RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BOP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000261236

Ensembl transcript IDs: ENST00000563210.1, ENST00000568812.1, ENST00000569160.1, ENST00000569403.1, ENST00000569669.6, ENST00000569712.1, ENST00000642409.2, ENST00000644494.1, ENST00000645213.1, ENST00000647182.1, ENST00000647369.1, ENST00000647429.1

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 72 bp GGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTaGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTT +
Preference number: 3 (lower is better)
Translates to: GGGFVGNPNSRR*EHQAAQGKGSV
Trigger: AACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCGCCCGAGCACGGCGTTaGGGTCCTCCTGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSARARR*GPPGPT
Trigger: TGTGGGCCCAGGAGGACCCCAACGCCGTGCTCGGGC...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp GGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACGCACCTGTCCGTGGCTaGGGCGGAACGGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: GAALLATPIQEGGSTRQHAPVRG*GGTDSG
Trigger: GCCAGAGTCCGTTCCGCCGCAGCCACGGACAGGTGC...GTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCAACCTGGGTGTGGCCTTaGGTGGCCAGCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: GGGFVGNPNSRRWEHQAATWVWP*VASTTA
Trigger: GGCCGTGGTGCTGGCCACCCAAGGCCACACCCAGGT...TGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCAAGGGCCGGGCAGGGTaGAAGGCCACTCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSKGRAG*KATRCT
Trigger: GGTGCAGCGAGTGGCCTTCCACCCTGCCCGGCCCTT...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCCATAGAAGCTGGGGGTaGGGTCTCGGGGCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSHRSWG*GLGAGE
Trigger: CTCGCCGGCCCCGAGACCCCACCCCCAGCTTCTATG...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACACGACTCGGCGTGGCCTaGCAGGGCCAGCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GRLCWQPQFKKVGAPGSTRLGVA*QGQLGS
Trigger: GCTCCCAAGCTGGCCCTGCCAGGCCACGCCGAGTCG...TGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGCGACTCGGCGTGGCCTaGCAGGGCCAGCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RLCWQPQFKKVGAPGSTGRLGVA*QGQLGS
Trigger: GCTCCCAAGCTGGCCCTGCCAGGCCACGCCGAGTCG...CCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp GTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGGGAACGGACTCTGGCTaGGGCGACGGCTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VGAALLATPIQEGGSTRQGTDSG*GDGSAG
Trigger: ACCAGCTGAGCCGTCGCCGCAGCCAGAGTCCGTTCC...CTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCGGTAGAGGCGGACGCTaGGCTGGGACGCCACCAACA +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSGRGGR*AGTPPT
Trigger: TGTTGGTGGCGTCCCAGCGCAGCGTCCGCCTCTACC...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp GCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGCACGTGGGGAAGGGCTaGAGGTCCCTCGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: ATPIQEGGSTRQHRVKALHVGKG*RSLGRG
Trigger: GCCTCGGCCGAGGGACCTGCAGCCCTTCCCCACGTG...CAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp GGTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCGGACAGTCCCGTCTaGCCCCGAGGAGAAGACCCA +
Preference number: 4 (lower is better)
Translates to: GGGGFVGNPNSRRWEHQAADSPV*PRGEDP
Trigger: TGGGTCTTCTCCTCGGGGGCAGACGGGACTGTCCGC...TGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCCCGGTCCCCCAGAGCTaGGTTCAGCAGCAGCACCGA +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSPVPQS*VQQQHR
Trigger: TCGGTGCTGCTGCTGAACCCAGCTCTGGGGGACCGG...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGAGCCGCAGGCCCACTTaGCGCTCCTCCTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: RLCWQPQFKKVGAPGSTGSRRPT*RSSSEA
Trigger: GGCCTCAGAGGAGGAGCGCCAAGTGGGCCTGCGGCT...CCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTCGGCGGAACGGACTCTaGCTGCGGCGACGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GFVGNPNSRRWEHQAAQGRRNGL*LRRRLS
Trigger: GCTGAGCCGTCGCCGCAGCCAGAGTCCGTTCCGCCG...ACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCAAGGGCCGGGCAGGGTaGAAGGCCACTCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: WEHQAAQGKGSVDFSTTTKGRAG*KATRCT
Trigger: GGTGCAGCGAGTGGCCTTCCACCCTGCCCGGCCCTT...GGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGCGGACGCTGCGCTaGGACGCCACCAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: GAALLATPIQEGGSTRQHRRTLR*DATNRK
Trigger: CTTCCTGTTGGTGGCGTCCCAGCGCAGCGTCCGCCT...GTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACGGGGCCGGCGAGGCTaGATCCAGCCCATCTTGATG +
Preference number: 4 (lower is better)
Translates to: GGGFVGNPNSRRWEHQAARGRRG*IQPILM
Trigger: CATCAAGATGGGCTGGATCCAGCCTCGCCGGCCCCG...TGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCCCACATAGAAGCTGGGGGTaGGGTCTCGGGGCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: EHQAAQGKGSVDFSTTTPHRSWG*GLGAGE
Trigger: CTCGCCGGCCCCGAGACCCCACCCCCAGCTTCTATG...TGGGGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp AGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGGCCCGAGCACGGCGTTaGGGTCCTCCTGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: RRWEHQAAQGKGSVDFSTARARR*GPPGPT
Trigger: TGTGGGCCCAGGAGGACCCCAACGCCGTGCTCGGGC...CGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp TGGTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAAGGCGCTCAACAGCTaGTCTGTGCTGCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: WWGRLCWQPQFKKVGAPGKALNS*SVLPAT
Trigger: GGTGGCGGGCAGCACAGATCAGCTGTTGAGCGCCTT...GCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCAAGGCGCTCAACAGCTaGTCTGTGCTGCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSKALNS*SVLPAT
Trigger: GGTGGCGGGCAGCACAGATCAGCTGTTGAGCGCCTT...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp GGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACGACGGCTCAGCTGGTaGATCAGCACCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GGGFVGNPNSRRWEHQAARRLSW*ISTWVW
Trigger: CCACACCCAGGTGCTGATTCACCAGCTGAGCCGTCG...TGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCTGGAAGGCCACTCGCTaGACCTGTCCGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: WEHQAAQGKGSVDFSTTTWKATR*TCPWLR
Trigger: CCGCAGCCACGGACAGGTGCAGCGAGTGGCCTTCCA...GGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TGGTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCCGCACCAGGGCCACCTaGTCATCCGTCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: WWGRLCWQPQFKKVGAPGRTRAT*SSVSLR
Trigger: CCTGAGACTGACGGATGAGCAGGTGGCCCTGGTGCG...GCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCTCCTCGGGCAAGGAGTaGTGGCCTGCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSSSGKE*WPAPAP
Trigger: AGGAGCAGGTGCAGGCCAGCACTCCTTGCCCGAGGA...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp GGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACTCCTCGGGCAAGGAGTaGTGGCCTGCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GAALLATPIQEGGSTRQHSSGKE*WPAPAP
Trigger: AGGAGCAGGTGCAGGCCAGCACTCCTTGCCCGAGGA...GTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCCTCTCGCCTGGCTCCTaGTGTTCCCACGCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: WEHQAAQGKGSVDFSTTTLSPGS*CSHAKR
Trigger: GCGCTTGGCGTGGGAACAGCAGGAGCCAGGCGAGAG...GGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCCCGTGCCAGGTCACCTaGGTCACTGGCTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: WEHQAAQGKGSVDFSTTTPCQVT*VTGFPW
Trigger: CCACGGGAAGCCAGTGACGCAGGTGACCTGGCACGG...GGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp CGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGCCGTGCCAGGTCACCTaGGTCACTGGCTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: RLCWQPQFKKVGAPGSTGPCQVT*VTGFPW
Trigger: CCACGGGAAGCCAGTGACGCAGGTGACCTGGCACGG...CCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGGGCAGACAGCGGGGCTaGGGTTCCAGGCCACACTCT +
Preference number: 4 (lower is better)
Translates to: RLCWQPQFKKVGAPGSTGGRQRG*GSRPHS
Trigger: AGAGTGTGGCCTGGAACCCCAGCCCCGCTGTCTGCC...CCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp AGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGCGCTGCACCTGTCCGTaGCTGCGGCGGAACGGACTC +
Preference number: 4 (lower is better)
Translates to: RRWEHQAAQGKGSVDFSTRCTCP*LRRNGL
Trigger: GAGTCCGTTCCGCCGCAGCCACGGACAGGTGCAGCG...CGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACACGGGGCCGGCGAGGCTaGATCCAGCCCATCTTGATG +
Preference number: 4 (lower is better)
Translates to: GRLCWQPQFKKVGAPGSTRGRRG*IQPILM
Trigger: CATCAAGATGGGCTGGATCCAGCCTCGCCGGCCCCG...TGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGTCGGGCAAGGAGTGCTaGCCTGCACCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VGAALLATPIQEGGSTRQSGKEC*PAPAPQ
Trigger: CTGAGGAGCAGGTGCAGGCCAGCACTCCTTGCCCGA...CTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCTCGGGCAAGGAGTGCTaGCCTGCACCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSSGKEC*PAPAPQ
Trigger: CTGAGGAGCAGGTGCAGGCCAGCACTCCTTGCCCGA...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCGGTACGTGCATCTTGTaGCGCCCGAGCACGGCGTTG +
Preference number: 4 (lower is better)
Translates to: WWGRLCWQPQFKKVGAPGGTCIL*RPSTAL
Trigger: CAACGCCGTGCTCGGGCGCCACAAGATGCACGTACC...GCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACCAGCTTCCTCTCGCCTaGCTCCTGCTGTTCCCACGC +
Preference number: 4 (lower is better)
Translates to: GAALLATPIQEGGSTRQHQLPLA*LLLFPR
Trigger: GCGTGGGAACAGCAGGAGCCAGGCGAGAGGAAGCTG...GTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTCACACAGCGGGCAGTaGCCACCTCCCAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: RLCWQPQFKKVGAPGSTGSHSGQ*PPPRAA
Trigger: TGCGGCTCTGGGAGGTGGCCACTGCCCGCTGTGTGA...CCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGGTCACTGGCTTCCCGTaGCAGATGCGCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RLCWQPQFKKVGAPGSTGVTGFP*QMRSRR
Trigger: CCTGCGGCTGCGCATCTGCCACGGGAAGCCAGTGAC...CCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCCCAGTCACTGGCTTCCCGTaGCAGATGCGCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: EHQAAQGKGSVDFSTTTPVTGFP*QMRSRR
Trigger: CCTGCGGCTGCGCATCTGCCACGGGAAGCCAGTGAC...TGGGGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp TCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCCCACCAGGGAGGGGATaGAGCTGCGCTTGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: SRRWEHQAAQGKGSVDFSPPGRG*SCACRP
Trigger: CGGCCGACAAGCGCAGCTTCATCCCCTCCCTGGTGG...GCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCGGATCCAGCCCATCTTaGTGGCGTGCACCATGCGAG +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSGSSPS*WRAPCE
Trigger: CTCGCATGGTGCACGCCATCAAGATGGGCTGGATCC...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp GGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACACCCCAGGAGAGACACTaGGGCACCGGACAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GRLCWQPQFKKVGAPGSTPQERH*GTGQGH
Trigger: GTGACCTTGTCCGGTGCCTCAGTGTCTCTCCTGGGG...TGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp GCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGGCCGTCGTCCGAGCCTaGCGCAAAGAGTGGGTACCG +
Preference number: 4 (lower is better)
Translates to: ATPIQEGGSTRQHRVKALAVVRA*RKEWVP
