trigger: TCTGTTGCTATGGGCCCTTCACCAACATGCCCACAG...GTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTAACCAGCTATTCTCTTaGGGCCAAGCCACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCANQLFS*GQATLC
Trigger: GCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCAAAATTATAGCTGTTTaGATACTCCAAACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCKIIAV*ILQTCV
Trigger: GACACAGGTTTGGAGTATGCAAACAGCTATAATTTT...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTGAGACTGGTTTCCTaGAAGGAAGGATTTTCGGGT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLRLVS*KEGFSG
Trigger: ACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTGGCATGAGTATTTGTaGCACATGGCTCCACATGCA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSWHEYL*HMAPHA
Trigger: TGCATGTGGAGCCATGTGGCACAAATACTCATGCCA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGTCCTGGGATTCTCTTaGTCGCTTTGGACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAVLGFS*SLWTLV
Trigger: CACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGAC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp GATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCCATACGTCCTGGGATTCTCTTaGTCGCTTTGGACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: DFRVHSVEVFWHGFCSPYVLGFS*SLWTLV
Trigger: CACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGAC...GTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGGTGCCTCACACATCTaGCCAATTGCATGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAGASHI*PIAWKP
Trigger: TGGCTTCCATGCAATTGGGCAGATGTGTGAGGCACC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp ATTCAGACTCCCCATCATGTGAGTCATCAGAACCTAACAGTTCATCACTTCTGGTCGGGTCACCACAGGTaGCTCACACATCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: IQTPHHVSHQNLTVHHFWSGHHR*LTHLPN
Trigger: ATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGA...CCAGAAGTGATGAACTGTTAGGTTCTGATGACTCACATGATGGGGAGTCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCTGGCACTGGTAGAGTaGTACACTGTCCAACACCCA +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCALALVE*YTVQHP
Trigger: TGGGTGTTGGACAGTGTAGCACTCTACCAGTGCCAG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTAGGCGTGAGCCACCATaGCCAGGTTTCAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCARREPP*PGFKFP
Trigger: AGGAAACTTGAAACCTGGGCATGGTGGCTCACGCCT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCCAAGGTTAGAGAGTTaGACACTGAGACTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSPRLES*TLRLVS
Trigger: GGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTTCCGTCAAATCGTGTaGCCCAGACTCTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAFRQIV*PRLFQL
Trigger: CAGCTGGAAGAGTCTGGGCCACACGATTTGACGGAA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCTTAGTTAAAGTGATGTaGTGTTTTCTGGCAAACTTG +
Preference number: 4 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCLVKVM*CFLANL
Trigger: CAAGTTTGCCAGAAAACACCACATCACTTTAACTAA...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCGCTTTGGACCTTGGTaGTTTCTTCCATTGACCACA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSRFGPW*FLPLTT
Trigger: TGTGGTCAATGGAAGAAACCACCAAGGTCCAAAGCG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCTGCACAACCACAATTaGGTGGACACCTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCALHNHN*VDTCAK
Trigger: CTTGGCACAGGTGTCCACCCAATTGTGGTTGTGCAG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTAGCCACCTGAGTAGCTaGGATTACAGGTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCASHLSS*DYRCPP
Trigger: TGGTGGACACCTGTAATCCCAGCTACTCAGGTGGCT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGCCCTTTCTTCTGGTTaGGAAGTTTCAGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSALSSG*EVSACK
Trigger: TTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp TGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTGCCACATGGCTCCATGTAATGAGCTGGCATaGGTATTTGTGCCACATGGC +
Preference number: 4 (lower is better)
Translates to: CCSHAVMSWHEYLCHMAPCNELA*VFVPHG
Trigger: GCCATGTGGCACAAATACTCATGCCAGCTCATTACA...TGGAGCCATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCATATTAAAGCCTCATaGGGATCACTGGCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSHIKAS*GSLASK
Trigger: CTTACTGGCCAGTGATCCTCATGAGGCTTTAATATG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp CCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTCATATTAAAGCCTCATaGGGATCACTGGCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: PLLCPQSSHSSKVRELDTHIKAS*GSLASK
Trigger: CTTACTGGCCAGTGATCCTCATGAGGCTTTAATATG...AGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGGTTTCTGCTGTGCCTaGCTGGCATTTGGTTGTACT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAGFCCA*LAFGCT
Trigger: AGTACAACCAAATGCCAGTCAGGCACAGCAGAAACC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGTTGCCAACACGAGCTaGCTCTGGGGCTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKVANTS*LWGSVF
Trigger: GAAGACAGAGCCCCAGAGTCAGCTCGTGTTGGCAAC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp TCTTCAGAAGGATCAGATTCAGGGTCATCAGAGAAGAGGCTGATTCCAGATTCCAGATTTCTAGCCCCCTaGAGATCTTTCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSEGSDSGSSEKRLIPDSRFLAP*RSFCPG
Trigger: CCCAGGACAGAAAGATCTTCAGGGGGCTAGAAATCT...GGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGACTCTCTGCCTTTGTaGACACAGGGTTTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSDSLPL*TQGFRE
Trigger: TTCTCTAAAACCCTGTGTTCACAAAGGCAGAGAGTC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCTCCACCTCCCGGGCTaGAGTGATTCTCCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKLHLPG*SDSPAL
Trigger: TAAGGCAGGAGAATCACTTCAGCCCGGGAGGTGGAG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp CCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTTTCTTTCTGTTCCAATaGACCAGAGCAGAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PLLCPQSSHSSKVRELDTFFLFQ*TRAEGE
Trigger: TTCACCCTCTGCTCTGGTTCATTGGAACAGAAAGAA...AGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642945.1
CDS-3UTR GCA 90 bp ATTCAGACTCCCCATCATGTGAGTCATCAGAACCTAACAGTTCATCACTTCTGGTGGATGCCTCTCAGCTaGACGCTTCTCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: IQTPHHVSHQNLTVHHFWWMPLS*TLLSGV
Trigger: AACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCA...CCAGAAGTGATGAACTGTTAGGTTCTGATGACTCACATGATGGGGAGTCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR GCA 90 bp CTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGTGGATGCCTCTCAGCTaGACGCTTCTCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LSCTLLSGVQIIITGLMMWMPLS*TLLSGV
Trigger: AACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCA...CATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp CTTTTCTGGATGCCTCTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTTGGATGCCTCTCAGCTaGACGCTTCTCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LFWMPLSCTLLSGVQIIIWMPLS*TLLSGV
Trigger: AACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCA...AATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTTCTTGGCTCCAGTTaGAGGTTCTTTACCTTCCAT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLLGSS*RFFTFH
Trigger: ATGGAAGGTAAAGAACCTGCAACTGGAGCCAAGAAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTTGGGGTTTTCAAATaGTGCACACTGACTCACACA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLGVFK*CTLTHT
Trigger: TGTGTGAGTCAGTGTGCAGCATTTGAAAACCCCAAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGAAGGCTGGCTCCCATaGTGTTCTAACACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAEGWLP*CSNTAS
Trigger: AGAAGCTGTGTTAGAACAGCATGGGAGCCAGCCTTC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TTACTTCCAGCCCATCTGTTATGTTGGCTCCTTGCTAAGCCAGGCTGTTTGCTTCTCCCAGAGCAACTGTaGATGTACCACCTATCATCT +
Preference number: 4 (lower is better)
Translates to: LLPAHLLCWLLAKPGCLLLPEQL*MYHLSS
Trigger: AGATGATAGGTGGTACATGCACAGTTGCTCTGGGAG...AAGCAAACAGCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGCTGGAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCACTCTGGGCAGATTCTaGAACTTTCAATTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSTLGRF*NFQLGN
Trigger: GTTCCCCAATTGAAAGTTGCAGAATCTGCCCAGAGT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGAAGGCCCTTTCTTCTaGTTGAGAAGTTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSEGPFF*LRSFSM
Trigger: CATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTCTGTAGAAGTCTTTTaGCACGGTTTCTGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSSVEVF*HGFCSP
Trigger: TGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp CAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTGAGACTGGTTTCCTGCCAAGGTTAGAGAGTTaGACACTGAGACTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: QSSHSSKVRELDTETGFLPRLES*TLRLVS
Trigger: GGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGG...CAGGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp ATTCAGACTCCCCATCATGTGAGTCATCAGAACCTAACAGTTCATCACTTCTGGGCCCATCTGTTATGTTaGCTCCTTGCTAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: IQTPHHVSHQNLTVHHFWAHLLC*LLAKPG
Trigger: GCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGC...CCAGAAGTGATGAACTGTTAGGTTCTGATGACTCACATGATGGGGAGTCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR CCA 90 bp CTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGGCCCATCTGTTATGTTaGCTCCTTGCTAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSCTLLSGVQIIITGLMMAHLLC*LLAKPG
Trigger: GCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGC...CATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGCTTGTTACTCTTCTTaGCTCCAGTTGCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSACYSS*LQLQVL
Trigger: AAGAACCTGCAACTGGAGCCAAGAAGAGTAACAAGC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp TCCAACACCCACTCTCGGGTCACCACAGGTGCCTCACACATCTGCCCAATTGCATTTGCCAATATTACCTaGTTACTGCAGTCATTTAAG +
Preference number: 4 (lower is better)
Translates to: SNTHSRVTTGASHICPIAFANIT*LLQSFK
Trigger: CTTAAATGACTGCAGTAACCAGGTAATATTGGCAAA...TGCAATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAGCAGAAAGGCCTTCTaGATTCTGGCTTATAGGGTA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSSRKAF*ILAYRV
Trigger: TACCCTATAAGCCAGAATCCAGAAGGCCTTTCTGCT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp GATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCCATACGAGCATAAATTCTTCTaGGGTCAGGCCAGACACCAC +
Preference number: 4 (lower is better)
Translates to: DFRVHSVEVFWHGFCSPYEHKFF*GQARHH
Trigger: GTGGTGTCTGGCCTGACCCCAGAAGAATTTATGCTC...GTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTTCTTTCTGTTCCAATaGACTTTACCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSFFLFQ*TLPRAE
Trigger: CTCTGCTCTGGGTAAAGTTCATTGGAACAGAAAGAA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp AGACTGGTTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGTGGAGACAGGTTCCTTaGTCAACTCCAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: RLVSCKEGFSGSLCRSLLWRQVP*STPDRW
Trigger: CCATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCA...CAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAACCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp CTTTTCTGGATGCCTCTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTTGGAGACAGGTTCCTTaGTCAACTCCAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: LFWMPLSCTLLSGVQIIIWRQVP*STPDRW
Trigger: CCATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCA...AATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp CTCACAGTTCCAAGGTTAGAGAGTTGGACACTGAGACTGGTTTCCTGCAAGGAAGCCCTTTCTTCTGGTTaGGAAGTTTCAGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: LTVPRLESWTLRLVSCKEALSSG*EVSACK
Trigger: TTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGC...TTCCTTGCAGGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp TTCTGTGCTGGGAGTCCGCCTATCATTACATGTTTCCTTACTTCCAGCCCATCTTCATCCCTGGTTCCTTaGGGGGTGATTTGTAACAAT +
Preference number: 4 (lower is better)
Translates to: FCAGSPPIITCFLTSSPSSSLVP*GVICNN
Trigger: ATTGTTACAAATCACCCCTCAAGGAACCAGGGATGA...AGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp CTCACAGTTCCAAGGTTAGAGAGTTGGACACTGAGACTGGTTTCCTGCAAGGAAGAAACAGAACTACCCTaGTACTTTTCTGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: LTVPRLESWTLRLVSCKEETELP*YFSGCL
Trigger: GAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTC...TTCCTTGCAGGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTCCACATGCAAGTTTaGAACAGAACTACCCTGATA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLHMQV*NRTTLI
Trigger: TATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTGTAATGAGCTGGCATaGGTATTTGTGCCACATGGC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCACNELA*VFVPHG
Trigger: GCCATGTGGCACAAATACTCATGCCAGCTCATTACA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp CTGAGACTGGTTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTGTAATGAGCTGGCATaGGTATTTGTGCCACATGGC +
Preference number: 4 (lower is better)
Translates to: LRLVSCKEGFSGSLCRSLCNELA*VFVPHG
Trigger: GCCATGTGGCACAAATACTCATGCCAGCTCATTACA...AAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp ATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACAATCTCTAGGATTCTCTaGGCATGGCAGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: IRCFVLRVLTVPRLESWTISRIL*AWQFLL
Trigger: AAGCAGAAACTGCCATGCTCAGAGAATCCTAGAGAT...TGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR TCA 90 bp TTCTGTGCTGGGAGTCCGCCTATCATTACATGTTTCCTTACTTCCAGCCCATCTATAAAATCCTCAGGATaGAGGCCTGATGTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: FCAGSPPIITCFLTSSPSIKSSG*RPDVGL
Trigger: GAGACCTACATCAGGCCTTCATCCTGAGGATTTTAT...AGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGGCTTAGATTTCTACTaGCTACTAGTTCAAGCGCAT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSGLDFY*LLVQAH
Trigger: ATGCGCTTGAACTAGTAGTCAGTAGAAATCTAAGCC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp AAGCCATTGTCCTCTGTCCAGGCATCTGGCTGCACAACCACAATTGGGTGGACAGTATTCTGCAAATACTaGGCATCAAGTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: KPLSSVQASGCTTTIGWTVFCKY*ASSSLS
Trigger: AGAAAGTGAACTTGATGCTCAGTATTTGCAGAATAC...TGTCCACCCAATTGTGGTTGTGCAGCCAGATGCCTGGACAGAGGACAATGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCAGTTTCGTTGCCTCTaGACTGAGATGATAGACAAA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSQFRCL*TEMIDK
Trigger: TTTGTCTATCATCTCAGTTCAGAGGCAACGAAACTG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCAATTCACTGCACTGTaGAGAAAACAAGCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSQFTAL*RKQASR
Trigger: TCTGCTAGCTTGTTTTCTTCACAGTGCAGTGAATTG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCCCTGGCTTTCAGACTaGTGCCTCATTTGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAPWLSD*CLICLE
Trigger: TTCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCTGTGGGCATGTTGGTaGAGGGCCCATAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKLWACW*RAHSNR
Trigger: TCTGTTGCTATGGGCCCTTCACCAACATGCCCACAG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCTGTGGGCATGTTGGTaGAGGGCCCATAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPLWACW*RAHSNR
Trigger: TCTGTTGCTATGGGCCCTTCACCAACATGCCCACAG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTGGCATGAGTATTTGTaGCACATGGCTCCACATGCA +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAWHEYL*HMAPHA
Trigger: TGCATGTGGAGCCATGTGGCACAAATACTCATGCCA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp CTGAGACTGGTTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTGGCATGAGTATTTGTaGCACATGGCTCCACATGCA +
Preference number: 4 (lower is better)
Translates to: LRLVSCKEGFSGSLCRSLWHEYL*HMAPHA
Trigger: TGCATGTGGAGCCATGTGGCACAAATACTCATGCCA...AAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp CTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTGAGACTGGTTTCCCTTGGGGTTTTCAAATaGTGCACACTGACTCACACA +
Preference number: 4 (lower is better)
Translates to: LRVLTVPRLESWTLRLVSLGVFK*CTLTHT
Trigger: TGTGTGAGTCAGTGTGCAGCATTTGAAAACCCCAAG...GGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAACCACAGGAAAGCCTaGAGTGATATTAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSNHRKA*SDINCL
Trigger: CAGACAGTTAATATCACTGCAGGCTTTCCTGTGGTT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAGAACAAACCTGAGATaGATGACTACTTCCCATAGG +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSRTNLR*MTTSHR
Trigger: CCTATGGGAAGTAGTCATGCATCTCAGGTTTGTTCT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGTGATGTTCCTGAGATaGCTTTGCCAATATTACCTG +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSVMFLR*LCQYYL
Trigger: CAGGTAATATTGGCAAAGGCATCTCAGGAACATCAC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAGTTCAGCCATTTCCTaGTGGAGCTTTATCAGGTTA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSSSAIS*WSFIRL
Trigger: TAACCTGATAAAGCTCCAGCAGGAAATGGCTGAACT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCACTGGTAGAACTATCTaGAGACACCTCAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSTGRTI*RHLKLV
Trigger: GACAAGTTTGAGGTGTCTGCAGATAGTTCTACCAGT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTCGGGTCACCACAGGTaGCTCACACATCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKSGHHR*LTHLPN
Trigger: ATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTCGGGTCACCACAGGTaGCTCACACATCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPSGHHR*LTHLPN
Trigger: ATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCCAACATTTGAGAACTaGCCAAGGACTATTCTGACT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSPTFEN*PRTILT
Trigger: AGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTACTCTCACACCCAGATaGTGCTTCACCCTGATACTT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCATLTPR*CFTLIL
Trigger: AAGTATCAGGGTGAAGCAGCATCTGGGTGTGAGAGT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468300.5
CDS-3UTR CCA 90 bp GTTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGGAAGGCCCTTTCTTCTaGTTGAGAAGTTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: VSCKEGFSGSLCRSLLAREGPFF*LRSFSM
Trigger: CATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTC...CCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp TTACTTCCAGCCCATCTGTTATGTTGGCTCCTTGCTAAGCCAGGCTGTTTGCTTGAAGGCCCTTTCTTCTaGTTGAGAAGTTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: LLPAHLLCWLLAKPGCLLEGPFF*LRSFSM
Trigger: CATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTC...AAGCAAACAGCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGCTGGAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp AGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCCAAGGTTAGAGAGTTaGACACTGAGACTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: RKDFRVHSVEVFWHGFCSPRLES*TLRLVS
Trigger: GGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGG...GCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461221.5
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp GCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTCCAAGGTTAGAGAGTTaGACACTGAGACTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: ARKDFRVHSVEVFWHGFCPRLES*TLRLVS
Trigger: GGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGG...ACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp GCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGGATGCCTCTACCCTGATACTTTTCTaGATGCCTCTCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: APHASLKQNYPDTFLDASTLILF*MPLSCT
Trigger: CGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGT...AGAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTTACATGGCTTAAGTTaGGGAGGCTTGCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCALHGLS*GGLPSS
Trigger: GGAAGAAGGCAAGCCTCCCCAACTTAAGCCATGTAA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp TTACTTCCAGCCCATCTGTTATGTTGGCTCCTTGCTAAGCCAGGCTGTTTGCTTGCTTGTTACTCTTCTTaGCTCCAGTTGCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: LLPAHLLCWLLAKPGCLLACYSS*LQLQVL
Trigger: AAGAACCTGCAACTGGAGCCAAGAAGAGTAACAAGC...AAGCAAACAGCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGCTGGAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCCAAATAACAAGTGTTaGAAGCAGGGAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSPNNKC*KQGSSS
Trigger: TGAAGAGCTTCCCTGCTTCCAACACTTGTTATTTGG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTATCCCTCTGCTGAGTaGTTAAAATGTCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSYPSAE*LKCHSE
Trigger: CTCAGAGTGACATTTTAACCACTCAGCAGAGGGATA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCAGGTTATGTTGCATaGTATCCCTCTGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCASGYVA*YPSAEW
Trigger: CCACTCAGCAGAGGGATACCATGCAACATAACCTGA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTCAGCCATTTCCTGCTaGAGCTTTATCAGGTTATGT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSSAISC*SFIRLC
Trigger: ACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAGGCCTTCTGGATTCTaGCTTATAGGGTATTCACTA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSRPSGF*LIGYSL
Trigger: TAGTGAATACCCTATAAGCCAGAATCCAGAAGGCCT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCGCTTTGGACCTTGGTaGTTTCTTCCATTGACCACA +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCARFGPW*FLPLTT
Trigger: TGTGGTCAATGGAAGAAACCACCAAGGTCCAAAGCG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTTCTCTTGCTCGCTTTaGACCTTGGTGGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAFSCSL*TLVVSS
Trigger: GGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp CTTTTGAGGTTGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTTTCTCTTGCTCGCTTTaGACCTTGGTGGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LLRLYPLLCPQSSHSSKVFSCSL*TLVVSS
