RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BORA (Homo sapiens)

Ensembl gene IDs: ENSG00000136122

Ensembl transcript IDs: ENST00000377814.6, ENST00000390667.11, ENST00000464754.1, ENST00000613797.4, ENST00000618209.5, ENST00000651376.1, ENST00000651477.1, ENST00000652266.1

Found 321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTGGTTCTCCCACATTCTTATTCTCCCACATCCCTACCCACGTTTaGGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTA +
Preference number: 1 (lower is better)
Translates to: LGSPTFLFSHIPTHV*AGKDVPTLGMRYIL
Trigger: TAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATGTGGGAGAATAAGAATGTGGGAGAACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR CCA 90 bp TTCTCCCACATTCTTATTCTCCCACATCCCTACCCACGTTTGAGCTaGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTG +
Preference number: 1 (lower is better)
Translates to: FSHILILPHPYPRLS*KGCPYPRHEVYFIL
Trigger: CAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATGTGGGAGAATAAGAATGTGGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR CCA 90 bp GCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTaGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGAT +
Preference number: 1 (lower is better)
Translates to: AGKDVPTLGMRYILF*APHICPIDNNTRDD
Trigger: ATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR GCA 90 bp CCTACCCTAGGCATGAGGTATATTTTATTCTGGGCACCACACATTTaGCCCATAGATAACAATACACGTGATGATGTCACTAGTACTACC +
Preference number: 1 (lower is better)
Translates to: PTLGMRYILFWAPHI*PIDNNTRDDVTSTT
Trigger: GGTAGTACTAGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAATAAAATATACCTCATGCCTAGGGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR TCA 90 bp CTCATCTTCACCTTGAGTCTCAAGAGTAAAAGGTATCTGAATCACTaGGGTCCGATACTGAGTACCACCACTATACATCTGAAGTCTCAT +
Preference number: 1 (lower is better)
Translates to: LIFTLSLKSKRYLNH*GPILSTTTIHLKSH
Trigger: ATGAGACTTCAGATGTATAGTGGTGGTACTCAGTATCGGACCTCAGTGATTCAGATACCTTTTACTCTTGAGACTCAAGGTGAAGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR TCA 90 bp TCAACATCCTGCAACAGTGCTAATTCTTTCTCAGAAGCACTGGACTaGTTTTGTGTAACAGACATGGCAGTCACAACCAAATGTGTACCA +
Preference number: 1 (lower is better)
Translates to: STSCNSANSFSEALD*FCVTDMAVTTKCVP
Trigger: TGGTACACATTTGGTTGTGACTGCCATGTCTGTTACACAAAATCAGTCCAGTGCTTCTGAGAAAGAATTAGCACTGTTGCAGGATGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR TCA 90 bp TGCTTTCAGCAAGAGGTGACATGCACATATGAGAGTTTTCAATACTaGAGGCAATGCCACTTACAAAATCAGTCATGGGTAAACTGCCAT +
Preference number: 1 (lower is better)
Translates to: CFQQEVTCTYESFQY*RQCHLQNQSWVNCH
Trigger: ATGGCAGTTTACCCATGACTGATTTTGTAAGTGGCATTGCCTTCAGTATTGAAAACTCTCATATGTGCATGTCACCTCTTGCTGAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR TCA 90 bp AATGTTACTGCTTTCACAAGGAATGACACTGCTTTCAGCAAGAGGTaGCATGCACATATGAGAGTTTTCAATACTGAAGGCAATGCCACT +
Preference number: 1 (lower is better)
Translates to: NVTAFTRNDTAFSKR*HAHMRVFNTEGNAT
Trigger: AGTGGCATTGCCTTCAGTATTGAAAACTCTCATATGTGCATGTCACCTCTTGCTGAAAGCAGTGTCATTCCTTGTGAAAGCAGTAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR TCA 90 bp TATTATAGCCACTATCCATCTGAATGTTACTGCTTTCACAAGGAATaGCACTGCTTTCAGCAAGAGGTGACATGCACATATGAGAGTTTT +
Preference number: 1 (lower is better)
Translates to: YYSHYPSECYCFHKE*HCFQQEVTCTYESF
Trigger: AAAACTCTCATATGTGCATGTCACCTCTTGCTGAAAGCAGTGTCATTCCTTGTGAAAGCAGTAACATTCAGATGGATAGTGGCTATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR GCA 90 bp CTCAACTTCACATGTTTGTGCATCACTTTCTTTGCAGTAACTTTCTaGCCCAACTGTATCCATAATATTGCTTCCACAATTCTGCGTATT +
Preference number: 1 (lower is better)
Translates to: LNFTCLCITFFAVTF*PNCIHNIASTILRI
Trigger: AATACGCAGAATTGTGGAAGCAATATTATGGATACAGTTGGGGCAGAAAGTTACTGCAAAGAAAGTGATGCACAAACATGTGAAGTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR GCA 90 bp CTTCATATTAAATGCTTGAGATTTACTCTCAACTTCACATGTTTGTaGATCACTTTCTTTGCAGTAACTTTCTGCCCCAACTGTATCCAT +
Preference number: 1 (lower is better)
Translates to: LHIKCLRFTLNFTCL*ITFFAVTFCPNCIH
Trigger: ATGGATACAGTTGGGGCAGAAAGTTACTGCAAAGAAAGTGATGCACAAACATGTGAAGTTGAGAGTAAATCTCAAGCATTTAATATGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR-3UTR TCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTACAGTCACCATCATGTTaGTCCTGTGCACAACGATAT +
Preference number: 2 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVQSPSC*SCAQRY
Trigger: ATATCGTTGTGCACAGGATCAACATGATGGTGACTG...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR-3UTR GCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATGGGCACCACACATTTaGCCCATAGATAACAATACA +
Preference number: 2 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVWAPHI*PIDNNT
Trigger: TGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCA...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR-3UTR TCA 90 bp GGAGAAGCCGAAGGTAAGGAGTCGGAGATGCTTCCGTTCCCATCTAAAAACAGCAGGTTTCCAGGAGATTaGTCTGCAAATTCATCAGCT +
Preference number: 2 (lower is better)
Translates to: GEAEGKESEMLPFPSKNSRFPGD*SANSSA
Trigger: AGCTGATGAATTTGCAGATCAATCTCCTGGAAACCT...GCTGTTTTTAGATGGGAACGGAAGCATCTCCGACTCCTTACCTTCGGCTTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR-3UTR GCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTAGTGCACAACGATATATaGGAGGAACTCTTAAGCTTA +
Preference number: 2 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVVHNDI*EELLSL
Trigger: TAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCAC...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR-3UTR CCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAATACCCACGTTTGAGCTaGAAAGGATGTCCCTACCCT +
Preference number: 2 (lower is better)
Translates to: YNIHICPSVTSQAYALREYPRLS*KGCPYP
Trigger: AGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTA...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR CAA 90 bp TCTTGGTTCTCCCACATTCTTATTCTCCCACATCCCTACCCACGTTaGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTT +
Preference number: 2 (lower is better)
Translates to: SWFSHILILPHPYPR*SWKGCPYPRHEVYF
Trigger: AAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATGTGGGAGAATAAGAATGTGGGAGAACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR-3UTR TCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAACAGTCACCATCATGTTaGTCCTGTGCACAACGATAT +
Preference number: 2 (lower is better)
Translates to: YNIHICPSVTSQAYALREQSPSC*SCAQRY
Trigger: ATATCGTTGTGCACAGGATCAACATGATGGTGACTG...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR-3UTR TCA 90 bp CTGCCATTATCAACCGGCTCCTTAATCCAAGTGGTCTCATCTGCTATCTCTATAACTGAGGTCCGATACTaGGTACCACCACTATACATC +
Preference number: 2 (lower is better)
Translates to: LPLSTGSLIQVVSSAISITEVRY*VPPLYI
Trigger: GATGTATAGTGGTGGTACTCAGTATCGGACCTCAGT...TATAGAGATAGCAGATGAGACCACTTGGATTAAGGAGCCGGTTGATAATGGCAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR-3UTR TCA 90 bp CTGCCATTATCAACCGGCTCCTTAATCCAAGTGGTCTCATCTGCTATCTCTATAAGGTATCTGAATCACTaGGGTCCGATACTGAGTACC +
Preference number: 2 (lower is better)
Translates to: LPLSTGSLIQVVSSAISIRYLNH*GPILST
Trigger: GGTACTCAGTATCGGACCTCAGTGATTCAGATACCT...TATAGAGATAGCAGATGAGACCACTTGGATTAAGGAGCCGGTTGATAATGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR-3UTR GCA 90 bp GGAGAAGCCGAAGGTAAGGAGTCGGAGATGCTTCCGTTCCCATCTAAAAACAGCTCCAGGAGATTGATCTaGAAATTCATCAGCTCTAAA +
Preference number: 2 (lower is better)
Translates to: GEAEGKESEMLPFPSKNSSRRLI*KFISSK
Trigger: TTTAGAGCTGATGAATTTGCAGATCAATCTCCTGGA...GCTGTTTTTAGATGGGAACGGAAGCATCTCCGACTCCTTACCTTCGGCTTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR-3UTR TCA 90 bp TTACTGCTTTCACAAGGAATGACACTGCTTTCAGCAAGAGGTGACATGCACATACTTTCTTCTGAGGGATaGAGAACTGAGGTTTCCAGG +
Preference number: 2 (lower is better)
Translates to: LLLSQGMTLLSARGDMHILSSEG*RTEVSR
Trigger: CCTGGAAACCTCAGTTCTTCATCCCTCAGAAGAAAG...TATGTGCATGTCACCTCTTGCTGAAAGCAGTGTCATTCCTTGTGAAAGCAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR-3UTR TCA 90 bp CTGCCATTATCAACCGGCTCCTTAATCCAAGTGGTCTCATCTGCTATCTCTATACCACCACTATACATCTaGAGTCTCATAGGAGACCAA +
Preference number: 2 (lower is better)
Translates to: LPLSTGSLIQVVSSAISIPPLYI*SLIGDQ
Trigger: TTGGTCTCCTATGAGACTTCAGATGTATAGTGGTGG...TATAGAGATAGCAGATGAGACCACTTGGATTAAGGAGCCGGTTGATAATGGCAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR-3UTR GCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAATCATGTTGATCCTGTaGACAACGATATATGCGAGG +
Preference number: 2 (lower is better)
Translates to: YNIHICPSVTSQAYALREIMLIL*TTIYAR
Trigger: CCTCGCATATATCGTTGTGCACAGGATCAACATGAT...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR-3UTR CCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAAGGTATATTTTATTCTaGGCACCACACATTTGCCCC +
Preference number: 2 (lower is better)
Translates to: YNIHICPSVTSQAYALRERYILF*APHICP
Trigger: GGGGCAAATGTGTGGTGCCCAGAATAAAATATACCT...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR-3UTR GCA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTATCATGTTGATCCTGTaGACAACGATATATGCGAGG +
Preference number: 2 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTIMLIL*TTIYAR
Trigger: CCTCGCATATATCGTTGTGCACAGGATCAACATGAT...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR-3UTR TCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACATGTCAGTAAGCCCTTaGTTTTTCACATTAAGGAGG +
Preference number: 2 (lower is better)
Translates to: LYITYISAPVLLHRPMPYMSVSP*FFTLRR
Trigger: CCTCCTTAATGTGAAAAATCAAGGGCTTACTGACAT...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR-3UTR TCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACTATAATTCAGCAACTTaGAGTTCCAGGAGCATTTCT +
Preference number: 2 (lower is better)
Translates to: LYITYISAPVLLHRPMPYYNSAT*SSRSIS
Trigger: AGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATA...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR-3UTR TCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATATGTCAGTAAGCCCTTaGTTTTTCACATTAAGGAGG +
Preference number: 2 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNMSVSP*FFTLRR
Trigger: CCTCCTTAATGTGAAAAATCAAGGGCTTACTGACAT...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR-3UTR TCA 90 bp ACAGTGTTATTGTCTTTCTCCCTTTCAACATCCTGCAACAGTGCTAATTCTTTCAGAATTTGTTCCAGATaGAGCATCAGGAGAATGAAC +
Preference number: 2 (lower is better)
Translates to: TVLLSFSLSTSCNSANSFRICSR*SIRRMN
Trigger: GTTCATTCTCCTGATGCTTCATCTGGAACAAATTCT...GAAAGAATTAGCACTGTTGCAGGATGTTGAAAGGGAGAAAGACAATAACACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR-3UTR GCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATGTGCACAACGATATATaGGAGGAACTCTTAAGCTTA +
Preference number: 2 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNVHNDI*EELLSL
Trigger: TAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCAC...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR CAA 90 bp TTGCTTCATATTAAATGCTTGAGATTTACTCTCAACTTCACATGTTaGTGCATCACTTTCTTTGCAGTAACTTTCTGCCCCAACTGTATC +
Preference number: 2 (lower is better)
Translates to: LLHIKCLRFTLNFTC*CITFFAVTFCPNCI
Trigger: GATACAGTTGGGGCAGAAAGTTACTGCAAAGAAAGTGATGCACAAACATGTGAAGTTGAGAGTAAATCTCAAGCATTTAATATGAAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR-3UTR GCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTGTGCACAACGATATATaGGAGGAACTCTTAAGCTTA +