Trigger: CGGTACCCACTCTTTGCGTCAGGCTCGGACGACGGC...CAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp GGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACATGCCATGGCAGACGATaGCACTGCCGTCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: GRLCWQPQFKKVGAPGSTCHGRR*HCRRPS
Trigger: GCTCGGACGACGGCAGTGTCATCGTCTGCCATGGCA...TGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCGGCAGAACAGCTAGGTaGAGAGGCGGACAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSGRTAR*RGGQSR
Trigger: ACGGGACTGTCCGCCTCTTCACCTAGCTGTTCTGCC...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp GGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCAGGCAGAACAGCTAGGTaGAGAGGCGGACAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: GGGFVGNPNSRRWEHQAAGRTAR*RGGQSR
Trigger: ACGGGACTGTCCGCCTCTTCACCTAGCTGTTCTGCC...TGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCGCAGGGGCTTGTAGATaGGCCTGCCATCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSAGACR*ACHPGR
Trigger: ACGACCTGGATGGCAGGCGCATCTACAAGCCCCTGC...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp GGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACTCAACAGCTGATCTGTaGTGCCCGCCACCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: GAALLATPIQEGGSTRQHSTADL*CPPPAG
Trigger: ACCGGCTGGTGGCGGGCAGCACAGATCAGCTGTTGA...GTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp AGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGGGAACGGACTCTGGCTaGGGCGACGGCTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RRWEHQAAQGKGSVDFSTGTDSG*GDGSAG
Trigger: ACCAGCTGAGCCGTCGCCGCAGCCAGAGTCCGTTCC...CGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp CCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACGCACCTGTCCGTGGCTaGGGCGGAACGGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: PNSRRWEHQAAQGKGSVDAPVRG*GGTDSG
Trigger: GCCAGAGTCCGTTCCGCCGCAGCCACGGACAGGTGC...GTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp CCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTCACGTGGGGAAGGGCTaGAGGTCCCTCGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PIQEGGSTRQHRVKALLTHVGKG*RSLGRG
Trigger: GCCTCGGCCGAGGGACCTGCAGCCCTTCCCCACGTG...AGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp AGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGCGAGTCCTCCACGGCTaGAGCCACCAGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: RRWEHQAAQGKGSVDFSTRVLHG*SHQADS
Trigger: GCTGTCTGCCTGGTGGCTGCAGCCGTGGAGGACTCG...CGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp GGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACATTGTCACCTGCAGGGTaGACCGCCAGGCTGGACACC +
Preference number: 4 (lower is better)
Translates to: GRLCWQPQFKKVGAPGSTLSPAG*TARLDT
Trigger: GGTGTCCAGCCTGGCGGTGCACCCTGCAGGTGACAA...TGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCGATGACGTTGTCACCTaGAGGGTGCACCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSDDVVT*RVHRQA
Trigger: AGCCTGGCGGTGCACCCTGCAGGTGACAACGTCATC...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACGGGTGTGGCCTTGGGTaGCCAGCACCACGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PNSRRWEHQAAQGKGSVDGCGLG*PAPRPG
Trigger: ACCTGGCCGTGGTGCTGGCCACCCAAGGCCACACCC...GTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACACCTGGGTGTGGCCTTaGGTGGCCAGCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: PNSRRWEHQAAQGKGSVDTWVWP*VASTTA
Trigger: GGCCGTGGTGCTGGCCACCCAAGGCCACACCCAGGT...GTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGCGGCGGAACGGACTCTaGCTGCGGCGACGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLATPIQEGGSTRQHRVKRRNGL*LRRRLS
Trigger: GCTGAGCCGTCGCCGCAGCCAGAGTCCGTTCCGCCG...CTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACCGCTGCACCTGTCCGTaGCTGCGGCGGAACGGACTC +
Preference number: 4 (lower is better)
Translates to: PNSRRWEHQAAQGKGSVDRCTCP*LRRNGL
Trigger: GAGTCCGTTCCGCCGCAGCCACGGACAGGTGCAGCG...GTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACCTGGCAGGGCCAGCTTaGGAGCAGGTACGTGCATCT +
Preference number: 4 (lower is better)
Translates to: GAALLATPIQEGGSTRQHLAGPA*EQVRAS
Trigger: AGATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAG...GTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTTGTACGACTCGGCGTaGCCTGGCAGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RLCWQPQFKKVGAPGSTGLYDSA*PGRASL
Trigger: CAAGCTGGCCCTGCCAGGCCACGCCGAGTCGTACAA...CCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCCAGCTTCCTCTCGCCTaGCTCCTGCTGTTCCCACGC +
Preference number: 4 (lower is better)
Translates to: WEHQAAQGKGSVDFSTTTQLPLA*LLLFPR
Trigger: GCGTGGGAACAGCAGGAGCCAGGCGAGAGGAAGCTG...GGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCCCTGAAACCAGCCACTaGCCCCCAGGAGAGACACTG +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSPETSH*PPGETL
Trigger: CAGTGTCTCTCCTGGGGGCCAGTGGCTGGTTTCAGG...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCGGTCACCTGCGTCACTaGCTTCCCGTGGCAGATGCG +
Preference number: 4 (lower is better)
Translates to: WEHQAAQGKGSVDFSTTTGHLRH*LPVADA
Trigger: CGCATCTGCCACGGGAAGCCAGTGACGCAGGTGACC...GGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAGTGGGTACCGCGGGTaGAAGGCCACAGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: GFVGNPNSRRWEHQAAQGSGYRG*KATARR
Trigger: TCTGCGGGCTGTGGCCTTCCACCCGCGGTACCCACT...ACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp AGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGCGACGGCTCAGCTGGTaGATCAGCACCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RRWEHQAAQGKGSVDFSTRRLSW*ISTWVW
Trigger: CCACACCCAGGTGCTGATTCACCAGCTGAGCCGTCG...CGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp GGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACCGGCTCATAGGGGTTaGAGCCCACATCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: GGGFVGNPNSRRWEHQAAPAHRG*SPHPQT
Trigger: AGTTTGGGGATGTGGGCTTCAACCCCTATGAGCCGG...TGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TGGTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCACTCCAAGGGCACGTTaGCCACCGTGTTCCGGATGT +
Preference number: 4 (lower is better)
Translates to: WWGRLCWQPQFKKVGAPGTPRAR*PPCSGC
Trigger: ACATCCGGAACACGGTGGGCAACGTGCCCTTGGAGT...GCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp GGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCAGCTTGTAGATGCGCCTaGCATCCAGGTCGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: GGGFVGNPNSRRWEHQAAACRCA*HPGRSP
Trigger: TGGGCTACGACCTGGATGGCAGGCGCATCTACAAGC...TGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp CCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACACAGCTGATCTGTGCTaGCCGCCACCAGCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: PNSRRWEHQAAQGKGSVDTADLC*PPPAGP
Trigger: GGGACCGGCTGGTGGCGGGCAGCACAGATCAGCTGT...GTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACAGCTGATCTGTGCTaGCCGCCACCAGCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: SRRWEHQAAQGKGSVDFSTADLC*PPPAGP
Trigger: GGGACCGGCTGGTGGCGGGCAGCACAGATCAGCTGT...GCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp GGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACCTCACTGCTGTCACTaGCGGAATCTTCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GGGFVGNPNSRRWEHQAAPHCCH*RNLPGL
Trigger: CAGGCCTGGAAGATTCCGGCAGTGACAGCAGTGAGG...TGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp CGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGCAAGGAGTGCTGGCCTaGACCTGCTCCTCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: RLCWQPQFKKVGAPGSTGQGVLA*TCSSVV
Trigger: GACCACTGAGGAGCAGGTGCAGGCCAGCACTCCTTG...CCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCCATTCACCCTCATCTTaGGCTGCCGTGGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSHSPSS*AAVGTG
Trigger: ACCTGTGCCCACGGCAGCGCAAGATGAGGGTGAATG...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTCGGTTGGTCACCGGGTaGATCATGACGTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GFVGNPNSRRWEHQAAQGRLVTG*IMTSPL
Trigger: CAGCGGGGACGTCATGATCCACCCGGTGACCAACCG...ACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp AGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGTTGTACGACTCGGCGTaGCCTGGCAGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RRWEHQAAQGKGSVDFSTLYDSA*PGRASL
Trigger: CAAGCTGGCCCTGCCAGGCCACGCCGAGTCGTACAA...CGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCCCACACGGCTGGGTGGGGTaGAAGATGACGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: EHQAAQGKGSVDFSTTTPHGWVG*KMTSST
Trigger: AGTGCTGGACGTCATCTTCCACCCCACCCAGCCGTG...TGGGGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp TGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCCCGGCTCATAGGGGTTaGAGCCCACATCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: WEHQAAQGKGSVDFSTTTPAHRG*SPHPQT
Trigger: AGTTTGGGGATGTGGGCTTCAACCCCTATGAGCCGG...GGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp ATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCACCACCAGGGAGGGGATaGAGCTGCGCTTGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: IQEGGSTRQHRVKALLTSPPGRG*SCACRP
Trigger: CGGCCGACAAGCGCAGCTTCATCCCCTCCCTGGTGG...TGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp CCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACAGCGCTCCTCCTCGCTaGGCAGGTATTCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PNSRRWEHQAAQGKGSVDSAPPR*AGIQGV
Trigger: CACCCCCTGAATACCTGCTCAGCGAGGAGGAGCGCT...GTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp AGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGCGAAGCGTTCCTGGATaGAGCGTCCGTAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RRWEHQAAQGKGSVDFSTRSVPG*SVRRQA
Trigger: TGCCTGCCTACGGACGCTTCATCCAGGAACGCTTCG...CGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp TTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCCCCAGGAGAGACACTaGGGCACCGGACAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LATPIQEGGSTRQHRVKAPQERH*GTGQGH
Trigger: GTGACCTTGTCCGGTGCCTCAGTGTCTCTCCTGGGG...AGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp AACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGCCGTCGTCCGAGCCTaGCGCAAAGAGTGGGTACCG +
Preference number: 4 (lower is better)
Translates to: NPNSRRWEHQAAQGKGSVAVVRA*RKEWVP
Trigger: CGGTACCCACTCTTTGCGTCAGGCTCGGACGACGGC...AACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp GCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTATGCCATGGCAGACGATaGCACTGCCGTCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: ALLATPIQEGGSTRQHRVCHGRR*HCRRPS
Trigger: GCTCGGACGACGGCAGTGTCATCGTCTGCCATGGCA...TACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp GCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGGGGTGGGGTGGAAGATaGCGTCCAGCACTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: ATPIQEGGSTRQHRVKALGWGGR*RPALPD
Trigger: ATCTGGGAGTGCTGGACGTCATCTTCCACCCCACCC...CAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp GGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAACTCCAAGGGCACGTTaGCCACCGTGTTCCGGATGT +
Preference number: 4 (lower is better)
Translates to: GRLCWQPQFKKVGAPGSTTPRAR*PPCSGC