Trigger: GGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAA...AACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAAGATCTTTCTGTCCTaGGATTCTCTTGCTCGCTTT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSKIFLS*DSLARF
Trigger: AAAGCGAGCAAGAGAATCCCAGGACAGAAAGATCTT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp ATAAACTGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTGCCACATGACAACCACAATTGGGTaGACACCTGTGCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: INCCSHAVMSWHEYLCHMTTTIG*TPVPRV
Trigger: CACCCTTGGCACAGGTGTCCACCCAATTGTGGTTGT...CATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCAACAGCTTCCTTCCTaGTGGGATCTGTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSQQLPS*WDLSFY
Trigger: ATAAAATGACAGATCCCACCAGGAAGGAAGCTGTTG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
3UTR CAA 72 bp CAGACCAACTCCCTGGCTTTCAGACTGATGCCTCATTaGTTTGGAAGAACCAATCAAGAAAGGATCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QTNSLAFRLMPH*FGRTNQERILG
Trigger: ACCCAGGATCCTTTCTTGATTGGTTCTTCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGGAGTTGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTGGTTCCTTGAGGGGTaGTTTGTAACAATTCTTGAT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSWFLEG*FVTILD
Trigger: ATCAAGAATTGTTACAAATCACCCCTCAAGGAACCA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCATCCCTGGTTCCTTaGGGGGTGATTTGTAACAAT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCASSLVP*GVICNN
Trigger: ATTGTTACAAATCACCCCTCAAGGAACCAGGGATGA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp CTGAGACTGGTTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTCATCCCTGGTTCCTTaGGGGGTGATTTGTAACAAT +
Preference number: 4 (lower is better)
Translates to: LRLVSCKEGFSGSLCRSLSSLVP*GVICNN
Trigger: ATTGTTACAAATCACCCCTCAAGGAACCAGGGATGA...AAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGAAACAGAACTACCCTaGTACTTTTCTGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAETELP*YFSGCL
Trigger: GAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp CTTTTGAGGTTGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTGAAACAGAACTACCCTaGTACTTTTCTGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: LLRLYPLLCPQSSHSSKVETELP*YFSGCL
Trigger: GAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTC...AACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp AGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCGAAACAGAACTACCCTaGTACTTTTCTGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: RKDFRVHSVEVFWHGFCSETELP*YFSGCL
Trigger: GAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTC...GCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp TCTTCAGAAGGATCAGATTCAGGGTCATCAGAGAAGAGGCTGATTCCAGATTCCATCTCTAGGATTCTCTaGGCATGGCAGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SSEGSDSGSSEKRLIPDSISRIL*AWQFLL
Trigger: AAGCAGAAACTGCCATGCTCAGAGAATCCTAGAGAT...GGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTAGCTACTTTGGCATTTaGTTCAGACTCCCCATCATG +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCASYFGI*FRLPIM
Trigger: CATGATGGGGAGTCTGAATCAAATGCCAAAGTAGCT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCATTTCAGGAGTCTTTTaGACTGCCAAATCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSISGVF*TAKSAF
Trigger: GAAAGCAGATTTGGCAGTTCAAAAGACTCCTGAAAT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp TGCCTGGTAGAAGACTTCCTCCTCAGCCTATTCTTTTTAGGTGCTTTTGAATTGGGTTTCTGCTGTGCCTaGCTGGCATTTGGTTGTACT +
Preference number: 4 (lower is better)
Translates to: CLVEDFLLSLFFLGAFELGFCCA*LAFGCT
Trigger: AGTACAACCAAATGCCAGTCAGGCACAGCAGAAACC...CAATTCAAAAGCACCTAAAAAGAATAGGCTGAGGAGGAAGTCTTCTACCAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGGCGCTTTGAAACCTTaGATGTATTCTGCAAATACT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSGALKP*MYSANT
Trigger: AGTATTTGCAGAATACATTCAAGGTTTCAAAGCGCC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCGCAGTATCAGTAGTATaGGCAGCAGCTGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPAVSVV*AAAGLW
Trigger: CCAGAGTCCAGCTGCTGCTCATACTACTGATACTGC...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTAAGCCAACAACAGCCTaGATAGAAAGAATAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAKPTTA*IERIGL
Trigger: CAGCCCTATTCTTTCTATTCAGGCTGTTGTTGGCTT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGAACCAGCTATTCTCTTaGGGCCAAGCCACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKNQLFS*GQATLC
Trigger: GCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAACCAGCTATTCTCTTaGGGCCAAGCCACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPNQLFS*GQATLC
Trigger: GCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGACTCTCTGCCTTTGTaGACACAGGGTTTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCADSLPL*TQGFRE
Trigger: TTCTCTAAAACCCTGTGTTCACAAAGGCAGAGAGTC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCTGGTTTCGAACTCCTaGCCTCCAGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDLVSNS*PPVICP
Trigger: TGGGCAGATCACTGGAGGTCAGGAGTTCGAAACCAG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp GCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTTTCTTTCTGTTCCAATaGACCAGAGCAGAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: ARKDFRVHSVEVFWHGFCFFLFQ*TRAEGE
Trigger: TTCACCCTCTGCTCTGGTTCATTGGAACAGAAAGAA...ACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461798.5
ENST00000642945.1
CDS-3UTR TCA 90 bp CTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGAGCTACTTGAGGGGCTaGGATGAGAGATTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: LSCTLLSGVQIIITGLMMSYLRG*DERLLE
Trigger: TTCAAGCAATCTCTCATCTCAGCCCCTCAAGTAGCT...CATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642945.1
CDS-3UTR GCA 90 bp ATGGCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGGATGCCCTGAGACTGGTTTCCTaGAAGGAAGGATTTTCGGGT +
Preference number: 4 (lower is better)
Translates to: MAPHASLKQNYPDTFLDALRLVS*KEGFSG
Trigger: ACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAG...GGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp AGACTGGTTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGCTGAGACTGGTTTCCTaGAAGGAAGGATTTTCGGGT +
Preference number: 4 (lower is better)
Translates to: RLVSCKEGFSGSLCRSLLLRLVS*KEGFSG
Trigger: ACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAG...CAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAACCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCTGGATGCCTCTCAGCTaGACGCTTCTCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSWMPLS*TLLSGV
Trigger: AACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCA...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTGGATGCCTCTCAGCTaGACGCTTCTCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKWMPLS*TLLSGV
Trigger: AACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAGATACTTTCCTGAGTaGCATAATCAGTACCAGGTA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSRYFPE*HNQYQV
Trigger: TACCTGGTACTGATTATGGCACTCAGGAAAGTATCT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTTTCTTCCATTTCTATaGTTGTTTCCCGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSFLPFL*LFPDCG
Trigger: ACCACAGTCGGGAAACAAGCATAGAAATGGAAGAAA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGTGGGCAGAGAATGTTaGACATTCCTCTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAVGREC*TFLFCI
Trigger: AATGCAGAAGAGGAATGTGCAACATTCTCTGCCCAC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTTCCTGAGATGCCTTTaGCAATATTACCTGGTTACT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSFLRCL*QYYLVT
Trigger: AGTAACCAGGTAATATTGGCAAAGGCATCTCAGGAA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AGATCCCAATTCAATGTAGACAGACGTCTTTTGAGGTTGTATCCGCTGCTTTGTGAAGGCTGGCTCCCATaGTGTTCTAACACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RSQFNVDRRLLRLYPLLCEGWLP*CSNTAS
Trigger: AGAAGCTGTGTTAGAACAGCATGGGAGCCAGCCTTC...ACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAATTGGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTTGAAGATGGTATGTTaGCAACACGAGCTGACTCTG +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCALKMVC*QHELTL
Trigger: CAGAGTCAGCTCGTGTTGGCAACATACCATCTTCAA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTACTCTGGGCAGATTCTaGAACTTTCAATTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCATLGRF*NFQLGN
Trigger: GTTCCCCAATTGAAAGTTGCAGAATCTGCCCAGAGT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGTCCTGGGATTCTCTTaGTCGCTTTGGACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKVLGFS*SLWTLV
Trigger: CACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGAC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCGTCCTGGGATTCTCTTaGTCGCTTTGGACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPVLGFS*SLWTLV
Trigger: CACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGAC...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGGTGCCTCACACATCTaGCCAATTGCATGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKGASHI*PIAWKP
Trigger: TGGCTTCCATGCAATTGGGCAGATGTGTGAGGCACC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCGGTGCCTCACACATCTaGCCAATTGCATGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPGASHI*PIAWKP
Trigger: TGGCTTCCATGCAATTGGGCAGATGTGTGAGGCACC...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCTGGCACTGGTAGAGTaGTACACTGTCCAACACCCA +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPLALVE*YTVQHP
Trigger: TGGGTGTTGGACAGTGTAGCACTCTACCAGTGCCAG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TCTGCAACTTTCAATTGGGGAACTTTCAATGCAGAGGTTGAAGATGGTATGTTGCTGGCACTGGTAGAGTaGTACACTGTCCAACACCCA +
Preference number: 4 (lower is better)
Translates to: SATFNWGTFNAEVEDGMLLALVE*YTVQHP
Trigger: TGGGTGTTGGACAGTGTAGCACTCTACCAGTGCCAG...CAACATACCATCTTCAACCTCTGCATTGAAAGTTCCCCAATTGAAAGTTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAGGCGTGAGCCACCATaGCCAGGTTTCAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPRREPP*PGFKFP
Trigger: AGGAAACTTGAAACCTGGGCATGGTGGCTCACGCCT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCTGTAGAAGTCTTTTaGCACGGTTTCTGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCASVEVF*HGFCSP
Trigger: TGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTGCACGCTTCTCAGTaGTGTTCAAATCATTATTAC +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLHASQ*CSNHYY
Trigger: GTAATAATGATTTGAACACCACTGAGAAGCGTGCAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp CCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTCTGCACGCTTCTCAGTaGTGTTCAAATCATTATTAC +
Preference number: 4 (lower is better)
Translates to: PLLCPQSSHSSKVRELDTLHASQ*CSNHYY
Trigger: GTAATAATGATTTGAACACCACTGAGAAGCGTGCAG...AGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp CTGAGACTGGTTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTCATGCTGTAATGAGCTaGCATGAGTATTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LRLVSCKEGFSGSLCRSLHAVMS*HEYLCH
Trigger: GTGGCACAAATACTCATGCCAGCTCATTACAGCATG...AAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp ATTCAGACTCCCCATCATGTGAGTCATCAGAACCTAACAGTTCATCACTTCTGGTTACATGGCTTAAGTTaGGGAGGCTTGCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: IQTPHHVSHQNLTVHHFWLHGLS*GGLPSS
Trigger: GGAAGAAGGCAAGCCTCCCCAACTTAAGCCATGTAA...CCAGAAGTGATGAACTGTTAGGTTCTGATGACTCACATGATGGGGAGTCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTCTTGTATTATCTGTaGCTCAGTAACAAATGCTCC +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLLYYL*LSNKCS
Trigger: GGAGCATTTGTTACTGAGCCACAGATAATACAAGAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp ATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTTGTTTCCCGACTGTaGTTAACTTCATGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: IRCFVLRVLTVPRLESWTLVSRL*LTSCPN
Trigger: ATTGGGACATGAAGTTAACCACAGTCGGGAAACAAG...TGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTTGATGGGAAAAAGTaGTGGTATACGATATGGGTT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLDGKK*WYTIWV
Trigger: AACCCATATCGTATACCACCACTTTTTCCCATCAAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp ATGGCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGGATGCCAGGACTCTAATTTCTTaGCCCCTCTTCGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: MAPHASLKQNYPDTFLDARTLIS*PLFGNP
Trigger: AGGGTTACCGAAGAGGGGCCAAGAAATTAGAGTCCT...GGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp CTTTTGAGGTTGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGCAGAAAGGCCTTCTaGATTCTGGCTTATAGGGTA +
Preference number: 4 (lower is better)
Translates to: LLRLYPLLCPQSSHSSKVSRKAF*ILAYRV
Trigger: TACCCTATAAGCCAGAATCCAGAAGGCCTTTCTGCT...AACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTTCCGTCAAATCGTGTaGCCCAGACTCTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPFRQIV*PRLFQL
Trigger: CAGCTGGAAGAGTCTGGGCCACACGATTTGACGGAA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGACAACCACAATTGGGTaGACACCTGTGCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKTTTIG*TPVPRV
Trigger: CACCCTTGGCACAGGTGTCCACCCAATTGTGGTTGT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCTGCACAACCACAATTaGGTGGACACCTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKLHNHN*VDTCAK
Trigger: CTTGGCACAGGTGTCCACCCAATTGTGGTTGTGCAG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGAGCCACCTGAGTAGCTaGGATTACAGGTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKSHLSS*DYRCPP
Trigger: TGGTGGACACCTGTAATCCCAGCTACTCAGGTGGCT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAGCCACCTGAGTAGCTaGGATTACAGGTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPSHLSS*DYRCPP
Trigger: TGGTGGACACCTGTAATCCCAGCTACTCAGGTGGCT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
3UTR CAA 72 bp TGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTaGGACACTGAGACTGGTTTCCAAGGAAGGATTTTC +
Preference number: 4 (lower is better)
Translates to: CPQSSHSSKVRE*DTETGFQGRIF
Trigger: GAAAATCCTTCCTTGGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CAA 72 bp TGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTaGTGCCACATGGCTCCACATGCAAGTTTGAAACAG +
Preference number: 4 (lower is better)
Translates to: CCSHAVMSWHEY*CHMAPHASLKQ
Trigger: CTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTGGAGACAGGTTCCTTaGTCAACTCCAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPWRQVP*STPDRW
Trigger: CCATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTGGAGACAGGTTCCTTaGTCAACTCCAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKWRQVP*STPDRW
Trigger: CCATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp ATGGCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGGATGCCGCCCTTTCTTCTGGTTaGGAAGTTTCAGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: MAPHASLKQNYPDTFLDAALSSG*EVSACK
Trigger: TTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGC...GGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp TGCCACATGGCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGGCCCTTTCTTCTGGTTaGGAAGTTTCAGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: CHMAPHASLKQNYPDTFLALSSG*EVSACK
Trigger: TTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGC...CAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAGCTCTTCAACAAGTTaGCTAAATCTCGTACTTTCT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSSSSTS*LNLVLS
Trigger: AGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp CGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTGAAACCTGTGTCAAGCTaGAAAGCACAAATGATTTTC +
Preference number: 4 (lower is better)
Translates to: RCFVLRVLTVPRLESWTLKPVSS*KAQMIF
Trigger: GAAAATCATTTGTGCTTTTCAGCTTGACACAGGTTT...CAGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp ATAAACTGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTGCCACATGTGTAATGAGCTGGCATaGGTATTTGTGCCACATGGC +
Preference number: 4 (lower is better)
Translates to: INCCSHAVMSWHEYLCHMCNELA*VFVPHG
Trigger: GCCATGTGGCACAAATACTCATGCCAGCTCATTACA...CATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGCTTTAATTTATTTGTaGGGGGACGCTCTTGTATTA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSALIYL*GDALVL
Trigger: TAATACAAGAGCGTCCCCTCACAAATAAATTAAAGC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCTCAGGATGAAGGCCTaGTGTAGGTCTCCTTTTACG +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKLRMKA*CRSPFT
Trigger: CGTAAAAGGAGACCTACATCAGGCCTTCATCCTGAG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGTAATATTCATCACTTaGCCATTCTGCTCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAVIFIT*PFCSVW
Trigger: CCAAACGGAGCAGAATGGTCAAGTGATGAATATTAC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp TTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCCATACTTTACTAGTTCAAGCGCATaGATATGCCTGGTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: FRVHSVEVFWHGFCSPYFTSSSA*ICLVED
Trigger: GTCTTCTACCAGGCATATTCATGCGCTTGAACTAGT...AAAGTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCGGTTTCTGCTGTGCCTaGCTGGCATTTGGTTGTACT +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSGFCCA*LAFGCT
Trigger: AGTACAACCAAATGCCAGTCAGGCACAGCAGAAACC...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGGTTTCTGCTGTGCCTaGCTGGCATTTGGTTGTACT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKGFCCA*LAFGCT
Trigger: AGTACAACCAAATGCCAGTCAGGCACAGCAGAAACC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTAGTACCAGGTACCAATaGAATACTGCTACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCASTRYQ*NTATLY
Trigger: GTAGAGAGTAGCAGTATTTCATTGGTACCTGGTACT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCTTTGGAACAACCATaGATTAGTCCCTTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCASLEQP*ISPLGF
Trigger: AAACCCCAAGGGACTAATTCATGGTTGTTCCAAAGA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTATGCCTAGTAGACTaGGAAGGTATATTGTTTACT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLCLVD*EGILFT
Trigger: AGTAAACAATATACCTTCTCAGTCTACTAGGCATAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCAATTCACTGCACTGTaGAGAAAACAAGCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAQFTAL*RKQASR
Trigger: TCTGCTAGCTTGTTTTCTTCACAGTGCAGTGAATTG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp CAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGTTCCCTGGCTTTCAGACTaGTGCCTCATTTGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: QLHASQWCSNHYYWVDDVPWLSD*CLICLE
Trigger: TTCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGG...AACATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTCTTTCTTCATCATCTaGAACCAATTCCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSSFFII*NQFLVT
Trigger: AGTGACAAGGAATTGGTTTCAGATGATGAAGAAAGA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTTTCAATGCAGAGGTTaGAGATGGTATGTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAFQCRG*RWYVAN
Trigger: GTTGGCAACATACCATCTTCAACCTCTGCATTGAAA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGCAGTATCAGTAGTATaGGCAGCAGCTGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDAVSVV*AAAGLW
Trigger: CCAGAGTCCAGCTGCTGCTCATACTACTGATACTGC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAGATTTCTAGCCCCCTaGAGATCTTTCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPRFLAP*RSFCPG
Trigger: CCCAGGACAGAAAGATCTTCAGGGGGCTAGAAATCT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCACCATCCATTCCAGTTaGTCTGTGGGCATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPTIHSS*SVGMLV
Trigger: CACCAACATGCCCACAGATCAACTGGAATGGATGGT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTGGATGCCTCTCAGCTaGACGCTTCTCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDWMPLS*TLLSGV
Trigger: AACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR GCA 90 bp ATGAGCTGGCATGAGTATTTGTGCCACATGGCTCCACATGCAAGTTTGAAACAGCCACATGGCTCCACATaGAAGTTTGAAACAGAACTA +
Preference number: 4 (lower is better)
Translates to: MSWHEYLCHMAPHASLKQPHGST*KFETEL
Trigger: TAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGG...CTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCAGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp GCAGTTTCTGCTTATTCCATTCTTTTCTCTCACACAGGGGATCAGCATTCAGATTGGCATGAGTATTTGTaGCACATGGCTCCACATGCA +
Preference number: 4 (lower is better)
Translates to: AVSAYSILFSHTGDQHSDWHEYL*HMAPHA
Trigger: TGCATGTGGAGCCATGTGGCACAAATACTCATGCCA...ATCTGAATGCTGATCCCCTGTGTGAGAGAAAAGAATGGAATAAGCAGAAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTAAGCCAGGCTGTTTaGTTTTATTACAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLSQAV*FYYRIQ
Trigger: CTGAATTCTGTAATAAAAGCAAACAGCCTGGCTTAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGGGGTTTTCAAATGCTaGACACTGACTCACACATTT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAGVFKC*TLTHTF
Trigger: AAATGTGTGAGTCAGTGTGCAGCATTTGAAAACCCC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGTGATGTTCCTGAGATaGCTTTGCCAATATTACCTG +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAVMFLR*LCQYYL
Trigger: CAGGTAATATTGGCAAAGGCATCTCAGGAACATCAC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTAGTTCAGCCATTTCCTaGTGGAGCTTTATCAGGTTA +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCASSAIS*WSFIRL
Trigger: TAACCTGATAAAGCTCCAGCAGGAAATGGCTGAACT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGAAGGCTGGCTCCCATaGTGTTCTAACACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKEGWLP*CSNTAS
Trigger: AGAAGCTGTGTTAGAACAGCATGGGAGCCAGCCTTC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTACTGGTAGAACTATCTaGAGACACCTCAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCATGRTI*RHLKLV
Trigger: GACAAGTTTGAGGTGTCTGCAGATAGTTCTACCAGT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGTCCTGGGATTCTCTTaGTCGCTTTGGACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDVLGFS*SLWTLV