Preference number: 2 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCVHNDI*EELLSL
Trigger: TAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCAC...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
3UTR TCA 72 bp CCCACATTCTTATTCTCCCACATCCCTACCCACGTTTaGGCTGGAAAGGATGTCCCTACCCTAGGCATGAGG +
Preference number: 3 (lower is better)
Translates to: PTFLFSHIPTHV*AGKDVPTLGMR
Trigger: CCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATGTGGGAGAATAAGAATGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR GCA 72 bp AAATGTGTACCATGGGTAGAAGCCTCATTACTAAACTaGCGTAGGTGTATTCCAGCAGCATCCATGGCGGGT +
Preference number: 3 (lower is better)
Translates to: KCVPWVEASLLN*RRCIPAASMAG
Trigger: ACCCGCCATGGATGCTGCTGGAATACACCTACGGCAGTTTAGTAATGAGGCTTCTACCCATGGTACACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR-3UTR CAA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAACCAGTCACCATCATGTaGATCCTGTGCACAACGATA +
Preference number: 3 (lower is better)
Translates to: YNIHICPSVTSQAYALREPVTIM*ILCTTI
Trigger: TATCGTTGTGCACAGGATCAACATGATGGTGACTGG...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR CCA 72 bp ATTCTTATTCTCCCACATCCCTACCCACGTTTGAGCTaGAAAGGATGTCCCTACCCTAGGCATGAGGTATAT +
Preference number: 3 (lower is better)
Translates to: ILILPHPYPRLS*KGCPYPRHEVY
Trigger: ATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATGTGGGAGAATAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR CCA 72 bp GTAACAGACATGGCAGTCACAACCAAATGTGTACCATaGGTAGAAGCCTCATTACTAAACTGCCGTAGGTGT +
Preference number: 3 (lower is better)
Translates to: VTDMAVTTKCVP*VEASLLNCRRC
Trigger: ACACCTACGGCAGTTTAGTAATGAGGCTTCTACCCATGGTACACATTTGGTTGTGACTGCCATGTCTGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR-3UTR CAA 90 bp GAGAAAGTGGGTGAAGAAATAGGCGAAGGACTAGTTATGCTTCCCAAGCTGTATGAGGTTTCCAGGAGATaGATCTGCAAATTCATCAGC +
Preference number: 3 (lower is better)
Translates to: EKVGEEIGEGLVMLPKLYEVSRR*ICKFIS
Trigger: GCTGATGAATTTGCAGATCAATCTCCTGGAAACCTC...ATACAGCTTGGGAAGCATAACTAGTCCTTCGCCTATTTCTTCACCCACTTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR TCA 72 bp GCTTTCACAAGGAATGACACTGCTTTCAGCAAGAGGTaGCATGCACATATGAGAGTTTTCAATACTGAAGGC +
Preference number: 3 (lower is better)
Translates to: AFTRNDTAFSKR*HAHMRVFNTEG
Trigger: GCCTTCAGTATTGAAAACTCTCATATGTGCATGTCACCTCTTGCTGAAAGCAGTGTCATTCCTTGTGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR CCA 72 bp GATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTaGGCACCACACATTTGCCCCATAGATAACAATACA +
Preference number: 3 (lower is better)
Translates to: DVPTLGMRYILF*APHICPIDNNT
Trigger: TGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR-3UTR CAA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATCCAGTCACCATCATGTaGATCCTGTGCACAACGATA +
Preference number: 3 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNPVTIM*ILCTTI
Trigger: TATCGTTGTGCACAGGATCAACATGATGGTGACTGG...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR TCA 72 bp TGCAACAGTGCTAATTCTTTCTCAGAAGCACTGGACTaGTTTTGTGTAACAGACATGGCAGTCACAACCAAA +
Preference number: 3 (lower is better)
Translates to: CNSANSFSEALD*FCVTDMAVTTK
Trigger: TTTGGTTGTGACTGCCATGTCTGTTACACAAAATCAGTCCAGTGCTTCTGAGAAAGAATTAGCACTGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR TCA 72 bp CACTATCCATCTGAATGTTACTGCTTTCACAAGGAATaGCACTGCTTTCAGCAAGAGGTGACATGCACATAT +
Preference number: 3 (lower is better)
Translates to: HYPSECYCFHKE*HCFQQEVTCTY
Trigger: ATATGTGCATGTCACCTCTTGCTGAAAGCAGTGTCATTCCTTGTGAAAGCAGTAACATTCAGATGGATAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR GCA 72 bp GGCATGAGGTATATTTTATTCTGGGCACCACACATTTaGCCCATAGATAACAATACACGTGATGATGTCACT +
Preference number: 3 (lower is better)
Translates to: GMRYILFWAPHI*PIDNNTRDDVT
Trigger: AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAATAAAATATACCTCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR GCA 72 bp ATTATCAACCGGCTCCTTAATCCAAGTGGTCTCATCTaGTATCTCTATAGGATCAACCATATCCACAGTGTT +
Preference number: 3 (lower is better)
Translates to: IINRLLNPSGLI*YLYRINHIHSV
Trigger: AACACTGTGGATATGGTTGATCCTATAGAGATAGCAGATGAGACCACTTGGATTAAGGAGCCGGTTGATAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
3UTR-3UTR CAA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTCCAGTCACCATCATGTaGATCCTGTGCACAACGATA +
Preference number: 3 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCPVTIM*ILCTTI
Trigger: TATCGTTGTGCACAGGATCAACATGATGGTGACTGG...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTAGCCCCCAACCCTACGTaGCCACTCTTTCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVAPNPT*PLFLVP
Trigger: GGGCACCAGAAAGAGTGGCCACGTAGGGTTGGGGGC...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613797.4
CDS-3UTR CCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATGCAGCCGGCTTCCCTaGATGGAGTGCGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVCSRLP*MECEGG
Trigger: GCCTCCTTCGCACTCCATCCAGGGAAGCCGGCTGCA...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613797.4
CDS-3UTR CCA 90 bp CACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGAATGCTTCCGCGCTGTCTTaGGCCAACCAGGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: HRKRQQCLTSSIAFLRMNASALS*ANQGTG
Trigger: CCCCGTGCCCTGGTTGGCCCAAGACAGCGCGGAAGC...ATTCATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618209.5
CDS-3UTR CCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCGCCGGCTTCCCTGGATaGAGTGCGAAGGAGGCGTCG +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGAGFPG*SAKEAS
Trigger: CGACGCCTCCTTCGCACTCCATCCAGGGAAGCCGGC...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613797.4
CDS-3UTR GCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTACCCGAACTTGGTGTCTaGAAGGGGCTCCTACACTTT +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVPELGV*KGLLHF
Trigger: AAAGTGTAGGAGCCCCTTGCAGACACCAAGTTCGGG...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATACTTCACAGGCCTATaGCCTACGGGAACTCCACTC +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVYFTGL*PTGTPL
Trigger: GAGTGGAGTTCCCGTAGGGCATAGGCCTGTGAAGTA...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCGCTTCCGCGCTGTCTTaGGCCAACCAGGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVASALS*ANQGTG
Trigger: CCCCGTGCCCTGGTTGGCCCAAGACAGCGCGGAAGC...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652266.1
CDS-3UTR TCA 90 bp CCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGAAAGGGCACGGGGCTTGTaGGCGACTAGCCAATCGTGT +
Preference number: 4 (lower is better)
Translates to: PQEETAMSDKQHRFSQNERARGL*ATSQSC
Trigger: ACACGATTGGCTAGTCGCTCACAAGCCCCGTGCCCT...TTCATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618209.5
CDS-3UTR GCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTAACAGAGAGAAAACGGTaGGTACAAAACGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVTERKR*VQNEAP
Trigger: GGGGGCTTCGTTTTGTACGCACCGTTTTCTCTCTGT...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390667.11
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCCTTCCCTGGATGGAGTaGGAAGGAGGCGTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVLPWME*EGGVAP
Trigger: GGGGGCGACGCCTCCTTCGCACTCCATCCAGGGAAG...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR CCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATACCCACGTTTGAGCTaGAAAGGATGTCCCTACCCT +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVYPRLS*KGCPYP
Trigger: AGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTA...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCGCCGGCTTCCCTGGATaGAGTGCGAAGGAGGCGTCG +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVAGFPG*SAKEAS
Trigger: CGACGCCTCCTTCGCACTCCATCCAGGGAAGCCGGC...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR GCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTACAGTCATGGGTAAACTaGCATTATCAACCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVQSWVN*HYQPAP
Trigger: AGGAGCCGGTTGATAATGGCAGTTTACCCATGACTG...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCTGCAGCCGGCTTCCCTaGATGGAGTGCGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVCSRLP*MECEGG
Trigger: GCCTCCTTCGCACTCCATCCAGGGAAGCCGGCTGCA...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
3UTR CAA 72 bp TCCCACATTCTTATTCTCCCACATCCCTACCCACGTTaGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: SHILILPHPYPR*SWKGCPYPRHE
Trigger: CTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATGTGGGAGAATAAGAATGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTAGCTTTCAGCAAGAGGTaGCATGCACATATGAGAGTT +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVAFSKR*HAHMRV
Trigger: AACTCTCATATGTGCATGTCACCTCTTGCTGAAAGC...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATGCTTTCACAAGGAATaGCACTGCTTTCAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVCFHKE*HCFQQE
Trigger: CTCTTGCTGAAAGCAGTGTCATTCCTTGTGAAAGCA...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCAGGGCACGGGGCTTGTaGGCGACTAGCCAATCGTGT +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVRARGL*ATSQSC
Trigger: ACACGATTGGCTAGTCGCTCACAAGCCCCGTGCCCT...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTAGTAAGGAGTCGGAGATaGTTCCGTTCCCATCTAAAA +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVVRSRR*FRSHLK
Trigger: TTTTAGATGGGAACGGAAGCATCTCCGACTCCTTAC...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCCACCTACTCCCTGACTaGTCCCATTCACCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVHLLPD*SHSPGA
Trigger: CGCCCCTGGTGAATGGGAGCAGTCAGGGAGTAGGTG...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR GCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAGGCCACTCTTTCTGGTaGCCCTCTCTTCCACACCTA +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALREGHSFW*PSLPHL
Trigger: TAGGTGTGGAAGAGAGGGGCACCAGAAAGAGTGGCC...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613797.4
CDS-3UTR CCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAAAACTGCCCCGAACTTaGTGTCTGCAAGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALREKLPRT*CLQGAP
Trigger: AGGAGCCCCTTGCAGACACCAAGTTCGGGGCAGTTT...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTAAGGTTTCCAGGAGATTaGTCTGCAAATTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVRFPGD*SANSSA
Trigger: AGCTGATGAATTTGCAGATCAATCTCCTGGAAACCT...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATCAGAAGCACTGGACTaGTTTTGTGTAACAGACATG +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVSEALD*FCVTDM
Trigger: CATGTCTGTTACACAAAATCAGTCCAGTGCTTCTGA...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAATCCCTACCCACGTTTaGGCTGGAAAGGATGTCCCT +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALREIPTHV*AGKDVP
Trigger: AGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGAT...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCATCCCTACCCACGTTTaGGCTGGAAAGGATGTCCCT +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGIPTHV*AGKDVP
Trigger: AGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGAT...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAACCCGAACTTGGTGTCTaGAAGGGGCTCCTACACTTT +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALREPELGV*KGLLHF