Trigger: ACATCCGGAACACGGTGGGCAACGTGCCCTTGGAGT...TGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp AACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTTGGAAGGCCACTCGCTaGACCTGTCCGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: NPNSRRWEHQAAQGKGSVWKATR*TCPWLR
Trigger: CCGCAGCCACGGACAGGTGCAGCGAGTGGCCTTCCA...AACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCCGCACCAGGGCCACCTaGTCATCCGTCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SRRWEHQAAQGKGSVDFSRTRAT*SSVSLR
Trigger: CCTGAGACTGACGGATGAGCAGGTGGCCCTGGTGCG...GCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp GGTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCACCCATCTTGATGGCGTaGACCATGCGAGAGACCTTC +
Preference number: 4 (lower is better)
Translates to: GGGGFVGNPNSRRWEHQAPILMA*TMRETF
Trigger: GAAGGTCTCTCGCATGGTGCACGCCATCAAGATGGG...TGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp GGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACACCTCACTGCTGTCACTaGCGGAATCTTCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GRLCWQPQFKKVGAPGSTPHCCH*RNLPGL
Trigger: CAGGCCTGGAAGATTCCGGCAGTGACAGCAGTGAGG...TGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp CCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTCTCTCGCCTGGCTCCTaGTGTTCCCACGCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: PIQEGGSTRQHRVKALLTLSPGS*CSHAKR
Trigger: GCGCTTGGCGTGGGAACAGCAGGAGCCAGGCGAGAG...AGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TGGTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCGCAGGCTCGGGAACTTaGGTGGCAAAAAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WWGRLCWQPQFKKVGAPGAGSGT*VAKSSA
Trigger: AGCTGAGCTTTTTGCCACGCAAGTTCCCGAGCCTGC...GCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGCGAGTCCTCCACGGCTaGAGCCACCAGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: LLATPIQEGGSTRQHRVKRVLHG*SHQADS
Trigger: GCTGTCTGCCTGGTGGCTGCAGCCGTGGAGGACTCG...CTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGGTGTGGCCTTGGGTaGCCAGCACCACGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: FVGNPNSRRWEHQAAQGKGCGLG*PAPRPG
Trigger: ACCTGGCCGTGGTGCTGGCCACCCAAGGCCACACCC...TTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTAGGCGGACGCTGCGCTaGGACGCCACCAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: PIQEGGSTRQHRVKALLTRRTLR*DATNRK
Trigger: CTTCCTGTTGGTGGCGTCCCAGCGCAGCGTCCGCCT...AGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCGGTGCACCGCCAGGCTaGACACCCACTTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SRRWEHQAAQGKGSVDFSGAPPG*TPTCSW
Trigger: CCAACTGCAAGTGGGTGTCCAGCCTGGCGGTGCACC...GCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAGGTACGTGCATCTTGTaGCGCCCGAGCACGGCGTTG +
Preference number: 4 (lower is better)
Translates to: ALLATPIQEGGSTRQHRVGTCIL*RPSTAL
Trigger: CAACGCCGTGCTCGGGCGCCACAAGATGCACGTACC...TACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCCATCTTGCGCTGCCGTaGGCACAGGTACAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: WEHQAAQGKGSVDFSTTTHLALP*AQVQVK
Trigger: CTTGACCTGTACCTGTGCCCACGGCAGCGCAAGATG...GGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACGGTCACCTGCGTCACTaGCTTCCCGTGGCAGATGCG +
Preference number: 4 (lower is better)
Translates to: PNSRRWEHQAAQGKGSVDGHLRH*LPVADA
Trigger: CGCATCTGCCACGGGAAGCCAGTGACGCAGGTGACC...GTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTAGTGGGTACCGCGGGTaGAAGGCCACAGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: PIQEGGSTRQHRVKALLTSGYRG*KATARR
Trigger: TCTGCGGGCTGTGGCCTTCCACCCGCGGTACCCACT...AGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACCCCAATTCAAGAAGGTaGGAGCACCAGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: GAALLATPIQEGGSTRQHPNSRR*EHQAAQ
Trigger: CTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG...GTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp CCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACCGAAGCGTTCCTGGATaGAGCGTCCGTAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PNSRRWEHQAAQGKGSVDRSVPG*SVRRQA
Trigger: TGCCTGCCTACGGACGCTTCATCCAGGAACGCTTCG...GTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp CCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTGTCCCTTCAGCACCTTaGCGGGCACCAGCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: PIQEGGSTRQHRVKALLTVPSAP*RAPARG
Trigger: ACCCCTTGCTGGTGCCCGTCAAGGTGCTGAAGGGAC...AGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp TTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGTCCCTTCAGCACCTTaGCGGGCACCAGCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LLATPIQEGGSTRQHRVKVPSAP*RAPARG
Trigger: ACCCCTTGCTGGTGCCCGTCAAGGTGCTGAAGGGAC...CTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp ATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGGTAGAGGCGGACGCTaGGCTGGGACGCCACCAACA +
Preference number: 4 (lower is better)
Translates to: IQEGGSTRQHRVKALLTSGRGGR*AGTPPT
Trigger: TGTTGGTGGCGTCCCAGCGCAGCGTCCGCCTCTACC...TGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp CCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTGGGAGCAGGTACGTaGATCTTGTGGCGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: PNSRRWEHQAAQGKGSVDLGAGT*ILWRPS
Trigger: GCTCGGGCGCCACAAGATGCACGTACCTGCTCCCAA...GTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp GCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGCATTCACCCTCATCTTaGGCTGCCGTGGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: ATPIQEGGSTRQHRVKALHSPSS*AAVGTG
Trigger: ACCTGTGCCCACGGCAGCGCAAGATGAGGGTGAATG...CAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp AATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCGCGGACAGTCCCGTCTaGCCCCGAGGAGAAGACCCA +
Preference number: 4 (lower is better)
Translates to: NSRRWEHQAAQGKGSVDFADSPV*PRGEDP
Trigger: TGGGTCTTCTCCTCGGGGGCAGACGGGACTGTCCGC...GAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp ATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGGCAGACAGCGGGGCTaGGGTTCCAGGCCACACTCT +
Preference number: 4 (lower is better)
Translates to: IQEGGSTRQHRVKALLTSGRQRG*GSRPHS
Trigger: AGAGTGTGGCCTGGAACCCCAGCCCCGCTGTCTGCC...TGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp AACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTCGGTTGGTCACCGGGTaGATCATGACGTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: NPNSRRWEHQAAQGKGSVRLVTG*IMTSPL
Trigger: CAGCGGGGACGTCATGATCCACCCGGTGACCAACCG...AACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACCTGGCAGGGCCAGCTTaGGAGCAGGTACGTGCATCT +
Preference number: 4 (lower is better)
Translates to: PNSRRWEHQAAQGKGSVDLAGPA*EQVRAS
Trigger: AGATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAG...GTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCAGCTCGGGAACTTGCGTaGCAAAAAGCTCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GGGFVGNPNSRRWEHQAAARELA*QKAQLP
Trigger: AGGAAGCTGAGCTTTTTGCCACGCAAGTTCCCGAGC...TGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTACCTGAAACCAGCCACTaGCCCCCAGGAGAGACACTG +
Preference number: 4 (lower is better)
Translates to: ALLATPIQEGGSTRQHRVPETSH*PPGETL
Trigger: CAGTGTCTCTCCTGGGGGCCAGTGGCTGGTTTCAGG...TACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp AATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCTCACACAGCGGGCAGTaGCCACCTCCCAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: NSRRWEHQAAQGKGSVDFSHSGQ*PPPRAA
Trigger: TGCGGCTCTGGGAGGTGGCCACTGCCCGCTGTGTGA...GAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCCACGGCTGGGTGGGGTaGAAGATGACGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: SRRWEHQAAQGKGSVDFSHGWVG*KMTSST
Trigger: AGTGCTGGACGTCATCTTCCACCCCACCCAGCCGTG...GCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp TTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAAGCGCTCCTCCTCGCTaGGCAGGTATTCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: FVGNPNSRRWEHQAAQGKSAPPR*AGIQGV
Trigger: CACCCCCTGAATACCTGCTCAGCGAGGAGGAGCGCT...TTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp AACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTTTGGGAGCAGGTACGTaGATCTTGTGGCGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: NPNSRRWEHQAAQGKGSVLGAGT*ILWRPS
Trigger: GCTCGGGCGCCACAAGATGCACGTACCTGCTCCCAA...AACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp AACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTACCCTCATCTTGCGCTaGCGTGGGCACAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: NPNSRRWEHQAAQGKGSVTLILR*RGHRYR
Trigger: CCTGTACCTGTGCCCACGGCAGCGCAAGATGAGGGT...AACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAATTGTCACCTGCAGGGTaGACCGCCAGGCTGGACACC +
Preference number: 4 (lower is better)
Translates to: FVGNPNSRRWEHQAAQGKLSPAG*TARLDT
Trigger: GGTGTCCAGCCTGGCGGTGCACCCTGCAGGTGACAA...TTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp AACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGATGACGTTGTCACCTaGAGGGTGCACCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: NPNSRRWEHQAAQGKGSVDDVVT*RVHRQA
Trigger: AGCCTGGCGGTGCACCCTGCAGGTGACAACGTCATC...AACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp ATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGGTGCACCGCCAGGCTaGACACCCACTTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: IQEGGSTRQHRVKALLTSGAPPG*TPTCSW
Trigger: CCAACTGCAAGTGGGTGTCCAGCCTGGCGGTGCACC...TGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCATCTTGCGCTGCCGTaGGCACAGGTACAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: LATPIQEGGSTRQHRVKAHLALP*AQVQVK
Trigger: CTTGACCTGTACCTGTGCCCACGGCAGCGCAAGATG...AGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACATGGGGGCGGCTTTGTTaGCAACCCCAATTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GRLCWQPQFKKVGAPGSTWGRLC*QPQFKK
Trigger: CTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA...TGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp AATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCGCATCAGCTTCTTGGTaGGCTCCTGGCGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: NSRRWEHQAAQGKGSVDFASASW*APGAAG
Trigger: ACCTGCTGCGCCAGGAGCTCACCAAGAAGCTGATGC...GAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp TTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGATCCAGCCCATCTTaGTGGCGTGCACCATGCGAG +
Preference number: 4 (lower is better)
Translates to: FVGNPNSRRWEHQAAQGKGSSPS*WRAPCE
Trigger: CTCGCATGGTGCACGCCATCAAGATGGGCTGGATCC...TTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp TTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGGTGGGGTGGAAGATaGCGTCCAGCACTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: FVGNPNSRRWEHQAAQGKGWGGR*RPALPD
Trigger: ATCTGGGAGTGCTGGACGTCATCTTCCACCCCACCC...TTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTTGTAGATGCGCCTaGCATCCAGGTCGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: LLATPIQEGGSTRQHRVKACRCA*HPGRSP
Trigger: TGGGCTACGACCTGGATGGCAGGCGCATCTACAAGC...CTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAATCAACAGCTGATCTGTaGTGCCCGCCACCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: FVGNPNSRRWEHQAAQGKSTADL*CPPPAG
Trigger: ACCGGCTGGTGGCGGGCAGCACAGATCAGCTGTTGA...TTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCCCATCTTGATGGCGTaGACCATGCGAGAGACCTTC +
