Pregenerated sensors for BOLA3-AS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000225439Ensembl transcript IDs: ENST00000423477.2, ENST00000529783.1, ENST00000533563.2, ENST00000655044.1, ENST00000656407.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CATGGTCCATGGCTCCAACCTGGGCCTCTGTTAGGCTGTGTCCTGTaGCACCTGGACCATCGCGGTAGCCTCGGAGCTTCTGACTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: HGPWLQPGPLLGCVL*HLDHRGSLGASDCV Trigger: GACACAGTCAGAAGCTCCGAGGCTACCGCGATGGTCCAGGTGCCACAGGACACAGCCTAACAGAGGCCCAGGTTGGAGCCATGGACCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 |
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| CDS GCA 90 bp | GTTGGCAAAAAGCTGGTAAATCCTGCAGGGTGCCACCAGACCGCGTaGTGGACCATCGCGGTAGCCTCGGAGCTTCTGACTGTGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: VGKKLVNPAGCHQTA*WTIAVASELLTVSL Trigger: CAGAGACACAGTCAGAAGCTCCGAGGCTACCGCGATGGTCCAGCACGCGGTCTGGTGGCACCCTGCAGGATTTACCAGCTTTTTGCCAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529783.1 |
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| CDS CCA 90 bp | GGCAAAAAGCTGGTAAATCCTGCAGGGTGCCACCAGACCGCGTGCTaGACCATCGCGGTAGCCTCGGAGCTTCTGACTGTGTCTCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: GKKLVNPAGCHQTAC*TIAVASELLTVSLV Trigger: AACCAGAGACACAGTCAGAAGCTCCGAGGCTACCGCGATGGTCCAGCACGCGGTCTGGTGGCACCCTGCAGGATTTACCAGCTTTTTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529783.1 |
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| CDS TCA 90 bp | GGGAAGGCCAGTATAGGGCGCCGAGACCTTGGAGTGTTTCTGAGCTaGGGAGGAATGAGACTTTCACGCGGGCAAGGGGACCCTATCCAT | + |
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Preference number: 5 (lower is better) Translates to: GKASIGRRDLGVFLS*GGMRLSRGQGDPIH Trigger: ATGGATAGGGTCCCCTTGCCCGCGTGAAAGTCTCATTCCTCCTCAGCTCAGAAACACTCCAAGGTCTCGGCGCCCTATACTGGCCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000423477.2 ENST00000529783.1 ENST00000655044.1 |
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| CDS GCA 90 bp | TGCATAGGCCAGAATGTTGGCAAAAAGCTGGTAAATCCTGCAGGGTaGCACCAGACCGCGTGCTGGACCATCGCGGTAGCCTCGGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: CIGQNVGKKLVNPAG*HQTACWTIAVASEL Trigger: AAGCTCCGAGGCTACCGCGATGGTCCAGCACGCGGTCTGGTGGCACCCTGCAGGATTTACCAGCTTTTTGCCAACATTCTGGCCTATGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529783.1 |
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| CDS CCA 90 bp | CCCATCCCACATGGCGTCAGCTTCCCTTCCATTCTCATGACTCCATaGTCCATGGCTCCAACCTGGGCCTCTGTTAGGCTGTGTCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: PIPHGVSFPSILMTP*SMAPTWASVRLCPV Trigger: CACAGGACACAGCCTAACAGAGGCCCAGGTTGGAGCCATGGACCATGGAGTCATGAGAATGGAAGGGAAGCTGACGCCATGTGGGATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 |
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| CDS CCA 90 bp | CCCATCCCACATGGCGTCAGCTTCCCTTCCATTCTCATGACTCCATaGTCCATGGCTCCAACCTGGGCCTCTGTTAGGCTGTGTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PIPHGVSFPSILMTP*SMAPTWASVRLCPG Trigger: TCCAGGACACAGCCTAACAGAGGCCCAGGTTGGAGCCATGGACCATGGAGTCATGAGAATGGAAGGGAAGCTGACGCCATGTGGGATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656407.1 |
