RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BPTF (Homo sapiens)

Ensembl gene IDs: ENSG00000171634

Ensembl transcript IDs: ENST00000306378.11, ENST00000321892.8, ENST00000335221.9, ENST00000342579.8, ENST00000424123.7, ENST00000544491.2, ENST00000544778.6, ENST00000577770.1, ENST00000577837.1, ENST00000578307.1, ENST00000579173.1, ENST00000580465.5, ENST00000581258.5, ENST00000582406.1, ENST00000582467.1, ENST00000584931.1, ENST00000644067.1

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAGGATaGTCTCCATTTTGGGCAACAGTAATACACCTCCTTCTCCAGACA +
Preference number: 1 (lower is better)
Translates to: RISCIRRALNRSQKG*SPFWATVIHLLLQT
Trigger: TGTCTGGAGAAGGAGGTGTATTACTGTTGCCCAAAATGGAGAGCATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
3UTR CCA 90 bp ATTCGCAGGGCTTTGAACAGATCCCAGAAAGGATGCTCTCCATTTTaGGCAACAGTAATACACCTCCTTCTCCAGACATCAATTACTCAC +
Preference number: 1 (lower is better)
Translates to: IRRALNRSQKGCSPF*ATVIHLLLQTSITH
Trigger: GTGAGTAATTGATGTCTGGAGAAGGAGGTGTATTACTGTTGCCCAAAATGGAGAGCATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
3UTR CAA 90 bp TATTCGCAGGGCTTTGAACAGATCCCAGAAAGGATGCTCTCCATTTaGGGCAACAGTAATACACCTCCTTCTCCAGACATCAATTACTCA +
Preference number: 2 (lower is better)
Translates to: YSQGFEQIPERMLSI*GNSNTPPSPDINYS
Trigger: TGAGTAATTGATGTCTGGAGAAGGAGGTGTATTACTGTTGCCCAAAATGGAGAGCATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
3UTR CAA 90 bp ATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTaGAACAGATCCCAGAAAGGATGCTCTCCATTTTGGGCAACAGTA +
Preference number: 2 (lower is better)
Translates to: IHVQLVSRISCIRRA*NRSQKGCSPFWATV
Trigger: TACTGTTGCCCAAAATGGAGAGCATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
3UTR TCA 72 bp AACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTaGACAGATCCCAGAAAGGATGCTCTCCATTTTGGG +
Preference number: 3 (lower is better)
Translates to: NWFPGFHVFAGL*TDPRKDALHFG
Trigger: CCCAAAATGGAGAGCATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
3UTR-3UTR CAA 90 bp CAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAACAATTACTCACTGATTaGGAGTTAATTCAGAGGGAA +
Preference number: 3 (lower is better)
Translates to: QLVSRISCIRRALNRSQKQLLTD*ELIQRE
Trigger: TTCCCTCTGAATTAACTCCAAATCAGTGAGTAATTG...TTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp GGCAACAGTAATACACCTCCTTCTCCAGACATCAATTACTCACTGATTTGGAGTCTGCTGGCCTGGGCCTaGGAGTACAGTCACCCCTTG +
Preference number: 4 (lower is better)
Translates to: GNSNTPPSPDINYSLIWSLLAWA*EYSHPL
Trigger: CAAGGGGTGACTGTACTCCCAGGCCCAGGCCAGCAG...ACTCCAAATCAGTGAGTAATTGATGTCTGGAGAAGGAGGTGTATTACTGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp ACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCGCTTGCATTAGCTGCTaGCCTGGGCCTGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: TSDHSCSTGFQDFMYSQGACISC*PGPGST
Trigger: TGTACTCCCAGGCCCAGGCCAGCAGCTAATGCAAGC...GCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp ACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTGGTGCTGGCTGTGGTaGCTGTTGTTGCCAATGGGG +
Preference number: 4 (lower is better)
Translates to: TSDHSCSTGFQDFMYSQGWCWLW*LLLPMG
Trigger: CCCCATTGGCAACAACAGCCACCACAGCCAGCACCA...GCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR TCA 90 bp AAAGGATGCTCTCCATTTTGGGCAACAGTAATACACCTCCTTCTCCAGACATCAGCTACTGCTGTGGCCTaGGCCAACTGCATCAGGTCT +
Preference number: 4 (lower is better)
Translates to: KGCSPFWATVIHLLLQTSATAVA*ANCIRS
Trigger: AGACCTGATGCAGTTGGCTCAGGCCACAGCAGTAGC...TGATGTCTGGAGAAGGAGGTGTATTACTGTTGCCCAAAATGGAGAGCATCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp CTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGCTGTCGTGGAAACAGTaGTGGTGGTGGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LTIHVQLVSRISCIRRALLSWKQ*WWWCWL
Trigger: CAGCCAGCACCACCACCACCACTGTTTCCACGACAG...CAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp GGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAGGATGGACTGTGCTGCAACTTaGGGCTTGGATGACTGTGCG +
Preference number: 4 (lower is better)
Translates to: GFQDFMYSQGFEQIPERMDCAAT*GLDDCA
Trigger: CGCACAGTCATCCAAGCCCCAAGTTGCAGCACAGTC...CATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR TCA 90 bp ACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCACTACTGTCAAACCTTaGTTGCCACCGTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: TSDHSCSTGFQDFMYSQGTTVKP*LPPWPC
Trigger: ACAGGGCCACGGTGGCAATCAAGGTTTGACAGTAGT...GCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR TCA 90 bp TTGGGCAACAGTAATACACCTCCTTCTCCAGACATCAATTACTCACTGATTTGGAACTTGGGGCTTGGATaGCTGTGCGTGGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: LGNSNTPPSPDINYSLIWNLGLG*LCVGGL
Trigger: CAACCCACCCACGCACAGTCATCCAAGCCCCAAGTT...CCAAATCAGTGAGTAATTGATGTCTGGAGAAGGAGGTGTATTACTGTTGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp AAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGCAGCTTGCATTAGCTaGTGGCCTGGGCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: KTSDHSCSTGFQDFMYSQAACIS*WPGPGS
Trigger: ACTCCCAGGCCCAGGCCAGCAGCTAATGCAAGCTGC...CTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp AAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGCAGGGTGCAGCTACTaGTGTGGCCTGAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: KTSDHSCSTGFQDFMYSQAGCSY*CGLSQL
Trigger: CAGTTGGCTCAGGCCACAGCAGTAGCTGCACCCTGC...CTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp TCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTTCGTCCTCAGAATCCTaGGTCTCCTCGGCGTCGCCG +
Preference number: 4 (lower is better)
Translates to: SSLSIDVIRCNLVCPKDSSSSES*VSSASP
Trigger: CGGCGACGCCGAGGAGACCCAGGATTCTGAGGACGA...AGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp GATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAGGATGCTCTCCATTTTCACTTGTCCTTGTTaGGGGCGAGGGGGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: DFMYSQGFEQIPERMLSIFTCPC*GRGGCE
Trigger: CTCACAACCCCCTCGCCCCCAACAAGGACAAGTGAA...AATGGAGAGCATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp CAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAATACCTGCTGCTGTCGTaGAAACAGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QLVSRISCIRRALNRSQKYLLLS*KQWWWW
Trigger: CCACCACCACCACTGTTTCCACGACAGCAGCAGGTA...TTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp TTGGGCAACAGTAATACACCTCCTTCTCCAGACATCAATTACTCACTGATTTGGAAGCAGCAGGTAAGGTaGGCGTGGACAGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LGNSNTPPSPDINYSLIWKQQVR*AWTEGL
Trigger: CAGGCCTTCTGTCCACGCCCACCTTACCTGCTGCTT...CCAAATCAGTGAGTAATTGATGTCTGGAGAAGGAGGTGTATTACTGTTGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp TCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAATCCCGCTTCCTCTTCTaGGAAGCAGCAGGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: STGFQDFMYSQGFEQIPESRFLF*EAAGKV
Trigger: CACCTTACCTGCTGCTTCCCAGAAGAGGAAGCGGGA...TTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp CAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAATGCTTCATCACCACCTaGGGTTGTGACTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QLVSRISCIRRALNRSQKCFITT*GCDCGW
Trigger: CCAGCCACAGTCACAACCCCAGGTGGTGATGAAGCA...TTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp GGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAGGATGTGCTTGCTACGTTTCTaGTCCACACTCTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: GFQDFMYSQGFEQIPERMCLLRF*STLSSR
Trigger: GCGTGAAGAGAGTGTGGAGCAGAAACGTAGCAAGCA...CATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp GAAACCGAACCACTCAAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTTCAGAAGGCCTGTGTGTTaGACAGCAGGTGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ETEPLKFKTSDHSCSTGFRRPVC*TAGGGG
Trigger: TCCCCCTCCACCTGCTGTGCAACACACAGGCCTTCT...GAAACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTTGAGTGGTTCGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp GGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAGGATGGGCTGTTGTTGCCAATaGGGTAAAGAGGAATCGCTG +
Preference number: 4 (lower is better)
Translates to: GFQDFMYSQGFEQIPERMGCCCQ*GKEESL
Trigger: CAGCGATTCCTCTTTACCCCATTGGCAACAACAGCC...CATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp TTGGGCAACAGTAATACACCTCCTTCTCCAGACATCAATTACTCACTGATTTGGTGGTGGTGCTGGCTGTaGTGGCTGTTGTTGCCAATG +
Preference number: 4 (lower is better)
Translates to: LGNSNTPPSPDINYSLIWWWCWL*WLLLPM
Trigger: CATTGGCAACAACAGCCACCACAGCCAGCACCACCA...CCAAATCAGTGAGTAATTGATGTCTGGAGAAGGAGGTGTATTACTGTTGCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp AAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGCTGCAACTTGGGGCTTaGATGACTGTGCGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KTSDHSCSTGFQDFMYSQLQLGA*MTVRGW
Trigger: CCACCCACGCACAGTCATCCAAGCCCCAAGTTGCAG...CTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp TTCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTTCTTCTGGCACATCCTaGGGGAGCTCAGATGCCACC +
Preference number: 4 (lower is better)
Translates to: FSFSSLSIDVIRCNLVCPSSGTS*GSSDAT
Trigger: GGTGGCATCTGAGCTCCCCCAGGATGTGCCAGAAGA...AGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp TCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAATACCTGCATCTGGGGTaGCAGTTTACTCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: STGFQDFMYSQGFEQIPEYLHLG*QFTLPL
Trigger: CAAAGGCAGAGTAAACTGTCACCCCAGATGCAGGTA...TTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR TCA 90 bp GAAACCGAACCACTCAAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTTCCCCACACTTGATGACTaGGCTGGTGGCAGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: ETEPLKFKTSDHSCSTGFPTLDD*AGGRVL
Trigger: CAAAACCCTGCCACCAGCTCAGTCATCAAGTGTGGG...GAAACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTTGAGTGGTTCGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR TCA 90 bp GGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAGGATGACGTATTCGAGTCTGTaGTGGACTTTGGACACGAAC +
Preference number: 4 (lower is better)
Translates to: GFQDFMYSQGFEQIPERMTYSSL*WTLDTN
Trigger: GTTCGTGTCCAAAGTCCATCACAGACTCGAATACGT...CATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp AAAGGATGCTCTCCATTTTGGGCAACAGTAATACACCTCCTTCTCCAGACATCACTGAGCTGCTCTTTGTaGTTGAAGAGCAGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: KGCSPFWATVIHLLLQTSLSCSL*LKSRAD
Trigger: GTCAGCTCTGCTCTTCAAGCACAAAGAGCAGCTCAG...TGATGTCTGGAGAAGGAGGTGTATTACTGTTGCCCAAAATGGAGAGCATCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp TTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATCTGCCACTCGTCCTCTaGCACCTCCTCAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FSSLSIDVIRCNLVCPKDLPLVL*HLLKRW
Trigger: CCACCTCTTGAGGAGGTGCCAGAGGACGAGTGGCAG...ATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp GATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAGGATGCTCTCCATTTTGGATGACTGTGCGTaGGTGGGTTGTGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: DFMYSQGFEQIPERMLSILDDCA*VGCASE
Trigger: TTCTGAAGCACAACCCACCCACGCACAGTCATCCAA...AATGGAGAGCATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp TGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCATGTCCAGGAGACAGTTaGGATGGAGTTGATGGACGT +
Preference number: 4 (lower is better)
Translates to: CSTGFQDFMYSQGFEQIPCPGDS*DGVDGR
Trigger: ACGTCCATCAACTCCATCCCAACTGTCTCCTGGACA...TGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR TCA 90 bp TCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAGTACAGTCACCCCTTaGGGTATCAACTGCAACTGT +
Preference number: 4 (lower is better)
Translates to: STGFQDFMYSQGFEQIPESTVTP*GINCNC
Trigger: ACAGTTGCAGTTGATACCTCAAGGGGTGACTGTACT...TTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR TCA 90 bp ACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCAATTGGAATCGGTTGTaGGGTTGTAGTCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: TSDHSCSTGFQDFMYSQGNWNRL*GCSLNL
Trigger: CAGGTTCAGACTACAACCTCACAACCGATTCCAATT...GCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR TCA 90 bp CTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGGTATTCGCAGGGCTTTaGACAGATCCCAGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: LTIHVQLVSRISCIRRALVFAGL*TDPRKD
