RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRAF (Homo sapiens)

Ensembl gene IDs: ENSG00000157764

Ensembl transcript IDs: ENST00000288602.11, ENST00000469930.2, ENST00000496384.7, ENST00000642272.1, ENST00000642875.1, ENST00000644120.1, ENST00000644650.1, ENST00000644905.1, ENST00000644969.2, ENST00000645443.1, ENST00000646427.1, ENST00000646730.1, ENST00000646891.1

Found 622 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCAAGCAGCTGGCGGGTGGATGTACAGTGGGGACAGGTGAGATCTaGGGAGGATGTGCAGCAGCTCGCACTCCGCCTGGTGAATACAAG +
Preference number: 1 (lower is better)
Translates to: CKQLAGGCTVGTGEI*GGCAAARTPPGEYK
Trigger: CTTGTATTCACCAGGCGGAGTGCGAGCTGCTGCACATCCTCCTCAGATCTCACCTGTCCCCACTGTACATCCACCCGCCAGCTGCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 90 bp GCCTTGAGACCTCCACCCTGGCCCCCACAGCGCTTTGGGACAGGATaGCTAACGCAGTCCAGCTTCATGTGCAATCAAGTCCCGGGAAGA +
Preference number: 1 (lower is better)
Translates to: ALRPPPWPPQRFGTG*LTQSSFMCNQVPGR
Trigger: TCTTCCCGGGACTTGATTGCACATGAAGCTGGACTGCGTTAGTCATCCTGTCCCAAAGCGCTGTGGGGGCCAGGGTGGAGGTCTCAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 90 bp AGTCCCGGACCCAGGCTGCACATGTTCTACCTCCTCAGCAGGACATaGAACACATCCTCTTGTTCAAGCCCAGGTCTCTCTACCTGCGGA +
Preference number: 1 (lower is better)
Translates to: SPGPRLHMFYLLSRT*NTSSCSSPGLSTCG
Trigger: TCCGCAGGTAGAGAGACCTGGGCTTGAACAAGAGGATGTGTTTCATGTCCTGCTGAGGAGGTAGAACATGTGCAGCCTGGGTCCGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 90 bp CAACTCTCCCGCATATGTGCTGTACATGAGAACCAGCGGTCACGGTaGTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGT +
Preference number: 1 (lower is better)
Translates to: QLSRICAVHENQRSR*WRMNSAGREKQMVC
Trigger: ACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCACCGTGACCGCTGGTTCTCATGTACAGCACATATGCGGGAGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CCA 90 bp CTCTCCCGCATATGTGCTGTACATGAGAACCAGCGGTCACGGTGCTaGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACA +
Preference number: 1 (lower is better)
Translates to: LSRICAVHENQRSRC*RMNSAGREKQMVCT
Trigger: TGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCACCGTGACCGCTGGTTCTCATGTACAGCACATATGCGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 90 bp CTCTTCACAAATTTTCTGCCAACTCTCCCGCATATGTGCTGTACATaGGAACCAGCGGTCACGGTGCTGGAGAATGAACTCGGCTGGCCG +
Preference number: 1 (lower is better)
Translates to: LFTNFLPTLPHMCCT*EPAVTVLENELGWP
Trigger: CGGCCAGCCGAGTTCATTCTCCAGCACCGTGACCGCTGGTTCTCATGTACAGCACATATGCGGGAGAGTTGGCAGAAAATTTGTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 90 bp CTGAACCCTGCAATGTGGTTTCGAACTAAAGCTAGAGATGAGGTTTaGAAGCAGCTGGCGGGTGGATGTACAGTGGGGACAGGTGAGATC +
Preference number: 1 (lower is better)
Translates to: LNPAMWFRTKARDEV*KQLAGGCTVGTGEI
Trigger: GATCTCACCTGTCCCCACTGTACATCCACCCGCCAGCTGCTTGCAAACCTCATCTCTAGCTTTAGTTCGAAACCACATTGCAGGGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CCA 90 bp GCTAGCAACATGGACCACAGATATACTGGTGACTCCGCTCTCCTCTaGCCAAGCTACAAATCATCACCTGAGGCAGAGATGCTACTACCC +
Preference number: 1 (lower is better)
Translates to: ASNMDHRYTGDSALL*PSYKSSPEAEMLLP
Trigger: GGGTAGTAGCATCTCTGCCTCAGGTGATGATTTGTAGCTTGGCCAGAGGAGAGCGGAGTCACCAGTATATCTGTGGTCCATGTTGCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 90 bp GCATATGTGCTGTACATGAGAACCAGCGGTCACGGTGCTGGAGAATaGACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATTT +
Preference number: 1 (lower is better)
Translates to: AYVLYMRTSGHGAGE*TRLAGRSRWFVQTF
Trigger: AAATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCACCGTGACCGCTGGTTCTCATGTACAGCACATATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 90 bp CCCGTCAACAGACCCTTCCTTTGCGGCATCTCTTCACAAATTTTCTaGCAACTCTCCCGCATATGTGCTGTACATGAGAACCAGCGGTCA +
Preference number: 1 (lower is better)
Translates to: PVNRPFLCGISSQIF*QLSRICAVHENQRS
Trigger: TGACCGCTGGTTCTCATGTACAGCACATATGCGGGAGAGTTGGCAGAAAATTTGTGAAGAGATGCCGCAAAGGAAGGGTCTGTTGACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CCA 90 bp CAATGTGGTTTCGAACTAAAGCTAGAGATGAGGTTTGCAAGCAGCTaGCGGGTGGATGTACAGTGGGGACAGGTGAGATCTGAGGAGGAT +
Preference number: 1 (lower is better)
Translates to: QCGFELKLEMRFASS*RVDVQWGQVRSEED
Trigger: ATCCTCCTCAGATCTCACCTGTCCCCACTGTACATCCACCCGCCAGCTGCTTGCAAACCTCATCTCTAGCTTTAGTTCGAAACCACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 90 bp TTTCACTGGGCACGCCCCAGACTCCACGAGAACCTTTTCAATGCTTaGGTGGAACTGAAGTGTACTAAACCCGAACCTTTGGCAGTAACA +
Preference number: 1 (lower is better)
Translates to: FHWARPRLHENLFNA*VELKCTKPEPLAVT
Trigger: TGTTACTGCCAAAGGTTCGGGTTTAGTACACTTCAGTTCCACTCAAGCATTGAAAAGGTTCTCGTGGAGTCTGGGGCGTGCCCAGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CCA 90 bp CTGAGGCAGAGATGCTACTACCCTCTTCTGGGGCTCAACTACCGATaGGCATCAGTAATCCATCCCAGTATAACATTTCAAGGATGTGCT +
Preference number: 1 (lower is better)
Translates to: LRQRCYYPLLGLNYR*ASVIHPSITFQGCA
Trigger: AGCACATCCTTGAAATGTTATACTGGGATGGATTACTGATGCCCATCGGTAGTTGAGCCCCAGAAGAGGGTAGTAGCATCTCTGCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 90 bp AAAGGTTCATCAGACTTTAGGCAGCAAGATGAGTCTCTCCTTGGGTaGCCACCTGGACTGGTAGGTATGATAGTGGTGACAGTGCCAAAT +
Preference number: 1 (lower is better)
Translates to: KGSSDFRQQDESLLG*PPGLVGMIVVTVPN
Trigger: ATTTGGCACTGTCACCACTATCATACCTACCAGTCCAGGTGGTCACCCAAGGAGAGACTCATCTTGCTGCCTAAAGTCTGATGAACCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR CCA 90 bp AGATACAAGAACCACAGCATGGAATATGTTTTCTTTTACATCCAATaGCCAGGTCATAAAGGATGCCTTGAGACCTCCACCCTGGCCCCC +
Preference number: 1 (lower is better)
Translates to: RYKNHSMEYVFFYIQ*PGHKGCLETSTLAP
Trigger: GGGGGCCAGGGTGGAGGTCTCAAGGCATCCTTTATGACCTGGCCATTGGATGTAAAAGAAAACATATTCCATGCTGTGGTTCTTGTATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 90 bp CCTTCCATCTCTGGCTATGGTGTTTATAGCCTAATGGTTGGAATCTaGTCGTCTCAAGGTGCTGGTATTCCTAGCACTAACAATGCCAAC +
Preference number: 1 (lower is better)
Translates to: PSISGYGVYSLMVGI*SSQGAGIPSTNNAN
Trigger: GTTGGCATTGTTAGTGCTAGGAATACCAGCACCTTGAGACGAGCAGATTCCAACCATTAGGCTATAAACACCATAGCCAGAGATGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 90 bp GGTGACAGTGCCAAATTACAGCCTTCCTTATACTTTGATGCCCTCTaGTCCCTTATTACAACCAAGCTGCCTGGAGGCTTTAAGCATACA +
Preference number: 1 (lower is better)
Translates to: GDSAKLQPSLYFDAL*SLITTKLPGGFKHT
Trigger: TGTATGCTTAAAGCCTCCAGGCAGCTTGGTTGTAATAAGGGAGCAGAGGGCATCAAAGTATAAGGAAGGCTGTAATTTGGCACTGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR TCA 90 bp AAAAATCTCAATATGCTAAGCCTGGCTCCTGGGCACAGCTTCATTTaGGATCAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATT +
Preference number: 1 (lower is better)
Translates to: KNLNMLSLAPGHSFI*DQVCSPVQMRYQPI
Trigger: AATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTGATCTCAAATGAAGCTGTGCCCAGGAGCCAGGCTTAGCATATTGAGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 90 bp TCCATAGCAAATCTCCCAAGCTGTAGCAGCAGTTTCTTTCCATCATaGCTGACCATCAAAAGGTCAGAATTCAGGGTCTCTCCTCTTTCT +
Preference number: 1 (lower is better)
Translates to: SIANLPSCSSSFFPS*LTIKRSEFRVSPLS
Trigger: AGAAAGAGGAGAGACCCTGAATTCTGACCTTTTGATGGTCAGGCATGATGGAAAGAAACTGCTGCTACAGCTTGGGAGATTTGCTATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 90 bp TATCCTTCTGTTGGTCACACATTCCTCTCATGGAGAGTAAGCCCTTaGCACATCATTTATTATACTCCCATGGAGGACAAAGCACCTGGT +
Preference number: 1 (lower is better)
Translates to: YPSVGHTFLSWRVSP*HIIYYTPMEDKAPG
Trigger: ACCAGGTGCTTTGTCCTCCATGGGAGTATAATAAATGATGTGGCAAGGGCTTACTCTCCATGAGAGGAATGTGTGACCAACAGAAGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR CCA 90 bp CTGACCATCAAAAGGTCAGAATTCAGGGTCTCTCCTCTTTCTTCCTaGGACTGGGCAGACTTGTATGCTCGTGGTATTTTTGTTGAAGAA +
Preference number: 1 (lower is better)
Translates to: LTIKRSEFRVSPLSS*DWADLYARGIFVEE
Trigger: TTCTTCAACAAAAATACCACGAGCATACAAGTCTGCCCAGTCCCAGGAAGAAAGAGGAGAGACCCTGAATTCTGACCTTTTGATGGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CCA 90 bp GCAGTAACAGAAAAGAGGAATGTGTGTGTGAGTCGCCATAAGGTTTaGAGTGGTGAAACAGGAACCGTGAATTCACTGCAGTTCAAACAG +
Preference number: 1 (lower is better)
Translates to: AVTEKRNVCVSRHKV*SGETGTVNSLQFKQ
Trigger: CTGTTTGAACTGCAGTGAATTCACGGTTCCTGTTTCACCACTCCAAACCTTATGGCGACTCACACACACATTCCTCTTTTCTGTTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 90 bp CTTCCTTATACTTTGATGCCCTCTGCTCCCTTATTACAACCAAGCTaGCTGGAGGCTTTAAGCATACAGATGGGCTTGCTATTTTTGAAC +
Preference number: 1 (lower is better)
Translates to: LPYTLMPSAPLLQPS*LEALSIQMGLLFLN
Trigger: GTTCAAAAATAGCAAGCCCATCTGTATGCTTAAAGCCTCCAGGCAGCTTGGTTGTAATAAGGGAGCAGAGGGCATCAAAGTATAAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR CCA 90 bp ACAAACATCTTACCAGTATTTTTAATTTTACCAGAGCTAGCAACATaGACCACAGATATACTGGTGACTCCGCTCTCCTCTGGCCAAGCT +
Preference number: 1 (lower is better)
Translates to: TNILPVFLILPELAT*TTDILVTPLSSGQA
Trigger: AGCTTGGCCAGAGGAGAGCGGAGTCACCAGTATATCTGTGGTCCATGTTGCTAGCTCTGGTAAAATTAAAAATACTGGTAAGATGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 90 bp ATCTGTGCCTACTCTGTGAGCTTTGTTGTTTATGCTAGTTTGCAGTaGCTTCCAACTCATACTCCACCAAAACACACGTGGGTTCAAAAA +
Preference number: 1 (lower is better)
Translates to: ICAYSVSFVVYASLQ*LPTHTPPKHTWVQK
Trigger: TTTTTGAACCCACGTGTGTTTTGGTGGAGTATGAGTTGGAAGTCACTGCAAACTAGCATAAACAACAAAGCTCACAGAGTAGGCACAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 90 bp AGCCACTTTACAGACAAGACTGTTACACCCTTACAAGATGATCAGTaGCGCAGCCACATACTGTCTATACAATTACTCATAAAGTGCTTT +
Preference number: 1 (lower is better)
Translates to: SHFTDKTVTPLQDDQ*RSHILSIQLLIKCF
Trigger: AAAGCACTTTATGAGTAATTGTATAGACAGTATGTGGCTGCGTCACTGATCATCTTGTAAGGGTGTAACAGTCTTGTCTGTAAAGTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 90 bp TGTCAAGGTATTTTTCTAGAGCCTCACCTACACCATTTCAACTCATaGCCTGTAAGCTATTTGCTGTTCATACTCACAGTAAACCTTCCA +
Preference number: 1 (lower is better)
Translates to: CQGIFLEPHLHHFNS*PVSYLLFILTVNLP
Trigger: TGGAAGGTTTACTGTGAGTATGAACAGCAAATAGCTTACAGGTCATGAGTTGAAATGGTGTAGGTGAGGCTCTAGAAAAATACCTTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 90 bp TCTATGAATGCCTGTGCATGTGACAAAGCTGCAGCAAACTCATTATaGGGATGTACTGTCATGCCAAGCCTACTGAAAATTAAAATTACA +
Preference number: 1 (lower is better)
Translates to: SMNACACDKAAANSL*GCTVMPSLLKIKIT
Trigger: TGTAATTTTAATTTTCAGTAGGCTTGGCATGACAGTACATCCTCATAATGAGTTTGCTGCAGCTTTGTCACATGCACAGGCATTCATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 90 bp AAGTCCATCAGGAATACTACACAGTTACAAACAATCCTCTGTAGTTaGTCTCAAATTTTTCAGAAGGCTTCACCTCTCCCTACCAAAAAT +
Preference number: 1 (lower is better)
Translates to: KSIRNTTQLQTILCS*SQIFQKASPLPTKN
Trigger: ATTTTTGGTAGGGAGAGGTGAAGCCTTCTGAAAAATTTGAGAGCAACTACAGAGGATTGTTTGTAACTGTGTAGTATTCCTGATGGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 90 bp CGGTCCTATATTTCAATTTCCCCTTCTAAGTTAATACATGATTGCTaGCCATCATACAGTACTTCAACCCTAAACTACAGCAATTTCTGT +
Preference number: 1 (lower is better)
Translates to: RSYISISPSKLIHDC*PSYSTSTLNYSNFC
Trigger: ACAGAAATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAACTTAGAAGGGGAAATTGAAATATAGGACCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 90 bp TTTAATTTCTTTCAAGTCCTTGGCTATAGCTTGGTTGGTCTGATTTaGTTTGTGTTCCTAAATTCTGAGTCTAGATTCCTGATAAGGGAG +
Preference number: 1 (lower is better)
Translates to: FNFFQVLGYSLVGLI*FVFLNSESRFLIRE
Trigger: CTCCCTTATCAGGAATCTAGACTCAGAATTTAGGAACACAAATCAAATCAGACCAACCAAGCTATAGCCAAGGACTTGAAAGAAATTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 90 bp ATTCGGTCCTATATTTCAATTTCCCCTTCTAAGTTAATACATGATTaGTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATTTC +
Preference number: 1 (lower is better)
Translates to: IRSYISISPSKLIHD*CPSYSTSTLNYSNF
Trigger: GAAATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAACTTAGAAGGGGAAATTGAAATATAGGACCGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTCTGGTCTCAAACTCCTaGGCTCACGCGATCTGCCCA +
Preference number: 2 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPLVSNS*AHAICP
Trigger: TGGGCAGATCGCGTGAGCCCAGGAGTTTGAGACCAG...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
3UTR-3UTR TCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTGGGAGAGATTGGGTGTaGAGGGAGCAATGCGTTTGC +
Preference number: 2 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPGRDWV*REQCVC
Trigger: GCAAACGCATTGCTCCCTTCACACCCAATCTCTCCC...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
3UTR-3UTR CCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTGTGAGCCACTACGCCTaGCCCAGGCAGTTTCAAAAG +
Preference number: 2 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPVSHYA*PRQFQK
Trigger: CTTTTGAAACTGCCTGGGCCAGGCGTAGTGGCTCAC...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646891.1
3UTR-3UTR GCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTCCCAGGCTAACCGACTaGCAACTTCTCACCTGCAAA +
Preference number: 2 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPPRLTD*QLLTCK
Trigger: TTTGCAGGTGAGAAGTTGGCAGTCGGTTAGCCTGGG...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
3UTR-3UTR TCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTCTTAAGCTACCCAAATaGGGGGTTAAAGATTTGCCG +
Preference number: 2 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPLKLPK*GVKDLP
Trigger: CGGCAAATCTTTAACCCCTCATTTGGGTAGCTTAAG...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646891.1
3UTR-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCACGGTGCTGGAGAATaGACTCGGCTGGCCGGGAGA +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPHGAGE*TRLAGR
Trigger: TCTCCCGGCCAGCCGAGTTCATTCTCCAGCACCGTG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTTACAGAATGGAACAATaGGTTTCTGAGTGGCTCTAC +
Preference number: 2 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPYRMEQ*VSEWLY
Trigger: GTAGAGCCACTCAGAAACTCATTGTTCCATTCTGTA...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
3UTR-3UTR TCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTGTTTGCAACAAAATTTaGCTTCTACATGAGCGAGAC +
Preference number: 2 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPVCNKI*LLHERD
Trigger: GTCTCGCTCATGTAGAAGTCAAATTTTGTTGCAAAC...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646891.1
3UTR-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCGATCTGAGGAGGATGTaGAGCAGCTCGCACTCCGCC +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPDLRRM*SSSHSA
Trigger: GGCGGAGTGCGAGCTGCTGCACATCCTCCTCAGATC...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCAGCGGTCACGGTGCTaGAGAATGAACTCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPQRSRC*RMNSAG
Trigger: GCCAGCCGAGTTCATTCTCCAGCACCGTGACCGCTG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCGTCCCGGACCCAGGCTaGACATGTTCTACCTCCTCA +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPVPDPG*TCSTSS
Trigger: TGAGGAGGTAGAACATGTGCAGCCTGGGTCCGGGAC...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGCTAGAGATGAGGTTTaGAAGCAGCTGGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHARDEV*KQLAGG
Trigger: TCCACCCGCCAGCTGCTTGCAAACCTCATCTCTAGC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTTCAAGGAGGCATTTATaGAGATATGTGTTTACTGGA +
Preference number: 2 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPSRRHL*RYVFTG
Trigger: TCCAGTAAACACATATCTGCATAAATGCCTCCTTGA...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
3UTR-3UTR CCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATCGGGTGGATGTACAGTaGGGACAGGTGAGATCTGAG +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHRVDVQ*GQVRSE
Trigger: CTCAGATCTCACCTGTCCCCACTGTACATCCACCCG...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCGCCCCCACAGCGCTTTaGGACAGGATGACTAACGCA +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPAPTAL*DRMTNA
Trigger: TGCGTTAGTCATCCTGTCCCAAAGCGCTGTGGGGGC...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTAGTTTAGTATCTAAATaGCTGGTATATGCCATCCGA +
Preference number: 2 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPSLVSK*LVYAIR
Trigger: TCGGATGGCATATACCAGCCATTTAGATACTAAACT...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
3UTR-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTACAGTGGGGACAGGTaGGATCTGAGGAGGATGTGC +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPYSGDR*DLRRMC
Trigger: GCACATCCTCCTCAGATCTCACCTGTCCCCACTGTA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTGCCACGGCATTTTGTaGCCTGGACAAAGTAGCCGC +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPCHGIL*PGQSSR
Trigger: GCGGCTACTTTGTCCAGGGCACAAAATGCCGTGGCA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCACCTGAGGCAGAGATaGTACTACCCTCTTCTGGGG +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPHLRQR*YYPLLG
Trigger: CCCCAGAAGAGGGTAGTAGCATCTCTGCCTCAGGTG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAACCAGCGGTCACGGTaGTGGAGAATGAACTCGGCT +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPNQRSR*WRMNSA
Trigger: AGCCGAGTTCATTCTCCAGCACCGTGACCGCTGGTT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAGGTTTGCAAGCAGCTaGCGGGTGGATGTACAGTGG +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPRFASS*RVDVQW
Trigger: CCACTGTACATCCACCCGCCAGCTGCTTGCAAACCT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGAGAACGATGCTTGGTaGTTGAAACTGCCCCATCAG +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHENDAW*LKLPHQ
Trigger: CTGATGGGGCAGTTTCAATCACCAAGCATCGTTCTC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAGTCCCGGACCCAGGCTaGACATGTTCTACCTCCTCA +
Preference number: 2 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGVPDPG*TCSTSS
Trigger: TGAGGAGGTAGAACATGTGCAGCCTGGGTCCGGGAC...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCGCTAAGCCTGGCTCCTaGGCACAGCTTCATTTGAGA +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPAKPGS*AQLHLR
Trigger: TCTCAAATGAAGCTGTGCCCAGGAGCCAGGCTTAGC...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 90 bp GCTGCACATGTTCTACCTCCTCAGCAGGACATGAAACACATCCTCTaGTTCAAGCCCAGGTCTCTCTACCTGCGGAAACTTGAAGCCAAT +
Preference number: 2 (lower is better)
Translates to: AAHVLPPQQDMKHIL*FKPRSLYLRKLEAN
Trigger: ATTGGCTTCAAGTTTCCGCAGGTAGAGAGACCTGGGCTTGAACAAGAGGATGTGTTTCATGTCCTGCTGAGGAGGTAGAACATGTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATTACACCCTTACAAGATaGTCAGTGACGCAGCCACAT +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHYTLTR*SVTQPH
Trigger: ATGTGGCTGCGTCACTGATCATCTTGTAAGGGTGTA...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATAAAGAAGGCAATGTGTaGCAGCACTATCTAGCCTGC +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHKEGNV*QHYLAC
Trigger: GCAGGCTAGATAGTGCTGGCACACATTGCCTTCTTT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCAGTCCAGCTTCATGTaGAATCAAGTCCCGGGAAGA +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPQSSFM*NQVPGR
Trigger: TCTTCCCGGGACTTGATTGCACATGAAGCTGGACTG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATCCCTCAGAAACTAACTaGTGGTCACTAGGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHPSETN*WSLGER
Trigger: TCTTTCCCCTAGTGACCACCAGTTAGTTTCTGAGGG...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACAAGCAGCTGGCGGGTaGATGTACAGTGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLAQAAGG*MYSGDR
Trigger: CCTGTCCCCACTGTACATCCACCCGCCAGCTGCTTG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAAGACAGACCCCTCAGTaGGCAAGGAAACAAAAGGCC +
Preference number: 2 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGRQTPQ*ARKQKA
Trigger: GGCCTTTTGTTTCCTTGCTCACTGAGGGGTCTGTCT...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATTTACAAGATGATCAGTaGCGCAGCCACATACTGTCT +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHLQDDQ*RSHILS
Trigger: AGACAGTATGTGGCTGCGTCACTGATCATCTTGTAA...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp AAGGTTCATCAGACTTTAGGCAGCAAGATGAGTCTCTCCTTGGGTGACCACCTGGCCTTCCTTATACTTTaGTGCCCTCTGCTCCCTTAT +
Preference number: 2 (lower is better)
Translates to: KVHQTLGSKMSLSLGDHLAFLIL*CPLLPY
Trigger: ATAAGGGAGCAGAGGGCATCAAAGTATAAGGAAGGC...CAGGTGGTCACCCAAGGAGAGACTCATCTTGCTGCCTAAAGTCTGATGAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR-3UTR GCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGAAGAAGATGCAGCATaGCCTTTTCCTCCATACCAA +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHEEDAA*PFPPYQ
Trigger: TTGGTATGGAGGAAAAGGGCATGCTGCATCTTCTTC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGTCTGGGAATTCAGCTaGCAAATTGCCCAACCTTTT +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHVWEFS*QIAQPF