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| CDS GCA 90 bp | ATTTCGGCCTTGACTGGTCTGAAGACTCCAGAGGCGGGACGAATTTaGGGACAGTTCTACCCCATCCCACATGGCGTCAGCTTCCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: ISALTGLKTPEAGRI*GQFYPIPHGVSFPS Trigger: GGAAGGGAAGCTGACGCCATGTGGGATGGGGTAGAACTGTCCGCAAATTCGTCCCGCCTCTGGAGTCTTCAGACCAGTCAAGGCCGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS CCA 90 bp | AGGGGTATTCGGATGAGGGAAGGCCAGTATAGGGCGCCGAGACCTTaGAGTGTTTCTGAGCTGAGGAGGAATGAGACTTTCACGCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: RGIRMREGQYRAPRP*SVSELRRNETFTRA Trigger: TGCCCGCGTGAAAGTCTCATTCCTCCTCAGCTCAGAAACACTCCAAGGTCTCGGCGCCCTATACTGGCCTTCCCTCATCCGAATACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000423477.2 ENST00000529783.1 ENST00000655044.1 |
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| CDS CCA 90 bp | TCCAGAGGCGGGACGAATTTGCGGACAGTTCTACCCCATCCCACATaGCGTCAGCTTCCCTTCCATTCTCATGACTCCATGGTCCATGGC | + |
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Preference number: 5 (lower is better) Translates to: SRGGTNLRTVLPHPT*RQLPFHSHDSMVHG Trigger: GCCATGGACCATGGAGTCATGAGAATGGAAGGGAAGCTGACGCCATGTGGGATGGGGTAGAACTGTCCGCAAATTCGTCCCGCCTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS TCA 90 bp | AGTTCTACCCCATCCCACATGGCGTCAGCTTCCCTTCCATTCTCATaGCTCCATGGTCCATGGCTCCAACCTGGGCCTCTGTTAGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SSTPSHMASASLPFS*LHGPWLQPGPLLGC Trigger: ACAGCCTAACAGAGGCCCAGGTTGGAGCCATGGACCATGGAGTCATGAGAATGGAAGGGAAGCTGACGCCATGTGGGATGGGGTAGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS TCA 90 bp | ATCAAATCCTTCCACGAGTCCCCGCACCTTGGAGTGTTTCTGAGCTaGGGAGGAATGAGACTTTCACGCGGGCAAGGGGACCCTATCCAT | + |
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Preference number: 5 (lower is better) Translates to: IKSFHESPHLGVFLS*GGMRLSRGQGDPIH Trigger: ATGGATAGGGTCCCCTTGCCCGCGTGAAAGTCTCATTCCTCCTCAGCTCAGAAACACTCCAAGGTGCGGGGACTCGTGGAAGGATTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000533563.2 ENST00000656407.1 |
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| CDS CCA 90 bp | TCTTTCTCAAGCGCGAATCAAATCCTTCCACGAGTCCCCGCACCTTaGAGTGTTTCTGAGCTGAGGAGGAATGAGACTTTCACGCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: SFSSANQILPRVPAP*SVSELRRNETFTRA Trigger: TGCCCGCGTGAAAGTCTCATTCCTCCTCAGCTCAGAAACACTCCAAGGTGCGGGGACTCGTGGAAGGATTTGATTCGCGCTTGAGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000533563.2 ENST00000656407.1 |
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| CDS GCA 90 bp | GTTGGCAAAAAGCTGGTAAATCCTGCAGGGTGCCACCAGACCGCGTaGTGCAAACAAATAACAGCTAGAGAGAGGAGAGGCTTGGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: VGKKLVNPAGCHQTA*CKQITARERRGLVE Trigger: TTCAACCAAGCCTCTCCTCTCTCTAGCTGTTATTTGTTTGCAGCACGCGGTCTGGTGGCACCCTGCAGGATTTACCAGCTTTTTGCCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS GCA 90 bp | TGCATAGGCCAGAATGTTGGCAAAAAGCTGGTAAATCCTGCAGGGTaGCACCAGACCGCGTGCTGCAAACAAATAACAGCTAGAGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: CIGQNVGKKLVNPAG*HQTACCKQITARER Trigger: CCTCTCTCTAGCTGTTATTTGTTTGCAGCACGCGGTCTGGTGGCACCCTGCAGGATTTACCAGCTTTTTGCCAACATTCTGGCCTATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS GCA 90 bp | GGAAGGAGGAAGGGGGCAAGGGTTGAAACTACCTATTGGGTACTATaGTCATTACCTGAAGGACGGATTCGTTCATACTCCAAACCTCAG | + |