Trigger: ATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATAC...CAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp TCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTACACAGACTTCACACTaGCACTCGTCCTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: SSLSIDVIRCNLVCPKDSTQTSH*HSSSGT
Trigger: GGTGCCAGAGGACGAGTGGCAGTGTGAAGTCTGTGT...AGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR GCA 90 bp GGCAACAGTAATACACCTCCTTCTCCAGACATCAATTACTCACTGATTTGGAGTTTCACCTGTACCTGCTaGTGTCGTGGAAACAGTGGT +
Preference number: 4 (lower is better)
Translates to: GNSNTPPSPDINYSLIWSFTCTC*CRGNSG
Trigger: ACCACTGTTTCCACGACAGCAGCAGGTACAGGTGAA...ACTCCAAATCAGTGAGTAATTGATGTCTGGAGAAGGAGGTGTATTACTGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp CAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAATTGTTCACCTGTACCTaGTGCTGTCGTGGAAACAGT +
Preference number: 4 (lower is better)
Translates to: QLVSRISCIRRALNRSQKLFTCT*CCRGNS
Trigger: ACTGTTTCCACGACAGCAGCAGGTACAGGTGAACAA...TTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp TCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAGCTTAGTGGCATTCTaGTTGCTACGTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: STGFQDFMYSQGFEQIPESLVAF*LLRFCS
Trigger: GGAGCAGAAACGTAGCAAGCAGAATGCCACTAAGCT...TTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp TCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTATGCCACCTTCTTCTCTaGCATGTTGCTGCTATCGGG +
Preference number: 4 (lower is better)
Translates to: SPFLLFQLMSSGVTWYVLCHLLL*HVAAIG
Trigger: CCCGATAGCAGCAACATGGCAGAGAAGAAGGTGGCA...TAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp TCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTATTTCCGTGCAGTAACTaGCGTCGTCGTCGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: SPFLLFQLMSSGVTWYVLFPCSN*RRRRRL
Trigger: AAGACGACGACGACGACGCCAGTTACTGCACGGAAA...TAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp TCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAGTGTGCACTGCTCTTaGCTCACCAGAGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: SPFLLFQLMSSGVTWYVLSVHCS*LTRAAQ
Trigger: TTGTGCAGCTCTGGTGAGCCAAGAGCAGTGCACACT...TAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp ACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCGCTTCAGAAGGGACATaGGATGAAACAGTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: TSDHSCSTGFQDFMYSQGASEGT*DETVVW
Trigger: CCAAACAACTGTTTCATCCCATGTCCCTTCTGAAGC...GCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp ACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCGGATGCTCTCCATTTTaGGCAACAGTAATACACCTC +
Preference number: 4 (lower is better)
Translates to: TSDHSCSTGFQDFMYSQGGCSPF*ATVIHL
Trigger: GAGGTGTATTACTGTTGCCCAAAATGGAGAGCATCC...GCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
3UTR CAA 72 bp CAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTaGAACAGATCCCAGAAAGGATGCTCTCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: QLVSRISCIRRA*NRSQKGCSPFW
Trigger: CCAAAATGGAGAGCATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR TCA 90 bp TTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATCATGCATCTCTGCCATaGGTGTGCACTGCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: FSSLSIDVIRCNLVCPKDHASLP*VCTALG
Trigger: GCCAAGAGCAGTGCACACTCATGGCAGAGATGCATG...ATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp TTGGGCAACAGTAATACACCTCCTTCTCCAGACATCAATTACTCACTGATTTGGAGAAGGGACATGGGATaGAACAGTTGTTTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LGNSNTPPSPDINYSLIWRRDMG*NSCLGL
Trigger: CAGACCCAAACAACTGTTTCATCCCATGTCCCTTCT...CCAAATCAGTGAGTAATTGATGTCTGGAGAAGGAGGTGTATTACTGTTGCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp CCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGTTGGCTCACCAGAGCTaGACAAAAGTCCTCAAAGCG +
Preference number: 4 (lower is better)
Translates to: PFLLFQLMSSGVTWYVLKLAHQS*TKVLKA
Trigger: CGCTTTGAGGACTTTTGTGCAGCTCTGGTGAGCCAA...CTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR GCA 90 bp TTCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTCACAACATGCATCTCTaGCATGAGTGTGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: FSFSSLSIDVIRCNLVCPHNMHL*HECALL
Trigger: GAGCAGTGCACACTCATGGCAGAGATGCATGTTGTG...AGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR GCA 90 bp TTCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTACCAGGCACCTTGTGTaGTACACAGACTTCACACTG +
Preference number: 4 (lower is better)
Translates to: FSFSSLSIDVIRCNLVCPTRHLV*YTDFTL
Trigger: CAGTGTGAAGTCTGTGTAGCACACAAGGTGCCTGGT...AGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR GCA 90 bp AAGAAACCGAACCACTCAAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTTTTGGCATTGCAGCTTaGATTAGCTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KKPNHSNSKPLTIHVQLVFGIAA*ISCWPG
Trigger: CCCAGGCCAGCAGCTAATGCAAGCTGCAATGCCAAA...AACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTTGAGTGGTTCGGTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp CAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAGGTGACAGTTTACTCTaGCTTTGTTCACCTGTACCT +
Preference number: 4 (lower is better)
Translates to: QLVSRISCIRRALNRSQKGDSLL*LCSPVP
Trigger: AGGTACAGGTGAACAAAGGCAGAGTAAACTGTCACC...TTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp AGCGTCAATGGTAAGAATATCACATGCAAGACCATGGATGAAACATTACTCTTATGCGTGGGTGGGTTGTaGTTCAGAAGGGACATGGGA +
Preference number: 4 (lower is better)
Translates to: SVNGKNITCKTMDETLLLCVGGL*FRRDMG
Trigger: TCCCATGTCCCTTCTGAAGCACAACCCACCCACGCA...TAAGAGTAATGTTTCATCCATGGTCTTGCATGTGATATTCTTACCATTGACGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp AAGAAACCGAACCACTCAAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTTTGAGGCTGAGACTGTaGTGCAACTTGGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KKPNHSNSKPLTIHVQLVLRLRL*CNLGLG
Trigger: TCCAAGCCCCAAGTTGCAGCACAGTCTCAGCCTCAA...AACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTTGAGTGGTTCGGTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp AAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGATCTCGGCTCTGAGCTaGTCTTTGTGCTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KTSDHSCSTGFQDFMYSQISALS*SLCLKS
Trigger: GCTCTTCAAGCACAAAGAGCAGCTCAGAGCCGAGAT...CTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp AAAGGATGCTCTCCATTTTGGGCAACAGTAATACACCTCCTTCTCCAGACATCATCCTGCACTTCAATTTaGAGATCCTTGTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: KGCSPFWATVIHLLLQTSSCTSI*RSLSRS
Trigger: ACTCCTGGACAAGGATCTGCAAATTGAAGTGCAGGA...TGATGTCTGGAGAAGGAGGTGTATTACTGTTGCCCAAAATGGAGAGCATCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp CCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGTCTCTGCCATGTTGCTaGTATCGGGGGTTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PFLLFQLMSSGVTWYVLKSLPCC*YRGFLR
Trigger: TCTCAGAAACCCCCGATAGCAGCAACATGGCAGAGA...CTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR GCA 90 bp TTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATCTGGGGGAGCTCAGATaGCACCTTCTTCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: FSSLSIDVIRCNLVCPKDLGELR*HLLLCH
Trigger: ATGGCAGAGAAGAAGGTGGCATCTGAGCTCCCCCAG...ATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp TCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAGGCCGATGTACTCTTaGTTTTCGCCTACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SPFLLFQLMSSGVTWYVLRPMYS*FSPTWS
Trigger: ACTCCAGGTAGGCGAAAACCAAGAGTACATCGGCCT...TAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp CCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGCTCTACTGGTCCATATaGGTAGTCCTCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PFLLFQLMSSGVTWYVLKLYWSI*VVLCLL
Trigger: CAAGAGGCAGAGGACTACCCATATGGACCAGTAGAG...CTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp CAGGGCTTTGAACAGATCCCAGAAAGGATGCTCTCCATTTTGGGCAACAGTAATCTCTTCTCTTTCAGCTaGAGTCATGCTCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: QGFEQIPERMLSILGNSNLFSFS*SHALFL
Trigger: CAGAAAAAGAGCATGACTCCAGCTGAAAGAGAAGAG...ATTACTGTTGCCCAAAATGGAGAGCATCCTTTCTGGGATCTGTTCAAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR TCA 90 bp TCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTCCAATTTGCCCTATGTaGTGCCCAGTTGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: SSLSIDVIRCNLVCPKDSPICPM*CPVGMK
Trigger: CTTCATCCCAACTGGGCATCACATAGGGCAAATTGG...AGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp CTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGGTAAAGAGGAATCGCTaGACAGTACCATTTGGCATT +
Preference number: 4 (lower is better)
Translates to: LTIHVQLVSRISCIRRALVKRNR*TVPFGI
Trigger: AATGCCAAATGGTACTGTTCAGCGATTCCTCTTTAC...CAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR TCA 90 bp AAGAAACCGAACCACTCAAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTCAGTTGGGATGGAGTTaGTGGACGTATTCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: KKPNHSNSKPLTIHVQLVQLGWS*WTYSSL
Trigger: CAGACTCGAATACGTCCATCAACTCCATCCCAACTG...AACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTTGAGTGGTTCGGTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR TCA 90 bp GAAACCGAACCACTCAAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTTCTGTGAGGTTGTAGTCTaGACCTGGGATTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: ETEPLKFKTSDHSCSTGFCEVVV*TWDCCP
Trigger: TGGACAACAATCCCAGGTTCAGACTACAACCTCACA...GAAACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTTGAGTGGTTCGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR TCA 90 bp CTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGCTTTTTCTTGGACTTTaGGCTGGAGTCTTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LTIHVQLVSRISCIRRALLFLGL*AGVFFL
Trigger: GAGGAAAAAGACTCCAGCTCAAAGTCCAAGAAAAAG...CAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp AAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGTGTGGTGGCTGTTGTTaGCAATGGGGTAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KTSDHSCSTGFQDFMYSQCGGCC*QWGKEE
Trigger: TTCCTCTTTACCCCATTGGCAACAACAGCCACCACA...CTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp GAAACCGAACCACTCAAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTTCATCCTTGTCCAGGAGTaGTCTCTTCTTCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: ETEPLKFKTSDHSCSTGFILVQE*SLLQDL
Trigger: GAGATCCTGAAGAAGAGAGCACTCCTGGACAAGGAT...GAAACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTTGAGTGGTTCGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp TCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAATCTATTACAGCATTATaGTTCATCACCACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: STGFQDFMYSQGFEQIPESITAL*FITTWG
Trigger: ACCCCAGGTGGTGATGAAGCATAATGCTGTAATAGA...TTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp TCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTAATCCTCAGAGGACTTaGGAAATTCAAGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SSLSIDVIRCNLVCPKDSNPQRT*EIQGAG
Trigger: TCCCGCCCCTTGAATTTCCCAAGTCCTCTGAGGATT...AGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp CTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTCCACCTCCTCAAGAGGTaGCTTCACACATTCCAAATG +
Preference number: 4 (lower is better)
Translates to: LLFQLMSSGVTWYVLKILHLLKR*LHTFQM
Trigger: CATTTGGAATGTGTGAAGCCACCTCTTGAGGAGGTG...GAGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp AAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATCAGGTAAGGTGGGCGTaGACAGAAGGCCTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: KFKTSDHSCSTGFQDFMYQVRWA*TEGLCV
Trigger: AACACACAGGCCTTCTGTCCACGCCCACCTTACCTG...ATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp TTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATCTTGTTAGGTTCTTCTaGCACATCCTGGGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: FSSLSIDVIRCNLVCPKDLVRFF*HILGEL
Trigger: GAGCTCCCCCAGGATGTGCCAGAAGAACCTAACAAG...ATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp TTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATGGTGATGATTCGAGTTaGGCCAGATGCTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: FSSLSIDVIRCNLVCPKDGDDSS*ARCSFS
Trigger: GGAAAAGGAGCATCTGGCTCAACTCGAATCATCACC...ATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp TGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCACAAATTCAAAACCTCTaGCCATTCATGTTCAACTGG +