Preference number: 4 (lower is better)
Translates to: LATPIQEGGSTRQHRVKAPILMA*TMRETF
Trigger: GAAGGTCTCTCGCATGGTGCACGCCATCAAGATGGG...AGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp ATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCACAAGGAGTGCTGGCCTaGACCTGCTCCTCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: IQEGGSTRQHRVKALLTSQGVLA*TCSSVV
Trigger: GACCACTGAGGAGCAGGTGCAGGCCAGCACTCCTTG...TGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCGCAGGCTCGGGAACTTaGGTGGCAAAAAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SRRWEHQAAQGKGSVDFSAGSGT*VAKSSA
Trigger: AGCTGAGCTTTTTGCCACGCAAGTTCCCGAGCCTGC...GCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp AATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCACCCTCATCTTGCGCTaGCGTGGGCACAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: NSRRWEHQAAQGKGSVDFTLILR*RGHRYR
Trigger: CCTGTACCTGTGCCCACGGCAGCGCAAGATGAGGGT...GAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTATCTTGTCCAGGAACTaGTCCAGCTCATCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: LATPIQEGGSTRQHRVKAILSRN*SSSSRV
Trigger: GACCCGGGATGAGCTGGACCAGTTCCTGGACAAGAT...AGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCTTTTTAATCCCACTGTaGCCCTCGTCATCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSFLIPL*PSSSRA
Trigger: AGCCCTTGATGACGAGGGCCACAGTGGGATTAAAAA...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCTCCTGTATGGCTTGGTaGAAAGATCCAGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: WWGRLCWQPQFKKVGAPGSCMAW*KDPGQT
Trigger: GGTTTGACCTGGATCTTTCCACCAAGCCATACAGGA...GCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCGCATCCTGTATGGCTTaGTGGAAAGATCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSASCMA*WKDPGQ
Trigger: TTGACCTGGATCTTTCCACCAAGCCATACAGGATGC...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCCGCAGAGCCTTCTTGTaGTGTCTCAGCATCCTGTAT +
Preference number: 4 (lower is better)
Translates to: WEHQAAQGKGSVDFSTTTRRAFL*CLSILY
Trigger: ATACAGGATGCTGAGACACCACAAGAAGGCTCTGCG...GGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp GGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACACGCAGAGCCTTCTTGTaGTGTCTCAGCATCCTGTAT +
Preference number: 4 (lower is better)
Translates to: GRLCWQPQFKKVGAPGSTRRAFL*CLSILY
Trigger: ATACAGGATGCTGAGACACCACAAGAAGGCTCTGCG...TGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCCCCAATTCAAGAAGGTaGGAGCACCAGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: SRRWEHQAAQGKGSVDFSPNSRR*EHQAAQ
Trigger: CTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG...GCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp ATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCACGTAGCTCCCACAGATaGCGTTGTCACCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: IQEGGSTRQHRVKALLTSRSSHR*RCHLQG
Trigger: ACCCTGCAGGTGACAACGTCATCTGTGGGAGCTACG...TGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR TCA 90 bp AATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCCGTAGCTCCCACAGATaGCGTTGTCACCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: NSRRWEHQAAQGKGSVDFRSSHR*RCHLQG
Trigger: ACCCTGCAGGTGACAACGTCATCTGTGGGAGCTACG...GAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAACAGGTATTCAGGGGGTaGGTTGTACGACTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: FVGNPNSRRWEHQAAQGKQVFRG*VVRLGV
Trigger: CACGCCGAGTCGTACAACCCACCCCCTGAATACCTG...TTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp AATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCCAGGTATTCAGGGGGTaGGTTGTACGACTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: NSRRWEHQAAQGKGSVDFQVFRG*VVRLGV
Trigger: CACGCCGAGTCGTACAACCCACCCCCTGAATACCTG...GAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCTCCTGTATGGCTTGGTaGAAAGATCCAGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: WEHQAAQGKGSVDFSTTTSCMAW*KDPGQT
Trigger: GGTTTGACCTGGATCTTTCCACCAAGCCATACAGGA...GGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTCTCAGCATCCTGTATaGCTTGGTGGAAAGATCCAG +
Preference number: 4 (lower is better)
Translates to: RLCWQPQFKKVGAPGSTGSQHPV*LGGKIQ
Trigger: CTGGATCTTTCCACCAAGCCATACAGGATGCTGAGA...CCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp CCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTGGGGGCGGCTTTGTTaGCAACCCCAATTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: PNSRRWEHQAAQGKGSVDWGRLC*QPQFKK
Trigger: CTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA...GTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCGTCATCATCCTCACTaGTGTCACTGCCGGAATCTT +
Preference number: 4 (lower is better)
Translates to: LATPIQEGGSTRQHRVKARHHPH*CHCRNL
Trigger: AAGATTCCGGCAGTGACAGCAGTGAGGATGATGACG...AGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACCAGCAAGGGGTTCTaGAGAAGGTCATTGTACACC +
Preference number: 4 (lower is better)
Translates to: SRRWEHQAAQGKGSVDFSTSKGF*RRSLYT
Trigger: GGTGTACAATGACCTTCTGCAGAACCCCTTGCTGGT...GCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp ATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAATCTTGTCCAGGAACTaGTCCAGCTCATCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: IQEGGSTRQHRVKALLTSILSRN*SSSSRV
Trigger: GACCCGGGATGAGCTGGACCAGTTCCTGGACAAGAT...TGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp AGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGTTTTTAATCCCACTGTaGCCCTCGTCATCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RRWEHQAAQGKGSVDFSTFLIPL*PSSSRA
Trigger: AGCCCTTGATGACGAGGGCCACAGTGGGATTAAAAA...CGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp AACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTCAAACCACACCAGCTTaGTATCGTAGCTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: NPNSRRWEHQAAQGKGSVQTTPA*YRSSHR
Trigger: TCTGTGGGAGCTACGATAGCAAGCTGGTGTGGTTTG...AACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp AACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTACCAGCAAGGGGTTCTaGAGAAGGTCATTGTACACC +
Preference number: 4 (lower is better)
Translates to: NPNSRRWEHQAAQGKGSVTSKGF*RRSLYT
Trigger: GGTGTACAATGACCTTCTGCAGAACCCCTTGCTGGT...AACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp AATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCCAAACCACACCAGCTTaGTATCGTAGCTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: NSRRWEHQAAQGKGSVDFQTTPA*YRSSHR
Trigger: TCTGTGGGAGCTACGATAGCAAGCTGGTGTGGTTTG...GAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR GCA 90 bp TTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAACGTCATCATCCTCACTaGTGTCACTGCCGGAATCTT +
Preference number: 4 (lower is better)
Translates to: FVGNPNSRRWEHQAAQGKRHHPH*CHCRNL
Trigger: AAGATTCCGGCAGTGACAGCAGTGAGGATGATGACG...TTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp TTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGCATCCTGTATGGCTTaGTGGAAAGATCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: FVGNPNSRRWEHQAAQGKASCMA*WKDPGQ
Trigger: TTGACCTGGATCTTTCCACCAAGCCATACAGGATGC...TTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CCA 90 bp ATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCATCTCAGCATCCTGTATaGCTTGGTGGAAAGATCCAG +
Preference number: 4 (lower is better)
Translates to: IQEGGSTRQHRVKALLTSSQHPV*LGGKIQ
Trigger: CTGGATCTTTCCACCAAGCCATACAGGATGCTGAGA...TGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 90 bp GCCCCACGTACCTTCCCGTGGCAGATGCGCAGCCGCAGGCCCACTTaGCGCTCCTCCTCTGAGGCCTCCAGCCAGCGGGCCGGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: APRTFPWQMRSRRPT*RSSSEASSQRAGCK
Trigger: CTTGCAGCCGGCCCGCTGGCTGGAGGCCTCAGAGGAGGAGCGCCAAGTGGGCCTGCGGCTGCGCATCTGCCACGGGAAGGTACGTGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568812.1
ENST00000647369.1
CDS CCA 90 bp AGGAAGGGCCGGGCAGGGTGGAAGGCCACTCGCTGCACCTGTCCGTaGCTGCGGCGGAACGGACTCTGGCTGCGGCGACGGCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: RKGRAGWKATRCTCP*LRRNGLWLRRRLSW
Trigger: CCAGCTGAGCCGTCGCCGCAGCCAGAGTCCGTTCCGCCGCAGCCACGGACAGGTGCAGCGAGTGGCCTTCCACCCTGCCCGGCCCTTCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS GCA 90 bp AGGGCCGGGCAGGGTGGAAGGCCACTCGCTGCACCTGTCCGTGGCTaGGGCGGAACGGACTCTGGCTGCGGCGACGGCTCAGCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: RAGQGGRPLAAPVRG*GGTDSGCGDGSAGE
Trigger: TTCACCAGCTGAGCCGTCGCCGCAGCCAGAGTCCGTTCCGCCGCAGCCACGGACAGGTGCAGCGAGTGGCCTTCCACCCTGCCCGGCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS GCA 90 bp GACGCCACCAACAGGAAGGGCCGGGCAGGGTGGAAGGCCACTCGCTaGACCTGTCCGTGGCTGCGGCGGAACGGACTCTGGCTGCGGCGA +
Preference number: 5 (lower is better)
Translates to: DATNRKGRAGWKATR*TCPWLRRNGLWLRR
Trigger: TCGCCGCAGCCAGAGTCCGTTCCGCCGCAGCCACGGACAGGTGCAGCGAGTGGCCTTCCACCCTGCCCGGCCCTTCCTGTTGGTGGCGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS CCA 90 bp CCCCAATCCGGGCGCTCGCCATCTCTGTCCTCGGGCAAGGAGTGCTaGCCTCCGGCTCGGGCTCAGGCTCCAGTTCGGGCTCAGACCGCC +
Preference number: 5 (lower is better)
Translates to: PQSGRSPSLSSGKEC*PPARAQAPVRAQTA
Trigger: GGCGGTCTGAGCCCGAACTGGAGCCTGAGCCCGAGCCGGAGGCCAGCACTCCTTGCCCGAGGACAGAGATGGCGAGCGCCCGGATTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569403.1
ENST00000647429.1
CDS CCA 90 bp TGCGTCACTGGCTTCCCGTGGCAGATGCGCAGCCGCAGGCCCACTTaGCGCTCCTCCTCTGAGGCCTCCAGCCAGCGGGCCGGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: CVTGFPWQMRSRRPT*RSSSEASSQRAGCK
Trigger: CTTGCAGCCGGCCCGCTGGCTGGAGGCCTCAGAGGAGGAGCGCCAAGTGGGCCTGCGGCTGCGCATCTGCCACGGGAAGCCAGTGACGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS TCA 90 bp GTGCCAGGTCACCTGCGTCACTGGCTGCAGGAGAGCAAGGCTGGCTaGGTGGCTGAGCCGGGCCCCTCCCGCTGCAGCCTCACCCCCAAG +
Preference number: 5 (lower is better)
Translates to: VPGHLRHWLQESKAG*VAEPGPSRCSLTPK
Trigger: CTTGGGGGTGAGGCTGCAGCGGGAGGGGCCCGGCTCAGCCACTCAGCCAGCCTTGCTCTCCTGCAGCCAGTGACGCAGGTGACCTGGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568812.1
ENST00000647369.1
CDS TCA 90 bp TGGCTGCGGCGGAACGGACTCTGGCTGCGGCGACGGCTCAGCTGGTaGATCAGCACCTGGGTGTGGCCTTGGGTGGCCAGCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: WLRRNGLWLRRRLSW*ISTWVWPWVASTTA
Trigger: GGCCGTGGTGCTGGCCACCCAAGGCCACACCCAGGTGCTGATTCACCAGCTGAGCCGTCGCCGCAGCCAGAGTCCGTTCCGCCGCAGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS GCA 90 bp TGCAGCCTCACCCCCAAGGCGCCCCACGTACCTTCCCGTGGCAGATaGGCAGCCGCAGGCCCACTTGGCGCTCCTCCTCTGAGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: CSLTPKAPHVPSRGR*AAAGPLGAPPLRPP
Trigger: TGGAGGCCTCAGAGGAGGAGCGCCAAGTGGGCCTGCGGCTGCGCATCTGCCACGGGAAGGTACGTGGGGCGCCTTGGGGGTGAGGCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568812.1
ENST00000647369.1
CDS GCA 90 bp TACGACTCGGCGTGGCCTGGCAGGGCCAGCTTGGGAGCAGGTACGTaGATCTTGTGGCGCCCGAGCACGGCGTTGGGGTCCTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: YDSAWPGRASLGAGT*ILWRPSTALGSSWA
Trigger: GGCCCAGGAGGACCCCAACGCCGTGCTCGGGCGCCACAAGATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAGGCCACGCCGAGTCGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 90 bp GCGTGGCCTGGCAGGGCCAGCTTGGGAGCAGGTACGTGCATCTTGTaGCGCCCGAGCACGGCGTTGGGGTCCTCCTGGGCCCACAGGTCA +
Preference number: 5 (lower is better)