Trigger: AAAGTGTAGGAGCCCCTTGCAGACACCAAGTTCGGG...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCCCCGAACTTGGTGTCTaGAAGGGGCTCCTACACTTT +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGPELGV*KGLLHF
Trigger: AAAGTGTAGGAGCCCCTTGCAGACACCAAGTTCGGG...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCCGTGGCCACTCTTTCTaGTGCCCCTCTCTTCCACAC +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVRGHSF*CPSLPH
Trigger: GTGTGGAAGAGAGGGGCACCAGAAAGAGTGGCCACG...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR TCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTAGAAGCATCAGGAGAATaGACAGTAAACTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVEASGE*TVNFLC
Trigger: ACAAAGGAAGTTTACTGTTCATTCTCCTGATGCTTC...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTAAGAATTTGTTCCAGATaGAGCATCAGGAGAATGAAC +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVRICSR*SIRRMN
Trigger: GTTCATTCTCCTGATGCTTCATCTGGAACAAATTCT...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp GGAGAAGCCGAAGGTAAGGAGTCGGAGATGCTTCCGTTCCCATCTAAAAACAGCTCAGAAGCACTGGACTaGTTTTGTGTAACAGACATG +
Preference number: 4 (lower is better)
Translates to: GEAEGKESEMLPFPSKNSSEALD*FCVTDM
Trigger: CATGTCTGTTACACAAAATCAGTCCAGTGCTTCTGA...GCTGTTTTTAGATGGGAACGGAAGCATCTCCGACTCCTTACCTTCGGCTTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTATCCCTACCCACGTTTaGGCTGGAAAGGATGTCCCT +
Preference number: 4 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTIPTHV*AGKDVP
Trigger: AGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGAT...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCCTACTTCTGGAAGGTTaGGATGCAGCCGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVLLLEG*DAAGFP
Trigger: AGGGAAGCCGGCTGCATCTCAACCTTCCAGAAGTAG...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR GCA 90 bp CCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGAAACAGAGAGAAAACGGTaGGTACAAAACGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PQEETAMSDKQHRFSQNETERKR*VQNEAP
Trigger: GGGGGCTTCGTTTTGTACGCACCGTTTTCTCTCTGT...TTCATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618209.5
ENST00000651376.1
CDS-3UTR GCA 90 bp CTGCCATTATCAACCGGCTCCTTAATCCAAGTGGTCTCATCTGCTATCTCTATACCCGAACTTGGTGTCTaGAAGGGGCTCCTACACTTT +
Preference number: 4 (lower is better)
Translates to: LPLSTGSLIQVVSSAISIPELGV*KGLLHF
Trigger: AAAGTGTAGGAGCCCCTTGCAGACACCAAGTTCGGG...TATAGAGATAGCAGATGAGACCACTTGGATTAAGGAGCCGGTTGATAATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR GCA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTTACTTCACAGGCCTATaGCCTACGGGAACTCCACTC +
Preference number: 4 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTYFTGL*PTGTPL
Trigger: GAGTGGAGTTCCCGTAGGGCATAGGCCTGTGAAGTA...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTCTTCCCTGGATGGAGTaGGAAGGAGGCGTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCLPWME*EGGVAP
Trigger: GGGGGCGACGCCTCCTTCGCACTCCATCCAGGGAAG...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR CCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTAACCAAATGTGTACCATaGGTAGAAGCCTCATTACTA +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVTKCVP*VEASLL
Trigger: TAGTAATGAGGCTTCTACCCATGGTACACATTTGGT...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCCGTAGGAAATTCGAATaGCAACTCCTCGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGRRKFE*QLLAPR
Trigger: ACGTGGAGCGAGGAGTTGCCATTCGAATTTCCTACG...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652266.1
CDS-3UTR TCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAAGAGACAGCAATGTCTaGCAAGCAGCATCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALRERDSNV*QAASLF
Trigger: GAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCT...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp AAAATCCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAACAGAGAGAAAACGGTaGGTACAAAACGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: KIHRKRQQCLTSSIAFLRTERKR*VQNEAP
Trigger: GGGGGCTTCGTTTTGTACGCACCGTTTTCTCTCTGT...TCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618209.5
ENST00000651376.1
CDS-3UTR GCA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTACAGAGAGAAAACGGTaGGTACAAAACGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTTERKR*VQNEAP
Trigger: GGGGGCTTCGTTTTGTACGCACCGTTTTCTCTCTGT...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390667.11
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCCCCGAACTTGGTGTCTaGAAGGGGCTCCTACACTTT +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVPELGV*KGLLHF
Trigger: AAAGTGTAGGAGCCCCTTGCAGACACCAAGTTCGGG...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCCAGTCATGGGTAAACTaGCATTATCAACCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGQSWVN*HYQPAP
Trigger: AGGAGCCGGTTGATAATGGCAGTTTACCCATGACTG...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATTTGCAGTAACTTTCTaGCCCAACTGTATCCATAAT +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVFAVTF*PNCIHN
Trigger: ATTATGGATACAGTTGGGGCAGAAAGTTACTGCAAA...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCTACTTCACAGGCCTATaGCCTACGGGAACTCCACTC +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVYFTGL*PTGTPL
Trigger: GAGTGGAGTTCCCGTAGGGCATAGGCCTGTGAAGTA...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATGAGCGTACCTACCGGTaGGTACAAAACGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNERTYR*VQNEAP
Trigger: GGGGGCTTCGTTTTGTACGCACCGGTAGGTACGCTC...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613797.4
CDS-3UTR CCA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTACACCTCTGTGTTGTGTaGTCTTGCTTCATATTAAAT +
Preference number: 4 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVHLCVV*SCFILN
Trigger: ATTTAATATGAAGCAAGACCACACAACACAGAGGTG...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp AAAATCCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGACGTAGGAAATTCGAATaGCAACTCCTCGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: KIHRKRQQCLTSSIAFLRRRKFE*QLLAPR
Trigger: ACGTGGAGCGAGGAGTTGCCATTCGAATTTCCTACG...TCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618209.5
CDS-3UTR CCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATCGTGGCCACTCTTTCTaGTGCCCCTCTCTTCCACAC +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNRGHSF*CPSLPH
Trigger: GTGTGGAAGAGAGGGGCACCAGAAAGAGTGGCCACG...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613797.4
CDS-3UTR CCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTGCCCCCAACCCTACGTaGCCACTCTTTCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCAPNPT*PLFLVP
Trigger: GGGCACCAGAAAGAGTGGCCACGTAGGGTTGGGGGC...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR TCA 90 bp CACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGAATAGAGACAGCAATGTCTaGCAAGCAGCATCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: HRKRQQCLTSSIAFLRMNRDSNV*QAASLF
Trigger: GAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCT...ATTCATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618209.5
ENST00000651376.1
CDS-3UTR TCA 90 bp GAGAAAGTGGGTGAAGAAATAGGCGAAGGACTAGTTATGCTTCCCAAGCTGTATAGAGACAGCAATGTCTaGCAAGCAGCATCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: EKVGEEIGEGLVMLPKLYRDSNV*QAASLF
Trigger: GAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCT...ATACAGCTTGGGAAGCATAACTAGTCCTTCGCCTATTTCTTCACCCACTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp CATCCATGGCGGGTGATGAGACATCTGTGGAAGGAATATTCTCTTTATCTTCCTCTTTCTTCTGAGGGATaGAGAACTGAGGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HPWRVMRHLWKEYSLYLPLSSEG*RTEVSR
Trigger: CCTGGAAACCTCAGTTCTTCATCCCTCAGAAGAAAG...AGGAAGATAAAGAGAATATTCCTTCCACAGATGTCTCATCACCCGCCATGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAACCACCACTATACATCTaGAGTCTCATAGGAGACCAA +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALREPPLYI*SLIGDQ
Trigger: TTGGTCTCCTATGAGACTTCAGATGTATAGTGGTGG...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTACTGAGGTCCGATACTaGGTACCACCACTATACATC +
Preference number: 4 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTTEVRY*VPPLYI
Trigger: GATGTATAGTGGTGGTACTCAGTATCGGACCTCAGT...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCCATGGCGGGTGATGAGACATCTGTGGAAGGAATATTCTCTTTATCTTCCTACTGAGGTCCGATACTaGGTACCACCACTATACATC +
Preference number: 4 (lower is better)
Translates to: HPWRVMRHLWKEYSLYLPTEVRY*VPPLYI
Trigger: GATGTATAGTGGTGGTACTCAGTATCGGACCTCAGT...AGGAAGATAAAGAGAATATTCCTTCCACAGATGTCTCATCACCCGCCATGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp AAAATCCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAAGGTATCTGAATCACTaGGGTCCGATACTGAGTACC +
Preference number: 4 (lower is better)
Translates to: KIHRKRQQCLTSSIAFLRRYLNH*GPILST
Trigger: GGTACTCAGTATCGGACCTCAGTGATTCAGATACCT...TCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR GCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAGTAAGGAGTCGGAGATaGTTCCGTTCCCATCTAAAA +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALREVRSRR*FRSHLK
Trigger: TTTTAGATGGGAACGGAAGCATCTCCGACTCCTTAC...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCCATTCTATGGACTGCTaGATTGAAAAGGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGHSMDC*IEKGLL
Trigger: CAGCAAGCCCTTTTCAATGCAGCAGTCCATAGAATG...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTCACCTACTCCCTGACTaGTCCCATTCACCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCHLLPD*SHSPGA
Trigger: CGCCCCTGGTGAATGGGAGCAGTCAGGGAGTAGGTG...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR CCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATAAACTGCCCCGAACTTaGTGTCTGCAAGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNKLPRT*CLQGAP
Trigger: AGGAGCCCCTTGCAGACACCAAGTTCGGGGCAGTTT...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCGACAGAGGCATTCTATaGACTGCTGCATTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGDRGIL*TAALKR
Trigger: CCTTTTCAATGCAGCAGTCCATAGAATGCCTCTGTC...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAGACAGAGGCATTCTATaGACTGCTGCATTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALREDRGIL*TAALKR
Trigger: CCTTTTCAATGCAGCAGTCCATAGAATGCCTCTGTC...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCTACCCACGTTTGAGCTaGAAAGGATGTCCCTACCCT +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVYPRLS*KGCPYP
Trigger: AGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTA...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAAGGTTTCCAGGAGATTaGTCTGCAAATTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALRERFPGD*SANSSA
Trigger: AGCTGATGAATTTGCAGATCAATCTCCTGGAAACCT...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACCTTTCTTCTGAGGGATaGAGAACTGAGGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYLSSEG*RTEVSR
Trigger: CCTGGAAACCTCAGTTCTTCATCCCTCAGAAGAAAG...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCCTTTCTTCTGAGGGATaGAGAACTGAGGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVLSSEG*RTEVSR
Trigger: CCTGGAAACCTCAGTTCTTCATCCCTCAGAAGAAAG...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp AGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGAATGGTCAGCTTCCACCACTATACATCTaGAGTCTCATAGGAGACCAA +