Preference number: 4 (lower is better)
Translates to: CSTGFQDFMYSQGFEQIPQIQNL*PFMFNW
Trigger: CCAGTTGAACATGAATGGTCAGAGGTTTTGAATTTG...TGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR GCA 90 bp TTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTTTATTTGCTTCATGTaGAGCGGCTGCCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: FSSLSIDVIRCNLVCPKDFICFM*SGCHLL
Trigger: CAGCAGGTGGCAGCCGCTGCACATGAAGCAAATAAA...ATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR GCA 90 bp TTCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTTCCTCAGATTTTCCTTaGTCAGGGTCATCATCTGGT +
Preference number: 4 (lower is better)
Translates to: FSFSSLSIDVIRCNLVCPSSDFP*SGSSSG
Trigger: ACCAGATGATGACCCTGAGCAAGGAAAATCTGAGGA...AGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR GCA 90 bp TTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTTCTCTGCCATGTTaGTGCTATCGGGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: FSSLSIDVIRCNLVCPKDSSLPC*CYRGFL
Trigger: CAGAAACCCCCGATAGCAGCAACATGGCAGAGAAGA...ATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR GCA 90 bp CTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTCTTCAGGATCATCAGCTaGCTTAGCAGATTCACTCTG +
Preference number: 4 (lower is better)
Translates to: LLFQLMSSGVTWYVLKILFRIIS*LSRFTL
Trigger: CAGAGTGAATCTGCTAAGGCAGCTGATGATCCTGAA...GAGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp TTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTGGTTTTCGCCTACCTaGAGTGCTGCTGTAGGTACT +
Preference number: 4 (lower is better)
Translates to: FSSLSIDVIRCNLVCPKDWFSPT*SAAVGT
Trigger: AGTACCTACAGCAGCACTCCAGGTAGGCGAAAACCA...ATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp AAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATATGACTGTGCGTGGGTaGGTTGTGCTTCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: KFKTSDHSCSTGFQDFMYMTVRG*VVLQKG
Trigger: TCCCTTCTGAAGCACAACCCACCCACGCACAGTCAT...ATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp AAGAAACCGAACCACTCAAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTGTCTGTGATGGACTTTaGACACGAACAGGAGACTGT +
Preference number: 4 (lower is better)
Translates to: KKPNHSNSKPLTIHVQLVVCDGL*TRTGDC
Trigger: ACAGTCTCCTGTTCGTGTCCAAAGTCCATCACAGAC...AACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTTGAGTGGTTCGGTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CCA 90 bp TTCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTATCCCCAACTTCTGTTaGCTCCTCAGATTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: FSFSSLSIDVIRCNLVCPIPNFC*LLRFSL
Trigger: CAAGGAAAATCTGAGGAGCCAACAGAAGTTGGGGAT...AGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp CTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTCTTTTCCAGATTAGGCTaGATGGAGGTAGTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LLFQLMSSGVTWYVLKILFSRLG*MEVVVA
Trigger: TGCTACCACTACCTCCATCCAGCCTAATCTGGAAAA...GAGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp CCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGAAATCCCCAAGTTTGTaGCAAACCCTACAATGGTCA +
Preference number: 4 (lower is better)
Translates to: PFLLFQLMSSGVTWYVLKKSPSL*QTLQWS
Trigger: TGACCATTGTAGGGTTTGTCACAAACTTGGGGATTT...CTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp TTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTGCTGGCTCTTCAGCTaGCTAAGTTTGCTATCTGGA +
Preference number: 4 (lower is better)
Translates to: FSSLSIDVIRCNLVCPKDCWLFS*LSLLSG
Trigger: TCCAGATAGCAAACTTAGTCAGCTGAAGAGCCAGCA...ATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp AAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGAGAGATGTATGTGGTTaGATTGGAATCGGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: KTSDHSCSTGFQDFMYSQRDVCG*IGIGCE
Trigger: CTCACAACCGATTCCAATTCAACCACATACATCTCT...CTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR TCA 90 bp TCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTGTCGCCAAGATTTGCTaGCACAGAGTTACCTTTATC +
Preference number: 4 (lower is better)
Translates to: SSLSIDVIRCNLVCPKDSVAKIC*HRVTFI
Trigger: GATAAAGGTAACTCTGTGTCAGCAAATCTTGGCGAC...AGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp TCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAGGGACTAGTCTCTTCTaGAGTTGCATTTGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: SPFLLFQLMSSGVTWYVLGTSLF*SCICCV
Trigger: AACACAACAAATGCAACTTCAGAAGAGACTAGTCCC...TAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR GCA 90 bp TCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTATATGGGTAGTCCTCTaGCTCTTGGTAAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SSLSIDVIRCNLVCPKDSIWVVL*LLVRKN
Trigger: GTTCTTCCTTACCAAGAGGCAGAGGACTACCCATAT...AGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp TTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATCTCAGGGTCATCATCTaGTGTTTTGTCGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: FSSLSIDVIRCNLVCPKDLRVII*CFVVTV
Trigger: GACAGTGACGACAAAACACCAGATGATGACCCTGAG...ATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp TCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTATCATCCGGTGTAACCTaGTATGTCCTAAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: SPFLLFQLMSSGVTWYVLSSGVT*YVLKIL
Trigger: GAGAATCTTTAGGACATACCAGGTTACACCGGATGA...TAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp TTCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTGAAACTGTAGAACTTTaGTCTTGTTCTCTACTGGTC +
Preference number: 4 (lower is better)
Translates to: FSFSSLSIDVIRCNLVCPETVEL*SCSLLV
Trigger: GACCAGTAGAGAACAAGATCAAAGTTCTACAGTTTC...AGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp TCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTCAAATGGTATACTGCTaGACATGTCTCACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SSLSIDVIRCNLVCPKDSQMVYC*TCLTAK
Trigger: CTTTGCTGTGAGACATGTTCAGCAGTATACCATTTG...AGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp CCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGTGGACTTCTCCGATTTaGAATCACCTACTATCTCTT +
Preference number: 4 (lower is better)
Translates to: PFLLFQLMSSGVTWYVLKWTSPI*NHLLSL
Trigger: AAGAGATAGTAGGTGATTTCAAATCGGAGAAGTCCA...CTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR GCA 90 bp CTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTCATAATCTCAAAACAGTaGCAAAGTTCCGCAGTACCT +
Preference number: 4 (lower is better)
Translates to: LLFQLMSSGVTWYVLKILIISKQ*QSSAVP
Trigger: AGGTACTGCGGAACTTTGGCACTGTTTTGAGATTAT...GAGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR GCA 90 bp TCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTTTCAAAAGCACAACATaGATCTCTGCCATGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SSLSIDVIRCNLVCPKDSFKSTT*ISAMSV
Trigger: CACACTCATGGCAGAGATGCATGTTGTGCTTTTGAA...AGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp TCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAACTAAGTTTGCTATCTaGATTCCGCAATCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SPFLLFQLMSSGVTWYVLTKFAI*IPQSGD
Trigger: ATCACCAGATTGCGGAATCCAGATAGCAAACTTAGT...TAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp CTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTCCCTCGTAAATGGCAATaGCATTCATTATATGCTCAT +
Preference number: 4 (lower is better)
Translates to: LLFQLMSSGVTWYVLKILPRKWQ*HSLYAH
Trigger: ATGAGCATATAATGAATGTCATTGCCATTTACGAGG...GAGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp TCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTATATCTTCTTCTATTATaGGTCTTCGGTTCAAGAACC +
Preference number: 4 (lower is better)
Translates to: SPFLLFQLMSSGVTWYVLYLLLL*VFGSRT
Trigger: GGTTCTTGAACCGAAGACTCATAATAGAAGAAGATA...TAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR GCA 90 bp TCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTTTCTTCACGCAGAACTaGTTTCAAAAGCACAACATG +
Preference number: 4 (lower is better)
Translates to: SSLSIDVIRCNLVCPKDSFFTQN*FQKHNM
Trigger: CATGTTGTGCTTTTGAAAGCAGTTCTGCGTGAAGAA...AGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp TCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTATCTTTTTCAAGGGACTaGTCTTCAAATTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SPFLLFQLMSSGVTWYVLSFSRD*SSNSSL
Trigger: CAGAGAAGAATTTGAAGACCAGTCCCTTGAAAAAGA...TAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR GCA 90 bp TTCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAGAATTTAGTTCACTaGTGCTGTTACTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: FSFSSLSIDVIRCNLVCPKNLVH*CCYCFP
Trigger: TGGAAAACAGTAACAGCAGCAGTGAACTAAATTCTT...AGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp TCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTTTCACACATTCCAAATaGTATACTGCTGAACATGTC +
Preference number: 4 (lower is better)
Translates to: SSLSIDVIRCNLVCPKDSFTHSK*YTAEHV
Trigger: GACATGTTCAGCAGTATACCATTTGGAATGTGTGAA...AGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR TCA 90 bp TTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATATAGAGACAGGTGTATaGGATTCTCTTTCTCCATTT +
Preference number: 4 (lower is better)
Translates to: FSSLSIDVIRCNLVCPKDIETGV*DSLSPF
Trigger: AAATGGAGAAAGAGAATCTCATACACCTGTCTCTAT...ATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CCA 90 bp AAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATCTGAAGAGATGTATGTaGTTGAATTGGAATCGGTTG +
Preference number: 4 (lower is better)
Translates to: KFKTSDHSCSTGFQDFMYLKRCM*LNWNRL
Trigger: CAACCGATTCCAATTCAACCACATACATCTCTTCAG...ATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS GCA 90 bp GTGGTCAGGGAGTCTGTCACTGTCGTGGTGACCACGGTTTTGCTCTaGTCCTTTACAGAGATGATGTCCACACTGCCGCCTGTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: VVRESVTVVVTTVLL*SFTEMMSTLPPVEG
Trigger: ACCCTCCACAGGCGGCAGTGTGGACATCATCTCTGTAAAGGAGCAGAGCAAAACCGTGGTCACCACGACAGTGACAGACTCCCTGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS TCA 90 bp CTGGGGCACACCACTTTGCTGAGCCTGTATCTGAGCCACAACCTGTaGCTGGATCTGAGAGAGAACCTGGACTTGTTGTTGCAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LGHTTLLSLYLSHNL*LDLRENLDLLLQLR
Trigger: CCTCAGCTGCAACAACAAGTCCAGGTTCTCTCTCAGATCCAGTCACAGGTTGTGGCTCAGATACAGGCTCAGCAAAGTGGTGTGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000644067.1
CDS TCA 90 bp GCCAGTTTGCTTGGGCGTTTCTGGTCTCTTTGGCCGCAGTGCACTTaGTCGAAGGCCTTTCCTCTGAGGTGTAGGCGTTTCTTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: ASLLGRFWSLWPQCT*SKAFPLRCRRFFWC
Trigger: ACACCAAAAGAAACGCCTACACCTCAGAGGAAAGGCCTTCGATCAAGTGCACTGCGGCCAAAGAGACCAGAAACGCCCAAGCAAACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000582467.1
ENST00000644067.1
CDS TCA 90 bp TCTGAGAGAGAACCTGGACTTGTTGTTGCAGCTGAGGCACAGCAATaGCTTGGGGCTGTGGCTGCTGTATTTGTAGCTGAGGACGGGATG +
Preference number: 5 (lower is better)
Translates to: SEREPGLVVAAEAQQ*LGAVAAVFVAEDGM
Trigger: CATCCCGTCCTCAGCTACAAATACAGCAGCCACAGCCCCAAGTCATTGCTGTGCCTCAGCTGCAACAACAAGTCCAGGTTCTCTCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000644067.1
CDS GCA 90 bp CGTGGAAACAGTGGTGGTGGTGGTGCTGGCTGTGGTGGCTGTTGTTaGCAATGGGGTAAAGAGGAATCGCTGAACAGTACCATTTGGCAT +
Preference number: 5 (lower is better)
Translates to: RGNSGGGGAGCGGCC*QWGKEESLNSTIWH
Trigger: ATGCCAAATGGTACTGTTCAGCGATTCCTCTTTACCCCATTGGCAACAACAGCCACCACAGCCAGCACCACCACCACCACTGTTTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000580465.5
ENST00000582406.1
ENST00000584931.1
ENST00000644067.1
CDS TCA 90 bp CTGGCTGTGGTGGCTGTTGTTGCCAATGGGGTAAAGAGGAATCGCTaGACAGTACCATTTGGCATTGCAGCTTGCATTAGCTGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: LAVVAVVANGVKRNR*TVPFGIAACISCWP
Trigger: AGGCCAGCAGCTAATGCAAGCTGCAATGCCAAATGGTACTGTTCAGCGATTCCTCTTTACCCCATTGGCAACAACAGCCACCACAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000580465.5
ENST00000584931.1
ENST00000644067.1
CDS TCA 90 bp CTGAGCTGGTGGCAGGGTTTTGTCTTGATGTACCTGCATCTGGGGTaGCAGTTTACTCTGCCTTTGTTCACCTGTACCTGCTGCTGTCGT +
Preference number: 5 (lower is better)
Translates to: LSWWQGFVLMYLHLG*QFTLPLFTCTCCCR
Trigger: ACGACAGCAGCAGGTACAGGTGAACAAAGGCAGAGTAAACTGTCACCCCAGATGCAGGTACATCAAGACAAAACCCTGCCACCAGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000580465.5