Trigger: CACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGAC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGGTGCCTCACACATCTaGCCAATTGCATGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDGASHI*PIAWKP
Trigger: TGGCTTCCATGCAATTGGGCAGATGTGTGAGGCACC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp GGTACCAATGAAATACTGCTACTCTCTACAGATCTTTCAGTTTGCAAAACCCTTGGTGCCTCACACATCTaGCCAATTGCATGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GTNEILLLSTDLSVCKTLGASHI*PIAWKP
Trigger: TGGCTTCCATGCAATTGGGCAGATGTGTGAGGCACC...AAGGGTTTTGCAAACTGAAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCTGGCACTGGTAGAGTaGTACACTGTCCAACACCCA +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDLALVE*YTVQHP
Trigger: TGGGTGTTGGACAGTGTAGCACTCTACCAGTGCCAG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCCAACATTTGAGAACTaGCCAAGGACTATTCTGACT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAPTFEN*PRTILT
Trigger: AGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGCTACCAAGTTTATTTaGAGTGTTAACAGCACAACA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSATKFI*SVNSTT
Trigger: TGTTGTGCTGTTAACACTGCAAATAAACTTGGTAGC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp CTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGTCTGTAGAAGTCTTTTaGCACGGTTTCTGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: LSCTLLSGVQIIITGLMMSVEVF*HGFCSP
Trigger: TGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGA...CATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCACCCTGATACTTTTCTaGATGCCTCTCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPTLILF*MPLSCT
Trigger: CGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGCCCATCTGTTATGTTaGCTCCTTGCTAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDAHLLC*LLAKPG
Trigger: GCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp CTTTTGAGGTTGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTTCTGCTGTGCCTGACTaGCATTTGGTTGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: LLRLYPLLCPQSSHSSKVSAVPD*HLVVLF
Trigger: AAAAAGTACAACCAAATGCCAGTCAGGCACAGCAGA...AACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCATGAATTAGTCCCTTaGGGTTTTCAAATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAHELVP*GFQMLH
Trigger: GTGCAGCATTTGAAAACCCCAAGGGACTAATTCATG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTAACGGAGCAAATGACTaGCGCTTTGAAACCTTGAAT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCANGAND*RFETLN
Trigger: ATTCAAGGTTTCAAAGCGCCAGTCATTTGCTCCGTT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp TTACTTCCAGCCCATCTGTTATGTTGGCTCCTTGCTAAGCCAGGCTGTTTGCTTTGTGCTCACTGTACTTaGAATGTTCTCATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LLPAHLLCWLLAKPGCLLCAHCT*NVLISH
Trigger: ATGGGAAATGAGAACATTCCAAGTACAGTGAGCACA...AAGCAAACAGCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGCTGGAAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCAGCCATTTCCTGCTaGAGCTTTATCAGGTTATGT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCASAISC*SFIRLC
Trigger: ACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTTCCGTCAAATCGTGTaGCCCAGACTCTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDFRQIV*PRLFQL
Trigger: CAGCTGGAAGAGTCTGGGCCACACGATTTGACGGAA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCGAGCATAAATTCTTCTaGGGTCAGGCCAGACACCAC +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPEHKFF*GQARHH
Trigger: GTGGTGTCTGGCCTGACCCCAGAAGAATTTATGCTC...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp TGCCTGGTAGAAGACTTCCTCCTCAGCCTATTCTTTTTAGGTGCTTTTGAATTGCGCTTTGGACCTTGGTaGTTTCTTCCATTGACCACA +
Preference number: 4 (lower is better)
Translates to: CLVEDFLLSLFFLGAFELRFGPW*FLPLTT
Trigger: TGTGGTCAATGGAAGAAACCACCAAGGTCCAAAGCG...CAATTCAAAAGCACCTAAAAAGAATAGGCTGAGGAGGAAGTCTTCTACCAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp TTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTGAGACTGAAGATCTTTCTGTCCTaGGATTCTCTTGCTCGCTTT +
Preference number: 4 (lower is better)
Translates to: FVLRVLTVPRLESWTLRLKIFLS*DSLARF
Trigger: AAAGCGAGCAAGAGAATCCCAGGACAGAAAGATCTT...CAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATACAACCACAATTGGGTaGACACCTGTGCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDTTTIG*TPVPRV
Trigger: CACCCTTGGCACAGGTGTCCACCCAATTGTGGTTGT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCTGCACAACCACAATTaGGTGGACACCTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDLHNHN*VDTCAK
Trigger: CTTGGCACAGGTGTCCACCCAATTGTGGTTGTGCAG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp TGCCTGGTAGAAGACTTCCTCCTCAGCCTATTCTTTTTAGGTGCTTTTGAATTGATCTGCCCAATTGCATaGAAGCCATTGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: CLVEDFLLSLFFLGAFELICPIA*KPLSSV
Trigger: GACAGAGGACAATGGCTTCCATGCAATTGGGCAGAT...CAATTCAAAAGCACCTAAAAAGAATAGGCTGAGGAGGAAGTCTTCTACCAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAGCCACCTGAGTAGCTaGGATTACAGGTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDSHLSS*DYRCPP
Trigger: TGGTGGACACCTGTAATCCCAGCTACTCAGGTGGCT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
3UTR CAA 72 bp AGATCCCAATTCAATGTAGACAGACGTCTTTTGAGGTaGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: RSQFNVDRRLLR*YPLLCPQSSHS
Trigger: ACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAATTGGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR CAA 72 bp CATGAGTATTTGTGCCACATGGCTCCACATGCAAGTTaGAAACAGAACTACCCTGATACTTTTCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: HEYLCHMAPHAS*KQNYPDTFLDA
Trigger: GGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR CAA 72 bp TTGCTCCTCCACATCAACAACCTTAATGAGCTCCTCTaGAGATGGGTAGTTTCTATTCTGAAGACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LLLHINNLNELL*RWVVSILKTPR
Trigger: TCTGGGAGTCTTCAGAATAGAAACTACCCATCTCAAGAGGAGCTCATTAAGGTTGTTGATGTGGAGGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp TGCCACATGGCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGTTCTTTCTGTTCCAATaGACTTTACCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: CHMAPHASLKQNYPDTFLFFLFQ*TLPRAE
Trigger: CTCTGCTCTGGGTAAAGTTCATTGGAACAGAAAGAA...CAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492859.5
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTGGAGACAGGTTCCTTaGTCAACTCCAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDWRQVP*STPDRW
Trigger: CCATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTGGTTCCTTGAGGGGTaGTTTGTAACAATTCTTGAT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAWFLEG*FVTILD
Trigger: ATCAAGAATTGTTACAAATCACCCCTCAAGGAACCA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp TTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTGGTTCCTTGAGGGGTaGTTTGTAACAATTCTTGAT +
Preference number: 4 (lower is better)
Translates to: FPARKDFRVHSVEVFWHGWFLEG*FVTILD
Trigger: ATCAAGAATTGTTACAAATCACCCCTCAAGGAACCA...ACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp CTTTTCTGGATGCCTCTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTCTCCACATGCAAGTTTaGAACAGAACTACCCTGATA +
Preference number: 4 (lower is better)
Translates to: LFWMPLSCTLLSGVQIIILHMQV*NRTTLI
Trigger: TATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAG...AATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCAGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp ATAAACTGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTGCCACATGAGCTACTTTGGCATTTaGTTCAGACTCCCCATCATG +
Preference number: 4 (lower is better)
Translates to: INCCSHAVMSWHEYLCHMSYFGI*FRLPIM
Trigger: CATGATGGGGAGTCTGAATCAAATGCCAAAGTAGCT...CATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR TCA 90 bp GGTACCAATGAAATACTGCTACTCTCTACAGATCTTTCAGTTTGCAAAACCCTTCTCAGGATGAAGGCCTaGTGTAGGTCTCCTTTTACG +
Preference number: 4 (lower is better)
Translates to: GTNEILLLSTDLSVCKTLLRMKA*CRSPFT
Trigger: CGTAAAAGGAGACCTACATCAGGCCTTCATCCTGAG...AAGGGTTTTGCAAACTGAAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGGCGCTTTGAAACCTTaGATGTATTCTGCAAATACT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAGALKP*MYSANT
Trigger: AGTATTTGCAGAATACATTCAAGGTTTCAAAGCGCC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCCCTGGCTTTCAGACTaGTGCCTCATTTGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPPWLSD*CLICLE
Trigger: TTCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCATCAGAGAAGAGGCTaGTTCCAGATTCCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPHQRRG*FQIPGK
Trigger: CTTACCTGGAATCTGGAATCAGCCTCTTCTCTGATG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCATCAGAGAAGAGGCTaGTTCCAGATTCCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKHQRRG*FQIPGK
Trigger: CTTACCTGGAATCTGGAATCAGCCTCTTCTCTGATG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAGATTTCTAGCCCCCTaGAGATCTTTCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDRFLAP*RSFCPG
Trigger: CCCAGGACAGAAAGATCTTCAGGGGGCTAGAAATCT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATACCATCCATTCCAGTTaGTCTGTGGGCATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDTIHSS*SVGMLV
Trigger: CACCAACATGCCCACAGATCAACTGGAATGGATGGT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp CTAATGTTATTACGGCTAATTGTGCTCACTGTACTTGGAATGTTCTCATTTCCCACCATCCATTCCAGTTaGTCTGTGGGCATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LMLLRLIVLTVLGMFSFPTIHSS*SVGMLV
Trigger: CACCAACATGCCCACAGATCAACTGGAATGGATGGT...GGGAAATGAGAACATTCCAAGTACAGTGAGCACAATTAGCCGTAATAACATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGATGCTGCTTCACCCTaGTACTTTTCTGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDDAASP*YFSGCL
Trigger: GAGGCATCCAGAAAAGTATCAGGGTGAAGCAGCATC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468300.5
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTCAGCATGCAAAATTTaGAAAATATGTGGTCACACT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSSACKI*KICGHT
Trigger: AGTGTGACCACATATTTTGCAAATTTTGCATGCTGA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAAAATTATAGCTGTTTaGATACTCCAAACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSKIIAV*ILQTCV
Trigger: GACACAGGTTTGGAGTATGCAAACAGCTATAATTTT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCTGAGACTGGTTTCCTaGAAGGAAGGATTTTCGGGT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKLRLVS*KEGFSG
Trigger: ACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCTGAGACTGGTTTCCTaGAAGGAAGGATTTTCGGGT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPLRLVS*KEGFSG
Trigger: ACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR GCA 90 bp ATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTAAGCCAGGCTGTTTaGTTTTATTACAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: IRCFVLRVLTVPRLESWTLSQAV*FYYRIQ
Trigger: CTGAATTCTGTAATAAAAGCAAACAGCCTGGCTTAG...TGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTTGAACTGCCAAATCTaGTTTCTTGATAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLNCQI*FLDKIL
Trigger: GAGGATTTTATCAAGAAAGCAGATTTGGCAGTTCAA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AGATCCCAATTCAATGTAGACAGACGTCTTTTGAGGTTGTATCCGCTGCTTTGTCTTCTTGGCTCCAGTTaGAGGTTCTTTACCTTCCAT +
Preference number: 4 (lower is better)
Translates to: RSQFNVDRRLLRLYPLLCLLGSS*RFFTFH
Trigger: ATGGAAGGTAAAGAACCTGCAACTGGAGCCAAGAAG...ACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAATTGGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp CTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGAACCACAGGAAAGCCTaGAGTGATATTAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: LSCTLLSGVQIIITGLMMNHRKA*SDINCL
Trigger: CAGACAGTTAATATCACTGCAGGCTTTCCTGTGGTT...CATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTAGTCTTCCAATTCACTaGACTGTGAAGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCASLPIH*TVKKTS
Trigger: GCTTGTTTTCTTCACAGTGCAGTGAATTGGAAGACT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TCTTCAGAAGGATCAGATTCAGGGTCATCAGAGAAGAGGCTGATTCCAGATTCCAGTCTTCCAATTCACTaGACTGTGAAGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: SSEGSDSGSSEKRLIPDSSLPIH*TVKKTS
Trigger: GCTTGTTTTCTTCACAGTGCAGTGAATTGGAAGACT...GGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp AGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCTGGGTGTTTGTATTTaGAGTCAAGTCTTCCAATTC +
Preference number: 4 (lower is better)
Translates to: RKDFRVHSVEVFWHGFCSLGVCI*SQVFQF
Trigger: GAATTGGAAGACTTGACTGCAAATACAAACACCCAG...GCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCTGGGTGTTTGTATTTaGAGTCAAGTCTTCCAATTC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCALGVCI*SQVFQF
Trigger: GAATTGGAAGACTTGACTGCAAATACAAACACCCAG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGAAGGCTGGCTCCCATaGTGTTCTAACACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDEGWLP*CSNTAS
Trigger: AGAAGCTGTGTTAGAACAGCATGGGAGCCAGCCTTC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TGCCACATGGCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGACTGGTAGAACTATCTaGAGACACCTCAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: CHMAPHASLKQNYPDTFLTGRTI*RHLKLV
Trigger: GACAAGTTTGAGGTGTCTGCAGATAGTTCTACCAGT...CAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCTCCCAGAGCAACTGTaGATGTACCACCTATCATCT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPLPEQL*MYHLSS
Trigger: AGATGATAGGTGGTACATGCACAGTTGCTCTGGGAG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCTCCCAGAGCAACTGTaGATGTACCACCTATCATCT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKLPEQL*MYHLSS
Trigger: AGATGATAGGTGGTACATGCACAGTTGCTCTGGGAG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCTCACACCCAGATGCTaGTTCACCCTGATACTTTTC +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPLTPRC*FTLILF
Trigger: GAAAAGTATCAGGGTGAAGCAGCATCTGGGTGTGAG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468300.5
CDS-3UTR GCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAATCTTTTTCTGATGTaGTTTGTTCTGGATTTCGCA +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSNLFLM*FVLDFA
Trigger: TGCGAAATCCAGAACAAAGCACATCAGAAAAAGATT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TTCTGTGCTGGGAGTCCGCCTATCATTACATGTTTCCTTACTTCCAGCCCATCTTGCTTGAACCCAGATTaGAAGGTAAAAGTGAACTAT +
Preference number: 4 (lower is better)
Translates to: FCAGSPPIITCFLTSSPSCLNPD*KVKVNY
Trigger: ATAGTTCACTTTTACCTTGCAATCTGGGTTCAAGCA...AGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642945.1
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCCAAGGTTAGAGAGTTaGACACTGAGACTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPPRLES*TLRLVS
Trigger: GGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCCCAAGGTTAGAGAGTTaGACACTGAGACTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSPRLES*TLRLVS
Trigger: GGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGG...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp AGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCTGCACGCTTCTCAGTaGTGTTCAAATCATTATTAC +
Preference number: 4 (lower is better)
Translates to: RKDFRVHSVEVFWHGFCSLHASQ*CSNHYY
Trigger: GTAATAATGATTTGAACACCACTGAGAAGCGTGCAG...GCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATACCCTGATACTTTTCTaGATGCCTCTCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDTLILF*MPLSCT
Trigger: CGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp AGATCCCAATTCAATGTAGACAGACGTCTTTTGAGGTTGTATCCGCTGCTTTGTCATGCTGTAATGAGCTaGCATGAGTATTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RSQFNVDRRLLRLYPLLCHAVMS*HEYLCH
Trigger: GTGGCACAAATACTCATGCCAGCTCATTACAGCATG...ACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAATTGGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTATACATCAGCTACTTTaGCATTTGATTCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAIHQLL*HLIQTP
Trigger: GGGAGTCTGAATCAAATGCCAAAGTAGCTGATGTAT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp ATTCAGACTCCCCATCATGTGAGTCATCAGAACCTAACAGTTCATCACTTCTGGCCTCATGAGGATCACTaGCCAGTAAGTCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: IQTPHHVSHQNLTVHHFWPHEDH*PVSLFS
Trigger: AGAAAATAGACTTACTGGCCAGTGATCCTCATGAGG...CCAGAAGTGATGAACTGTTAGGTTCTGATGACTCACATGATGGGGAGTCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTACTCTCTACTGATTTaGAGTGAACTCTTTCACTTT +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSYSLLI*SELFHF
Trigger: AAAGTGAAAGAGTTCACTCCAAATCAGTAGAGAGTA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTTACATGGCTTAAGTTaGGGAGGCTTGCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPLHGLS*GGLPSS
Trigger: GGAAGAAGGCAAGCCTCCCCAACTTAAGCCATGTAA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTAGATTTTCAGTTACATaGCTTAAGTTGGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCARFSVT*LKLGRL
Trigger: AAGCCTCCCCAACTTAAGCCATGTAACTGAAAATCT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp CTTTTGAGGTTGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGATTTTCAGTTACATaGCTTAAGTTGGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LLRLYPLLCPQSSHSSKVRFSVT*LKLGRL
Trigger: AAGCCTCCCCAACTTAAGCCATGTAACTGAAAATCT...AACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCTCTTGTATTATCTGTaGCTCAGTAACAAATGCTCC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCALLYYL*LSNKCS
Trigger: GGAGCATTTGTTACTGAGCCACAGATAATACAAGAG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp CAATTCAATGTAGACAGACGTCTTTTGAGGTTGTATCCGCTGCTTTGTCCTCAGCATGAATTAGTCCCTTaGGGTTTTCAAATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: QFNVDRRLLRLYPLLCPQHELVP*GFQMLH
Trigger: GTGCAGCATTTGAAAACCCCAAGGGACTAATTCATG...CTGAGGACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAAGTCCATGTTTATTTaGAGTAATGAGTCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSKSMFI*SNESSF
Trigger: GAAACTGGACTCATTACTCCAAATAAACATGGACTT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGATGGGAAAAAGTGGTaGTATACGATATGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCADGKKW*YTIWVL
Trigger: CAAAACCCATATCGTATACCACCACTTTTTCCCATC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp TTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTGAGACTGCTTGATGGGAAAAAGTaGTGGTATACGATATGGGTT +
Preference number: 4 (lower is better)
Translates to: FVLRVLTVPRLESWTLRLLDGKK*WYTIWV
Trigger: AACCCATATCGTATACCACCACTTTTTCCCATCAAG...CAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCAGGACTCTAATTTCTTaGCCCCTCTTCGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSRTLIS*PLFGNP
Trigger: AGGGTTACCGAAGAGGGGCCAAGAAATTAGAGTCCT...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAGGACTCTAATTTCTTaGCCCCTCTTCGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPRTLIS*PLFGNP
Trigger: AGGGTTACCGAAGAGGGGCCAAGAAATTAGAGTCCT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp TTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCCATACTTTCCAAATAACAAGTGTTaGAAGCAGGGAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: FRVHSVEVFWHGFCSPYFPNNKC*KQGSSS
Trigger: TGAAGAGCTTCCCTGCTTCCAACACTTGTTATTTGG...AAAGTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTCAGGTTATGTTGCATaGTATCCCTCTGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPSGYVA*YPSAEW
Trigger: CCACTCAGCAGAGGGATACCATGCAACATAACCTGA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp ATGGCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGGATGCCTCAGCCATTTCCTGCTaGAGCTTTATCAGGTTATGT +
Preference number: 4 (lower is better)
Translates to: MAPHASLKQNYPDTFLDASAISC*SFIRLC
Trigger: ACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGA...GGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp CTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGGAGCTCCTCTTGAGATaGGTAGTTTCTATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSCTLLSGVQIIITGLMMELLLR*VVSILK
Trigger: CTTCAGAATAGAAACTACCCATCTCAAGAGGAGCTC...CATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp CAAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATTCCGTCAAATCGTGTaGCCCAGACTCTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QNYSCLHTPNLCQAEKHKFRQIV*PRLFQL
Trigger: CAGCTGGAAGAGTCTGGGCCACACGATTTGACGGAA...TTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGAGCATAAATTCTTCTaGGGTCAGGCCAGACACCAC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDEHKFF*GQARHH
Trigger: GTGGTGTCTGGCCTGACCCCAGAAGAATTTATGCTC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTTAGTTAAAGTGATGTaGTGTTTTCTGGCAAACTTG +
Preference number: 4 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLVKVM*CFLANL
Trigger: CAAGTTTGCCAGAAAACACCACATCACTTTAACTAA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCGCTTTGGACCTTGGTaGTTTCTTCCATTGACCACA +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKRFGPW*FLPLTT
Trigger: TGTGGTCAATGGAAGAAACCACCAAGGTCCAAAGCG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCGCTTTGGACCTTGGTaGTTTCTTCCATTGACCACA +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPRFGPW*FLPLTT
Trigger: TGTGGTCAATGGAAGAAACCACCAAGGTCCAAAGCG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTTCTCTTGCTCGCTTTaGACCTTGGTGGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPFSCSL*TLVVSS
Trigger: GGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTTCTCTTGCTCGCTTTaGACCTTGGTGGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKFSCSL*TLVVSS
Trigger: GGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp TTCATTCTGTCTTTAGTGAGTAATAAACTGCTGTTCTCATGCTGTAATGAGCTGCTGCACAACCACAATTaGGTGGACACCTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: FILSLVSNKLLFSCCNELLHNHN*VDTCAK