Trigger: AAAAGGTTGGGCAATTTGGCAGCTGAATTCCCAGAC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAGTCACTCATTGAGTTaGCGACTAATTGCCCCATGC +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPSHSLS*RLIAPC
Trigger: GCATGGGGCAATTAGTCGGCAACTCAATGAGTGACT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATTCAGAAACTAACTGGTaGTCACTAGGGGAAAGAGCT +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHSETNW*SLGERA
Trigger: AGCTCTTTCCCCTAGTGACCACCAGTTAGTTTCTGA...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCCCCTAAACCGGTTCTaGCACCACTTTCAACAACAT +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPPLNRF*HHFQQH
Trigger: ATGTTGTTGAAAGTGGTGCCAGAACCGGTTTAGGGG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATAATCAGTGTCTAGGTTaGCAGCAGTACTCTGGAAAC +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHNQCLG*QQYSGN
Trigger: GTTTCCAGAGTACTGCTGCCAACCTAGACACTGATT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATTACACTGGCTTACATTaGCTGTGTCCTCATACACAC +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHYTGLH*LCPHTH
Trigger: GTGTGTATGAGGACACAGCCAATGTAAGCCAGTGTA...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 90 bp GGTATGATAGTGGTGACAGTGCCAAATTACAGCCTTCCTTATACTTaGATGCCCTCTGCTCCCTTATTACAACCAAGCTGCCTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: GMIVVTVPNYSLPYT*MPSAPLLQPSCLEA
Trigger: AGCCTCCAGGCAGCTTGGTTGTAATAAGGGAGCAGAGGGCATCAAAGTATAAGGAAGGCTGTAATTTGGCACTGTCACCACTATCATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCGTCTGGGAATTCAGCTaGCAAATTGCCCAACCTTTT +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPVWEFS*QIAQPF
Trigger: AAAAGGTTGGGCAATTTGGCAGCTGAATTCCCAGAC...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATTTAAACCAGAGTGGCTaGTCTCTTCACAAATCACTG +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHLNQSG*SLHKSL
Trigger: CAGTGATTTGTGAAGAGAGCAGCCACTCTGGTTTAA...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATAGCCACAAATTGATCTaGTGGTTAGAAGGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHSHKLI*WLEGQS
Trigger: ACTTTGCCCTTCTAACCACCAGATCAATTTGTGGCT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAAGGTTTGCAAGCAGCTaGCGGGTGGATGTACAGTGG +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLARFASS*RVDVQW
Trigger: CCACTGTACATCCACCCGCCAGCTGCTTGCAAACCT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCACCTCACCCCATTTTaGTCTCTGTTCTCTACATCT +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPHLTPF*SLFSTS
Trigger: AGATGTAGAGAACAGAGACCAAAATGGGGTGAGGTG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 90 bp TCAGATGATCAGCCACAAATTGATCTGGTGGTTAGAAGGGCAAAGTaGACTGGCAGACTTTCCATAGCAAATCTCCCAAGCTGTAGCAGC +
Preference number: 2 (lower is better)
Translates to: SDDQPQIDLVVRRAK*TGRLSIANLPSCSS
Trigger: GCTGCTACAGCTTGGGAGATTTGCTATGGAAAGTCTGCCAGTCAACTTTGCCCTTCTAACCACCAGATCAATTTGTGGCTGATCATCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTCTTTCCATCATGCCTaGCCATCAAAAGGTCAGAAT +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPSFHHA*PSKGQN
Trigger: ATTCTGACCTTTTGATGGTCAGGCATGATGGAAAGA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTGAGAACGATGCTTGGTaGTTGAAACTGCCCCATCAG +
Preference number: 2 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIENDAW*LKLPHQ
Trigger: CTGATGGGGCAGTTTCAATCACCAAGCATCGTTCTC...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAAGACAGACCCCTCAGTaGGCAAGGAAACAAAAGGCC +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLARQTPQ*ARKQKA
Trigger: GGCCTTTTGTTTCCTTGCTCACTGAGGGGTCTGTCT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAAATACAATCAGGGGTaGGATATTCGGGAACCAGAA +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPKYNQG*DIREPE
Trigger: TTCTGGTTCCCGAATATCTCACCCCTGATTGTATTT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTACAAAGTTTCAGGTTaGCAGTGCTGCAGTCTTGAA +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPYKVSG*QCCSLE
Trigger: TTCAAGACTGCAGCACTGTCAACCTGAAACTTTGTA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATCCCTTTAGGACAAAATaGGAGTGCTCAAATACAAGT +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHPFRTK*ECSNTS
Trigger: ACTTGTATTTGAGCACTCTCATTTTGTCCTAAAGGG...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCACCATTTCAACTCATaGCCTGTAAGCTATTTGCTG +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPHHFNS*PVSYLL
Trigger: CAGCAAATAGCTTACAGGTCATGAGTTGAAATGGTG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAAAAGTTCCATGCTTTaGAGAGCCTATGGGAGTAGA +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPKSSML*RAYGSR
Trigger: TCTACTCCCATAGGCTCTTCAAAGCATGGAACTTTT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATAGTTTCTTTCCATCATaGCTGACCATCAAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHSFFPS*LTIKRS
Trigger: TGACCTTTTGATGGTCAGGCATGATGGAAAGAAACT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAAAAGAAGGCAATGTGTaGCAGCACTATCTAGCCTGC +
Preference number: 2 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGKEGNV*QHYLAC
Trigger: GCAGGCTAGATAGTGCTGGCACACATTGCCTTCTTT...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATAACATTTCAAGGATGTaGTGGAGACAATACATGGAC +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHNISRM*WRQYMD
Trigger: GTCCATGTATTGTCTCCAGCACATCCTTGAAATGTT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCTTTCTTCCTGGGACTaGGCAGACTTGTATGCTCGT +
Preference number: 2 (lower is better)
Translates to: TSCDESAVTAPNQKLGNILSSWD*ADLYAR
Trigger: ACGAGCATACAAGTCTGCCCAGTCCCAGGAAGAAAG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCGCTCTATTCTCTGTCTaGGAATTCAGCTGCCAAATT +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPALFSV*EFSCQI
Trigger: AATTTGGCAGCTGAATTCCCAGACAGAGAATAGAGC...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATATAGACAGCAGGGCCTaGAGTTACAATCTGAAATTT +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHIDSRA*SYNLKF
Trigger: AAATTTCAGATTGTAACTCCAGGCCCTGCTGTCTAT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATCAAGCAGCTGGCGGGTaGATGTACAGTGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNQAAGG*MYSGDR
Trigger: CCTGTCCCCACTGTACATCCACCCGCCAGCTGCTTG...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATTGAGACCTCCACCCTaGCCCCCACAGCGCTTTGGG +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKLRPPP*PPQRFG
Trigger: CCCAAAGCGCTGTGGGGGCCAGGGTGGAGGTCTCAA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 90 bp AACACATCCTCTTGTTCAAGCCCAGGTCTCTCTACCTGCGGAAACTaGAAGCCAATCTTGGTAAAGGGAACACAGCCACATTTAAAAGCA +
Preference number: 2 (lower is better)
Translates to: NTSSCSSPGLSTCGN*KPILVKGTQPHLKA
Trigger: TGCTTTTAAATGTGGCTGTGTTCCCTTTACCAAGATTGGCTTCAAGTTTCCGCAGGTAGAGAGACCTGGGCTTGAACAAGAGGATGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 90 bp TTATCCTTCTGTTGGTCACACATTCCTCTCATGGAGAGTAAGCCCTaGCCACATCATTTATTATACTCCCATGGAGGACAAAGCACCTGG +
Preference number: 2 (lower is better)
Translates to: LSFCWSHIPLMESKP*PHHLLYSHGGQSTW
Trigger: CCAGGTGCTTTGTCCTCCATGGGAGTATAATAAATGATGTGGCAAGGGCTTACTCTCCATGAGAGGAATGTGTGACCAACAGAAGGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACGCATAAGTAGTTGGTaGCTGGAAGAGCATAGGAGG +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLARISSW*LEEHRR
Trigger: CCTCCTATGCTCTTCCAGTCACCAACTACTTATGCG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGCGCATAAGTAGTTGGTaGCTGGAAGAGCATAGGAGG +
Preference number: 2 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKRISSW*LEEHRR
Trigger: CCTCCTATGCTCTTCCAGTCACCAACTACTTATGCG...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATGGGACAGGTGAGATCTaGGGAGGATGTGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNGTGEI*GGCAAA
Trigger: AGCTGCTGCACATCCTCCTCAGATCTCACCTGTCCC...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCCCTTTAGGACAAAATaGGAGTGCTCAAATACAAGT +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPPFRTK*ECSNTS
Trigger: ACTTGTATTTGAGCACTCTCATTTTGTCCTAAAGGG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGACAGGAAAGAGAACGATaGTTGGTGATTGAAACTGCC +
Preference number: 2 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGQERER*LVIETA
Trigger: GGCAGTTTCAATCACCAAGCATCGTTCTCTTTCCTG...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAAGGTCAGGAAGAAGATaGAGCATGCCCTTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLARSGRR*SMPFSS
Trigger: GGAGGAAAAGGGCATGCTGCATCTTCTTCCTGACCT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACAGCACTATCTAGCCTaGTTGGTTAGACAGACCCCT +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLAQHYLA*LVRQTP
Trigger: AGGGGTCTGTCTAACCAAGCAGGCTAGATAGTGCTG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGCAGCACTATCTAGCCTaGTTGGTTAGACAGACCCCT +
Preference number: 2 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKQHYLA*LVRQTP
Trigger: AGGGGTCTGTCTAACCAAGCAGGCTAGATAGTGCTG...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAGGTTTAGTTAGATACTaGCACGGCATTTTGTGCCCT +
Preference number: 2 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGGLVRY*HGILCP
Trigger: AGGGCACAAAATGCCGTGGCAGTATCTAACTAAACC...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACCAGGTCTCTCTACCTaGGGAAACTTGAAGCCAATC +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLAPGLST*GNLKPI
Trigger: GATTGGCTTCAAGTTTCCGCAGGTAGAGAGACCTGG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTCTTCACAAATTTTCTaGCAACTCTCCCGCATATGT +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPSSQIF*QLSRIC
Trigger: ACATATGCGGGAGAGTTGGCAGAAAATTTGTGAAGA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCCCTCAGAAACTAACTaGTGGTCACTAGGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIPSETN*WSLGER
Trigger: TCTTTCCCCTAGTGACCACCAGTTAGTTTCTGAGGG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATAAGAAGGAGAATGAATaGAGACGCCACCATTTTTAT +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHKKENE*RRHHFY
Trigger: ATAAAAATGGTGGCGTCTCCATTCATTCTCCTTCTT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTTCTTTTACATCCAATaGCCAGGTCATAAAGGATGC +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPFFYIQ*PGHKGC
Trigger: GCATCCTTTATGACCTGGCCATTGGATGTAAAAGAA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGCATTGCTGGACCCAATaGGAAAGAAGGCAATGTGTG +
Preference number: 2 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKHCWTQ*ERRQCV
Trigger: CACACATTGCCTTCTTTCTCATTGGGTCCAGCAATG...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACATTGCTGGACCCAATaGGAAAGAAGGCAATGTGTG +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLAHCWTQ*ERRQCV
Trigger: CACACATTGCCTTCTTTCTCATTGGGTCCAGCAATG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTAATTGCCCAACCTTTTaGAGACCAGGCTTGGGAAAA +
Preference number: 2 (lower is better)
Translates to: TSCDESAVTAPNQKLGNINCPTF*RPGLGK
Trigger: TTTTCCCAAGCCTGGTCTTCAAAAGGTTGGGCAATT...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGCTCCTCAGCAGGACATaGAACACATCCTCTTGTTCA +
Preference number: 2 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKLLSRT*NTSSCS
Trigger: TGAACAAGAGGATGTGTTTCATGTCCTGCTGAGGAG...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTATTGTTTAAGAAACTaGAATGCTAAGCTTCCTCCC +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPYCLRN*NAKLPP
Trigger: GGGAGGAAGCTTAGCATTTCAGTTTCTTAAACAATA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATGGGCACAGCTTCATTTaGGATCAAGTCTGCTCCCCC +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNGHSFI*DQVCSP
Trigger: GGGGGAGCAGACTTGATCTCAAATGAAGCTGTGCCC...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTTCGGGAACCAGAATTTaGCAGCTAGACAGAATCTTC +
Preference number: 2 (lower is better)
Translates to: TSCDESAVTAPNQKLGNISGTRI*QLDRIF
Trigger: GAAGATTCTGTCTAGCTGTCAAATTCTGGTTCCCGA...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATTACAGTGGGGACAGGTaGGATCTGAGGAGGATGTGC +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNYSGDR*DLRRMC
Trigger: GCACATCCTCCTCAGATCTCACCTGTCCCCACTGTA...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCATTTGTAGAGGTCACCTaGACCCTGCAATGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLAFVEVT*TLQCGF
Trigger: GAAACCACATTGCAGGGTTCAGGTGACCTCTACAAA...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCATGGGTGGTCTTTCTATaGATGCCTGTGCATGTGACA +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLAWVVFL*MPVHVT
Trigger: TGTCACATGCACAGGCATTCATAGAAAGACCACCCA...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTGGTTTAGTTAGATACTaGCACGGCATTTTGTGCCCT +
Preference number: 2 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIGLVRY*HGILCP
Trigger: AGGGCACAAAATGCCGTGGCAGTATCTAACTAAACC...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATCAGCCTATTCTAAAATaGAAGGGAAGAAAAAGTGTA +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHQPILK*KGRKSV
Trigger: TACACTTTTTCTTCCCTTGCATTTTAGAATAGGCTG...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATTTAATACATGATTGCTaGCCATCATACAGTACTTCA +
Preference number: 2 (lower is better)
Translates to: VLENELGWPGEADGLYKHLIHDC*PSYSTS
Trigger: TGAAGTACTGTATGATGGGCAGCAATCATGTATTAA...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGTCTCCTCTTTCTTCCTaGGACTGGGCAGACTTGTAT +
Preference number: 2 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKSPLSS*DWADLY
Trigger: ATACAAGTCTGCCCAGTCCCAGGAAGAAAGAGGAGA...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTTCAGAAACTAACTGGTaGTCACTAGGGGAAAGAGCT +
Preference number: 2 (lower is better)
Translates to: TSCDESAVTAPNQKLGNISETNW*SLGERA
Trigger: AGCTCTTTCCCCTAGTGACCACCAGTTAGTTTCTGA...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAGCCCCCACAGCGCTTTaGGACAGGATGACTAACGCA +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKAPTAL*DRMTNA
Trigger: TGCGTTAGTCATCCTGTCCCAAAGCGCTGTGGGGGC...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp TGGCGTGTAAGTAACTACTTAGACATTTGCATGTCAGCCCTCTTTCACCTAATACACACATTCCTCTCATaGAGAGTAAGCCCTTGCCAC +
Preference number: 2 (lower is better)
Translates to: WRVSNYLDICMSALFHLIHTFLS*RVSPCH
Trigger: GTGGCAAGGGCTTACTCTCCATGAGAGGAATGTGTG...TATTAGGTGAAAGAGGGCTGACATGCAAATGTCTAAGTAGTTACTTACACGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCATTACAAGATGATCAGTaGCGCAGCCACATACTGTCT +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLALQDDQ*RSHILS
Trigger: AGACAGTATGTGGCTGCGTCACTGATCATCTTGTAA...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATTCGCACTCCGCCTGGTaGATACAAGGTAACATCCTG +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNSHSAW*IQGNIL
Trigger: CAGGATGTTACCTTGTATTCACCAGGCGGAGTGCGA...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAGAAGAAGATGCAGCATaGCCTTTTCCTCCATACCAA +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLAEEDAA*PFPPYQ
Trigger: TTGGTATGGAGGAAAAGGGCATGCTGCATCTTCTTC...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATGCCACGGCATTTTGTaGCCTGGACAAAGTAGCCGC +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKCHGIL*PGQSSR
Trigger: GCGGCTACTTTGTCCAGGGCACAAAATGCCGTGGCA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAATTTTGTAAGACACTaGCCTGCTGATGTAAAACTT +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPNFVRH*PADVKL
Trigger: AAGTTTTACATCAGCAGGGCAGTGTCTTACAAAATT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCAGCCTATTCTAAAATaGAAGGGAAGAAAAAGTGTA +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPQPILK*KGRKSV
Trigger: TACACTTTTTCTTCCCTTGCATTTTAGAATAGGCTG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTTAATACATGATTGCTaGCCATCATACAGTACTTCA +
Preference number: 2 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPLIHDC*PSYSTS
Trigger: TGAAGTACTGTATGATGGGCAGCAATCATGTATTAA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACACCTGAGGCAGAGATaGTACTACCCTCTTCTGGGG +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKHLRQR*YYPLLG
Trigger: CCCCAGAAGAGGGTAGTAGCATCTCTGCCTCAGGTG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAGGCAGCAGAGAATTCTaGTTCCTAAAACATTCTTTC +
Preference number: 2 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGGSREF*FLKHSF
Trigger: GAAAGAATGTTTTAGGAACCAGAATTCTCTGCTGCC...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAGCAAAGATGTTAGTGTaGATCCAGCAAGTACCATTA +
Preference number: 2 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGAKMLV*IQQVPL
Trigger: TAATGGTACTTGCTGGATCCACACTAACATCTTTGC...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTGCTCTATTCTCTGTCTaGGAATTCAGCTGCCAAATT +
Preference number: 2 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIALFSV*EFSCQI
Trigger: AATTTGGCAGCTGAATTCCCAGACAGAGAATAGAGC...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCATCGTGGTATTTTTGTTaGAGAAACACTGGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLASWYFC*RNTGSR
Trigger: TCTGCTGCCAGTGTTTCTTCAACAAAAATACCACGA...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATGAATGCCTGTGCATGTaGCAAAGCTGCAGCAAACTC +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNECLCM*QSCSKL
Trigger: GAGTTTGCTGCAGCTTTGTCACATGCACAGGCATTC...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATAGGTCAGGAAGAAGATaGAGCATGCCCTTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNRSGRR*SMPFSS
Trigger: GGAGGAAAAGGGCATGCTGCATCTTCTTCCTGACCT...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTTCCTCTTTTGTTGGATaGGAAATTCCATTCTGTTCC +
Preference number: 2 (lower is better)
Translates to: TSCDESAVTAPNQKLGNISSFVG*EIPFCS
Trigger: GGAACAGAATGGAATTTCCCATCCAACAAAAGAGGA...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAGCTAAGCCTGGCTCCTaGGCACAGCTTCATTTGAGA +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKAKPGS*AQLHLR
Trigger: TCTCAAATGAAGCTGTGCCCAGGAGCCAGGCTTAGC...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACTGAACCCTGCAATGTaGTTTCGAACTAAAGCTAGA +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLALNPAM*FRTKAR
Trigger: TCTAGCTTTAGTTCGAAACCACATTGCAGGGTTCAG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 90 bp CAGAGACACATGTTGATGAATGATCAAATTCAATCCCCTGATCAGTaGTATGATCCTATCTTAGGAAAGGCAGCAATTGCCATGTTGAGG +
Preference number: 2 (lower is better)
Translates to: QRHMLMNDQIQSPDQ*YDPILGKAAIAMLR
Trigger: CCTCAACATGGCAATTGCTGCCTTTCCTAAGATAGGATCATACAACTGATCAGGGGATTGAATTTGATCATTCATCAACATGTGTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACCAGGTCTCTCTACCTaGGGAAACTTGAAGCCAATC +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKPGLST*GNLKPI
Trigger: GATTGGCTTCAAGTTTCCGCAGGTAGAGAGACCTGG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATCTAATGGTTGGAATCTaGTCGTCTCAAGGTGCTGGT +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNLMVGI*SSQGAG
Trigger: ACCAGCACCTTGAGACGAGCAGATTCCAACCATTAG...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGGGCAGCAGAGAATTCTaGTTCCTAAAACATTCTTTC +
Preference number: 2 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKGSREF*FLKHSF
Trigger: GAAAGAATGTTTTAGGAACCAGAATTCTCTGCTGCC...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACTTTCTTCCTGGGACTaGGCAGACTTGTATGCTCGT +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKLSSWD*ADLYAR
Trigger: ACGAGCATACAAGTCTGCCCAGTCCCAGGAAGAAAG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGATAGACAGCAGGGCCTaGAGTTACAATCTGAAATTT +
Preference number: 2 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKIDSRA*SYNLKF
Trigger: AAATTTCAGATTGTAACTCCAGGCCCTGCTGTCTAT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 90 bp GATCAGTTGTATGATCCTATCTTAGGAAAGGCAGCAATTGCCATGTaGAGGAAAGGATCAGATGTACAACCAACAAATGAGATTACCACA +
Preference number: 2 (lower is better)
Translates to: DQLYDPILGKAAIAM*RKGSDVQPTNEITT
Trigger: TGTGGTAATCTCATTTGTTGGTTGTACATCTGATCCTTTCCTCAACATGGCAATTGCTGCCTTTCCTAAGATAGGATCATACAACTGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCATTCTTCAAATCAGCGTaGATTATTTCCACCTTTGCA +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLAFFKSA*IISTFA
Trigger: TGCAAAGGTGGAAATAATTCACGCTGATTTGAAGAA...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATACACCCTTACAAGATaGTCAGTGACGCAGCCACAT +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKYTLTR*SVTQPH