ENST00000644067.1
CDS TCA 90 bp CAGGATCTCGGCTCTGAGCTGCTCTTTGTGCTTGAAGAGCAGAGCTaGCAGCTTAGTGGCATTCTGCTTGCTACGTTTCTGCTCCACACT +
Preference number: 5 (lower is better)
Translates to: QDLGSELLFVLEEQS*QLSGILLATFLLHT
Trigger: AGTGTGGAGCAGAAACGTAGCAAGCAGAATGCCACTAAGCTGTCAGCTCTGCTCTTCAAGCACAAAGAGCAGCTCAGAGCCGAGATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000580465.5
ENST00000581258.5
ENST00000644067.1
CDS GCA 90 bp TTTTTGGATTTCAGCAACACAGTCAGTCACACCAGGCACCTTGTGTaGTACACAGACTTCACACTGCCACTCGTCCTCTGGCACCTCCTC +
Preference number: 5 (lower is better)
Translates to: FLDFSNTVSHTRHLV*YTDFTLPLVLWHLL
Trigger: GAGGAGGTGCCAGAGGACGAGTGGCAGTGTGAAGTCTGTGTAGCACACAAGGTGCCTGGTGTGACTGACTGTGTTGCTGAAATCCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS GCA 90 bp ATCCCTGAGTTGCTGAACCCTTTGCAACTGCTCTTGCACACTGGCTaGCTGCACTGTAACCACATTCTGAATCTGGTGAGTCTGCACAGC +
Preference number: 5 (lower is better)
Translates to: IPELLNPLQLLLHTG*LHCNHILNLVSLHS
Trigger: GCTGTGCAGACTCACCAGATTCAGAATGTGGTTACAGTGCAGGCAGCCAGTGTGCAAGAGCAGTTGCAAAGGGTTCAGCAACTCAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000644067.1
CDS GCA 90 bp TCCTTGTCCAGGAGTGCTCTCTTCTTCAGGATCTCGGCTCTGAGCTaGTCTTTGTGCTTGAAGAGCAGAGCTGACAGCTTAGTGGCATTC +
Preference number: 5 (lower is better)
Translates to: SLSRSALFFRISALS*SLCLKSRADSLVAF
Trigger: GAATGCCACTAAGCTGTCAGCTCTGCTCTTCAAGCACAAAGAGCAGCTCAGAGCCGAGATCCTGAAGAAGAGAGCACTCCTGGACAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000580465.5
ENST00000581258.5
ENST00000644067.1
CDS TCA 90 bp TCTGGTCTCTTTGGCCGCAGTGCACTTGATCGAAGGCCTTTCCTCTaGGGTGTAGGCGTTTCTTTTGGTGTTTCTGGAACTCCAATGGGA +
Preference number: 5 (lower is better)
Translates to: SGLFGRSALDRRPFL*GVGVSFGVSGTPMG
Trigger: TCCCATTGGAGTTCCAGAAACACCAAAAGAAACGCCTACACCTCAGAGGAAAGGCCTTCGATCAAGTGCACTGCGGCCAAAGAGACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000582467.1
ENST00000644067.1
CDS TCA 90 bp CTGAGCTGGTGGCAGGGTTTTGTCTTGATGTACCTGCATCTGGGGTaGCAGTTTACTCTGCCTTTGTTCACCTGTACTGGCTTGAGGCAT +
Preference number: 5 (lower is better)
Translates to: LSWWQGFVLMYLHLG*QFTLPLFTCTGLRH
Trigger: ATGCCTCAAGCCAGTACAGGTGAACAAAGGCAGAGTAAACTGTCACCCCAGATGCAGGTACATCAAGACAAAACCCTGCCACCAGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582406.1
CDS-3UTR CAA 90 bp ACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCCATGGTGAGCTTCACTaGTCCTTGTTGGGGGCGAGG +
Preference number: 5 (lower is better)
Translates to: TSDHSCSTGFQDFMYSQGHGELH*SLLGAR
Trigger: CCTCGCCCCCAACAAGGACAAGTGAAGCTCACCATG...GCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp TCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAGCTGCAACTTGGGGCTaGGATGACTGTGCGTGGGTG +
Preference number: 5 (lower is better)
Translates to: STGFQDFMYSQGFEQIPEAATWG*DDCAWV
Trigger: CACCCACGCACAGTCATCCAAGCCCCAAGTTGCAGC...TTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS TCA 90 bp CTTCACGCAGAACTGCTTTCAAAAGCACAACATGCATCTCTGCCATaGGTGTGCACTGCTCTTGGCTCACCAGAGCTGCACAAAAGTCCT +
Preference number: 5 (lower is better)
Translates to: LHAELLSKAQHASLP*VCTALGSPELHKSP
Trigger: AGGACTTTTGTGCAGCTCTGGTGAGCCAAGAGCAGTGCACACTCATGGCAGAGATGCATGTTGTGCTTTTGAAAGCAGTTCTGCGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS GCA 90 bp CTTCAGCTCTTCCTGCACTTCAATTTGCAGATCCTTGTCCAGGAGTaGTCTCTTCTTCAGGATCTCGGCTCTGAGCTGCTCTTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: LQLFLHFNLQILVQE*SLLQDLGSELLFVL
Trigger: AAGCACAAAGAGCAGCTCAGAGCCGAGATCCTGAAGAAGAGAGCACTCCTGGACAAGGATCTGCAAATTGAAGTGCAGGAAGAGCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000580465.5
ENST00000581258.5
ENST00000644067.1
CDS TCA 90 bp TTATTTGCTTCATGTGCAGCGGCTGCCACCTGCTGGCTCTTCAGCTaGCTAAGTTTGCTATCTGGATTCCGCAATCTGGTGATGATTCGA +
Preference number: 5 (lower is better)
Translates to: LFASCAAAATCWLFS*LSLLSGFRNLVMIR
Trigger: TCGAATCATCACCAGATTGCGGAATCCAGATAGCAAACTTAGTCAGCTGAAGAGCCAGCAGGTGGCAGCCGCTGCACATGAAGCAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000579173.1
ENST00000644067.1
CDS GCA 90 bp GTCTTCTTCACGCAGAACTGCTTTCAAAAGCACAACATGCATCTCTaGCATGAGTGTGCACTGCTCTTGGCTCACCAGAGCTGCACAAAA +
Preference number: 5 (lower is better)
Translates to: VFFTQNCFQKHNMHL*HECALLLAHQSCTK
Trigger: TTTTGTGCAGCTCTGGTGAGCCAAGAGCAGTGCACACTCATGGCAGAGATGCATGTTGTGCTTTTGAAAGCAGTTCTGCGTGAAGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS GCA 90 bp TTGGAAGTGTCTTCTTCACGCAGAACTGCTTTCAAAAGCACAACATaGATCTCTGCCATGAGTGTGCACTGCTCTTGGCTCACCAGAGCT +
Preference number: 5 (lower is better)
Translates to: LEVSSSRRTAFKSTT*ISAMSVHCSWLTRA
Trigger: AGCTCTGGTGAGCCAAGAGCAGTGCACACTCATGGCAGAGATGCATGTTGTGCTTTTGAAAGCAGTTCTGCGTGAAGAAGACACTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS GCA 90 bp GAAGACTGTATATTTGAAGTGGACGTTGCTGAAGTTAAGCTTTTCTaGCCAGGTGTTGAGGAAACCGTGTTAGGGGCGGAGACTGCAGTG +
Preference number: 5 (lower is better)
Translates to: EDCIFEVDVAEVKLF*PGVEETVLGAETAV
Trigger: CACTGCAGTCTCCGCCCCTAACACGGTTTCCTCAACACCTGGGCAGAAAAGCTTAACTTCAGCAACGTCCACTTCAAATATACAGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000577770.1
ENST00000644067.1
CDS-3UTR CAA 90 bp GATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAGGATGCTCTCCATTTGGCAGGGTTTTGTCTaGATGTACCTGCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: DFMYSQGFEQIPERMLSIWQGFV*MYLHLG
Trigger: CCCCAGATGCAGGTACATCAAGACAAAACCCTGCCA...AATGGAGAGCATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp CAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAACTGAACCTGGGATTGTaGTCCAGGAGACAGTTGGGA +
Preference number: 5 (lower is better)
Translates to: QLVSRISCIRRALNRSQKLNLGL*SRRQLG
Trigger: TCCCAACTGTCTCCTGGACAACAATCCCAGGTTCAG...TTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp GGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAGGATGAGTCTGAACCTGGGATaGTTGTCCAGGAGACAGTTG +
Preference number: 5 (lower is better)
Translates to: GFQDFMYSQGFEQIPERMSLNLG*LSRRQL
Trigger: CAACTGTCTCCTGGACAACAATCCCAGGTTCAGACT...CATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS GCA 90 bp AGCAGGTCCAAAGGTAGTATTGGAAGTGTCTTCTTCACGCAGAACTaGTTTCAAAAGCACAACATGCATCTCTGCCATGAGTGTGCACTG +
Preference number: 5 (lower is better)
Translates to: SRSKGSIGSVFFTQN*FQKHNMHLCHECAL
Trigger: CAGTGCACACTCATGGCAGAGATGCATGTTGTGCTTTTGAAAGCAGTTCTGCGTGAAGAAGACACTTCCAATACTACCTTTGGACCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS-3UTR CAA 90 bp TCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTGAGTGTGCACTGCTCTaGGCTCACCAGAGCTGCACA +
Preference number: 5 (lower is better)
Translates to: SSLSIDVIRCNLVCPKDSECALL*AHQSCT
Trigger: TGTGCAGCTCTGGTGAGCCAAGAGCAGTGCACACTC...AGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp TTGGGCAACAGTAATACACCTCCTTCTCCAGACATCAATTACTCACTGATTTGGTACTACTGTCAAACCTaGATTGCCACCGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LGNSNTPPSPDINYSLIWYYCQT*IATVAL
Trigger: CAGGGCCACGGTGGCAATCAAGGTTTGACAGTAGTA...CCAAATCAGTGAGTAATTGATGTCTGGAGAAGGAGGTGTATTACTGTTGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp AAAGGATGCTCTCCATTTTGGGCAACAGTAATACACCTCCTTCTCCAGACATCAGAGTACAGTCACCCCTaGAGGTATCAACTGCAACTG +
Preference number: 5 (lower is better)
Translates to: KGCSPFWATVIHLLLQTSEYSHP*RYQLQL
Trigger: CAGTTGCAGTTGATACCTCAAGGGGTGACTGTACTC...TGATGTCTGGAGAAGGAGGTGTATTACTGTTGCCCAAAATGGAGAGCATCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS TCA 90 bp CACCTCCTCAAGAGGTGGCTTCACACATTCCAAATGGTATACTGCTaGACATGTCTCACAGCAAAGCAAATCCCCAAGTTTGTGACAAAC +
Preference number: 5 (lower is better)
Translates to: HLLKRWLHTFQMVYC*TCLTAKQIPKFVTN
Trigger: GTTTGTCACAAACTTGGGGATTTGCTTTGCTGTGAGACATGTTCAGCAGTATACCATTTGGAATGTGTGAAGCCACCTCTTGAGGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS-3UTR CAA 90 bp CCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGAAATCCTCAGAGGACTaGGGAAATTCAAGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: PFLLFQLMSSGVTWYVLKKSSED*GNSRGG
Trigger: CCCGCCCCTTGAATTTCCCAAGTCCTCTGAGGATTT...CTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp GGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAGGATGCATGGGATGAAACAGTaGTTTGGGTCTGAACTTCAG +
Preference number: 5 (lower is better)
Translates to: GFQDFMYSQGFEQIPERMHGMKQ*FGSELQ
Trigger: CTGAAGTTCAGACCCAAACAACTGTTTCATCCCATG...CATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp AAAGGATGCTCTCCATTTTGGGCAACAGTAATACACCTCCTTCTCCAGACATCAACAGTTGGGATGGAGTaGATGGACGTATTCGAGTCT +
Preference number: 5 (lower is better)
Translates to: KGCSPFWATVIHLLLQTSTVGME*MDVFES
Trigger: AGACTCGAATACGTCCATCAACTCCATCCCAACTGT...TGATGTCTGGAGAAGGAGGTGTATTACTGTTGCCCAAAATGGAGAGCATCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp GATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAGGATGCTCTCCATTTCAATTTGCAGATCCTaGTCCAGGAGTGCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: DFMYSQGFEQIPERMLSISICRS*SRSALF
Trigger: GAAGAGAGCACTCCTGGACAAGGATCTGCAAATTGA...AATGGAGAGCATCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp CTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGTGTATTCGCAGGGCTTaGAACAGATCCCAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: LTIHVQLVSRISCIRRALCIRRA*NRSQKG
Trigger: TCCTTTCTGGGATCTGTTCAAAGCCCTGCGAATACA...CAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS TCA 90 bp AACCACAGTTTGCTTATCGCCTTTTTCTACCTTGATCACAGTTTTTaGTTCTGTGGCCACTGTGGAGGTCATCGTGGTGACTTCTGTGAT +
Preference number: 5 (lower is better)
Translates to: NHSLLIAFFYLDHSF*FCGHCGGHRGDFCD
Trigger: ATCACAGAAGTCACCACGATGACCTCCACAGTGGCCACAGAATCAAAAACTGTGATCAAGGTAGAAAAAGGCGATAAGCAAACTGTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS TCA 90 bp TTTCTGTGGAAGAAACCACAGTTTGCTTATCGCCTTTTTCTACCTTaGTCACAGTTTTTGATTCTGTGGCCACTGTGGAGGTCATCGTGG +
Preference number: 5 (lower is better)
Translates to: FLWKKPQFAYRLFLP*SQFLILWPLWRSSW
Trigger: CCACGATGACCTCCACAGTGGCCACAGAATCAAAAACTGTGATCAAGGTAGAAAAAGGCGATAAGCAAACTGTGGTTTCTTCCACAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS-3UTR CAA 90 bp TTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATGAGGCCGATGTACTCTaGGTTTTCGCCTACCTGGAG +
Preference number: 5 (lower is better)
Translates to: FSSLSIDVIRCNLVCPKDEADVL*VFAYLE
Trigger: CTCCAGGTAGGCGAAAACCAAGAGTACATCGGCCTC...ATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp CTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTCGTAGTCCTCTGCCTCTaGGTAAGGAAGAACGTGATG +
Preference number: 5 (lower is better)
Translates to: LLFQLMSSGVTWYVLKILVVLCL*VRKNVM
Trigger: CATCACGTTCTTCCTTACCAAGAGGCAGAGGACTAC...GAGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp AAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGCAGTTTACTCTGCCTTaGTTCACCTGTACCTGCTGC +
Preference number: 5 (lower is better)
Translates to: KTSDHSCSTGFQDFMYSQQFTLP*FTCTCC
Trigger: GCAGCAGGTACAGGTGAACAAAGGCAGAGTAAACTG...CTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp AAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATCTGTGCGTGGGTGGGTaGTGCTTCAGAAGGGACATG +
Preference number: 5 (lower is better)
Translates to: KFKTSDHSCSTGFQDFMYLCVGG*CFRRDM
Trigger: CATGTCCCTTCTGAAGCACAACCCACCCACGCACAG...ATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp GAAACCGAACCACTCAAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTTCTCCTTGGACATTACTTaGAGGCTGAGACTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: ETEPLKFKTSDHSCSTGFSLDIT*RLRLCC
Trigger: GCAGCACAGTCTCAGCCTCAAAGTAATGTCCAAGGA...GAAACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTTGAGTGGTTCGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp GGCAACAGTAATACACCTCCTTCTCCAGACATCAATTACTCACTGATTTGGAGTTTAGTGGCATTCTGCTaGCTACGTTTCTGCTCCACA +
Preference number: 5 (lower is better)
Translates to: GNSNTPPSPDINYSLIWSLVAFC*LRFCST
Trigger: TGTGGAGCAGAAACGTAGCAAGCAGAATGCCACTAA...ACTCCAAATCAGTGAGTAATTGATGTCTGGAGAAGGAGGTGTATTACTGTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp CTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTCCTCCTCAGATTTTCCTaGCTCAGGGTCATCATCTGG +
Preference number: 5 (lower is better)
Translates to: LLFQLMSSGVTWYVLKILLLRFS*LRVIIW