Preference number: 4 (lower is better)
Translates to: RQQCLTSSIAFLRMNGQLPPLYI*SLIGDQ
Trigger: TTGGTCTCCTATGAGACTTCAGATGTATAGTGGTGG...AAGCTGACCATTCATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCAGGTATCTGAATCACTaGGGTCCGATACTGAGTACC +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVRYLNH*GPILST
Trigger: GGTACTCAGTATCGGACCTCAGTGATTCAGATACCT...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACAGGTATCTGAATCACTaGGGTCCGATACTGAGTACC +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYRYLNH*GPILST
Trigger: GGTACTCAGTATCGGACCTCAGTGATTCAGATACCT...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAATCCTCATCTTCACCTTaGGTCTCAAGAGTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALRESSSSP*VSRVKG
Trigger: ACCTTTTACTCTTGAGACTCAAGGTGAAGATGAGGA...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCTCCTCATCTTCACCTTaGGTCTCAAGAGTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGSSSSP*VSRVKG
Trigger: ACCTTTTACTCTTGAGACTCAAGGTGAAGATGAGGA...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp CACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGAATGCTTTCAGCAAGAGGTaGCATGCACATATGAGAGTT +
Preference number: 4 (lower is better)
Translates to: HRKRQQCLTSSIAFLRMNAFSKR*HAHMRV
Trigger: AACTCTCATATGTGCATGTCACCTCTTGCTGAAAGC...ATTCATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTTGCTTTCACAAGGAATaGCACTGCTTTCAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTCFHKE*HCFQQE
Trigger: CTCTTGCTGAAAGCAGTGTCATTCCTTGTGAAAGCA...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAATTTTCCCCACAGAGGTaGACAGACCAAGAACTAAAA +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALREFSPQR*TDQELK
Trigger: TTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAAAA...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp AATCCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGCCTCATTACTAAACTaGCGTAGGTGTATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: NPQEETAMSDKQHRFSQNASLLN*RRCIPA
Trigger: TGCTGGAATACACCTACGGCAGTTTAGTAATGAGGC...ATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR GCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCCCAAGTGGTCTCATCTaGTATCTCTATAGGATCAAC +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGPSGLI*YLYRIN
Trigger: GTTGATCCTATAGAGATAGCAGATGAGACCACTTGG...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAACCAAGTGGTCTCATCTaGTATCTCTATAGGATCAAC +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALREPSGLI*YLYRIN
Trigger: GTTGATCCTATAGAGATAGCAGATGAGACCACTTGG...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCCAGTCATGGGTAAACTaGCATTATCAACCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVQSWVN*HYQPAP
Trigger: AGGAGCCGGTTGATAATGGCAGTTTACCCATGACTG...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp TTACTGCTTTCACAAGGAATGACACTGCTTTCAGCAAGAGGTGACATGCACATACAGTCATGGGTAAACTaGCATTATCAACCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLLSQGMTLLSARGDMHIQSWVN*HYQPAP
Trigger: AGGAGCCGGTTGATAATGGCAGTTTACCCATGACTG...TATGTGCATGTCACCTCTTGCTGAAAGCAGTGTCATTCCTTGTGAAAGCAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR GCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCGTGCATCACTTTCTTTaGAGTAACTTTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGVHHFL*SNFLPQ
Trigger: TTGGGGCAGAAAGTTACTGCAAAGAAAGTGATGCAC...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCGCATTGAAAAGGGCTTaGTGTTTTCATCCAACACCT +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGALKRA*CFHPTP
Trigger: AGGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGC...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTGAGCGTACCTACCGGTaGGTACAAAACGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCERTYR*VQNEAP
Trigger: GGGGGCTTCGTTTTGTACGCACCGGTAGGTACGCTC...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR CCA 90 bp GGAGAAGCCGAAGGTAAGGAGTCGGAGATGCTTCCGTTCCCATCTAAAAACAGCAGACCAATTTTTAATTaGCGAGCAGCCATCTATATA +
Preference number: 4 (lower is better)
Translates to: GEAEGKESEMLPFPSKNSRPIFN*RAAIYI
Trigger: TATATAGATGGCTGCTCGCCAATTAAAAATTGGTCT...GCTGTTTTTAGATGGGAACGGAAGCATCTCCGACTCCTTACCTTCGGCTTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR CCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCAGGTATATTTTATTCTaGGCACCACACATTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGRYILF*APHICP
Trigger: GGGGCAAATGTGTGGTGCCCAGAATAAAATATACCT...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACAGGCAAGTCAGGAGCTaGGAAAAGAAACCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYRQVRS*EKKPLH
Trigger: ATGGAGAGGTTTCTTTTCCCAGCTCCTGACTTGCCT...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613797.4
CDS-3UTR TCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCGGAGTCTCTCCTATCTaGAATTCAATTGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGGVSPI*NSIGEK
Trigger: TTTCTCACCAATTGAATTTCAGATAGGAGAGACTCC...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAGAAGCATCAGGAGAATaGACAGTAAACTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALREEASGE*TVNFLC
Trigger: ACAAAGGAAGTTTACTGTTCATTCTCCTGATGCTTC...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCAGAATTTGTTCCAGATaGAGCATCAGGAGAATGAAC +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGRICSR*SIRRMN
Trigger: GTTCATTCTCCTGATGCTTCATCTGGAACAAATTCT...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCGAGAGTTTTCAATACTaGAGGCAATGCCACTTACAA +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGESFQY*RQCHLQ
Trigger: TTGTAAGTGGCATTGCCTTCAGTATTGAAAACTCTC...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAGAGAGTTTTCAATACTaGAGGCAATGCCACTTACAA +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALREESFQY*RQCHLQ
Trigger: TTGTAAGTGGCATTGCCTTCAGTATTGAAAACTCTC...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCTGCTTTCACAAGGAATaGCACTGCTTTCAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVCFHKE*HCFQQE
Trigger: CTCTTGCTGAAAGCAGTGTCATTCCTTGTGAAAGCA...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACTGCTTTCACAAGGAATaGCACTGCTTTCAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYCFHKE*HCFQQE
Trigger: CTCTTGCTGAAAGCAGTGTCATTCCTTGTGAAAGCA...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCCAGTCACCATCATGTTaGTCCTGTGCACAACGATAT +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVQSPSC*SCAQRY
Trigger: ATATCGTTGTGCACAGGATCAACATGATGGTGACTG...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAATGTCAGTAAGCCCTTaGTTTTTCACATTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALREMSVSP*FFTLRR
Trigger: CCTCCTTAATGTGAAAAATCAAGGGCTTACTGACAT...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTCTACTTCTGGAAGGTTaGGATGCAGCCGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCLLLEG*DAAGFP
Trigger: AGGGAAGCCGGCTGCATCTCAACCTTCCAGAAGTAG...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCGCCTCATTACTAAACTaGCGTAGGTGTATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVASLLN*RRCIPA
Trigger: TGCTGGAATACACCTACGGCAGTTTAGTAATGAGGC...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp GTAACAGACATGGCAGTCACAACCAAATGTGTACCATGGGTAGAAGCCTCATTACCAAGTGGTCTCATCTaGTATCTCTATAGGATCAAC +
Preference number: 4 (lower is better)
Translates to: VTDMAVTTKCVPWVEASLPSGLI*YLYRIN
Trigger: GTTGATCCTATAGAGATAGCAGATGAGACCACTTGG...TAATGAGGCTTCTACCCATGGTACACATTTGGTTGTGACTGCCATGTCTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR GCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCCAGCAAGAGGTGACATaGACATATGAGAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGQQEVT*TYESFQ
Trigger: TTGAAAACTCTCATATGTGCATGTCACCTCTTGCTG...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTGTGCATCACTTTCTTTaGAGTAACTTTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTVHHFL*SNFLPQ
Trigger: TTGGGGCAGAAAGTTACTGCAAAGAAAGTGATGCAC...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp AATCCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGCATTGAAAAGGGCTTaGTGTTTTCATCCAACACCT +
Preference number: 4 (lower is better)
Translates to: NPQEETAMSDKQHRFSQNALKRA*CFHPTP
Trigger: AGGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGC...ATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR GCA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTGCATTGAAAAGGGCTTaGTGTTTTCATCCAACACCT +
Preference number: 4 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTALKRA*CFHPTP
Trigger: AGGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGC...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCCATTCTATGGACTGCTaGATTGAAAAGGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVHSMDC*IEKGLL
Trigger: CAGCAAGCCCTTTTCAATGCAGCAGTCCATAGAATG...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAGTGCACAACGATATATaGGAGGAACTCTTAAGCTTA +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALREVHNDI*EELLSL
Trigger: TAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCAC...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTTGGGCACCACACATTTaGCCCATAGATAACAATACA +
Preference number: 4 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTWAPHI*PIDNNT
Trigger: TGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCA...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTGGCCACTCTTTCTGGTaGCCCTCTCTTCCACACCTA +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCGHSFW*PSLPHL
Trigger: TAGGTGTGGAAGAGAGGGGCACCAGAAAGAGTGGCC...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR CCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCACCAAATGTGTACCATaGGTAGAAGCCTCATTACTA +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGTKCVP*VEASLL
Trigger: TAGTAATGAGGCTTCTACCCATGGTACACATTTGGT...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp ATCCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGACCAAATGTGTACCATaGGTAGAAGCCTCATTACTA +
Preference number: 4 (lower is better)
Translates to: IHRKRQQCLTSSIAFLRMTKCVP*VEASLL
Trigger: TAGTAATGAGGCTTCTACCCATGGTACACATTTGGT...CATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR CCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGACAGAGGCATTCTATaGACTGCTGCATTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYDRGIL*TAALKR
Trigger: CCTTTTCAATGCAGCAGTCCATAGAATGCCTCTGTC...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCGACAGAGGCATTCTATaGACTGCTGCATTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVDRGIL*TAALKR
Trigger: CCTTTTCAATGCAGCAGTCCATAGAATGCCTCTGTC...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CCA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTAGGTATATTTTATTCTaGGCACCACACATTTGCCCC +
Preference number: 4 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTRYILF*APHICP
Trigger: GGGGCAAATGTGTGGTGCCCAGAATAAAATATACCT...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCAAAAGAGTCTACTTCTaGAAGGTTGAGATGCAGCCG +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVKRVYF*KVEMQP
Trigger: CGGCTGCATCTCAACCTTCCAGAAGTAGACTCTTTT...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR TCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATAGAGACAGCAATGTCTaGCAAGCAGCATCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNRDSNV*QAASLF
