Pregenerated sensors for BOLA3 (Homo sapiens)
Ensembl gene IDs: ENSG00000163170Ensembl transcript IDs: ENST00000469676.1, ENST00000477685.5, ENST00000484655.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGAGAGGAAGGTCAGGGCAGAGGAAGATGCTGTTGCCCCTGAGCTaGGCCACTGTGCAGGCCCGCCTGCCATTCCCCCTGCAAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: QRGRSGQRKMLLPLS*ATVQARLPFPLQGR Trigger: CCTGCCTTGCAGGGGGAATGGCAGGCGGGCCTGCACAGTGGCCCAGCTCAGGGGCAACAGCATCTTCCTCTGCCCTGACCTTCCTCTCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000477685.5 ENST00000484655.1 |
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| CDS TCA 90 bp | CTTCCCAAGGCCCCGGCCCCGCTGCAGTCCCTCGCACCCACGCCTTaGCTCTGGGCTATGACTCCTGTCTTCTGCTCGGTAAACCAATCC | + |
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Preference number: 5 (lower is better) Translates to: LPKAPAPLQSLAPTP*LWAMTPVFCSVNQS Trigger: GGATTGGTTTACCGAGCAGAAGACAGGAGTCATAGCCCAGAGTCAAGGCGTGGGTGCGAGGGACTGCAGCGGGGCCGGGGCCTTGGGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS TCA 90 bp | GAGCTGTGCACTGGCTCTCTCACCACTGGTCTTATAGGCCAGGAATaGGTCCGGCAGCATCCCAGAGCTGACCCCAGGGCAGGCCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: ELCTGSLTTGLIGQE*VRQHPRADPRAGPQ Trigger: CTGAGGGCCTGCCCTGGGGTCAGCTCTGGGATGCTGCCGGACTCATTCCTGGCCTATAAGACCAGTGGTGAGAGAGCCAGTGCACAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS CCA 90 bp | GAGCGCGTGGGAAGTGCCCCCTGCTTGGGTTCTGCTCCGGTAGTGTaGGATTTGGAGGAGGATCAAGGTCAGAGGCCCAGTCGACCTTCC | + |
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Preference number: 5 (lower is better) Translates to: ERVGSAPCLGSAPVV*DLEEDQGQRPSRPS Trigger: GGAAGGTCGACTGGGCCTCTGACCTTGATCCTCCTCCAAATCCCACACTACCGGAGCAGAACCCAAGCAGGGGGCACTTCCCACGCGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS GCA 90 bp | GGAGAGATTAGGAGAGCGCGTGGGAAGTGCCCCCTGCTTGGGTTCTaGTCCGGTAGTGTGGGATTTGGAGGAGGATCAAGGTCAGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GEIRRARGKCPLLGF*SGSVGFGGGSRSEA Trigger: GGCCTCTGACCTTGATCCTCCTCCAAATCCCACACTACCGGAGCAGAACCCAAGCAGGGGGCACTTCCCACGCGCTCTCCTAATCTCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS TCA 90 bp | GATGACAGGTTGGAGGACACTAGGGCCGTTCATGGGTGCTGGTGCTaGAGGTCCCACCCCTCTACCCCTCAGTCCTTCCTGATAGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: DDRLEDTRAVHGCWC*RSHPSTPQSFLIAQ Trigger: CTGAGCTATCAGGAAGGACTGAGGGGTAGAGGGGTGGGACCTTCAGCACCAGCACCCATGAACGGCCCTAGTGTCCTCCAACCTGTCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS CCA 90 bp | TGTCTGCCTGCTGTGTGGAGGGACAGAAACTCGATGTTGAGAGGCTaGACAGGATTGCCAGGAGTGAGGGTGGGGTGGAGCTGCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: CLPAVWRDRNSMLRG*TGLPGVRVGWSCFW Trigger: CCAGAAGCAGCTCCACCCCACCCTCACTCCTGGCAATCCTGTCCAGCCTCTCAACATCGAGTTTCTGTCCCTCCACACAGCAGGCAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS GCA 90 bp | AGGATGGTTCAGAAAGGGGGAGAGATTAGGAGAGCGCGTGGGAAGTaGCCCCTGCTTGGGTTCTGCTCCGGTAGTGTGGGATTTGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: RMVQKGGEIRRARGK*PLLGFCSGSVGFGG Trigger: TCCTCCAAATCCCACACTACCGGAGCAGAACCCAAGCAGGGGGCACTTCCCACGCGCTCTCCTAATCTCTCCCCCTTTCTGAACCATCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS TCA 90 bp | GTAGTGAAGGAGCAGAAAAGCAGGTCGGCAGTCACTTGGCTGGGCTaGGTGCATGCTGAAAAGGCAGACTGGGAATGGAGTGTGGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: VVKEQKSRSAVTWLG*VHAEKADWEWSVAG Trigger: GCCTGCCACACTCCATTCCCAGTCTGCCTTTTCAGCATGCACTCAGCCCAGCCAAGTGACTGCCGACCTGCTTTTCTGCTCCTTCACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS GCA 90 bp | TTCAGAAAGGGGGAGAGATTAGGAGAGCGCGTGGGAAGTGCCCCCTaGTTGGGTTCTGCTCCGGTAGTGTGGGATTTGGAGGAGGATCAA | + |