Trigger: ATGTGGCTGCGTCACTGATCATCTTGTAAGGGTGTA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATTCGGGAACCAGAATTTaGCAGCTAGACAGAATCTTC +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNSGTRI*QLDRIF
Trigger: GAAGATTCTGTCTAGCTGTCAAATTCTGGTTCCCGA...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACTACAAATCATCACCTaGGGCAGAGATGCTACTACC +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKLQIIT*GRDATT
Trigger: GGTAGTAGCATCTCTGCCTCAGGTGATGATTTGTAG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATCAGGAAAGAGAACGATaGTTGGTGATTGAAACTGCC +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNQERER*LVIETA
Trigger: GGCAGTTTCAATCACCAAGCATCGTTCTCTTTCCTG...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACACTACAGAAGGCACTaGAGCCACTTTACAGACAAG +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKHYRRH*SHFTDK
Trigger: CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAAGTCACTCATTGAGTTaGCGACTAATTGCCCCATGC +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKSHSLS*RLIAPC
Trigger: GCATGGGGCAATTAGTCGGCAACTCAATGAGTGACT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATCTCCTCTTTCTTCCTaGGACTGGGCAGACTTGTAT +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKSPLSS*DWADLY
Trigger: ATACAAGTCTGCCCAGTCCCAGGAAGAAAGAGGAGA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAAAGAAGGAGAATGAATaGAGACGCCACCATTTTTAT +
Preference number: 2 (lower is better)
Translates to: AGIPSTNNANLDKEENLAKKENE*RRHHFY
Trigger: ATAAAAATGGTGGCGTCTCCATTCATTCTCCTTCTT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAACCCTCTTAGCTGGGTaGTCTTTCTATGAATGCCTG +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKTLLAG*SFYECL
Trigger: CAGGCATTCATAGAAAGACCACCCAGCTAAGAGGGT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACCAGAGCTAGCAACATaGACCACAGATATACTGGTG +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKPELAT*TTDILV
Trigger: CACCAGTATATCTGTGGTCCATGTTGCTAGCTCTGG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 90 bp CGGGAAGAAATTTACATTTCAAACTCTGAAAAATCAGTGTCTAGGTaGGCAGCAGTACTCTGGAAACTGATAAAACCAAATTCGGTCCTA +
Preference number: 2 (lower is better)
Translates to: REEIYISNSEKSVSR*AAVLWKLIKPNSVL
Trigger: TAGGACCGAATTTGGTTTTATCAGTTTCCAGAGTACTGCTGCCAACCTAGACACTGATTTTTCAGAGTTTGAAATGTAAATTTCTTCCCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATTCGTGGTATTTTTGTTaGAGAAACACTGGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNSWYFC*RNTGSR
Trigger: TCTGCTGCCAGTGTTTCTTCAACAAAAATACCACGA...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAAAGGAAGAAGGAGAATaGATGGAGACGCCACCATTT +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKKEEGE*METPPF
Trigger: AAATGGTGGCGTCTCCATTCATTCTCCTTCTTCCTT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAAATTGCCCAACCTTTTaGAGACCAGGCTTGGGAAAA +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKNCPTF*RPGLGK
Trigger: TTTTCCCAAGCCTGGTCTTCAAAAGGTTGGGCAATT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATCAAGGTTAAGATTCTaGAACGTACCCCTAAACCGG +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKSRLRF*NVPLNR
Trigger: CCGGTTTAGGGGTACGTTTCAGAATCTTAACCTTGA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAGCAGCAAACTCATTATaGGGATGTACTGTCATGCCA +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKAANSL*GCTVMP
Trigger: TGGCATGACAGTACATCCTCATAATGAGTTTGCTGC...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CTTAGACATGACTGTGGTTCAAGTTTGGCAGACAGGTTTAAATGTCAAATCCAAATGGATGCCTCTATTTaGATGACCTCTGAGTATGAA +
Preference number: 2 (lower is better)
Translates to: LRHDCGSSLADRFKCQIQMDASI*MTSEYE
Trigger: TTCATACTCAGAGGTCATGCAAATAGAGGCATCCAT...TTGGATTTGACATTTAAACCTGTCTGCCAAACTTGAACCACAGTCATGTCTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469930.2
3UTR-3UTR CCA 90 bp TGGCGTGTAAGTAACTACTTAGACATTTGCATGTCAGCCCTCTTTCACCTAATAAAATTATCCTTCTGTTaGTCACACATTCCTCTCATG +
Preference number: 2 (lower is better)
Translates to: WRVSNYLDICMSALFHLIKLSFC*SHIPLM
Trigger: CATGAGAGGAATGTGTGACCAACAGAAGGATAATTT...TATTAGGTGAAAGAGGGCTGACATGCAAATGTCTAAGTAGTTACTTACACGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR-3UTR TCA 90 bp CTTAGACATGACTGTGGTTCAAGTTTGGCAGACAGGTTTAAATGTCAAATCCAATTTTTCATTCCTGTATaGCATGGATGCCTCTATTTG +
Preference number: 2 (lower is better)
Translates to: LRHDCGSSLADRFKCQIQFFIPV*HGCLYL
Trigger: CAAATAGAGGCATCCATGTCATACAGGAATGAAAAA...TTGGATTTGACATTTAAACCTGTCTGCCAAACTTGAACCACAGTCATGTCTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469930.2
3UTR-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATCTTTCCATCATGCCTaGCCATCAAAAGGTCAGAAT +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKSFHHA*PSKGQN
Trigger: ATTCTGACCTTTTGATGGTCAGGCATGATGGAAAGA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAAAATACAATCAGGGGTaGGATATTCGGGAACCAGAA +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKKYNQG*DIREPE
Trigger: TTCTGGTTCCCGAATATCTCACCCCTGATTGTATTT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAAACAGACCCTTCCTTTaGGGCATCTCTTCACAAATT +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKNRPFL*GISSQI
Trigger: AATTTGTGAAGAGATGCCGCAAAGGAAGGGTCTGTT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATGTTCTCTACATCTGTaGCTACTCTGTGAGCTTTGT +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKCSLHL*LLCELC
Trigger: ACAAAGCTCACAGAGTAGGCACAGATGTAGAGAACA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATTCCTCTTTTGTTGGATaGGAAATTCCATTCTGTTCC +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNSSFVG*EIPFCS
Trigger: GGAACAGAATGGAATTTCCCATCCAACAAAAGAGGA...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATTTGTTGAAGAAACACTaGCAGCAGAGAATTCTGGTT +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNLLKKH*QQRILV
Trigger: AACCAGAATTCTCTGCTGCCAGTGTTTCTTCAACAA...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 90 bp TTGCACAGAAGATGTTCTTCAAATCAGCGTGAATTATTTCCACCTTaGCAATTTCTGAATTTTGTAAGACACTGCCCTGCTGATGTAAAA +
Preference number: 2 (lower is better)
Translates to: LHRRCSSNQRELFPP*QFLNFVRHCPADVK
Trigger: TTTTACATCAGCAGGGCAGTGTCTTACAAAATTCAGAAATTGCAAAGGTGGAAATAATTCACGCTGATTTGAAGAACATCTTCTGTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATTTCTTCAAATCAGCGTaGATTATTTCCACCTTTGCA +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNFFKSA*IISTFA
Trigger: TGCAAAGGTGGAAATAATTCACGCTGATTTGAAGAA...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAAGTTTCTTTCCATCATaGCTGACCATCAAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKSFFPS*LTIKRS
Trigger: TGACCTTTTGATGGTCAGGCATGATGGAAAGAAACT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATTGTATAAAAGTTCCATaGTTTGAAGAGCCTATGGGA +
Preference number: 2 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNCIKVP*FEEPMG
Trigger: TCCCATAGGCTCTTCAAAGCATGGAACTTTTATACA...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAGCAAAGATGTTAGTGTaGATCCAGCAAGTACCATTA +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKAKMLV*IQQVPL
Trigger: TAATGGTACTTGCTGGATCCACACTAACATCTTTGC...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 90 bp GTTATGAAAAGTAACAGTTTACTTCTTATCCAAATCAATCACTACTaGACATTTAAGGAGAAAGTCAACTGCAGCCAGAATAAGTCCCCT +
Preference number: 2 (lower is better)
Translates to: VMKSNSLLLIQINHY*TFKEKVNCSQNKSP
Trigger: AGGGGACTTATTCTGGCTGCAGTTGACTTTCTCCTTAAATGTCAAGTAGTGATTGATTTGGATAAGAAGTAAACTGTTACTTTTCATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646891.1
3UTR-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATGTATAAAAGTTCCATaGTTTGAAGAGCCTATGGGA +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKCIKVP*FEEPMG
Trigger: TCCCATAGGCTCTTCAAAGCATGGAACTTTTATACA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAAATTTTGTAAGACACTaGCCTGCTGATGTAAAACTT +
Preference number: 2 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKNFVRH*PADVKL
Trigger: AAGTTTTACATCAGCAGGGCAGTGTCTTACAAAATT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTAAGAGACCCCTGACCTaGTGCCTCAAAATGGCCAAA +
Preference number: 3 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPKRPLT*CLKMAK
Trigger: TTTGGCCATTTTGAGGCACAAGGTCAGGGGTCTCTT...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646891.1
3UTR TCA 72 bp CCTCCACCCTGGCCCCCACAGCGCTTTGGGACAGGATaGCTAACGCAGTCCAGCTTCATGTGCAATCAAGTC +
Preference number: 3 (lower is better)
Translates to: PPPWPPQRFGTG*LTQSSFMCNQV
Trigger: GACTTGATTGCACATGAAGCTGGACTGCGTTAGTCATCCTGTCCCAAAGCGCTGTGGGGGCCAGGGTGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 72 bp CGCATATGTGCTGTACATGAGAACCAGCGGTCACGGTaGTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAG +
Preference number: 3 (lower is better)
Translates to: RICAVHENQRSR*WRMNSAGREKQ
Trigger: CTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCACCGTGACCGCTGGTTCTCATGTACAGCACATATGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTCTAAGAGTGACTCACTaGAGAGAAAGGCCATTTAAG +
Preference number: 3 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPLRVTH*RERPFK
Trigger: CTTAAATGGCCTTTCTCTCAAGTGAGTCACTCTTAG...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
3UTR TCA 72 bp CTGTACATGAGAACCAGCGGTCACGGTGCTGGAGAATaGACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTA +
Preference number: 3 (lower is better)
Translates to: LYMRTSGHGAGE*TRLAGRSRWFV
Trigger: TACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCACCGTGACCGCTGGTTCTCATGTACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGTCATAAAGGATGCCTaGAGACCTCCACCCTGGCCC +
Preference number: 3 (lower is better)
Translates to: VLENELGWPGEADGLYKHVIKDA*RPPPWP
Trigger: GGGCCAGGGTGGAGGTCTCAAGGCATCCTTTATGAC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTAGCTGGCAACAAAAGTaGCATGAGAAACTGAAGTTT +
Preference number: 3 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPSWQQK*HEKLKF
Trigger: AAACTTCAGTTTCTCATGCAACTTTTGTTGCCAGCT...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646891.1
3UTR GCA 72 bp GCCAGAGACCCCGGAGGTCAGGAAGAAGATGCAGCATaGCCTTTTCCTCCATACCAAGACACATCTACTCAC +
Preference number: 3 (lower is better)
Translates to: ARDPGGQEEDAA*PFPPYQDTSTH
Trigger: GTGAGTAGATGTGTCTTGGTATGGAGGAAAAGGGCATGCTGCATCTTCTTCCTGACCTCCGGGGTCTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 72 bp CCCAGGCTGCACATGTTCTACCTCCTCAGCAGGACATaGAACACATCCTCTTGTTCAAGCCCAGGTCTCTCT +
Preference number: 3 (lower is better)
Translates to: PRLHMFYLLSRT*NTSSCSSPGLS
Trigger: AGAGAGACCTGGGCTTGAACAAGAGGATGTGTTTCATGTCCTGCTGAGGAGGTAGAACATGTGCAGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CCA 72 bp GAACCAGCGGTCACGGTGCTGGAGAATGAACTCGGCTaGCCGGGAGAAGCAGATGGTTTGTACAAACATTTT +
Preference number: 3 (lower is better)
Translates to: EPAVTVLENELG*PGEADGLYKHF
Trigger: AAAATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCACCGTGACCGCTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CCA 72 bp TTCGAACTAAAGCTAGAGATGAGGTTTGCAAGCAGCTaGCGGGTGGATGTACAGTGGGGACAGGTGAGATCT +
Preference number: 3 (lower is better)
Translates to: FELKLEMRFASS*RVDVQWGQVRS
Trigger: AGATCTCACCTGTCCCCACTGTACATCCACCCGCCAGCTGCTTGCAAACCTCATCTCTAGCTTTAGTTCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CCA 72 bp ATGGACCACAGATATACTGGTGACTCCGCTCTCCTCTaGCCAAGCTACAAATCATCACCTGAGGCAGAGATG +
Preference number: 3 (lower is better)
Translates to: MDHRYTGDSALL*PSYKSSPEAEM
Trigger: CATCTCTGCCTCAGGTGATGATTTGTAGCTTGGCCAGAGGAGAGCGGAGTCACCAGTATATCTGTGGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 72 bp AATTTTCTGCCAACTCTCCCGCATATGTGCTGTACATaGGAACCAGCGGTCACGGTGCTGGAGAATGAACTC +
Preference number: 3 (lower is better)
Translates to: NFLPTLPHMCCT*EPAVTVLENEL
Trigger: GAGTTCATTCTCCAGCACCGTGACCGCTGGTTCTCATGTACAGCACATATGCGGGAGAGTTGGCAGAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 72 bp TCAGACTTTAGGCAGCAAGATGAGTCTCTCCTTGGGTaGCCACCTGGACTGGTAGGTATGATAGTGGTGACA +
Preference number: 3 (lower is better)
Translates to: SDFRQQDESLLG*PPGLVGMIVVT
Trigger: TGTCACCACTATCATACCTACCAGTCCAGGTGGTCACCCAAGGAGAGACTCATCTTGCTGCCTAAAGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR-3UTR CAA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGACACTATCTAGCCTGCTaGGTTAGACAGACCCCTCAG +
Preference number: 3 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGHYLAC*VRQTPQ
Trigger: CTGAGGGGTCTGTCTAACCAAGCAGGCTAGATAGTG...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATAAATCAGTGTCTAGGTaGGCAGCAGTACTCTGGAAA +
Preference number: 3 (lower is better)
Translates to: VLENELGWPGEADGLYKHKSVSR*AAVLWK
Trigger: TTTCCAGAGTACTGCTGCCAACCTAGACACTGATTT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATATACACTGGCTTACATaGGCTGTGTCCTCATACACA +
Preference number: 3 (lower is better)
Translates to: VLENELGWPGEADGLYKHIHWLT*AVSSYT
Trigger: TGTGTATGAGGACACAGCCAATGTAAGCCAGTGTAT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 72 bp AATATGCTAAGCCTGGCTCCTGGGCACAGCTTCATTTaGGATCAAGTCTGCTCCCCCGTTCAAATGAGATAC +
Preference number: 3 (lower is better)
Translates to: NMLSLAPGHSFI*DQVCSPVQMRY
Trigger: GTATCTCATTTGAACGGGGGAGCAGACTTGATCTCAAATGAAGCTGTGCCCAGGAGCCAGGCTTAGCATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 72 bp GTCGCCATAAGGTTTGGAGTGGTGAAACAGGAACCGTaGATTCACTGCAGTTCAAACAGGAAGCATCTCCCT +
Preference number: 3 (lower is better)
Translates to: VAIRFGVVKQEP*IHCSSNRKHLP
Trigger: AGGGAGATGCTTCCTGTTTGAACTGCAGTGAATTCACGGTTCCTGTTTCACCACTCCAAACCTTATGGCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 72 bp TTCATTGCTGGACCCAATGAGAAAGAAGGCAATGTGTaGCAGCACTATCTAGCCTGCTTGGTTAGACAGACC +
Preference number: 3 (lower is better)
Translates to: FIAGPNEKEGNV*QHYLACLVRQT
Trigger: GGTCTGTCTAACCAAGCAGGCTAGATAGTGCTGGCACACATTGCCTTCTTTCTCATTGGGTCCAGCAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 72 bp ACTTTGATGCCCTCTGCTCCCTTATTACAACCAAGCTaGCTGGAGGCTTTAAGCATACAGATGGGCTTGCTA +
Preference number: 3 (lower is better)
Translates to: TLMPSAPLLQPS*LEALSIQMGLL
Trigger: TAGCAAGCCCATCTGTATGCTTAAAGCCTCCAGGCAGCTTGGTTGTAATAAGGGAGCAGAGGGCATCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR CCA 72 bp GGCGATATCATGAAGGCCAAACTGAGTCTATATATGTaGCATGGCCAAAGGAAACACGGAGGACCCATGGAT +
Preference number: 3 (lower is better)
Translates to: GDIMKAKLSLYM*HGQRKHGGPMD
Trigger: ATCCATGGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTTCATGATATCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAAATCAGTGTCTAGGTaGGCAGCAGTACTCTGGAAA +
Preference number: 3 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPKSVSR*AAVLWK
Trigger: TTTCCAGAGTACTGCTGCCAACCTAGACACTGATTT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAGAAAGAGAACGATGCTaGGTGATTGAAACTGCCCCA +
Preference number: 3 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGERERC*VIETAP
Trigger: TGGGGCAGTTTCAATCACCAAGCATCGTTCTCTTTC...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGTACTGCCACGGCATTTaGTGCCCTGGACAAAGTAGC +
Preference number: 3 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKYCHGI*CPGQSS
Trigger: GCTACTTTGTCCAGGGCACAAAATGCCGTGGCAGTA...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATAGAGAGGCAGTATTATaGCACAGAAGATGTTCTTCA +
Preference number: 3 (lower is better)
Translates to: VLENELGWPGEADGLYKHREAVL*HRRCSS
Trigger: TGAAGAACATCTTCTGTGCAATAATACTGCCTCTCT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCATGGGCACAGCTTCATTaGAGATCAAGTCTGCTCCCC +
Preference number: 3 (lower is better)
Translates to: AGIPSTNNANLDKEENLAWAQLH*RSSLLP
Trigger: GGGGAGCAGACTTGATCTCAAATGAAGCTGTGCCCA...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTTCGGGAACCAGAATTaGACAGCTAGACAGAATCTT +
Preference number: 3 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPFGNQN*TARQNL
Trigger: AAGATTCTGTCTAGCTGTCAAATTCTGGTTCCCGAA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 72 bp AACACATCCTCTTGTTCAAGCCCAGGTCTCTCTACCTaGGGAAACTTGAAGCCAATCTTGGTAAAGGGAACA +
Preference number: 3 (lower is better)
Translates to: NTSSCSSPGLST*GNLKPILVKGT
Trigger: TGTTCCCTTTACCAAGATTGGCTTCAAGTTTCCGCAGGTAGAGAGACCTGGGCTTGAACAAGAGGATGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 72 bp AGACCCTTCCTTTGCGGCATCTCTTCACAAATTTTCTaGCAACTCTCCCGCATATGTGCTGTACATGAGAAC +
Preference number: 3 (lower is better)
Translates to: RPFLCGISSQIF*QLSRICAVHEN
Trigger: GTTCTCATGTACAGCACATATGCGGGAGAGTTGGCAGAAAATTTGTGAAGAGATGCCGCAAAGGAAGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 72 bp GCCAAATTACAGCCTTCCTTATACTTTGATGCCCTCTaGTCCCTTATTACAACCAAGCTGCCTGGAGGCTTT +
Preference number: 3 (lower is better)
Translates to: AKLQPSLYFDAL*SLITTKLPGGF
Trigger: AAAGCCTCCAGGCAGCTTGGTTGTAATAAGGGAGCAGAGGGCATCAAAGTATAAGGAAGGCTGTAATTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR CCA 72 bp GAAAAGAGGAATGTGTGTGTGAGTCGCCATAAGGTTTaGAGTGGTGAAACAGGAACCGTGAATTCACTGCAG +
Preference number: 3 (lower is better)
Translates to: EKRNVCVSRHKV*SGETGTVNSLQ
Trigger: CTGCAGTGAATTCACGGTTCCTGTTTCACCACTCCAAACCTTATGGCGACTCACACACACATTCCTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAAATTCAGCTGCCAAATaGCCCAACCTTTTGAAGACC +
Preference number: 3 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGNSAAK*PNLLKT
Trigger: GGTCTTCAAAAGGTTGGGCAATTTGGCAGCTGAATT...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 72 bp AATCTCCCAAGCTGTAGCAGCAGTTTCTTTCCATCATaGCTGACCATCAAAAGGTCAGAATTCAGGGTCTCT +
Preference number: 3 (lower is better)
Translates to: NLPSCSSSFFPS*LTIKRSEFRVS
Trigger: AGAGACCCTGAATTCTGACCTTTTGATGGTCAGGCATGATGGAAAGAAACTGCTGCTACAGCTTGGGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 72 bp CCTAAAATTGCTCTATTCTCTGTCTGGGAATTCAGCTaGCAAATTGCCCAACCTTTTGAAGACCAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: PKIALFSVWEFS*QIAQPFEDQAW
Trigger: CCAAGCCTGGTCTTCAAAAGGTTGGGCAATTTGGCAGCTGAATTCCCAGACAGAGAATAGAGCAATTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 72 bp TCTGGCTATGGTGTTTATAGCCTAATGGTTGGAATCTaGTCGTCTCAAGGTGCTGGTATTCCTAGCACTAAC +
Preference number: 3 (lower is better)
Translates to: SGYGVYSLMVGI*SSQGAGIPSTN
Trigger: GTTAGTGCTAGGAATACCAGCACCTTGAGACGAGCAGATTCCAACCATTAGGCTATAAACACCATAGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CCA 72 bp AGATGCTACTACCCTCTTCTGGGGCTCAACTACCGATaGGCATCAGTAATCCATCCCAGTATAACATTTCAA +
Preference number: 3 (lower is better)
Translates to: RCYYPLLGLNYR*ASVIHPSITFQ
Trigger: TTGAAATGTTATACTGGGATGGATTACTGATGCCCATCGGTAGTTGAGCCCCAGAAGAGGGTAGTAGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CCA 72 bp TATCATGAAGGCCAAACTGAGTCTATATATGTGGCATaGCCAAAGGAAACACGGAGGACCCATGGATGCATT +
Preference number: 3 (lower is better)
Translates to: YHEGQTESIYVA*PKETRRTHGCI
Trigger: AATGCATCCATGGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTTCATGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAGAAAGAGAACGATGCTaGGTGATTGAAACTGCCCCA +
Preference number: 3 (lower is better)
Translates to: AGIPSTNNANLDKEENLAERERC*VIETAP
Trigger: TGGGGCAGTTTCAATCACCAAGCATCGTTCTCTTTC...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGGGGCAAGCTGCATTTTaGTTCCATCCCTCAGAAACT +
Preference number: 3 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKGQAAF*FHPSET
Trigger: AGTTTCTGAGGGATGGAACAAAAATGCAGCTTGCCC...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAGGGCAAGCTGCATTTTaGTTCCATCCCTCAGAAACT +
Preference number: 3 (lower is better)
Translates to: AGIPSTNNANLDKEENLAGQAAF*FHPSET
Trigger: AGTTTCTGAGGGATGGAACAAAAATGCAGCTTGCCC...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCTTGGTTGGTCTGATTaGATTTGTGTTCCTAAATTC +
Preference number: 3 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPLGWSD*ICVPKF
Trigger: GAATTTAGGAACACAAATCAAATCAGACCAACCAAG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTTCTACCTGCGGAAACTaGAAGCCAATCTTGGTAAAG +
Preference number: 3 (lower is better)
Translates to: TSCDESAVTAPNQKLGNISTCGN*KPILVK
Trigger: CTTTACCAAGATTGGCTTCAAGTTTCCGCAGGTAGA...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGATGAAACACATCCTCTaGTTCAAGCCCAGGTCTCTC +
Preference number: 3 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKMKHIL*FKPRSL
Trigger: GAGAGACCTGGGCTTGAACAAGAGGATGTGTTTCAT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAATGAAACACATCCTCTaGTTCAAGCCCAGGTCTCTC +
Preference number: 3 (lower is better)
Translates to: AGIPSTNNANLDKEENLAMKHIL*FKPRSL