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Preference number: 5 (lower is better) Translates to: GRRKGARVETTYWVL*SLPEGRIRSYSKPQ Trigger: CTGAGGTTTGGAGTATGAACGAATCCGTCCTTCAGGTAATGAGCATAGTACCCAATAGGTAGTTTCAACCCTTGCCCCCTTCCTCCTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS GCA 90 bp | ATAGGTCCAATCCATCCAAGTGCAACGCTGAAGGGACGTATTGATTaGATAGGCCAGAATGTTGGCAAAAAGCTGGTAAATCCTGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: IGPIHPSATLKGRID*IGQNVGKKLVNPAG Trigger: CCCTGCAGGATTTACCAGCTTTTTGCCAACATTCTGGCCTATGCAATCAATACGTCCCTTCAGCGTTGCACTTGGATGGATTGGACCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000423477.2 ENST00000529783.1 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS GCA 90 bp | AGCTTGCCATGGGTCACTTGGTTACAAGTGACAAACCCATTAAACTaGCTTCAGTGCTCATTTCCAGCATTGCTGGTTTCCAGCTGTACA | + |
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Preference number: 5 (lower is better) Translates to: SLPWVTWLQVTNPLN*LQCSFPALLVSSCT Trigger: TGTACAGCTGGAAACCAGCAATGCTGGAAATGAGCACTGAAGGCAGTTTAATGGGTTTGTCACTTGTAACCAAGTGACCCATGGCAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS TCA 90 bp | AACTATAGGTCCAATCCATCCAAGTGCAACGCTGAAGGGACGTATTaGTTGCATAGGCCAGAATGTTGGCAAAAAGCTGGTAAATCCTGC | + |
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Preference number: 5 (lower is better) Translates to: NYRSNPSKCNAEGTY*LHRPECWQKAGKSC Trigger: GCAGGATTTACCAGCTTTTTGCCAACATTCTGGCCTATGCAATCAATACGTCCCTTCAGCGTTGCACTTGGATGGATTGGACCTATAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000423477.2 ENST00000529783.1 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS GCA 90 bp | TGGGTCACTTGGTTACAAGTGACAAACCCATTAAACTGCCTTCAGTaGTCATTTCCAGCATTGCTGGTTTCCAGCTGTACAAAGTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: WVTWLQVTNPLNCLQ*SFPALLVSSCTKSN Trigger: GTTTGACTTTGTACAGCTGGAAACCAGCAATGCTGGAAATGAGCACTGAAGGCAGTTTAATGGGTTTGTCACTTGTAACCAAGTGACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS TCA 90 bp | TTCAGTAATTACAATGCATGCACTTTTTGTCCCATATTGGGCTGCTaGCAGATGACTCAAGCAAGGCTCTGTCCTCAGGGAGCTTATAAA | + |
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Preference number: 5 (lower is better) Translates to: FSNYNACTFCPILGC*QMTQARLCPQGAYK Trigger: TTTATAAGCTCCCTGAGGACAGAGCCTTGCTTGAGTCATCTGTCAGCAGCCCAATATGGGACAAAAAGTGCATGCATTGTAATTACTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655044.1 ENST00000656407.1 |
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| CDS TCA 90 bp | AATTTTCTGAGTTTCAGATGTATATATGTGTATGAAAGCTATGAGTaGTCATGGACCAATACAACTGAAGAGAACAAGAGAATCTCGAGG | + |
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Preference number: 5 (lower is better) Translates to: NFLSFRCIYVYESYE*SWTNTTEENKRISR Trigger: CCTCGAGATTCTCTTGTTCTCTTCAGTTGTATTGGTCCATGATCACTCATAGCTTTCATACACATATATACATCTGAAACTCAGAAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656407.1 |
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| CDS CCA 72 bp | CTGGTAAATCCTGCAGGGTGCCACCAGACCGCGTGCTaGACCATCGCGGTAGCCTCGGAGCTTCTGACTGTG | + |
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Preference number: 6 (lower is better) Translates to: LVNPAGCHQTAC*TIAVASELLTV Trigger: CACAGTCAGAAGCTCCGAGGCTACCGCGATGGTCCAGCACGCGGTCTGGTGGCACCCTGCAGGATTTACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529783.1 |