Translates to: AWPGRASLGAGTCIL*RPSTALGSSWAHRS
Trigger: TGACCTGTGGGCCCAGGAGGACCCCAACGCCGTGCTCGGGCGCCACAAGATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAGGCCACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS GCA 90 bp GGGGCTCCTCAGGCGGGACGAAGGCGCTCAACAGCTGATCTGTGCTaGCCGCCACCAGCCGGTCCCCCAGAGCTGGGTTCAGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GAPQAGRRRSTADLC*PPPAGPPELGSAAA
Trigger: TGCTGCTGCTGAACCCAGCTCTGGGGGACCGGCTGGTGGCGGGCAGCACAGATCAGCTGTTGAGCGCCTTCGTCCCGCCTGAGGAGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS CCA 90 bp GGCGACGGCTCAGCTGGTGAATCAGCACCTGGGTGTGGCCTTGGGTaGCCAGCACCACGGCCAGGTAGTCCCCACGCCCGTGCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: GDGSAGESAPGCGLG*PAPRPGSPHARARS
Trigger: TGACCTGGCACGGGCGTGGGGACTACCTGGCCGTGGTGCTGGCCACCCAAGGCCACACCCAGGTGCTGATTCACCAGCTGAGCCGTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS CCA 90 bp CAGGGGGTGGGTTGTACGACTCGGCGTGGCCTGGCAGGGCCAGCTTaGGAGCAGGTACGTGCATCTTGTGGCGCCCGAGCACGGCGTTGG +
Preference number: 5 (lower is better)
Translates to: QGVGCTTRRGLAGPA*EQVRASCGARARRW
Trigger: CCAACGCCGTGCTCGGGCGCCACAAGATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAGGCCACGCCGAGTCGTACAACCCACCCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 90 bp CAACAGCTGATCTGTGCTGCCCGCCACCAGCCGGTCCCCCAGAGCTaGGTTCAGCAGCAGCACCGAGTCCTCCCTGTGAGCCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: QQLICAARHQPVPQS*VQQQHRVLPVSQAQ
Trigger: CTGGGCCTGGCTCACAGGGAGGACTCGGTGCTGCTGCTGAACCCAGCTCTGGGGGACCGGCTGGTGGCGGGCAGCACAGATCAGCTGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568812.1
ENST00000647369.1
CDS GCA 90 bp ACATCCCCAAACTGGCCACTCTGCAGCCGCCGCACCAGGGCCACCTaGTCATCCGTCAGTCTCAGGTCCCGCCCTGTCATCGGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: TSPNWPLCSRRTRAT*SSVSLRSRPVIGSC
Trigger: GCAGGACCCGATGACAGGGCGGGACCTGAGACTGACGGATGAGCAGGTGGCCCTGGTGCGGCGGCTGCAGAGTGGCCAGTTTGGGGATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000569160.1
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000644494.1
ENST00000647429.1
CDS CCA 90 bp GCTTGGGAGCAGGTACGTGCATCTTGTGGCGCCCGAGCACGGCGTTaGGGTCCTCCTGGGCCCACAGGTCATAGAAGCTGGGGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: AWEQVRASCGARARR*GPPGPTGHRSWGWG
Trigger: ACCCCACCCCCAGCTTCTATGACCTGTGGGCCCAGGAGGACCCCAACGCCGTGCTCGGGCGCCACAAGATGCACGTACCTGCTCCCAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 90 bp TTCCCACGCCAAGCGCTCCTCCTCGCTGAGCAGGTATTCAGGGGGTaGGTTGTACGACTCGGCGTGGCCTGGCAGGGCCAGCTTGGGAGC +
Preference number: 5 (lower is better)
Translates to: FPRQALLLAEQVFRG*VVRLGVAWQGQLGS
Trigger: GCTCCCAAGCTGGCCCTGCCAGGCCACGCCGAGTCGTACAACCCACCCCCTGAATACCTGCTCAGCGAGGAGGAGCGCTTGGCGTGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS TCA 90 bp GTGGGCACAGGTACAGGTCAAGGCAGCGCTCGAAGCGTTCCTGGATaGAGCGTCCGTAGGCAGGCACGGCCCGCAGGCTCGGGAACTTGC +
Preference number: 5 (lower is better)
Translates to: VGTGTGQGSARSVPG*SVRRQARPAGSGTC
Trigger: GCAAGTTCCCGAGCCTGCGGGCCGTGCCTGCCTACGGACGCTTCATCCAGGAACGCTTCGAGCGCTGCCTTGACCTGTACCTGTGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS GCA 90 bp CCCAGGCAGGCAGAACAGCTAGGTGAAGAGGCGGACAGTCCCGTCTaGCCCCGAGGAGAAGACCCACGGCTGGGTGGGGTGGAAGATGAC +
Preference number: 5 (lower is better)
Translates to: PRQAEQLGEEADSPV*PRGEDPRLGGVEDD
Trigger: GTCATCTTCCACCCCACCCAGCCGTGGGTCTTCTCCTCGGGGGCAGACGGGACTGTCCGCCTCTTCACCTAGCTGTTCTGCCTGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS GCA 90 bp CGTAGCCCACGTGGGGGAAGTCATCGTACCACTCCAAGGGCACGTTaGCCACCGTGTTCCGGATGTCCTGCAGCCGGGGGCCACCATGTC +
Preference number: 5 (lower is better)
Translates to: RSPRGGSHRTTPRAR*PPCSGCPAAGGHHV
Trigger: GACATGGTGGCCCCCGGCTGCAGGACATCCGGAACACGGTGGGCAACGTGCCCTTGGAGTGGTACGATGACTTCCCCCACGTGGGCTACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569160.1
ENST00000644494.1
CDS CCA 90 bp GCTGAGCAGGTATTCAGGGGGTGGGTTGTACGACTCGGCGTGGCCTaGCAGGGCCAGCTTGGGAGCAGGTACGTGCATCTTGTGGCGCCC +
Preference number: 5 (lower is better)
Translates to: AEQVFRGWVVRLGVA*QGQLGSRYVHLVAP
Trigger: GGGCGCCACAAGATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAGGCCACGCCGAGTCGTACAACCCACCCCCTGAATACCTGCTCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 90 bp AAGAGGCGGACAGTCCCGTCTGCCCCCGAGGAGAAGACCCACGGCTaGGTGGGGTGGAAGATGACGTCCAGCACTCCCAGATCTCGGGTC +
Preference number: 5 (lower is better)
Translates to: KRRTVPSAPEEKTHG*VGWKMTSSTPRSRV
Trigger: GACCCGAGATCTGGGAGTGCTGGACGTCATCTTCCACCCCACCCAGCCGTGGGTCTTCTCCTCGGGGGCAGACGGGACTGTCCGCCTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACCTGGGTGTGGCCTaGGGTGGCCAGCACCACGGC +
Preference number: 5 (lower is better)
Translates to: VGAALLATPIQEGGSTRQHLGVA*GGQHHG
Trigger: GCCGTGGTGCTGGCCACCCAAGGCCACACCCAGGTG...CTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGCGCCCGAGCACGGCGTaGGGGTCCTCCTGGGCCCAC +
Preference number: 5 (lower is better)
Translates to: ATPIQEGGSTRQHRVKALRPSTA*GSSWAH
Trigger: GTGGGCCCAGGAGGACCCCAACGCCGTGCTCGGGCG...CAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS TCA 90 bp CGTGCACCATGCGAGAGACCTTCTCCTTCTCCACCAGGGAGGGGATaGAGCTGCGCTTGTCGGCCGGGCGGTTGGTCACCGGGTGGATCA +
Preference number: 5 (lower is better)
Translates to: RAPCERPSPSPPGRG*SCACRPGGWSPGGS
Trigger: TGATCCACCCGGTGACCAACCGCCCGGCCGACAAGCGCAGCTTCATCCCCTCCCTGGTGGAGAAGGAGAAGGTCTCTCGCATGGTGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000647429.1
CDS TCA 90 bp ACGTGGGGAAGGGCTGCAGGTCCCTCGGCCGAGGCAGCTTGGGGATaGGGTCCTCAGGGTCTACATTCACCCTCATCTTGCGCTGCCGTG +
Preference number: 5 (lower is better)
Translates to: TWGRAAGPSAEAAWG*GPQGLHSPSSCAAV
Trigger: CACGGCAGCGCAAGATGAGGGTGAATGTAGACCCTGAGGACCTCATCCCCAAGCTGCCTCGGCCGAGGGACCTGCAGCCCTTCCCCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS GCA 90 bp CCAGGAACTGGTCCAGCTCATCCCGGGTCCGCAGGGGCTTGTAGATaGGCCTGCCATCCAGGTCGTAGCCCACGTGGGGGAAGTCATCGT +
Preference number: 5 (lower is better)
Translates to: PGTGPAHPGSAGACR*ACHPGRSPRGGSHR
Trigger: ACGATGACTTCCCCCACGTGGGCTACGACCTGGATGGCAGGCGCATCTACAAGCCCCTGCGGACCCGGGATGAGCTGGACCAGTTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000563210.1
ENST00000569160.1
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000644494.1
ENST00000647182.1
ENST00000647429.1
CDS CCA 90 bp GAAGCGTCCGTAGGCAGGCACGGCCCGCAGGCTCGGGAACTTGCGTaGCAAAAAGCTCAGCTTCCTCTCGCCTGGCTCCTGCTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: EASVGRHGPQARELA*QKAQLPLAWLLLFP
Trigger: TGGGAACAGCAGGAGCCAGGCGAGAGGAAGCTGAGCTTTTTGCCACGCAAGTTCCCGAGCCTGCGGGCCGTGCCTGCCTACGGACGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACGCAGGTACGTGCATCTaGTGGCGCCCGAGCACGGCG +
Preference number: 5 (lower is better)
Translates to: GAALLATPIQEGGSTRQHAGTCI*WRPSTA
Trigger: CGCCGTGCTCGGGCGCCACAAGATGCACGTACCTGC...GTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS GCA 90 bp ACTGGTCCAGCTCATCCCGGGTCCGCAGGGGCTTGTAGATGCGCCTaGCATCCAGGTCGTAGCCCACGTGGGGGAAGTCATCGTACCACT +
Preference number: 5 (lower is better)
Translates to: TGPAHPGSAGACRCA*HPGRSPRGGSHRTT
Trigger: AGTGGTACGATGACTTCCCCCACGTGGGCTACGACCTGGATGGCAGGCGCATCTACAAGCCCCTGCGGACCCGGGATGAGCTGGACCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000563210.1
ENST00000569160.1
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000644494.1
ENST00000647182.1
ENST00000647429.1
CDS CCA 90 bp TCCTCGCTGAGCAGGTATTCAGGGGGTGGGTTGTACGACTCGGCGTaGCCTGGCAGGGCCAGCTTGGGAGCAGGTACGTGCATCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SSLSRYSGGGLYDSA*PGRASLGAGTCILW
Trigger: CCACAAGATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAGGCCACGCCGAGTCGTACAACCCACCCCCTGAATACCTGCTCAGCGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 90 bp CAGGCTCGGGAACTTGCGTGGCAAAAAGCTCAGCTTCCTCTCGCCTaGCTCCTGCTGTTCCCACGCCAAGCGCTCCTCCTCGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: QARELAWQKAQLPLA*LLLFPRQALLLAEQ
Trigger: CTGCTCAGCGAGGAGGAGCGCTTGGCGTGGGAACAGCAGGAGCCAGGCGAGAGGAAGCTGAGCTTTTTGCCACGCAAGTTCCCGAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 90 bp ACACTGCCGTCGTCCGAGCCTGACGCAAAGAGTGGGTACCGCGGGTaGAAGGCCACAGCCCGCAGAGCCTTCTTGTGGTGTCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: TLPSSEPDAKSGYRG*KATARRAFLWCLSI
Trigger: GATGCTGAGACACCACAAGAAGGCTCTGCGGGCTGTGGCCTTCCACCCGCGGTACCCACTCTTTGCGTCAGGCTCGGACGACGGCAGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCATTGTCGGCCGGGCGGTaGGTCACCGGGTGGATCATG +
Preference number: 5 (lower is better)
Translates to: GGGFVGNPNSRRWEHQAALSAGR*VTGWIM
Trigger: CATGATCCACCCGGTGACCAACCGCCCGGCCGACAA...TGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGTTGTCGGCCGGGCGGTaGGTCACCGGGTGGATCATG +
Preference number: 5 (lower is better)
Translates to: VGAALLATPIQEGGSTRQLSAGR*VTGWIM
Trigger: CATGATCCACCCGGTGACCAACCGCCCGGCCGACAA...CTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp CCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTCGCCCGAGCACGGCGTaGGGGTCCTCCTGGGCCCAC +
Preference number: 5 (lower is better)
Translates to: PIQEGGSTRQHRVKALLTRPSTA*GSSWAH
Trigger: GTGGGCCCAGGAGGACCCCAACGCCGTGCTCGGGCG...AGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS GCA 90 bp CGTAGCCCACGTGGGGGAAGTCATCGTACCACTCCAAGGGCACGTTaGCCACCGTGTTCCGGATGTCCTCCTCATCAGAGCTGTCCTCCG +
Preference number: 5 (lower is better)
Translates to: RSPRGGSHRTTPRAR*PPCSGCPPHQSCPP
Trigger: CGGAGGACAGCTCTGATGAGGAGGACATCCGGAACACGGTGGGCAACGTGCCCTTGGAGTGGTACGATGACTTCCCCCACGTGGGCTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000647429.1
CDS-3UTR CAA 90 bp TGGTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCCACTCCAAGGGCACGTaGCCCACCGTGTTCCGGATG +
Preference number: 5 (lower is better)
Translates to: WWGRLCWQPQFKKVGAPGHSKGT*PTVFRM
Trigger: CATCCGGAACACGGTGGGCAACGTGCCCTTGGAGTG...GCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 90 bp GTGCTGGCCTGCACCTGCTCCTCAGTGGTCTTTTTAATCCCACTGTaGCCCTCGTCATCAAGGGCTCCGTCCTCTCCCTCCTCGTCGCCT +
Preference number: 5 (lower is better)
Translates to: VLACTCSSVVFLIPL*PSSSRAPSSPSSSP
Trigger: AGGCGACGAGGAGGGAGAGGACGGAGCCCTTGATGACGAGGGCCACAGTGGGATTAAAAAGACCACTGAGGAGCAGGTGCAGGCCAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp AACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTCACCTGGGTGTGGCCTaGGGTGGCCAGCACCACGGC +
Preference number: 5 (lower is better)
Translates to: NPNSRRWEHQAAQGKGSVHLGVA*GGQHHG
Trigger: GCCGTGGTGCTGGCCACCCAAGGCCACACCCAGGTG...AACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGCCTGGCAGGGCCAGCTaGGGAGCAGGTACGTGCATC +
Preference number: 5 (lower is better)
Translates to: ATPIQEGGSTRQHRVKALPGRAS*GAGTCI
Trigger: GATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAGG...CAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACTATTCAGGGGGTGGGTaGTACGACTCGGCGTGGCCT +
Preference number: 5 (lower is better)
Translates to: GAALLATPIQEGGSTRQHYSGGG*YDSAWP
Trigger: AGGCCACGCCGAGTCGTACAACCCACCCCCTGAATA...GTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp CCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACCTCGGCCGAGGCAGCTaGGGGATGAGGTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: PNSRRWEHQAAQGKGSVDLGRGS*GMRSSG