Trigger: GAGAGACCTGGGCTTGAACAAGAGGATGTGTTTCAT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp AAGGTTCATCAGACTTTAGGCAGCAAGATGAGTCTCTCCTTGGGTGACCACCTGAAAATTATCCTTCTGTaGGTCACACATTCCTCTCAT +
Preference number: 3 (lower is better)
Translates to: KVHQTLGSKMSLSLGDHLKIILL*VTHSSH
Trigger: ATGAGAGGAATGTGTGACCAACAGAAGGATAATTTT...CAGGTGGTCACCCAAGGAGAGACTCATCTTGCTGCCTAAAGTCTGATGAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR TCA 72 bp GCCTGTGCATGTGACAAAGCTGCAGCAAACTCATTATaGGGATGTACTGTCATGCCAAGCCTACTGAAAATT +
Preference number: 3 (lower is better)
Translates to: ACACDKAAANSL*GCTVMPSLLKI
Trigger: AATTTTCAGTAGGCTTGGCATGACAGTACATCCTCATAATGAGTTTGCTGCAGCTTTGTCACATGCACAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 72 bp GTTGGTCACACATTCCTCTCATGGAGAGTAAGCCCTTaGCACATCATTTATTATACTCCCATGGAGGACAAA +
Preference number: 3 (lower is better)
Translates to: VGHTFLSWRVSP*HIIYYTPMEDK
Trigger: TTTGTCCTCCATGGGAGTATAATAAATGATGTGGCAAGGGCTTACTCTCCATGAGAGGAATGTGTGACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR CCA 72 bp AACCACAGCATGGAATATGTTTTCTTTTACATCCAATaGCCAGGTCATAAAGGATGCCTTGAGACCTCCACC +
Preference number: 3 (lower is better)
Translates to: NHSMEYVFFYIQ*PGHKGCLETST
Trigger: GGTGGAGGTCTCAAGGCATCCTTTATGACCTGGCCATTGGATGTAAAAGAAAACATATTCCATGCTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACTCGTGGTATTTTTGTaGAAGAAACACTGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: AGIPSTNNANLDKEENLALVVFL*KKHWQQ
Trigger: CTGCTGCCAGTGTTTCTTCAACAAAAATACCACGAG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGCTCGTGGTATTTTTGTaGAAGAAACACTGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKLVVFL*KKHWQQ
Trigger: CTGCTGCCAGTGTTTCTTCAACAAAAATACCACGAG...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAAACTTGAAGCCAATCTaGGTAAAGGGAACACAGCCA +
Preference number: 3 (lower is better)
Translates to: AGIPSTNNANLDKEENLANLKPI*VKGTQP
Trigger: TGGCTGTGTTCCCTTTACCAAGATTGGCTTCAAGTT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 72 bp ACAAAATTCCAGAACAGGAAAGAGAACGATGCTTGGTaGTTGAAACTGCCCCATCAGATGATCAGCCACAAA +
Preference number: 3 (lower is better)
Translates to: TKFQNRKENDAW*LKLPHQMISHK
Trigger: TTTGTGGCTGATCATCTGATGGGGCAGTTTCAATCACCAAGCATCGTTCTCTTTCCTGTTCTGGAATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 72 bp AAAAACCCAAACACTTATCTTCATTGCTGGACCCAATaGGAAAGAAGGCAATGTGTGCCAGCACTATCTAGC +
Preference number: 3 (lower is better)
Translates to: KNPNTYLHCWTQ*ERRQCVPALSS
Trigger: GCTAGATAGTGCTGGCACACATTGCCTTCTTTCTCATTGGGTCCAGCAATGAAGATAAGTGTTTGGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 72 bp TACTCTGTGAGCTTTGTTGTTTATGCTAGTTTGCAGTaGCTTCCAACTCATACTCCACCAAAACACACGTGG +
Preference number: 3 (lower is better)
Translates to: YSVSFVVYASLQ*LPTHTPPKHTW
Trigger: CCACGTGTGTTTTGGTGGAGTATGAGTTGGAAGTCACTGCAAACTAGCATAAACAACAAAGCTCACAGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 72 bp CTCCCTACCAAAAATAAAACACACTACAGAAGGCACTaGAGCCACTTTACAGACAAGACTGTTACACCCTTA +
Preference number: 3 (lower is better)
Translates to: LPTKNKTHYRRH*SHFTDKTVTPL
Trigger: TAAGGGTGTAACAGTCTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACACTATCTAGCCTGCTaGGTTAGACAGACCCCTCAG +
Preference number: 3 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKHYLAC*VRQTPQ
Trigger: CTGAGGGGTCTGTCTAACCAAGCAGGCTAGATAGTG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAATTTCTTTCAAGTCCTaGGCTATAGCTTGGTTGGTC +
Preference number: 3 (lower is better)
Translates to: AGIPSTNNANLDKEENLAISFKS*AIAWLV
Trigger: GACCAACCAAGCTATAGCCAAGGACTTGAAAGAAAT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCATTCGGGAACCAGAATTaGACAGCTAGACAGAATCTT +
Preference number: 3 (lower is better)
Translates to: AGIPSTNNANLDKEENLAFGNQN*TARQNL
Trigger: AAGATTCTGTCTAGCTGTCAAATTCTGGTTCCCGAA...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CCA 72 bp TTACCAGTATTTTTAATTTTACCAGAGCTAGCAACATaGACCACAGATATACTGGTGACTCCGCTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: LPVFLILPELAT*TTDILVTPLSS
Trigger: AGAGGAGAGCGGAGTCACCAGTATATCTGTGGTCCATGTTGCTAGCTCTGGTAAAATTAAAAATACTGGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAAAACACTTATCTTCATaGCTGGACCCAATGAGAAAG +
Preference number: 3 (lower is better)
Translates to: AGIPSTNNANLDKEENLAKHLSS*LDPMRK
Trigger: CTTTCTCATTGGGTCCAGCAATGAAGATAAGTGTTT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGAGAGAGGCAGTATTATaGCACAGAAGATGTTCTTCA +
Preference number: 3 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKREAVL*HRRCSS
Trigger: TGAAGAACATCTTCTGTGCAATAATACTGCCTCTCT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp CTTTCACCTAATACTGCACAATTTTACAAAGGTTCATCAGACTTTAGGCAGCAAAGCCTTCCTTATACTTaGATGCCCTCTGCTCCCTTA +
Preference number: 3 (lower is better)
Translates to: LSPNTAQFYKGSSDFRQQSLPYT*MPSAPL
Trigger: TAAGGGAGCAGAGGGCATCAAAGTATAAGGAAGGCT...TTGCTGCCTAAAGTCTGATGAACCTTTGTAAAATTGTGCAGTATTAGGTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR-3UTR CAA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATGGGACTGGGCAGACTaGTATGCTCGTGGTATTTTT +
Preference number: 3 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKWDWAD*YARGIF
Trigger: AAAAATACCACGAGCATACAAGTCTGCCCAGTCCCA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGGTATTTCCTGAGAATTaGCTACATTGTGGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKVFPEN*LHCGGK
Trigger: TTTTCCTCCACAATGTAGCAAATTCTCAGGAAATAC...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAGTATTTCCTGAGAATTaGCTACATTGTGGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: AGIPSTNNANLDKEENLAVFPEN*LHCGGK
Trigger: TTTTCCTCCACAATGTAGCAAATTCTCAGGAAATAC...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATAAATTGCCCAACCTTTaGAAGACCAGGCTTGGGAAA +
Preference number: 3 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNKLPNL*KTRLGK
Trigger: TTTCCCAAGCCTGGTCTTCAAAAGGTTGGGCAATTT...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATAATTCAGCTGCCAAATaGCCCAACCTTTTGAAGACC +
Preference number: 3 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNNSAAK*PNLLKT
Trigger: GGTCTTCAAAAGGTTGGGCAATTTGGCAGCTGAATT...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 72 bp ACAGACAAGACTGTTACACCCTTACAAGATGATCAGTaGCGCAGCCACATACTGTCTATACAATTACTCATA +
Preference number: 3 (lower is better)
Translates to: TDKTVTPLQDDQ*RSHILSIQLLI
Trigger: TATGAGTAATTGTATAGACAGTATGTGGCTGCGTCACTGATCATCTTGTAAGGGTGTAACAGTCTTGTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp TTCGTTGCACTTAAGGATTATAGACCACCCACAATAATTCCACAGATTTCTCTTGACTGTGGTTCAAGTTaGGCAGACAGGTTTAAATGT +
Preference number: 3 (lower is better)
Translates to: FVALKDYRPPTIIPQISLDCGSS*ADRFKC
Trigger: ACATTTAAACCTGTCTGCCAAACTTGAACCACAGTC...AAGAGAAATCTGTGGAATTATTGTGGGTGGTCTATAATCCTTAAGTGCAACGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469930.2
3UTR-3UTR CAA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAATGATCAGCCACAAATaGATCTGGTGGTTAGAAGGG +
Preference number: 3 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKMISHK*IWWLEG
Trigger: CCCTTCTAACCACCAGATCAATTTGTGGCTGATCAT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATATTTCTTTCAAGTCCTaGGCTATAGCTTGGTTGGTC +
Preference number: 3 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNISFKS*AIAWLV
Trigger: GACCAACCAAGCTATAGCCAAGGACTTGAAAGAAAT...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp TGGCGTGTAAGTAACTACTTAGACATTTGCATGTCAGCCCTCTTTCACCTAATAAGCATACAGATGGGCTaGCTATTTTTGAACTATACA +
Preference number: 3 (lower is better)
Translates to: WRVSNYLDICMSALFHLISIQMG*LFLNYT
Trigger: TGTATAGTTCAAAAATAGCAAGCCCATCTGTATGCT...TATTAGGTGAAAGAGGGCTGACATGCAAATGTCTAAGTAGTTACTTACACGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646730.1
3UTR TCA 72 bp TTTCAAGTCCTTGGCTATAGCTTGGTTGGTCTGATTTaGTTTGTGTTCCTAAATTCTGAGTCTAGATTCCTG +
Preference number: 3 (lower is better)
Translates to: FQVLGYSLVGLI*FVFLNSESRFL
Trigger: CAGGAATCTAGACTCAGAATTTAGGAACACAAATCAAATCAGACCAACCAAGCTATAGCCAAGGACTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR-3UTR CAA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATAAACACTTATCTTCATaGCTGGACCCAATGAGAAAG +
Preference number: 3 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNKHLSS*LDPMRK
Trigger: CTTTCTCATTGGGTCCAGCAATGAAGATAAGTGTTT...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR TCA 72 bp GACAATACATGGACTTTCTCTTTCAATGGTGAGGAATaGAACAAGATACAAGAACCACAGCATGGAATATGT +
Preference number: 3 (lower is better)
Translates to: DNTWTFSFNGEE*NKIQEPQHGIC
Trigger: ACATATTCCATGCTGTGGTTCTTGTATCTTGTTTCATTCCTCACCATTGAAAGAGAAAGTCCATGTATTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR GCA 72 bp TATATTTCAATTTCCCCTTCTAAGTTAATACATGATTaGTGCCCATCATACAGTACTTCAACCCTAAACTAC +
Preference number: 3 (lower is better)
Translates to: YISISPSKLIHD*CPSYSTSTLNY
Trigger: GTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAACTTAGAAGGGGAAATTGAAATATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTCCGTTGAACAGAGCCTaGCCCGGCTCCGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPPLNRA*PGSAPP
Trigger: TGGCGGCGCGGAGCCGGGCCAGGCTCTGTTCAACGG...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR TCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTGCTCCATGTCCCCGTTaGACAGAGCCTGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPAPCPR*TEPGPA
Trigger: AGCCGGGCCAGGCTCTGTTCAACGGGGACATGGAGC...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR TCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTAGGCGGAGCTTGCAGTaGGCCGAGATCCCGCCACTG +
Preference number: 4 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPRRSLQ*AEIPPL
Trigger: CAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCT...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR CCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTAGCCTCCCGAGTGGCTaGGGCTACAGTTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPSLPSG*GYSCAP
Trigger: TGGTGCACAACTGTAGCCCCAGCCACTCGGGAGGCT...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR CCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTGGACTGGTGAGAATTTaGGGCCCAATAGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPGLVRI*GPIESE
Trigger: CTCGGACTCTATTGGGCCCCAAATTCTCACCAGTCC...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR GCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTTGTAACTCCACACCTTaGAGGTACCACTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPCNSTP*RYHCPL
Trigger: CAGAGGACAGTGGTACCTGCAAGGTGTGGAGTTACA...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR TCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTAGACAAACCTGTGGTTaGTCCTCCATCACCACGAAA +
Preference number: 4 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPRQTCG*SSITTK
Trigger: TTTCGTGGTGATGGAGGATCAACCACAGGTTTGTCT...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR TCA 90 bp AAGGTTCATCAGACTTTAGGCAGCAAGATGAGTCTCTCCTTGGGTGACCACCTGGCTCCATGTCCCCGTTaGACAGAGCCTGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: KVHQTLGSKMSLSLGDHLAPCPR*TEPGPA
Trigger: AGCCGGGCCAGGCTCTGTTCAACGGGGACATGGAGC...CAGGTGGTCACCCAAGGAGAGACTCATCTTGCTGCCTAAAGTCTGATGAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR TCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTAATTGGAATGGATTTTaGAGGAGACGGACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPNWNGF*RRRTGE
Trigger: CTCACCAGTCCGTCTCCTTCAAAATCCATTCCAATT...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR GCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTGGAGTGCATCTAGCTTaGTGGTGTATTCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPGVHLA*WCILHR
Trigger: CCTATGAAGAATACACCAGCAAGCTAGATGCACTCC...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR GCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTTCTGATGACTTCTGGTaGCATCCACAAAATGGATCC +
Preference number: 4 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPSDDFW*HPQNGS
Trigger: GGATCCATTTTGTGGATGGCACCAGAAGTCATCAGA...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR CCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTATAGAGGCGAGAATTTaGGGAAAGAGTGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPIEARI*GKSGLS
Trigger: TGAGAGACCACTCTTTCCCCAAATTCTCGCCTCTAT...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR TCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTCTCCTACTTCATTTTTaGAGGCTTGTAACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPLLLHF*RLVTAE
Trigger: CTCAGCAGTTACAAGCCTTCAAAAATGAAGTAGGAG...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR GCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGATCTGAGGAGGATGTaGAGCAGCTCGCACTCCGCC +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHDLRRM*SSSHSA
Trigger: GGCGGAGTGCGAGCTGCTGCACATCCTCCTCAGATC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCCGTTGAACAGAGCCTaGCCCGGCTCCGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIPLNRA*PGSAPP
Trigger: TGGCGGCGCGGAGCCGGGCCAGGCTCTGTTCAACGG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTCATTCTGATGACTTCTaGTGCCATCCACAAAATGGA +
Preference number: 4 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPHSDDF*CHPQNG
Trigger: TCCATTTTGTGGATGGCACCAGAAGTCATCAGAATG...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGGGACAGGTGAGATCTaGGGAGGATGTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHGTGEI*GGCAAA
Trigger: AGCTGCTGCACATCCTCCTCAGATCTCACCTGTCCC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGCCCCCACAGCGCTTTaGGACAGGATGACTAACGCA +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHAPTAL*DRMTNA
Trigger: TGCGTTAGTCATCCTGTCCCAAAGCGCTGTGGGGGC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTGCTCCATGTCCCCGTTaGACAGAGCCTGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIAPCPR*TEPGPA
Trigger: AGCCGGGCCAGGCTCTGTTCAACGGGGACATGGAGC...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATCTGTGGTTGATCCTCTaGACACTGGGCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHLWLIL*TLGQAQ
Trigger: TTGAGCCTGGCCCAGTGTTCAGAGGATCAACCACAG...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644969.2
CDS-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGAGCAGATGCTGCCATaGTGGTGGCTACTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHEQMLP*WWLLEG
Trigger: GCCTTCAAGTAGCCACCATCATGGCAGCATCTGCTC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATTACAGTGGGGACAGGTaGGATCTGAGGAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHYSGDR*DLRRMC
Trigger: GCACATCCTCCTCAGATCTCACCTGTCCCCACTGTA...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TCCTTATACTTTGATGCCCTCTGCTCCCTTATTACAACCAAGCTGCCTGGAGGCGAGTCTCTCCTTGGGTaGCCACCTGGACTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: SLYFDALCSLITTKLPGGESLLG*PPGLVG
Trigger: ACCTACCAGTCCAGGTGGTCACCCAAGGAGAGACTC...GCCTCCAGGCAGCTTGGTTGTAATAAGGGAGCAGAGGGCATCAAAGTATAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGAGAATGAACTCGGCTaGCCGGGAGAAGCAGATGGT +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHENELG*PGEADG
Trigger: ACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGGCTCCATGTCCCCGTTaGACAGAGCCTGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKAPCPR*TEPGPA
Trigger: AGCCGGGCCAGGCTCTGTTCAACGGGGACATGGAGC...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCGGGCACAGCTTCATTTaGGATCAAGTCTGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPGHSFI*DQVCSP
Trigger: GGGGGAGCAGACTTGATCTCAAATGAAGCTGTGCCC...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGGACTGGTGAGAATTTaGGGCCCAATAGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHGLVRI*GPIESE
Trigger: CTCGGACTCTATTGGGCCCCAAATTCTCACCAGTCC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCGGGTGGATGTACAGTaGGGACAGGTGAGATCTGAG +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPRVDVQ*GQVRSE
Trigger: CTCAGATCTCACCTGTCCCCACTGTACATCCACCCG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCGAGAATGAACTCGGCTaGCCGGGAGAAGCAGATGGT +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPENELG*PGEADG
Trigger: ACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTC...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTCGCACTCCGCCTGGTaGATACAAGGTAACATCCTG +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPSHSAW*IQGNIL
Trigger: CAGGATGTTACCTTGTATTCACCAGGCGGAGTGCGA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGAATGCCTGTGCATGTaGCAAAGCTGCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHECLCM*QSCSKL
Trigger: GAGTTTGCTGCAGCTTTGTCACATGCACAGGCATTC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCATATGTGCTGTACATaGGAACCAGCGGTCACGGTG +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPHMCCT*EPAVTV
Trigger: CACCGTGACCGCTGGTTCTCATGTACAGCACATATG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp TTCGTTGCACTTAAGGATTATAGACCACCCACAATAATTCCACAGATTTCTCTTCCGTTGAACAGAGCCTaGCCCGGCTCCGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: FVALKDYRPPTIIPQISLPLNRA*PGSAPP
Trigger: TGGCGGCGCGGAGCCGGGCCAGGCTCTGTTCAACGG...AAGAGAAATCTGTGGAATTATTGTGGGTGGTCTATAATCCTTAAGTGCAACGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469930.2
CDS-3UTR CCA 90 bp GGCTTTAAGCATACAGATGGGCTTGCTATTTTTGAACTATACAGTAATCTAGGTCCGTTGAACAGAGCCTaGCCCGGCTCCGCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GFKHTDGLAIFELYSNLGPLNRA*PGSAPP
Trigger: TGGCGGCGCGGAGCCGGGCCAGGCTCTGTTCAACGG...ACCTAGATTACTGTATAGTTCAAAAATAGCAAGCCCATCTGTATGCTTAAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCAAGCAGCTGGCGGGTaGATGTACAGTGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIQAAGG*MYSGDR
Trigger: CCTGTCCCCACTGTACATCCACCCGCCAGCTGCTTG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCATTGAGACCTCCACCCTaGCCCCCACAGCGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLALRPPP*PPQRFG
Trigger: CCCAAAGCGCTGTGGGGGCCAGGGTGGAGGTCTCAA...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCAGCGGTCACGGTGCTaGAGAATGAACTCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIQRSRC*RMNSAG
Trigger: GCCAGCCGAGTTCATTCTCCAGCACCGTGACCGCTG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCGAGAACGATGCTTGGTaGTTGAAACTGCCCCATCAG +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPENDAW*LKLPHQ
Trigger: CTGATGGGGCAGTTTCAATCACCAAGCATCGTTCTC...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAGGGCACAGCTTCATTTaGGATCAAGTCTGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGGHSFI*DQVCSP
Trigger: GGGGGAGCAGACTTGATCTCAAATGAAGCTGTGCCC...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATAGAGGAATGTGTGTGTaGGTCGCCATAAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHRGMCV*VAIRFG
Trigger: TCCAAACCTTATGGCGACTCACACACACATTCCTCT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTGTAACTCCACACCTTaGAGGTACCACTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPCNSTP*RYHCPL
Trigger: CAGAGGACAGTGGTACCTGCAAGGTGTGGAGTTACA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTGTCCCGGACCCAGGCTaGACATGTTCTACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIVPDPG*TCSTSS
Trigger: TGAGGAGGTAGAACATGTGCAGCCTGGGTCCGGGAC...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAATGTAGGAGGGGACTaGGAGTCCGGGATTGGTATT +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPNVGGD*ESGIGI
Trigger: AATACCAATCCCGGACTCCCAGTCCCCTCCTACATT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGTTCATCAGACTTTAGGCAGCAAGATGAGTCTCTCCTTGGGTGACCACCTGCACACATTCCTCTCATaGAGAGTAAGCCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: KVHQTLGSKMSLSLGDHLHTFLS*RVSPCH
Trigger: GTGGCAAGGGCTTACTCTCCATGAGAGGAATGTGTG...CAGGTGGTCACCCAAGGAGAGACTCATCTTGCTGCCTAAAGTCTGATGAACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCTTTCTTCCTGGGACTaGGCAGACTTGTATGCTCGT +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPLSSWD*ADLYAR
Trigger: ACGAGCATACAAGTCTGCCCAGTCCCAGGAAGAAAG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGCAGCGGTCACGGTGCTaGAGAATGAACTCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKQRSRC*RMNSAG
Trigger: GCCAGCCGAGTTCATTCTCCAGCACCGTGACCGCTG...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 72 bp GTTCTACCTCCTCAGCAGGACATGAAACACATCCTCTaGTTCAAGCCCAGGTCTCTCTACCTGCGGAAACTT +