Trigger: CCAGATGATGACCCTGAGCAAGGAAAATCTGAGGAG...GAGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp TTCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTTTCTTCTCTGCCATGTaGCTGCTATCGGGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: FSFSSLSIDVIRCNLVCPFFSAM*LLSGVS
Trigger: AGAAACCCCCGATAGCAGCAACATGGCAGAGAAGAA...AGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS TCA 90 bp TATACTGCTGAACATGTCTCACAGCAAAGCAAATCCCCAAGTTTGTaGCAAACCCTACAATGGTCATCATACTGTATCACCCCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: YTAEHVSQQSKSPSL*QTLQWSSYCITPSD
Trigger: GTCTGAAGGGGTGATACAGTATGATGACCATTGTAGGGTTTGTCACAAACTTGGGGATTTGCTTTGCTGTGAGACATGTTCAGCAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS GCA 90 bp GGAAAGCTTGGTCACTGTTGTAGTGGTGGTTGTGACAGTGGATTTTaGACAATTTTCTGTGGAAGAAACCACAGTTTGCTTATCGCCTTT +
Preference number: 5 (lower is better)
Translates to: GKLGHCCSGGCDSGF*TIFCGRNHSLLIAF
Trigger: AAAGGCGATAAGCAAACTGTGGTTTCTTCCACAGAAAATTGTGCAAAATCCACTGTCACAACCACCACTACAACAGTGACCAAGCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS-3UTR CAA 90 bp TTCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTTCACTTAGCTCCCCGTaGGACTTCTCCGATTTGAAA +
Preference number: 5 (lower is better)
Translates to: FSFSSLSIDVIRCNLVCPSLSSP*DFSDLK
Trigger: TTTCAAATCGGAGAAGTCCAACGGGGAGCTAAGTGA...AGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp AAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGAACAGGAGACTGTCCTaGGACATTACTTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: KTSDHSCSTGFQDFMYSQNRRLS*DITLRL
Trigger: CAGCCTCAAAGTAATGTCCAAGGACAGTCTCCTGTT...CTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp CAACTGGTTTCCAGGATTTCATGTATTCGCAGGGCTTTGAACAGATCCCAGAAAATGTATGTGGTTGAATaGGAATCGGTTGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: QLVSRISCIRRALNRSQKMYVVE*ESVVRL
Trigger: CAACCTCACAACCGATTCCAATTCAACCACATACAT...TTTCTGGGATCTGTTCAAAGCCCTGCGAATACATGAAATCCTGGAAACCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp TTCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTCTGCTCTCACATGTCTaGTTAGGTTCTTCTGGCACA +
Preference number: 5 (lower is better)
Translates to: FSFSSLSIDVIRCNLVCPLLSHV*LGSSGT
Trigger: TGTGCCAGAAGAACCTAACAAGACATGTGAGAGCAG...AGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS TCA 90 bp ATGAGACCTGCTAGCTTTGAAGCCTTTCAATTTCTGTACAAAGAATaGTTCGAGAACTTCTGCACACTGGTAAAATGGGGAGTCACTTGG +
Preference number: 5 (lower is better)
Translates to: MRPASFEAFQFLYKE*FENFCTLVKWGVTW
Trigger: CCAAGTGACTCCCCATTTTACCAGTGTGCAGAAGTTCTCGAATCATTCTTTGTACAGAAATTGAAAGGCTTCAAAGCTAGCAGGTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000578307.1
ENST00000644067.1
CDS TCA 90 bp ATTCACCCTGCTAGCTTTGAAGCCTTTCAATTTCTGTACAAAGAATaGTTCGAGAACTTCTGCACACTGGTAAAATGGGGAGTCACTTGG +
Preference number: 5 (lower is better)
Translates to: IHPASFEAFQFLYKE*FENFCTLVKWGVTW
Trigger: CCAAGTGACTCCCCATTTTACCAGTGTGCAGAAGTTCTCGAATCATTCTTTGTACAGAAATTGAAAGGCTTCAAAGCTAGCAGGGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577837.1
CDS GCA 90 bp GTGACTCTGTTTTCATGTCATCGTCTACTTCCATTGGTTCTTCCTTaGAGGGTTTATCACTGTCAGAATCTAAGAGCTCCTTCACATCTT +
Preference number: 5 (lower is better)
Translates to: VTLFSCHRLLPLVLP*RVYHCQNLRAPSHL
Trigger: AAGATGTGAAGGAGCTCTTAGATTCTGACAGTGATAAACCCTGCAAGGAAGAACCAATGGAAGTAGACGATGACATGAAAACAGAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CCA 90 bp TCGAAGGCCTTTCCTCTGAGGTGTAGGCGTTTCTTTTGGTGTTTCTaGAACTCCAATGGGACAAATGATTTTCCTGATACAATATTCAGA +
Preference number: 5 (lower is better)
Translates to: SKAFPLRCRRFFWCF*NSNGTNDFPDTIFR
Trigger: TCTGAATATTGTATCAGGAAAATCATTTGTCCCATTGGAGTTCCAGAAACACCAAAAGAAACGCCTACACCTCAGAGGAAAGGCCTTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS-3UTR CAA 90 bp AAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTCGCAGGCTGAACAGTACCATTaGGCATTGCAGCTTGCATTA +
Preference number: 5 (lower is better)
Translates to: KTSDHSCSTGFQDFMYSQAEQYH*ALQLAL
Trigger: TAATGCAAGCTGCAATGCCAAATGGTACTGTTCAGC...CTGCGAATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp CCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGTATCCCCAACTTCTGTaGGCTCCTCAGATTTTCCTT +
Preference number: 5 (lower is better)
Translates to: PFLLFQLMSSGVTWYVLKYPQLL*APQIFL
Trigger: AAGGAAAATCTGAGGAGCCAACAGAAGTTGGGGATA...CTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp CTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTCTGTTGTCGCCAAGATTaGCTGACACAGAGTTACCTT +
Preference number: 5 (lower is better)
Translates to: LLFQLMSSGVTWYVLKILCCRQD*LTQSYL
Trigger: AAGGTAACTCTGTGTCAGCAAATCTTGGCGACAACA...GAGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp TTCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTGTTGCATTTGTTGTGTaGTCGCCAAGATTTGCTGAC +
Preference number: 5 (lower is better)
Translates to: FSFSSLSIDVIRCNLVCPVAFVV*SPRFAD
Trigger: GTCAGCAAATCTTGGCGACAACACAACAAATGCAAC...AGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS TCA 90 bp TCATTATTTGCATTTGGGCTCTGTTCTTGTCTCATCGAGTCACTCTaGCACCCTTCTTTTGCTTTCGTTATTACTGGTGATTCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: SLFAFGLCSCLIESL*HPSFAFVITGDSER
Trigger: TCTCTCTGAATCACCAGTAATAACGAAAGCAAAAGAAGGGTGTCAGAGTGACTCGATGAGACAAGAACAGAGCCCAAATGCAAATAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS TCA 90 bp TCACAATCTGCTAGCTTTGAAGCCTTTCAATTTCTGTACAAAGAATaGTTCGAGAACTTCTGCACACTGGTAAAATGGGGAGTCACTTGG +
Preference number: 5 (lower is better)
Translates to: SQSASFEAFQFLYKE*FENFCTLVKWGVTW
Trigger: CCAAGTGACTCCCCATTTTACCAGTGTGCAGAAGTTCTCGAATCATTCTTTGTACAGAAATTGAAAGGCTTCAAAGCTAGCAGATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581258.5
CDS-3UTR CAA 90 bp TTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATGGTCCAAAGGTAGTATaGGAAGTGTCTTCTTCACGC +
Preference number: 5 (lower is better)
Translates to: FSSLSIDVIRCNLVCPKDGPKVV*EVSSSR
Trigger: GCGTGAAGAAGACACTTCCAATACTACCTTTGGACC...ATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp CCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGCTGAAGTTGCATTTGTaGTGTTGTCGCCAAGATTTG +
Preference number: 5 (lower is better)
Translates to: PFLLFQLMSSGVTWYVLKLKLHL*CCRQDL
Trigger: CAAATCTTGGCGACAACACAACAAATGCAACTTCAG...CTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp TTCTCCTTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTTTTCTTCTCTTTCAATaGATGTCATCCGGTGTAACC +
Preference number: 5 (lower is better)
Translates to: FSFSSLSIDVIRCNLVCPFLLFQ*MSSGVT
Trigger: GGTTACACCGGATGACATCAATTGAAAGAGAAGAAA...AGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAAGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp AAGAAACCGAACCACTCAAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTCAACTGTCCAGTAGTTaGACCTTGTCCTTGAATTAC +
Preference number: 5 (lower is better)
Translates to: KKPNHSNSKPLTIHVQLVQLSSS*TLSLNY
Trigger: GTAATTCAAGGACAAGGTCAAACTACTGGACAGTTG...AACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTTGAGTGGTTCGGTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp AAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATCAGTACCATTTGGCATaGCAGCTTGCATTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: KFKTSDHSCSTGFQDFMYQYHLA*QLALAA
Trigger: AGCAGCTAATGCAAGCTGCAATGCCAAATGGTACTG...ATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp AAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATTTCCTGCACTTCAATTaGCAGATCCTTGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: KFKTSDHSCSTGFQDFMYFLHFN*QILVQE
Trigger: CTCCTGGACAAGGATCTGCAAATTGAAGTGCAGGAA...ATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp TCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTCTTCTGAAGTTGCATTaGTTGTGTTGTCGCCAAGAT +
Preference number: 5 (lower is better)
Translates to: SSLSIDVIRCNLVCPKDSLLKLH*LCCRQD
Trigger: ATCTTGGCGACAACACAACAAATGCAACTTCAGAAG...AGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp TCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTCTGCAAGTTGGACCTTaGTGCTGTAATACCAAATTT +
Preference number: 5 (lower is better)
Translates to: SSLSIDVIRCNLVCPKDSLQVGP*CCNTKF
Trigger: AAATTTGGTATTACAGCACAAAGGTCCAACTTGCAG...AGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp TCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTTCATCATCTGGTGTTTaGTCGTCACTGTCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: SSLSIDVIRCNLVCPKDSSSSGV*SSLSFS
Trigger: TGAAAAAGACAGTGACGACAAAACACCAGATGATGA...AGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp CTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTCTCACTACCAGTACCTCTTaGCCCTCCTTAAATAATTTA +
Preference number: 5 (lower is better)
Translates to: LLFQLMSSGVTWYVLKILTTSTS*PSLNNL
Trigger: TAAATTATTTAAGGAGGGCAAAGAGGTACTGGTAGT...GAGAATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS TCA 90 bp CCTTCAGACATCAATTCCTCTCGAGCAATATTTGTTGTAAGAAACTaGTCGACTAGAAACTGTAGAACTTTGATCTTGTTCTCTACTGGT +
Preference number: 5 (lower is better)
Translates to: PSDINSSRAIFVVRN*STRNCRTLILFSTG
Trigger: ACCAGTAGAGAACAAGATCAAAGTTCTACAGTTTCTAGTCGATCAGTTTCTTACAACAAATATTGCTCGAGAGGAATTGATGTCTGAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS-3UTR CAA 90 bp AGCGTCAATGGTAAGAATATCACATGCAAGACCATGGATGAAACATTACTCTTAAGTTTGACCTTGTCCTaGAATTACTACTGTCAAACC +
Preference number: 5 (lower is better)
Translates to: SVNGKNITCKTMDETLLLSLTLS*NYYCQT
Trigger: GGTTTGACAGTAGTAATTCAAGGACAAGGTCAAACT...TAAGAGTAATGTTTCATCCATGGTCTTGCATGTGATATTCTTACCATTGACGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp AGCGTCAATGGTAAGAATATCACATGCAAGACCATGGATGAAACATTACTCTTATCTTTTTCTTGGACTTaGAGCTGGAGTCTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: SVNGKNITCKTMDETLLLSFSWT*SWSLFP
Trigger: AGGAAAAAGACTCCAGCTCAAAGTCCAAGAAAAAGA...TAAGAGTAATGTTTCATCCATGGTCTTGCATGTGATATTCTTACCATTGACGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS-3UTR CAA 90 bp TTTTCTTCTCTTTCAATTGATGTCATCCGGTGTAACCTGGTATGTCCTAAAGATTGTAGAACTTTGATCTaGTTCTCTACTGGTCCATAT +
Preference number: 5 (lower is better)
Translates to: FSSLSIDVIRCNLVCPKDCRTLI*FSTGPY
Trigger: ATATGGACCAGTAGAGAACAAGATCAAAGTTCTACA...ATCTTTAGGACATACCAGGTTACACCGGATGACATCAATTGAAAGAGAAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335221.9
CDS-3UTR CAA 90 bp AAATTCAAAACCTCTGACCATTCATGTTCAACTGGTTTCCAGGATTTCATGTATCAATTACTCACTGATTaGGAGTTAATTCAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: KFKTSDHSCSTGFQDFMYQLLTD*ELIQRE
Trigger: TTCCCTCTGAATTAACTCCAAATCAGTGAGTAATTG...ATACATGAAATCCTGGAAACCAGTTGAACATGAATGGTCAGAGGTTTTGAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580465.5
CDS CAA 90 bp CCCGTGGTGGTCAGGGAGTCTGTCACTGTCGTGGTGACCACGGTTTaGCTCTGCTCCTTTACAGAGATGATGTCCACACTGCCGCCTGTG +
Preference number: 6 (lower is better)
Translates to: PVVVRESVTVVVTTV*LCSFTEMMSTLPPV
Trigger: CACAGGCGGCAGTGTGGACATCATCTCTGTAAAGGAGCAGAGCAAAACCGTGGTCACCACGACAGTGACAGACTCCCTGACCACCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp GTTAGGGGCGGAGACTGCAGTGGAGACAGGCTGCCCCCTGATGATTaGAGTCATCACTTGCTGAGGAGCACCTGGCTGTACCATCACAGG +
Preference number: 6 (lower is better)
Translates to: VRGGDCSGDRLPPDD*SHHLLRSTWLYHHR
Trigger: CCTGTGATGGTACAGCCAGGTGCTCCTCAGCAAGTGATGACTCAAATCATCAGGGGGCAGCCTGTCTCCACTGCAGTCTCCGCCCCTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000582467.1
ENST00000644067.1
CDS GCA 72 bp GGAGCTCAGATGCCACCTTCTTCTCTGCCATGTTGCTaGTATCGGGGGTTTCTGAGAGACACCCCACAGGGC +
Preference number: 6 (lower is better)
Translates to: GAQMPPSSLPCC*YRGFLRDTPQG
Trigger: GCCCTGTGGGGTGTCTCTCAGAAACCCCCGATAGCAGCAACATGGCAGAGAAGAAGGTGGCATCTGAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CCA 72 bp TTTCCGATAAACCCACAGCTCTACCTGCTGCTGTCGTaGAAACAGTGGTGGTGGTGGTGCTGGCTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: FPINPQLYLLLS*KQWWWWCWLWW
Trigger: CCACCACAGCCAGCACCACCACCACCACTGTTTCCACGACAGCAGCAGGTAGAGCTGTGGGTTTATCGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582406.1
ENST00000584931.1
CDS CAA 72 bp GTTTCTGTCCGTGTAGTCCCTCCTCCTGGAGGAGCCTaGGCCGCCATATCATCCCATCTCAAACTTGCCCAC +
Preference number: 6 (lower is better)
Translates to: VSVRVVPPPGGA*AAISSHLKLAH