Trigger: CCCTGAGGACCTCATCCCCAAGCTGCCTCGGCCGAG...GTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACTCCCACAGATGACGTaGTCACCTGCAGGGTGCACC +
Preference number: 5 (lower is better)
Translates to: GGGFVGNPNSRRWEHQAALPQMT*SPAGCT
Trigger: GGTGCACCCTGCAGGTGACAACGTCATCTGTGGGAG...TGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GGTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCCCGCAGAGCCTTCTaGTGGTGTCTCAGCATCCTG +
Preference number: 5 (lower is better)
Translates to: GGGGFVGNPNSRRWEHQAARRAF*WCLSIL
Trigger: CAGGATGCTGAGACACCACAAGAAGGCTCTGCGGGC...TGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp TGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCTGTCCCTTCAGCACCTaGACGGGCACCAGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: WEHQAAQGKGSVDFSTTTCPFST*TGTSKG
Trigger: CCCCTTGCTGGTGCCCGTCAAGGTGCTGAAGGGACA...GGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACATGTCCCTTCAGCACCTaGACGGGCACCAGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: GRLCWQPQFKKVGAPGSTCPFST*TGTSKG
Trigger: CCCCTTGCTGGTGCCCGTCAAGGTGCTGAAGGGACA...TGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp AGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGCACTCCAAGGGCACGTaGCCCACCGTGTTCCGGATG +
Preference number: 5 (lower is better)
Translates to: RRWEHQAAQGKGSVDFSTHSKGT*PTVFRM
Trigger: CATCCGGAACACGGTGGGCAACGTGCCCTTGGAGTG...CGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp TTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCAGGTACGTGCATCTaGTGGCGCCCGAGCACGGCG +
Preference number: 5 (lower is better)
Translates to: LLATPIQEGGSTRQHRVKAGTCI*WRPSTA
Trigger: CGCCGTGCTCGGGCGCCACAAGATGCACGTACCTGC...CTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp CCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACCCTGGCAGGGCCAGCTaGGGAGCAGGTACGTGCATC +
Preference number: 5 (lower is better)
Translates to: PNSRRWEHQAAQGKGSVDPGRAS*GAGTCI
Trigger: GATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAGG...GTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp CGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGCGCAGGCTCGGGAACTaGCGTGGCAAAAAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RLCWQPQFKKVGAPGSTGRRLGN*RGKKLS
Trigger: GCTGAGCTTTTTGCCACGCAAGTTCCCGAGCCTGCG...CCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp CCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTCTCGGCCGAGGCAGCTaGGGGATGAGGTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: PIQEGGSTRQHRVKALLTLGRGS*GMRSSG
Trigger: CCCTGAGGACCTCATCCCCAAGCTGCCTCGGCCGAG...AGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS TCA 90 bp AGGGGTTCTGCAGAAGGTCATTGTACACCATGCCATGGCAGACGATaGCACTGCCGTCGTCCGAGCCTGACGCAAAGAGTGGGTACCGCG +
Preference number: 5 (lower is better)
Translates to: RGSAEGHCTPCHGRR*HCRRPSLTQRVGTA
Trigger: CGCGGTACCCACTCTTTGCGTCAGGCTCGGACGACGGCAGTGTCATCGTCTGCCATGGCATGGTGTACAATGACCTTCTGCAGAACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS GCA 90 bp CCTCTCCCTCCTCGTCGCCTTCGTCATCATCCTCACTGCTGTCACTaGCGGAATCTTCCAGGCCTGAGAACACACTTTCCTCGCTGTCGG +
Preference number: 5 (lower is better)
Translates to: PLPPRRLRHHPHCCH*RNLPGLRTHFPRCR
Trigger: CCGACAGCGAGGAAAGTGTGTTCTCAGGCCTGGAAGATTCCGGCAGTGACAGCAGTGAGGATGATGACGAAGGCGACGAGGAGGGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000569669.6
ENST00000569712.1
ENST00000642409.2
ENST00000645213.1
CDS-3UTR CAA 90 bp GGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCAGTGGGGGCGGCTTTGTaGGCAACCCCAATTCAAGAA +
Preference number: 5 (lower is better)
Translates to: GGGFVGNPNSRRWEHQAAVGAAL*ATPIQE
Trigger: TTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCAC...TGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp TGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCACGACCACCGTGGTGGGGGCGGCTTaGTTGGCAACCCCAATTCAA +
Preference number: 5 (lower is better)
Translates to: WEHQAAQGKGSVDFSTTTVVGAA*LATPIQ
Trigger: TTGAATTGGGGTTGCCAACAAAGCCGCCCCCACCAC...GGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTATTGGGCATCAGCTTCTaGGTGAGCTCCTGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: ALLATPIQEGGSTRQHRVLGISF*VSSWRS
Trigger: GCTGCGCCAGGAGCTCACCAAGAAGCTGATGCCCAA...TACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp CCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTATTCAGGGGGTGGGTaGTACGACTCGGCGTGGCCT +
Preference number: 5 (lower is better)
Translates to: PNSRRWEHQAAQGKGSVDYSGGG*YDSAWP
Trigger: AGGCCACGCCGAGTCGTACAACCCACCCCCTGAATA...GTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTGTGGTGGGGGCGGCTTaGTTGGCAACCCCAATTCAA +
Preference number: 5 (lower is better)
Translates to: GFVGNPNSRRWEHQAAQGVVGAA*LATPIQ
Trigger: TTGAATTGGGGTTGCCAACAAAGCCGCCCCCACCAC...ACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS TCA 90 bp TTCGTCATCATCCTCACTGCTGTCACTGCCGGAATCTTCCAGGCCTaGGAACACACTTTCCTCGCTGTCGGAGACGCCAGAATCGCTGCC +
Preference number: 5 (lower is better)
Translates to: FVIILTAVTAGIFQA*EHTFLAVGDARIAA
Trigger: GGCAGCGATTCTGGCGTCTCCGACAGCGAGGAAAGTGTGTTCTCAGGCCTGGAAGATTCCGGCAGTGACAGCAGTGAGGATGATGACGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000569669.6
ENST00000569712.1
ENST00000642409.2
ENST00000645213.1
CDS-3UTR CAA 90 bp GGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTTCAGGATCGTCCATCTaGTCCAGGAACTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GFVGNPNSRRWEHQAAQGSGSSI*SRNWSS
Trigger: GCTGGACCAGTTCCTGGACAAGATGGACGATCCTGA...ACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTATGGATCCAGCCCATCTaGATGGCGTGCACCATGCGA +
Preference number: 5 (lower is better)
Translates to: ALLATPIQEGGSTRQHRVWIQPI*MACTMR
Trigger: TCGCATGGTGCACGCCATCAAGATGGGCTGGATCCA...TACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp AACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTCGCAGGCTCGGGAACTaGCGTGGCAAAAAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: NPNSRRWEHQAAQGKGSVRRLGN*RGKKLS
Trigger: GCTGAGCTTTTTGCCACGCAAGTTCCCGAGCCTGCG...AACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp TGGTGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCATCCTGTATGGCTaGGTGGAAAGATCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: WWGRLCWQPQFKKVGAPGSILYG*VERSRS
Trigger: TGACCTGGATCTTTCCACCAAGCCATACAGGATGCT...GCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp TTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCCCGCAGAGCCTTCTaGTGGTGTCTCAGCATCCTG +
Preference number: 5 (lower is better)
Translates to: LLATPIQEGGSTRQHRVKARRAF*WCLSIL
Trigger: CAGGATGCTGAGACACCACAAGAAGGCTCTGCGGGC...CTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp TGGGGGCGGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCTTCTGCAGAAGGTCATaGTACACCATGCCATGGCAG +
Preference number: 5 (lower is better)
Translates to: WGRLCWQPQFKKVGAPGSFCRRS*YTMPWQ
Trigger: CTGCCATGGCATGGTGTACAATGACCTTCTGCAGAA...GCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGAGGGTAAAGGCTCTGTaGACTTCAGCACGACCACCC +
Preference number: 5 (lower is better)
Translates to: ATPIQEGGSTRQHRVKALRVKAL*TSARPP
Trigger: GGGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCT...CAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGGTGGGGGCGGCTTTGTaGGCAACCCCAATTCAAGAA +
Preference number: 5 (lower is better)
Translates to: ATPIQEGGSTRQHRVKALVGAAL*ATPIQE
Trigger: TTCTTGAATTGGGGTTGCCAACAAAGCCGCCCCCAC...CAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS TCA 90 bp GATCCAGGTCAAACCACACCAGCTTGCTATCGTAGCTCCCACAGATaGCGTTGTCACCTAGGGCCAAAGGCTGTGATGCAGGTGTTCCCG +
Preference number: 5 (lower is better)
Translates to: DPGQTTPACYRSSHR*RCHLGPKAVMQVFP
Trigger: CGGGAACACCTGCATCACAGCCTTTGGCCCTAGGTGACAACGTCATCTGTGGGAGCTACGATAGCAAGCTGGTGTGGTTTGACCTGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568812.1
ENST00000647369.1
CDS-3UTR CAA 90 bp TTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTTCAGGATCGTCCATCTaGTCCAGGAACTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LATPIQEGGSTRQHRVKASGSSI*SRNWSS
Trigger: GCTGGACCAGTTCCTGGACAAGATGGACGATCCTGA...AGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp AACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTTGGATCCAGCCCATCTaGATGGCGTGCACCATGCGA +
Preference number: 5 (lower is better)
Translates to: NPNSRRWEHQAAQGKGSVWIQPI*MACTMR
Trigger: TCGCATGGTGCACGCCATCAAGATGGGCTGGATCCA...AACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp ATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCACTCCCACAGATGACGTaGTCACCTGCAGGGTGCACC +
Preference number: 5 (lower is better)
Translates to: IQEGGSTRQHRVKALLTSLPQMT*SPAGCT
Trigger: GGTGCACCCTGCAGGTGACAACGTCATCTGTGGGAG...TGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp TCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGCAGGGTAAAGGCTCTGTaGACTTCAGCACGACCACCC +
Preference number: 5 (lower is better)
Translates to: SRRWEHQAAQGKGSVDFSRVKAL*TSARPP
Trigger: GGGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCT...GCTGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp AATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAGGCTGGACACCCACTaGCAGTTGGGCATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: NSRRWEHQAAQGKGSVDFRLDTH*QLGISF
Trigger: GAAGCTGATGCCCAACTGCAAGTGGGTGTCCAGCCT...GAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp ATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAAAGGCTCTGTTGACTTCAAGGCTGGACACCCACTaGCAGTTGGGCATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: IQEGGSTRQHRVKALLTSRLDTH*QLGISF
Trigger: GAAGCTGATGCCCAACTGCAAGTGGGTGTCCAGCCT...TGAAGTCAACAGAGCCTTTACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GGCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTAGCATCCTGTATGGCTaGGTGGAAAGATCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: GFVGNPNSRRWEHQAAQGSILYG*VERSRS
Trigger: TGACCTGGATCTTTCCACCAAGCCATACAGGATGCT...ACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS-3UTR CAA 90 bp GCTTTGTTGGCAACCCCAATTCAAGAAGGTGGGAGCACCAGGCAGCACAGGGTATTCTGCAGAAGGTCATaGTACACCATGCCATGGCAG +
Preference number: 5 (lower is better)
Translates to: ALLATPIQEGGSTRQHRVFCRRS*YTMPWQ
Trigger: CTGCCATGGCATGGTGTACAATGACCTTCTGCAGAA...TACCCTGTGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp CGGGCAGGGTGGAAGGCCACTCGCTGCACCTGTCCGTaGCTGCGGCGGAACGGACTCTGGCTGCGGCGACGG +
Preference number: 6 (lower is better)
Translates to: RAGWKATRCTCP*LRRNGLWLRRR
Trigger: CCGTCGCCGCAGCCAGAGTCCGTTCCGCCGCAGCCACGGACAGGTGCAGCGAGTGGCCTTCCACCCTGCCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS CCA 72 bp GGCTTCCCGTGGCAGATGCGCAGCCGCAGGCCCACTTaGCGCTCCTCCTCTGAGGCCTCCAGCCAGCGGGCC +
Preference number: 6 (lower is better)
Translates to: GFPWQMRSRRPT*RSSSEASSQRA
Trigger: GGCCCGCTGGCTGGAGGCCTCAGAGGAGGAGCGCCAAGTGGGCCTGCGGCTGCGCATCTGCCACGGGAAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp ACCTTCCCGTGGCAGATGCGCAGCCGCAGGCCCACTTaGCGCTCCTCCTCTGAGGCCTCCAGCCAGCGGGCC +
Preference number: 6 (lower is better)
Translates to: TFPWQMRSRRPT*RSSSEASSQRA