Preference number: 4 (lower is better)
Translates to: VLPPQQDMKHIL*FKPRSLYLRKL
Trigger: AAGTTTCCGCAGGTAGAGAGACCTGGGCTTGAACAAGAGGATGTGTTTCATGTCCTGCTGAGGAGGTAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TATTTTTCATTCCTGTATGACATGGATGCCTCTATTTGCATGACCTCTGAGTATGCTCCATGTCCCCGTTaGACAGAGCCTGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: YFSFLYDMDASICMTSEYAPCPR*TEPGPA
Trigger: AGCCGGGCCAGGCTCTGTTCAACGGGGACATGGAGC...ATACTCAGAGGTCATGCAAATAGAGGCATCCATGTCATACAGGAATGAAAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469930.2
CDS-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATAATTGCCCAACCTTTTaGAGACCAGGCTTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHNCPTF*RPGLGK
Trigger: TTTTCCCAAGCCTGGTCTTCAAAAGGTTGGGCAATT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTTACAGTGGGGACAGGTaGGATCTGAGGAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIYSGDR*DLRRMC
Trigger: GCACATCCTCCTCAGATCTCACCTGTCCCCACTGTA...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp AGTGGTGACAGTGCCAAATTACAGCCTTCCTTATACTTTGATGCCCTCTGCTCCTGTAACTCCACACCTTaGAGGTACCACTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SGDSAKLQPSLYFDALCSCNSTP*RYHCPL
Trigger: CAGAGGACAGTGGTACCTGCAAGGTGTGGAGTTACA...GGAGCAGAGGGCATCAAAGTATAAGGAAGGCTGTAATTTGGCACTGTCACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR GCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATTCTGATGACTTCTGGTaGCATCCACAAAATGGATCC +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHSDDFW*HPQNGS
Trigger: GGATCCATTTTGTGGATGGCACCAGAAGTCATCAGA...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTGGCTACTTGAAGGCTaGAAATTCTCCATATCCCCC +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPWLLEG*KFSISP
Trigger: GGGGGATATGGAGAATTTGCAGCCTTCAAGTAGCCA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATAGAAATAAGAGCAGATaGTGCCATGATGGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHRNKSR*CHDGGY
Trigger: GTAGCCACCATCATGGCAGCATCTGCTCTTATTTCT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAGTCCCGGACCCAGGCTaGACATGTTCTACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLAVPDPG*TCSTSS
Trigger: TGAGGAGGTAGAACATGTGCAGCCTGGGTCCGGGAC...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTAGGTTTGCAAGCAGCTaGCGGGTGGATGTACAGTGG +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIRFASS*RVDVQW
Trigger: CCACTGTACATCCACCCGCCAGCTGCTTGCAAACCT...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTGCTACTACCCTCTTCTaGGGCTCAACTACCGATGGG +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIATTLF*GSTTDG
Trigger: CCCATCGGTAGTTGAGCCCCAGAAGAGGGTAGTAGC...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAGTCGCCATAAGGTTTaGAGTGGTGAAACAGGAACC +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPSRHKV*SGETGT
Trigger: GGTTCCTGTTTCACCACTCCAAACCTTATGGCGACT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 72 bp TCTTGTTCAAGCCCAGGTCTCTCTACCTGCGGAAACTaGAAGCCAATCTTGGTAAAGGGAACACAGCCACAT +
Preference number: 4 (lower is better)
Translates to: SCSSPGLSTCGN*KPILVKGTQPH
Trigger: ATGTGGCTGTGTTCCCTTTACCAAGATTGGCTTCAAGTTTCCGCAGGTAGAGAGACCTGGGCTTGAACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 72 bp CAATATGCTAAGCCTGGCTCCTGGGCACAGCTTCATTaGAGATCAAGTCTGCTCCCCCGTTCAAATGAGATA +
Preference number: 4 (lower is better)
Translates to: QYAKPGSWAQLH*RSSLLPRSNEI
Trigger: TATCTCATTTGAACGGGGGAGCAGACTTGATCTCAAATGAAGCTGTGCCCAGGAGCCAGGCTTAGCATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCATGATGGTGGCTACTTaGAGGCTGCAAATTCTCCAT +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPMMVAT*RLQILH
Trigger: ATGGAGAATTTGCAGCCTTCAAGTAGCCACCATCAT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATTCTTTCCATCATGCCTaGCCATCAAAAGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHSFHHA*PSKGQN
Trigger: ATTCTGACCTTTTGATGGTCAGGCATGATGGAAAGA...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAATTGCCCAACCTTTTaGAGACCAGGCTTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPNCPTF*RPGLGK
Trigger: TTTTCCCAAGCCTGGTCTTCAAAAGGTTGGGCAATT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTTACAAGATGATCAGTaGCGCAGCCACATACTGTCT +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPLQDDQ*RSHILS
Trigger: AGACAGTATGTGGCTGCGTCACTGATCATCTTGTAA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTCGGGAACCAGAATTTaGCAGCTAGACAGAATCTTC +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPSGTRI*QLDRIF
Trigger: GAAGATTCTGTCTAGCTGTCAAATTCTGGTTCCCGA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATAAATACAATCAGGGGTaGGATATTCGGGAACCAGAA +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHKYNQG*DIREPE
Trigger: TTCTGGTTCCCGAATATCTCACCCCTGATTGTATTT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTTCGCACTCCGCCTGGTaGATACAAGGTAACATCCTG +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNISHSAW*IQGNIL
Trigger: CAGGATGTTACCTTGTATTCACCAGGCGGAGTGCGA...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATCACCATTTCAACTCATaGCCTGTAAGCTATTTGCTG +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHHHFNS*PVSYLL
Trigger: CAGCAAATAGCTTACAGGTCATGAGTTGAAATGGTG...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGCGCTTTGGGACAGGATaGCTAACGCAGTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKRFGTG*LTQSSF
Trigger: GAAGCTGGACTGCGTTAGTCATCCTGTCCCAAAGCG...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATCACGGTGCTGGAGAATaGACTCGGCTGGCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNHGAGE*TRLAGR
Trigger: TCTCCCGGCCAGCCGAGTTCATTCTCCAGCACCGTG...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TCCTTATACTTTGATGCCCTCTGCTCCCTTATTACAACCAAGCTGCCTGGAGGCTTGGGTCTTTCCTCTTaGGCTGGTAAAATTCACCCA +
Preference number: 4 (lower is better)
Translates to: SLYFDALCSLITTKLPGGLGLSS*AGKIHP
Trigger: TGGGTGAATTTTACCAGCTCAAGAGGAAAGACCCAA...GCCTCCAGGCAGCTTGGTTGTAATAAGGGAGCAGAGGGCATCAAAGTATAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR GCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCATGCCACGGCATTTTGTaGCCTGGACAAAGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLACHGIL*PGQSSR
Trigger: GCGGCTACTTTGTCCAGGGCACAAAATGCCGTGGCA...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCGGTTTAGTTAGATACTaGCACGGCATTTTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPGLVRY*HGILCP
Trigger: AGGGCACAAAATGCCGTGGCAGTATCTAACTAAACC...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGAACCAGCGGTCACGGTaGTGGAGAATGAACTCGGCT +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKNQRSR*WRMNSA
Trigger: AGCCGAGTTCATTCTCCAGCACCGTGACCGCTGGTT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATTGTTCTCTACATCTGTaGCTACTCTGTGAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHCSLHL*LLCELC
Trigger: ACAAAGCTCACAGAGTAGGCACAGATGTAGAGAACA...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp GTGACAGTGCCAAATTACAGCCTTCCTTATACTTTGATGCCCTCTGCTCCCTTACTTCGAATCTTTCCATaGCCTGTGCAGTCTGTCGTG +
Preference number: 4 (lower is better)
Translates to: VTVPNYSLPYTLMPSAPLLRIFP*PVQSVV
Trigger: CACGACAGACTGCACAGGGCATGGAAAGATTCGAAG...TAAGGGAGCAGAGGGCATCAAAGTATAAGGAAGGCTGTAATTTGGCACTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CCA 90 bp ATTTATTTTAAACTAGTGCTTAGACATGACTGTGGTTCAAGTTTGGCAGACAGGACACCTCCTCCGGAATaGCAGGGTCCGCAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: IYFKLVLRHDCGSSLADRTPPPE*QGPQPK
Trigger: CTTCGGCTGCGGACCCTGCCATTCCGGAGGAGGTGT...CCTGTCTGCCAAACTTGAACCACAGTCATGTCTAAGCACTAGTTTAAAATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469930.2
CDS-3UTR CCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATCATTCTGATGACTTCTaGTGCCATCCACAAAATGGA +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHHSDDF*CHPQNG
Trigger: TCCATTTTGTGGATGGCACCAGAAGTCATCAGAATG...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCATAGAGGCGAGAATTTaGGGAAAGAGTGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPIEARI*GKSGLS
Trigger: TGAGAGACCACTCTTTCCCCAAATTCTCGCCTCTAT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTGCTAAGCCTGGCTCCTaGGCACAGCTTCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIAKPGS*AQLHLR
Trigger: TCTCAAATGAAGCTGTGCCCAGGAGCCAGGCTTAGC...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACGGGTGGATGTACAGTaGGGACAGGTGAGATCTGAG +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLARVDVQ*GQVRSE
Trigger: CTCAGATCTCACCTGTCCCCACTGTACATCCACCCG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATCTGAACCCTGCAATGTaGTTTCGAACTAAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHLNPAM*FRTKAR
Trigger: TCTAGCTTTAGTTCGAAACCACATTGCAGGGTTCAG...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAGCTACTACCCTCTTCTaGGGCTCAACTACCGATGGG +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLAATTLF*GSTTDG
Trigger: CCCATCGGTAGTTGAGCCCCAGAAGAGGGTAGTAGC...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTCTATATATGTGGCATaGCCAAAGGAAACACGGAGG +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPSIYVA*PKETRR
Trigger: CCTCCGTGTTTCCTTTGGCCATGCCACATATATAGA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp AGTGGTGACAGTGCCAAATTACAGCCTTCCTTATACTTTGATGCCCTCTGCTCCAATTGGAATGGATTTTaGAGGAGACGGACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SGDSAKLQPSLYFDALCSNWNGF*RRRTGE
Trigger: CTCACCAGTCCGTCTCCTTCAAAATCCATTCCAATT...GGAGCAGAGGGCATCAAAGTATAAGGAAGGCTGTAATTTGGCACTGTCACCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR TCA 90 bp TCCTTATACTTTGATGCCCTCTGCTCCCTTATTACAACCAAGCTGCCTGGAGGCCTCCTACTTCATTTTTaGAGGCTTGTAACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SLYFDALCSLITTKLPGGLLLHF*RLVTAE
Trigger: CTCAGCAGTTACAAGCCTTCAAAAATGAAGTAGGAG...GCCTCCAGGCAGCTTGGTTGTAATAAGGGAGCAGAGGGCATCAAAGTATAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATAACCTTTTCAATGCTTaGGTGGAACTGAAGTGTACT +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHNLFNA*VELKCT
Trigger: AGTACACTTCAGTTCCACTCAAGCATTGAAAAGGTT...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GTGACAGTGCCAAATTACAGCCTTCCTTATACTTTGATGCCCTCTGCTCCCTTATCTAGGTGGAATCCCTaGTGTCACTTTCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: VTVPNYSLPYTLMPSAPLSRWNP*CHFLWV
Trigger: GACCCAAAGAAAGTGACATCAGGGATTCCACCTAGA...TAAGGGAGCAGAGGGCATCAAAGTATAAGGAAGGCTGTAATTTGGCACTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR GCA 90 bp AGTGGTGACAGTGCCAAATTACAGCCTTCCTTATACTTTGATGCCCTCTGCTCCGGAGTGCATCTAGCTTaGTGGTGTATTCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: SGDSAKLQPSLYFDALCSGVHLA*WCILHR
Trigger: CCTATGAAGAATACACCAGCAAGCTAGATGCACTCC...GGAGCAGAGGGCATCAAAGTATAAGGAAGGCTGTAATTTGGCACTGTCACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR GCA 90 bp AGTGGTGACAGTGCCAAATTACAGCCTTCCTTATACTTTGATGCCCTCTGCTCCTCTGATGACTTCTGGTaGCATCCACAAAATGGATCC +
Preference number: 4 (lower is better)
Translates to: SGDSAKLQPSLYFDALCSSDDFW*HPQNGS
Trigger: GGATCCATTTTGTGGATGGCACCAGAAGTCATCAGA...GGAGCAGAGGGCATCAAAGTATAAGGAAGGCTGTAATTTGGCACTGTCACCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR GCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCCAGGTCTCTCTACCTaGGGAAACTTGAAGCCAATC +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIPGLST*GNLKPI
Trigger: GATTGGCTTCAAGTTTCCGCAGGTAGAGAGACCTGG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATGATCTGAGGAGGATGTaGAGCAGCTCGCACTCCGCC +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNDLRRM*SSSHSA
Trigger: GGCGGAGTGCGAGCTGCTGCACATCCTCCTCAGATC...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCAGTCCAGCTTCATGTaGAATCAAGTCCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIQSSFM*NQVPGR
Trigger: TCTTCCCGGGACTTGATTGCACATGAAGCTGGACTG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACCAGGTCATAAAGGATaGCTTGAGACCTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLAPGHKG*LETSTL
Trigger: CAGGGTGGAGGTCTCAAGGCATCCTTTATGACCTGG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTGTTCTCTACATCTGTaGCTACTCTGTGAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPCSLHL*LLCELC
Trigger: ACAAAGCTCACAGAGTAGGCACAGATGTAGAGAACA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGGCAGCAGAGAATTCTaGTTCCTAAAACATTCTTTC +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHGSREF*FLKHSF
Trigger: GAAAGAATGTTTTAGGAACCAGAATTCTCTGCTGCC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAGCCACAAATTGATCTaGTGGTTAGAAGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPSHKLI*WLEGQS
Trigger: ACTTTGCCCTTCTAACCACCAGATCAATTTGTGGCT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAGCTAAGCCTGGCTCCTaGGCACAGCTTCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLAAKPGS*AQLHLR
Trigger: TCTCAAATGAAGCTGTGCCCAGGAGCCAGGCTTAGC...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 72 bp CAGCCACAAATTGATCTGGTGGTTAGAAGGGCAAAGTaGACTGGCAGACTTTCCATAGCAAATCTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: QPQIDLVVRRAK*TGRLSIANLPS
Trigger: GCTTGGGAGATTTGCTATGGAAAGTCTGCCAGTCAACTTTGCCCTTCTAACCACCAGATCAATTTGTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 72 bp TTTTGTGGGGGTTTAGTTAGATACTGCCACGGCATTTaGTGCCCTGGACAAAGTAGCCGCATAAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: FCGGLVRYCHGI*CPGQSSRISSW
Trigger: CCAACTACTTATGCGGCTACTTTGTCCAGGGCACAAAATGCCGTGGCAGTATCTAACTAAACCCCCACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTAGACAAACCTGTGGTTaGTCCTCCATCACCACGAAA +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIRQTCG*SSITTK
Trigger: TTTCGTGGTGATGGAGGATCAACCACAGGTTTGTCT...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496384.7
CDS-3UTR TCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATTTCTTCAAATCAGCGTaGATTATTTCCACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHFFKSA*IISTFA
Trigger: TGCAAAGGTGGAAATAATTCACGCTGATTTGAAGAA...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTTTTGTAGAGGTCACCTaGACCCTGCAATGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIFVEVT*TLQCGF
Trigger: GAAACCACATTGCAGGGTTCAGGTGACCTCTACAAA...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCTACAAATCATCACCTaGGGCAGAGATGCTACTACC +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNILQIIT*GRDATT
Trigger: GGTAGTAGCATCTCTGCCTCAGGTGATGATTTGTAG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAAATAAGAGCAGATGCTaGCATGATGGTGGCTACTTG +
Preference number: 4 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGNKSRC*HDGGYL
Trigger: CAAGTAGCCACCATCATGGCAGCATCTGCTCTTATT...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAGTTTCTTTCCATCATaGCTGACCATCAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPSFFPS*LTIKRS
Trigger: TGACCTTTTGATGGTCAGGCATGATGGAAAGAAACT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGAGGTCAGGAAGAAGATaGAGCATGCCCTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKRSGRR*SMPFSS
Trigger: GGAGGAAAAGGGCATGCTGCATCTTCTTCCTGACCT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGCCAGGTCTCTCTACCTaGGGAAACTTGAAGCCAATC +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKPGLST*GNLKPI
Trigger: GATTGGCTTCAAGTTTCCGCAGGTAGAGAGACCTGG...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAACATTTCAAGGATGTaGTGGAGACAATACATGGAC +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPNISRM*WRQYMD
Trigger: GTCCATGTATTGTCTCCAGCACATCCTTGAAATGTT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTAGTCACTCATTGAGTTaGCGACTAATTGCCCCATGC +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNISHSLS*RLIAPC
Trigger: GCATGGGGCAATTAGTCGGCAACTCAATGAGTGACT...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAAGGAAAGGCAGCAATTaGCATGTTGAGGAAAGGATC +
Preference number: 4 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGRKGSN*HVEERI
Trigger: GATCCTTTCCTCAACATGGCAATTGCTGCCTTTCCT...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp AAGGTTCATCAGACTTTAGGCAGCAAGATGAGTCTCTCCTTGGGTGACCACCTGTTATTACAACCAAGCTaGCTGGAGGCTTTAAGCATA +
Preference number: 4 (lower is better)
Translates to: KVHQTLGSKMSLSLGDHLLLQPS*LEALSI
Trigger: TATGCTTAAAGCCTCCAGGCAGCTTGGTTGTAATAA...CAGGTGGTCACCCAAGGAGAGACTCATCTTGCTGCCTAAAGTCTGATGAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CCA 90 bp AGTGGTGACAGTGCCAAATTACAGCCTTCCTTATACTTTGATGCCCTCTGCTCCTTTATTATACTCCCATaGAGGACAAAGCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: SGDSAKLQPSLYFDALCSFIILP*RTKHLV
Trigger: GACCAGGTGCTTTGTCCTCCATGGGAGTATAATAAA...GGAGCAGAGGGCATCAAAGTATAAGGAAGGCTGTAATTTGGCACTGTCACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTCCTCTTTTGTTGGATaGGAAATTCCATTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPSSFVG*EIPFCS
Trigger: GGAACAGAATGGAATTTCCCATCCAACAAAAGAGGA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCGGCAGCAGAGAATTCTaGTTCCTAAAACATTCTTTC +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPGSREF*FLKHSF
Trigger: GAAAGAATGTTTTAGGAACCAGAATTCTCTGCTGCC...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTTGTTGAAGAAACACTaGCAGCAGAGAATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPLLKKH*QQRILV
Trigger: AACCAGAATTCTCTGCTGCCAGTGTTTCTTCAACAA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGCTTTCTTCCTGGGACTaGGCAGACTTGTATGCTCGT +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKLSSWD*ADLYAR
Trigger: ACGAGCATACAAGTCTGCCCAGTCCCAGGAAGAAAG...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTTCTCCTCTTTCTTCCTaGGACTGGGCAGACTTGTAT +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNISPLSS*DWADLY
Trigger: ATACAAGTCTGCCCAGTCCCAGGAAGAAAGAGGAGA...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCGCAAAGATGTTAGTGTaGATCCAGCAAGTACCATTA +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPAKMLV*IQQVPL
Trigger: TAATGGTACTTGCTGGATCCACACTAACATCTTTGC...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCCAGAGCTAGCAACATaGACCACAGATATACTGGTG +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIPELAT*TTDILV
Trigger: CACCAGTATATCTGTGGTCCATGTTGCTAGCTCTGG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGATACACTGGCTTACATTaGCTGTGTCCTCATACACAC +
Preference number: 4 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGYTGLH*LCPHTH
Trigger: GTGTGTATGAGGACACAGCCAATGTAAGCCAGTGTA...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCCACCAAAACACACGTaGGTTCAAAAACTTAACACA +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPPPKHT*VQKLNT
Trigger: TGTGTTAAGTTTTTGAACCCACGTGTGTTTTGGTGG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 72 bp CCAGGTCTCTCTACCTGCGGAAACTTGAAGCCAATCTaGGTAAAGGGAACACAGCCACATTTAAAAGCATCT +
Preference number: 4 (lower is better)
Translates to: PGLSTCGNLKPI*VKGTQPHLKAS
Trigger: AGATGCTTTTAAATGTGGCTGTGTTCCCTTTACCAAGATTGGCTTCAAGTTTCCGCAGGTAGAGAGACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTAATTGGAATGGATTTTaGAGGAGACGGACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNINWNGF*RRRTGE
Trigger: CTCACCAGTCCGTCTCCTTCAAAATCCATTCCAATT...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGATCGTGGTATTTTTGTTaGAGAAACACTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGSWYFC*RNTGSR
Trigger: TCTGCTGCCAGTGTTTCTTCAACAAAAATACCACGA...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTAAGGAAGAAGGAGAATaGATGGAGACGCCACCATTT +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIKEEGE*METPPF
Trigger: AAATGGTGGCGTCTCCATTCATTCTCCTTCTTCCTT...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACTCCTCAGCAGGACATaGAACACATCCTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLALLSRT*NTSSCS
Trigger: TGAACAAGAGGATGTGTTTCATGTCCTGCTGAGGAG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTTTACAAGATGATCAGTaGCGCAGCCACATACTGTCT +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNILQDDQ*RSHILS
Trigger: AGACAGTATGTGGCTGCGTCACTGATCATCTTGTAA...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCATACACCCTTACAAGATaGTCAGTGACGCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLAYTLTR*SVTQPH
Trigger: ATGTGGCTGCGTCACTGATCATCTTGTAAGGGTGTA...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAAAATACAATCAGGGGTaGGATATTCGGGAACCAGAA +
Preference number: 4 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGKYNQG*DIREPE