Trigger: CTTGGCACAGGTGTCCACCCAATTGTGGTTGTGCAG...CAGCTCATTACAGCATGAGAACAGCAGTTTATTACTCACTAAAGACAGAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGATCTGCCCAATTGCATaGAAGCCATTGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKICPIA*KPLSSV
Trigger: GACAGAGGACAATGGCTTCCATGCAATTGGGCAGAT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCATCTGCCCAATTGCATaGAAGCCATTGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPICPIA*KPLSSV
Trigger: GACAGAGGACAATGGCTTCCATGCAATTGGGCAGAT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTATTTATGAAGCTGTATaGTTTCAGCAACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAIYEAV*FQQQGA
Trigger: TGCTCCCTGTTGCTGAAACCATACAGCTTCATAAAT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
3UTR CAA 72 bp TCAGCTCTGGGAAAGTATCGCTGTCATGTCTTTTACTaGTCTGTTCATTTGGCTTGTTACTCTTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SALGKYRCHVFY*SVHLACYSSWL
Trigger: GAGCCAAGAAGAGTAACAAGCCAAATGAACAGACAAGTAAAAGACATGACAGCGATACTTTCCCAGAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CAA 72 bp TTACATAAAGGACACTGTGAAGGCCCTTTCTTCTGGTaGAGAAGTTTCAGCATGCAAAATAGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LHKGHCEGPFFW*RSFSMQNSPSY
Trigger: GTAGCTGGGACTATTTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTCACAGTGTCCTTTATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492859.5
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCGCCCTTTCTTCTGGTTaGGAAGTTTCAGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPALSSG*EVSACK
Trigger: TTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGC...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCGCCCTTTCTTCTGGTTaGGAAGTTTCAGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSALSSG*EVSACK
Trigger: TTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGC...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGCCCTTTCTTCTGGTTaGGAAGTTTCAGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKALSSG*EVSACK
Trigger: TTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp GCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCTCTTCAACAAGTTaGCTAAATCTCGTACTTTCT +
Preference number: 4 (lower is better)
Translates to: ARKDFRVHSVEVFWHGFCSSSTS*LNLVLS
Trigger: AGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCT...ACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTAGCTCTTCAACAAGTTaGCTAAATCTCGTACTTTCT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCASSSTS*LNLVLS
Trigger: AGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTAAACCTGTGTCAAGCTaGAAAGCACAAATGATTTTC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAKPVSS*KAQMIF
Trigger: GAAAATCATTTGTGCTTTTCAGCTTGACACAGGTTT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp CTTTTGAGGTTGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAAACCTGTGTCAAGCTaGAAAGCACAAATGATTTTC +
Preference number: 4 (lower is better)
Translates to: LLRLYPLLCPQSSHSSKVKPVSS*KAQMIF
Trigger: GAAAATCATTTGTGCTTTTCAGCTTGACACAGGTTT...AACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTCATCCCTGGTTCCTTaGGGGGTGATTTGTAACAAT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPSSLVP*GVICNN
Trigger: ATTGTTACAAATCACCCCTCAAGGAACCAGGGATGA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGAAACAGAACTACCCTaGTACTTTTCTGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKETELP*YFSGCL
Trigger: GAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTGTAATGAGCTGGCATaGGTATTTGTGCCACATGGC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDCNELA*VFVPHG
Trigger: GCCATGTGGCACAAATACTCATGCCAGCTCATTACA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGATCTCTAGGATTCTCTaGGCATGGCAGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKISRIL*AWQFLL
Trigger: AAGCAGAAACTGCCATGCTCAGAGAATCCTAGAGAT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCAGCTACTTTGGCATTTaGTTCAGACTCCCCATCATG +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSSYFGI*FRLPIM
Trigger: CATGATGGGGAGTCTGAATCAAATGCCAAAGTAGCT...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGAGCTACTTTGGCATTTaGTTCAGACTCCCCATCATG +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKSYFGI*FRLPIM
Trigger: CATGATGGGGAGTCTGAATCAAATGCCAAAGTAGCT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCATATTAAAGCCTCATaGGGATCACTGGCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKHIKAS*GSLASK
Trigger: CTTACTGGCCAGTGATCCTCATGAGGCTTTAATATG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp CTTTTGAGGTTGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTGCTTTAATTTATTTGTaGGGGGACGCTCTTGTATTA +
Preference number: 4 (lower is better)
Translates to: LLRLYPLLCPQSSHSSKVALIYL*GDALVL
Trigger: TAATACAAGAGCGTCCCCTCACAAATAAATTAAAGC...AACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGCTCAGGATGAAGGCCTaGTGTAGGTCTCCTTTTACG +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKLRMKA*CRSPFT
Trigger: CGTAAAAGGAGACCTACATCAGGCCTTCATCCTGAG...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCATAAAATCCTCAGGATaGAGGCCTGATGTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSIKSSG*RPDVGL
Trigger: GAGACCTACATCAGGCCTTCATCCTGAGGATTTTAT...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCATAAAATCCTCAGGATaGAGGCCTGATGTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPIKSSG*RPDVGL
Trigger: GAGACCTACATCAGGCCTTCATCCTGAGGATTTTAT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGACTAGTTCAAGCGCATaGATATGCCTGGTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKTSSSA*ICLVED
Trigger: GTCTTCTACCAGGCATATTCATGCGCTTGAACTAGT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp GCAGTTTCTGCTTATTCCATTCTTTTCTCTCACACAGGGGATCAGCATTCAGATGTTCTTTACCTTCCATaGGTTGTAGGTTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: AVSAYSILFSHTGDQHSDVLYLP*VVGFCC
Trigger: ACAGCAGAAACCTACAACTCATGGAAGGTAAAGAAC...ATCTGAATGCTGATCCCCTGTGTGAGAGAAAAGAATGGAATAAGCAGAAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp CAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGTTAGTACCAGGTACCAATaGAATACTGCTACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: QLHASQWCSNHYYWVDDVSTRYQ*NTATLY
Trigger: GTAGAGAGTAGCAGTATTTCATTGGTACCTGGTACT...AACATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGTATTCTGCAAATACTaGGCATCAAGTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAVFCKY*ASSSLS
Trigger: AGAAAGTGAACTTGATGCTCAGTATTTGCAGAATAC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCTATGCCTAGTAGACTaGGAAGGTATATTGTTTACT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCALCLVD*EGILFT
Trigger: AGTAAACAATATACCTTCTCAGTCTACTAGGCATAG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp TGGCATTTGATTCAGACTCCCCATCATGTGAGTCATCAGAACCTAACAGTTCATCAATTCACTGCACTGTaGAGAAAACAAGCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: WHLIQTPHHVSHQNLTVHQFTAL*RKQASR
Trigger: TCTGCTAGCTTGTTTTCTTCACAGTGCAGTGAATTG...ATGAACTGTTAGGTTCTGATGACTCACATGATGGGGAGTCTGAATCAAATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp CCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGCCCTGGCTTTCAGACTaGTGCCTCATTTGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: PEVSPPVIRMLKLIQSKMPWLSD*CLICLE
Trigger: TTCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGG...CATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTGGCTTTCAGACTaGTGCCTCATTTGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDPWLSD*CLICLE
Trigger: TTCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCTTTCTTCATCATCTaGAACCAATTCCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCASFFII*NQFLVT
Trigger: AGTGACAAGGAATTGGTTTCAGATGATGAAGAAAGA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCATCAGAGAAGAGGCTaGTTCCAGATTCCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDHQRRG*FQIPGK
Trigger: CTTACCTGGAATCTGGAATCAGCCTCTTCTCTGATG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCCAACAACAGCCTaGATAGAAAGAATAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPKPTTA*IERIGL
Trigger: CAGCCCTATTCTTTCTATTCAGGCTGTTGTTGGCTT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTTCCACTCCAACATTTaGGAACTGCCCAAGGACTAT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKFHSNI*ELPKDY
Trigger: ATAGTCCTTGGGCAGTTCTCAAATGTTGGAGTGGAA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTTCTTTCTGTTCCAATaGACCAGAGCAGAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKFFLFQ*TRAEGE
Trigger: TTCACCCTCTGCTCTGGTTCATTGGAACAGAAAGAA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468300.5
CDS-3UTR TCA 90 bp ACCCAGATGCTGCTTCACCTAAGTTTGAATCCATGCTTTGCTCTTCTTGATTATTTCTTTCTGTTCCAATaGACCATCTGTCAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: TQMLLHLSLNPCFALLDYFFLFQ*TICQLR
Trigger: CCGAAGCTGACAGATGGTTCATTGGAACAGAAAGAA...ATAATCAAGAAGAGCAAAGCATGGATTCAAACTTAGGTGAAGCAGCATCTGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp TTCTGTGCTGGGAGTCCGCCTATCATTACATGTTTCCTTACTTCCAGCCCATCTAAAATTATAGCTGTTTaGATACTCCAAACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FCAGSPPIITCFLTSSPSKIIAV*ILQTCV
Trigger: GACACAGGTTTGGAGTATGCAAACAGCTATAATTTT...AGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp CCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGCTGAGACTGGTTTCCTaGAAGGAAGGATTTTCGGGT +
Preference number: 4 (lower is better)
Translates to: PEVSPPVIRMLKLIQSKMLRLVS*KEGFSG
Trigger: ACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAG...CATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCACACTGCAATAAGTTaGCTTATTAACGGTATCTTC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAHTAIS*LINGIF
Trigger: GAAGATACCGTTAATAAGGCAACTTATTGCAGTGTG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR GCA 90 bp AGGTTGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGAACTGCCAAATCTaGTTTCTTGATAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: RLYPLLCPQSSHSSKVRELNCQI*FLDKIL
Trigger: GAGGATTTTATCAAGAAAGCAGATTTGGCAGTTCAA...CTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCTTCTTGGCTCCAGTTaGAGGTTCTTTACCTTCCAT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPLLGSS*RFFTFH
Trigger: ATGGAAGGTAAAGAACCTGCAACTGGAGCCAAGAAG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTACAGATCTTTCAGTTTaGAAAACCCTTTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCATDLSV*KTLSPL
Trigger: AAGTGGAGAAAGGGTTTTGCAAACTGAAAGATCTGT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp GATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCCATACACAGATCTTTCAGTTTaGAAAACCCTTTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: DFRVHSVEVFWHGFCSPYTDLSV*KTLSPL
Trigger: AAGTGGAGAAAGGGTTTTGCAAACTGAAAGATCTGT...GTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCTTGGGGTTTTCAAATaGTGCACACTGACTCACACA +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKLGVFK*CTLTHT
Trigger: TGTGTGAGTCAGTGTGCAGCATTTGAAAACCCCAAG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp CAATTCAATGTAGACAGACGTCTTTTGAGGTTGTATCCGCTGCTTTGTCCTCAGCTGCTTTTTCTGATGTaGTTTGTTCTGGATTTCGCA +
Preference number: 4 (lower is better)
Translates to: QFNVDRRLLRLYPLLCPQLLFLM*FVLDFA
Trigger: TGCGAAATCCAGAACAAAGCACATCAGAAAAAGCAG...CTGAGGACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCTCCCAGAGCAACTGTaGATGTACCACCTATCATCT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDLPEQL*MYHLSS
Trigger: AGATGATAGGTGGTACATGCACAGTTGCTCTGGGAG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp ACCCAGATGCTGCTTCACCTAAGTTTGAATCCATGCTTTGCTCTTCTTGATTATTTGAAGATGGTATGTTaGCAACACGAGCTGACTCTG +
Preference number: 4 (lower is better)
Translates to: TQMLLHLSLNPCFALLDYLKMVC*QHELTL
Trigger: CAGAGTCAGCTCGTGTTGGCAACATACCATCTTCAA...ATAATCAAGAAGAGCAAAGCATGGATTCAAACTTAGGTGAAGCAGCATCTGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTTGAAGATGGTATGTTaGCAACACGAGCTGACTCTG +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKLKMVC*QHELTL
Trigger: CAGAGTCAGCTCGTGTTGGCAACATACCATCTTCAA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGCTACCAAGTTTATTTaGAGTGTTAACAGCACAACA +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAATKFI*SVNSTT
Trigger: TGTTGTGCTGTTAACACTGCAAATAAACTTGGTAGC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCTTTGGCCATGTATATaGGAATCTTTTTCTGATGTG +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCALWPCI*ESFSDV
Trigger: CACATCAGAAAAAGATTCGCATATACATGGCCAAAG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp TGGCATGAGTATTTGTGCCACATGGCTCCACATGCAAGTTTGAAACAGAACTACTCAACTCCAGACAGATaGGACACTCTAAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: WHEYLCHMAPHASLKQNYSTPDR*DTLRFS
Trigger: AGAAAATCTTAGAGTGTCCCATCTGTCTGGAGTTGA...GTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp TTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCCATACTTTTCAACTCCAGACAGATaGGACACTCTAAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: FRVHSVEVFWHGFCSPYFSTPDR*DTLRFS
Trigger: AGAAAATCTTAGAGTGTCCCATCTGTCTGGAGTTGA...AAAGTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000461221.5
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGAAGGCCCTTTCTTCTaGTTGAGAAGTTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKEGPFF*LRSFSM
Trigger: CATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCGAAGGCCCTTTCTTCTaGTTGAGAAGTTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPEGPFF*LRSFSM
Trigger: CATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTC...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp TCTGCAACTTTCAATTGGGGAACTTTCAATGCAGAGGTTGAAGATGGTATGTTGGAAGGCCCTTTCTTCTaGTTGAGAAGTTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: SATFNWGTFNAEVEDGMLEGPFF*LRSFSM
Trigger: CATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTC...CAACATACCATCTTCAACCTCTGCATTGAAAGTTCCCCAATTGAAAGTTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTCTGTAGAAGTCTTTTaGCACGGTTTCTGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPSVEVF*HGFCSP
Trigger: TGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCTCTGTAGAAGTCTTTTaGCACGGTTTCTGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSSVEVF*HGFCSP
Trigger: TGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGA...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCAAGGTTAGAGAGTTaGACACTGAGACTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDPRLES*TLRLVS
Trigger: GGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp CAATTCAATGTAGACAGACGTCTTTTGAGGTTGTATCCGCTGCTTTGTCCTCAGCTGCACGCTTCTCAGTaGTGTTCAAATCATTATTAC +
Preference number: 4 (lower is better)
Translates to: QFNVDRRLLRLYPLLCPQLHASQ*CSNHYY
Trigger: GTAATAATGATTTGAACACCACTGAGAAGCGTGCAG...CTGAGGACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGACCCTGATACTTTTCTaGATGCCTCTCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKTLILF*MPLSCT
Trigger: CGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGT...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp TTCATTCTGTCTTTAGTGAGTAATAAACTGCTGTTCTCATGCTGTAATGAGCTGACCCTGATACTTTTCTaGATGCCTCTCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: FILSLVSNKLLFSCCNELTLILF*MPLSCT
Trigger: CGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGT...CAGCTCATTACAGCATGAGAACAGCAGTTTATTACTCACTAAAGACAGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp AGTTTCTGCTTATTCCATTCTTTTCTCTCACACAGGGGATCAGCATTCAGATCTCATGCTGTAATGAGCTaGCATGAGTATTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SFCLFHSFLSHRGSAFRSHAVMS*HEYLCH
Trigger: GTGGCACAAATACTCATGCCAGCTCATTACAGCATG...AGATCTGAATGCTGATCCCCTGTGTGAGAGAAAAGAATGGAATAAGCAGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR CCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTGCCCATCTGTTATGTTaGCTCCTTGCTAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLAHLLC*LLAKPG
Trigger: GCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGC...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CTTTTCTGGATGCCTCTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTATACATCAGCTACTTTaGCATTTGATTCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: LFWMPLSCTLLSGVQIIIIHQLL*HLIQTP
Trigger: GGGAGTCTGAATCAAATGCCAAAGTAGCTGATGTAT...AATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR CCA 90 bp TTCTGTGCTGGGAGTCCGCCTATCATTACATGTTTCCTTACTTCCAGCCCATCTTACTCTCTACTGATTTaGAGTGAACTCTTTCACTTT +
Preference number: 4 (lower is better)
Translates to: FCAGSPPIITCFLTSSPSYSLLI*SELFHF
Trigger: AAAGTGAAAGAGTTCACTCCAAATCAGTAGAGAGTA...AGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR CCA 90 bp CCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGTTACATGGCTTAAGTTaGGGAGGCTTGCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PEVSPPVIRMLKLIQSKMLHGLS*GGLPSS
Trigger: GGAAGAAGGCAAGCCTCCCCAACTTAAGCCATGTAA...CATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGCTTGTTACTCTTCTTaGCTCCAGTTGCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKACYSS*LQLQVL
Trigger: AAGAACCTGCAACTGGAGCCAAGAAGAGTAACAAGC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTTTGGCATTATCAACTaGCTTATCTTTCTGACCAAC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAFGIIN*LIFLTN
Trigger: GTTGGTCAGAAAGATAAGCCAGTTGATAATGCCAAA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAGGACTCTAATTTCTTaGCCCCTCTTCGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDRTLIS*PLFGNP
Trigger: AGGGTTACCGAAGAGGGGCCAAGAAATTAGAGTCCT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTCAGGTTATGTTGCATaGTATCCCTCTGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDSGYVA*YPSAEW
Trigger: CCACTCAGCAGAGGGATACCATGCAACATAACCTGA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp GGTACCAATGAAATACTGCTACTCTCTACAGATCTTTCAGTTTGCAAAACCCTTTCAGGTTATGTTGCATaGTATCCCTCTGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: GTNEILLLSTDLSVCKTLSGYVA*YPSAEW
Trigger: CCACTCAGCAGAGGGATACCATGCAACATAACCTGA...AAGGGTTTTGCAAACTGAAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAGCAGAAAGGCCTTCTaGATTCTGGCTTATAGGGTA +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPSRKAF*ILAYRV
Trigger: TACCCTATAAGCCAGAATCCAGAAGGCCTTTCTGCT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATATCTGCCCAATTGCATaGAAGCCATTGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDICPIA*KPLSSV
Trigger: GACAGAGGACAATGGCTTCCATGCAATTGGGCAGAT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
3UTR CAA 72 bp AGATTAGTTAAAGTGATGTGGTGTTTTCTGGCAAACTaGTACACGAGCATAAATTCTTCTGGGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RLVKVMWCFLAN*YTSINSSGVRP
Trigger: TGGCCTGACCCCAGAAGAATTTATGCTCGTGTACAAGTTTGCCAGAAAACACCACATCACTTTAACTAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTTCTTTCTGTTCCAATaGACTTTACCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPFFLFQ*TLPRAE
Trigger: CTCTGCTCTGGGTAAAGTTCATTGGAACAGAAAGAA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTTGGAGACAGGTTCCTTaGTCAACTCCAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLWRQVP*STPDRW
Trigger: CCATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCA...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp GTTCAAATCATTATTACTGGGTTGATGATGTTCAGTATTTGTTACATCCGTCTCTGGAGACAGGTTCCTTaGTCAACTCCAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: VQIIITGLMMFSICYIRLWRQVP*STPDRW
Trigger: CCATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCA...GAGACGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTCATCCCTGGTTCCTTaGGGGGTGATTTGTAACAAT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDSSLVP*GVICNN
Trigger: ATTGTTACAAATCACCCCTCAAGGAACCAGGGATGA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCCTCCACATGCAAGTTTaGAACAGAACTACCCTGATA +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSLHMQV*NRTTLI
Trigger: TATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAG...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGTGTAATGAGCTGGCATaGGTATTTGTGCCACATGGC +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKCNELA*VFVPHG
Trigger: GCCATGTGGCACAAATACTCATGCCAGCTCATTACA...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATATCTCTAGGATTCTCTaGGCATGGCAGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDISRIL*AWQFLL
Trigger: AAGCAGAAACTGCCATGCTCAGAGAATCCTAGAGAT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATATAAAATCCTCAGGATaGAGGCCTGATGTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDIKSSG*RPDVGL
Trigger: GAGACCTACATCAGGCCTTCATCCTGAGGATTTTAT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGTAATATTCATCACTTaGCCATTCTGCTCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKVIFIT*PFCSVW
Trigger: CCAAACGGAGCAGAATGGTCAAGTGATGAATATTAC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATACTAGTTCAAGCGCATaGATATGCCTGGTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDTSSSA*ICLVED
Trigger: GTCTTCTACCAGGCATATTCATGCGCTTGAACTAGT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGTTCTTTACCTTCCATaGGTTGTAGGTTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKVLYLP*VVGFCC
Trigger: ACAGCAGAAACCTACAACTCATGGAAGGTAAAGAAC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTCTTTGGAACAACCATaGATTAGTCCCTTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKSLEQP*ISPLGF
Trigger: AAACCCCAAGGGACTAATTCATGGTTGTTCCAAAGA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCCAGTTTCGTTGCCTCTaGACTGAGATGATAGACAAA +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSQFRCL*TEMIDK
Trigger: TTTGTCTATCATCTCAGTTCAGAGGCAACGAAACTG...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp CACTTTTACATATTAAAGCCTCATGAGGATCACTGGCCAGTAAGTCTATTTTCTCATCAGAGAAGAGGCTaGTTCCAGATTCCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: HFYILKPHEDHWPVSLFSHQRRG*FQIPGK