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| CDS GCA 72 bp | AAGCTGGTAAATCCTGCAGGGTGCCACCAGACCGCGTaGTGGACCATCGCGGTAGCCTCGGAGCTTCTGACT | + |
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Preference number: 6 (lower is better) Translates to: KLVNPAGCHQTA*WTIAVASELLT Trigger: AGTCAGAAGCTCCGAGGCTACCGCGATGGTCCAGCACGCGGTCTGGTGGCACCCTGCAGGATTTACCAGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529783.1 |
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| CDS TCA 72 bp | CCATCCCACATGGCGTCAGCTTCCCTTCCATTCTCATaGCTCCATGGTCCATGGCTCCAACCTGGGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PSHMASASLPFS*LHGPWLQPGPL Trigger: CAGAGGCCCAGGTTGGAGCCATGGACCATGGAGTCATGAGAATGGAAGGGAAGCTGACGCCATGTGGGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS TCA 72 bp | TTCCACGAGTCCCCGCACCTTGGAGTGTTTCTGAGCTaGGGAGGAATGAGACTTTCACGCGGGCAAGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: FHESPHLGVFLS*GGMRLSRGQGD Trigger: GTCCCCTTGCCCGCGTGAAAGTCTCATTCCTCCTCAGCTCAGAAACACTCCAAGGTGCGGGGACTCGTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000533563.2 ENST00000656407.1 |
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| CDS CCA 72 bp | TCCATTCTCATGACTCCATGGTCCATGGCTCCAACCTaGGCCTCTGTTAGGCTGTGTCCTGGACCATCGCGG | + |
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Preference number: 6 (lower is better) Translates to: SILMTPWSMAPT*ASVRLCPGPSR Trigger: CCGCGATGGTCCAGGACACAGCCTAACAGAGGCCCAGGTTGGAGCCATGGACCATGGAGTCATGAGAATGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656407.1 |
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| CDS TCA 72 bp | AGTATAGGGCGCCGAGACCTTGGAGTGTTTCTGAGCTaGGGAGGAATGAGACTTTCACGCGGGCAAGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SIGRRDLGVFLS*GGMRLSRGQGD Trigger: GTCCCCTTGCCCGCGTGAAAGTCTCATTCCTCCTCAGCTCAGAAACACTCCAAGGTCTCGGCGCCCTATACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000423477.2 ENST00000529783.1 ENST00000655044.1 |
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| CDS GCA 72 bp | TTGACTGGTCTGAAGACTCCAGAGGCGGGACGAATTTaGGGACAGTTCTACCCCATCCCACATGGCGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LTGLKTPEAGRI*GQFYPIPHGVS Trigger: GCTGACGCCATGTGGGATGGGGTAGAACTGTCCGCAAATTCGTCCCGCCTCTGGAGTCTTCAGACCAGTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS CCA 72 bp | TCCATTCTCATGACTCCATGGTCCATGGCTCCAACCTaGGCCTCTGTTAGGCTGTGTCCTGTGGCACCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SILMTPWSMAPT*ASVRLCPVAPG Trigger: TCCAGGTGCCACAGGACACAGCCTAACAGAGGCCCAGGTTGGAGCCATGGACCATGGAGTCATGAGAATGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 |
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| CDS CCA 72 bp | CATGGCGTCAGCTTCCCTTCCATTCTCATGACTCCATaGTCCATGGCTCCAACCTGGGCCTCTGTTAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: HGVSFPSILMTP*SMAPTWASVRL Trigger: CAGCCTAACAGAGGCCCAGGTTGGAGCCATGGACCATGGAGTCATGAGAATGGAAGGGAAGCTGACGCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS CAA 72 bp | CTTGACTGGTCTGAAGACTCCAGAGGCGGGACGAATTaGCGGACAGTTCTACCCCATCCCACATGGCGTCAG | + |