Trigger: GAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCT...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACAGGTTTCCAGGAGATTaGTCTGCAAATTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYRFPGD*SANSSA
Trigger: AGCTGATGAATTTGCAGATCAATCTCCTGGAAACCT...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCCATGGCGGGTGATGAGACATCTGTGGAAGGAATATTCTCTTTATCTTCCTGAAGCATCAGGAGAATaGACAGTAAACTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: HPWRVMRHLWKEYSLYLPEASGE*TVNFLC
Trigger: ACAAAGGAAGTTTACTGTTCATTCTCCTGATGCTTC...AGGAAGATAAAGAGAATATTCCTTCCACAGATGTCTCATCACCCGCCATGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATACTGAGGTCCGATACTaGGTACCACCACTATACATC +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNTEVRY*VPPLYI
Trigger: GATGTATAGTGGTGGTACTCAGTATCGGACCTCAGT...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATAGGTATCTGAATCACTaGGGTCCGATACTGAGTACC +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNRYLNH*GPILST
Trigger: GGTACTCAGTATCGGACCTCAGTGATTCAGATACCT...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp ATTAAAATCCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCTCCTCATCTTCACCTTaGGTCTCAAGAGTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: IKIHRKRQQCLTSSIAFLSSSSP*VSRVKG
Trigger: ACCTTTTACTCTTGAGACTCAAGGTGAAGATGAGGA...GAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGGATTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp CATCCATGGCGGGTGATGAGACATCTGTGGAAGGAATATTCTCTTTATCTTCCTGGTGACATGCACATATaGGAGTTTTCAATACTGAAG +
Preference number: 4 (lower is better)
Translates to: HPWRVMRHLWKEYSLYLPGDMHI*EFSILK
Trigger: CTTCAGTATTGAAAACTCTCATATGTGCATGTCACC...AGGAAGATAAAGAGAATATTCCTTCCACAGATGTCTCATCACCCGCCATGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACTTTTCCCCACAGAGGTaGACAGACCAAGAACTAAAA +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYFSPQR*TDQELK
Trigger: TTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAAAA...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp AAAATCCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGATCCCTTTCAACATCCTaGAACAGTGCTAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: KIHRKRQQCLTSSIAFLRSLSTS*NSANSF
Trigger: GAAAGAATTAGCACTGTTGCAGGATGTTGAAAGGGA...TCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCCCAAGTGGTCTCATCTaGTATCTCTATAGGATCAAC +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVPSGLI*YLYRIN
Trigger: GTTGATCCTATAGAGATAGCAGATGAGACCACTTGG...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp CACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGAATCAGCAAGAGGTGACATaGACATATGAGAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: HRKRQQCLTSSIAFLRMNQQEVT*TYESFQ
Trigger: TTGAAAACTCTCATATGTGCATGTCACCTCTTGCTG...ATTCATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR GCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCTTTGCAGTAACTTTCTaGCCCAACTGTATCCATAAT +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGFAVTF*PNCIHN
Trigger: ATTATGGATACAGTTGGGGCAGAAAGTTACTGCAAA...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp ATCCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGTTTGCAGTAACTTTCTaGCCCAACTGTATCCATAAT +
Preference number: 4 (lower is better)
Translates to: IHRKRQQCLTSSIAFLRMFAVTF*PNCIHN
Trigger: ATTATGGATACAGTTGGGGCAGAAAGTTACTGCAAA...CATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR GCA 90 bp TTACTGCTTTCACAAGGAATGACACTGCTTTCAGCAAGAGGTGACATGCACATAGTGCATCACTTTCTTTaGAGTAACTTTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LLLSQGMTLLSARGDMHIVHHFL*SNFLPQ
Trigger: TTGGGGCAGAAAGTTACTGCAAAGAAAGTGATGCAC...TATGTGCATGTCACCTCTTGCTGAAAGCAGTGTCATTCCTTGTGAAAGCAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR GCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGCATTGAAAAGGGCTTaGTGTTTTCATCCAACACCT +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYALKRA*CFHPTP
Trigger: AGGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGC...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCGCATTGAAAAGGGCTTaGTGTTTTCATCCAACACCT +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVALKRA*CFHPTP
Trigger: AGGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGC...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCATCATGTTGATCCTGTaGACAACGATATATGCGAGG +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVIMLIL*TTIYAR
Trigger: CCTCGCATATATCGTTGTGCACAGGATCAACATGAT...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACATCATGTTGATCCTGTaGACAACGATATATGCGAGG +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYIMLIL*TTIYAR
Trigger: CCTCGCATATATCGTTGTGCACAGGATCAACATGAT...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACTGGGCACCACACATTTaGCCCATAGATAACAATACA +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYWAPHI*PIDNNT
Trigger: TGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCA...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCTATAACATACATATCTaGCCCAGTGTTACTTCACAG +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGYNIHI*PSVTSQ
Trigger: CTGTGAAGTAACACTGGGGCAGATATGTATGTTATA...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAACACCTCTGTGTTGTGTaGTCTTGCTTCATATTAAAT +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALREHLCVV*SCFILN
Trigger: ATTTAATATGAAGCAAGACCACACAACACAGAGGTG...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCAGGTATATTTTATTCTaGGCACCACACATTTGCCCC +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVRYILF*APHICP
Trigger: GGGGCAAATGTGTGGTGCCCAGAATAAAATATACCT...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp ACTGAGGTTTCCAGGAGATTGATCTGCAAATTCATCAGCTCTAAAATAGTCACCAGGTTTCCAGGAGATTaGTCTGCAAATTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: TEVSRRLICKFISSKIVTRFPGD*SANSSA
Trigger: AGCTGATGAATTTGCAGATCAATCTCCTGGAAACCT...GGTGACTATTTTAGAGCTGATGAATTTGCAGATCAATCTCCTGGAAACCTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCGGAGTCTCTCCTATCTaGAATTCAATTGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVGVSPI*NSIGEK
Trigger: TTTCTCACCAATTGAATTTCAGATAGGAGAGACTCC...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCAGAATTTGTTCCAGATaGAGCATCAGGAGAATGAAC +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVRICSR*SIRRMN
Trigger: GTTCATTCTCCTGATGCTTCATCTGGAACAAATTCT...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCGAGAGTTTTCAATACTaGAGGCAATGCCACTTACAA +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVESFQY*RQCHLQ
Trigger: TTGTAAGTGGCATTGCCTTCAGTATTGAAAACTCTC...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCGGTGACATGCACATATaGGAGTTTTCAATACTGAAG +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVGDMHI*EFSILK
Trigger: CTTCAGTATTGAAAACTCTCATATGTGCATGTCACC...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp ACAGTGTTATTGTCTTTCTCCCTTTCAACATCCTGCAACAGTGCTAATTCTTTCTGCTTTCACAAGGAATaGCACTGCTTTCAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: TVLLSFSLSTSCNSANSFCFHKE*HCFQQE
Trigger: CTCTTGCTGAAAGCAGTGTCATTCCTTGTGAAAGCA...GAAAGAATTAGCACTGTTGCAGGATGTTGAAAGGGAGAAAGACAATAACACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATCAGTCACCATCATGTTaGTCCTGTGCACAACGATAT +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNQSPSC*SCAQRY
Trigger: ATATCGTTGTGCACAGGATCAACATGATGGTGACTG...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTTATAATTCAGCAACTTaGAGTTCCAGGAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTYNSAT*SSRSIS
Trigger: AGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATA...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp CAATGCCACTTACAAAATCAGTCATGGGTAAACTGCCATTATCAACCGGCTCCTTCCAGGAGATTGATCTaGAAATTCATCAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: QCHLQNQSWVNCHYQPAPSRRLI*KFISSK
Trigger: TTTAGAGCTGATGAATTTGCAGATCAATCTCCTGGA...AGGAGCCGGTTGATAATGGCAGTTTACCCATGACTGATTTTGTAAGTGGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR GCA 90 bp CCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGAAGTTTCTGGTGTTATTTaGATCTTTGATTCCTTGACA +
Preference number: 4 (lower is better)
Translates to: PQEETAMSDKQHRFSQNEVSGVI*IFDSLT
Trigger: TGTCAAGGAATCAAAGATGCAAATAACACCAGAAAC...TTCATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618209.5
ENST00000651376.1
CDS-3UTR GCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATGCCTCATTACTAAACTaGCGTAGGTGTATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNASLLN*RRCIPA
Trigger: TGCTGGAATACACCTACGGCAGTTTAGTAATGAGGC...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCTCCCTTTCAACATCCTaGAACAGTGCTAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVSLSTS*NSANSF
Trigger: GAAAGAATTAGCACTGTTGCAGGATGTTGAAAGGGA...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACCAGCAAGAGGTGACATaGACATATGAGAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYQQEVT*TYESFQ
Trigger: TTGAAAACTCTCATATGTGCATGTCACCTCTTGCTG...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCCAGCAAGAGGTGACATaGACATATGAGAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVQQEVT*TYESFQ
Trigger: TTGAAAACTCTCATATGTGCATGTCACCTCTTGCTG...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATCATTCTATGGACTGCTaGATTGAAAAGGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNHSMDC*IEKGLL
Trigger: CAGCAAGCCCTTTTCAATGCAGCAGTCCATAGAATG...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGTGCACAACGATATATaGGAGGAACTCTTAAGCTTA +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYVHNDI*EELLSL
Trigger: TAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCAC...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCGTGCACAACGATATATaGGAGGAACTCTTAAGCTTA +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVVHNDI*EELLSL
Trigger: TAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCAC...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CCA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCAGACCAATTTTTAATTaGCGAGCAGCCATCTATATA +
Preference number: 4 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGRPIFN*RAAIYI
Trigger: TATATAGATGGCTGCTCGCCAATTAAAAATTGGTCT...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAAGACCAATTTTTAATTaGCGAGCAGCCATCTATATA +
Preference number: 4 (lower is better)
Translates to: YNIHICPSVTSQAYALRERPIFN*RAAIYI
Trigger: TATATAGATGGCTGCTCGCCAATTAAAAATTGGTCT...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCACCAAATGTGTACCATaGGTAGAAGCCTCATTACTA +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVTKCVP*VEASLL
Trigger: TAGTAATGAGGCTTCTACCCATGGTACACATTTGGT...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CCA 90 bp AGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGAATGGTCAGCTTCACCTCTGTGTTGTGTaGTCTTGCTTCATATTAAAT +
Preference number: 4 (lower is better)
Translates to: RQQCLTSSIAFLRMNGQLHLCVV*SCFILN
Trigger: ATTTAATATGAAGCAAGACCACACAACACAGAGGTG...AAGCTGACCATTCATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTAGAGACAGCAATGTCTaGCAAGCAGCATCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCRDSNV*QAASLF