Trigger: GTGGGCAAGTTTGAGATGGGATGATATGGCGGCCAAGGCTCCTCCAGGAGGAGGGACTACACGGACAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp GGAGACTGCAGTGGAGACAGGCTGCCCCCTGATGATTaGAGTCATCACTTGCTGAGGAGCACCTGGCTGTAC +
Preference number: 6 (lower is better)
Translates to: GDCSGDRLPPDD*SHHLLRSTWLY
Trigger: GTACAGCCAGGTGCTCCTCAGCAAGTGATGACTCAAATCATCAGGGGGCAGCCTGTCTCCACTGCAGTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000582467.1
ENST00000644067.1
CDS CAA 90 bp CTGAAGGCTGAGCAGTCTGTGGCTGGGCTTCTGCTGGACCCACACTaGATGACTGAGCTGGTGGCAGGGTTTTGTCTTGATGTACCTGCA +
Preference number: 6 (lower is better)
Translates to: LKAEQSVAGLLLDPH*MTELVAGFCLDVPA
Trigger: TGCAGGTACATCAAGACAAAACCCTGCCACCAGCTCAGTCATCAAGTGTGGGTCCAGCAGAAGCCCAGCCACAGACTGCTCAGCCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000580465.5
ENST00000582406.1
ENST00000644067.1
CDS TCA 72 bp CTTGGGCGTTTCTGGTCTCTTTGGCCGCAGTGCACTTaGTCGAAGGCCTTTCCTCTGAGGTGTAGGCGTTTC +
Preference number: 6 (lower is better)
Translates to: LGRFWSLWPQCT*SKAFPLRCRRF
Trigger: GAAACGCCTACACCTCAGAGGAAAGGCCTTCGATCAAGTGCACTGCGGCCAAAGAGACCAGAAACGCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000582467.1
ENST00000644067.1
CDS GCA 72 bp AGTGGTGGTGGTGGTGCTGGCTGTGGTGGCTGTTGTTaGCAATGGGGTAAAGAGGAATCGCTGAACAGTACC +
Preference number: 6 (lower is better)
Translates to: SGGGGAGCGGCC*QWGKEESLNST
Trigger: GGTACTGTTCAGCGATTCCTCTTTACCCCATTGGCAACAACAGCCACCACAGCCAGCACCACCACCACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000580465.5
ENST00000582406.1
ENST00000584931.1
ENST00000644067.1
CDS GCA 72 bp GTTAGGTTCTTCTGGCACATCCTGGGGGAGCTCAGATaGCACCTTCTTCTCTGCCATGTTGCTGCTATCGGG +
Preference number: 6 (lower is better)
Translates to: VRFFWHILGELR*HLLLCHVAAIG
Trigger: CCCGATAGCAGCAACATGGCAGAGAAGAAGGTGGCATCTGAGCTCCCCCAGGATGTGCCAGAAGAACCTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000644067.1
CDS GCA 72 bp GAAATCACCTACTGGCACATCCTGGGGGAGCTCAGATaGCACCTTCTTCTCTGCCATGTTGCTGCTATCGGG +
Preference number: 6 (lower is better)
Translates to: EITYWHILGELR*HLLLCHVAAIG
Trigger: CCCGATAGCAGCAACATGGCAGAGAAGAAGGTGGCATCTGAGCTCCCCCAGGATGTGCCAGTAGGTGATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544778.6
CDS CCA 72 bp GACTGTGCTGCAACTTGGGGCTTGGATGACTGTGCGTaGGTGGGTTGTGCTTCAGAAGGGACATGGGATGAA +
Preference number: 6 (lower is better)
Translates to: DCAATWGLDDCA*VGCASEGTWDE
Trigger: TTCATCCCATGTCCCTTCTGAAGCACAACCCACCCACGCACAGTCATCCAAGCCCCAAGTTGCAGCACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000580465.5
ENST00000644067.1
CDS CAA 90 bp CTCCTCCTGGAGGAGCCTTGGCCGCCATATCATCCCATCTCAAACTaGCCCACAGTAACCGTAACATCAGGCTCACTCCAGCTAAGGACT +
Preference number: 6 (lower is better)
Translates to: LLLEEPWPPYHPISN*PTVTVTSGSLQLRT
Trigger: AGTCCTTAGCTGGAGTGAGCCTGATGTTACGGTTACTGTGGGCAAGTTTGAGATGGGATGATATGGCGGCCAAGGCTCCTCCAGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp GTTTCGGATGTTTCTGTCCGTGTAGTCCCTCCTCCTGGAGGAGCCTaGGCCGCCATATCATCCCATCTCAAACTTGCCCACAGTAACCGT +
Preference number: 6 (lower is better)
Translates to: VSDVSVRVVPPPGGA*AAISSHLKLAHSNR
Trigger: ACGGTTACTGTGGGCAAGTTTGAGATGGGATGATATGGCGGCCAAGGCTCCTCCAGGAGGAGGGACTACACGGACAGAAACATCCGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS GCA 72 bp TTCAGCAACACAGTCAGTCACACCAGGCACCTTGTGTaGTACACAGACTTCACACTGCCACTCGTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: FSNTVSHTRHLV*YTDFTLPLVLW
Trigger: CCAGAGGACGAGTGGCAGTGTGAAGTCTGTGTAGCACACAAGGTGCCTGGTGTGACTGACTGTGTTGCTGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CCA 72 bp GTGTGCTACACAGACTTCACACTGCCACTCGTCCTCTaGCACCTCCTCAAGAGGTGGCTTCACACATTCCAA +
Preference number: 6 (lower is better)
Translates to: VCYTDFTLPLVL*HLLKRWLHTFQ
Trigger: TTGGAATGTGTGAAGCCACCTCTTGAGGAGGTGCCAGAGGACGAGTGGCAGTGTGAAGTCTGTGTAGCACAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CCA 72 bp AGTTTCGGATGTTTCTGTCCGTGTAGTCCCTCCTCCTaGAGGAGCCTTGGCCGCCATATCATCCCATCTCAA +
Preference number: 6 (lower is better)
Translates to: SFGCFCPCSPSS*RSLGRHIIPSQ
Trigger: TTGAGATGGGATGATATGGCGGCCAAGGCTCCTCCAGGAGGAGGGACTACACGGACAGAAACATCCGAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp GAGGAGCCTTGGCCGCCATATCATCCCATCTCAAACTaGCCCACAGTAACCGTAACATCAGGCTCACTCCAG +
Preference number: 6 (lower is better)
Translates to: EEPWPPYHPISN*PTVTVTSGSLQ
Trigger: CTGGAGTGAGCCTGATGTTACGGTTACTGTGGGCAAGTTTGAGATGGGATGATATGGCGGCCAAGGCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp CCAGATGCTCCTTTTCCAGCTCCAGGAGATTCACTTAGCTCCCCGTaGGACTTCTCCGATTTGAAATCACCTACTGGCACATCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: PDAPFPAPGDSLSSP*DFSDLKSPTGTSWG
Trigger: CCCCCAGGATGTGCCAGTAGGTGATTTCAAATCGGAGAAGTCCAACGGGGAGCTAAGTGAATCTCCTGGAGCTGGAAAAGGAGCATCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544778.6
CDS CAA 90 bp GTTAGGGGCGGAGACTGCAGTGGAGACAGGCTGCCCCCTGATGATTaGAGTCATCACTTGCTGAGGAGCACATTAAATGAGCACTGCACA +
Preference number: 6 (lower is better)
Translates to: VRGGDCSGDRLPPDD*SHHLLRSTLNEHCT
Trigger: TGTGCAGTGCTCATTTAATGTGCTCCTCAGCAAGTGATGACTCAAATCATCAGGGGGCAGCCTGTCTCCACTGCAGTCTCCGCCCCTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577770.1
CDS TCA 72 bp GGGTGTGGTCGTCTGTGTACTGTCAGACTCTTTGGTTaGTGGCAGGGTCTCAAGGCTATCTCGGTAGTTACC +
Preference number: 6 (lower is better)
Translates to: GCGRLCTVRLFG*WQGLKAISVVT
Trigger: GGTAACTACCGAGATAGCCTTGAGACCCTGCCATCAACCAAAGAGTCTGACAGTACACAGACGACCACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS TCA 72 bp GAGATTCACTTAGCTCCCCGTTGGACTTCTCCGATTTaGAATCACCTACTGGCACATCCTGGGGGAGCTCAG +
Preference number: 6 (lower is better)
Translates to: EIHLAPRWTSPI*NHLLAHPGGAQ
Trigger: CTGAGCTCCCCCAGGATGTGCCAGTAGGTGATTTCAAATCGGAGAAGTCCAACGGGGAGCTAAGTGAATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544778.6
CDS CCA 72 bp CTGAGGGTGTGGTCGTCTGTGTACTGTCAGACTCTTTaGTTGATGGCAGGGTCTCAAGGCTATCTCGGTAGT +
Preference number: 6 (lower is better)
Translates to: LRVWSSVYCQTL*LMAGSQGYLGS
Trigger: ACTACCGAGATAGCCTTGAGACCCTGCCATCAACCAAAGAGTCTGACAGTACACAGACGACCACACCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp CACAACATGCATCTCTGCCATGAGTGTGCACTGCTCTaGGCTCACCAGAGCTGCACAAAAGTCCTCAAAGCG +
Preference number: 6 (lower is better)
Translates to: HNMHLCHECALL*AHQSCTKVLKA
Trigger: CGCTTTGAGGACTTTTGTGCAGCTCTGGTGAGCCAAGAGCAGTGCACACTCATGGCAGAGATGCATGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp TGGATTTCAGCAACACAGTCAGTCACACCAGGCACCTaGTGTGCTACACAGACTTCACACTGCCACTCGTCC +
Preference number: 6 (lower is better)
Translates to: WISATQSVTPGT*CATQTSHCHSS
Trigger: GGACGAGTGGCAGTGTGAAGTCTGTGTAGCACACAAGGTGCCTGGTGTGACTGACTGTGTTGCTGAAATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp GTCAGGGAGTCTGTCACTGTCGTGGTGACCACGGTTTaGCTCTGCTCCTTTACAGAGATGATGTCCACACTG +
Preference number: 6 (lower is better)
Translates to: VRESVTVVVTTV*LCSFTEMMSTL
Trigger: CAGTGTGGACATCATCTCTGTAAAGGAGCAGAGCAAAACCGTGGTCACCACGACAGTGACAGACTCCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp CTGATCCCTGAGTTGCTGAACCCTTTGCAACTGCTCTaGCACACTGGCTGCCTGCACTGTAACCACATTCTG +
Preference number: 6 (lower is better)
Translates to: LIPELLNPLQLL*HTGCLHCNHIL
Trigger: CAGAATGTGGTTACAGTGCAGGCAGCCAGTGTGCAAGAGCAGTTGCAAAGGGTTCAGCAACTCAGGGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000644067.1
CDS CAA 72 bp GGAGATTCACTTAGCTCCCCGTTGGACTTCTCCGATTaGAAATCACCTACTGGCACATCCTGGGGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: GDSLSSPLDFSD*KSPTGTSWGSS
Trigger: TGAGCTCCCCCAGGATGTGCCAGTAGGTGATTTCAAATCGGAGAAGTCCAACGGGGAGCTAAGTGAATCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544778.6
CDS CAA 90 bp GTGCGTGGGTGGGTTGTGCTTCAGAAGGGACATGGGATGAAACAGTaGTTTGGGTCTGAACTTCAGGCTGAGTCTGAACTTCAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: VRGWVVLQKGHGMKQ*FGSELQAESELQAE
Trigger: CTCAGCCTGAAGTTCAGACTCAGCCTGAAGTTCAGACCCAAACAACTGTTTCATCCCATGTCCCTTCTGAAGCACAACCCACCCACGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000580465.5
ENST00000644067.1
CDS CAA 90 bp TCCAGGAGTGCTCTCTTCTTCAGGATCTCGGCTCTGAGCTGCTCTTaGTGCTTGAAGAGCAGAGCTGACAGCTTAGTGGCATTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SRSALFFRISALSCS*CLKSRADSLVAFCL
Trigger: CAAGCAGAATGCCACTAAGCTGTCAGCTCTGCTCTTCAAGCACAAAGAGCAGCTCAGAGCCGAGATCCTGAAGAAGAGAGCACTCCTGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000580465.5
ENST00000581258.5
ENST00000644067.1
CDS CAA 90 bp CTTTTGCTGCTGATCCCTGAGTTGCTGAACCCTTTGCAACTGCTCTaGCACACTGGCTGCCTGCACTGTAACCACATTCTGAATCTGGTG +
Preference number: 6 (lower is better)
Translates to: LLLLIPELLNPLQLL*HTGCLHCNHILNLV
Trigger: CACCAGATTCAGAATGTGGTTACAGTGCAGGCAGCCAGTGTGCAAGAGCAGTTGCAAAGGGTTCAGCAACTCAGGGATCAGCAGCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000644067.1
CDS TCA 72 bp TGCGTGGGTGGGTTGTGCTTCAGAAGGGACATGGGATaGAACAGTTGTTTGGGTCTGAACTTCAGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: CVGGLCFRRDMG*NSCLGLNFRLS
Trigger: ACTCAGCCTGAAGTTCAGACCCAAACAACTGTTTCATCCCATGTCCCTTCTGAAGCACAACCCACCCACGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000580465.5
ENST00000644067.1
CDS GCA 72 bp ACGCAGAACTGCTTTCAAAAGCACAACATGCATCTCTaGCATGAGTGTGCACTGCTCTTGGCTCACCAGAGC +
Preference number: 6 (lower is better)
Translates to: TQNCFQKHNMHL*HECALLLAHQS
Trigger: GCTCTGGTGAGCCAAGAGCAGTGCACACTCATGGCAGAGATGCATGTTGTGCTTTTGAAAGCAGTTCTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS GCA 72 bp CTCTTCTTCAGGATCTCGGCTCTGAGCTGCTCTTTGTaGTTGAAGAGCAGAGCTGACAGCTTAGTGGCATTC +
Preference number: 6 (lower is better)
Translates to: LFFRISALSCSL*LKSRADSLVAF
Trigger: GAATGCCACTAAGCTGTCAGCTCTGCTCTTCAAGCACAAAGAGCAGCTCAGAGCCGAGATCCTGAAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000580465.5
ENST00000581258.5
ENST00000644067.1
CDS GCA 72 bp AGGAGTGCTCTCTTCTTCAGGATCTCGGCTCTGAGCTaGTCTTTGTGCTTGAAGAGCAGAGCTGACAGCTTA +
Preference number: 6 (lower is better)
Translates to: RSALFFRISALS*SLCLKSRADSL
Trigger: TAAGCTGTCAGCTCTGCTCTTCAAGCACAAAGAGCAGCTCAGAGCCGAGATCCTGAAGAAGAGAGCACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000580465.5
ENST00000581258.5
ENST00000644067.1
CDS CCA 72 bp ACAACATGCATCTCTGCCATGAGTGTGCACTGCTCTTaGCTCACCAGAGCTGCACAAAAGTCCTCAAAGCGA +
Preference number: 6 (lower is better)
Translates to: TTCISAMSVHCS*LTRAAQKSSKR
Trigger: TCGCTTTGAGGACTTTTGTGCAGCTCTGGTGAGCCAAGAGCAGTGCACACTCATGGCAGAGATGCATGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CCA 72 bp ACATTAAATGAGCACTGCACAGCCAGGCGGCAGGGTTaGGTAGTTCATCATACAAACCCTATCCTCACAGGG +
Preference number: 6 (lower is better)
Translates to: TLNEHCTARRQG*VVHHTNPILTG
Trigger: CCCTGTGAGGATAGGGTTTGTATGATGAACTACCCAACCCTGCCGCCTGGCTGTGCAGTGCTCATTTAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577770.1
CDS CAA 72 bp AGGGTGTGGTCGTCTGTGTACTGTCAGACTCTTTGGTaGATGGCAGGGTCTCAAGGCTATCTCGGTAGTTAC +
Preference number: 6 (lower is better)
Translates to: RVWSSVYCQTLW*MAGSQGYLGSY
Trigger: GTAACTACCGAGATAGCCTTGAGACCCTGCCATCAACCAAAGAGTCTGACAGTACACAGACGACCACACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp GCTACCCAGGTTTCAATAATAACAGGGCCAGTTTGCTaGGGCGTTTCTGGTCTCTTTGGCCGCAGTGCACTT +
Preference number: 6 (lower is better)
Translates to: ATQVSIITGPVC*GVSGLFGRSAL
Trigger: AAGTGCACTGCGGCCAAAGAGACCAGAAACGCCCAAGCAAACTGGCCCTGTTATTATTGAAACCTGGGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000582467.1
ENST00000644067.1
CDS CAA 72 bp TTCTGCTACCCAGGTTTCAATAATAACAGGGCCAGTTaGCTTGGGCGTTTCTGGTCTCTTTGGCCGCAGTGC +
Preference number: 6 (lower is better)
Translates to: FCYPGFNNNRAS*LGRFWSLWPQC
Trigger: GCACTGCGGCCAAAGAGACCAGAAACGCCCAAGCAAACTGGCCCTGTTATTATTGAAACCTGGGTAGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000582467.1
ENST00000644067.1
CDS CAA 72 bp GGAGACTGCAGTGGAGACAGGCTGCCCCCTGATGATTaGAGTCATCACTTGCTGAGGAGCACATTAAATGAG +
Preference number: 6 (lower is better)
Translates to: GDCSGDRLPPDD*SHHLLRSTLNE
Trigger: CTCATTTAATGTGCTCCTCAGCAAGTGATGACTCAAATCATCAGGGGGCAGCCTGTCTCCACTGCAGTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577770.1
CDS CAA 90 bp AAGATGCTGAGGGTGTGGTCGTCTGTGTACTGTCAGACTCTTTGGTaGATGGCAGGGTCTCAAGGCTATCTCGGTAGTTACCTTCAGCAT +
Preference number: 6 (lower is better)