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Preference number: 6 (lower is better) Translates to: LDWSEDSRGGTN*RTVLPHPTWRQ Trigger: CTGACGCCATGTGGGATGGGGTAGAACTGTCCGCAAATTCGTCCCGCCTCTGGAGTCTTCAGACCAGTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS CAA 90 bp | AATTTCGGCCTTGACTGGTCTGAAGACTCCAGAGGCGGGACGAATTaGCGGACAGTTCTACCCCATCCCACATGGCGTCAGCTTCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: NFGLDWSEDSRGGTN*RTVLPHPTWRQLPF Trigger: GAAGGGAAGCTGACGCCATGTGGGATGGGGTAGAACTGTCCGCAAATTCGTCCCGCCTCTGGAGTCTTCAGACCAGTCAAGGCCGAAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS TCA 72 bp | TGTTGGCCAGGCTGTTCTCGAACTTCTGACCTTGGGTaGTCAGTGCGCCTCGGCCTCCCAAAGTCTTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: CWPGCSRTSDLG*SVRLGLPKSLD Trigger: ATCCAAAGACTTTGGGAGGCCGAGGCGCACTGATCACCCAAGGTCAGAAGTTCGAGAACAGCCTGGCCAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS CCA 72 bp | CGGATGAGGGAAGGCCAGTATAGGGCGCCGAGACCTTaGAGTGTTTCTGAGCTGAGGAGGAATGAGACTTTC | + |
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Preference number: 6 (lower is better) Translates to: RMREGQYRAPRP*SVSELRRNETF Trigger: GAAAGTCTCATTCCTCCTCAGCTCAGAAACACTCCAAGGTCTCGGCGCCCTATACTGGCCTTCCCTCATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423477.2 ENST00000529783.1 ENST00000655044.1 |
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| CDS CCA 72 bp | GAGAGAGGAGAGGCTTGGTTGAATTTCGGCCTTGACTaGTCTGAAGACTCCAGAGGCGGGACGAATTTGCGG | + |
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Preference number: 6 (lower is better) Translates to: ERGEAWLNFGLD*SEDSRGGTNLR Trigger: CCGCAAATTCGTCCCGCCTCTGGAGTCTTCAGACCAGTCAAGGCCGAAATTCAACCAAGCCTCTCCTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS GCA 72 bp | AAGCTGGTAAATCCTGCAGGGTGCCACCAGACCGCGTaGTGCAAACAAATAACAGCTAGAGAGAGGAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: KLVNPAGCHQTA*CKQITARERRG Trigger: GCCTCTCCTCTCTCTAGCTGTTATTTGTTTGCAGCACGCGGTCTGGTGGCACCCTGCAGGATTTACCAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS CCA 72 bp | GGGACGAATTTGCGGACAGTTCTACCCCATCCCACATaGCGTCAGCTTCCCTTCCATTCTCATGACTCCATG | + |
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Preference number: 6 (lower is better) Translates to: GTNLRTVLPHPT*RQLPFHSHDSM Trigger: CATGGAGTCATGAGAATGGAAGGGAAGCTGACGCCATGTGGGATGGGGTAGAACTGTCCGCAAATTCGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS CCA 72 bp | GGGCCGACCCTAAACCAGTCTCTGATTAGCCAGACTTaGGTCCTGTTTCCATTCCTAAAGCTGGGGATAGGT | + |
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Preference number: 6 (lower is better) Translates to: GPTLNQSLISQT*VLFPFLKLGIG Trigger: ACCTATCCCCAGCTTTAGGAATGGAAACAGGACCCAAGTCTGGCTAATCAGAGACTGGTTTAGGGTCGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS CCA 72 bp | AGCGCGAATCAAATCCTTCCACGAGTCCCCGCACCTTaGAGTGTTTCTGAGCTGAGGAGGAATGAGACTTTC | + |
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Preference number: 6 (lower is better) Translates to: SANQILPRVPAP*SVSELRRNETF Trigger: GAAAGTCTCATTCCTCCTCAGCTCAGAAACACTCCAAGGTGCGGGGACTCGTGGAAGGATTTGATTCGCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000533563.2 ENST00000656407.1 |
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| CDS GCA 72 bp | CATAGGCCAGAATGTTGGCAAAAAGCTGGTAAATCCTaGAGGGTGCCACCAGACCGCGTGCTGCAAACAAAT | + |