Trigger: TTCTGGTTCCCGAATATCTCACCCCTGATTGTATTT...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGTGGGTGGTCTTTCTATaGATGCCTGTGCATGTGACA +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKWVVFL*MPVHVT
Trigger: TGTCACATGCACAGGCATTCATAGAAAGACCACCCA...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGCTACAAATCATCACCTaGGGCAGAGATGCTACTACC +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKLQIIT*GRDATT
Trigger: GGTAGTAGCATCTCTGCCTCAGGTGATGATTTGTAG...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGATATGCTAGTTTGCAGTaGCTTCCAACTCATACTCCA +
Preference number: 4 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGYASLQ*LPTHTP
Trigger: TGGAGTATGAGTTGGAAGTCACTGCAAACTAGCATA...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAAGAGGAATGTGTGTGTaGGTCGCCATAAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLARGMCV*VAIRFG
Trigger: TCCAAACCTTATGGCGACTCACACACACATTCCTCT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTATGCTTGAGTGGAACTaGAGTGTACTAAACCCGAAC +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIMLEWN*SVLNPN
Trigger: GTTCGGGTTTAGTACACTTCAGTTCCACTCAAGCAT...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTGGAGTGCATCTAGCTTaGTGGTGTATTCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIGVHLA*WCILHR
Trigger: CCTATGAAGAATACACCAGCAAGCTAGATGCACTCC...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCAGGAAAGAGAACGATaGTTGGTGATTGAAACTGCC +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIQERER*LVIETA
Trigger: GGCAGTTTCAATCACCAAGCATCGTTCTCTTTCCTG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGAAAGAAGGCAATGTGTaGCAGCACTATCTAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKKEGNV*QHYLAC
Trigger: GCAGGCTAGATAGTGCTGGCACACATTGCCTTCTTT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAAAAGAAGGCAATGTGTaGCAGCACTATCTAGCCTGC +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLAKEGNV*QHYLAC
Trigger: GCAGGCTAGATAGTGCTGGCACACATTGCCTTCTTT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATGCTAGAGATGAGGTTTaGAAGCAGCTGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNARDEV*KQLAGG
Trigger: TCCACCCGCCAGCTGCTTGCAAACCTCATCTCTAGC...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACTAATGGTTGGAATCTaGTCGTCTCAAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLALMVGI*SSQGAG
Trigger: ACCAGCACCTTGAGACGAGCAGATTCCAACCATTAG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATCACCTGAGGCAGAGATaGTACTACCCTCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNHLRQR*YYPLLG
Trigger: CCCCAGAAGAGGGTAGTAGCATCTCTGCCTCAGGTG...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATAACCAGCGGTCACGGTaGTGGAGAATGAACTCGGCT +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNNQRSR*WRMNSA
Trigger: AGCCGAGTTCATTCTCCAGCACCGTGACCGCTGGTT...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAAACAGACCCTTCCTTTaGGGCATCTCTTCACAAATT +
Preference number: 4 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGNRPFL*GISSQI
Trigger: AATTTGTGAAGAGATGCCGCAAAGGAAGGGTCTGTT...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATTTGTTTATGCTAGTTTaGAGTGACTTCCAACTCATA +
Preference number: 4 (lower is better)
Translates to: VLENELGWPGEADGLYKHLFMLV*SDFQLI
Trigger: TATGAGTTGGAAGTCACTGCAAACTAGCATAAACAA...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCAAACACTATTTCACTaGGGACAGAATGTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIQTLFH*GQNVGG
Trigger: CCCTCCTACATTCTGTCCCCAGTGAAATAGTGTTTG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644969.2
CDS-3UTR CCA 90 bp AAGGTTCATCAGACTTTAGGCAGCAAGATGAGTCTCTCCTTGGGTGACCACCTGAAATTATCCTTCTGTTaGTCACACATTCCTCTCATG +
Preference number: 4 (lower is better)
Translates to: KVHQTLGSKMSLSLGDHLKLSFC*SHIPLM
Trigger: CATGAGAGGAATGTGTGACCAACAGAAGGATAATTT...CAGGTGGTCACCCAAGGAGAGACTCATCTTGCTGCCTAAAGTCTGATGAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGCCCTCAGAAACTAACTaGTGGTCACTAGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKPSETN*WSLGER
Trigger: TCTTTCCCCTAGTGACCACCAGTTAGTTTCTGAGGG...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACCCCTAAACCGGTTCTaGCACCACTTTCAACAACAT +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLAPLNRF*HHFQQH
Trigger: ATGTTGTTGAAAGTGGTGCCAGAACCGGTTTAGGGG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGACCCTCTTAGCTGGGTaGTCTTTCTATGAATGCCTG +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKTLLAG*SFYECL
Trigger: CAGGCATTCATAGAAAGACCACCCAGCTAAGAGGGT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCACCTCACCCCATTTTaGTCTCTGTTCTCTACATCT +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIHLTPF*SLFSTS
Trigger: AGATGTAGAGAACAGAGACCAAAATGGGGTGAGGTG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAAGTCGCCATAAGGTTTaGAGTGGTGAAACAGGAACC +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLASRHKV*SGETGT
Trigger: GGTTCCTGTTTCACCACTCCAAACCTTATGGCGACT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 72 bp TGTTGGTCACACATTCCTCTCATGGAGAGTAAGCCCTaGCCACATCATTTATTATACTCCCATGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: CWSHIPLMESKP*PHHLLYSHGGQ
Trigger: TTGTCCTCCATGGGAGTATAATAAATGATGTGGCAAGGGCTTACTCTCCATGAGAGGAATGTGTGACCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR TCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGAATTGGAATGGATTTTaGAGGAGACGGACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKNWNGF*RRRTGE
Trigger: CTCACCAGTCCGTCTCCTTCAAAATCCATTCCAATT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TGGCGTGTAAGTAACTACTTAGACATTTGCATGTCAGCCCTCTTTCACCTAATAAGACAAACCTGTGGTTaGTCCTCCATCACCACGAAA +
Preference number: 4 (lower is better)
Translates to: WRVSNYLDICMSALFHLIRQTCG*SSITTK
Trigger: TTTCGTGGTGATGGAGGATCAACCACAGGTTTGTCT...TATTAGGTGAAAGAGGGCTGACATGCAAATGTCTAAGTAGTTACTTACACGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAGAGCAGATGCTGCCATaGTGGTGGCTACTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKEQMLP*WWLLEG
Trigger: GCCTTCAAGTAGCCACCATCATGGCAGCATCTGCTC...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCATCAAGGTTAAGATTCTaGAACGTACCCCTAAACCGG +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLASRLRF*NVPLNR
Trigger: CCGGTTTAGGGGTACGTTTCAGAATCTTAACCTTGA...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACGCTTTGGGACAGGATaGCTAACGCAGTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKRFGTG*LTQSSF
Trigger: GAAGCTGGACTGCGTTAGTCATCCTGTCCCAAAGCG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAGTGAAACAGGAACCGTaGATTCACTGCAGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLAVKQEP*IHCSSN
Trigger: GTTTGAACTGCAGTGAATTCACGGTTCCTGTTTCAC...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGATGCTTGAGTGGAACTaGAGTGTACTAAACCCGAAC +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKMLEWN*SVLNPN
Trigger: GTTCGGGTTTAGTACACTTCAGTTCCACTCAAGCAT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAAGTTTCTTTCCATCATaGCTGACCATCAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGSFFPS*LTIKRS
Trigger: TGACCTTTTGATGGTCAGGCATGATGGAAAGAAACT...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGGAAGAAGATGCAGCATaGCCTTTTCCTCCATACCAA +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKEEDAA*PFPPYQ
Trigger: TTGGTATGGAGGAAAAGGGCATGCTGCATCTTCTTC...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGGTCTGGGAATTCAGCTaGCAAATTGCCCAACCTTTT +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKVWEFS*QIAQPF
Trigger: AAAAGGTTGGGCAATTTGGCAGCTGAATTCCCAGAC...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTCACTGAACTATATTTaGAACCTAGTTGCTCTATGT +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPSLNYI*NLVALC
Trigger: ACATAGAGCAACTAGGTTGCAAATATAGTTCAGTGA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAAGTTAATACATGATTaGTGCCCATCATACAGTACT +
Preference number: 4 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPKLIHD*CPSYST
Trigger: AGTACTGTATGATGGGCAGCAATCATGTATTAACTT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATCCAGGTCATAAAGGATaGCTTGAGACCTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNPGHKG*LETSTL
Trigger: CAGGGTGGAGGTCTCAAGGCATCCTTTATGACCTGG...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGATCTTCACAAATTTTCTaGCAACTCTCCCGCATATGT +
Preference number: 4 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGSSQIF*QLSRIC
Trigger: ACATATGCGGGAGAGTTGGCAGAAAATTTGTGAAGA...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGAGGAAAGGCAGCAATTaGCATGTTGAGGAAAGGATC +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKRKGSN*HVEERI
Trigger: GATCCTTTCCTCAACATGGCAATTGCTGCCTTTCCT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp GTGACAGTGCCAAATTACAGCCTTCCTTATACTTTGATGCCCTCTGCTCCCTTAAACTACTTAGACATTTaGATGTCAGCCCTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: VTVPNYSLPYTLMPSAPLNYLDI*MSALFH
Trigger: GTGAAAGAGGGCTGACATGCAAATGTCTAAGTAGTT...TAAGGGAGCAGAGGGCATCAAAGTATAAGGAAGGCTGTAATTTGGCACTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CCA 90 bp GGCTTTAAGCATACAGATGGGCTTGCTATTTTTGAACTATACAGTAATCTAGGTGGACTGGTGAGAATTTaGGGCCCAATAGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: GFKHTDGLAIFELYSNLGGLVRI*GPIESE
Trigger: CTCGGACTCTATTGGGCCCCAAATTCTCACCAGTCC...ACCTAGATTACTGTATAGTTCAAAAATAGCAAGCCCATCTGTATGCTTAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATAGACAGCGCATCAGCTaGTTCAAAGGGGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNRQRIS*FKGAPS
Trigger: TGATGGAGCCCCTTTGAACCAGCTGATGCGCTGTCT...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644969.2
CDS-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACTGGGAGTCCGGGATTaGTATTTCCGAAGACAGCGC +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKLGVRD*YFRRQR
Trigger: GCGCTGTCTTCGGAAATACCAATCCCGGACTCCCAG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644969.2
CDS-3UTR CCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAATAGAGGCGAGAATTTaGGGAAAGAGTGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLAIEARI*GKSGLS
Trigger: TGAGAGACCACTCTTTCCCCAAATTCTCGCCTCTAT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp TGGCGTGTAAGTAACTACTTAGACATTTGCATGTCAGCCCTCTTTCACCTAATAGGAGGACAAAGCACCTaGTCCCTGTTGTTGATGTTT +
Preference number: 4 (lower is better)
Translates to: WRVSNYLDICMSALFHLIGGQST*SLLLMF
Trigger: AAACATCAACAACAGGGACCAGGTGCTTTGTCCTCC...TATTAGGTGAAAGAGGGCTGACATGCAAATGTCTAAGTAGTTACTTACACGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGTCAGAAACTAACTGGTaGTCACTAGGGGAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKSETNW*SLGERA
Trigger: AGCTCTTTCCCCTAGTGACCACCAGTTAGTTTCTGA...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGAATCAGTGTCTAGGTTaGCAGCAGTACTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKNQCLG*QQYSGN
Trigger: GTTTCCAGAGTACTGCTGCCAACCTAGACACTGATT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAAATCAGTGTCTAGGTTaGCAGCAGTACTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLANQCLG*QQYSGN
Trigger: GTTTCCAGAGTACTGCTGCCAACCTAGACACTGATT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGTCTATATATGTGGCATaGCCAAAGGAAACACGGAGG +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKSIYVA*PKETRR
Trigger: CCTCCGTGTTTCCTTTGGCCATGCCACATATATAGA...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCTGAGTCTATATATGTaGCATGGCCAAAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNILSLYM*HGQRKH
Trigger: GTGTTTCCTTTGGCCATGCCACATATATAGACTCAG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAAGACAAACCTGTGGTTaGTCCTCTGAACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKRQTCG*SSEHWA
Trigger: GGCCCAGTGTTCAGAGGATCAACCACAGGTTTGTCT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644969.2
CDS-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACTCCTACTTCATTTTTaGAGGCTTGTAACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLALLLHF*RLVTAE
Trigger: CTCAGCAGTTACAAGCCTTCAAAAATGAAGTAGGAG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATGAGAACGATGCTTGGTaGTTGAAACTGCCCCATCAG +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNENDAW*LKLPHQ
Trigger: CTGATGGGGCAGTTTCAATCACCAAGCATCGTTCTC...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAAGACAGACCCCTCAGTaGGCAAGGAAACAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKRQTPQ*ARKQKA
Trigger: GGCCTTTTGTTTCCTTGCTCACTGAGGGGTCTGTCT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCCCTTTAGGACAAAATaGGAGTGCTCAAATACAAGT +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIPFRTK*ECSNTS
Trigger: ACTTGTATTTGAGCACTCTCATTTTGTCCTAAAGGG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAAAAAGTTCCATGCTTTaGAGAGCCTATGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLAKSSML*RAYGSR
Trigger: TCTACTCCCATAGGCTCTTCAAAGCATGGAACTTTT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTAACCTTTTCAATGCTTaGGTGGAACTGAAGTGTACT +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNINLFNA*VELKCT
Trigger: AGTACACTTCAGTTCCACTCAAGCATTGAAAAGGTT...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGTTAAACCAGAGTGGCTaGTCTCTTCACAAATCACTG +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKLNQSG*SLHKSL
Trigger: CAGTGATTTGTGAAGAGAGCAGCCACTCTGGTTTAA...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGATGTATAAAAGTTCCATaGTTTGAAGAGCCTATGGGA +
Preference number: 4 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGCIKVP*FEEPMG
Trigger: TCCCATAGGCTCTTCAAAGCATGGAACTTTTATACA...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTAACATTTCAAGGATGTaGTGGAGACAATACATGGAC +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNINISRM*WRQYMD
Trigger: GTCCATGTATTGTCTCCAGCACATCCTTGAAATGTT...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTTCTTCACAAATTTTCTaGCAACTCTCCCGCATATGT +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNISSQIF*QLSRIC
Trigger: ACATATGCGGGAGAGTTGGCAGAAAATTTGTGAAGA...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGCGAGAACCTTTTCAATaGTTGAGTGGAACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKREPFQ*LSGTEV
Trigger: CACTTCAGTTCCACTCAAGCATTGAAAAGGTTCTCG...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACGAGAACCTTTTCAATaGTTGAGTGGAACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLAREPFQ*LSGTEV
Trigger: CACTTCAGTTCCACTCAAGCATTGAAAAGGTTCTCG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGCATTCTGATGACTTCTaGTGCCATCCACAAAATGGA +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKHSDDF*CHPQNG
Trigger: TCCATTTTGTGGATGGCACCAGAAGTCATCAGAATG...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp TGGCGTGTAAGTAACTACTTAGACATTTGCATGTCAGCCCTCTTTCACCTAATAATAGAGGCGAGAATTTaGGGAAAGAGTGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: WRVSNYLDICMSALFHLIIEARI*GKSGLS
Trigger: TGAGAGACCACTCTTTCCCCAAATTCTCGCCTCTAT...TATTAGGTGAAAGAGGGCTGACATGCAAATGTCTAAGTAGTTACTTACACGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAAGCCACAAATTGATCTaGTGGTTAGAAGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLASHKLI*WLEGQS
Trigger: ACTTTGCCCTTCTAACCACCAGATCAATTTGTGGCT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTATAGACAGCAGGGCCTaGAGTTACAATCTGAAATTT +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIIDSRA*SYNLKF
Trigger: AAATTTCAGATTGTAACTCCAGGCCCTGCTGTCTAT...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATGACTCCGCTCTCCTCTaGCCAAGCTACAAATCATCA +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNDSALL*PSYKSS
Trigger: TGATGATTTGTAGCTTGGCCAGAGGAGAGCGGAGTC...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp GGCTTTAAGCATACAGATGGGCTTGCTATTTTTGAACTATACAGTAATCTAGGTCCTTGGGTGACCACCTaGACTGGTAGGTATGATAGT +
Preference number: 4 (lower is better)
Translates to: GFKHTDGLAIFELYSNLGPWVTT*TGRYDS
Trigger: ACTATCATACCTACCAGTCCAGGTGGTCACCCAAGG...ACCTAGATTACTGTATAGTTCAAAAATAGCAAGCCCATCTGTATGCTTAAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACGCATAAGTAGTTGGTaGCTGGAAGAGCATAGGAGG +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKRISSW*LEEHRR
Trigger: CCTCCTATGCTCTTCCAGTCACCAACTACTTATGCG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATCTCCTCAGCAGGACATaGAACACATCCTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNLLSRT*NTSSCS
Trigger: TGAACAAGAGGATGTGTTTCATGTCCTGCTGAGGAG...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATTTTGTAGAGGTCACCTaGACCCTGCAATGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNFVEVT*TLQCGF
Trigger: GAAACCACATTGCAGGGTTCAGGTGACCTCTACAAA...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CTTAGACATGACTGTGGTTCAAGTTTGGCAGACAGGTTTAAATGTCAAATCCAAGGAGTGCATCTAGCTTaGTGGTGTATTCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: LRHDCGSSLADRFKCQIQGVHLA*WCILHR
Trigger: CCTATGAAGAATACACCAGCAAGCTAGATGCACTCC...TTGGATTTGACATTTAAACCTGTCTGCCAAACTTGAACCACAGTCATGTCTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469930.2
CDS-3UTR GCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGACAGCCTATTCTAAAATaGAAGGGAAGAAAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGQPILK*KGRKSV
Trigger: TACACTTTTTCTTCCCTTGCATTTTAGAATAGGCTG...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATCACTACAGAAGGCACTaGAGCCACTTTACAGACAAG +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNHYRRH*SHFTDK
Trigger: CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTG...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGATTAATACATGATTGCTaGCCATCATACAGTACTTCA +
Preference number: 4 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGLIHDC*PSYSTS
Trigger: TGAAGTACTGTATGATGGGCAGCAATCATGTATTAA...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACAGTCCAGCTTCATGTaGAATCAAGTCCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKQSSFM*NQVPGR
Trigger: TCTTCCCGGGACTTGATTGCACATGAAGCTGGACTG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGATTGTTTATGCTAGTTTaGAGTGACTTCCAACTCATA +
Preference number: 4 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGLFMLV*SDFQLI
Trigger: TATGAGTTGGAAGTCACTGCAAACTAGCATAAACAA...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAGCAAAGATGTTAGTGTaGATCCAGCAAGTACCATTA +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLAAKMLV*IQQVPL
Trigger: TAATGGTACTTGCTGGATCCACACTAACATCTTTGC...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTATTTCAAGGATGTGCTaGAGACAATACATGGACTTT +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIISRMC*RQYMDF
Trigger: AAAGTCCATGTATTGTCTCCAGCACATCCTTGAAAT...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TTCGTTGCACTTAAGGATTATAGACCACCCACAATAATTCCACAGATTTCTCTTCTCAAGGGTGAAGAATaGGTCTTACCTGACACACAT +
Preference number: 4 (lower is better)
Translates to: FVALKDYRPPTIIPQISLLKGEE*VLPDTH
Trigger: ATGTGTGTCAGGTAAGACTCATTCTTCACCCTTGAG...AAGAGAAATCTGTGGAATTATTGTGGGTGGTCTATAATCCTTAAGTGCAACGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469930.2
CDS-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATATGATGGTGGCTACTTaGAGGCTGCAAATTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNMMVAT*RLQILH
Trigger: ATGGAGAATTTGCAGCCTTCAAGTAGCCACCATCAT...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACATTGCTGGACCCAATaGGAAAGAAGGCAATGTGTG +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKHCWTQ*ERRQCV
Trigger: CACACATTGCCTTCTTTCTCATTGGGTCCAGCAATG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATAAGGAAGAAGGAGAATaGATGGAGACGCCACCATTT +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNKEEGE*METPPF
Trigger: AAATGGTGGCGTCTCCATTCATTCTCCTTCTTCCTT...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCATATTGTTTAAGAAACTaGAATGCTAAGCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLAYCLRN*NAKLPP
Trigger: GGGAGGAAGCTTAGCATTTCAGTTTCTTAAACAATA...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATTCAAGGTTAAGATTCTaGAACGTACCCCTAAACCGG +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNSRLRF*NVPLNR
Trigger: CCGGTTTAGGGGTACGTTTCAGAATCTTAACCTTGA...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATGTGAAACAGGAACCGTaGATTCACTGCAGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNVKQEP*IHCSSN
Trigger: GTTTGAACTGCAGTGAATTCACGGTTCCTGTTTCAC...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATGGAGTGCATCTAGCTTaGTGGTGTATTCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNGVHLA*WCILHR