Trigger: CTTACCTGGAATCTGGAATCAGCCTCTTCTCTGATG...AGAAAATAGACTTACTGGCCAGTGATCCTCATGAGGCTTTAATATGTAAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTTTCAATGCAGAGGTTaGAGATGGTATGTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPFQCRG*RWYVAN
Trigger: GTTGGCAACATACCATCTTCAACCTCTGCATTGAAA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTTCCACTCCAACATTTaGGAACTGCCCAAGGACTAT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDFHSNI*ELPKDY
Trigger: ATAGTCCTTGGGCAGTTCTCAAATGTTGGAGTGGAA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp CTTTTGAGGTTGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAAAATTATAGCTGTTTaGATACTCCAAACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LLRLYPLLCPQSSHSSKVKIIAV*ILQTCV
Trigger: GACACAGGTTTGGAGTATGCAAACAGCTATAATTTT...AACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp ATGGCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGGATGCCCACACTGCAATAAGTTaGCTTATTAACGGTATCTTC +
Preference number: 4 (lower is better)
Translates to: MAPHASLKQNYPDTFLDAHTAIS*LINGIF
Trigger: GAAGATACCGTTAATAAGGCAACTTATTGCAGTGTG...GGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCCACATGGCTCCACATaGAAGTTTGAAACAGAACTA +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKPHGST*KFETEL
Trigger: TAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGTGGCATGAGTATTTGTaGCACATGGCTCCACATGCA +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKWHEYL*HMAPHA
Trigger: TGCATGTGGAGCCATGTGGCACAAATACTCATGCCA...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp TTCATTCTGTCTTTAGTGAGTAATAAACTGCTGTTCTCATGCTGTAATGAGCTGTGGCATGAGTATTTGTaGCACATGGCTCCACATGCA +
Preference number: 4 (lower is better)
Translates to: FILSLVSNKLLFSCCNELWHEYL*HMAPHA
Trigger: TGCATGTGGAGCCATGTGGCACAAATACTCATGCCA...CAGCTCATTACAGCATGAGAACAGCAGTTTATTACTCACTAAAGACAGAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp TTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCCATACTTTCTAAGCCAGGCTGTTTaGTTTTATTACAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: FRVHSVEVFWHGFCSPYFLSQAV*FYYRIQ
Trigger: CTGAATTCTGTAATAAAAGCAAACAGCCTGGCTTAG...AAAGTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTTGAACTGCCAAATCTaGTTTCTTGATAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCALNCQI*FLDKIL
Trigger: GAGGATTTTATCAAGAAAGCAGATTTGGCAGTTCAA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp CCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGCTTCTTGGCTCCAGTTaGAGGTTCTTTACCTTCCAT +
Preference number: 4 (lower is better)
Translates to: PEVSPPVIRMLKLIQSKMLLGSS*RFFTFH
Trigger: ATGGAAGGTAAAGAACCTGCAACTGGAGCCAAGAAG...CATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp AGTTTCTGCTTATTCCATTCTTTTCTCTCACACAGGGGATCAGCATTCAGATCTAGAACAAACCTGAGATaGATGACTACTTCCCATAGG +
Preference number: 4 (lower is better)
Translates to: SFCLFHSFLSHRGSAFRSRTNLR*MTTSHR
Trigger: CCTATGGGAAGTAGTCATGCATCTCAGGTTTGTTCT...AGATCTGAATGCTGATCCCCTGTGTGAGAGAAAAGAATGGAATAAGCAGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCGTGATGTTCCTGAGATaGCTTTGCCAATATTACCTG +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSVMFLR*LCQYYL
Trigger: CAGGTAATATTGGCAAAGGCATCTCAGGAACATCAC...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGTGATGTTCCTGAGATaGCTTTGCCAATATTACCTG +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKVMFLR*LCQYYL
Trigger: CAGGTAATATTGGCAAAGGCATCTCAGGAACATCAC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TCTGCAACTTTCAATTGGGGAACTTTCAATGCAGAGGTTGAAGATGGTATGTTGAGTTCAGCCATTTCCTaGTGGAGCTTTATCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SATFNWGTFNAEVEDGMLSSAIS*WSFIRL
Trigger: TAACCTGATAAAGCTCCAGCAGGAAATGGCTGAACT...CAACATACCATCTTCAACCTCTGCATTGAAAGTTCCCCAATTGAAAGTTGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGAGTTCAGCCATTTCCTaGTGGAGCTTTATCAGGTTA +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKSSAIS*WSFIRL
Trigger: TAACCTGATAAAGCTCCAGCAGGAAATGGCTGAACT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGACTGGTAGAACTATCTaGAGACACCTCAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKTGRTI*RHLKLV
Trigger: GACAAGTTTGAGGTGTCTGCAGATAGTTCTACCAGT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTTGAAGATGGTATGTTaGCAACACGAGCTGACTCTG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDLKMVC*QHELTL
Trigger: CAGAGTCAGCTCGTGTTGGCAACATACCATCTTCAA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATACTCTGGGCAGATTCTaGAACTTTCAATTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDTLGRF*NFQLGN
Trigger: GTTCCCCAATTGAAAGTTGCAGAATCTGCCCAGAGT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCCAACATTTGAGAACTaGCCAAGGACTATTCTGACT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKPTFEN*PRTILT
Trigger: AGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGAAGGCCCTTTCTTCTaGTTGAGAAGTTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDEGPFF*LRSFSM
Trigger: CATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCATGCTGTAATGAGCTaGCATGAGTATTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDHAVMS*HEYLCH
Trigger: GTGGCACAAATACTCATGCCAGCTCATTACAGCATG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCCTCATGAGGATCACTaGCCAGTAAGTCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPPHEDH*PVSLFS
Trigger: AGAAAATAGACTTACTGGCCAGTGATCCTCATGAGG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTCTGCTGTGCCTGACTaGCATTTGGTTGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPSAVPD*HLVVLF
Trigger: AAAAAGTACAACCAAATGCCAGTCAGGCACAGCAGA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCATGAATTAGTCCCTTaGGGTTTTCAAATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKHELVP*GFQMLH
Trigger: GTGCAGCATTTGAAAACCCCAAGGGACTAATTCATG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCCTTGTTTCCCGACTGTaGTTAACTTCATGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSLVSRL*LTSCPN
Trigger: ATTGGGACATGAAGTTAACCACAGTCGGGAAACAAG...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCAACGGAGCAAATGACTaGCGCTTTGAAACCTTGAAT +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSNGAND*RFETLN
Trigger: ATTCAAGGTTTCAAAGCGCCAGTCATTTGCTCCGTT...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp AGTTTCTGCTTATTCCATTCTTTTCTCTCACACAGGGGATCAGCATTCAGATCTAACGGAGCAAATGACTaGCGCTTTGAAACCTTGAAT +
Preference number: 4 (lower is better)
Translates to: SFCLFHSFLSHRGSAFRSNGAND*RFETLN
Trigger: ATTCAAGGTTTCAAAGCGCCAGTCATTTGCTCCGTT...AGATCTGAATGCTGATCCCCTGTGTGAGAGAAAAGAATGGAATAAGCAGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp TGCCTGGTAGAAGACTTCCTCCTCAGCCTATTCTTTTTAGGTGCTTTTGAATTGGATGGGAAAAAGTGGTaGTATACGATATGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: CLVEDFLLSLFFLGAFELDGKKW*YTIWVL
Trigger: CAAAACCCATATCGTATACCACCACTTTTTCCCATC...CAATTCAAAAGCACCTAAAAAGAATAGGCTGAGGAGGAAGTCTTCTACCAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCCAAATAACAAGTGTTaGAAGCAGGGAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPPNNKC*KQGSSS
Trigger: TGAAGAGCTTCCCTGCTTCCAACACTTGTTATTTGG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTTTGCCAATATTACCTaGTTACTGCAGTCATTTAAG +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAFANIT*LLQSFK
Trigger: CTTAAATGACTGCAGTAACCAGGTAATATTGGCAAA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTATCCCTCTGCTGAGTaGTTAAAATGTCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPYPSAE*LKCHSE
Trigger: CTCAGAGTGACATTTTAACCACTCAGCAGAGGGATA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTCAGCCATTTCCTGCTaGAGCTTTATCAGGTTATGT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKSAISC*SFIRLC
Trigger: ACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTCAGCCATTTCCTGCTaGAGCTTTATCAGGTTATGT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPSAISC*SFIRLC
Trigger: ACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGAGGCCTTCTGGATTCTaGCTTATAGGGTATTCACTA +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKRPSGF*LIGYSL
Trigger: TAGTGAATACCCTATAAGCCAGAATCCAGAAGGCCT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAGGCCTTCTGGATTCTaGCTTATAGGGTATTCACTA +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPRPSGF*LIGYSL
Trigger: TAGTGAATACCCTATAAGCCAGAATCCAGAAGGCCT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAGCAGAAAGGCCTTCTaGATTCTGGCTTATAGGGTA +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDSRKAF*ILAYRV
Trigger: TACCCTATAAGCCAGAATCCAGAAGGCCTTTCTGCT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGAGCTCCTCTTGAGATaGGTAGTTTCTATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKELLLR*VVSILK
Trigger: CTTCAGAATAGAAACTACCCATCTCAAGAGGAGCTC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCGAGCTCCTCTTGAGATaGGTAGTTTCTATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPELLLR*VVSILK
Trigger: CTTCAGAATAGAAACTACCCATCTCAAGAGGAGCTC...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTTAGTTAAAGTGATGTaGTGTTTTCTGGCAAACTTG +
Preference number: 4 (lower is better)
Translates to: RSKLRETSYSLEAKPLCALVKVM*CFLANL
Trigger: CAAGTTTGCCAGAAAACACCACATCACTTTAACTAA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp ATGAGCTGGCATGAGTATTTGTGCCACATGGCTCCACATGCAAGTTTGAAACAGTTAGTTAAAGTGATGTaGTGTTTTCTGGCAAACTTG +
Preference number: 4 (lower is better)
Translates to: MSWHEYLCHMAPHASLKQLVKVM*CFLANL
Trigger: CAAGTTTGCCAGAAAACACCACATCACTTTAACTAA...CTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCAGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGATCTTTCTGTCCTaGGATTCTCTTGCTCGCTTT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPKIFLS*DSLARF
Trigger: AAAGCGAGCAAGAGAATCCCAGGACAGAAAGATCTT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCAACAGCTTCCTTCCTaGTGGGATCTGTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPQQLPS*WDLSFY
Trigger: ATAAAATGACAGATCCCACCAGGAAGGAAGCTGTTG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTTCTTTCTGTTCCAATaGACTTTACCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDFFLFQ*TLPRAE
Trigger: CTCTGCTCTGGGTAAAGTTCATTGGAACAGAAAGAA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp ATAAACTGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTGCCACATGAGCTCTTCAACAAGTTaGCTAAATCTCGTACTTTCT +
Preference number: 4 (lower is better)
Translates to: INCCSHAVMSWHEYLCHMSSSTS*LNLVLS
Trigger: AGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCT...CATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp TGCCTGGTAGAAGACTTCCTCCTCAGCCTATTCTTTTTAGGTGCTTTTGAATTGAAACCTGTGTCAAGCTaGAAAGCACAAATGATTTTC +
Preference number: 4 (lower is better)
Translates to: CLVEDFLLSLFFLGAFELKPVSS*KAQMIF
Trigger: GAAAATCATTTGTGCTTTTCAGCTTGACACAGGTTT...CAATTCAAAAGCACCTAAAAAGAATAGGCTGAGGAGGAAGTCTTCTACCAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTGGTTCCTTGAGGGGTaGTTTGTAACAATTCTTGAT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPWFLEG*FVTILD
Trigger: ATCAAGAATTGTTACAAATCACCCCTCAAGGAACCA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGTCATCCCTGGTTCCTTaGGGGGTGATTTGTAACAAT +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKSSLVP*GVICNN
Trigger: ATTGTTACAAATCACCCCTCAAGGAACCAGGGATGA...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp TCTGAAGAACCAGAATATTCATCTACCTCATTTAGAACGTCCAATACATCAGCTTCATCCCTGGTTCCTTaGGGGGTGATTTGTAACAAT +
Preference number: 4 (lower is better)
Translates to: SEEPEYSSTSFRTSNTSASSLVP*GVICNN
Trigger: ATTGTTACAAATCACCCCTCAAGGAACCAGGGATGA...AGCTGATGTATTGGACGTTCTAAATGAGGTAGATGAATATTCTGGTTCTTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR TCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGGAAACAGAACTACCCTaGTACTTTTCTGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKETELP*YFSGCL
Trigger: GAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTC...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCTCCACATGCAAGTTTaGAACAGAACTACCCTGATA +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDLHMQV*NRTTLI
Trigger: TATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp ATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATGATTTTCATATTAAAGCCTCATaGGGATCACTGGCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: IAVCILQTCVKLKSTNDFHIKAS*GSLASK
Trigger: CTTACTGGCCAGTGATCCTCATGAGGCTTTAATATG...AAAATCATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR TCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCATTTCAGGAGTCTTTTaGACTGCCAAATCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSISGVF*TAKSAF
Trigger: GAAAGCAGATTTGGCAGTTCAAAAGACTCCTGAAAT...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCATTTCAGGAGTCTTTTaGACTGCCAAATCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPISGVF*TAKSAF
Trigger: GAAAGCAGATTTGGCAGTTCAAAAGACTCCTGAAAT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGACTAGTTCAAGCGCATaGATATGCCTGGTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKTSSSA*ICLVED
Trigger: GTCTTCTACCAGGCATATTCATGCGCTTGAACTAGT...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp CCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGGGCTTAGATTTCTACTaGCTACTAGTTCAAGCGCAT +
Preference number: 4 (lower is better)
Translates to: PEVSPPVIRMLKLIQSKMGLDFY*LLVQAH
Trigger: ATGCGCTTGAACTAGTAGTCAGTAGAAATCTAAGCC...CATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGTTCTTTACCTTCCATaGGTTGTAGGTTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDVLYLP*VVGFCC
Trigger: ACAGCAGAAACCTACAACTCATGGAAGGTAAAGAAC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp CCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGAGTACCAGGTACCAATaGAATACTGCTACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: PEVSPPVIRMLKLIQSKMSTRYQ*NTATLY
Trigger: GTAGAGAGTAGCAGTATTTCATTGGTACCTGGTACT...CATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp CAACTTTCAATTGGGGAACTTTCAATGCAGAGGTTGAAGATGGTATGTTGCCAAGGCGCTTTGAAACCTTaGATGTATTCTGCAAATACT +
Preference number: 4 (lower is better)
Translates to: QLSIGELSMQRLKMVCCQGALKP*MYSANT
Trigger: AGTATTTGCAGAATACATTCAAGGTTTCAAAGCGCC...TTGGCAACATACCATCTTCAACCTCTGCATTGAAAGTTCCCCAATTGAAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCAATTCACTGCACTGTaGAGAAAACAAGCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDQFTAL*RKQASR
Trigger: TCTGCTAGCTTGTTTTCTTCACAGTGCAGTGAATTG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCCATACTTTAAAATTATAGCTGTTTaGATACTCCAAACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FRVHSVEVFWHGFCSPYFKIIAV*ILQTCV
Trigger: GACACAGGTTTGGAGTATGCAAACAGCTATAATTTT...AAAGTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461221.5
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp AAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATCTGAGACTGGTTTCCTaGAAGGAAGGATTTTCGGGT +
Preference number: 4 (lower is better)
Translates to: KIIAVCILQTCVKLKSTNLRLVS*KEGFSG
Trigger: ACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAG...ATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp TGGCATTTGATTCAGACTCCCCATCATGTGAGTCATCAGAACCTAACAGTTCATCACACTGCAATAAGTTaGCTTATTAACGGTATCTTC +
Preference number: 4 (lower is better)
Translates to: WHLIQTPHHVSHQNLTVHHTAIS*LINGIF
Trigger: GAAGATACCGTTAATAAGGCAACTTATTGCAGTGTG...ATGAACTGTTAGGTTCTGATGACTCACATGATGGGGAGTCTGAATCAAATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR GCA 90 bp CAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGTTCACACTGCAATAAGTTaGCTTATTAACGGTATCTTC +
Preference number: 4 (lower is better)
Translates to: QLHASQWCSNHYYWVDDVHTAIS*LINGIF
Trigger: GAAGATACCGTTAATAAGGCAACTTATTGCAGTGTG...AACATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp CTAATGTTATTACGGCTAATTGTGCTCACTGTACTTGGAATGTTCTCATTTCCCCCACATGGCTCCACATaGAAGTTTGAAACAGAACTA +
Preference number: 4 (lower is better)
Translates to: LMLLRLIVLTVLGMFSFPPHGST*KFETEL
Trigger: TAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGG...GGGAAATGAGAACATTCCAAGTACAGTGAGCACAATTAGCCGTAATAACATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp TGCCACATGGCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGGTACCAATGAAATACTaGTACTCTCTACAGATCTTT +
Preference number: 4 (lower is better)
Translates to: CHMAPHASLKQNYPDTFLVPMKY*YSLQIF
Trigger: AAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTAC...CAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGGGGTTTTCAAATGCTaGACACTGACTCACACATTT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDGVFKC*TLTHTF
Trigger: AAATGTGTGAGTCAGTGTGCAGCATTTGAAAACCCC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp ACCCAGATGCTGCTTCACCTAAGTTTGAATCCATGCTTTGCTCTTCTTGATTATTTTCTTCCATTTCTATaGTTGTTTCCCGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: TQMLLHLSLNPCFALLDYFLPFL*LFPDCG
Trigger: ACCACAGTCGGGAAACAAGCATAGAAATGGAAGAAA...ATAATCAAGAAGAGCAAAGCATGGATTCAAACTTAGGTGAAGCAGCATCTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTTTCTTCCATTTCTATaGTTGTTTCCCGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKFLPFL*LFPDCG
Trigger: ACCACAGTCGGGAAACAAGCATAGAAATGGAAGAAA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAACCACAGGAAAGCCTaGAGTGATATTAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDNHRKA*SDINCL
Trigger: CAGACAGTTAATATCACTGCAGGCTTTCCTGTGGTT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAGAACAAACCTGAGATaGATGACTACTTCCCATAGG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDRTNLR*MTTSHR
Trigger: CCTATGGGAAGTAGTCATGCATCTCAGGTTTGTTCT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCAGTCTTCCAATTCACTaGACTGTGAAGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSSLPIH*TVKKTS
Trigger: GCTTGTTTTCTTCACAGTGCAGTGAATTGGAAGACT...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGAGTCTTCCAATTCACTaGACTGTGAAGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKSLPIH*TVKKTS
Trigger: GCTTGTTTTCTTCACAGTGCAGTGAATTGGAAGACT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAGTCTTCCAATTCACTaGACTGTGAAGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPSLPIH*TVKKTS
Trigger: GCTTGTTTTCTTCACAGTGCAGTGAATTGGAAGACT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCTGGGTGTTTGTATTTaGAGTCAAGTCTTCCAATTC +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKLGVCI*SQVFQF
Trigger: GAATTGGAAGACTTGACTGCAAATACAAACACCCAG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCTGGGTGTTTGTATTTaGAGTCAAGTCTTCCAATTC +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPLGVCI*SQVFQF
Trigger: GAATTGGAAGACTTGACTGCAAATACAAACACCCAG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAGTTCAGCCATTTCCTaGTGGAGCTTTATCAGGTTA +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDSSAIS*WSFIRL
Trigger: TAACCTGATAAAGCTCCAGCAGGAAATGGCTGAACT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCTGCTTTTTCTGATGTaGTTTGTTCTGGATTTCGCA +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKLLFLM*FVLDFA
Trigger: TGCGAAATCCAGAACAAAGCACATCAGAAAAAGCAG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352993.7
ENST00000357654.9
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATACTGGTAGAACTATCTaGAGACACCTCAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDTGRTI*RHLKLV
Trigger: GACAAGTTTGAGGTGTCTGCAGATAGTTCTACCAGT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp CAAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAAACTCTGGGCAGATTCTaGAACTTTCAATTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: QNYSCLHTPNLCQAEKHKTLGRF*NFQLGN
Trigger: GTTCCCCAATTGAAAGTTGCAGAATCTGCCCAGAGT...TTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCTCAACTCCAGACAGATaGGACACTCTAAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSSTPDR*DTLRFS
Trigger: AGAAAATCTTAGAGTGTCCCATCTGTCTGGAGTTGA...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTCAACTCCAGACAGATaGGACACTCTAAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKSTPDR*DTLRFS
Trigger: AGAAAATCTTAGAGTGTCCCATCTGTCTGGAGTTGA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp CAAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAAGAAGGCCCTTTCTTCTaGTTGAGAAGTTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: QNYSCLHTPNLCQAEKHKEGPFF*LRSFSM
Trigger: CATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTC...TTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461221.5
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp AAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATCCAAGGTTAGAGAGTTaGACACTGAGACTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: KIIAVCILQTCVKLKSTNPRLES*TLRLVS
Trigger: GGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGG...ATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461221.5
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCCTGCACGCTTCTCAGTaGTGTTCAAATCATTATTAC +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSLHASQ*CSNHYY
Trigger: GTAATAATGATTTGAACACCACTGAGAAGCGTGCAG...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCATACATCAGCTACTTTaGCATTTGATTCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSIHQLL*HLIQTP
Trigger: GGGAGTCTGAATCAAATGCCAAAGTAGCTGATGTAT...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGTACTCTCTACTGATTTaGAGTGAACTCTTTCACTTT +
Preference number: 4 (lower is better)
Translates to: LSCTLLSGVQIIITGLMMYSLLI*SELFHF
Trigger: AAAGTGAAAGAGTTCACTCCAAATCAGTAGAGAGTA...CATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAGATTTTCAGTTACATaGCTTAAGTTGGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPRFSVT*LKLGRL
Trigger: AAGCCTCCCCAACTTAAGCCATGTAACTGAAAATCT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp CAACTTTCAATTGGGGAACTTTCAATGCAGAGGTTGAAGATGGTATGTTGCCAACTCTTGTATTATCTGTaGCTCAGTAACAAATGCTCC +
Preference number: 4 (lower is better)
Translates to: QLSIGELSMQRLKMVCCQLLYYL*LSNKCS