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Preference number: 5 (lower is better) Translates to: FRKGERLGERVGSAP*LGSAPVVWDLEEDQ Trigger: TTGATCCTCCTCCAAATCCCACACTACCGGAGCAGAACCCAAGCAGGGGGCACTTCCCACGCGCTCTCCTAATCTCTCCCCCTTTCTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS TCA 90 bp | TGTGGGCAGCGGCCTTTAGTGGAACAATCAACTGACATCCCCAGATaGTCACTGTCCACGCTGAAAGTCACCGCAGTGGAAGAACCCGCG | + |
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Preference number: 5 (lower is better) Translates to: CGQRPLVEQSTDIPR*SLSTLKVTAVEEPA Trigger: CGCGGGTTCTTCCACTGCGGTGACTTTCAGCGTGGACAGTGATCATCTGGGGATGTCAGTTGATTGTTCCACTAAAGGCCGCTGCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469676.1 |
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| CDS CCA 90 bp | ACTCCCTCGCCTTTAGGCCTGATTAACATGTCTCGCCCTCCCCAGTaGGATGTGACCTCACAGCCCACTGCTCAATTAGCCAGCTATCCT | + |
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Preference number: 5 (lower is better) Translates to: TPSPLGLINMSRPPQ*DVTSQPTAQLASYP Trigger: AGGATAGCTGGCTAATTGAGCAGTGGGCTGTGAGGTCACATCCCACTGGGGAGGGCGAGACATGTTAATCAGGCCTAAAGGCGAGGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS TCA 90 bp | GCTGACCCCAGGGCAGGCCCTCAGAGGCACTTGGTGCTGGATGAATaGATGAGCAGGGGAAGAACTAGTCAATTAGGGACAGAAATGCAA | + |
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Preference number: 5 (lower is better) Translates to: ADPRAGPQRHLVLDE*MSRGRTSQLGTEMQ Trigger: TTGCATTTCTGTCCCTAATTGACTAGTTCTTCCCCTGCTCATTCATTCATCCAGCACCAAGTGCCTCTGAGGGCCTGCCCTGGGGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS TCA 90 bp | ATCTTAGCGGATCTGTGGGCAGCGGCCTTTAGTGGAACAATCAACTaGCATCCCCAGATGATCACTGTCCACGCTGAAAGTCACCGCAGT | + |
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Preference number: 5 (lower is better) Translates to: ILADLWAAAFSGTIN*HPQMITVHAESHRS Trigger: ACTGCGGTGACTTTCAGCGTGGACAGTGATCATCTGGGGATGTCAGTTGATTGTTCCACTAAAGGCCGCTGCCCACAGATCCGCTAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS TCA 90 bp | TGTGGGCAGCGGCCTTTAGTGGAACAATCAACTGACATCCCCAGATaGTCACTGTCCACGCTGAAAGTCACCGCAGTGGAAGAACTTCTC | + |
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Preference number: 5 (lower is better) Translates to: CGQRPLVEQSTDIPR*SLSTLKVTAVEELL Trigger: GAGAAGTTCTTCCACTGCGGTGACTTTCAGCGTGGACAGTGATCATCTGGGGATGTCAGTTGATTGTTCCACTAAAGGCCGCTGCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS GCA 90 bp | GTGACCTCACAGCCCACTGCTCAATTAGCCAGCTATCCTTCATCATaGACTCCTTCTCACTGGGAGCAAAGTCAGAATTCTATGAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: VTSQPTAQLASYPSS*TPSHWEQSQNSMKE Trigger: TTCTTTCATAGAATTCTGACTTTGCTCCCAGTGAGAAGGAGTGCATGATGAAGGATAGCTGGCTAATTGAGCAGTGGGCTGTGAGGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS TCA 90 bp | CACTCCTTCTCACTGGGAGCAAAGTCAGAATTCTATGAAAGAACCTaGAGAAGGAGTATCTGTAGGTTGTTTACCATTGGCAACAACACC | + |
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Preference number: 5 (lower is better) Translates to: HSFSLGAKSEFYERT*RRSICRLFTIGNNT Trigger: GGTGTTGTTGCCAATGGTAAACAACCTACAGATACTCCTTCTTCAGGTTCTTTCATAGAATTCTGACTTTGCTCCCAGTGAGAAGGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS CCA 90 bp | ACTGCTCAATTAGCCAGCTATCCTTCATCATGCACTCCTTCTCACTaGGAGCAAAGTCAGAATTCTATGAAAGAACCTGAAGAAGGAGTA | + |