Translates to: KMLRVWSSVYCQTLW*MAGSQGYLGSYLQH
Trigger: ATGCTGAAGGTAACTACCGAGATAGCCTTGAGACCCTGCCATCAACCAAAGAGTCTGACAGTACACAGACGACCACACCCTCAGCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp TCTTCTTCTGCTACCCAGGTTTCAATAATAACAGGGCCAGTTTGCTaGGGCGTTTCTGGTCTCTTTGGCCGCAGTGCACTTGATCGAAGG +
Preference number: 6 (lower is better)
Translates to: SSSATQVSIITGPVC*GVSGLFGRSALDRR
Trigger: CCTTCGATCAAGTGCACTGCGGCCAAAGAGACCAGAAACGCCCAAGCAAACTGGCCCTGTTATTATTGAAACCTGGGTAGCAGAAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000582467.1
ENST00000644067.1
CDS CAA 90 bp GGCGAGGGGGTTGTGAGGCTGAAGACTGTATATTTGAAGTGGACGTaGCTGAAGTTAAGCTTTTCTGCCCAGGTGTTGAGGAAACCGTGT +
Preference number: 6 (lower is better)
Translates to: GEGVVRLKTVYLKWT*LKLSFSAQVLRKPC
Trigger: ACACGGTTTCCTCAACACCTGGGCAGAAAAGCTTAACTTCAGCAACGTCCACTTCAAATATACAGTCTTCAGCCTCACAACCCCCTCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000577770.1
ENST00000644067.1
CDS TCA 72 bp GCTATCTGGATTCCGCAATCTGGTGATGATTCGAGTTaGGCCAGATGCTCCTTTTCCAGCTCCAGGAGATTC +
Preference number: 6 (lower is better)
Translates to: AIWIPQSGDDSS*ARCSFSSSRRF
Trigger: GAATCTCCTGGAGCTGGAAAAGGAGCATCTGGCTCAACTCGAATCATCACCAGATTGCGGAATCCAGATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544491.2
ENST00000544778.6
ENST00000579173.1
ENST00000644067.1
CDS TCA 72 bp TTTGGCCGCAGTGCACTTGATCGAAGGCCTTTCCTCTaGGGTGTAGGCGTTTCTTTTGGTGTTTCTGGAACT +
Preference number: 6 (lower is better)
Translates to: FGRSALDRRPFL*GVGVSFGVSGT
Trigger: AGTTCCAGAAACACCAAAAGAAACGCCTACACCTCAGAGGAAAGGCCTTCGATCAAGTGCACTGCGGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000582467.1
ENST00000644067.1
CDS TCA 72 bp TGGCAGGGTTTTGTCTTGATGTACCTGCATCTGGGGTaGCAGTTTACTCTGCCTTTGTTCACCTGTACCTGC +
Preference number: 6 (lower is better)
Translates to: WQGFVLMYLHLG*QFTLPLFTCTC
Trigger: GCAGGTACAGGTGAACAAAGGCAGAGTAAACTGTCACCCCAGATGCAGGTACATCAAGACAAAACCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000580465.5
ENST00000644067.1
CDS TCA 72 bp ACCACTTTGCTGAGCCTGTATCTGAGCCACAACCTGTaGCTGGATCTGAGAGAGAACCTGGACTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: TTLLSLYLSHNL*LDLRENLDLLL
Trigger: CAACAACAAGTCCAGGTTCTCTCTCAGATCCAGTCACAGGTTGTGGCTCAGATACAGGCTCAGCAAAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000644067.1
CDS TCA 72 bp TGGCAGGGTTTTGTCTTGATGTACCTGCATCTGGGGTaGCAGTTTACTCTGCCTTTGTTCACCTGTACTGGC +
Preference number: 6 (lower is better)
Translates to: WQGFVLMYLHLG*QFTLPLFTCTG
Trigger: GCCAGTACAGGTGAACAAAGGCAGAGTAAACTGTCACCCCAGATGCAGGTACATCAAGACAAAACCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582406.1
CDS GCA 72 bp TTGCTGAACCCTTTGCAACTGCTCTTGCACACTGGCTaGCTGCACTGTAACCACATTCTGAATCTGGTGAGT +
Preference number: 6 (lower is better)
Translates to: LLNPLQLLLHTG*LHCNHILNLVS
Trigger: ACTCACCAGATTCAGAATGTGGTTACAGTGCAGGCAGCCAGTGTGCAAGAGCAGTTGCAAAGGGTTCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000644067.1
CDS CAA 72 bp GTAGTGGTAGCACTAGTGTTACTGCTCTCACATGTCTaGTTAGGTTCTTCTGGCACATCCTGGGGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: VVVALVLLLSHV*LGSSGTSWGSS
Trigger: TGAGCTCCCCCAGGATGTGCCAGAAGAACCTAACAAGACATGTGAGAGCAGTAACACTAGTGCTACCACTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000644067.1
CDS CAA 72 bp CCTTTTCCAGCTCCAGGAGATTCACTTAGCTCCCCGTaGGACTTCTCCGATTTGAAATCACCTACTGGCACA +
Preference number: 6 (lower is better)
Translates to: PFPAPGDSLSSP*DFSDLKSPTGT
Trigger: TGTGCCAGTAGGTGATTTCAAATCGGAGAAGTCCAACGGGGAGCTAAGTGAATCTCCTGGAGCTGGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544778.6
CDS TCA 72 bp GTGGCTGTTGTTGCCAATGGGGTAAAGAGGAATCGCTaGACAGTACCATTTGGCATTGCAGCTTGCATTAGC +
Preference number: 6 (lower is better)
Translates to: VAVVANGVKRNR*TVPFGIAACIS
Trigger: GCTAATGCAAGCTGCAATGCCAAATGGTACTGTTCAGCGATTCCTCTTTACCCCATTGGCAACAACAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000577770.1
ENST00000580465.5
ENST00000584931.1
ENST00000644067.1
CDS GCA 72 bp TCTTCTTCACGCAGAACTGCTTTCAAAAGCACAACATaGATCTCTGCCATGAGTGTGCACTGCTCTTGGCTC +
Preference number: 6 (lower is better)
Translates to: SSSRRTAFKSTT*ISAMSVHCSWL
Trigger: GAGCCAAGAGCAGTGCACACTCATGGCAGAGATGCATGTTGTGCTTTTGAAAGCAGTTCTGCGTGAAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS GCA 72 bp ATATTTGAAGTGGACGTTGCTGAAGTTAAGCTTTTCTaGCCAGGTGTTGAGGAAACCGTGTTAGGGGCGGAG +
Preference number: 6 (lower is better)
Translates to: IFEVDVAEVKLF*PGVEETVLGAE
Trigger: CTCCGCCCCTAACACGGTTTCCTCAACACCTGGGCAGAAAAGCTTAACTTCAGCAACGTCCACTTCAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000577770.1
ENST00000644067.1
CDS CCA 72 bp GAGGGGGTTGTGAGGCTGAAGACTGTATATTTGAAGTaGACGTTGCTGAAGTTAAGCTTTTCTGCCCAGGTG +
Preference number: 6 (lower is better)
Translates to: EGVVRLKTVYLK*TLLKLSFSAQV
Trigger: CACCTGGGCAGAAAAGCTTAACTTCAGCAACGTCCACTTCAAATATACAGTCTTCAGCCTCACAACCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000577770.1
ENST00000644067.1
CDS CAA 72 bp CCTTTTCCAGCTCCAGGAGATTCACTTAGCTCCCCGTaGGACTTCTCCGATTTGAAATCACCTACCTCAGAT +
Preference number: 6 (lower is better)
Translates to: PFPAPGDSLSSP*DFSDLKSPTSD
Trigger: ATCTGAGGTAGGTGATTTCAAATCGGAGAAGTCCAACGGGGAGCTAAGTGAATCTCCTGGAGCTGGAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306378.11
CDS CAA 90 bp CCCTTGAGGTATCAACTGCAACTGTCCAGTAGTTTGACCTTGTCCTaGAATTACTACTGTCAAACCTTGATTGCCACCGTGGCCCTGTGT +
Preference number: 6 (lower is better)
Translates to: PLRYQLQLSSSLTLS*NYYCQTLIATVALC
Trigger: ACACAGGGCCACGGTGGCAATCAAGGTTTGACAGTAGTAATTCAAGGACAAGGTCAAACTACTGGACAGTTGCAGTTGATACCTCAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000577770.1
ENST00000580465.5
ENST00000584931.1
ENST00000644067.1
CDS CAA 90 bp AGTCACCCCTTGAGGTATCAACTGCAACTGTCCAGTAGTTTGACCTaGTCCTTGAATTACTACTGTCAAACCTTGATTGCCACCGTGGCC +
Preference number: 6 (lower is better)
Translates to: SHPLRYQLQLSSSLT*SLNYYCQTLIATVA
Trigger: GGCCACGGTGGCAATCAAGGTTTGACAGTAGTAATTCAAGGACAAGGTCAAACTACTGGACAGTTGCAGTTGATACCTCAAGGGGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000577770.1
ENST00000580465.5
ENST00000584931.1
ENST00000644067.1
CDS TCA 72 bp GAGATTCACTTAGCTCCCCGTTGGACTTCTCCGATTTaGAATCACCTACCTCAGATTTTCCTTGCTCAGGGT +
Preference number: 6 (lower is better)
Translates to: EIHLAPRWTSPI*NHLPQIFLAQG
Trigger: ACCCTGAGCAAGGAAAATCTGAGGTAGGTGATTTCAAATCGGAGAAGTCCAACGGGGAGCTAAGTGAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306378.11
CDS TCA 72 bp AGTGGTGTTCTAATCACGGTCATACCAGGGCGAATCTaGGGCCCTGTGATTACTTGTGAATTGCTTGTGGTT +
Preference number: 6 (lower is better)
Translates to: SGVLITVIPGRI*GPVITCELLVV
Trigger: AACCACAAGCAATTCACAAGTAATCACAGGGCCTCAGATTCGCCCTGGTATGACCGTGATTAGAACACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000582467.1
ENST00000644067.1
CDS GCA 72 bp GATCTTGTTCTCTACTGGTCCATATGGGTAGTCCTCTaGCTCTTGGTAAGGAAGAACGTGATGGTACTCCTT +
Preference number: 6 (lower is better)
Translates to: DLVLYWSIWVVL*LLVRKNVMVLL
Trigger: AAGGAGTACCATCACGTTCTTCCTTACCAAGAGGCAGAGGACTACCCATATGGACCAGTAGAGAACAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CCA 72 bp GGCACCTCCTCAAGAGGTGGCTTCACACATTCCAAATaGTATACTGCTGAACATGTCTCACAGCAAAGCAAA +
Preference number: 6 (lower is better)
Translates to: GTSSRGGFTHSK*YTAEHVSQQSK
Trigger: TTTGCTTTGCTGTGAGACATGTTCAGCAGTATACCATTTGGAATGTGTGAAGCCACCTCTTGAGGAGGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CCA 72 bp GGTGTTCGAATAATTGCCTTTCCTAGTGTTGACTGTTaGAGTGGTGTTCTAATCACGGTCATACCAGGGCGA +
Preference number: 6 (lower is better)
Translates to: GVRIIAFPSVDC*SGVLITVIPGR
Trigger: TCGCCCTGGTATGACCGTGATTAGAACACCACTCCAACAGTCAACACTAGGAAAGGCAATTATTCGAACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000582467.1
ENST00000644067.1
CDS CCA 72 bp GGAGTTGATGGACGTATTCGAGTCTGTGATGGACTTTaGACACGAACAGGAGACTGTCCTTGGACATTACTT +
Preference number: 6 (lower is better)
Translates to: GVDGRIRVCDGL*TRTGDCPWTLL
Trigger: AAGTAATGTCCAAGGACAGTCTCCTGTTCGTGTCCAAAGTCCATCACAGACTCGAATACGTCCATCAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000580465.5
ENST00000644067.1
CDS CAA 72 bp GTTCTCTACTGGTCCATATGGGTAGTCCTCTGCCTCTaGGTAAGGAAGAACGTGATGGTACTCCTTATCACT +
Preference number: 6 (lower is better)
Translates to: VLYWSIWVVLCL*VRKNVMVLLIT
Trigger: AGTGATAAGGAGTACCATCACGTTCTTCCTTACCAAGAGGCAGAGGACTACCCATATGGACCAGTAGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp TGGGTTGTGCTTCAGAAGGGACATGGGATGAAACAGTaGTTTGGGTCTGAACTTCAGGCTGAGTCTGAACTT +
Preference number: 6 (lower is better)
Translates to: WVVLQKGHGMKQ*FGSELQAESEL
Trigger: AAGTTCAGACTCAGCCTGAAGTTCAGACCCAAACAACTGTTTCATCCCATGTCCCTTCTGAAGCACAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000580465.5
ENST00000644067.1
CDS CAA 72 bp CCTTTTCCAGCTCCAGGAGATTCACTTAGCTCCCCGTaGGACTTCTCCGATTTGAAATCACCTACTATCTCT +
Preference number: 6 (lower is better)
Translates to: PFPAPGDSLSSP*DFSDLKSPTIS
Trigger: AGAGATAGTAGGTGATTTCAAATCGGAGAAGTCCAACGGGGAGCTAAGTGAATCTCCTGGAGCTGGAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544491.2
ENST00000644067.1
CDS CAA 72 bp CCTTTTCCAGCTCCAGGAGATTCACTTAGCTCCCCGTaGGACTTCTCCGATTTGAAATCACCTACTGTCAAA +
Preference number: 6 (lower is better)
Translates to: PFPAPGDSLSSP*DFSDLKSPTVK
Trigger: TTTGACAGTAGGTGATTTCAAATCGGAGAAGTCCAACGGGGAGCTAAGTGAATCTCCTGGAGCTGGAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579173.1
CDS CAA 90 bp GAGTACAGTCACCCCTTGAGGTATCAACTGCAACTGTCCAGTAGTTaGACCTTGTCCTTGAATTACTACTGTCAAACCTTGATTGCCACC +
Preference number: 6 (lower is better)
Translates to: EYSHPLRYQLQLSSS*TLSLNYYCQTLIAT
Trigger: GGTGGCAATCAAGGTTTGACAGTAGTAATTCAAGGACAAGGTCAAACTACTGGACAGTTGCAGTTGATACCTCAAGGGGTGACTGTACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000577770.1
ENST00000580465.5
ENST00000584931.1
ENST00000644067.1
CDS CAA 90 bp CTCCCTTCAGAGGGACTAGTCTCTTCTGAAGTTGCATTTGTTGTGTaGTCGCCAAGATTTGCTGACACAGAGTTACCTTTATCCCCAACT +
Preference number: 6 (lower is better)
Translates to: LPSEGLVSSEVAFVV*SPRFADTELPLSPT
Trigger: AGTTGGGGATAAAGGTAACTCTGTGTCAGCAAATCTTGGCGACAACACAACAAATGCAACTTCAGAAGAGACTAGTCCCTCTGAAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS TCA 72 bp GGTCTCAAGGCTATCTCGGTAGTTACCTTCAGCATCTaGAGAACTCAGCAAATGCGATTTTGTTTCGGAGCT +
Preference number: 6 (lower is better)
Translates to: GLKAISVVTFSI*RTQQMRFCFGA
Trigger: AGCTCCGAAACAAAATCGCATTTGCTGAGTTCTTCAGATGCTGAAGGTAACTACCGAGATAGCCTTGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS TCA 72 bp TTGCTTATCGCCTTTTTCTACCTTGATCACAGTTTTTaGTTCTGTGGCCACTGTGGAGGTCATCGTGGTGAC +
Preference number: 6 (lower is better)
Translates to: LLIAFFYLDHSF*FCGHCGGHRGD
Trigger: GTCACCACGATGACCTCCACAGTGGCCACAGAATCAAAAACTGTGATCAAGGTAGAAAAAGGCGATAAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS TCA 72 bp CTGAAGAGATGTATGTGGTTGAATTGGAATCGGTTGTaGGGTTGTAGTCTGAACCTGGGATTGTTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: LKRCMWLNWNRL*GCSLNLGLLSR
Trigger: CCTGGACAACAATCCCAGGTTCAGACTACAACCTCACAACCGATTCCAATTCAACCACATACATCTCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000580465.5
ENST00000644067.1
CDS CAA 72 bp GTGAGGCTGACTATGTCAACTGTTGAGGTCACTGGCTaGAGGCATATCCTTCCAAAGGTAAATACTGGTTCT +
Preference number: 6 (lower is better)
Translates to: VRLTMSTVEVTG*RHILPKVNTGS
Trigger: AGAACCAGTATTTACCTTTGGAAGGATATGCCTCAAGCCAGTGACCTCAACAGTTGACATAGTCAGCCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584931.1
CDS CAA 90 bp TTTGATCTTGTTCTCTACTGGTCCATATGGGTAGTCCTCTGCCTCTaGGTAAGGAAGAACGTGATGGTACTCCTTATCACTCTCACAGTA +
Preference number: 6 (lower is better)
Translates to: FDLVLYWSIWVVLCL*VRKNVMVLLITLTV
Trigger: TACTGTGAGAGTGATAAGGAGTACCATCACGTTCTTCCTTACCAAGAGGCAGAGGACTACCCATATGGACCAGTAGAGAACAAGATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp CTGAACATCCCTGAATCAAGTCCTCAGGTTGATCATTATTTGCATTaGGGCTCTGTTCTTGTCTCATCGAGTCACTCTGACACCCTTCTT +
Preference number: 6 (lower is better)
Translates to: LNIPESSPQVDHYLH*GSVLVSSSHSDTLL
Trigger: AAGAAGGGTGTCAGAGTGACTCGATGAGACAAGAACAGAGCCCAAATGCAAATAATGATCAACCTGAGGACTTGATTCAGGGATGTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp CACTTTCTGAACATCCCTGAATCAAGTCCTCAGGTTGATCATTATTaGCATTTGGGCTCTGTTCTTGTCTCATCGAGTCACTCTGACACC +