Trigger: GGAGCATTTGTTACTGAGCCACAGATAATACAAGAG...TTGGCAACATACCATCTTCAACCTCTGCATTGAAAGTTCCCCAATTGAAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTCTGCTGTGCCTGACTaGCATTTGGTTGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDSAVPD*HLVVLF
Trigger: AAAAAGTACAACCAAATGCCAGTCAGGCACAGCAGA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGACTTGTCTGTTCATTTaGCTTGTTACTCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKTCLFI*LVTLLG
Trigger: GCCAAGAAGAGTAACAAGCCAAATGAACAGACAAGT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp TCTGCAACTTTCAATTGGGGAACTTTCAATGCAGAGGTTGAAGATGGTATGTTGACTTGTCTGTTCATTTaGCTTGTTACTCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SATFNWGTFNAEVEDGMLTCLFI*LVTLLG
Trigger: GCCAAGAAGAGTAACAAGCCAAATGAACAGACAAGT...CAACATACCATCTTCAACCTCTGCATTGAAAGTTCCCCAATTGAAAGTTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCTTGTTTCCCGACTGTaGTTAACTTCATGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDLVSRL*LTSCPN
Trigger: ATTGGGACATGAAGTTAACCACAGTCGGGAAACAAG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAACGGAGCAAATGACTaGCGCTTTGAAACCTTGAAT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDNGAND*RFETLN
Trigger: ATTCAAGGTTTCAAAGCGCCAGTCATTTGCTCCGTT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCGATGGGAAAAAGTGGTaGTATACGATATGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPDGKKW*YTIWVL
Trigger: CAAAACCCATATCGTATACCACCACTTTTTCCCATC...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTGTGCTCACTGTACTTaGAATGTTCTCATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPCAHCT*NVLISH
Trigger: ATGGGAAATGAGAACATTCCAAGTACAGTGAGCACA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTGTGCTCACTGTACTTaGAATGTTCTCATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKCAHCT*NVLISH
Trigger: ATGGGAAATGAGAACATTCCAAGTACAGTGAGCACA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTATCCCTCTGCTGAGTaGTTAAAATGTCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDYPSAE*LKCHSE
Trigger: CTCAGAGTGACATTTTAACCACTCAGCAGAGGGATA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTCAGCCATTTCCTGCTaGAGCTTTATCAGGTTATGT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDSAISC*SFIRLC
Trigger: ACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAGGCCTTCTGGATTCTaGCTTATAGGGTATTCACTA +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDRPSGF*LIGYSL
Trigger: TAGTGAATACCCTATAAGCCAGAATCCAGAAGGCCT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGAGCTCCTCTTGAGATaGGTAGTTTCTATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDELLLR*VVSILK
Trigger: CTTCAGAATAGAAACTACCCATCTCAAGAGGAGCTC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAAGATCTTTCTGTCCTaGGATTCTCTTGCTCGCTTT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDKIFLS*DSLARF
Trigger: AAAGCGAGCAAGAGAATCCCAGGACAGAAAGATCTT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp TGGTGTTCAAATCATTATTACTGGGTTGATGATGTTCAGTATTTGTTACATCCGATAGTCCCAGCTACTTaGGAGACTGAGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: WCSNHYYWVDDVQYLLHPIVPAT*ETEVIG
Trigger: TCCTATCACCTCAGTCTCCCAAGTAGCTGGGACTAT...CGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAACACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492859.5
CDS-3UTR TCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGTTCTTTCTGTTCCAATaGACTTTACCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKFFLFQ*TLPRAE
Trigger: CTCTGCTCTGGGTAAAGTTCATTGGAACAGAAAGAA...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGAGCTCTTCAACAAGTTaGCTAAATCTCGTACTTTCT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKSSSTS*LNLVLS
Trigger: AGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp ACCCAGATGCTGCTTCACCTAAGTTTGAATCCATGCTTTGCTCTTCTTGATTATAGCTCTTCAACAAGTTaGCTAAATCTCGTACTTTCT +
Preference number: 4 (lower is better)
Translates to: TQMLLHLSLNPCFALLDYSSSTS*LNLVLS
Trigger: AGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCT...ATAATCAAGAAGAGCAAAGCATGGATTCAAACTTAGGTGAAGCAGCATCTGGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGAAACCTGTGTCAAGCTaGAAAGCACAAATGATTTTC +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKKPVSS*KAQMIF
Trigger: GAAAATCATTTGTGCTTTTCAGCTTGACACAGGTTT...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCAAACCTGTGTCAAGCTaGAAAGCACAAATGATTTTC +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSKPVSS*KAQMIF
Trigger: GAAAATCATTTGTGCTTTTCAGCTTGACACAGGTTT...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp ATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATGATTTTCTCCACATGCAAGTTTaGAACAGAACTACCCTGATA +
Preference number: 4 (lower is better)
Translates to: IAVCILQTCVKLKSTNDFLHMQV*NRTTLI
Trigger: TATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAG...AAAATCATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp TTCATTCTGTCTTTAGTGAGTAATAAACTGCTGTTCTCATGCTGTAATGAGCTGCTCCACATGCAAGTTTaGAACAGAACTACCCTGATA +
Preference number: 4 (lower is better)
Translates to: FILSLVSNKLLFSCCNELLHMQV*NRTTLI
Trigger: TATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAG...CAGCTCATTACAGCATGAGAACAGCAGTTTATTACTCACTAAAGACAGAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp CTTCTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCATCTCTAGGATTCTCTaGGCATGGCAGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LLIGRTGFTFMSHKMIKFISRIL*AWQFLL
Trigger: AAGCAGAAACTGCCATGCTCAGAGAATCCTAGAGAT...GAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp AAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATAGCTACTTTGGCATTTaGTTCAGACTCCCCATCATG +
Preference number: 4 (lower is better)
Translates to: KIIAVCILQTCVKLKSTNSYFGI*FRLPIM
Trigger: CATGATGGGGAGTCTGAATCAAATGCCAAAGTAGCT...ATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR TCA 90 bp AAAATGAAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGCATATTAAAGCCTCATaGGGATCACTGGCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: KMKPEVSPPVIRMLKLIQHIKAS*GSLASK
Trigger: CTTACTGGCCAGTGATCCTCATGAGGCTTTAATATG...CTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCGCTTTAATTTATTTGTaGGGGGACGCTCTTGTATTA +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSALIYL*GDALVL
Trigger: TAATACAAGAGCGTCCCCTCACAAATAAATTAAAGC...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp CTAATGTTATTACGGCTAATTGTGCTCACTGTACTTGGAATGTTCTCATTTCCCATTTCAGGAGTCTTTTaGACTGCCAAATCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LMLLRLIVLTVLGMFSFPISGVF*TAKSAF
Trigger: GAAAGCAGATTTGGCAGTTCAAAAGACTCCTGAAAT...GGGAAATGAGAACATTCCAAGTACAGTGAGCACAATTAGCCGTAATAACATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp ATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATGATGGCTTAGATTTCTACTaGCTACTAGTTCAAGCGCAT +
Preference number: 4 (lower is better)
Translates to: IIAVCILQTCVKLKSTNDGLDFY*LLVQAH
Trigger: ATGCGCTTGAACTAGTAGTCAGTAGAAATCTAAGCC...ATCATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGGTTCTTTACCTTCCATaGGTTGTAGGTTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKVLYLP*VVGFCC
Trigger: ACAGCAGAAACCTACAACTCATGGAAGGTAAAGAAC...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGTCTTTGGAACAACCATaGATTAGTCCCTTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKSLEQP*ISPLGF
Trigger: AAACCCCAAGGGACTAATTCATGGTTGTTCCAAAGA...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCCTATGCCTAGTAGACTaGGAAGGTATATTGTTTACT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPLCLVD*EGILFT
Trigger: AGTAAACAATATACCTTCTCAGTCTACTAGGCATAG...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR TCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTTCATTCAGTCAAAGATaGCGTCCTAGCTGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLSFSQR*RPSCVK
Trigger: CTTCACACAGCTAGGACGTCATCTTTGACTGAATGA...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp CAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGTTTCAGCATGCAAAATTTaGAAAATATGTGGTCACACT +
Preference number: 4 (lower is better)
Translates to: QLHASQWCSNHYYWVDDVSACKI*KICGHT
Trigger: AGTGTGACCACATATTTTGCAAATTTTGCATGCTGA...AACATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGCACACTGCAATAAGTTaGCTTATTAACGGTATCTTC +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKHTAIS*LINGIF
Trigger: GAAGATACCGTTAATAAGGCAACTTATTGCAGTGTG...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCACAGATCTTTCAGTTTaGAAAACCCTTTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPTDLSV*KTLSPL
Trigger: AAGTGGAGAAAGGGTTTTGCAAACTGAAAGATCTGT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAGATACTTTCCTGAGTaGCATAATCAGTACCAGGTA +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDRYFPE*HNQYQV
Trigger: TACCTGGTACTGATTATGGCACTCAGGAAAGTATCT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTCTTGGGGTTTTCAAATaGTGCACACTGACTCACACA +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLLGVFK*CTLTHT
Trigger: TGTGTGAGTCAGTGTGCAGCATTTGAAAACCCCAAG...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp CTTCTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCGTGGGCAGAGAATGTTaGACATTCCTCTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: LLIGRTGFTFMSHKMIKFVGREC*TFLFCI
Trigger: AATGCAGAAGAGGAATGTGCAACATTCTCTGCCCAC...GAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp AAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATGTGGGCAGAGAATGTTaGACATTCCTCTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: KIIAVCILQTCVKLKSTNVGREC*TFLFCI
Trigger: AATGCAGAAGAGGAATGTGCAACATTCTCTGCCCAC...ATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp CCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGTTCCTGAGATGCCTTTaGCAATATTACCTGGTTACT +
Preference number: 4 (lower is better)
Translates to: PEVSPPVIRMLKLIQSKMFLRCL*QYYLVT
Trigger: AGTAACCAGGTAATATTGGCAAAGGCATCTCAGGAA...CATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTTCCTGAGATGCCTTTaGCAATATTACCTGGTTACT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDFLRCL*QYYLVT
Trigger: AGTAACCAGGTAATATTGGCAAAGGCATCTCAGGAA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp CCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGCTGGGTGTTTGTATTTaGAGTCAAGTCTTCCAATTC +
Preference number: 4 (lower is better)
Translates to: PEVSPPVIRMLKLIQSKMLGVCI*SQVFQF
Trigger: GAATTGGAAGACTTGACTGCAAATACAAACACCCAG...CATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTCAACTCCAGACAGATaGGACACTCTAAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDSTPDR*DTLRFS
Trigger: AGAAAATCTTAGAGTGTCCCATCTGTCTGGAGTTGA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp CTTCTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCGAAGGCCCTTTCTTCTaGTTGAGAAGTTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: LLIGRTGFTFMSHKMIKFEGPFF*LRSFSM
Trigger: CATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTC...GAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp AGAAAATATTTCAGTGTCCGTTCACACACAAACTCAGCATCTGTTTTCATAACATCTGTAGAAGTCTTTTaGCACGGTTTCTGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: RKYFSVRSHTNSASVFITSVEVF*HGFCSP
Trigger: TGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGA...TGTTATGAAAACAGATGCTGAGTTTGTGTGTGAACGGACACTGAAATATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp AAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATTCTGTAGAAGTCTTTTaGCACGGTTTCTGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: KIIAVCILQTCVKLKSTNSVEVF*HGFCSP
Trigger: TGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGA...ATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000461221.5
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCTGCACGCTTCTCAGTaGTGTTCAAATCATTATTAC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDLHASQ*CSNHYY
Trigger: GTAATAATGATTTGAACACCACTGAGAAGCGTGCAG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CCA 90 bp AAAATGAAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGCATGCTGTAATGAGCTaGCATGAGTATTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: KMKPEVSPPVIRMLKLIQHAVMS*HEYLCH
Trigger: GTGGCACAAATACTCATGCCAGCTCATTACAGCATG...CTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATATACATCAGCTACTTTaGCATTTGATTCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDIHQLL*HLIQTP
Trigger: GGGAGTCTGAATCAAATGCCAAAGTAGCTGATGTAT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGTCTGCTGTGCCTGACTaGCATTTGGTTGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKSAVPD*HLVVLF
Trigger: AAAAAGTACAACCAAATGCCAGTCAGGCACAGCAGA...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTGCTTGTTACTCTTCTTaGCTCCAGTTGCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLACYSS*LQLQVL
Trigger: AAGAACCTGCAACTGGAGCCAAGAAGAGTAACAAGC...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCTTGATGGGAAAAAGTaGTGGTATACGATATGGGTT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDLDGKK*WYTIWV
Trigger: AACCCATATCGTATACCACCACTTTTTCCCATCAAG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGCCAAATAACAAGTGTTaGAAGCAGGGAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKPNNKC*KQGSSS
Trigger: TGAAGAGCTTCCCTGCTTCCAACACTTGTTATTTGG...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCGATGCCTCATTTGTTTaGAAGAACCAATCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPDASFV*KNQSRK
Trigger: CTTTCTTGATTGGTTCTTCCAAACAAATGAGGCATC...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATATTTATGAAGCTGTATaGTTTCAGCAACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDIYEAV*FQQQGA
Trigger: TGCTCCCTGTTGCTGAAACCATACAGCTTCATAAAT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp CCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGTCTCATTGGCAGGACTaGATTTACTTTCATGTCACA +
Preference number: 4 (lower is better)
Translates to: PEVSPPVIRMLKLIQSKMSHWQD*IYFHVT
Trigger: TGTGACATGAAAGTAAATCCAGTCCTGCCAATGAGA...CATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAGCTCTTCAACAAGTTaGCTAAATCTCGTACTTTCT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDSSSTS*LNLVLS
Trigger: AGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR TCA 90 bp CAAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATGGTTCCTTGAGGGGTaGTTTGTAACAATTCTTGAT +
Preference number: 4 (lower is better)
Translates to: QNYSCLHTPNLCQAEKHKWFLEG*FVTILD
Trigger: ATCAAGAATTGTTACAAATCACCCCTCAAGGAACCA...TTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGCTTTAATTTATTTGTaGGGGGACGCTCTTGTATTA +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDALIYL*GDALVL
Trigger: TAATACAAGAGCGTCCCCTCACAAATAAATTAAAGC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR TCA 90 bp AAAATGAAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGGTAATATTCATCACTTaGCCATTCTGCTCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: KMKPEVSPPVIRMLKLIQVIFIT*PFCSVW
Trigger: CCAAACGGAGCAGAATGGTCAAGTGATGAATATTAC...CTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp GTTCAAATCATTATTACTGGGTTGATGATGTTCAGTATTTGTTACATCCGTCTCGTAATATTCATCACTTaGCCATTCTGCTCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: VQIIITGLMMFSICYIRLVIFIT*PFCSVW
Trigger: CCAAACGGAGCAGAATGGTCAAGTGATGAATATTAC...GAGACGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp TGGTGTTCAAATCATTATTACTGGGTTGATGATGTTCAGTATTTGTTACATCCGTCTTTGGAACAACCATaGATTAGTCCCTTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: WCSNHYYWVDDVQYLLHPSLEQP*ISPLGF
Trigger: AAACCCCAAGGGACTAATTCATGGTTGTTCCAAAGA...CGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAACACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGGGCGCTTTGAAACCTTaGATGTATTCTGCAAATACT +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKGALKP*MYSANT
Trigger: AGTATTTGCAGAATACATTCAAGGTTTCAAAGCGCC...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp AAAATGAAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGCAATTCACTGCACTGTaGAGAAAACAAGCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: KMKPEVSPPVIRMLKLIQQFTAL*RKQASR
Trigger: TCTGCTAGCTTGTTTTCTTCACAGTGCAGTGAATTG...CTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp CTAATGTTATTACGGCTAATTGTGCTCACTGTACTTGGAATGTTCTCATTTCCCTCTTTCTTCATCATCTaGAACCAATTCCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: LMLLRLIVLTVLGMFSFPSFFII*NQFLVT
Trigger: AGTGACAAGGAATTGGTTTCAGATGATGAAGAAAGA...GGGAAATGAGAACATTCCAAGTACAGTGAGCACAATTAGCCGTAATAACATTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AGAAAATATTTCAGTGTCCGTTCACACACAAACTCAGCATCTGTTTTCATAACATTTCAATGCAGAGGTTaGAGATGGTATGTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: RKYFSVRSHTNSASVFITFQCRG*RWYVAN
Trigger: GTTGGCAACATACCATCTTCAACCTCTGCATTGAAA...TGTTATGAAAACAGATGCTGAGTTTGTGTGTGAACGGACACTGAAATATTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTCAGCATGCAAAATTTaGAAAATATGTGGTCACACT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPSACKI*KICGHT
Trigger: AGTGTGACCACATATTTTGCAAATTTTGCATGCTGA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCACACTGCAATAAGTTaGCTTATTAACGGTATCTTC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDHTAIS*LINGIF
Trigger: GAAGATACCGTTAATAAGGCAACTTATTGCAGTGTG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR GCA 90 bp AAAATGAAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGCCACATGGCTCCACATaGAAGTTTGAAACAGAACTA +
Preference number: 4 (lower is better)
Translates to: KMKPEVSPPVIRMLKLIQPHGST*KFETEL
Trigger: TAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGG...CTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp TGGTGTTCAAATCATTATTACTGGGTTGATGATGTTCAGTATTTGTTACATCCGCCACATGGCTCCACATaGAAGTTTGAAACAGAACTA +
Preference number: 4 (lower is better)
Translates to: WCSNHYYWVDDVQYLLHPPHGST*KFETEL
Trigger: TAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGG...CGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAACACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGTACCAATGAAATACTaGTACTCTCTACAGATCTTT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKVPMKY*YSLQIF
Trigger: AAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTAC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR GCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGAGATACTTTCCTGAGTaGCATAATCAGTACCAGGTA +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKRYFPE*HNQYQV
Trigger: TACCTGGTACTGATTATGGCACTCAGGAAAGTATCT...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp ATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATGATAGATACTTTCCTGAGTaGCATAATCAGTACCAGGTA +
Preference number: 4 (lower is better)
Translates to: IIAVCILQTCVKLKSTNDRYFPE*HNQYQV
Trigger: TACCTGGTACTGATTATGGCACTCAGGAAAGTATCT...ATCATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp CTTCTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCGGGGTTTTCAAATGCTaGACACTGACTCACACATTT +
Preference number: 4 (lower is better)
Translates to: LLIGRTGFTFMSHKMIKFGVFKC*TLTHTF
Trigger: AAATGTGTGAGTCAGTGTGCAGCATTTGAAAACCCC...GAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGTTTCTTCCATTTCTATaGTTGTTTCCCGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKFLPFL*LFPDCG
Trigger: ACCACAGTCGGGAAACAAGCATAGAAATGGAAGAAA...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp AAAATGAAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGAACCACAGGAAAGCCTaGAGTGATATTAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: KMKPEVSPPVIRMLKLIQNHRKA*SDINCL
Trigger: CAGACAGTTAATATCACTGCAGGCTTTCCTGTGGTT...CTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp CTTCTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCAGAACAAACCTGAGATaGATGACTACTTCCCATAGG +
Preference number: 4 (lower is better)
Translates to: LLIGRTGFTFMSHKMIKFRTNLR*MTTSHR
Trigger: CCTATGGGAAGTAGTCATGCATCTCAGGTTTGTTCT...GAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp ATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATGATTTTTTCCTGAGATGCCTTTaGCAATATTACCTGGTTACT +
Preference number: 4 (lower is better)
Translates to: IAVCILQTCVKLKSTNDFFLRCL*QYYLVT
Trigger: AGTAACCAGGTAATATTGGCAAAGGCATCTCAGGAA...AAAATCATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAATCTTTTTCTGATGTaGTTTGTTCTGGATTTCGCA +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPNLFLM*FVLDFA
Trigger: TGCGAAATCCAGAACAAAGCACATCAGAAAAAGATT...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCTTTGGCCATGTATATaGGAATCTTTTTCTGATGTG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDLWPCI*ESFSDV
Trigger: CACATCAGAAAAAGATTCGCATATACATGGCCAAAG...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471181.7
ENST00000644379.1
CDS-3UTR GCA 90 bp AAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATGAGGGAGACACTGTTTaGAAAATATGTGGTCACACT +
Preference number: 4 (lower is better)
Translates to: KIIAVCILQTCVKLKSTNEGDTV*KICGHT
Trigger: AGTGTGACCACATATTTTGCAAACAGTGTCTCCCTC...ATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642945.1
CDS-3UTR CCA 90 bp CAAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAAATACATCAGCTACTTTaGCATTTGATTCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: QNYSCLHTPNLCQAEKHKIHQLL*HLIQTP
Trigger: GGGAGTCTGAATCAAATGCCAAAGTAGCTGATGTAT...TTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR CCA 90 bp AAAATGAAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGCCTCATGAGGATCACTaGCCAGTAAGTCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: KMKPEVSPPVIRMLKLIQPHEDH*PVSLFS
Trigger: AGAAAATAGACTTACTGGCCAGTGATCCTCATGAGG...CTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTACTCTCTACTGATTTaGAGTGAACTCTTTCACTTT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKYSLLI*SELFHF