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Preference number: 5 (lower is better) Translates to: TAQLASYPSSCTPSH*EQSQNSMKEPEEGV Trigger: TACTCCTTCTTCAGGTTCTTTCATAGAATTCTGACTTTGCTCCCAGTGAGAAGGAGTGCATGATGAAGGATAGCTGGCTAATTGAGCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS TCA 90 bp | GGCCCCAAACCTAATTCAAGAGATGTTTGCTTCCATATAATGTTGTaGCACTATTATGCCGATAGTTTTATAGGTAAGGAAACTGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: GPKPNSRDVCFHIML*HYYADSFIGKETEA Trigger: TGCCTCAGTTTCCTTACCTATAAAACTATCGGCATAATAGTGTCACAACATTATATGGAAGCAAACATCTCTTGAATTAGGTTTGGGGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS GCA 72 bp | GAGGCCCAGTCGACCTTCCCAAGGCCCCGGCCCCGCTaGAGTCCCTCGCACCCACGCCTTGACTCTGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: EAQSTFPRPRPR*SPSHPRLDSGL Trigger: TAGCCCAGAGTCAAGGCGTGGGTGCGAGGGACTGCAGCGGGGCCGGGGCCTTGGGAAGGTCGACTGGGCCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS TCA 72 bp | GCCCCGGCCCCGCTGCAGTCCCTCGCACCCACGCCTTaGCTCTGGGCTATGACTCCTGTCTTCTGCTCGGTA | + |
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Preference number: 6 (lower is better) Translates to: APAPLQSLAPTP*LWAMTPVFCSV Trigger: TACCGAGCAGAAGACAGGAGTCATAGCCCAGAGTCAAGGCGTGGGTGCGAGGGACTGCAGCGGGGCCGGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS CCA 72 bp | AGGTCAGGGCAGAGGAAGATGCTGTTGCCCCTGAGCTaGGCCACTGTGCAGGCCCGCCTGCCATTCCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: RSGQRKMLLPLS*ATVQARLPFPL Trigger: CAGGGGGAATGGCAGGCGGGCCTGCACAGTGGCCCAGCTCAGGGGCAACAGCATCTTCCTCTGCCCTGACCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000477685.5 ENST00000484655.1 |
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| CDS CAA 90 bp | GTGGGAAGTGCCCCCTGCTTGGGTTCTGCTCCGGTAGTGTGGGATTaGGAGGAGGATCAAGGTCAGAGGCCCAGTCGACCTTCCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: VGSAPCLGSAPVVWD*EEDQGQRPSRPSQG Trigger: GCCTTGGGAAGGTCGACTGGGCCTCTGACCTTGATCCTCCTCCAAATCCCACACTACCGGAGCAGAACCCAAGCAGGGGGCACTTCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS TCA 72 bp | TTGGAGGACACTAGGGCCGTTCATGGGTGCTGGTGCTaGAGGTCCCACCCCTCTACCCCTCAGTCCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LEDTRAVHGCWC*RSHPSTPQSFL Trigger: CAGGAAGGACTGAGGGGTAGAGGGGTGGGACCTTCAGCACCAGCACCCATGAACGGCCCTAGTGTCCTCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS GCA 72 bp | AGGAGAGCGCGTGGGAAGTGCCCCCTGCTTGGGTTCTaGTCCGGTAGTGTGGGATTTGGAGGAGGATCAAGG | + |
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Preference number: 6 (lower is better) Translates to: RRARGKCPLLGF*SGSVGFGGGSR Trigger: CCTTGATCCTCCTCCAAATCCCACACTACCGGAGCAGAACCCAAGCAGGGGGCACTTCCCACGCGCTCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS GCA 72 bp | GGGGAGAGATTAGGAGAGCGCGTGGGAAGTGCCCCCTaGTTGGGTTCTGCTCCGGTAGTGTGGGATTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GERLGERVGSAP*LGSAPVVWDLE Trigger: CTCCAAATCCCACACTACCGGAGCAGAACCCAAGCAGGGGGCACTTCCCACGCGCTCTCCTAATCTCTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS GCA 72 bp | CAGAAAGGGGGAGAGATTAGGAGAGCGCGTGGGAAGTaGCCCCTGCTTGGGTTCTGCTCCGGTAGTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: QKGGEIRRARGK*PLLGFCSGSVG Trigger: TCCCACACTACCGGAGCAGAACCCAAGCAGGGGGCACTTCCCACGCGCTCTCCTAATCTCTCCCCCTTTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS CAA 72 bp | GCCCCCTGCTTGGGTTCTGCTCCGGTAGTGTGGGATTaGGAGGAGGATCAAGGTCAGAGGCCCAGTCGACCT | + |