Trigger: GGCCCGCTGGCTGGAGGCCTCAGAGGAGGAGCGCCAAGTGGGCCTGCGGCTGCGCATCTGCCACGGGAAGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568812.1
ENST00000647369.1
CDS CCA 72 bp CAGCCTCACCCCCAAGGCGCCCCACGTACCTTCCCGTaGCAGATGCGCAGCCGCAGGCCCACTTGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: QPHPQGAPRTFP*QMRSRRPTWRS
Trigger: GGAGCGCCAAGTGGGCCTGCGGCTGCGCATCTGCCACGGGAAGGTACGTGGGGCGCCTTGGGGGTGAGGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568812.1
ENST00000647369.1
CDS CAA 90 bp TCGGCGTGGCCTGGCAGGGCCAGCTTGGGAGCAGGTACGTGCATCTaGTGGCGCCCGAGCACGGCGTTGGGGTCCTCCTGGGCCCACAGG +
Preference number: 6 (lower is better)
Translates to: SAWPGRASLGAGTCI*WRPSTALGSSWAHR
Trigger: CCTGTGGGCCCAGGAGGACCCCAACGCCGTGCTCGGGCGCCACAAGATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAGGCCACGCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS TCA 72 bp GGGGGCTCCTCAGGCGGGACGAAGGCGCTCAACAGCTaGTCTGTGCTGCCCGCCACCAGCCGGTCCCCCAGA +
Preference number: 6 (lower is better)
Translates to: GGSSGGTKALNS*SVLPATSRSPR
Trigger: TCTGGGGGACCGGCTGGTGGCGGGCAGCACAGATCAGCTGTTGAGCGCCTTCGTCCCGCCTGAGGAGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS GCA 72 bp ACCCCCAAGGCGCCCCACGTACCTTCCCGTGGCAGATaGGCAGCCGCAGGCCCACTTGGCGCTCCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: TPKAPHVPSRGR*AAAGPLGAPPL
Trigger: CAGAGGAGGAGCGCCAAGTGGGCCTGCGGCTGCGCATCTGCCACGGGAAGGTACGTGGGGCGCCTTGGGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568812.1
ENST00000647369.1
CDS GCA 72 bp CAGGGTGGAAGGCCACTCGCTGCACCTGTCCGTGGCTaGGGCGGAACGGACTCTGGCTGCGGCGACGGCTCA +
Preference number: 6 (lower is better)
Translates to: QGGRPLAAPVRG*GGTDSGCGDGS
Trigger: TGAGCCGTCGCCGCAGCCAGAGTCCGTTCCGCCGCAGCCACGGACAGGTGCAGCGAGTGGCCTTCCACCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS GCA 72 bp GCGTGGCCTGGCAGGGCCAGCTTGGGAGCAGGTACGTaGATCTTGTGGCGCCCGAGCACGGCGTTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: AWPGRASLGAGT*ILWRPSTALGS
Trigger: GGACCCCAACGCCGTGCTCGGGCGCCACAAGATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAGGCCACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp GGGCGCTCGCCATCTCTGTCCTCGGGCAAGGAGTGCTaGCCTCCGGCTCGGGCTCAGGCTCCAGTTCGGGCT +
Preference number: 6 (lower is better)
Translates to: GRSPSLSSGKEC*PPARAQAPVRA
Trigger: AGCCCGAACTGGAGCCTGAGCCCGAGCCGGAGGCCAGCACTCCTTGCCCGAGGACAGAGATGGCGAGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569403.1
ENST00000647429.1
CDS CCA 72 bp GGTCCTCCTGGGCCCACAGGTCATAGAAGCTGGGGGTaGGGTCTCGGGGCCGGCGAGGCTGGATCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: GPPGPTGHRSWG*GLGAGEAGSSP
Trigger: TGGGCTGGATCCAGCCTCGCCGGCCCCGAGACCCCACCCCCAGCTTCTATGACCTGTGGGCCCAGGAGGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp GGCAGGGCCAGCTTGGGAGCAGGTACGTGCATCTTGTaGCGCCCGAGCACGGCGTTGGGGTCCTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: GRASLGAGTCIL*RPSTALGSSWA
Trigger: GGCCCAGGAGGACCCCAACGCCGTGCTCGGGCGCCACAAGATGCACGTACCTGCTCCCAAGCTGGCCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CAA 90 bp GCTGCGGCGACGGCTCAGCTGGTGAATCAGCACCTGGGTGTGGCCTaGGGTGGCCAGCACCACGGCCAGGTAGTCCCCACGCCCGTGCCA +
Preference number: 6 (lower is better)
Translates to: AAATAQLVNQHLGVA*GGQHHGQVVPTPVP
Trigger: TGGCACGGGCGTGGGGACTACCTGGCCGTGGTGCTGGCCACCCAAGGCCACACCCAGGTGCTGATTCACCAGCTGAGCCGTCGCCGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS GCA 72 bp CCTCAGGCGGGACGAAGGCGCTCAACAGCTGATCTGTaGTGCCCGCCACCAGCCGGTCCCCCAGAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: PQAGRRRSTADL*CPPPAGPPELG
Trigger: ACCCAGCTCTGGGGGACCGGCTGGTGGCGGGCAGCACAGATCAGCTGTTGAGCGCCTTCGTCCCGCCTGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS GCA 72 bp GCACCTGTCCGTGGCTGCGGCGGAACGGACTCTGGCTaGGGCGACGGCTCAGCTGGTGAATCAGCACCTGGG +
Preference number: 6 (lower is better)
Translates to: APVRGCGGTDSG*GDGSAGESAPG
Trigger: CCCAGGTGCTGATTCACCAGCTGAGCCGTCGCCGCAGCCAGAGTCCGTTCCGCCGCAGCCACGGACAGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS GCA 72 bp AACAGGAAGGGCCGGGCAGGGTGGAAGGCCACTCGCTaGACCTGTCCGTGGCTGCGGCGGAACGGACTCTGG +
Preference number: 6 (lower is better)
Translates to: NRKGRAGWKATR*TCPWLRRNGLW
Trigger: CCAGAGTCCGTTCCGCCGCAGCCACGGACAGGTGCAGCGAGTGGCCTTCCACCCTGCCCGGCCCTTCCTGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS GCA 72 bp GCCAGGTCACCTGCGTCACTGGCTTCCCGTGGCAGATaGGCAGCCGCAGGCCCACTTGGCGCTCCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: ARSPASLASRGR*AAAGPLGAPPL
Trigger: CAGAGGAGGAGCGCCAAGTGGGCCTGCGGCTGCGCATCTGCCACGGGAAGCCAGTGACGCAGGTGACCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CAA 72 bp CCTGGCAGGGCCAGCTTGGGAGCAGGTACGTGCATCTaGTGGCGCCCGAGCACGGCGTTGGGGTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: PGRASLGAGTCI*WRPSTALGSSW
Trigger: CCAGGAGGACCCCAACGCCGTGCTCGGGCGCCACAAGATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CAA 90 bp TCAGGGGGTGGGTTGTACGACTCGGCGTGGCCTGGCAGGGCCAGCTaGGGAGCAGGTACGTGCATCTTGTGGCGCCCGAGCACGGCGTTG +
Preference number: 6 (lower is better)
Translates to: SGGGLYDSAWPGRAS*GAGTCILWRPSTAL
Trigger: CAACGCCGTGCTCGGGCGCCACAAGATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAGGCCACGCCGAGTCGTACAACCCACCCCCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS TCA 72 bp CGGAACGGACTCTGGCTGCGGCGACGGCTCAGCTGGTaGATCAGCACCTGGGTGTGGCCTTGGGTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: RNGLWLRRRLSW*ISTWVWPWVAS
Trigger: GCTGGCCACCCAAGGCCACACCCAGGTGCTGATTCACCAGCTGAGCCGTCGCCGCAGCCAGAGTCCGTTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS GCA 72 bp CAGGCGGGACGAAGGCGCTCAACAGCTGATCTGTGCTaGCCGCCACCAGCCGGTCCCCCAGAGCTGGGTTCA +
Preference number: 6 (lower is better)
Translates to: QAGRRRSTADLC*PPPAGPPELGS
Trigger: TGAACCCAGCTCTGGGGGACCGGCTGGTGGCGGGCAGCACAGATCAGCTGTTGAGCGCCTTCGTCCCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS CAA 72 bp GGGTTGTACGACTCGGCGTGGCCTGGCAGGGCCAGCTaGGGAGCAGGTACGTGCATCTTGTGGCGCCCGAGC +
Preference number: 6 (lower is better)
Translates to: GLYDSAWPGRAS*GAGTCILWRPS
Trigger: GCTCGGGCGCCACAAGATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAGGCCACGCCGAGTCGTACAACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CAA 90 bp CACGCCAAGCGCTCCTCCTCGCTGAGCAGGTATTCAGGGGGTGGGTaGTACGACTCGGCGTGGCCTGGCAGGGCCAGCTTGGGAGCAGGT +
Preference number: 6 (lower is better)
Translates to: HAKRSSSLSRYSGGG*YDSAWPGRASLGAG
Trigger: ACCTGCTCCCAAGCTGGCCCTGCCAGGCCACGCCGAGTCGTACAACCCACCCCCTGAATACCTGCTCAGCGAGGAGGAGCGCTTGGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS TCA 72 bp GGTACAGGTCAAGGCAGCGCTCGAAGCGTTCCTGGATaGAGCGTCCGTAGGCAGGCACGGCCCGCAGGCTCG +
Preference number: 6 (lower is better)
Translates to: GTGQGSARSVPG*SVRRQARPAGS
Trigger: CGAGCCTGCGGGCCGTGCCTGCCTACGGACGCTTCATCCAGGAACGCTTCGAGCGCTGCCTTGACCTGTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS GCA 72 bp CACCGTGTTCCGGATGTCATTCCTGGTTGCAGCCCCTaGCAGCCGCCACCCTCGCTCCTTCCAGCCTGGGGA +
Preference number: 6 (lower is better)
Translates to: HRVPDVIPGCSP*QPPPSLLPAWG
Trigger: TCCCCAGGCTGGAAGGAGCGAGGGTGGCGGCTGGCAGGGGCTGCAACCAGGAATGACATCCGGAACACGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563210.1
ENST00000647182.1
CDS GCA 72 bp AACTGGCCACTCTGCAGCCGCCGCACCAGGGCCACCTaGTCATCCGTCAGTCTCAGGTCCCGCCCTGTCATC +
Preference number: 6 (lower is better)
Translates to: NWPLCSRRTRAT*SSVSLRSRPVI
Trigger: GATGACAGGGCGGGACCTGAGACTGACGGATGAGCAGGTGGCCCTGGTGCGGCGGCTGCAGAGTGGCCAGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000569160.1
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000644494.1
ENST00000647429.1
CDS GCA 72 bp AGGGGGTTGCAGGGGGAGTGCAGGCCCAGCCTCAAGTaGCCTGAGGTCACTGGCCCTGACCTACGCCTGTTC +
Preference number: 6 (lower is better)
Translates to: RGLQGECRPSLK*PEVTGPDLRLF
Trigger: GAACAGGCGTAGGTCAGGGCCAGTGACCTCAGGGCACTTGAGGCTGGGCCTGCACTCCCCCTGCAACCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569160.1
ENST00000644494.1
CDS GCA 72 bp CGTGGGGGAAGTCATCGTACCACTCCAAGGGCACGTTaGCCACCGTGTTCCGGATGTCCTGCAGCCGGGGGC +
Preference number: 6 (lower is better)
Translates to: RGGSHRTTPRAR*PPCSGCPAAGG
Trigger: GCCCCCGGCTGCAGGACATCCGGAACACGGTGGGCAACGTGCCCTTGGAGTGGTACGATGACTTCCCCCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000569160.1
ENST00000644494.1
CDS CCA 72 bp CAAGCGCTCCTCCTCGCTGAGCAGGTATTCAGGGGGTaGGTTGTACGACTCGGCGTGGCCTGGCAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: QALLLAEQVFRG*VVRLGVAWQGQ
Trigger: CTGGCCCTGCCAGGCCACGCCGAGTCGTACAACCCACCCCCTGAATACCTGCTCAGCGAGGAGGAGCGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CAA 72 bp ACGGCTCAGCTGGTGAATCAGCACCTGGGTGTGGCCTaGGGTGGCCAGCACCACGGCCAGGTAGTCCCCACG +
Preference number: 6 (lower is better)
Translates to: TAQLVNQHLGVA*GGQHHGQVVPT
Trigger: CGTGGGGACTACCTGGCCGTGGTGCTGGCCACCCAAGGCCACACCCAGGTGCTGATTCACCAGCTGAGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000568812.1
ENST00000569669.6
ENST00000642409.2
ENST00000647369.1
CDS CAA 72 bp AGGGAGGGGATGAAGCTGCGCTTGTCGGCCGGGCGGTaGGTCACCGGGTGGATCATGACGTCCCCGCTGAAG +
Preference number: 6 (lower is better)
Translates to: REGMKLRLSAGR*VTGWIMTSPLK
Trigger: CTTCAGCGGGGACGTCATGATCCACCCGGTGACCAACCGCCCGGCCGACAAGCGCAGCTTCATCCCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000647429.1
CDS CAA 72 bp CGCTCCTCCTCGCTGAGCAGGTATTCAGGGGGTGGGTaGTACGACTCGGCGTGGCCTGGCAGGGCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: RSSSLSRYSGGG*YDSAWPGRASL
Trigger: CAAGCTGGCCCTGCCAGGCCACGCCGAGTCGTACAACCCACCCCCTGAATACCTGCTCAGCGAGGAGGAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CAA 90 bp CGAGAGACCTTCTCCTTCTCCACCAGGGAGGGGATGAAGCTGCGCTaGTCGGCCGGGCGGTTGGTCACCGGGTGGATCATGACGTCCCCG +
Preference number: 6 (lower is better)
Translates to: RETFSFSTREGMKLR*SAGRLVTGWIMTSP
Trigger: CGGGGACGTCATGATCCACCCGGTGACCAACCGCCCGGCCGACAAGCGCAGCTTCATCCCCTCCCTGGTGGAGAAGGAGAAGGTCTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000647429.1
CDS TCA 72 bp GCCATGGCAGACGATGACACTGCCGTCGTCCGAGCCTaGCGCAAAGAGTGGGTACCGCGGGTGGAAGGCCAC +
Preference number: 6 (lower is better)
Translates to: AMADDDTAVVRA*RKEWVPRVEGH
Trigger: GTGGCCTTCCACCCGCGGTACCCACTCTTTGCGTCAGGCTCGGACGACGGCAGTGTCATCGTCTGCCATGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS GCA 72 bp GCTCATCCCGGGTCCGCAGGGGCTTGTAGATGCGCCTaGCATCCAGGTCGTAGCCCACGTGGGGGAAGTCAT +
Preference number: 6 (lower is better)
Translates to: AHPGSAGACRCA*HPGRSPRGGSH
Trigger: ATGACTTCCCCCACGTGGGCTACGACCTGGATGGCAGGCGCATCTACAAGCCCCTGCGGACCCGGGATGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000563210.1
ENST00000569160.1
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000644494.1
ENST00000647182.1
ENST00000647429.1
CDS GCA 72 bp GCCAAAGGCTGTGATGCAGGTGTTCCCGCTCTCACCTaGAGGGTGCACTGCCCTGCCCGTCACCTACACCCC +
Preference number: 6 (lower is better)
Translates to: AKGCDAGVPALT*RVHCPARHLHP
Trigger: GGGGTGTAGGTGACGGGCAGGGCAGTGCACCCTGCAGGTGAGAGCGGGAACACCTGCATCACAGCCTTTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568812.1
ENST00000647369.1
CDS GCA 72 bp GTCCGTAGGCAGGCACGGCCCGCAGGCTCGGGAACTTaGGTGGCAAAAAGCTCAGCTTCCTCTCGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: VRRQARPAGSGT*VAKSSASSRLA