Trigger: CCTATGAAGAATACACCAGCAAGCTAGATGCACTCC...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATGGCTACTTGAAGGCTaGAAATTCTCCATATCCCCC +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKWLLEG*KFSISP
Trigger: GGGGGATATGGAGAATTTGCAGCCTTCAAGTAGCCA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTAAGTTAATACATGATTaGTGCCCATCATACAGTACT +
Preference number: 4 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIKLIHD*CPSYST
Trigger: AGTACTGTATGATGGGCAGCAATCATGTATTAACTT...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACCCCTAAACCGGTTCTaGCACCACTTTCAACAACAT +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKPLNRF*HHFQQH
Trigger: ATGTTGTTGAAAGTGGTGCCAGAACCGGTTTAGGGG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGATTTCAAGGATGTGCTaGAGACAATACATGGACTTT +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKISRMC*RQYMDF
Trigger: AAAGTCCATGTATTGTCTCCAGCACATCCTTGAAAT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATCACCTCACCCCATTTTaGTCTCTGTTCTCTACATCT +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNHLTPF*SLFSTS
Trigger: AGATGTAGAGAACAGAGACCAAAATGGGGTGAGGTG...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 72 bp TATGATCCTATCTTAGGAAAGGCAGCAATTGCCATGTaGAGGAAAGGATCAGATGTACAACCAACAAATGAG +
Preference number: 4 (lower is better)
Translates to: YDPILGKAAIAM*RKGSDVQPTNE
Trigger: CTCATTTGTTGGTTGTACATCTGATCCTTTCCTCAACATGGCAATTGCTGCCTTTCCTAAGATAGGATCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATCTCCTACTTCATTTTTaGAGGCTTGTAACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNLLLHF*RLVTAE
Trigger: CTCAGCAGTTACAAGCCTTCAAAAATGAAGTAGGAG...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATTACAAAGTTTCAGGTTaGCAGTGCTGCAGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNYKVSG*QCCSLE
Trigger: TTCAAGACTGCAGCACTGTCAACCTGAAACTTTGTA...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATCACCATTTCAACTCATaGCCTGTAAGCTATTTGCTG +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNHHFNS*PVSYLL
Trigger: CAGCAAATAGCTTACAGGTCATGAGTTGAAATGGTG...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATAAAAGTTCCATGCTTTaGAGAGCCTATGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNKSSML*RAYGSR
Trigger: TCTACTCCCATAGGCTCTTCAAAGCATGGAACTTTT...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATCTGATGACTTCTGGTaGCATCCACAAAATGGATCC +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKSDDFW*HPQNGS
Trigger: GGATCCATTTTGTGGATGGCACCAGAAGTCATCAGA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAAATAAGAGCAGATGCTaGCATGATGGTGGCTACTTG +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKNKSRC*HDGGYL
Trigger: CAAGTAGCCACCATCATGGCAGCATCTGCTCTTATT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAAGAAATAAGAGCAGATaGTGCCATGATGGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKRNKSR*CHDGGY
Trigger: GTAGCCACCATCATGGCAGCATCTGCTCTTATTTCT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAAATTTTGTAAGACACTaGCCTGCTGATGTAAAACTT +
Preference number: 4 (lower is better)
Translates to: AGIPSTNNANLDKEENLANFVRH*PADVKL
Trigger: AAGTTTTACATCAGCAGGGCAGTGTCTTACAAAATT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATTTAAACCAGAGTGGCTaGTCTCTTCACAAATCACTG +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNLNQSG*SLHKSL
Trigger: CAGTGATTTGTGAAGAGAGCAGCCACTCTGGTTTAA...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGTCACTGAACTATATTTaGAACCTAGTTGCTCTATGT +
Preference number: 4 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKSLNYI*NLVALC
Trigger: ACATAGAGCAACTAGGTTGCAAATATAGTTCAGTGA...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATAACAGACCCTTCCTTTaGGGCATCTCTTCACAAATT +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNNRPFL*GISSQI
Trigger: AATTTGTGAAGAGATGCCGCAAAGGAAGGGTCTGTT...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp GGCTTTAAGCATACAGATGGGCTTGCTATTTTTGAACTATACAGTAATCTAGGTCATTCTGATGACTTCTaGTGCCATCCACAAAATGGA +
Preference number: 4 (lower is better)
Translates to: GFKHTDGLAIFELYSNLGHSDDF*CHPQNG
Trigger: TCCATTTTGTGGATGGCACCAGAAGTCATCAGAATG...ACCTAGATTACTGTATAGTTCAAAAATAGCAAGCCCATCTGTATGCTTAAAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CCA 90 bp TTCCTGTATGACATGGATGCCTCTATTTGCATGACCTCTGAGTATGAAGTAATAACTGTGGTTCAAGTTTaGCAGACAGGTTTAAATGTC +
Preference number: 4 (lower is better)
Translates to: FLYDMDASICMTSEYEVITVVQV*QTGLNV
Trigger: GACATTTAAACCTGTCTGCCAAACTTGAACCACAGT...TATTACTTCATACTCAGAGGTCATGCAAATAGAGGCATCCATGTCATACAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469930.2
CDS-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATACACTGGCTTACATTaGCTGTGTCCTCATACACAC +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKYTGLH*LCPHTH
Trigger: GTGTGTATGAGGACACAGCCAATGTAAGCCAGTGTA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 72 bp ATGTTGATGAATGATCAAATTCAATCCCCTGATCAGTaGTATGATCCTATCTTAGGAAAGGCAGCAATTGCC +
Preference number: 4 (lower is better)
Translates to: MLMNDQIQSPDQ*YDPILGKAAIA
Trigger: GGCAATTGCTGCCTTTCCTAAGATAGGATCATACAACTGATCAGGGGATTGAATTTGATCATTCATCAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR GCA 90 bp TTCGTTGCACTTAAGGATTATAGACCACCCACAATAATTCCACAGATTTCTCTTATGGATGCCTCTATTTaGATGACCTCTGAGTATGAA +
Preference number: 4 (lower is better)
Translates to: FVALKDYRPPTIIPQISLMDASI*MTSEYE
Trigger: TTCATACTCAGAGGTCATGCAAATAGAGGCATCCAT...AAGAGAAATCTGTGGAATTATTGTGGGTGGTCTATAATCCTTAAGTGCAACGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469930.2
CDS-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAGCTCTATTCTCTGTCTaGGAATTCAGCTGCCAAATT +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKALFSV*EFSCQI
Trigger: AATTTGGCAGCTGAATTCCCAGACAGAGAATAGAGC...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACTGAACCCTGCAATGTaGTTTCGAACTAAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKLNPAM*FRTKAR
Trigger: TCTAGCTTTAGTTCGAAACCACATTGCAGGGTTCAG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATTTCTTTTACATCCAATaGCCAGGTCATAAAGGATGC +
Preference number: 4 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNFFYIQ*PGHKGC
Trigger: GCATCCTTTATGACCTGGCCATTGGATGTAAAAGAA...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACTGAGTCTATATATGTaGCATGGCCAAAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKLSLYM*HGQRKH
Trigger: GTGTTTCCTTTGGCCATGCCACATATATAGACTCAG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp TATTTTTCATTCCTGTATGACATGGATGCCTCTATTTGCATGACCTCTGAGTATTTTTTCATTCCTGTATaGCATGGATGCCTCTATTTG +
Preference number: 4 (lower is better)
Translates to: YFSFLYDMDASICMTSEYFFIPV*HGCLYL
Trigger: CAAATAGAGGCATCCATGTCATACAGGAATGAAAAA...ATACTCAGAGGTCATGCAAATAGAGGCATCCATGTCATACAGGAATGAAAAATA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000469930.2
CDS-3UTR GCA 90 bp CTTTCACCTAATACTGCACAATTTTACAAAGGTTCATCAGACTTTAGGCAGCAATGGAGAGTAAGCCCTTaGCACATCATTTATTATACT +
Preference number: 4 (lower is better)
Translates to: LSPNTAQFYKGSSDFRQQWRVSP*HIIYYT
Trigger: AGTATAATAAATGATGTGGCAAGGGCTTACTCTCCA...TTGCTGCCTAAAGTCTGATGAACCTTTGTAAAATTGTGCAGTATTAGGTGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATTGTTGAAGAAACACTaGCAGCAGAGAATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKLLKKH*QQRILV
Trigger: AACCAGAATTCTCTGCTGCCAGTGTTTCTTCAACAA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATTCTTTTACATCCAATaGCCAGGTCATAAAGGATGC +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKFFYIQ*PGHKGC
Trigger: GCATCCTTTATGACCTGGCCATTGGATGTAAAAGAA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACCACCAAAACACACGTaGGTTCAAAAACTTAACACA +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKPPKHT*VQKLNT
Trigger: TGTGTTAAGTTTTTGAACCCACGTGTGTTTTGGTGG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR TCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATTCTTCAAATCAGCGTaGATTATTTCCACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKFFKSA*IISTFA
Trigger: TGCAAAGGTGGAAATAATTCACGCTGATTTGAAGAA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAAAGAAGGAGAATGAATaGAGACGCCACCATTTTTAT +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKKKENE*RRHHFY
Trigger: ATAAAAATGGTGGCGTCTCCATTCATTCTCCTTCTT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 72 bp ATTTACATTTCAAACTCTGAAAAATCAGTGTCTAGGTaGGCAGCAGTACTCTGGAAACTGATAAAACCAAAT +
Preference number: 4 (lower is better)
Translates to: IYISNSEKSVSR*AAVLWKLIKPN
Trigger: ATTTGGTTTTATCAGTTTCCAGAGTACTGCTGCCAACCTAGACACTGATTTTTCAGAGTTTGAAATGTAAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
3UTR CAA 72 bp AGTAACAGTTTACTTCTTATCCAAATCAATCACTACTaGACATTTAAGGAGAAAGTCAACTGCAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: SNSLLLIQINHY*TFKEKVNCSQN
Trigger: ATTCTGGCTGCAGTTGACTTTCTCCTTAAATGTCAAGTAGTGATTGATTTGGATAAGAAGTAAACTGTTACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR GCA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACAGCCTATTCTAAAATaGAAGGGAAGAAAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKQPILK*KGRKSV
Trigger: TACACTTTTTCTTCCCTTGCATTTTAGAATAGGCTG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTGGCTCCATGTCCCCGTaGAACAGAGCCTGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPGSMSP*NRAWPG
Trigger: GCCGGGCCAGGCTCTGTTCAACGGGGACATGGAGCC...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR CAA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTCGGACTGGTGAGAATTaGGGGCCCAATAGAGTCCGA +
Preference number: 5 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPRTGEN*GPNRVR
Trigger: TCGGACTCTATTGGGCCCCAAATTCTCACCAGTCCG...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR CAA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTCAGACAAACCTGTGGTaGATCCTCCATCACCACGAA +
Preference number: 5 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPQTNLW*ILHHHE
Trigger: TTCGTGGTGATGGAGGATCAACCACAGGTTTGTCTG...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR CAA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTAATAGAGGCGAGAATTaGGGGAAAGAGTGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPNRGEN*GKEWSL
Trigger: GAGAGACCACTCTTTCCCCAAATTCTCGCCTCTATT...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR CAA 90 bp AGTGGTGACAGTGCCAAATTACAGCCTTCCTTATACTTTGATGCCCTCTGCTCCGGCTCCATGTCCCCGTaGAACAGAGCCTGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: SGDSAKLQPSLYFDALCSGSMSP*NRAWPG
Trigger: GCCGGGCCAGGCTCTGTTCAACGGGGACATGGAGCC...GGAGCAGAGGGCATCAAAGTATAAGGAAGGCTGTAATTTGGCACTGTCACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CAA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAGGCTCCATGTCCCCGTaGAACAGAGCCTGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGGSMSP*NRAWPG
Trigger: GCCGGGCCAGGCTCTGTTCAACGGGGACATGGAGCC...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp AAGGCTCACAGCAGCCTCCGCCCCCAGGTTCAAGGGATCCTCCCACGTCAGCCTAACTTAATCATTTGTTaGATATTCCACACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KAHSSLRPQVQGILPRQPNLIIC*IFHTSS
Trigger: GGAGGAGGTGTGGAATATCAAACAAATGATTAAGTT...AGGCTGACGTGGGAGGATCCCTTGAACCTGGGGGCGGAGGCTGCTGTGAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646891.1
CDS-3UTR CAA 90 bp AAGGTTCATCAGACTTTAGGCAGCAAGATGAGTCTCTCCTTGGGTGACCACCTGCGGACTGGTGAGAATTaGGGGCCCAATAGAGTCCGA +
Preference number: 5 (lower is better)
Translates to: KVHQTLGSKMSLSLGDHLRTGEN*GPNRVR
Trigger: TCGGACTCTATTGGGCCCCAAATTCTCACCAGTCCG...CAGGTGGTCACCCAAGGAGAGACTCATCTTGCTGCCTAAAGTCTGATGAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CAA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATCACTATCTAGCCTGCTaGGTTAGACAGACCCCTCAG +
Preference number: 5 (lower is better)
Translates to: VLENELGWPGEADGLYKHHYLAC*VRQTPQ
Trigger: CTGAGGGGTCTGTCTAACCAAGCAGGCTAGATAGTG...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATTACTGCCACGGCATTTaGTGCCCTGGACAAAGTAGC +
Preference number: 5 (lower is better)
Translates to: VLENELGWPGEADGLYKHYCHGI*CPGQSS
Trigger: GCTACTTTGTCCAGGGCACAAAATGCCGTGGCAGTA...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CTTAGACATGACTGTGGTTCAAGTTTGGCAGACAGGTTTAAATGTCAAATCCAAGGCTCCATGTCCCCGTaGAACAGAGCCTGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: LRHDCGSSLADRFKCQIQGSMSP*NRAWPG
Trigger: GCCGGGCCAGGCTCTGTTCAACGGGGACATGGAGCC...TTGGATTTGACATTTAAACCTGTCTGCCAAACTTGAACCACAGTCATGTCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469930.2
CDS-3UTR CAA 90 bp AAGGTTCATCAGACTTTAGGCAGCAAGATGAGTCTCTCCTTGGGTGACCACCTGCAGACAAACCTGTGGTaGATCCTCCATCACCACGAA +
Preference number: 5 (lower is better)
Translates to: KVHQTLGSKMSLSLGDHLQTNLW*ILHHHE
Trigger: TTCGTGGTGATGGAGGATCAACCACAGGTTTGTCTG...CAGGTGGTCACCCAAGGAGAGACTCATCTTGCTGCCTAAAGTCTGATGAACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CAA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGAAAGAGAACGATGCTaGGTGATTGAAACTGCCCCA +
Preference number: 5 (lower is better)
Translates to: VLENELGWPGEADGLYKHERERC*VIETAP
Trigger: TGGGGCAGTTTCAATCACCAAGCATCGTTCTCTTTC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATGGGCAAGCTGCATTTTaGTTCCATCCCTCAGAAACT +
Preference number: 5 (lower is better)
Translates to: VLENELGWPGEADGLYKHGQAAF*FHPSET
Trigger: AGTTTCTGAGGGATGGAACAAAAATGCAGCTTGCCC...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATCAACAGACCCTTCCTTaGCGGCATCTCTTCACAAAT +
Preference number: 5 (lower is better)
Translates to: VLENELGWPGEADGLYKHQQTLP*RHLFTN
Trigger: ATTTGTGAAGAGATGCCGCAAAGGAAGGGTCTGTTG...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAGGCTCCATGTCCCCGTaGAACAGAGCCTGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKGSMSP*NRAWPG
Trigger: GCCGGGCCAGGCTCTGTTCAACGGGGACATGGAGCC...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCGGACTGGTGAGAATTaGGGGCCCAATAGAGTCCGA +
Preference number: 5 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIRTGEN*GPNRVR
Trigger: TCGGACTCTATTGGGCCCCAAATTCTCACCAGTCCG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTGGGACTGGGCAGACTaGTATGCTCGTGGTATTTTT +
Preference number: 5 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPWDWAD*YARGIF
Trigger: AAAAATACCACGAGCATACAAGTCTGCCCAGTCCCA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGATGGGCACAGCTTCATTaGAGATCAAGTCTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGWAQLH*RSSLLP
Trigger: GGGGAGCAGACTTGATCTCAAATGAAGCTGTGCCCA...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAGTCATAAAGGATGCCTaGAGACCTCCACCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: AGIPSTNNANLDKEENLAVIKDA*RPPPWP
Trigger: GGGCCAGGGTGGAGGTCTCAAGGCATCCTTTATGAC...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp AAGGTTCATCAGACTTTAGGCAGCAAGATGAGTCTCTCCTTGGGTGACCACCTGAGCCTTCCTTATACTTaGATGCCCTCTGCTCCCTTA +
Preference number: 5 (lower is better)
Translates to: KVHQTLGSKMSLSLGDHLSLPYT*MPSAPL
Trigger: TAAGGGAGCAGAGGGCATCAAAGTATAAGGAAGGCT...CAGGTGGTCACCCAAGGAGAGACTCATCTTGCTGCCTAAAGTCTGATGAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CAA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCATGATCAGCCACAAATaGATCTGGTGGTTAGAAGGG +
Preference number: 5 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPMISHK*IWWLEG
Trigger: CCCTTCTAACCACCAGATCAATTTGTGGCTGATCAT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTCACTATCTAGCCTGCTaGGTTAGACAGACCCCTCAG +
Preference number: 5 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIHYLAC*VRQTPQ
Trigger: CTGAGGGGTCTGTCTAACCAAGCAGGCTAGATAGTG...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTTACTGCCACGGCATTTaGTGCCCTGGACAAAGTAGC +
Preference number: 5 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIYCHGI*CPGQSS
Trigger: GCTACTTTGTCCAGGGCACAAAATGCCGTGGCAGTA...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCTCTACCTGCGGAAACTaGAAGCCAATCTTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPSTCGN*KPILVK
Trigger: CTTTACCAAGATTGGCTTCAAGTTTCCGCAGGTAGA...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATCAATCCCCTGATCAGTaGTATGATCCTATCTTAGGA +
Preference number: 5 (lower is better)
Translates to: VLENELGWPGEADGLYKHQSPDQ*YDPILG
Trigger: TCCTAAGATAGGATCATACAACTGATCAGGGGATTG...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCCAATCCCCTGATCAGTaGTATGATCCTATCTTAGGA +
Preference number: 5 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPQSPDQ*YDPILG
Trigger: TCCTAAGATAGGATCATACAACTGATCAGGGGATTG...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp TCCTTATACTTTGATGCCCTCTGCTCCCTTATTACAACCAAGCTGCCTGGAGGCATGGAGAGTAAGCCCTaGCCACATCATTTATTATAC +
Preference number: 5 (lower is better)
Translates to: SLYFDALCSLITTKLPGGMESKP*PHHLLY
Trigger: GTATAATAAATGATGTGGCAAGGGCTTACTCTCCAT...GCCTCCAGGCAGCTTGGTTGTAATAAGGGAGCAGAGGGCATCAAAGTATAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CAA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGCAGACAAACCTGTGGTaGATCCTCCATCACCACGAA +
Preference number: 5 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKQTNLW*ILHHHE
Trigger: TTCGTGGTGATGGAGGATCAACCACAGGTTTGTCTG...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496384.7
CDS-3UTR CAA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGACTCGTGGTATTTTTGTaGAAGAAACACTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGLVVFL*KKHWQQ
Trigger: CTGCTGCCAGTGTTTCTTCAACAAAAATACCACGAG...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTGAAAGAGAACGATGCTaGGTGATTGAAACTGCCCCA +
Preference number: 5 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIERERC*VIETAP
Trigger: TGGGGCAGTTTCAATCACCAAGCATCGTTCTCTTTC...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAAACACTTATCTTCATaGCTGGACCCAATGAGAAAG +
Preference number: 5 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPKHLSS*LDPMRK
Trigger: CTTTCTCATTGGGTCCAGCAATGAAGATAAGTGTTT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAAAATTGCCCAACCTTTaGAAGACCAGGCTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGKLPNL*KTRLGK
Trigger: TTTCCCAAGCCTGGTCTTCAAAAGGTTGGGCAATTT...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp GTGCTGGAGAATGAACTCGGCTGGCCGGGAGAAGCAGATGGTTTGTACAAACATCTTGGTTGGTCTGATTaGATTTGTGTTCCTAAATTC +
Preference number: 5 (lower is better)
Translates to: VLENELGWPGEADGLYKHLGWSD*ICVPKF
Trigger: GAATTTAGGAACACAAATCAAATCAGACCAACCAAG...ATGTTTGTACAAACCATCTGCTTCTCCCGGCCAGCCGAGTTCATTCTCCAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAAACTTGAAGCCAATCTaGGTAAAGGGAACACAGCCA +
Preference number: 5 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGNLKPI*VKGTQP
Trigger: TGGCTGTGTTCCCTTTACCAAGATTGGCTTCAAGTT...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATGTCATAAAGGATGCCTaGAGACCTCCACCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNVIKDA*RPPPWP
Trigger: GGGCCAGGGTGGAGGTCTCAAGGCATCCTTTATGAC...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAATACACTGGCTTACATaGGCTGTGTCCTCATACACA +
Preference number: 5 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGIHWLT*AVSSYT
Trigger: TGTGTATGAGGACACAGCCAATGTAAGCCAGTGTAT...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAACTAAACCCGAACCTTaGGCAGTAACAGAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGTKPEP*AVTEKR
Trigger: CCTCTTTTCTGTTACTGCCAAAGGTTCGGGTTTAGT...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS TCA 90 bp CCCTGCTACAGGGCAGAGCTGATGAATTTTAGAAACCGCCAAGCTTaGTACATTGTGTTATTTCCTGTTTGGTGCTGTAATGACCCTTGT +
Preference number: 5 (lower is better)
Translates to: PCYRAELMNFRNRQA*YIVLFPVWCCNDPC
Trigger: ACAAGGGTCATTACAGCACCAAACAGGAAATAACACAATGTATCAAGCTTGGCGGTTTCTAAAATTCATCAGCTCTGCCCTGTAGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645443.1
CDS GCA 90 bp TATCCTTCTGTTGGTCACACATTCCTCTCATGGAGAGTAAGCCCTTaGCACATCATTTATTATACTCCCATGGAGGACAAAGCACCTGTT +
Preference number: 5 (lower is better)
Translates to: YPSVGHTFLSWRVSP*HIIYYTPMEDKAPV
Trigger: AACAGGTGCTTTGTCCTCCATGGGAGTATAATAAATGATGTGGCAAGGGCTTACTCTCCATGAGAGGAATGTGTGACCAACAGAAGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644650.1
CDS-3UTR CAA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCAACTTAATCATTTGTTaGATATTCCACACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPNLIIC*IFHTSS