Trigger: GAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCT...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTCTTTCTTCTGAGGGATaGAGAACTGAGGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCLSSEG*RTEVSR
Trigger: CCTGGAAACCTCAGTTCTTCATCCCTCAGAAGAAAG...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp GTCCAAGGAGAGGGTACGATGACATCTTTAGTGAAAAACTCTTCAATGGCTTTTGGAGTCTCTCCTATCTaGAATTCAATTGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: VQGEGTMTSLVKNSSMAFGVSPI*NSIGEK
Trigger: TTTCTCACCAATTGAATTTCAGATAGGAGAGACTCC...AAAAGCCATTGAAGAGTTTTTCACTAAAGATGTCATCGTACCCTCTCCTTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp ACTGAGGTTTCCAGGAGATTGATCTGCAAATTCATCAGCTCTAAAATAGTCACCAGAATTTGTTCCAGATaGAGCATCAGGAGAATGAAC +
Preference number: 4 (lower is better)
Translates to: TEVSRRLICKFISSKIVTRICSR*SIRRMN
Trigger: GTTCATTCTCCTGATGCTTCATCTGGAACAAATTCT...GGTGACTATTTTAGAGCTGATGAATTTGCAGATCAATCTCCTGGAAACCTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTACTGAGGTCCGATACTaGGTACCACCACTATACATC +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCTEVRY*VPPLYI
Trigger: GATGTATAGTGGTGGTACTCAGTATCGGACCTCAGT...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATTCCTCATCTTCACCTTaGGTCTCAAGAGTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNSSSSP*VSRVKG
Trigger: ACCTTTTACTCTTGAGACTCAAGGTGAAGATGAGGA...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATTCAGAAGCACTGGACTaGTTTTGTGTAACAGACATG +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNSEALD*FCVTDM
Trigger: CATGTCTGTTACACAAAATCAGTCCAGTGCTTCTGA...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR TCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCTATAATTCAGCAACTTaGAGTTCCAGGAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVYNSAT*SSRSIS
Trigger: AGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATA...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACTCCAGGAGATTGATCTaGAAATTCATCAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYSRRLI*KFISSK
Trigger: TTTAGAGCTGATGAATTTGCAGATCAATCTCCTGGA...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCTCCAGGAGATTGATCTaGAAATTCATCAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVSRRLI*KFISSK
Trigger: TTTAGAGCTGATGAATTTGCAGATCAATCTCCTGGA...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp GTAACAGACATGGCAGTCACAACCAAATGTGTACCATGGGTAGAAGCCTCATTAGTTTCTGGTGTTATTTaGATCTTTGATTCCTTGACA +
Preference number: 4 (lower is better)
Translates to: VTDMAVTTKCVPWVEASLVSGVI*IFDSLT
Trigger: TGTCAAGGAATCAAAGATGCAAATAACACCAGAAAC...TAATGAGGCTTCTACCCATGGTACACATTTGGTTGTGACTGCCATGTCTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR GCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACTTTGCAGTAACTTTCTaGCCCAACTGTATCCATAAT +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYFAVTF*PNCIHN
Trigger: ATTATGGATACAGTTGGGGCAGAAAGTTACTGCAAA...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATGTGCATCACTTTCTTTaGAGTAACTTTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNVHHFL*SNFLPQ
Trigger: TTGGGGCAGAAAGTTACTGCAAAGAAAGTGATGCAC...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACTATAACATACATATCTaGCCCAGTGTTACTTCACAG +
Preference number: 4 (lower is better)
Translates to: LYITYISAPVLLHRPMPYYNIHI*PSVTSQ
Trigger: CTGTGAAGTAACACTGGGGCAGATATGTATGTTATA...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CCA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTACGATGAATATCTTCTaGGTCTATTTCTACAGGATT +
Preference number: 4 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTTMNIF*VYFYRI
Trigger: AATCCTGTAGAAATAGACCCAGAAGATATTCATCGT...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390667.11
ENST00000613797.4
CDS-3UTR CCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTAGGCAAGTCAGGAGCTaGGAAAAGAAACCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCRQVRS*EKKPLH
Trigger: ATGGAGAGGTTTCTTTTCCCAGCTCCTGACTTGCCT...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTCCACCACTATACATCTaGAGTCTCATAGGAGACCAA +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCPPLYI*SLIGDQ
Trigger: TTGGTCTCCTATGAGACTTCAGATGTATAGTGGTGG...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp ACAGTGTTATTGTCTTTCTCCCTTTCAACATCCTGCAACAGTGCTAATTCTTTCGAGAGTTTTCAATACTaGAGGCAATGCCACTTACAA +
Preference number: 4 (lower is better)
Translates to: TVLLSFSLSTSCNSANSFESFQY*RQCHLQ
Trigger: TTGTAAGTGGCATTGCCTTCAGTATTGAAAACTCTC...GAAAGAATTAGCACTGTTGCAGGATGTTGAAAGGGAGAAAGACAATAACACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTGCTTTCAGCAAGAGGTaGCATGCACATATGAGAGTT +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCAFSKR*HAHMRV
Trigger: AACTCTCATATGTGCATGTCACCTCTTGCTGAAAGC...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCGTTTCTGGTGTTATTTaGATCTTTGATTCCTTGACA +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVVSGVI*IFDSLT
Trigger: TGTCAAGGAATCAAAGATGCAAATAACACCAGAAAC...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTGCCTCATTACTAAACTaGCGTAGGTGTATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCASLLN*RRCIPA
Trigger: TGCTGGAATACACCTACGGCAGTTTAGTAATGAGGC...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTCATTCTATGGACTGCTaGATTGAAAAGGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCHSMDC*IEKGLL
Trigger: CAGCAAGCCCTTTTCAATGCAGCAGTCCATAGAATG...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CCA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCAGACCAATTTTTAATTaGCGAGCAGCCATCTATATA +
Preference number: 4 (lower is better)
Translates to: HHVDPVHNDICEELLSLVRPIFN*RAAIYI
Trigger: TATATAGATGGCTGCTCGCCAATTAAAAATTGGTCT...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTAAAAGAGTCTACTTCTaGAAGGTTGAGATGCAGCCG +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCKRVYF*KVEMQP
Trigger: CGGCTGCATCTCAACCTTCCAGAAGTAGACTCTTTT...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTAGGTTTCCAGGAGATTaGTCTGCAAATTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCRFPGD*SANSSA
Trigger: AGCTGATGAATTTGCAGATCAATCTCCTGGAAACCT...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTTCCTCATCTTCACCTTaGGTCTCAAGAGTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCSSSSP*VSRVKG
Trigger: ACCTTTTACTCTTGAGACTCAAGGTGAAGATGAGGA...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTTCAGAAGCACTGGACTaGTTTTGTGTAACAGACATG +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCSEALD*FCVTDM
Trigger: CATGTCTGTTACACAAAATCAGTCCAGTGCTTCTGA...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTTTTTCCCCACAGAGGTaGACAGACCAAGAACTAAAA +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCFSPQR*TDQELK
Trigger: TTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAAAA...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTGTGCATCACTTTCTTTaGAGTAACTTTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCVHHFL*SNFLPQ
Trigger: TTGGGGCAGAAAGTTACTGCAAAGAAAGTGATGCAC...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTATCATGTTGATCCTGTaGACAACGATATATGCGAGG +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCIMLIL*TTIYAR
Trigger: CCTCGCATATATCGTTGTGCACAGGATCAACATGAT...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATCACCTCTGTGTTGTGTaGTCTTGCTTCATATTAAAT +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNHLCVV*SCFILN
Trigger: ATTTAATATGAAGCAAGACCACACAACACAGAGGTG...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
3UTR CAA 72 bp ATTAAATGCTTGAGATTTACTCTCAACTTCACATGTTaGTGCATCACTTTCTTTGCAGTAACTTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: IKCLRFTLNFTC*CITFFAVTFCP
Trigger: GGGGCAGAAAGTTACTGCAAAGAAAGTGATGCACAAACATGTGAAGTTGAGAGTAAATCTCAAGCATTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTGGAGTCTCTCCTATCTaGAATTCAATTGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCGVSPI*NSIGEK
Trigger: TTTCTCACCAATTGAATTTCAGATAGGAGAGACTCC...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTGAAGCATCAGGAGAATaGACAGTAAACTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCEASGE*TVNFLC
Trigger: ACAAAGGAAGTTTACTGTTCATTCTCCTGATGCTTC...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTAGAATTTGTTCCAGATaGAGCATCAGGAGAATGAAC +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCRICSR*SIRRMN
Trigger: GTTCATTCTCCTGATGCTTCATCTGGAACAAATTCT...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTATGTCAGTAAGCCCTTaGTTTTTCACATTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCMSVSP*FFTLRR
Trigger: CCTCCTTAATGTGAAAAATCAAGGGCTTACTGACAT...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATGTTTCTGGTGTTATTTaGATCTTTGATTCCTTGACA +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNVSGVI*IFDSLT
Trigger: TGTCAAGGAATCAAAGATGCAAATAACACCAGAAAC...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR GCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTTCCCTTTCAACATCCTaGAACAGTGCTAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCSLSTS*NSANSF
Trigger: GAAAGAATTAGCACTGTTGCAGGATGTTGAAAGGGA...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CCA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATACGATGAATATCTTCTaGGTCTATTTCTACAGGATT +
Preference number: 4 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNTMNIF*VYFYRI
Trigger: AATCCTGTAGAAATAGACCCAGAAGATATTCATCGT...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390667.11
ENST00000613797.4
CDS-3UTR TCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTTATAATTCAGCAACTTaGAGTTCCAGGAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCYNSAT*SSRSIS
Trigger: AGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATA...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR GCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTTTTGCAGTAACTTTCTaGCCCAACTGTATCCATAAT +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCFAVTF*PNCIHN
Trigger: ATTATGGATACAGTTGGGGCAGAAAGTTACTGCAAA...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTCACCTCTGTGTTGTGTaGTCTTGCTTCATATTAAAT +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCHLCVV*SCFILN
Trigger: ATTTAATATGAAGCAAGACCACACAACACAGAGGTG...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CCA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTACGATGAATATCTTCTaGGTCTATTTCTACAGGATT +
Preference number: 4 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCTMNIF*VYFYRI
Trigger: AATCCTGTAGAAATAGACCCAGAAGATATTCATCGT...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
CDS TCA 90 bp TCCCCGCTTCCGCGCTGTCTTGGGCCAACCAGGGCACGGGGCTTGTaGGCGACTAGCCAATCGTGTCGTCCCGCCATCCGCGAACCAGCC +
Preference number: 5 (lower is better)
Translates to: SPLPRCLGPTRARGL*ATSQSCRPAIREPA
Trigger: GGCTGGTTCGCGGATGGCGGGACGACACGATTGGCTAGTCGCTCACAAGCCCCGTGCCCTGGTTGGCCCAAGACAGCGCGGAAGCGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618209.5
ENST00000652266.1
CDS TCA 90 bp ACGTGGCCACTCTTTCTGGTGCCCCTCTCTTCCACACCTACTCCCTaGCTGCTCCCATTCACCAGGGGCGAGCGGGCAGGCAAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: TWPLFLVPLSSTPTP*LLPFTRGERAGKSG
Trigger: TCCTGACTTGCCTGCCCGCTCGCCCCTGGTGAATGGGAGCAGTCAGGGAGTAGGTGTGGAAGAGAGGGGCACCAGAAAGAGTGGCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS CCA 90 bp TCCGCGAACCAGCCAATCGCACGGAGGCCGCGTAGGAAATTCGAATaGCAACTCCTCGCTCCACGTTCCGCGCAGAGGAACGTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: SANQPIARRPRRKFE*QLLAPRSAQRNVAP