Trigger: AGCCAGGCGAGAGGAAGCTGAGCTTTTTGCCACGCAAGTTCCCGAGCCTGCGGGCCGTGCCTGCCTACGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp AAGCTGCGCTTGTCGGCCGGGCGGTTGGTCACCGGGTaGATCATGACGTCCCCGCTGAAGAAGTCGACAGCC +
Preference number: 6 (lower is better)
Translates to: KLRLSAGRLVTG*IMTSPLKKSTA
Trigger: GGCTGTCGACTTCTTCAGCGGGGACGTCATGATCCACCCGGTGACCAACCGCCCGGCCGACAAGCGCAGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000647429.1
CDS CCA 72 bp CAGGTACGTGCATCTTGTGGCGCCCGAGCACGGCGTTaGGGTCCTCCTGGGCCCACAGGTCATAGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: QVRASCGARARR*GPPGPTGHRSW
Trigger: CCAGCTTCTATGACCTGTGGGCCCAGGAGGACCCCAACGCCGTGCTCGGGCGCCACAAGATGCACGTACCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp AGCAGGTATTCAGGGGGTGGGTTGTACGACTCGGCGTaGCCTGGCAGGGCCAGCTTGGGAGCAGGTACGTGC +
Preference number: 6 (lower is better)
Translates to: SRYSGGGLYDSA*PGRASLGAGTC
Trigger: GCACGTACCTGCTCCCAAGCTGGCCCTGCCAGGCCACGCCGAGTCGTACAACCCACCCCCTGAATACCTGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp GTAGGCAGGCACGGCCCGCAGGCTCGGGAACTTGCGTaGCAAAAAGCTCAGCTTCCTCTCGCCTGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: VGRHGPQARELA*QKAQLPLAWLL
Trigger: CAGGAGCCAGGCGAGAGGAAGCTGAGCTTTTTGCCACGCAAGTTCCCGAGCCTGCGGGCCGTGCCTGCCTAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp ACAGTCCCGTCTGCCCCCGAGGAGAAGACCCACGGCTaGGTGGGGTGGAAGATGACGTCCAGCACTCCCAGA +
Preference number: 6 (lower is better)
Translates to: TVPSAPEEKTHG*VGWKMTSSTPR
Trigger: TCTGGGAGTGCTGGACGTCATCTTCCACCCCACCCAGCCGTGGGTCTTCTCCTCGGGGGCAGACGGGACTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CAA 72 bp GGGTCTCGGGGCCGGCGAGGCTGGATCCAGCCCATCTaGATGGCGTGCACCATGCGAGAGACCTTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: GSRGRRGWIQPI*MACTMRETFSF
Trigger: GAAGGAGAAGGTCTCTCGCATGGTGCACGCCATCAAGATGGGCTGGATCCAGCCTCGCCGGCCCCGAGACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000647429.1
CDS CAA 72 bp ACGTGGGGGAAGTCATCGTACCACTCCAAGGGCACGTaGCCCACCGTGTTCCGGATGTCCTGCAGCCGGGGG +
Preference number: 6 (lower is better)
Translates to: TWGKSSYHSKGT*PTVFRMSCSRG
Trigger: CCCCCGGCTGCAGGACATCCGGAACACGGTGGGCAACGTGCCCTTGGAGTGGTACGATGACTTCCCCCACGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569160.1
ENST00000644494.1
CDS TCA 72 bp GGTCTCGGGGCCGGCGAGGCTGGATCCAGCCCATCTTaGTGGCGTGCACCATGCGAGAGACCTTCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: GLGAGEAGSSPS*WRAPCERPSPS
Trigger: AGAAGGAGAAGGTCTCTCGCATGGTGCACGCCATCAAGATGGGCTGGATCCAGCCTCGCCGGCCCCGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000647429.1
CDS TCA 72 bp CCGAGGAGAAGACCCACGGCTGGGTGGGGTGGAAGATaGCGTCCAGCACTCCCAGATCTCGGGTCAGCACGT +
Preference number: 6 (lower is better)
Translates to: PRRRPTAGWGGR*RPALPDLGSAR
Trigger: ACGTGCTGACCCGAGATCTGGGAGTGCTGGACGTCATCTTCCACCCCACCCAGCCGTGGGTCTTCTCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS GCA 72 bp CGTGGCAAAAAGCTCAGCTTCCTCTCGCCTGGCTCCTaGTGTTCCCACGCCAAGCGCTCCTCCTCGCTGAGC +
Preference number: 6 (lower is better)
Translates to: RGKKLSFLSPGS*CSHAKRSSSLS
Trigger: GCTCAGCGAGGAGGAGCGCTTGGCGTGGGAACAGCAGGAGCCAGGCGAGAGGAAGCTGAGCTTTTTGCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp TCGTCCGAGCCTGACGCAAAGAGTGGGTACCGCGGGTaGAAGGCCACAGCCCGCAGAGCCTTCTTGTGGTGT +
Preference number: 6 (lower is better)
Translates to: SSEPDAKSGYRG*KATARRAFLWC
Trigger: ACACCACAAGAAGGCTCTGCGGGCTGTGGCCTTCCACCCGCGGTACCCACTCTTTGCGTCAGGCTCGGACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CAA 90 bp TTCTCCACCAGGGAGGGGATGAAGCTGCGCTTGTCGGCCGGGCGGTaGGTCACCGGGTGGATCATGACGTCCCCGCTGAAGAAGTCGACA +
Preference number: 6 (lower is better)
Translates to: FSTREGMKLRLSAGR*VTGWIMTSPLKKST
Trigger: TGTCGACTTCTTCAGCGGGGACGTCATGATCCACCCGGTGACCAACCGCCCGGCCGACAAGCGCAGCTTCATCCCCTCCCTGGTGGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000647429.1
CDS TCA 72 bp AGGGCTGCAGGTCCCTCGGCCGAGGCAGCTTGGGGATaGGGTCCTCAGGGTCTACATTCACCCTCATCTTGC +
Preference number: 6 (lower is better)
Translates to: RAAGPSAEAAWG*GPQGLHSPSSC
Trigger: GCAAGATGAGGGTGAATGTAGACCCTGAGGACCTCATCCCCAAGCTGCCTCGGCCGAGGGACCTGCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS TCA 72 bp AGCCTGAAACCAGCCACTGGCCCCCAGGAGAGACACTaGGGCACCGGACAAGGTCACTGTGGCCCCTGTAGA +
Preference number: 6 (lower is better)
Translates to: SLKPATGPQERH*GTGQGHCGPCR
Trigger: TCTACAGGGGCCACAGTGACCTTGTCCGGTGCCTCAGTGTCTCTCCTGGGGGCCAGTGGCTGGTTTCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp GTATTCAGGGGGTGGGTTGTACGACTCGGCGTGGCCTaGCAGGGCCAGCTTGGGAGCAGGTACGTGCATCTT +
Preference number: 6 (lower is better)
Translates to: VFRGWVVRLGVA*QGQLGSRYVHL
Trigger: AAGATGCACGTACCTGCTCCCAAGCTGGCCCTGCCAGGCCACGCCGAGTCGTACAACCCACCCCCTGAATAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS GCA 72 bp CGTGGGGGAAGTCATCGTACCACTCCAAGGGCACGTTaGCCACCGTGTTCCGGATGTCCTCCTCATCAGAGC +
Preference number: 6 (lower is better)
Translates to: RGGSHRTTPRAR*PPCSGCPPHQS
Trigger: GCTCTGATGAGGAGGACATCCGGAACACGGTGGGCAACGTGCCCTTGGAGTGGTACGATGACTTCCCCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000647429.1
CDS GCA 72 bp AGGTCCTCAGGGTCTACATTCACCCTCATCTTGCGCTaGCGTGGGCACAGGTACAGGTCAAGGCAGCGCTCG +
Preference number: 6 (lower is better)
Translates to: RSSGSTFTLILR*RGHRYRSRQRS
Trigger: CGAGCGCTGCCTTGACCTGTACCTGTGCCCACGGCAGCGCAAGATGAGGGTGAATGTAGACCCTGAGGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp GAACTTGCGTGGCAAAAAGCTCAGCTTCCTCTCGCCTaGCTCCTGCTGTTCCCACGCCAAGCGCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: ELAWQKAQLPLA*LLLFPRQALLL
Trigger: GAGGAGGAGCGCTTGGCGTGGGAACAGCAGGAGCCAGGCGAGAGGAAGCTGAGCTTTTTGCCACGCAAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp CTCAGGGTCTACATTCACCCTCATCTTGCGCTGCCGTaGGCACAGGTACAGGTCAAGGCAGCGCTCGAAGCG +
Preference number: 6 (lower is better)
Translates to: LRVYIHPHLALP*AQVQVKAALEA
Trigger: CGCTTCGAGCGCTGCCTTGACCTGTACCTGTGCCCACGGCAGCGCAAGATGAGGGTGAATGTAGACCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS GCA 72 bp CGTGGGGGAAGTCATCGTACCACTCCAAGGGCACGTTaGCCACCGTGTTCCGGATGTCATTCCTGGTTGCAG +
Preference number: 6 (lower is better)
Translates to: RGGSHRTTPRAR*PPCSGCHSWLQ
Trigger: CTGCAACCAGGAATGACATCCGGAACACGGTGGGCAACGTGCCCTTGGAGTGGTACGATGACTTCCCCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563210.1
ENST00000647182.1
CDS CAA 72 bp ACGTGGGGGAAGTCATCGTACCACTCCAAGGGCACGTaGCCCACCGTGTTCCGGATGTCCTCCTCATCAGAG +
Preference number: 6 (lower is better)
Translates to: TWGKSSYHSKGT*PTVFRMSSSSE
Trigger: CTCTGATGAGGAGGACATCCGGAACACGGTGGGCAACGTGCCCTTGGAGTGGTACGATGACTTCCCCCACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000569403.1
ENST00000569669.6
ENST00000642409.2
ENST00000647429.1
CDS CAA 90 bp TCCAGCACTCCCAGATCTCGGGTCAGCACGTGTCCCTTCAGCACCTaGACGGGCACCAGCAAGGGGTTCTGCAGAAGGTCATTGTACACC +
Preference number: 6 (lower is better)
Translates to: SSTPRSRVSTCPFST*TGTSKGFCRRSLYT
Trigger: GGTGTACAATGACCTTCTGCAGAACCCCTTGCTGGTGCCCGTCAAGGTGCTGAAGGGACACGTGCTGACCCGAGATCTGGGAGTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS GCA 72 bp CCCTTCAGCACCTTGACGGGCACCAGCAAGGGGTTCTaGAGAAGGTCATTGTACACCATGCCATGGCAGACG +
Preference number: 6 (lower is better)
Translates to: PFSTLTGTSKGF*RRSLYTMPWQT
Trigger: CGTCTGCCATGGCATGGTGTACAATGACCTTCTGCAGAACCCCTTGCTGGTGCCCGTCAAGGTGCTGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp TGCACCTGCTCCTCAGTGGTCTTTTTAATCCCACTGTaGCCCTCGTCATCAAGGGCTCCGTCCTCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: CTCSSVVFLIPL*PSSSRAPSSPS
Trigger: GGAGGGAGAGGACGGAGCCCTTGATGACGAGGGCCACAGTGGGATTAAAAAGACCACTGAGGAGCAGGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000569669.6
ENST00000569712.1
ENST00000642409.2
ENST00000645213.1
CDS CAA 72 bp ACGTGGGGGAAGTCATCGTACCACTCCAAGGGCACGTaGCCCACCGTGTTCCGGATGTCATTCCTGGTTGCA +
Preference number: 6 (lower is better)
Translates to: TWGKSSYHSKGT*PTVFRMSFLVA
Trigger: TGCAACCAGGAATGACATCCGGAACACGGTGGGCAACGTGCCCTTGGAGTGGTACGATGACTTCCCCCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563210.1
ENST00000647182.1
CDS TCA 72 bp ATCCTCACTGCTGTCACTGCCGGAATCTTCCAGGCCTaGGAACACACTTTCCTCGCTGTCGGAGACGCCAGA +
Preference number: 6 (lower is better)
Translates to: ILTAVTAGIFQA*EHTFLAVGDAR
Trigger: TCTGGCGTCTCCGACAGCGAGGAAAGTGTGTTCTCAGGCCTGGAAGATTCCGGCAGTGACAGCAGTGAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000569669.6
ENST00000569712.1
ENST00000642409.2
ENST00000645213.1
CDS TCA 72 bp GCAGAAGGTCATTGTACACCATGCCATGGCAGACGATaGCACTGCCGTCGTCCGAGCCTGACGCAAAGAGTG +
Preference number: 6 (lower is better)
Translates to: AEGHCTPCHGRR*HCRRPSLTQRV
Trigger: CACTCTTTGCGTCAGGCTCGGACGACGGCAGTGTCATCGTCTGCCATGGCATGGTGTACAATGACCTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp AAGGGGTTCTGCAGAAGGTCATTGTACACCATGCCATaGCAGACGATGACACTGCCGTCGTCCGAGCCTGAC +
Preference number: 6 (lower is better)
Translates to: KGFCRRSLYTMP*QTMTLPSSEPD
Trigger: GTCAGGCTCGGACGACGGCAGTGTCATCGTCTGCCATGGCATGGTGTACAATGACCTTCTGCAGAACCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS GCA 72 bp CCTCGTCGCCTTCGTCATCATCCTCACTGCTGTCACTaGCGGAATCTTCCAGGCCTGAGAACACACTTTCCT +
Preference number: 6 (lower is better)
Translates to: PRRLRHHPHCCH*RNLPGLRTHFP
Trigger: AGGAAAGTGTGTTCTCAGGCCTGGAAGATTCCGGCAGTGACAGCAGTGAGGATGATGACGAAGGCGACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000569669.6
ENST00000569712.1
ENST00000642409.2
ENST00000645213.1
CDS TCA 72 bp CAAACCACACCAGCTTGCTATCGTAGCTCCCACAGATaGCGTTGTCACCTAGGGCCAAAGGCTGTGATGCAG +
Preference number: 6 (lower is better)
Translates to: QTTPACYRSSHR*RCHLGPKAVMQ
Trigger: CTGCATCACAGCCTTTGGCCCTAGGTGACAACGTCATCTGTGGGAGCTACGATAGCAAGCTGGTGTGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568812.1
ENST00000647369.1
CDS CCA 72 bp CCGCAGAGCCTTCTTGTGGTGTCTCAGCATCCTGTATaGCTTGGTGGAAAGATCCAGGTCAAACCACACCAG +
Preference number: 6 (lower is better)
Translates to: PQSLLVVSQHPV*LGGKIQVKPHQ
Trigger: CTGGTGTGGTTTGACCTGGATCTTTCCACCAAGCCATACAGGATGCTGAGACACCACAAGAAGGCTCTGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp GAGCCTTCTTGTGGTGTCTCAGCATCCTGTATGGCTTaGTGGAAAGATCCAGGTCAAACCACACCAGCTTGC +
Preference number: 6 (lower is better)
Translates to: EPSCGVSASCMA*WKDPGQTTPAC
Trigger: GCAAGCTGGTGTGGTTTGACCTGGATCTTTCCACCAAGCCATACAGGATGCTGAGACACCACAAGAAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CAA 72 bp AGAGCCTTCTTGTGGTGTCTCAGCATCCTGTATGGCTaGGTGGAAAGATCCAGGTCAAACCACACCAGCTTG +
Preference number: 6 (lower is better)
Translates to: RAFLWCLSILYG*VERSRSNHTSL
Trigger: CAAGCTGGTGTGGTTTGACCTGGATCTTTCCACCAAGCCATACAGGATGCTGAGACACCACAAGAAGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2
CDS CCA 72 bp CCTTCTTGTGGTGTCTCAGCATCCTGTATGGCTTGGTaGAAAGATCCAGGTCAAACCACACCAGCTTGCTAT +
Preference number: 6 (lower is better)
Translates to: PSCGVSASCMAW*KDPGQTTPACY
Trigger: ATAGCAAGCTGGTGTGGTTTGACCTGGATCTTTCCACCAAGCCATACAGGATGCTGAGACACCACAAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569669.6
ENST00000642409.2