Trigger: GGAGGAGGTGTGGAATATCAAACAAATGATTAAGTT...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp TCCTTATACTTTGATGCCCTCTGCTCCCTTATTACAACCAAGCTGCCTGGAGGCAACTTAATCATTTGTTaGATATTCCACACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLYFDALCSLITTKLPGGNLIIC*IFHTSS
Trigger: GGAGGAGGTGTGGAATATCAAACAAATGATTAAGTT...GCCTCCAGGCAGCTTGGTTGTAATAAGGGAGCAGAGGGCATCAAAGTATAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CAA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATACTGGGAGTCCGGGATaGGTATTTCCGAAGACAGCG +
Preference number: 5 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNTGSPG*VFPKTA
Trigger: CGCTGTCTTCGGAAATACCAATCCCGGACTCCCAGT...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644969.2
CDS-3UTR CAA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGAATAGAGGCGAGAATTaGGGGAAAGAGTGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKNRGEN*GKEWSL
Trigger: GAGAGACCACTCTTTCCCCAAATTCTCGCCTCTATT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCACATGATGGTGGCTACTaGAAGGCTGCAAATTCTCCA +
Preference number: 5 (lower is better)
Translates to: AGIPSTNNANLDKEENLAHDGGY*KAANSP
Trigger: TGGAGAATTTGCAGCCTTCAAGTAGCCACCATCATG...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp AAGGCCAAACTGAGTCTATATATGTGGCATGGCCAAAGGAAACACGGAGGACCCGTATTTCCTGAGAATTaGCTACATTGTGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: KAKLSLYMWHGQRKHGGPVFPEN*LHCGGK
Trigger: TTTTCCTCCACAATGTAGCAAATTCTCAGGAAATAC...GGGTCCTCCGTGTTTCCTTTGGCCATGCCACATATATAGACTCAGTTTGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGATTCGGGAACCAGAATTaGACAGCTAGACAGAATCTT +
Preference number: 5 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGFGNQN*TARQNL
Trigger: AAGATTCTGTCTAGCTGTCAAATTCTGGTTCCCGAA...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTGCAGCAATTGCCATGTaGAGGAAAGGATCAGATGTA +
Preference number: 5 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIAAIAM*RKGSDV
Trigger: TACATCTGATCCTTTCCTCAACATGGCAATTGCTGC...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTACTAAACCCGAACCTTaGGCAGTAACAGAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: TSCDESAVTAPNQKLGNITKPEP*AVTEKR
Trigger: CCTCTTTTCTGTTACTGCCAAAGGTTCGGGTTTAGT...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAGAACCTTTTCAATGCTaGAGTGGAACTGAAGTGTAC +
Preference number: 5 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGEPFQC*SGTEVY
Trigger: GTACACTTCAGTTCCACTCAAGCATTGAAAAGGTTC...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CTTTCACCTAATACTGCACAATTTTACAAAGGTTCATCAGACTTTAGGCAGCAAAAGATGAGTCTCTCCTaGGGTGACCACCTGGACTGG +
Preference number: 5 (lower is better)
Translates to: LSPNTAQFYKGSSDFRQQKMSLS*GDHLDW
Trigger: CCAGTCCAGGTGGTCACCCAAGGAGAGACTCATCTT...TTGCTGCCTAAAGTCTGATGAACCTTTGTAAAATTGTGCAGTATTAGGTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CAA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACGGACTGGTGAGAATTaGGGGCCCAATAGAGTCCGA +
Preference number: 5 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKRTGEN*GPNRVR
Trigger: TCGGACTCTATTGGGCCCCAAATTCTCACCAGTCCG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp TGGCGTGTAAGTAACTACTTAGACATTTGCATGTCAGCCCTCTTTCACCTAATAAATAGAGGCGAGAATTaGGGGAAAGAGTGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: WRVSNYLDICMSALFHLINRGEN*GKEWSL
Trigger: GAGAGACCACTCTTTCCCCAAATTCTCGCCTCTATT...TATTAGGTGAAAGAGGGCTGACATGCAAATGTCTAAGTAGTTACTTACACGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CAA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGAACTTGAAGCCAATCTaGGTAAAGGGAACACAGCCA +
Preference number: 5 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKNLKPI*VKGTQP
Trigger: TGGCTGTGTTCCCTTTACCAAGATTGGCTTCAAGTT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAAAATCAGTGTCTAGGTaGGCAGCAGTACTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: AGIPSTNNANLDKEENLAKSVSR*AAVLWK
Trigger: TTTCCAGAGTACTGCTGCCAACCTAGACACTGATTT...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp GCTGGTATTCCTAGCACTAACAATGCCAACTTGGACAAAGAAGAGAATCTTGCAGCAGCAATTGCCATGTaGAGGAAAGGATCAGATGTA +
Preference number: 5 (lower is better)
Translates to: AGIPSTNNANLDKEENLAAAIAM*RKGSDV
Trigger: TACATCTGATCCTTTCCTCAACATGGCAATTGCTGC...TGCAAGATTCTCTTCTTTGTCCAAGTTGGCATTGTTAGTGCTAGGAATACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp ACATCCTGTGATGAAAGTGCTGTCACCGCACCAAACCAGAAGCTAGGAAATATTGAACCTTTTCAATGCTaGAGTGGAACTGAAGTGTAC +
Preference number: 5 (lower is better)
Translates to: TSCDESAVTAPNQKLGNIEPFQC*SGTEVY
Trigger: GTACACTTCAGTTCCACTCAAGCATTGAAAAGGTTC...AATATTTCCTAGCTTCTGGTTTGGTGCGGTGACAGCACTTTCATCACAGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CAAGTCTGCTCCCCCGTTCAAATGAGATACCAGCCTATTCTAAAATGCAAGGGAAGATTCAAGCAAACATaGAGAATAGGGGAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: QVCSPVQMRYQPILKCKGRFKQT*RIGEKR
Trigger: CCTCTTTTCCCCTATTCTCAATGTTTGCTTGAATCT...TCCCTTGCATTTTAGAATAGGCTGGTATCTCATTTGAACGGGGGAGCAGACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS CCA 90 bp TGCCCAGATGCTATAGTAGCAGAGCTCATTCTTCTAATTGTGCGATaGTCAAGAAATATCCATTCTTGTAACTGTAGTTTCTGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: CPDAIVAELILLIVR*SRNIHSCNCSFWSL
Trigger: CAGGGACCAGAAACTACAGTTACAAGAATGGATATTTCTTGACCATCGCACAATTAGAAGAATGAGCTCTGCTACTATAGCATCTGGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644650.1
CDS-3UTR CAA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGATTTCTTTCAAGTCCTaGGCTATAGCTTGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKISFKS*AIAWLV
Trigger: GACCAACCAAGCTATAGCCAAGGACTTGAAAGAAAT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATGGGCACAGCTTCATTaGAGATCAAGTCTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKWAQLH*RSSLLP
Trigger: GGGGAGCAGACTTGATCTCAAATGAAGCTGTGCCCA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGTACTTTAGTCACTCATaGAGTTGCCGACTAATTGCC +
Preference number: 5 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKYFSHS*SCRLIA
Trigger: GGCAATTAGTCGGCAACTCAATGAGTGACTAAAGTA...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATATGAAACACATCCTCTaGTTCAAGCCCAGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNMKHIL*FKPRSL
Trigger: GAGAGACCTGGGCTTGAACAAGAGGATGTGTTTCAT...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGAGATTCAAGCAAACATaGAGAATAGGGGAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKRFKQT*RIGEKR
Trigger: CCTCTTTTCCCCTATTCTCAATGTTTGCTTGAATCT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CCTACCAAAAATAAAACACACTACAGAAGGCACTGCAGCCACTTTACAGACAAGAACTTAATCATTTGTTaGATATTCCACACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PTKNKTHYRRHCSHFTDKNLIIC*IFHTSS
Trigger: GGAGGAGGTGTGGAATATCAAACAAATGATTAAGTT...CTTGTCTGTAAAGTGGCTGCAGTGCCTTCTGTAGTGTGTTTTATTTTTGGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp TTCCTGTATGACATGGATGCCTCTATTTGCATGACCTCTGAGTATGAAGTAATAGACTGTGGTTCAAGTTaGGCAGACAGGTTTAAATGT +
Preference number: 5 (lower is better)
Translates to: FLYDMDASICMTSEYEVIDCGSS*ADRFKC
Trigger: ACATTTAAACCTGTCTGCCAAACTTGAACCACAGTC...TATTACTTCATACTCAGAGGTCATGCAAATAGAGGCATCCATGTCATACAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469930.2
CDS-3UTR CAA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACATGATGGTGGCTACTaGAAGGCTGCAAATTCTCCA +
Preference number: 5 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKHDGGY*KAANSP
Trigger: TGGAGAATTTGCAGCCTTCAAGTAGCCACCATCATG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAGGGCAAGCTGCATTTTaGTTCCATCCCTCAGAAACT +
Preference number: 5 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKGQAAF*FHPSET
Trigger: AGTTTCTGAGGGATGGAACAAAAATGCAGCTTGCCC...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp TTAATACATGATTGCTGCCCATCATACAGTACTTCAACCCTAAACTACAGCAATAAATCAGTGTCTAGGTaGGCAGCAGTACTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LIHDCCPSYSTSTLNYSNKSVSR*AAVLWK
Trigger: TTTCCAGAGTACTGCTGCCAACCTAGACACTGATTT...ATTGCTGTAGTTTAGGGTTGAAGTACTGTATGATGGGCAGCAATCATGTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACTCGTGGTATTTTTGTaGAAGAAACACTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKLVVFL*KKHWQQ
Trigger: CTGCTGCCAGTGTTTCTTCAACAAAAATACCACGAG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAAATTCAGCTGCCAAATaGCCCAACCTTTTGAAGACC +
Preference number: 5 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKNSAAK*PNLLKT
Trigger: GGTCTTCAAAAGGTTGGGCAATTTGGCAGCTGAATT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATCTACCTGCGGAAACTaGAAGCCAATCTTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKSTCGN*KPILVK
Trigger: CTTTACCAAGATTGGCTTCAAGTTTCCGCAGGTAGA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS CCA 90 bp TCAAAGTTGAGAGAAAGGATCTGGAGTTCCTATAGTCATATATTATaGACAGCAATTCAGGTATTCTTACTTGGCTATCAGTGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: SKLRERIWSSYSHIL*TAIQVFLLGYQWKR
Trigger: CCTTTTCCACTGATAGCCAAGTAAGAATACCTGAATTGCTGTCCATAATATATGACTATAGGAACTCCAGATCCTTTCTCTCAACTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645443.1
CDS-3UTR CAA 90 bp CTTAGACATGACTGTGGTTCAAGTTTGGCAGACAGGTTTAAATGTCAAATCCAAAACTTAATCATTTGTTaGATATTCCACACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LRHDCGSSLADRFKCQIQNLIIC*IFHTSS
Trigger: GGAGGAGGTGTGGAATATCAAACAAATGATTAAGTT...TTGGATTTGACATTTAAACCTGTCTGCCAAACTTGAACCACAGTCATGTCTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469930.2
CDS-3UTR CAA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAATACTTTAGTCACTCATaGAGTTGCCGACTAATTGCC +
Preference number: 5 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKYFSHS*SCRLIA
Trigger: GGCAATTAGTCGGCAACTCAATGAGTGACTAAAGTA...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp GGCTTTAAGCATACAGATGGGCTTGCTATTTTTGAACTATACAGTAATCTAGGTAAAATTATCCTTCTGTaGGTCACACATTCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: GFKHTDGLAIFELYSNLGKIILL*VTHSSH
Trigger: ATGAGAGGAATGTGTGACCAACAGAAGGATAATTTT...ACCTAGATTACTGTATAGTTCAAAAATAGCAAGCCCATCTGTATGCTTAAAGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS-3UTR CAA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAAAGAGAGGCAGTATTATaGCACAGAAGATGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKREAVL*HRRCSS
Trigger: TGAAGAACATCTTCTGTGCAATAATACTGCCTCTCT...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS-3UTR CAA 90 bp CTTTCACCTAATACTGCACAATTTTACAAAGGTTCATCAGACTTTAGGCAGCAAAGCATACAGATGGGCTaGCTATTTTTGAACTATACA +
Preference number: 5 (lower is better)
Translates to: LSPNTAQFYKGSSDFRQQSIQMG*LFLNYT
Trigger: TGTATAGTTCAAAAATAGCAAGCCCATCTGTATGCT...TTGCTGCCTAAAGTCTGATGAACCTTTGTAAAATTGTGCAGTATTAGGTGAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646730.1
CDS TCA 90 bp GCTGTGATGATCATTTACTGCCTTGTATGGTTATTAATCTTTTTGTaGTATGTATCTTATCTAAGTTCTCCAATGAGACTATGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: AVMIIYCLVWLLIFL*YVSYLSSPMRLWVL
Trigger: GAGCACCCATAGTCTCATTGGAGAACTTAGATAAGATACATATCACAAAAAGATTAATAACCATACAAGGCAGTAAATGATCATCACAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645443.1
CDS CCA 90 bp TGTTATGTTCAAGTCTTTGATCCATTTTGGGTTATTCTTTGTACATaGTATAAGGGAAGGGTACCACTTCATTCTTTTGCATGTGGATAT +
Preference number: 5 (lower is better)
Translates to: CYVQVFDPFWVILCT*YKGRVPLHSFACGY
Trigger: ATATCCACATGCAAAAGAATGAAGTGGTACCCTTCCCTTATACCATGTACAAAGAATAACCCAAAATGGATCAAAGACTTGAACATAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644120.1
CDS-3UTR CAA 90 bp CAACCAACAAATGAGATTACCACAAATACATATCACTGTGATACAGTCCTCAAACTTGGTTGGTCTGATTaGATTTGTGTTCCTAAATTC +
Preference number: 5 (lower is better)
Translates to: QPTNEITTNTYHCDTVLKLGWSD*ICVPKF
Trigger: GAATTTAGGAACACAAATCAAATCAGACCAACCAAG...TTTGAGGACTGTATCACAGTGATATGTATTTGTGGTAATCTCATTTGTTGGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496384.7
ENST00000644969.2
CDS CCA 72 bp GTCCGGGATTGGTATTTCCGAAGACAGCGCATCAGCTaGTTCAAAGGGGCTCCATCACCACGAAATCCTTGG +
Preference number: 6 (lower is better)
Translates to: VRDWYFRRQRIS*FKGAPSPRNPW
Trigger: CCAAGGATTTCGTGGTGATGGAGCCCCTTTGAACCAGCTGATGCGCTGTCTTCGGAAATACCAATCCCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288602.11
ENST00000644969.2
CDS CCA 72 bp GGGACAGAATGTAGGAGGGGACTGGGAGTCCGGGATTaGTATTTCCGAAGACAGCGCATCAGCTGGTTCAAA +
Preference number: 6 (lower is better)
Translates to: GTECRRGLGVRD*YFRRQRISWFK
Trigger: TTTGAACCAGCTGATGCGCTGTCTTCGGAAATACCAATCCCGGACTCCCAGTCCCCTCCTACATTCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288602.11
ENST00000644969.2
CDS CCA 72 bp ACACTATTTCACTGGGGACAGAATGTAGGAGGGGACTaGGAGTCCGGGATTGGTATTTCCGAAGACAGCGCA +
Preference number: 6 (lower is better)
Translates to: TLFHWGQNVGGD*ESGIGISEDSA
Trigger: TGCGCTGTCTTCGGAAATACCAATCCCGGACTCCCAGTCCCCTCCTACATTCTGTCCCCAGTGAAATAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288602.11
ENST00000644969.2
CDS CCA 72 bp CTTGGCACTCCTGGGCGAGCAGTAAAGGCTCTTCATTaGAATGAAGATGCTGCAGATAGTATCTTAGTCTGC +
Preference number: 6 (lower is better)
Translates to: LGTPGRAVKALH*NEDAADSILVC
Trigger: GCAGACTAAGATACTATCTGCAGCATCTTCATTCCAATGAAGAGCCTTTACTGCTCGCCCAGGAGTGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644905.1
CDS CCA 72 bp GGAGTGCAAGCTCAAATCTTCATGATCCTTGGACTGTaGCAAAGGTTCTCTAATTGCTCCCCTGCTTTTGGT +
Preference number: 6 (lower is better)
Translates to: GVQAQIFMILGL*QRFSNCSPAFG
Trigger: ACCAAAAGCAGGGGAGCAATTAGAGAACCTTTGCCACAGTCCAAGGATCATGAAGATTTGAGCTTGCACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645443.1
CDS CAA 90 bp GGTCCAATTTCTCCACACCCTTGCCAACTCTTGTTATCTTCTTTTTaGTCTGATAGCCGACATCCTAATGGGTGTGAGGTGGTATCTCCT +
Preference number: 6 (lower is better)
Translates to: GPISPHPCQLLLSSF*SDSRHPNGCEVVSP
Trigger: AGGAGATACCACCTCACACCCATTAGGATGTCGGCTATCAGACAAAAAAGAAGATAACAAGAGTTGGCAAGGGTGTGGAGAAATTGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644120.1
CDS GCA 72 bp TTCATGATCCTTGGACTGTGGCAAAGGTTCTCTAATTaGTCCCCTGCTTTTGGTCTCTCTTTATCCAGTCCA +
Preference number: 6 (lower is better)
Translates to: FMILGLWQRFSN*SPAFGLSLSSP
Trigger: TGGACTGGATAAAGAGAGACCAAAAGCAGGGGAGCAATTAGAGAACCTTTGCCACAGTCCAAGGATCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645443.1
CDS CCA 72 bp GTAATGTTCAGTTGTCGAGAAACCAAAAGCAGGCTGTaGTATCCTGCTCTCCTATACATGCATGCACAATCC +
Preference number: 6 (lower is better)
Translates to: VMFSCRETKSRL*YPALLYMHAQS
Trigger: GGATTGTGCATGCATGTATAGGAGAGCAGGATACCACAGCCTGCTTTTGGTTTCTCGACAACTGAACATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644905.1
CDS CAA 90 bp TTATCCTTCTGTTGGTCACACATTCCTCTCATGGAGAGTAAGCCCTaGCCACATCATTTATTATACTCCCATGGAGGACAAAGCACCTGT +
Preference number: 6 (lower is better)
Translates to: LSFCWSHIPLMESKP*PHHLLYSHGGQSTC
Trigger: ACAGGTGCTTTGTCCTCCATGGGAGTATAATAAATGATGTGGCAAGGGCTTACTCTCCATGAGAGGAATGTGTGACCAACAGAAGGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644650.1
CDS TCA 72 bp GGAAACCCACAAAAGGAGTGCAAGCTCAAATCTTCATaGTCCTTGGACTGTGGCAAAGGTTCTCTAATTGCT +
Preference number: 6 (lower is better)
Translates to: GNPQKECKLKSS*SLDCGKGSLIA
Trigger: AGCAATTAGAGAACCTTTGCCACAGTCCAAGGATCATGAAGATTTGAGCTTGCACTCCTTTTGTGGGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645443.1
CDS CAA 90 bp GAAGACAGCAGTCTTAGAATTTTGGGAGCAACCTGGAATAATATGTaGGAGCAACAAGTGACAAGCAACAGCCAGGAGAATGTAAAGCAC +
Preference number: 6 (lower is better)
Translates to: EDSSLRILGATWNNM*EQQVTSNSQENVKH
Trigger: GTGCTTTACATTCTCCTGGCTGTTGCTTGTCACTTGTTGCTCCAACATATTATTCCAGGTTGCTCCCAAAATTCTAAGACTGCTGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645443.1
CDS GCA 72 bp GTACGAACACAAGACTTAAGAAATAAGAGCAGATGCTaGCATGATGGTGGCTACTTGAAGGCTGCAAATTCT +
Preference number: 6 (lower is better)
Translates to: VRTQDLRNKSRC*HDGGYLKAANS
Trigger: AGAATTTGCAGCCTTCAAGTAGCCACCATCATGGCAGCATCTGCTCTTATTTCTTAAGTCTTGTGTTCGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496384.7
ENST00000642875.1
ENST00000644120.1
ENST00000644969.2
CDS CAA 72 bp GCCTCTCTCAGTTTTCACTACCAACAACATCCTAGGTaGGCCTTCTTCACCCTAAATTTTCTGTCAATCCAT +
Preference number: 6 (lower is better)
Translates to: ASLSFHYQQHPR*AFFTLNFLSIH
Trigger: ATGGATTGACAGAAAATTTAGGGTGAAGAAGGCCAACCTAGGATGTTGTTGGTAGTGAAAACTGAGAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642272.1
CDS CAA 90 bp GTCTTCACTGCCTCTCTCAGTTTTCACTACCAACAACATCCTAGGTaGGCCTTCTTCACCCTAAATTTTCTGTCAATCCATCTGTATTTC +
Preference number: 6 (lower is better)
Translates to: VFTASLSFHYQQHPR*AFFTLNFLSIHLYF
Trigger: GAAATACAGATGGATTGACAGAAAATTTAGGGTGAAGAAGGCCAACCTAGGATGTTGTTGGTAGTGAAAACTGAGAGAGGCAGTGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642272.1
CDS TCA 72 bp TTCCCTGGGCTTTTGGCATCACGGCCAAGAAATCATTaGCAAATCCAAAGTTATGATGCTTTTCTCCTATGT +
Preference number: 6 (lower is better)
Translates to: FPGLLASRPRNH*QIQSYDAFLLC
Trigger: ACATAGGAGAAAAGCATCATAACTTTGGATTTGTCAATGATTTCTTGGCCGTGATGCCAAAAGCCCAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644120.1
CDS GCA 72 bp ATTGTACGAACACAAGACTTAAGAAATAAGAGCAGATaGTGCCATGATGGTGGCTACTTGAAGGCTGCAAAT +
Preference number: 6 (lower is better)
Translates to: IVRTQDLRNKSR*CHDGGYLKAAN
Trigger: ATTTGCAGCCTTCAAGTAGCCACCATCATGGCAGCATCTGCTCTTATTTCTTAAGTCTTGTGTTCGTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496384.7
ENST00000642875.1
ENST00000644120.1
ENST00000644969.2
CDS CAA 72 bp CTCCTCTATCAACAGAAATCTGGGTTGCTTCTGCCTTaGGCTACTATAGTGAATAATGCTGCTATGAACATG +
Preference number: 6 (lower is better)
Translates to: LLYQQKSGLLLP*ATIVNNAAMNM
Trigger: CATGTTCATAGCAGCATTATTCACTATAGTAGCCAAAGGCAGAAGCAACCCAGATTTCTGTTGATAGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644120.1
CDS CAA 90 bp GTACCATATTTTGTTCATCCACTCCTCTATCAACAGAAATCTGGGTaGCTTCTGCCTTTGGCTACTATAGTGAATAATGCTGCTATGAAC +
Preference number: 6 (lower is better)
Translates to: VPYFVHPLLYQQKSG*LLPLATIVNNAAMN
Trigger: GTTCATAGCAGCATTATTCACTATAGTAGCCAAAGGCAGAAGCAACCCAGATTTCTGTTGATAGAGGAGTGGATGAACAAAATATGGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644120.1
CDS TCA 72 bp TTGCAATGTGGCCTCTATGTAGTAGAGGTTAAAGGATaGACCTTGGAAAGAGTTACTGAATTGAGGGGATTA +
Preference number: 6 (lower is better)
Translates to: LQCGLYVVEVKG*TLERVTELRGL
Trigger: TAATCCCCTCAATTCAGTAACTCTTTCCAAGGTTCATCCTTTAACCTCTACTACATAGAGGCCACATTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645443.1
CDS TCA 72 bp AGGGCAGAGCTGATGAATTTTAGAAACCGCCAAGCTTaGTACATTGTGTTATTTCCTGTTTGGTGCTGTAAT +
Preference number: 6 (lower is better)
Translates to: RAELMNFRNRQA*YIVLFPVWCCN
Trigger: ATTACAGCACCAAACAGGAAATAACACAATGTATCAAGCTTGGCGGTTTCTAAAATTCATCAGCTCTGCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645443.1
CDS CAA 72 bp TTTGTTCATCCACTCCTCTATCAACAGAAATCTGGGTaGCTTCTGCCTTTGGCTACTATAGTGAATAATGCT +
Preference number: 6 (lower is better)
Translates to: FVHPLLYQQKSG*LLPLATIVNNA
Trigger: AGCATTATTCACTATAGTAGCCAAAGGCAGAAGCAACCCAGATTTCTGTTGATAGAGGAGTGGATGAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644120.1
CDS CAA 72 bp GTAAAGACTTCTGATAGATTTTCTTGTAATGTTCAGTaGTCGAGAAACCAAAAGCAGGCTGTGGTATCCTGC +
Preference number: 6 (lower is better)
Translates to: VKTSDRFSCNVQ*SRNQKQAVVSC
Trigger: GCAGGATACCACAGCCTGCTTTTGGTTTCTCGACAACTGAACATTACAAGAAAATCTATCAGAAGTCTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644905.1
CDS CAA 90 bp CCTACTATTGTAAAGACTTCTGATAGATTTTCTTGTAATGTTCAGTaGTCGAGAAACCAAAAGCAGGCTGTGGTATCCTGCTCTCCTATA +
Preference number: 6 (lower is better)
Translates to: PTIVKTSDRFSCNVQ*SRNQKQAVVSCSPI
Trigger: TATAGGAGAGCAGGATACCACAGCCTGCTTTTGGTTTCTCGACAACTGAACATTACAAGAAAATCTATCAGAAGTCTTTACAATAGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644905.1
CDS CCA 72 bp TTCAAACAGGGGTCTTCAAAGTTGAGAGAAAGGATCTaGAGTTCCTATAGTCATATATTATGGACAGCAATT +
Preference number: 6 (lower is better)
Translates to: FKQGSSKLRERI*SSYSHILWTAI
Trigger: AATTGCTGTCCATAATATATGACTATAGGAACTCCAGATCCTTTCTCTCAACTTTGAAGACCCCTGTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645443.1
CDS TCA 72 bp AAAGAATTATTTTGTCCCGGAAAAGTTGTAGGCATATaGATTCCATTCGTTCTCTCTCTCTCTCAACAGAAA +
Preference number: 6 (lower is better)
Translates to: KELFCPGKVVGI*IPFVLSLSQQK
Trigger: TTTCTGTTGAGAGAGAGAGAGAACGAATGGAATTCATATGCCTACAACTTTTCCGGGACAAAATAATTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646427.1