Trigger: AAAGTGAAAGAGTTCACTCCAAATCAGTAGAGAGTA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGAGATTTTCAGTTACATaGCTTAAGTTGGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKRFSVT*LKLGRL
Trigger: AAGCCTCCCCAACTTAAGCCATGTAACTGAAAATCT...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCGGTGCTTTTGAATTGTaGATATTTAATTCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPGAFEL*IFNSSS
Trigger: GGAACTCGAATTAAATATCCACAATTCAAAAGCACC...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGGTGCTTTTGAATTGTaGATATTTAATTCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKGAFEL*IFNSSS
Trigger: GGAACTCGAATTAAATATCCACAATTCAAAAGCACC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp AAAATGAAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGCATGAATTAGTCCCTTaGGGTTTTCAAATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: KMKPEVSPPVIRMLKLIQHELVP*GFQMLH
Trigger: GTGCAGCATTTGAAAACCCCAAGGGACTAATTCATG...CTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTTTGGCATTATCAACTaGCTTATCTTTCTGACCAAC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDFGIIN*LIFLTN
Trigger: GTTGGTCAGAAAGATAAGCCAGTTGATAATGCCAAA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCAAGTCCATGTTTATTTaGAGTAATGAGTCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSKSMFI*SNESSF
Trigger: GAAACTGGACTCATTACTCCAAATAAACATGGACTT...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGATGCCTCATTTGTTTaGAAGAACCAATCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDDASFV*KNQSRK
Trigger: CTTTCTTGATTGGTTCTTCCAAACAAATGAGGCATC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp AAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATTATCCCTCTGCTGAGTaGTTAAAATGTCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: KIIAVCILQTCVKLKSTNYPSAE*LKCHSE
Trigger: CTCAGAGTGACATTTTAACCACTCAGCAGAGGGATA...ATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp GGTGTTCAAATCATTATTACTGGGTTGATGATGTTCAGTATTTGTTACATCCGTAGGCCTTCTGGATTCTaGCTTATAGGGTATTCACTA +
Preference number: 4 (lower is better)
Translates to: GVQIIITGLMMFSICYIRRPSGF*LIGYSL
Trigger: TAGTGAATACCCTATAAGCCAGAATCCAGAAGGCCT...ACGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAACACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTTAGTTAAAGTGATGTaGTGTTTTCTGGCAAACTTG +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPLVKVM*CFLANL
Trigger: CAAGTTTGCCAGAAAACACCACATCACTTTAACTAA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTTAGTTAAAGTGATGTaGTGTTTTCTGGCAAACTTG +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKLVKVM*CFLANL
Trigger: CAAGTTTGCCAGAAAACACCACATCACTTTAACTAA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAGCATCTTGCTCAATTaGTGGCGTTTAAATGGTTTT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDSILLN*WRLNGF
Trigger: AAAACCATTTAAACGCCACCAATTGAGCAAGATGCT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTTAGAAGACTGTCTTTaGAAACCGGTTCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: TFENCPRTILTLSHIIDPLEDCL*KPVLEN
Trigger: ATTTTCAAGAACCGGTTTCCAAAGACAGTCTTCTAA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTTAGAAGACTGTCTTTaGAAACCGGTTCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: FENCPRTILTLSHIIDPKLEDCL*KPVLEN
Trigger: ATTTTCAAGAACCGGTTTCCAAAGACAGTCTTCTAA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp GTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGATGACGTCCTTGCTTTGGGACACCTaGATTTGCTTTTATAAAATG +
Preference number: 4 (lower is better)
Translates to: VSPPVIRMLKLIQSKMTSLLWDT*ICFYKM
Trigger: CATTTTATAAAAGCAAATCCAGGTGTCCCAAAGCAA...GGACGTCATCTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354071.7
3UTR CAA 72 bp GTTTGCAAAACCCTTTCTCCACTTAACATGAGATCTTaGGGGTCTTCAGCATTATTAGACACTTTAACTGTT +
Preference number: 4 (lower is better)
Translates to: VCKTLSPLNMRS*GSSALLDTLTV
Trigger: AACAGTTAAAGTGTCTAATAATGCTGAAGACCCCAAAGATCTCATGTTAAGTGGAGAAAGGGTTTTGCAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp CAAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAAAAACCTGTGTCAAGCTaGAAAGCACAAATGATTTTC +
Preference number: 4 (lower is better)
Translates to: QNYSCLHTPNLCQAEKHKKPVSS*KAQMIF
Trigger: GAAAATCATTTGTGCTTTTCAGCTTGACACAGGTTT...TTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTTG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000461221.5
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR TCA 90 bp AAAATGAAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTGGTTCCTTGAGGGGTaGTTTGTAACAATTCTTGAT +
Preference number: 4 (lower is better)
Translates to: KMKPEVSPPVIRMLKLIQWFLEG*FVTILD
Trigger: ATCAAGAATTGTTACAAATCACCCCTCAAGGAACCA...CTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTTCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp GGTGTTCAAATCATTATTACTGGGTTGATGATGTTCAGTATTTGTTACATCCGTTGGTTCCTTGAGGGGTaGTTTGTAACAATTCTTGAT +
Preference number: 4 (lower is better)
Translates to: GVQIIITGLMMFSICYIRWFLEG*FVTILD
Trigger: ATCAAGAATTGTTACAAATCACCCCTCAAGGAACCA...ACGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAACACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATAAAATTATAGCTGTTTaGATACTCCAAACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDKIIAV*ILQTCV
Trigger: GACACAGGTTTGGAGTATGCAAACAGCTATAATTTT...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR GCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGTACCAATGAAATACTaGTACTCTCTACAGATCTTT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDVPMKY*YSLQIF
Trigger: AAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTAC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTCTCTTGTATTATCTGTaGCTCAGTAACAAATGCTCC +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLLLYYL*LSNKCS
Trigger: GGAGCATTTGTTACTGAGCCACAGATAATACAAGAG...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CTAATGTTATTACGGCTAATTGTGCTCACTGTACTTGGAATGTTCTCATTTCCCGGTGCTTTTGAATTGTaGATATTTAATTCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LMLLRLIVLTVLGMFSFPGAFEL*IFNSSS
Trigger: GGAACTCGAATTAAATATCCACAATTCAAAAGCACC...GGGAAATGAGAACATTCCAAGTACAGTGAGCACAATTAGCCGTAATAACATTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTACTTGTCTGTTCATTTaGCTTGTTACTCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLTCLFI*LVTLLG
Trigger: GCCAAGAAGAGTAACAAGCCAAATGAACAGACAAGT...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGTTTGGCATTATCAACTaGCTTATCTTTCTGACCAAC +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKFGIIN*LIFLTN
Trigger: GTTGGTCAGAAAGATAAGCCAGTTGATAATGCCAAA...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp AAAATGAAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGGATGGGAAAAAGTGGTaGTATACGATATGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: KMKPEVSPPVIRMLKLIQDGKKW*YTIWVL
Trigger: CAAAACCCATATCGTATACCACCACTTTTTCCCATC...CTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTTCATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CTTCTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTGATGGGAAAAAGTaGTGGTATACGATATGGGTT +
Preference number: 4 (lower is better)
Translates to: LLIGRTGFTFMSHKMIKFLDGKK*WYTIWV
Trigger: AACCCATATCGTATACCACCACTTTTTCCCATCAAG...GAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTTGTGCTCACTGTACTTaGAATGTTCTCATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLCAHCT*NVLISH
Trigger: ATGGGAAATGAGAACATTCCAAGTACAGTGAGCACA...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTTTGCCAATATTACCTaGTTACTGCAGTCATTTAAG +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDFANIT*LLQSFK
Trigger: CTTAAATGACTGCAGTAACCAGGTAATATTGGCAAA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CCA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTTAGAAGACTGTCTTTaGAAACCGGTTCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: PTFENCPRTILTLSHIIDLEDCL*KPVLEN
Trigger: ATTTTCAAGAACCGGTTTCCAAAGACAGTCTTCTAA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGTTAAATTCCTTGCTTTaGGACACCTGGATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKLNSLL*DTWICF
Trigger: AAAGCAAATCCAGGTGTCCCAAAGCAAGGAATTTAA...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp CTTCTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCAGCTCTTCAACAAGTTaGCTAAATCTCGTACTTTCT +
Preference number: 4 (lower is better)
Translates to: LLIGRTGFTFMSHKMIKFSSSTS*LNLVLS
Trigger: AGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCT...GAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTGTATTCTGCAAATACTaGGCATCAAGTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLVFCKY*ASSSLS
Trigger: AGAAAGTGAACTTGATGCTCAGTATTTGCAGAATAC...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp CTTCTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTATGCCTAGTAGACTaGGAAGGTATATTGTTTACT +
Preference number: 4 (lower is better)
Translates to: LLIGRTGFTFMSHKMIKFLCLVD*EGILFT
Trigger: AGTAAACAATATACCTTCTCAGTCTACTAGGCATAG...GAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR TCA 90 bp AAGGTATATTGTTTACTTTACCAAATAACAAGTGTTGGAAGCAGGGAAGCTCTTCTATGCCTAGTAGACTaGGAAGGTATATTGTTTACT +
Preference number: 4 (lower is better)
Translates to: KVYCLLYQITSVGSREALLCLVD*EGILFT
Trigger: AGTAAACAATATACCTTCTCAGTCTACTAGGCATAG...AAGAGCTTCCCTGCTTCCAACACTTGTTATTTGGTAAAGTAAACAATATACCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR TCA 90 bp AAAATGAAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCTTTCTTCATCATCTaGAACCAATTCCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: KMKPEVSPPVIRMLKLIQSFFII*NQFLVT
Trigger: AGTGACAAGGAATTGGTTTCAGATGATGAAGAAAGA...CTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTTCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGTCAGCATGCAAAATTTaGAAAATATGTGGTCACACT +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKSACKI*KICGHT
Trigger: AGTGTGACCACATATTTTGCAAATTTTGCATGCTGA...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp CACTTTTACATATTAAAGCCTCATGAGGATCACTGGCCAGTAAGTCTATTTTCTAAAATTATAGCTGTTTaGATACTCCAAACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: HFYILKPHEDHWPVSLFSKIIAV*ILQTCV
Trigger: GACACAGGTTTGGAGTATGCAAACAGCTATAATTTT...AGAAAATAGACTTACTGGCCAGTGATCCTCATGAGGCTTTAATATGTAAAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000492859.5
CDS-3UTR GCA 90 bp CTTCTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCACACTGCAATAAGTTaGCTTATTAACGGTATCTTC +
Preference number: 4 (lower is better)
Translates to: LLIGRTGFTFMSHKMIKFHTAIS*LINGIF
Trigger: GAAGATACCGTTAATAAGGCAACTTATTGCAGTGTG...GAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTCTAAGCCAGGCTGTTTaGTTTTATTACAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLLSQAV*FYYRIQ
Trigger: CTGAATTCTGTAATAAAAGCAAACAGCCTGGCTTAG...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp GTTCAAATCATTATTACTGGGTTGATGATGTTCAGTATTTGTTACATCCGTCTCCTAAGCCAGGCTGTTTaGTTTTATTACAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: VQIIITGLMMFSICYIRLLSQAV*FYYRIQ
Trigger: CTGAATTCTGTAATAAAAGCAAACAGCCTGGCTTAG...GAGACGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR GCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTACAGATCTTTCAGTTTaGAAAACCCTTTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLTDLSV*KTLSPL
Trigger: AAGTGGAGAAAGGGTTTTGCAAACTGAAAGATCTGT...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp GTTCAAATCATTATTACTGGGTTGATGATGTTCAGTATTTGTTACATCCGTCTCTTTGGCATTATCAACTaGCTTATCTTTCTGACCAAC +
Preference number: 4 (lower is better)
Translates to: VQIIITGLMMFSICYIRLFGIIN*LIFLTN
Trigger: GTTGGTCAGAAAGATAAGCCAGTTGATAATGCCAAA...GAGACGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp CAAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAAAAGTCCATGTTTATTTaGAGTAATGAGTCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QNYSCLHTPNLCQAEKHKKSMFI*SNESSF
Trigger: GAAACTGGACTCATTACTCCAAATAAACATGGACTT...TTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp AAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGTCAAAGTTTGCCAATATTACCTaGTTACTGCAGTCATTTAAG +
Preference number: 4 (lower is better)
Translates to: KPEVSPPVIRMLKLIQSKFANIT*LLQSFK
Trigger: CTTAAATGACTGCAGTAACCAGGTAATATTGGCAAA...CTTTGACTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTGATGCCTCATTTGTTTaGAAGAACCAATCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLDASFV*KNQSRK
Trigger: CTTTCTTGATTGGTTCTTCCAAACAAATGAGGCATC...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp GTTCAAATCATTATTACTGGGTTGATGATGTTCAGTATTTGTTACATCCGTCTCGATGCCTCATTTGTTTaGAAGAACCAATCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: VQIIITGLMMFSICYIRLDASFV*KNQSRK
Trigger: CTTTCTTGATTGGTTCTTCCAAACAAATGAGGCATC...GAGACGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTGCAAACACAAAAACCTaGTTCCAATACCTAAGTTTG +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLANTKT*FQYLSL
Trigger: CAAACTTAGGTATTGGAACCAGGTTTTTGTGTTTGC...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354071.7
3UTR CAA 72 bp TCAAATCATTATTACTGGGTTGATGATGTTCAGTATTaGTTACATCCGTCTCAGAAAATTCACAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SNHYYWVDDVQY*LHPSQKIHKQP
Trigger: AGGCTGCTTGTGAATTTTCTGAGACGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
3UTR CAA 72 bp TTTATTCTCATGACCACTATTAGTAATATTCATCACTaGACCATTCTGCTCCGTTTGGTTAGTTCCCTGATT +
Preference number: 4 (lower is better)
Translates to: FILMTTISNIHH*TILLRLVSSLI
Trigger: AATCAGGGAACTAACCAAACGGAGCAGAATGGTCAAGTGATGAATATTACTAATAGTGGTCATGAGAATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
3UTR CAA 72 bp AGTTTCTCTTCTTTTTCTTCTCTTGGAAGGCTAGGATaGACAAATTCTTTAAGTTCACTGGTATTTGAACAC +
Preference number: 4 (lower is better)
Translates to: SFSSFSSLGRLG*TNSLSSLVFEH
Trigger: GTGTTCAAATACCAGTGAACTTAAAGAATTTGTCAATCCTAGCCTTCCAAGAGAAGAAAAAGAAGAGAAACT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR GCA 90 bp AAAATTATAGCTGTTTGCATACTCCAAACCTGTGTCAAGCTGAAAAGCACAAATTCAGCATGCAAAATTTaGAAAATATGTGGTCACACT +
Preference number: 4 (lower is better)
Translates to: KIIAVCILQTCVKLKSTNSACKI*KICGHT
Trigger: AGTGTGACCACATATTTTGCAAATTTTGCATGCTGA...ATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000461798.5
CDS-3UTR GCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTAAAATTATAGCTGTTTaGATACTCCAAACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLKIIAV*ILQTCV
Trigger: GACACAGGTTTGGAGTATGCAAACAGCTATAATTTT...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp CTTCTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCTTGAACTGCCAAATCTaGTTTCTTGATAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: LLIGRTGFTFMSHKMIKFLNCQI*FLDKIL
Trigger: GAGGATTTTATCAAGAAAGCAGATTTGGCAGTTCAA...GAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAGAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR GCA 90 bp AAAATGAAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGGTACCAATGAAATACTaGTACTCTCTACAGATCTTT +
Preference number: 4 (lower is better)
Translates to: KMKPEVSPPVIRMLKLIQVPMKY*YSLQIF
Trigger: AAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTAC...CTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTTCATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp CTCATTGGCAGGACTGGATTTACTTTCATGTCACACAAAATGATTAAATTCCTTTACTCTCTACTGATTTaGAGTGAACTCTTTCACTTT +
Preference number: 4 (lower is better)
Translates to: LIGRTGFTFMSHKMIKFLYSLLI*SELFHF
Trigger: AAAGTGAAAGAGTTCACTCCAAATCAGTAGAGAGTA...AAGGAATTTAATCATTTTGTGTGACATGAAAGTAAATCCAGTCCTGCCAATGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CCA 90 bp AAAATGAAACCAGAAGTAAGTCCACCAGTAATTAGGATGTTAAAGCTCATTCAGGGTGCTTTTGAATTGTaGATATTTAATTCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: KMKPEVSPPVIRMLKLIQGAFEL*IFNSSS
Trigger: GGAACTCGAATTAAATATCCACAATTCAAAAGCACC...CTGAATGAGCTTTAACATCCTAATTACTGGTGGACTTACTTCTGGTTTCATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354071.7
CDS-3UTR CAA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCAGACTCTTCCAGCTGTaGCTCCTCCACATCAACAAC +
Preference number: 5 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCRLFQL*LLHINN
Trigger: GTTGTTGATGTGGAGGAGCAACAGCTGGAAGAGTCT...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR CAA 90 bp TCCAACACCCACTCTCGGGTCACCACAGGTGCCTCACACATCTGCCCAATTGCATGTCCTGGGATTCTCTaGCTCGCTTTGGACCTTGGT +
Preference number: 5 (lower is better)
Translates to: SNTHSRVTTGASHICPIACPGIL*LALDLG
Trigger: ACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACA...TGCAATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCATTGCATGGAAGCCATaGTCCTCTGTCCAGGCATCT +
Preference number: 5 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCIAWKP*SSVQAS
Trigger: AGATGCCTGGACAGAGGACAATGGCTTCCATGCAAT...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR CAA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCTCCAAGGTTAGAGAGTaGGACACTGAGACTGGTTTC +
Preference number: 5 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCSKVRE*DTETGF
Trigger: GAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGA...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR CAA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCAGACGTCTTTTGAGGTaGTATCCGCTGCTTTGTCCT +
Preference number: 5 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCRRLLR*YPLLCP
Trigger: AGGACAAAGCAGCGGATACAACCTCAAAAGACGTCT...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGCTGCACAACCACAATaGGGTGGACACCCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSAAQPQ*GGHPVG
Trigger: GCCCACAGGGTGTCCACCCAATTGTGGTTGTGCAGC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468300.5
CDS-3UTR CAA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCTTGTGCTCACTGTACTaGGAATGTTCTCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCLCSLY*ECSHFP
Trigger: TGGGAAATGAGAACATTCCAAGTACAGTGAGCACAA...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGCTGCACAACCACAATaGGGTGGACACCTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSAAQPQ*GGHLCQ
Trigger: TTGGCACAGGTGTCCACCCAATTGTGGTTGTGCAGC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp TGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCCTCACACATCTGACCATTCTGCTCCGTTaGGTTAGTTCCCTGATTTAT +
Preference number: 5 (lower is better)
Translates to: CYTVQHPLSGHHRCLTHLTILLR*VSSLIY
Trigger: ATAAATCAGGGAACTAACCAAACGGAGCAGAATGGT...CAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCTTCTGCAACTTTCAATaGGGGAACTTTCAATGCAGA +
Preference number: 5 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCFCNFQ*GNFQCR
Trigger: TCTGCATTGAAAGTTCCCCAATTGAAAGTTGCAGAA...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTGTCCTGGGATTCTCTaGCTCGCTTTGGACCTTGGT +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSCPGIL*LALDLG
Trigger: ACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGTGGAGACAGGTTCCTaGATCAACTCCAGACAGATG +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSVETGS*INSRQM
Trigger: CATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCAC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp AAGCCATTGTCCTCTGTCCAGGCATCTGGCTGCACAACCACAATTGGGTGGACACAGCTACTTTGGCATTaGATTCAGACTCCCCATCAT +
Preference number: 5 (lower is better)
Translates to: KPLSSVQASGCTTTIGWTQLLWH*IQTPHH
Trigger: ATGATGGGGAGTCTGAATCAAATGCCAAAGTAGCTG...TGTCCACCCAATTGTGGTTGTGCAGCCAGATGCCTGGACAGAGGACAATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTGTGAGGGGACGCTCTaGTATTATCTGTGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSCEGTL*YYLWLS
Trigger: ACTGAGCCACAGATAATACAAGAGCGTCCCCTCACA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CAA 90 bp CGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTGGGCTTGTTACTCTTCTaGGCTCCAGTTGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: RCFVLRVLTVPRLESWTLGLLLF*APVAGS
Trigger: AGAACCTGCAACTGGAGCCAAGAAGAGTAACAAGCC...CAGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAGTCTTCAGAGACGCTaGTTTCACTCTCACACCCAG +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSSLQRR*FHSHTQ
Trigger: CTGGGTGTGAGAGTGAAACAAGCGTCTCTGAAGACT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAGACTCTTCCAGCTGTaGCTCCTCCACATCAACAAC +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSRLFQL*LLHINN
Trigger: GTTGTTGATGTGGAGGAGCAACAGCTGGAAGAGTCT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp TCCAACACCCACTCTCGGGTCACCACAGGTGCCTCACACATCTGCCCAATTGCATCACACTTTCTTCCATaGCATTATACCCAGCAGTAT +
Preference number: 5 (lower is better)
Translates to: SNTHSRVTTGASHICPIASHFLP*HYTQQY
Trigger: ATACTGCTGGGTATAATGCAATGGAAGAAAGTGTGA...TGCAATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp GCACTGGTAGAGTGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCTGTTTTCTGGCAAACTaGTACACGAGCATAAATTCT +
Preference number: 5 (lower is better)
Translates to: ALVECYTVQHPLSGHHRCCFLAN*YTSINS
Trigger: AGAATTTATGCTCGTGTACAAGTTTGCCAGAAAACA...GCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461221.5
ENST00000468300.5
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTGCTCGCTTTGGACCTaGGTGGTTTCTTCCATTGAC +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSCSLWT*VVSSID
Trigger: GTCAATGGAAGAAACCACCAAGGTCCAAAGCGAGCA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGCTGCACAACCACAATaGGGTGGACACCTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAAAQPQ*GGHLCQ
Trigger: TTGGCACAGGTGTCCACCCAATTGTGGTTGTGCAGC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCATTGCATGGAAGCCATaGTCCTCTGTCCAGGCATCT +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSIAWKP*SSVQAS
Trigger: AGATGCCTGGACAGAGGACAATGGCTTCCATGCAAT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTGGGGTTTCACCATGTaGGCCAGGCTGGTTTCGAAC +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAWGFTM*ARLVSN