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Preference number: 6 (lower is better) Translates to: HRPECWQKAGKS*RVPPDRVLQTN Trigger: ATTTGTTTGCAGCACGCGGTCTGGTGGCACCCTGCAGGATTTACCAGCTTTTTGCCAACATTCTGGCCTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS TCA 72 bp | AAAGTTACAGGTAAGTTGCGGGCCCTAAGCTTACTGTaGGGCAGTCAGAGGTGGCTCTTTGGAGAAGACAAG | + |
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Preference number: 6 (lower is better) Translates to: KVTGKLRALSLL*GSQRWLFGEDK Trigger: CTTGTCTTCTCCAAAGAGCCACCTCTGACTGCCTCACAGTAAGCTTAGGGCCCGCAACTTACCTGTAACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655044.1 ENST00000656407.1 |
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| CDS CCA 72 bp | CCTAAGCTTACTGTGAGGCAGTCAGAGGTGGCTCTTTaGAGAAGACAAGGCTTGAACCTTAAAAGGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PKLTVRQSEVAL*RRQGLNLKRWA Trigger: TGCCCACCTTTTAAGGTTCAAGCCTTGTCTTCTCCAAAGAGCCACCTCTGACTGCCTCACAGTAAGCTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655044.1 ENST00000656407.1 |
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| CDS CAA 90 bp | ACAATGTCCAAACTATGCCATGGAGCTTCTCTGACAAATACCCCATaGATGTCCCCACTAGGTATGGACATTACAGCCTGCACTGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: TMSKLCHGASLTNTP*MSPLGMDITACTVP Trigger: GGGGACAGTGCAGGCTGTAATGTCCATACCTAGTGGGGACATCAATGGGGTATTTGTCAGAGAAGCTCCATGGCATAGTTTGGACATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656407.1 |
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| CDS TCA 72 bp | CATGCACTTTTTGTCCCATATTGGGCTGCTGACAGATaGCTCAAGCAAGGCTCTGTCCTCAGGGAGCTTATA | + |
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Preference number: 6 (lower is better) Translates to: HALFVPYWAADR*LKQGSVLRELI Trigger: TATAAGCTCCCTGAGGACAGAGCCTTGCTTGAGTCATCTGTCAGCAGCCCAATATGGGACAAAAAGTGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655044.1 ENST00000656407.1 |
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| CDS GCA 72 bp | TTGGGTCCTGTTTCCATTCCTAAAGCTGGGGATAGGTaGGCCTCATCTAAACCATGCTGTCTGAATAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: LGPVSIPKAGDR*ASSKPCCLNSK Trigger: CTTGCTATTCAGACAGCATGGTTTAGATGAGGCGCACCTATCCCCAGCTTTAGGAATGGAAACAGGACCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS TCA 72 bp | TCCAATCCATCCAAGTGCAACGCTGAAGGGACGTATTaGTTGCATAGGCCAGAATGTTGGCAAAAAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SNPSKCNAEGTY*LHRPECWQKAG Trigger: ACCAGCTTTTTGCCAACATTCTGGCCTATGCAATCAATACGTCCCTTCAGCGTTGCACTTGGATGGATTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000423477.2 ENST00000529783.1 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS CAA 72 bp | AAACTATGCCATGGAGCTTCTCTGACAAATACCCCATaGATGTCCCCACTAGGTATGGACATTACAGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: KLCHGASLTNTP*MSPLGMDITAC Trigger: GCAGGCTGTAATGTCCATACCTAGTGGGGACATCAATGGGGTATTTGTCAGAGAAGCTCCATGGCATAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656407.1 |
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| CDS GCA 72 bp | TGGGTCACTTGGTTACAAGTGACAAACCCATTAAACTaGCTTCAGTGCTCATTTCCAGCATTGCTGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: WVTWLQVTNPLN*LQCSFPALLVS Trigger: GGAAACCAGCAATGCTGGAAATGAGCACTGAAGGCAGTTTAATGGGTTTGTCACTTGTAACCAAGTGACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS GCA 72 bp | ATCCATCCAAGTGCAACGCTGAAGGGACGTATTGATTaGATAGGCCAGAATGTTGGCAAAAAGCTGGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: IHPSATLKGRID*IGQNVGKKLVN Trigger: ATTTACCAGCTTTTTGCCAACATTCTGGCCTATGCAATCAATACGTCCCTTCAGCGTTGCACTTGGATGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000423477.2 ENST00000529783.1 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS GCA 72 bp | TGGTTACAAGTGACAAACCCATTAAACTGCCTTCAGTaGTCATTTCCAGCATTGCTGGTTTCCAGCTGTACA | + |