Preference number: 6 (lower is better)
Translates to: HFLNIPESSPQVDHY*HLGSVLVSSSHSDT
Trigger: GGTGTCAGAGTGACTCGATGAGACAAGAACAGAGCCCAAATGCAAATAATGATCAACCTGAGGACTTGATTCAGGGATGTTCAGAAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp CTTGAAAATTTCATCAGTTTCACTTTGTCTCGTGTGGAATACTCTTaGCTCACAGTCATAGATGTAACCAGTGTGCCTCCCGTGGTGGTC +
Preference number: 6 (lower is better)
Translates to: LENFISFTLSRVEYS*LTVIDVTSVPPVVV
Trigger: GACCACCACGGGAGGCACACTGGTTACATCTATGACTGTGAGCAAAGAGTATTCCACACGAGACAAAGTGAAACTGATGAAATTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp GTTGGCTCCTCAGATTTTCCTTGCTCAGGGTCATCATCTGGTGTTTaGTCGTCACTGTCTTTTTCAAGGGACTGGTCTTCAAATTCTTCT +
Preference number: 6 (lower is better)
Translates to: VGSSDFPCSGSSSGV*SSLSFSRDWSSNSS
Trigger: AGAAGAATTTGAAGACCAGTCCCTTGAAAAAGACAGTGACGACAAAACACCAGATGATGACCCTGAGCAAGGAAAATCTGAGGAGCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS TCA 72 bp GCATTTGGGCTCTGTTCTTGTCTCATCGAGTCACTCTaGCACCCTTCTTTTGCTTTCGTTATTACTGGTGAT +
Preference number: 6 (lower is better)
Translates to: AFGLCSCLIESL*HPSFAFVITGD
Trigger: ATCACCAGTAATAACGAAAGCAAAAGAAGGGTGTCAGAGTGACTCGATGAGACAAGAACAGAGCCCAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS TCA 72 bp GTCACATCCCAGTTTTCCTTCAAAGTCCATTGCTCTTaGCAGAGGTGTGGCATCTCTGTCATTGGTACTTTT +
Preference number: 6 (lower is better)
Translates to: VTSQFSFKVHCS*QRCGISVIGTF
Trigger: AAAAGTACCAATGACAGAGATGCCACACCTCTGTCAAGAGCAATGGACTTTGAAGGAAAACTGGGATGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS GCA 72 bp TTCTCCGATTTGAAATCACCTACCTCAGATTTTCCTTaGTCAGGGTCATCATCTGGTGTTTTGTCGTCACTG +
Preference number: 6 (lower is better)
Translates to: FSDLKSPTSDFP*SGSSSGVLSSL
Trigger: CAGTGACGACAAAACACCAGATGATGACCCTGAGCAAGGAAAATCTGAGGTAGGTGATTTCAAATCGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306378.11
CDS CCA 72 bp TCGAAGGCCTTTCCTCTGAGGTGTAGGCGTTTCTTTTaGTGTTTCTGGAACTCCAATGGGACAAATGATTTT +
Preference number: 6 (lower is better)
Translates to: SKAFPLRCRRFF*CFWNSNGTNDF
Trigger: AAAATCATTTGTCCCATTGGAGTTCCAGAAACACCAAAAGAAACGCCTACACCTCAGAGGAAAGGCCTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000582467.1
ENST00000644067.1
CDS CAA 72 bp ATATGCTCATTAGGCACCATTAAATCCTCAGAGGACTaGGGAAATTCAAGGGGCGGGATGTCTTTTTCTTCC +
Preference number: 6 (lower is better)
Translates to: ICSLGTIKSSED*GNSRGGMSFSS
Trigger: GGAAGAAAAAGACATCCCGCCCCTTGAATTTCCCAAGTCCTCTGAGGATTTAATGGTGCCTAATGAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp TCAGATTTTCCTTGCTCAGGGTCATCATCTGGTGTTTaGTCGTCACTGTCTTTTTCAAGGGACTGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: SDFPCSGSSSGV*SSLSFSRDWSS
Trigger: TGAAGACCAGTCCCTTGAAAAAGACAGTGACGACAAAACACCAGATGATGACCCTGAGCAAGGAAAATCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544491.2
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp CTTCTCCGATTTGAAATCACCTACCTCAGATTTTCCTaGCTCAGGGTCATCATCTGGTGTTTTGTCGTCACT +
Preference number: 6 (lower is better)
Translates to: LLRFEITYLRFS*LRVIIWCFVVT
Trigger: AGTGACGACAAAACACCAGATGATGACCCTGAGCAAGGAAAATCTGAGGTAGGTGATTTCAAATCGGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306378.11
CDS CAA 72 bp CTCAGGTTGATCATTATTTGCATTTGGGCTCTGTTCTaGTCTCATCGAGTCACTCTGACACCCTTCTTTTGC +
Preference number: 6 (lower is better)
Translates to: LRLIIICIWALF*SHRVTLTPFFC
Trigger: GCAAAAGAAGGGTGTCAGAGTGACTCGATGAGACAAGAACAGAGCCCAAATGCAAATAATGATCAACCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp AGTCACATCCCAGTTTTCCTTCAAAGTCCATTGCTCTaGACAGAGGTGTGGCATCTCTGTCATTGGTACTTT +
Preference number: 6 (lower is better)
Translates to: SHIPVFLQSPLL*TEVWHLCHWYF
Trigger: AAAGTACCAATGACAGAGATGCCACACCTCTGTCAAGAGCAATGGACTTTGAAGGAAAACTGGGATGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp TTCATCAGTTTCACTTTGTCTCGTGTGGAATACTCTTaGCTCACAGTCATAGATGTAACCAGTGTGCCTCCC +
Preference number: 6 (lower is better)
Translates to: FISFTLSRVEYS*LTVIDVTSVPP
Trigger: GGGAGGCACACTGGTTACATCTATGACTGTGAGCAAAGAGTATTCCACACGAGACAAAGTGAAACTGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp TCACCTACCTCAGATTTTCCTTGCTCAGGGTCATCATCTGGTGTTTaGTCGTCACTGTCTTTTTCAAGGGACTGGTCTTCAAATTCTTCT +
Preference number: 6 (lower is better)
Translates to: SPTSDFPCSGSSSGV*SSLSFSRDWSSNSS
Trigger: AGAAGAATTTGAAGACCAGTCCCTTGAAAAAGACAGTGACGACAAAACACCAGATGATGACCCTGAGCAAGGAAAATCTGAGGTAGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306378.11
CDS CAA 90 bp CCTTCAAAGTCCATTGCTCTTGACAGAGGTGTGGCATCTCTGTCATaGGTACTTTTAGGCACTGATGAATGTAAAGCACTCTTGGAAGAA +
Preference number: 6 (lower is better)
Translates to: PSKSIALDRGVASLS*VLLGTDECKALLEE
Trigger: TTCTTCCAAGAGTGCTTTACATTCATCAGTGCCTAAAAGTACCAATGACAGAGATGCCACACCTCTGTCAAGAGCAATGGACTTTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp GGTTCTTCCTCAGATTTTCCTTGCTCAGGGTCATCATCTGGTGTTTaGTCGTCACTGTCTTTTTCAAGGGACTGGTCTTCAAATTCTTCT +
Preference number: 6 (lower is better)
Translates to: GSSSDFPCSGSSSGV*SSLSFSRDWSSNSS
Trigger: AGAAGAATTTGAAGACCAGTCCCTTGAAAAAGACAGTGACGACAAAACACCAGATGATGACCCTGAGCAAGGAAAATCTGAGGAAGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544491.2
CDS TCA 72 bp GAACATGTCTCACAGCAAAGCAAATCCCCAAGTTTGTaGCAAACCCTACAATGGTCATCATACTGTATCACC +
Preference number: 6 (lower is better)
Translates to: EHVSQQSKSPSL*QTLQWSSYCIT
Trigger: GGTGATACAGTATGATGACCATTGTAGGGTTTGTCACAAACTTGGGGATTTGCTTTGCTGTGAGACATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS TCA 72 bp AAGAAACCACAGTTTGCTTATCGCCTTTTTCTACCTTaGTCACAGTTTTTGATTCTGTGGCCACTGTGGAGG +
Preference number: 6 (lower is better)
Translates to: KKPQFAYRLFLP*SQFLILWPLWR
Trigger: CCTCCACAGTGGCCACAGAATCAAAAACTGTGATCAAGGTAGAAAAAGGCGATAAGCAAACTGTGGTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS GCA 72 bp AAAGGTAGTATTGGAAGTGTCTTCTTCACGCAGAACTaGTTTCAAAAGCACAACATGCATCTCTGCCATGAG +
Preference number: 6 (lower is better)
Translates to: KGSIGSVFFTQN*FQKHNMHLCHE
Trigger: CTCATGGCAGAGATGCATGTTGTGCTTTTGAAAGCAGTTCTGCGTGAAGAAGACACTTCCAATACTACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS GCA 72 bp ACATCCCTGAATCAAGTCCTCAGGTTGATCATTATTTaGATTTGGGCTCTGTTCTTGTCTCATCGAGTCACT +
Preference number: 6 (lower is better)
Translates to: TSLNQVLRLIII*IWALFLSHRVT
Trigger: AGTGACTCGATGAGACAAGAACAGAGCCCAAATGCAAATAATGATCAACCTGAGGACTTGATTCAGGGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CCA 72 bp CCAAGTGATGCCAAAGGTCGGTCTAGGAGAAGGATATaGCCATATATCCAAAGCAGGTTTTGCATTGTAATT +
Preference number: 6 (lower is better)
Translates to: PSDAKGRSRRRI*PYIQSRFCIVI
Trigger: AATTACAATGCAAAACCTGCTTTGGATATATGGCCATATCCTTCTCCTAGACCGACCTTTGGCATCACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp ACGCTATCTTTCAGATCAGCAGGTCCAAAGGTAGTATaGGAAGTGTCTTCTTCACGCAGAACTGCTTTCAAA +
Preference number: 6 (lower is better)
Translates to: TLSFRSAGPKVV*EVSSSRRTAFK
Trigger: TTTGAAAGCAGTTCTGCGTGAAGAAGACACTTCCAATACTACCTTTGGACCTGCTGATCTGAAAGATAGCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp AACATCCCTGAATCAAGTCCTCAGGTTGATCATTATTaGCATTTGGGCTCTGTTCTTGTCTCATCGAGTCAC +
Preference number: 6 (lower is better)
Translates to: NIPESSPQVDHY*HLGSVLVSSSH
Trigger: GTGACTCGATGAGACAAGAACAGAGCCCAAATGCAAATAATGATCAACCTGAGGACTTGATTCAGGGATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp GAAGAAACCACAGTTTGCTTATCGCCTTTTTCTACCTaGATCACAGTTTTTGATTCTGTGGCCACTGTGGAG +
Preference number: 6 (lower is better)
Translates to: EETTVCLSPFST*ITVFDSVATVE
Trigger: CTCCACAGTGGCCACAGAATCAAAAACTGTGATCAAGGTAGAAAAAGGCGATAAGCAAACTGTGGTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp TATCAACTGCAACTGTCCAGTAGTTTGACCTTGTCCTaGAATTACTACTGTCAAACCTTGATTGCCACCGTG +
Preference number: 6 (lower is better)
Translates to: YQLQLSSSLTLS*NYYCQTLIATV
Trigger: CACGGTGGCAATCAAGGTTTGACAGTAGTAATTCAAGGACAAGGTCAAACTACTGGACAGTTGCAGTTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000577770.1
ENST00000580465.5
ENST00000584931.1
ENST00000644067.1
CDS CAA 72 bp CTTCTGAAGTTGCATTTGTTGTGTTGTCGCCAAGATTaGCTGACACAGAGTTACCTTTATCCCCAACTTCTG +
Preference number: 6 (lower is better)
Translates to: LLKLHLLCCRQD*LTQSYLYPQLL
Trigger: CAGAAGTTGGGGATAAAGGTAACTCTGTGTCAGCAAATCTTGGCGACAACACAACAAATGCAACTTCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp GAGGGACTAGTCTCTTCTGAAGTTGCATTTGTTGTGTaGTCGCCAAGATTTGCTGACACAGAGTTACCTTTA +
Preference number: 6 (lower is better)
Translates to: EGLVSSEVAFVV*SPRFADTELPL
Trigger: TAAAGGTAACTCTGTGTCAGCAAATCTTGGCGACAACACAACAAATGCAACTTCAGAAGAGACTAGTCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp GTGGAATTAACGCTATCTTTCAGATCAGCAGGTCCAAAGGTAGTATaGGAAGTGTCTTCTTCACGCAGAACTGCTTTCAAAAGCACAACA +
Preference number: 6 (lower is better)
Translates to: VELTLSFRSAGPKVV*EVSSSRRTAFKSTT
Trigger: TGTTGTGCTTTTGAAAGCAGTTCTGCGTGAAGAAGACACTTCCAATACTACCTTTGGACCTGCTGATCTGAAAGATAGCGTTAATTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000335221.9
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp TGTGACTCTGTTTTCATGTCATCGTCTACTTCCATTGGTTCTTCCTaGCAGGGTTTATCACTGTCAGAATCTAAGAGCTCCTTCACATCT +
Preference number: 6 (lower is better)
Translates to: CDSVFMSSSTSIGSS*QGLSLSESKSSFTS
Trigger: AGATGTGAAGGAGCTCTTAGATTCTGACAGTGATAAACCCTGCAAGGAAGAACCAATGGAAGTAGACGATGACATGAAAACAGAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp AATCAAGTCCTCAGGTTGATCATTATTTGCATTTGGGCTCTGTTCTaGTCTCATCGAGTCACTCTGACACCCTTCTTTTGCTTTCGTTAT +
Preference number: 6 (lower is better)
Translates to: NQVLRLIIICIWALF*SHRVTLTPFFCFRY
Trigger: ATAACGAAAGCAAAAGAAGGGTGTCAGAGTGACTCGATGAGACAAGAACAGAGCCCAAATGCAAATAATGATCAACCTGAGGACTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp GGTCATATCTGCCACAAATTCCGTCAGCTTTTCATAATATCGTCTTaGTACTCTTTCTTCCATGGTGGCAAGGTCCATAGGTTCCTTAAT +
Preference number: 6 (lower is better)
Translates to: GHICHKFRQLFIISS*YSFFHGGKVHRFLN
Trigger: ATTAAGGAACCTATGGACCTTGCCACCATGGAAGAAAGAGTACAAAGACGATATTATGAAAAGCTGACGGAATTTGTGGCAGATATGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000578307.1
ENST00000581258.5
ENST00000644067.1
CDS CAA 90 bp GAAGAAGAAACAATGGTGTCACTTTCCTCCTGTATGAGCGGTTTTTaGTTCTTACAGATCAAAGTACCAATATCATCTGCACTGGCTAGT +
Preference number: 6 (lower is better)
Translates to: EEETMVSLSSCMSGF*FLQIKVPISSALAS
Trigger: ACTAGCCAGTGCAGATGATATTGGTACTTTGATCTGTAAGAACAAAAAACCGCTCATACAGGAGGAAAGTGACACCATTGTTTCTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 90 bp TTCTATAGGATGGCAGAGCTGTACCTGAACGAGTCTTCTTTGGTCTaGAAAATTTCATCAGTTTCACTTTGTCTCGTGTGGAATACTCTT +
Preference number: 6 (lower is better)
Translates to: FYRMAELYLNESSLV*KISSVSLCLVWNTL
Trigger: AAGAGTATTCCACACGAGACAAAGTGAAACTGATGAAATTTTCAAGACCAAAGAAGACTCGTTCAGGTACAGCTCTGCCATCCTATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp GTTCTTGTCTCATCGAGTCACTCTGACACCCTTCTTTaGCTTTCGTTATTACTGGTGATTCAGAGAGATTTT +
Preference number: 6 (lower is better)
Translates to: VLVSSSHSDTLL*LSLLLVIQRDF
Trigger: AAAATCTCTCTGAATCACCAGTAATAACGAAAGCAAAAGAAGGGTGTCAGAGTGACTCGATGAGACAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp ATGCTTCATCACCACCTGTTTCTGAATGATTTCACTTaGATTAGAAGCTTGGAGGGTGTGTTCACGCTTAAT +
Preference number: 6 (lower is better)
Translates to: MLHHHLFLNDFT*IRSLEGVFTLN
Trigger: ATTAAGCGTGAACACACCCTCCAAGCTTCTAATCAAAGTGAAATCATTCAGAAACAGGTGGTGATGAAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000644067.1
CDS CAA 90 bp CAAATTTTCTATAGGATGGCAGAGCTGTACCTGAACGAGTCTTCTTaGGTCTTGAAAATTTCATCAGTTTCACTTTGTCTCGTGTGGAAT +
Preference number: 6 (lower is better)
Translates to: QIFYRMAELYLNESS*VLKISSVSLCLVWN
Trigger: ATTCCACACGAGACAAAGTGAAACTGATGAAATTTTCAAGACCAAAGAAGACTCGTTCAGGTACAGCTCTGCCATCCTATAGAAAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1
CDS CAA 72 bp ACAATGGTGTCACTTTCCTCCTGTATGAGCGGTTTTTaGTTCTTACAGATCAAAGTACCAATATCATCTGCA +
Preference number: 6 (lower is better)
Translates to: TMVSLSSCMSGF*FLQIKVPISSA
Trigger: TGCAGATGATATTGGTACTTTGATCTGTAAGAACAAAAAACCGCTCATACAGGAGGAAAGTGACACCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306378.11
ENST00000321892.8
ENST00000342579.8
ENST00000424123.7
ENST00000544778.6
ENST00000644067.1