Trigger: GTTCGAAACCAGCCTGGCCAACATGGTGAAACCCCA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTGCCGTGGTATGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCACRGMI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCATACCACGGCA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp GTTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGGTGGAGACAGGTTCCTaGATCAACTCCAGACAGATG +
Preference number: 5 (lower is better)
Translates to: VSCKEGFSGSLCRSLLARVETGS*INSRQM
Trigger: CATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCAC...CCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGGCCCTTTCTTCTGGTaGAGAAGTTTCAGCATGCAA +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSGPFFW*RSFSMQ
Trigger: TTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGCC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp TGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTGCCACATGGCTCCAAGCTGGCATGAGTATTaGTGCCACATGGCTCCACAT +
Preference number: 5 (lower is better)
Translates to: CCSHAVMSWHEYLCHMAPSWHEY*CHMAPH
Trigger: ATGTGGAGCCATGTGGCACAAATACTCATGCCAGCT...TGGAGCCATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CAA 90 bp TTCTGTGCTGGGAGTCCGCCTATCATTACATGTTTCCTTACTTCCAGCCCATCTAGTCTTCAGAGACGCTaGTTTCACTCTCACACCCAG +
Preference number: 5 (lower is better)
Translates to: FCAGSPPIITCFLTSSPSSLQRR*FHSHTQ
Trigger: CTGGGTGTGAGAGTGAAACAAGCGTCTCTGAAGACT...AGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGTTGAAGATGGTATGTaGCCAACACGAGCTGACTCT +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSVEDGM*PTRADS
Trigger: AGAGTCAGCTCGTGTTGGCAACATACCATCTTCAAC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp TGCTACACTGTCCAACACCCACTCTCGGGTCACCACAGGTGCCTCACACATCTGTGTTTTCTGGCAAACTaGTACACGAGCATAAATTCT +
Preference number: 5 (lower is better)
Translates to: CYTVQHPLSGHHRCLTHLCFLAN*YTSINS
Trigger: AGAATTTATGCTCGTGTACAAGTTTGCCAGAAAACA...CAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCATTCTCTTGCTCGCTTaGGACCTTGGTGGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSILLLA*DLGGFF
Trigger: GAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAAT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTGTCCTGGGATTCTCTaGCTCGCTTTGGACCTTGGT +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCACPGIL*LALDLG
Trigger: ACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp CGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTGTACCATCCATTCCAGTaGATCTGTGGGCATGTTGGT +
Preference number: 5 (lower is better)
Translates to: RCFVLRVLTVPRLESWTLYHPFQ*ICGHVG
Trigger: ACCAACATGCCCACAGATCAACTGGAATGGATGGTA...CAGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp CTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATGATGGCTGCACAACCACAATaGGGTGGACACCTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: LSCTLLSGVQIIITGLMMAAQPQ*GGHLCQ
Trigger: TTGGCACAGGTGTCCACCCAATTGTGGTTGTGCAGC...CATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGTTCCACTCCAACATTaGAGAACTGCCCAAGGACTA +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSVPLQH*RTAQGL
Trigger: TAGTCCTTGGGCAGTTCTCAAATGTTGGAGTGGAAC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS GCA 90 bp CCCAGATGCTGCTTCACCCTGATACTTTTCTGGATGCCTCTCAGCTaGACGCTTCTCAGTGGTGTTCAAATCATTATTACTGGGTTGATG +
Preference number: 5 (lower is better)
Translates to: PRCCFTLILFWMPLS*TLLSGVQIIITGLM
Trigger: CATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGTGAAGCAGCATCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000468300.5
ENST00000478531.5
ENST00000484087.5
ENST00000487825.5
ENST00000491747.6
ENST00000493919.5
CDS-3UTR CAA 90 bp ATGAGCTGGCATGAGTATTTGTGCCACATGGCTCCACATGCAAGTTTGAAACAGGTGGAGACAGGTTCCTaGATCAACTCCAGACAGATG +
Preference number: 5 (lower is better)
Translates to: MSWHEYLCHMAPHASLKQVETGS*INSRQM
Trigger: CATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCAC...CTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCAGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CAA 90 bp CTCACAGTTCCAAGGTTAGAGAGTTGGACACTGAGACTGGTTTCCTGCAAGGAAAGACGTCTTTTGAGGTaGTATCCGCTGCTTTGTCCT +
Preference number: 5 (lower is better)
Translates to: LTVPRLESWTLRLVSCKERRLLR*YPLLCP
Trigger: AGGACAAAGCAGCGGATACAACCTCAAAAGACGTCT...TTCCTTGCAGGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CAA 90 bp TTCTGTGCTGGGAGTCCGCCTATCATTACATGTTTCCTTACTTCCAGCCCATCTGTAGACAGACGTCTTTaGAGGTTGTATCCGCTGCTT +
Preference number: 5 (lower is better)
Translates to: FCAGSPPIITCFLTSSPSVDRRL*RLYPLL
Trigger: AAGCAGCGGATACAACCTCAAAAGACGTCTGTCTAC...AGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CAA 90 bp CCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTGCTCCACATGCAAGTTaGAAACAGAACTACCCTGAT +
Preference number: 5 (lower is better)
Translates to: PLLCPQSSHSSKVRELDTAPHAS*KQNYPD
Trigger: ATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGC...AGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGGCTTGTTACTCTTCTaGGCTCCAGTTGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAGLLLF*APVAGS
Trigger: AGAACCTGCAACTGGAGCCAAGAAGAGTAACAAGCC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CAA 90 bp AAGCCATTGTCCTCTGTCCAGGCATCTGGCTGCACAACCACAATTGGGTGGACAAACCTAGAGCCTCCTTaGATACTACATTTGGCATTA +
Preference number: 5 (lower is better)
Translates to: KPLSSVQASGCTTTIGWTNLEPP*ILHLAL
Trigger: TAATGCCAAATGTAGTATCAAAGGAGGCTCTAGGTT...TGTCCACCCAATTGTGGTTGTGCAGCCAGATGCCTGGACAGAGGACAATGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCGTTCCTGAGATGCCTTaGCCAATATTACCTGGTTAC +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSVPEMP*PILPGY
Trigger: GTAACCAGGTAATATTGGCAAAGGCATCTCAGGAAC...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTTTATCAGGTTATGTaGCATGGTATCCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLYQVM*HGIPLL
Trigger: CAGCAGAGGGATACCATGCAACATAACCTGATAAAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp TTACTTCCAGCCCATCTGTTATGTTGGCTCCTTGCTAAGCCAGGCTGTTTGCTTGTTGAAGATGGTATGTaGCCAACACGAGCTGACTCT +
Preference number: 5 (lower is better)
Translates to: LLPAHLLCWLLAKPGCLLVEDGM*PTRADS
Trigger: AGAGTCAGCTCGTGTTGGCAACATACCATCTTCAAC...AAGCAAACAGCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGCTGGAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTGCTCGCTTTGGACCTaGGTGGTTTCTTCCATTGAC +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCACSLWT*VVSSID
Trigger: GTCAATGGAAGAAACCACCAAGGTCCAAAGCGAGCA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCATTGCATGGAAGCCATaGTCCTCTGTCCAGGCATCT +
Preference number: 5 (lower is better)
Translates to: RKDFRVHSVEVFWHGFCSIAWKP*SSVQAS
Trigger: AGATGCCTGGACAGAGGACAATGGCTTCCATGCAAT...GCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTATTGCATGGAAGCCATaGTCCTCTGTCCAGGCATCT +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAIAWKP*SSVQAS
Trigger: AGATGCCTGGACAGAGGACAATGGCTTCCATGCAAT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCACACATCTGCCCAATaGCATGGAAGCCATTGTCCT +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAHTSAQ*HGSHCP
Trigger: AGGACAATGGCTTCCATGCAATTGGGCAGATGTGTG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGGCCCTTTCTTCTGGTaGAGAAGTTTCAGCATGCAA +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAGPFFW*RSFSMQ
Trigger: TTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGCC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp TTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTCCAAGGTTAGAGAGTaGGACACTGAGACTGGTTTC +
Preference number: 5 (lower is better)
Translates to: FPARKDFRVHSVEVFWHGSKVRE*DTETGF
Trigger: GAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGA...ACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461798.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTAGACGTCTTTTGAGGTaGTATCCGCTGCTTTGTCCT +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCARRLLR*YPLLCP
Trigger: AGGACAAAGCAGCGGATACAACCTCAAAAGACGTCT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp TTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTAGACGTCTTTTGAGGTaGTATCCGCTGCTTTGTCCT +
Preference number: 5 (lower is better)
Translates to: FPARKDFRVHSVEVFWHGRRLLR*YPLLCP
Trigger: AGGACAAAGCAGCGGATACAACCTCAAAAGACGTCT...ACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGTAGACAGACGTCTTTaGAGGTTGTATCCGCTGCTT +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAVDRRL*RLYPLL
Trigger: AAGCAGCGGATACAACCTCAAAAGACGTCTGTCTAC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp CTTTTGAGGTTGTATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTTTAAGTTGGGGAGGCTaGCCTTCTTCCGATAGGTTT +
Preference number: 5 (lower is better)
Translates to: LLRLYPLLCPQSSHSSKVLSWGG*PSSDRF
Trigger: AAACCTATCGGAAGAAGGCAAGCCTCCCCAACTTAA...AACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp TTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCCATACTTTTGTGAGGGGACGCTCTaGTATTATCTGTGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: FRVHSVEVFWHGFCSPYFCEGTL*YYLWLS
Trigger: ACTGAGCCACAGATAATACAAGAGCGTCCCCTCACA...AAAGTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCTTCTTGGCTCCAGTaGCAGGTTCTTTACCTTCCA +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCASSWLQ*QVLYLP
Trigger: TGGAAGGTAAAGAACCTGCAACTGGAGCCAAGAAGA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CAA 90 bp TTACTTCCAGCCCATCTGTTATGTTGGCTCCTTGCTAAGCCAGGCTGTTTGCTTAAGAACCAGGTGCATTaGTTAACTTCAGCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LLPAHLLCWLLAKPGCLLKNQVH*LTSALG
Trigger: TCCCAGAGCTGAAGTTAACAAATGCACCTGGTTCTT...AAGCAAACAGCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGCTGGAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTTGTGCTCACTGTACTaGGAATGTTCTCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLCSLY*ECSHFP
Trigger: TGGGAAATGAGAACATTCCAAGTACAGTGAGCACAA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CAA 90 bp CCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACACTCCTTTCTGGACGCTTTaGCTAAAAACAGCAGAACTT +
Preference number: 5 (lower is better)
Translates to: PLLCPQSSHSSKVRELDTPFWTL*LKTAEL
Trigger: AAGTTCTGCTGTTTTTAGCAAAAGCGTCCAGAAAGG...AGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCCTGGGTGTTTGTATTaGCAGTCAAGTCTTCCAATT +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSPGCLY*QSSLPI
Trigger: AATTGGAAGACTTGACTGCAAATACAAACACCCAGG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAAGGATCCTGGGTGTTaGTATTTGCAGTCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSKDPGC*YLQSSL
Trigger: AAGACTTGACTGCAAATACAAACACCCAGGATCCTT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTGCTTCACCTAAGTTaGAATCCATGCTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLLHLS*NPCFAL
Trigger: AAGAGCAAAGCATGGATTCAAACTTAGGTGAAGCAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCCTCTAGATCTTGCCTaGGCAAGTAAGATGTTTCCG +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAPLDLA*ASKMFP
Trigger: CGGAAACATCTTACTTGCCAAGGCAAGATCTAGAGG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTGTTGAAGATGGTATGTaGCCAACACGAGCTGACTCT +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAVEDGM*PTRADS
Trigger: AGAGTCAGCTCGTGTTGGCAACATACCATCTTCAAC...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp TGGCATGAGTATTTGTGCCACATGGCTCCACATGCAAGTTTGAAACAGAACTACTGCTCGCTTTGGACCTaGGTGGTTTCTTCCATTGAC +
Preference number: 5 (lower is better)
Translates to: WHEYLCHMAPHASLKQNYCSLWT*VVSSID
Trigger: GTCAATGGAAGAAACCACCAAGGTCCAAAGCGAGCA...GTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTATTCTCTTGCTCGCTTaGGACCTTGGTGGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAILLLA*DLGGFF
Trigger: GAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAAT...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTACCATCCATTCCAGTaGATCTGTGGGCATGTTGGT +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCAYHPFQ*ICGHVG
Trigger: ACCAACATGCCCACAGATCAACTGGAATGGATGGTA...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGGCTGCACAACCACAATaGGGTGGACACCTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: FENCPRTILTLSHIIDPKAAQPQ*GGHLCQ
Trigger: TTGGCACAGGTGTCCACCCAATTGTGGTTGTGCAGC...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTGGGGTTTCACCATGTaGGCCAGGCTGGTTTCGAAC +
Preference number: 5 (lower is better)
Translates to: FENCPRTILTLSHIIDPKWGFTM*ARLVSN
Trigger: GTTCGAAACCAGCCTGGCCAACATGGTGAAACCCCA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTGCCGTGGTATGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: FENCPRTILTLSHIIDPKCRGMI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCATACCACGGCA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTGCCGTGGTATGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: TFENCPRTILTLSHIIDPCRGMI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCATACCACGGCA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp GCTCCACATGCAAGTTTGAAACAGAACTACCCTGATACTTTTCTGGATGCCTCTGGCCCTTTCTTCTGGTaGAGAAGTTTCAGCATGCAA +
Preference number: 5 (lower is better)
Translates to: APHASLKQNYPDTFLDASGPFFW*RSFSMQ
Trigger: TTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGCC...AGAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTCTGTAGCCCATACTTaGGATGATAGAAACTTCATC +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSSVAHT*DDRNFI
Trigger: GATGAAGTTTCTATCATCCAAAGTATGGGCTACAGA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp CATGCTGTTCTAACACAGCTTCTAGTTCAGCCATTTCCTGCTGGAGCTTTATCATCCAAGGTTAGAGAGTaGGACACTGAGACTGGTTTC +
Preference number: 5 (lower is better)
Translates to: HAVLTQLLVQPFPAGALSSKVRE*DTETGF
Trigger: GAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGA...TGATAAAGCTCCAGCAGGAAATGGCTGAACTAGAAGCTGTGTTAGAACAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp TTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCCATACTTTGTAGACAGACGTCTTTaGAGGTTGTATCCGCTGCTT +
Preference number: 5 (lower is better)
Translates to: FRVHSVEVFWHGFCSPYFVDRRL*RLYPLL
Trigger: AAGCAGCGGATACAACCTCAAAAGACGTCTGTCTAC...AAAGTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CAA 90 bp ATAAACTGCTGTTCTCATGCTGTAATGAGCTGGCATGAGTATTTGTGCCACATGGTTACATGGCTTAAGTaGGGGAGGCTTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: INCCSHAVMSWHEYLCHMVTWLK*GRLAFF
Trigger: GAAGAAGGCAAGCCTCCCCAACTTAAGCCATGTAAC...CATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCATTTCAGGAGTCTTTaGAACTGCCAAATCTGCTTT +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSHFRSL*NCQICF
Trigger: AAAGCAGATTTGGCAGTTCAAAAGACTCCTGAAATG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAGTAATATTCATCACTaGACCATTCTGCTCCGTTTG +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSSNIHH*TILLRL
Trigger: CAAACGGAGCAGAATGGTCAAGTGATGAATATTACT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTGGCGCTTTGAAACCTaGAATGTATTCTGCAAATAC +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSWRFET*NVFCKY
Trigger: GTATTTGCAGAATACATTCAAGGTTTCAAAGCGCCA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CAA 90 bp CTTTTCTGGATGCCTCTCAGCTGCACGCTTCTCAGTGGTGTTCAAATCATTATTAGTGGGCAGAGAATGTaGCACATTCCTCTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: LFWMPLSCTLLSGVQIIISGQRM*HIPLLH
Trigger: ATGCAGAAGAGGAATGTGCAACATTCTCTGCCCACT...AATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCAACCTAGAGCCTCCTTaGATACTACATTTGGCATTA +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSNLEPP*ILHLAL
Trigger: TAATGCCAAATGTAGTATCAAAGGAGGCTCTAGGTT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357654.9
ENST00000471181.7
CDS-3UTR CAA 90 bp GATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCACGGTTTCTGTAGCCCATACGTTCCTGAGATGCCTTaGCCAATATTACCTGGTTAC +
Preference number: 5 (lower is better)
Translates to: DFRVHSVEVFWHGFCSPYVPEMP*PILPGY
Trigger: GTAACCAGGTAATATTGGCAAAGGCATCTCAGGAAC...GTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp TTCTGTGCTGGGAGTCCGCCTATCATTACATGTTTCCTTACTTCCAGCCCATCTCTGCTTCACCTAAGTTaGAATCCATGCTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: FCAGSPPIITCFLTSSPSLLHLS*NPCFAL
Trigger: AAGAGCAAAGCATGGATTCAAACTTAGGTGAAGCAG...AGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp AGAAGTAAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTCTTTATCAGGTTATGTaGCATGGTATCCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: RSKLRETSYSLEAKPLCALYQVM*HGIPLL
Trigger: CAGCAGAGGGATACCATGCAACATAACCTGATAAAG...AGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCTTAATGAGCTCCTCTaGAGATGGGTAGTTTCTATT +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSLNELL*RWVVSI
Trigger: AATAGAAACTACCCATCTCAAGAGGAGCTCATTAAG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTTCTGCAACTTTCAATaGGGGAACTTTCAATGCAGA +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSFCNFQ*GNFQCR
Trigger: TCTGCATTGAAAGTTCCCCAATTGAAAGTTGCAGAA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCTCACACTTTCTTCCATaGCATTATACCCAGCAGTAT +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSSHFLP*HYTQQY
Trigger: ATACTGCTGGGTATAATGCAATGGAAGAAAGTGTGA...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCATGGACATTCTTTTGTaGACCCTTTCTGTTGAAGCT +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSMDILL*TLSVEA
Trigger: AGCTTCAACAGAAAGGGTCAACAAAAGAATGTCCAT...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp TTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCAAGTGTCCTGGGATTCTCTaGCTCGCTTTGGACCTTGGT +
Preference number: 5 (lower is better)
Translates to: FENCPRTILTLSHIIDPKCPGIL*LALDLG
Trigger: ACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACA...CTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCTGTCCTGGGATTCTCTaGCTCGCTTTGGACCTTGGT +
Preference number: 5 (lower is better)
Translates to: TFENCPRTILTLSHIIDPCPGIL*LALDLG
Trigger: ACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACA...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATGCTGCACAACCACAATaGGGTGGACACCTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: PTFENCPRTILTLSHIIDAAQPQ*GGHLCQ
Trigger: TTGGCACAGGTGTCCACCCAATTGTGGTTGTGCAGC...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000471181.7
ENST00000644379.1
CDS-3UTR CAA 90 bp AGATCCCAATTCAATGTAGACAGACGTCTTTTGAGGTTGTATCCGCTGCTTTGTCACACATCTGCCCAATaGCATGGAAGCCATTGTCCT +
Preference number: 5 (lower is better)
Translates to: RSQFNVDRRLLRLYPLLCHTSAQ*HGSHCP
Trigger: AGGACAATGGCTTCCATGCAATTGGGCAGATGTGTG...ACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAATTGGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461221.5
CDS-3UTR CAA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTGGGGTTTCACCATGTaGGCCAGGCTGGTTTCGAAC +
Preference number: 5 (lower is better)
Translates to: PTFENCPRTILTLSHIIDWGFTM*ARLVSN
Trigger: GTTCGAAACCAGCCTGGCCAACATGGTGAAACCCCA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp CCAACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATTGCCGTGGTATGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: PTFENCPRTILTLSHIIDCRGMI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCATACCACGGCA...ATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp CTGAGACTGGTTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTAGAGGGAGACACTGTTaGCAAAATATGTGGTCACAC +
Preference number: 5 (lower is better)
Translates to: LRLVSCKEGFSGSLCRSLRGRHC*QNMWSH
Trigger: GTGTGACCACATATTTTGCAAACAGTGTCTCCCTCT...AAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642945.1
CDS-3UTR CAA 90 bp ACATTTGAGAACTGCCCAAGGACTATTCTGACTTTAAGTCACATAATCGATCCCGTGGAGACAGGTTCCTaGATCAACTCCAGACAGATG +
Preference number: 5 (lower is better)
Translates to: TFENCPRTILTLSHIIDPVETGS*INSRQM
Trigger: CATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCAC...GGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp AGATCCCAATTCAATGTAGACAGACGTCTTTTGAGGTTGTATCCGCTGCTTTGTGGCCCTTTCTTCTGGTaGAGAAGTTTCAGCATGCAA +
Preference number: 5 (lower is better)
Translates to: RSQFNVDRRLLRLYPLLCGPFFW*RSFSMQ
Trigger: TTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGCC...ACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAATTGGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CAA 90 bp AAACTTAGGGAAACCAGCTATTCTCTTGAGGCCAAGCCACTCTGTGCTTCCAGCCAAAATTATAGCTGTTaGCATACTCCAAACCTGTGT +
Preference number: 5 (lower is better)
Translates to: KLRETSYSLEAKPLCASSQNYSC*HTPNLC
Trigger: ACACAGGTTTGGAGTATGCAAACAGCTATAATTTTG...GCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352993.7
ENST00000357654.9
ENST00000468300.5
ENST00000471181.7
CDS-3UTR CAA 90 bp ATCCGCTGCTTTGTCCTCAGAGTTCTCACAGTTCCAAGGTTAGAGAGTTGGACATCTGTAGCCCATACTTaGGATGATAGAAACTTCATC +
Preference number: 5 (lower is better)
Translates to: IRCFVLRVLTVPRLESWTSVAHT*DDRNFI
Trigger: GATGAAGTTTCTATCATCCAAAGTATGGGCTACAGA...TGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461221.5
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CAA 90 bp AGACTGGTTTCCTGCAAGGAAGGATTTTCGGGTTCACTCTGTAGAAGTCTTTTGGCTCCACATGCAAGTTaGAAACAGAACTACCCTGAT +
Preference number: 5 (lower is better)
Translates to: RLVSCKEGFSGSLCRSLLAPHAS*KQNYPD
Trigger: ATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGC...CAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAACCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492859.5
ENST00000642945.1
CDS-3UTR CAA 90 bp TCTGCAACTTTCAATTGGGGAACTTTCAATGCAGAGGTTGAAGATGGTATGTTGAGCTGGCATGAGTATTaGTGCCACATGGCTCCACAT +
Preference number: 5 (lower is better)
Translates to: SATFNWGTFNAEVEDGMLSWHEY*CHMAPH
Trigger: ATGTGGAGCCATGTGG