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Preference number: 6 (lower is better) Translates to: WLQVTNPLNCLQ*SFPALLVSSCT Trigger: TGTACAGCTGGAAACCAGCAATGCTGGAAATGAGCACTGAAGGCAGTTTAATGGGTTTGTCACTTGTAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS GCA 72 bp | TTTGAACCTGCACAGCCAGAAACAATGTCCAAACTATaGCATGGAGCTTCTCTGACAAATACCCCATTGATG | + |
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Preference number: 6 (lower is better) Translates to: FEPAQPETMSKL*HGASLTNTPLM Trigger: CATCAATGGGGTATTTGTCAGAGAAGCTCCATGGCATAGTTTGGACATTGTTTCTGGCTGTGCAGGTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656407.1 |
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| CDS CCA 72 bp | TGCCAATACAAATCTGTGAGCTTGCCATGGGTCACTTaGTTACAAGTGACAAACCCATTAAACTGCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: CQYKSVSLPWVT*LQVTNPLNCLQ Trigger: CTGAAGGCAGTTTAATGGGTTTGTCACTTGTAACCAAGTGACCCATGGCAAGCTCACAGATTTGTATTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS CAA 72 bp | CTGCCAATACAAATCTGTGAGCTTGCCATGGGTCACTaGGTTACAAGTGACAAACCCATTAAACTGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LPIQICELAMGH*VTSDKPIKLPS Trigger: TGAAGGCAGTTTAATGGGTTTGTCACTTGTAACCAAGTGACCCATGGCAAGCTCACAGATTTGTATTGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS CAA 72 bp | AACTCAGATAATCTTTGGGAGAGCCAGACTCTGGGTTaGAACCTGCACAGCCAGAAACAATGTCCAAACTAT | + |
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Preference number: 6 (lower is better) Translates to: NSDNLWESQTLG*NLHSQKQCPNY Trigger: ATAGTTTGGACATTGTTTCTGGCTGTGCAGGTTCAAACCCAGAGTCTGGCTCTCCCAAAGATTATCTGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656407.1 |
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| CDS CAA 72 bp | AACCCATTAAACTGCCTTCAGTGCTCATTTCCAGCATaGCTGGTTTCCAGCTGTACAAAGTCAAACATTTGT | + |
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Preference number: 6 (lower is better) Translates to: NPLNCLQCSFPA*LVSSCTKSNIC Trigger: ACAAATGTTTGACTTTGTACAGCTGGAAACCAGCAATGCTGGAAATGAGCACTGAAGGCAGTTTAATGGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS CAA 90 bp | CAAGTGACAAACCCATTAAACTGCCTTCAGTGCTCATTTCCAGCATaGCTGGTTTCCAGCTGTACAAAGTCAAACATTTGTCTCCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: QVTNPLNCLQCSFPA*LVSSCTKSNICLLL Trigger: TAAAAGGAGACAAATGTTTGACTTTGTACAGCTGGAAACCAGCAATGCTGGAAATGAGCACTGAAGGCAGTTTAATGGGTTTGTCACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000423477.2 ENST00000533563.2 ENST00000655044.1 ENST00000656407.1 |
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| CDS TCA 72 bp | AGTTTCAGATGTATATATGTGTATGAAAGCTATGAGTaGTCATGGACCAATACAACTGAAGAGAACAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: SFRCIYVYESYE*SWTNTTEENKR Trigger: TCTCTTGTTCTCTTCAGTTGTATTGGTCCATGATCACTCATAGCTTTCATACACATATATACATCTGAAACT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656407.1 |
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