Trigger: TGGAGCCACGTTCCTCTGCGCGGAACGTGGAGCGAGGAGTTGCCATTCGAATTTCCTACGCGGCCTCCGTGCGATTGGCTGGTTCGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618209.5
ENST00000652266.1
CDS GCA 90 bp CAGACAGGAGGAAAGGCCAGGGACCACAAAGAGCGTACCTACCGGTaGGTACAAAACGAAGCCCCCAGTACCGACTCCAGGGAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: QTGGKARDHKERTYR*VQNEAPSTDSRELR
Trigger: CCGGAGCTCCCTGGAGTCGGTACTGGGGGCTTCGTTTTGTACGCACCGGTAGGTACGCTCTTTGTGGTCCCTGGCCTTTCCTCCTGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS CCA 90 bp AGTGCGAAGGAGGCGTCGCCCCCAACCCTACGTGGCCACTCTTTCTaGTGCCCCTCTCTTCCACACCTACTCCCTGACTGCTCCCATTCA +
Preference number: 5 (lower is better)
Translates to: SAKEASPPTLRGHSF*CPSLPHLLPDCSHS
Trigger: TGAATGGGAGCAGTCAGGGAGTAGGTGTGGAAGAGAGGGGCACCAGAAAGAGTGGCCACGTAGGGTTGGGGGCGACGCCTCCTTCGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS GCA 90 bp TCTACTTCTGGAAGGTTGAGATGCAGCCGGCTTCCCTGGATGGAGTaGGAAGGAGGCGTCGCCCCCAACCCTACGTGGCCACTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: STSGRLRCSRLPWME*EGGVAPNPTWPLFL
Trigger: CAGAAAGAGTGGCCACGTAGGGTTGGGGGCGACGCCTCCTTCGCACTCCATCCAGGGAAGCCGGCTGCATCTCAACCTTCCAGAAGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS CCA 90 bp GGAAAAGAGTCTACTTCTGGAAGGTTGAGATGCAGCCGGCTTCCCTaGATGGAGTGCGAAGGAGGCGTCGCCCCCAACCCTACGTGGCCA +
Preference number: 5 (lower is better)
Translates to: GKESTSGRLRCSRLP*MECEGGVAPNPTWP
Trigger: TGGCCACGTAGGGTTGGGGGCGACGCCTCCTTCGCACTCCATCCAGGGAAGCCGGCTGCATCTCAACCTTCCAGAAGTAGACTCTTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS CCA 90 bp ACTGCTCCCATTCACCAGGGGCGAGCGGGCAGGCAAGTCAGGAGCTaGGAAAAGAAACCTCTCCATTCAGACAGGAGGAAAGGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: TAPIHQGRAGRQVRS*EKKPLHSDRRKGQG
Trigger: TCCCTGGCCTTTCCTCCTGTCTGAATGGAGAGGTTTCTTTTCCCAGCTCCTGACTTGCCTGCCCGCTCGCCCCTGGTGAATGGGAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR CAA 90 bp AGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGAATGGTCAGCTTCGCTTCCGCGCTGTCTaGGGCCAACCAGGGCACGGG +
Preference number: 5 (lower is better)
Translates to: RQQCLTSSIAFLRMNGQLRFRAV*GQPGHG
Trigger: CCCGTGCCCTGGTTGGCCCAAGACAGCGCGGAAGCG...AAGCTGACCATTCATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618209.5
CDS-3UTR CAA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTACATCCCTACCCACGTTaGAGCTGGAAAGGATGTCCC +
Preference number: 5 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVHPYPR*SWKGCP
Trigger: GGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp CATCCCTACCCACGTTTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATGCATCTTTGATTCCTaGACATCTCCCATAGCACAG +
Preference number: 5 (lower is better)
Translates to: HPYPRLSWKGCPYPRHEVCIFDS*TSPIAQ
Trigger: CTGTGCTATGGGAGATGTCAAGGAATCAAAGATGCA...TACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTCGCTTCCGCGCTGTCTaGGGCCAACCAGGGCACGGG +
Preference number: 5 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCRFRAV*GQPGHG
Trigger: CCCGTGCCCTGGTTGGCCCAAGACAGCGCGGAAGCG...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652266.1
CDS-3UTR CAA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAATCTACTTCTGGAAGGTaGAGATGCAGCCGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: YNIHICPSVTSQAYALRESTSGR*RCSRLP
Trigger: GGGAAGCCGGCTGCATCTCAACCTTCCAGAAGTAGA...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613797.4
CDS-3UTR CAA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTCATCCCTACCCACGTTaGAGCTGGAAAGGATGTCCC +
Preference number: 5 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTHPYPR*SWKGCP
Trigger: GGGACATCCTTTCCAGCTCAAACGTGGGTAGGGATG...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCTCTACTTCTGGAAGGTaGAGATGCAGCCGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: HHVDPVHNDICEELLSLVSTSGR*RCSRLP
Trigger: GGGAAGCCGGCTGCATCTCAACCTTCCAGAAGTAGA...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS-3UTR CAA 90 bp TTGAGCTGGAAAGGATGTCCCTACCCTAGGCATGAGGTATATTTTATTCTGGGCGAGGTTTCCAGGAGATaGATCTGCAAATTCATCAGC +
Preference number: 5 (lower is better)
Translates to: LSWKGCPYPRHEVYFILGEVSRR*ICKFIS
Trigger: GCTGATGAATTTGCAGATCAATCTCCTGGAAACCTC...GCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACATCCTTTCCAGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp ATCCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGGAGGTTTCCAGGAGATaGATCTGCAAATTCATCAGC +
Preference number: 5 (lower is better)
Translates to: IHRKRQQCLTSSIAFLRMEVSRR*ICKFIS
Trigger: GCTGATGAATTTGCAGATCAATCTCCTGGAAACCTC...CATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR CAA 90 bp ATCCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGAATGTGCATTGAAAAGGGCTaGCTGTTTTCATCCAACACC +
Preference number: 5 (lower is better)
Translates to: IHRKRQQCLTSSIAFLRMCIEKG*LFSSNT
Trigger: GGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGCA...CATTCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR CAA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAATGCATTGAAAAGGGCTaGCTGTTTTCATCCAACACC +
Preference number: 5 (lower is better)
Translates to: YNIHICPSVTSQAYALRECIEKG*LFSSNT
Trigger: GGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGCA...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTTGCATCTTTGATTCCTaGACATCTCCCATAGCACAG +
Preference number: 5 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTCIFDS*TSPIAQ
Trigger: CTGTGCTATGGGAGATGTCAAGGAATCAAAGATGCA...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp AAAATCCACAGGAAGAGACAGCAATGTCTGACAAGCAGCATCGCTTTTCTCAGATGCATCTTTGATTCCTaGACATCTCCCATAGCACAG +
Preference number: 5 (lower is better)
Translates to: KIHRKRQQCLTSSIAFLRCIFDS*TSPIAQ
Trigger: CTGTGCTATGGGAGATGTCAAGGAATCAAAGATGCA...TCTGAGAAAAGCGATGCTGCTTGTCAGACATTGCTGTCTCTTCCTGTGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618209.5
ENST00000651376.1
CDS-3UTR CAA 90 bp CAATGCCACTTACAAAATCAGTCATGGGTAAACTGCCATTATCAACCGGCTCCTTGCATCTTTGATTCCTaGACATCTCCCATAGCACAG +
Preference number: 5 (lower is better)
Translates to: QCHLQNQSWVNCHYQPAPCIFDS*TSPIAQ
Trigger: CTGTGCTATGGGAGATGTCAAGGAATCAAAGATGCA...AGGAGCCGGTTGATAATGGCAGTTTACCCATGACTGATTTTGTAAGTGGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR CAA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAATTCCTCATCTTCACCTaGAGTCTCAAGAGTAAAAGG +
Preference number: 5 (lower is better)
Translates to: YNIHICPSVTSQAYALREFLIFT*SLKSKR
Trigger: CCTTTTACTCTTGAGACTCAAGGTGAAGATGAGGAA...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTAGCACTGGACTGATTTaGTGTAACAGACATGGCAGT +
Preference number: 5 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTSTGLI*CNRHGS
Trigger: ACTGCCATGTCTGTTACACAAAATCAGTCCAGTGCT...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTTGCATTGAAAAGGGCTaGCTGTTTTCATCCAACACC +
Preference number: 5 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTCIEKG*LFSSNT
Trigger: GGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGCA...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCCCAGTCACCATCATGTaGATCCTGTGCACAACGATA +
Preference number: 5 (lower is better)
Translates to: HHVDPVHNDICEELLSLVPVTIM*ILCTTI
Trigger: TATCGTTGTGCACAGGATCAACATGATGGTGACTGG...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS CCA 90 bp GAGGAACTCTTAAGCTTAGTCTTTGATTCTGACAGAGGCATTCTATaGACTGCTGCATTGAAAAGGGCTTGCTGTTTTCATCCAACACCT +
Preference number: 5 (lower is better)
Translates to: EELLSLVFDSDRGIL*TAALKRACCFHPTP
Trigger: AGGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGCAGCAGTCCATAGAATGCCTCTGTCAGAATCAAAGACTAAGCTTAAGAGTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CAA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGAGGTTTCCAGGAGATaGATCTGCAAATTCATCAGC +
Preference number: 5 (lower is better)
Translates to: LYITYISAPVLLHRPMPYEVSRR*ICKFIS
Trigger: GCTGATGAATTTGCAGATCAATCTCCTGGAAACCTC...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCTGCATCTTTGATTCCTaGACATCTCCCATAGCACAG +
Preference number: 5 (lower is better)
Translates to: HHVDPVHNDICEELLSLVCIFDS*TSPIAQ
Trigger: CTGTGCTATGGGAGATGTCAAGGAATCAAAGATGCA...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CAA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACAGCACTGGACTGATTTaGTGTAACAGACATGGCAGT +
Preference number: 5 (lower is better)
Translates to: LYITYISAPVLLHRPMPYSTGLI*CNRHGS
Trigger: ACTGCCATGTCTGTTACACAAAATCAGTCCAGTGCT...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAACTGTGTTGTGTGGTCTaGCTTCATATTAAATGCTTG +
Preference number: 5 (lower is better)
Translates to: YNIHICPSVTSQAYALRELCCVV*LHIKCL
Trigger: CAAGCATTTAATATGAAGCAAGACCACACAACACAG...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACCTATGGACTGCTGCATaGAAAAGGGCTTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: LYITYISAPVLLHRPMPYLWTAA*KRACCF
Trigger: AAAACAGCAAGCCCTTTTCAATGCAGCAGTCCATAG...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCCTATGGACTGCTGCATaGAAAAGGGCTTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: HHVDPVHNDICEELLSLVLWTAA*KRACCF
Trigger: AAAACAGCAAGCCCTTTTCAATGCAGCAGTCCATAG...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CAA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCTTCCTCATCTTCACCTaGAGTCTCAAGAGTAAAAGG +
Preference number: 5 (lower is better)
Translates to: HHVDPVHNDICEELLSLVFLIFT*SLKSKR
Trigger: CCTTTTACTCTTGAGACTCAAGGTGAAGATGAGGAA...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CAA 90 bp ACTGAGGTTTCCAGGAGATTGATCTGCAAATTCATCAGCTCTAAAATAGTCACCAGCACTGGACTGATTTaGTGTAACAGACATGGCAGT +
Preference number: 5 (lower is better)
Translates to: TEVSRRLICKFISSKIVTSTGLI*CNRHGS
Trigger: ACTGCCATGTCTGTTACACAAAATCAGTCCAGTGCT...GGTGACTATTTTAGAGCTGATGAATTTGCAGATCAATCTCCTGGAAACCTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR CAA 90 bp TATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACGGGAAACTGTATCCATAATATaGCTTCCACAATTCTGCGTA +
Preference number: 5 (lower is better)
Translates to: YNIHICPSVTSQAYALRETVSII*LPQFCV
Trigger: TACGCAGAATTGTGGAAGCAATATTATGGATACAGT...TTCCCGTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp CTGCCATTATCAACCGGCTCCTTAATCCAAGTGGTCTCATCTGCTATCTCTATACTCAACTTCACATGTTaGTGCATCACTTTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: LPLSTGSLIQVVSSAISILNFTC*CITFFA
Trigger: TGCAAAGAAAGTGATGCACAAACATGTGAAGTTGAG...TATAGAGATAGCAGATGAGACCACTTGGATTAAGGAGCCGGTTGATAATGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR CAA 90 bp TTCTGGGCACCACACATTTGCCCCATAGATAACAATACACGTGATGATGTCACTCTGTGTTGTGTGGTCTaGCTTCATATTAAATGCTTG +
Preference number: 5 (lower is better)
Translates to: FWAPHICPIDNNTRDDVTLCCVV*LHIKCL
Trigger: CAAGCATTTAATATGAAGCAAGACCACACAACACAG...AGTGACATCATCACGTGTATTGTTATCTATGGGGCAAATGTGTGGTGCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp GTAACAGACATGGCAGTCACAACCAAATGTGTACCATGGGTAGAAGCCTCATTACTGTGTTGTGTGGTCTaGCTTCATATTAAATGCTTG +
Preference number: 5 (lower is better)
Translates to: VTDMAVTTKCVPWVEASLLCCVV*LHIKCL