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Preference number: 6 (lower is better) Translates to: APCLGSAPVVWD*EEDQGQRPSRP Trigger: AGGTCGACTGGGCCTCTGACCTTGATCCTCCTCCAAATCCCACACTACCGGAGCAGAACCCAAGCAGGGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS TCA 72 bp | ACTGGCTCTCTCACCACTGGTCTTATAGGCCAGGAATaGGTCCGGCAGCATCCCAGAGCTGACCCCAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: TGSLTTGLIGQE*VRQHPRADPRA Trigger: TGCCCTGGGGTCAGCTCTGGGATGCTGCCGGACTCATTCCTGGCCTATAAGACCAGTGGTGAGAGAGCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS CCA 72 bp | GGAAGTGCCCCCTGCTTGGGTTCTGCTCCGGTAGTGTaGGATTTGGAGGAGGATCAAGGTCAGAGGCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GSAPCLGSAPVV*DLEEDQGQRPS Trigger: ACTGGGCCTCTGACCTTGATCCTCCTCCAAATCCCACACTACCGGAGCAGAACCCAAGCAGGGGGCACTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS CAA 72 bp | GAGAGATTAGGAGAGCGCGTGGGAAGTGCCCCCTGCTaGGGTTCTGCTCCGGTAGTGTGGGATTTGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: ERLGERVGSAPC*GSAPVVWDLEE Trigger: CTCCTCCAAATCCCACACTACCGGAGCAGAACCCAAGCAGGGGGCACTTCCCACGCGCTCTCCTAATCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS CAA 90 bp | AGAAAGGGGGAGAGATTAGGAGAGCGCGTGGGAAGTGCCCCCTGCTaGGGTTCTGCTCCGGTAGTGTGGGATTTGGAGGAGGATCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: RKGERLGERVGSAPC*GSAPVVWDLEEDQG Trigger: ACCTTGATCCTCCTCCAAATCCCACACTACCGGAGCAGAACCCAAGCAGGGGGCACTTCCCACGCGCTCTCCTAATCTCTCCCCCTTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS TCA 72 bp | AATCAACTGACATCCCCAGATGATCACTGTCCACGCTaGAAGTCACCGCAGTGGAAGAACCCGCGGATCCCG | + |
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Preference number: 6 (lower is better) Translates to: NQLTSPDDHCPR*KSPQWKNPRIP Trigger: CGGGATCCGCGGGTTCTTCCACTGCGGTGACTTTCAGCGTGGACAGTGATCATCTGGGGATGTCAGTTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469676.1 |
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| CDS TCA 72 bp | GGCATTACAATGATGGAAGCACCGGGCACTGGTCCCTaGCTAGACGTGGATGACAGGTTGGAGGACACTAGG | + |
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Preference number: 6 (lower is better) Translates to: GITMMEAPGTGP*LDVDDRLEDTR Trigger: CCTAGTGTCCTCCAACCTGTCATCCACGTCTAGTCAGGGACCAGTGCCCGGTGCTTCCATCATTGTAATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS TCA 72 bp | GAGCAGAAAAGCAGGTCGGCAGTCACTTGGCTGGGCTaGGTGCATGCTGAAAAGGCAGACTGGGAATGGAGT | + |
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Preference number: 6 (lower is better) Translates to: EQKSRSAVTWLG*VHAEKADWEWS Trigger: ACTCCATTCCCAGTCTGCCTTTTCAGCATGCACTCAGCCCAGCCAAGTGACTGCCGACCTGCTTTTCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS CCA 72 bp | CCTTTAGGCCTGATTAACATGTCTCGCCCTCCCCAGTaGGATGTGACCTCACAGCCCACTGCTCAATTAGCC | + |
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Preference number: 6 (lower is better) Translates to: PLGLINMSRPPQ*DVTSQPTAQLA Trigger: GGCTAATTGAGCAGTGGGCTGTGAGGTCACATCCCACTGGGGAGGGCGAGACATGTTAATCAGGCCTAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS GCA 72 bp | GGTGATAGAACCCAGGCTCATGGGACCAAAGTAACCTaGAGGAAACAGTGCCTTCTGGAGCGAGTCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GDRTQAHGTKVT*RKQCLLERVRR Trigger: TCTCCTGACTCGCTCCAGAAGGCACTGTTTCCTGCAGGTTACTTTGGTCCCATGAGCCTGGGTTCTATCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS TCA 72 bp | AGGGCAGGCCCTCAGAGGCACTTGGTGCTGGATGAATaGATGAGCAGGGGAAGAACTAGTCAATTAGGGACA | + |
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Preference number: 6 (lower is better) Translates to: RAGPQRHLVLDE*MSRGRTSQLGT Trigger: TGTCCCTAATTGACTAGTTCTTCCCCTGCTCATTCATTCATCCAGCACCAAGTGCCTCTGAGGGCCTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS CCA 72 bp | GAGAAAGGTCCAGAGTGTGATTGTCTGCCTGCTGTGTaGAGGGACAGAAACTCGATGTTGAGAGGCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: EKGPECDCLPAV*RDRNSMLRGWT Trigger: TGTCCAGCCTCTCAACATCGAGTTTCTGTCCCTCCACACAGCAGGCAGACAATCACACTCTGGACCTTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS TCA 72 bp | CGGCCTTTAGTGGAACAATCAACTGACATCCCCAGATaGTCACTGTCCACGCTGAAAGTCACCGCAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: RPLVEQSTDIPR*SLSTLKVTAVE Trigger: TTCCACTGCGGTGACTTTCAGCGTGGACAGTGATCATCTGGGGATGTCAGTTGATTGTTCCACTAAAGGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS TCA 72 bp | GATCTGTGGGCAGCGGCCTTTAGTGGAACAATCAACTaGCATCCCCAGATGATCACTGTCCACGCTGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: DLWAAAFSGTIN*HPQMITVHAES Trigger: ACTTTCAGCGTGGACAGTGATCATCTGGGGATGTCAGTTGATTGTTCCACTAAAGGCCGCTGCCCACAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS GCA 72 bp | CAGGAAACAGTGCCTTCTGGAGCGAGTCAGGAGAGATaGCCAAGTAAGAGGCATTACAATGATGGAAGCACC | + |
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Preference number: 6 (lower is better) Translates to: QETVPSGASQER*PSKRHYNDGST Trigger: GGTGCTTCCATCATTGTAATGCCTCTTACTTGGGCATCTCTCCTGACTCGCTCCAGAAGGCACTGTTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS TCA 72 bp | CCTGTGTCACAGAATCTCAGAGCACCTCCTTTAAAATaGGCTGTGCACTGGCTCTCTCACCACTGGTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: PVSQNLRAPPLK*AVHWLSHHWSY Trigger: ATAAGACCAGTGGTGAGAGAGCCAGTGCACAGCTCATTTTAAAGGAGGTGCTCTGAGATTCTGTGACACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000469676.1 ENST00000484655.1 |
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| CDS TCA 72 bp | AATCAACTGACATCCCCAGATGATCACTGTCCACGCTaGAAGTCACCGCAGTGGAAGAACTTCTCTTCATGC | + |
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Preference number: 6 (lower is better) Translates to: NQLTSPDDHCPR*KSPQWKNFSSC Trigger: GCATGAAGAGAAGTTCTTCCACTGCGGTGACTTTCAGCGTGGACAGTGATCATCTGGGGATGTCAGTTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS CCA 72 bp | AAGGTTGAATTCGGTAAGATACAGAGCCAGAAAAGCTaGATAGCCTGCCTCAGATCCATACCACTAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: KVEFGKIQSQKS*IACLRSIPLGH Trigger: ATGGCCTAGTGGTATGGATCTGAGGCAGGCTATCCAGCTTTTCTGGCTCTGTATCTTACCGAATTCAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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| CDS CAA 72 bp | GTAAGGAAACTGAGGCACACAGTAATGTGCCCAAGGTaGAATTCGGTAAGATACAGAGCCAGAAAAGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VRKLRHTVMCPR*NSVRYRARKAG Trigger: TCCAGCTTTTCTGGCTCTGTATCTTACCGAATTCAACCTTGGGCACATTACTGTGTGCCTCAGTTTCCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484655.1 |
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