Trigger: CAAGCATTTAATATGAAGCAAGACCACACAACACAG...TAATGAGGCTTCTACCCATGGTACACATTTGGTTGTGACTGCCATGTCTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR CAA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATGAGGTTTCCAGGAGATaGATCTGCAAATTCATCAGC +
Preference number: 5 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNEVSRR*ICKFIS
Trigger: GCTGATGAATTTGCAGATCAATCTCCTGGAAACCTC...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATAGCACTGGACTGATTTaGTGTAACAGACATGGCAGT +
Preference number: 5 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNSTGLI*CNRHGS
Trigger: ACTGCCATGTCTGTTACACAAAATCAGTCCAGTGCT...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp CATCATGTTGATCCTGTGCACAACGATATATGCGAGGAACTCTTAAGCTTAGTCCTCAACTTCACATGTTaGTGCATCACTTTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: HHVDPVHNDICEELLSLVLNFTC*CITFFA
Trigger: TGCAAAGAAAGTGATGCACAAACATGTGAAGTTGAG...GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CAA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACCTCAACTTCACATGTTaGTGCATCACTTTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: LYITYISAPVLLHRPMPYLNFTC*CITFFA
Trigger: TGCAAAGAAAGTGATGCACAAACATGTGAAGTTGAG...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATTGCATTGAAAAGGGCTaGCTGTTTTCATCCAACACC +
Preference number: 5 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNCIEKG*LFSSNT
Trigger: GGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGCA...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATCTATGGACTGCTGCATaGAAAAGGGCTTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNLWTAA*KRACCF
Trigger: AAAACAGCAAGCCCTTTTCAATGCAGCAGTCCATAG...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATTTCCTCATCTTCACCTaGAGTCTCAAGAGTAAAAGG +
Preference number: 5 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNFLIFT*SLKSKR
Trigger: CCTTTTACTCTTGAGACTCAAGGTGAAGATGAGGAA...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp ACAGTGTTATTGTCTTTCTCCCTTTCAACATCCTGCAACAGTGCTAATTCTTTCTTCCTCATCTTCACCTaGAGTCTCAAGAGTAAAAGG +
Preference number: 5 (lower is better)
Translates to: TVLLSFSLSTSCNSANSFFLIFT*SLKSKR
Trigger: CCTTTTACTCTTGAGACTCAAGGTGAAGATGAGGAA...GAAAGAATTAGCACTGTTGCAGGATGTTGAAAGGGAGAAAGACAATAACACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR CAA 90 bp TTGTATATAACATACATATCTGCCCCAGTGTTACTTCACAGGCCTATGCCCTACACTGTATCCATAATATaGCTTCCACAATTCTGCGTA +
Preference number: 5 (lower is better)
Translates to: LYITYISAPVLLHRPMPYTVSII*LPQFCV
Trigger: TACGCAGAATTGTGGAAGCAATATTATGGATACAGT...GTAGGGCATAGGCCTGTGAAGTAACACTGGGGCAGATATGTATGTTATATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp CTCTTTATCTTCCTCATCTTCACCTTGAGTCTCAAGAGTAAAAGGTATCTGAATCTATGGACTGCTGCATaGAAAAGGGCTTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: LFIFLIFTLSLKSKRYLNLWTAA*KRACCF
Trigger: AAAACAGCAAGCCCTTTTCAATGCAGCAGTCCATAG...ATTCAGATACCTTTTACTCTTGAGACTCAAGGTGAAGATGAGGAAGATAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR CAA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTGAGGTTTCCAGGAGATaGATCTGCAAATTCATCAGC +
Preference number: 5 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCEVSRR*ICKFIS
Trigger: GCTGATGAATTTGCAGATCAATCTCCTGGAAACCTC...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CAA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTTGCATCTTTGATTCCTaGACATCTCCCATAGCACAG +
Preference number: 5 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCCIFDS*TSPIAQ
Trigger: CTGTGCTATGGGAGATGTCAAGGAATCAAAGATGCA...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CAA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTAGCACTGGACTGATTTaGTGTAACAGACATGGCAGT +
Preference number: 5 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCSTGLI*CNRHGS
Trigger: ACTGCCATGTCTGTTACACAAAATCAGTCCAGTGCT...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CAA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTTGCATTGAAAAGGGCTaGCTGTTTTCATCCAACACC +
Preference number: 5 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCCIEKG*LFSSNT
Trigger: GGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGCA...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CAA 90 bp TTCCCCACAGAGGTGAACAGACCAAGAACTAAAATTTCAGGAAACCTGTTTAATACTGTATCCATAATATaGCTTCCACAATTCTGCGTA +
Preference number: 5 (lower is better)
Translates to: FPTEVNRPRTKISGNLFNTVSII*LPQFCV
Trigger: TACGCAGAATTGTGGAAGCAATATTATGGATACAGT...ATTAAACAGGTTTCCTGAAATTTTAGTTCTTGGTCTGTTCACCTCTGTGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000652266.1
CDS-3UTR CAA 90 bp CTCTTTATCTTCCTCATCTTCACCTTGAGTCTCAAGAGTAAAAGGTATCTGAATACTGTATCCATAATATaGCTTCCACAATTCTGCGTA +
Preference number: 5 (lower is better)
Translates to: LFIFLIFTLSLKSKRYLNTVSII*LPQFCV
Trigger: TACGCAGAATTGTGGAAGCAATATTATGGATACAGT...ATTCAGATACCTTTTACTCTTGAGACTCAAGGTGAAGATGAGGAAGATAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651376.1
CDS-3UTR CAA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTCTCAACTTCACATGTTaGTGCATCACTTTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCLNFTC*CITFFA
Trigger: TGCAAAGAAAGTGATGCACAAACATGTGAAGTTGAG...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CAA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTCTGTGTTGTGTGGTCTaGCTTCATATTAAATGCTTG +
Preference number: 5 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCLCCVV*LHIKCL
Trigger: CAAGCATTTAATATGAAGCAAGACCACACAACACAG...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS-3UTR CAA 90 bp AAACTTATAATTCAGCAACTTGAAGTTCCAGGAGCATTTCTGTTGTTCCTATGTACTGTATCCATAATATaGCTTCCACAATTCTGCGTA +
Preference number: 5 (lower is better)
Translates to: KLIIQQLEVPGAFLLFLCTVSII*LPQFCV
Trigger: TACGCAGAATTGTGGAAGCAATATTATGGATACAGT...ACATAGGAACAACAGAAATGCTCCTGGAACTTCAAGTTGCTGAATTATAAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS TCA 72 bp CCGCGCTGTCTTGGGCCAACCAGGGCACGGGGCTTGTaGGCGACTAGCCAATCGTGTCGTCCCGCCATCCGC +
Preference number: 6 (lower is better)
Translates to: PRCLGPTRARGL*ATSQSCRPAIR
Trigger: GCGGATGGCGGGACGACACGATTGGCTAGTCGCTCACAAGCCCCGTGCCCTGGTTGGCCCAAGACAGCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618209.5
ENST00000652266.1
CDS GCA 72 bp GGAAGGTTGAGATGCAGCCGGCTTCCCTGGATGGAGTaGGAAGGAGGCGTCGCCCCCAACCCTACGTGGCCA +
Preference number: 6 (lower is better)
Translates to: GRLRCSRLPWME*EGGVAPNPTWP
Trigger: TGGCCACGTAGGGTTGGGGGCGACGCCTCCTTCGCACTCCATCCAGGGAAGCCGGCTGCATCTCAACCTTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS CCA 72 bp ATGGAGTGCGAAGGAGGCGTCGCCCCCAACCCTACGTaGCCACTCTTTCTGGTGCCCCTCTCTTCCACACCT +
Preference number: 6 (lower is better)
Translates to: MECEGGVAPNPT*PLFLVPLSSTP
Trigger: AGGTGTGGAAGAGAGGGGCACCAGAAAGAGTGGCCACGTAGGGTTGGGGGCGACGCCTCCTTCGCACTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS CCA 72 bp CAGCCAATCGCACGGAGGCCGCGTAGGAAATTCGAATaGCAACTCCTCGCTCCACGTTCCGCGCAGAGGAAC +
Preference number: 6 (lower is better)
Translates to: QPIARRPRRKFE*QLLAPRSAQRN
Trigger: GTTCCTCTGCGCGGAACGTGGAGCGAGGAGTTGCCATTCGAATTTCCTACGCGGCCTCCGTGCGATTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618209.5
ENST00000652266.1
CDS CCA 72 bp TCTACTTCTGGAAGGTTGAGATGCAGCCGGCTTCCCTaGATGGAGTGCGAAGGAGGCGTCGCCCCCAACCCT +
Preference number: 6 (lower is better)
Translates to: STSGRLRCSRLP*MECEGGVAPNP
Trigger: AGGGTTGGGGGCGACGCCTCCTTCGCACTCCATCCAGGGAAGCCGGCTGCATCTCAACCTTCCAGAAGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS CAA 72 bp GGCATAGACTCTTTAACTCCCCGCTTCCGCGCTGTCTaGGGCCAACCAGGGCACGGGGCTTGTGAGCGACTA +
Preference number: 6 (lower is better)
Translates to: GIDSLTPRFRAV*GQPGHGACERL
Trigger: TAGTCGCTCACAAGCCCCGTGCCCTGGTTGGCCCAAGACAGCGCGGAAGCGGGGAGTTAAAGAGTCTATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618209.5
ENST00000652266.1
CDS CAA 90 bp TCCACGACAGGCATAGACTCTTTAACTCCCCGCTTCCGCGCTGTCTaGGGCCAACCAGGGCACGGGGCTTGTGAGCGACTAGCCAATCGT +
Preference number: 6 (lower is better)
Translates to: STTGIDSLTPRFRAV*GQPGHGACERLANR
Trigger: ACGATTGGCTAGTCGCTCACAAGCCCCGTGCCCTGGTTGGCCCAAGACAGCGCGGAAGCGGGGAGTTAAAGAGTCTATGCCTGTCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618209.5
ENST00000652266.1
CDS GCA 72 bp TGGGGTGGAAAAGAGTCTACTTCTGGAAGGTTGAGATaGAGCCGGCTTCCCTGGATGGAGTGCGAAGGAGGC +
Preference number: 6 (lower is better)
Translates to: WGGKESTSGRLR*SRLPWMECEGG
Trigger: GCCTCCTTCGCACTCCATCCAGGGAAGCCGGCTGCATCTCAACCTTCCAGAAGTAGACTCTTTTCCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613797.4
ENST00000651477.1
CDS GCA 72 bp AGAGGCATTCTATGGACTGCTGCATTGAAAAGGGCTTaGTGTTTTCATCCAACACCTCTGTGTTGTGTGGTC +
Preference number: 6 (lower is better)
Translates to: RGILWTAALKRA*CFHPTPLCCVV
Trigger: GACCACACAACACAGAGGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGCAGCAGTCCATAGAATGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS CAA 72 bp CAGAGGCATTCTATGGACTGCTGCATTGAAAAGGGCTaGCTGTTTTCATCCAACACCTCTGTGTTGTGTGGT +
Preference number: 6 (lower is better)
Translates to: QRHSMDCCIEKG*LFSSNTSVLCG
Trigger: ACCACACAACACAGAGGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGCAGCAGTCCATAGAATGCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS CAA 90 bp AGCTTAGTCTTTGATTCTGACAGAGGCATTCTATGGACTGCTGCATaGAAAAGGGCTTGCTGTTTTCATCCAACACCTCTGTGTTGTGTG +
Preference number: 6 (lower is better)
Translates to: SLVFDSDRGILWTAA*KRACCFHPTPLCCV
Trigger: CACACAACACAGAGGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGCAGCAGTCCATAGAATGCCTCTGTCAGAATCAAAGACTAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS TCA 72 bp TTGATTCTGACAGAGGCATTCTATGGACTGCTGCATTaGAAAGGGCTTGCTGTTTTCATCCAACACCTCTGT +
Preference number: 6 (lower is better)
Translates to: LILTEAFYGLLH*KGLAVFIQHLC
Trigger: ACAGAGGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGCAGCAGTCCATAGAATGCCTCTGTCAGAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS CAA 72 bp TTTGATTCTGACAGAGGCATTCTATGGACTGCTGCATaGAAAAGGGCTTGCTGTTTTCATCCAACACCTCTG +
Preference number: 6 (lower is better)
Translates to: FDSDRGILWTAA*KRACCFHPTPL
Trigger: CAGAGGTGTTGGATGAAAACAGCAAGCCCTTTTCAATGCAGCAGTCCATAGAATGCCTCTGTCAGAATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS CCA 72 bp TTAAGCTTAGTCTTTGATTCTGACAGAGGCATTCTATaGACTGCTGCATTGAAAAGGGCTTGCTGTTTTCAT +
Preference number: 6 (lower is better)
Translates to: LSLVFDSDRGIL*TAALKRACCFH
Trigger: ATGAAAACAGCAAGCCCTTTTCAATGCAGCAGTCCATAGAATGCCTCTGTCAGAATCAAAGACTAAGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000613797.4
ENST00000651477.1
ENST00000652266.1
CDS TCA 72 bp TCTGGGTCTATTTCTACAGGATTTATTACAGCTAGTTaGTCAATAGACCATCTAAATTTCCCTGGAGTCGGT +
Preference number: 6 (lower is better)
Translates to: SGSISTGFITAS*SIDHLNFPGVG
Trigger: ACCGACTCCAGGGAAATTTAGATGGTCTATTGATCAACTAGCTGTAATAAATCCTGTAGAAATAGACCCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377814.6
CDS TCA 72 bp TCTGGGTCTATTTCTACAGGATTTATTACAGCTAGTTaGTCAATAGACCATCTAAATTTCCCTGGAGTTGGT +
Preference number: 6 (lower is better)
Translates to: SGSISTGFITAS*SIDHLNFPGVG
Trigger: ACCAACTCCAGGGAAATTTAGATGGTCTATTGATCAACTAGCTGTAATAAATCCTGTAGAAATAGACCCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000390667.11
ENST00000464754.1
ENST00000613797.4
ENST00000651477.1