Pregenerated sensors for BOD1L2 (Homo sapiens)
Ensembl gene IDs: ENSG00000228075Ensembl transcript IDs: ENST00000585477.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAAGCAAATCCCTGCCCTGGAGGAAGCTCACATTTAAGTGGGGATaGCAGATCTGTAAGCAAAGACAGTTCACTGTGGTGAGGTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: QSKSLPWRKLTFKWG*QICKQRQFTVVRWC Trigger: ACACCACCTCACCACAGTGAACTGTCTTTGCTTACAGATCTGTCATCCCCACTTAAATGTGAGCTTCCTCCAGGGCAGGGATTTGCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR TCA 90 bp | TGCTTCGTCAGACCTAGCTACTATAGTAAGTGTGGTCATCCCTTATaGGATCTATGGGAGCACAGAGGAAGGAGTCTGTCACTCCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: CFVRPSYYSKCGHPL*DLWEHRGRSLSLLL Trigger: AAGCAGGAGTGACAGACTCCTTCCTCTGTGCTCCCATAGATCTCATAAGGGATGACCACACTTACTATAGTAGCTAGGTCTGACGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR GCA 90 bp | TTCAGAATACAGCAGTGTCCATCGCATAGGTTAGCATTTTCCATTTaGCAAACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTGG | + |
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Preference number: 1 (lower is better) Translates to: FRIQQCPSHRLAFSI*QTHGGNGKHSGYGW Trigger: CCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGTTTGGCAAATGGAAAATGCTAACCTATGCGATGGACACTGCTGTATTCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR CCA 90 bp | ATTTGCCAAACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTaGCAGATTTGGCAAACTAAAGCATGGGGCCCCAGTAAATTTGAA | + |
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Preference number: 1 (lower is better) Translates to: ICQTHGGNGKHSGYG*QIWQTKAWGPSKFE Trigger: TTCAAATTTACTGGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGTTTGGCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR CCA 90 bp | ACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTGGCAGATTTaGCAAACTAAAGCATGGGGCCCCAGTAAATTTGAATTTCAAATA | + |
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Preference number: 1 (lower is better) Translates to: THGGNGKHSGYGWQI*QTKAWGPSKFEFQI Trigger: TATTTGAAATTCAAATTTACTGGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR TCA 90 bp | GCATGCACGCACGCACGTAATGAGCTCTCTCAAGTCACGGTAGTTTaGTTTATTTACATATTCATTTTCAGAATACAGCAGTGTCCATCG | + |
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Preference number: 1 (lower is better) Translates to: ACTHARNELSQVTVV*FIYIFIFRIQQCPS Trigger: CGATGGACACTGCTGTATTCTGAAAATGAATATGTAAATAAATCAAACTACCGTGACTTGAGAGAGCTCATTACGTGCGTGCGTGCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR TCA 90 bp | CCATTTGCCAAACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTGGCAGAGCATTCCCTTCACAGTaGGCAGAGGGAACACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: PFAKLMVGTGSIQAMVGRAFPSQ*AEGTQG Trigger: ACCCTGTGTTCCCTCTGCTCACTGTGAAGGGAATGC...TCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGTTTGGCAAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR TCA 90 bp | CCATTTGCCAAACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTGGCAGAGAGGGTAGGAGTGGTTaGGGGCATTCCCTTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: PFAKLMVGTGSIQAMVGREGRSG*GHSLHS Trigger: ACTGTGAAGGGAATGCCCTCAACCACTCCTACCCTC...TCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGTTTGGCAAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR GCA 90 bp | CCATTTGCCAAACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTGGCAGAGTGTGTTTGGTGTCATaGCCTTGGAAAGGCTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PFAKLMVGTGSIQAMVGRVCLVS*PWKGWP Trigger: TGGCCAGCCTTTCCAAGGGCATGACACCAAACACAC...TCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGTTTGGCAAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGCATTCAGGCTATGGTTGGCAGATTTGGCAAACTAAAGCATGGGGCCCCGGGCCTCATAAACCATaGCAGGTGTCTGACCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: GKHSGYGWQIWQTKAWGPGPHKP*QVSDLL Trigger: TAGAAGGTCAGACACCTGGCATGGTTTATGAGGCCC...GGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR GCA 90 bp | CCATTTGCCAAACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTGGCAGAAAAGTGAGGGCTCTGTaGTCAATACAGGCTCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: PFAKLMVGTGSIQAMVGRKVRAL*SIQAQP Trigger: GGGCTGAGCCTGTATTGAGCACAGAGCCCTCACTTT...TCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGTTTGGCAAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGCATTCAGGCTATGGTTGGCAGATTTGGCAAACTAAAGCATGGGGCCCCTTGTCATATGAGAAATaGCAGTGTACGGGGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GKHSGYGWQIWQTKAWGPLSYEK*QCTGQQ Trigger: CTGCTGCCCCGTACACTGTCATTTCTCATATGACAA...GGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGCATTCAGGCTATGGTTGGCAGATTTGGCAAACTAAAGCATGGGGCCCCGGCATGGTTGTCATATaGGAAATGACAGTGTACGGG | + |
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Preference number: 2 (lower is better) Translates to: GKHSGYGWQIWQTKAWGPGMVVI*EMTVYG Trigger: CCCGTACACTGTCATTTCTCATATGACAACCATGCC...GGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGCATTCAGGCTATGGTTGGCAGATTTGGCAAACTAAAGCATGGGGCCCCAAAGAGCCTGGTACCTaGGAAAGGAAGGGACATTTT | + |
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Preference number: 2 (lower is better) Translates to: GKHSGYGWQIWQTKAWGPKEPGT*ERKGHF Trigger: AAAATGTCCCTTCCTTTCCCAGGTACCAGGCTCTTT...GGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGGTTCCTTTTATGTTAGTGCAAAGATAGGTGCCAAGCTGGGGTCTCAGATGATTGCTGAGCTCCTGTaGTGTGCTAGGTCCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: LGSFYVSAKIGAKLGSQMIAELL*CARSWG Trigger: ACCCCAGGACCTAGCACATCACAGGAGCTCAGCAAT...CATCTGAGACCCCAGCTTGGCACCTATCTTTGCACTAACATAAAAGGAACCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR GCA 90 bp | GACCTAGCTACTATAGTAAGTGTGGTCATCCCTTATGAGATCTATGGGAGCACACGCAATGCAGGAGGGTaGCACGGTCAACTTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: DLATIVSVVIPYEIYGSTRNAGG*HGQLSL Trigger: GAGAGAAAGTTGACCGTGGCACCCTCCTGCATTGCG...TGTGCTCCCATAGATCTCATAAGGGATGACCACACTTACTATAGTAGCTAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGGTTCCTTTTATGTTAGTGCAAAGATAGGTGCCAAGCTGGGGTCTCAGATGCCGATGTGGCCCAGCTaGTCTTTTGTACTTCGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LGSFYVSAKIGAKLGSQMPMWPS*SFVLRK Trigger: CTTTCGAAGTACAAAAGAGCAGCTGGGCCACATCGG...CATCTGAGACCCCAGCTTGGCACCTATCTTTGCACTAACATAAAAGGAACCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR CCA 90 bp | CCATTTGCCAAACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTGGCAGAAACCTGTATTTTATCTaGCAACCTGTCTCAGGACAA | + |
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Preference number: 2 (lower is better) Translates to: PFAKLMVGTGSIQAMVGRNLYFI*QPVSGQ Trigger: TTGTCCTGAGACAGGTTGCCAGATAAAATACAGGTT...TCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGTTTGGCAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR TCA 90 bp | CCATTTGCCAAACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTGGCAGATATCTGTTGTTTCTCTaGAATTCACATTTGCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: PFAKLMVGTGSIQAMVGRYLLFL*NSHLLS Trigger: GCTCAGCAAATGTGAATTTCAGAGAAACAACAGATA...TCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGTTTGGCAAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCATCTGAGAAATTAAATGTTGGAAAAGACAAATCCAGAACTGGTTTCTTTTGGCTCCTCAGGAGCTaGGTCTTAAAGGAGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: LPSEKLNVGKDKSRTGFFWLLRS*VLKEGR Trigger: CCTACCCTCCTTTAAGACTCAGCTCCTGAGGAGCCA...AAAGAAACCAGTTCTGGATTTGTCTTTTCCAACATTTAATTTCTCAGATGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGGTTCCTTTTATGTTAGTGCAAAGATAGGTGCCAAGCTGGGGTCTCAGATGACATTTAAGTGGGGATaGCAGATCTGTAAGCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: LGSFYVSAKIGAKLGSQMTFKWG*QICKQR Trigger: TCTTTGCTTACAGATCTGTCATCCCCACTTAAATGT...CATCTGAGACCCCAGCTTGGCACCTATCTTTGCACTAACATAAAAGGAACCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR CCA 90 bp | ACATTTTCAGAAAGGACATGGTCTTCTACCTTCTGGACTCTAAATTTTGAAGAAGGTCAACTTTCTCTCTaGCGAACTTGCTTCCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: TFSERTWSSTFWTLNFEEGQLSL*RTCFPF Trigger: GAAAGGGAAGCAAGTTCGCCAGAGAGAAAGTTGACC...TTCTTCAAAATTTAGAGTCCAGAAGGTAGAAGACCATGTCCTTTCTGAAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGGTTCCTTTTATGTTAGTGCAAAGATAGGTGCCAAGCTGGGGTCTCAGATGTGGTCTTCTACCTTCTaGACTCTAAATTTTGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LGSFYVSAKIGAKLGSQMWSSTF*TLNFEE Trigger: TTCTTCAAAATTTAGAGTCCAGAAGGTAGAAGACCA...CATCTGAGACCCCAGCTTGGCACCTATCTTTGCACTAACATAAAAGGAACCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCATCTGAGAAATTAAATGTTGGAAAAGACAAATCCAGAACTGGTTTCTTTTGTGGTGAGGTGGTGTaGCTAAAAGCATGGTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: LPSEKLNVGKDKSRTGFFCGEVV*LKAWLK Trigger: TTTTAACCATGCTTTTAGCCACACCACCTCACCACA...AAAGAAACCAGTTCTGGATTTGTCTTTTCCAACATTTAATTTCTCAGATGGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCATCTGAGAAATTAAATGTTGGAAAAGACAAATCCAGAACTGGTTTCTTTTCTTCAATTAGATCATaGGGACTTACTACGGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: LPSEKLNVGKDKSRTGFFSSIRS*GLTTVS Trigger: GCTTACCGTAGTAAGTCCTCATGATCTAATTGAAGA...AAAGAAACCAGTTCTGGATTTGTCTTTTCCAACATTTAATTTCTCAGATGGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR GCA 72 bp | GAAGGGAATTATTTAGCAGGGACCAGTGGGCAGGCATaGACGCACGCACGTAATGAGCTCTCTCAAGTCACG | + |
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Preference number: 3 (lower is better) Translates to: EGNYLAGTSGQA*THARNELSQVT Trigger: CGTGACTTGAGAGAGCTCATTACGTGCGTGCGTGCATGCCTGCCCACTGGTCCCTGCTAAATAATTCCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR TCA 72 bp | AGGGTGTCCAGGATAGTCATGGGCATGGTTGTCATATaGGAAATGACAGTGTACGGGGCAGCAGAGGTGACC | + |
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Preference number: 3 (lower is better) Translates to: RVSRIVMGMVVI*EMTVYGAAEVT Trigger: GGTCACCTCTGCTGCCCCGTACACTGTCATTTCTCATATGACAACCATGCCCATGACTATCCTGGACACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR CCA 72 bp | ACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTaGCAGATTTGGCAAACTAAAGCATGGGGCCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: THGGNGKHSGYG*QIWQTKAWGPS Trigger: ACTGGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR CCA 72 bp | GGGAACGGGAAGCATTCAGGCTATGGTTGGCAGATTTaGCAAACTAAAGCATGGGGCCCCAGTAAATTTGAA | + |
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Preference number: 3 (lower is better) Translates to: GNGKHSGYGWQI*QTKAWGPSKFE Trigger: TTCAAATTTACTGGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTCCCGTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR-3UTR CAA 90 bp | CCATTTGCCAAACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTGGCAGAAGCTCAGTGATGAACTaGGCTTATCTTCAATCTGAA | + |
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Preference number: 3 (lower is better) Translates to: PFAKLMVGTGSIQAMVGRSSVMN*AYLQSE Trigger: TTCAGATTGAAGATAAGCCAAGTTCATCACTGAGCT...TCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGTTTGGCAAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR TCA 72 bp | GATGACAGATCTGTAAGCAAAGACAGTTCACTGTGGTaGGGTGGTGTGGCTAAAAGCATGGTTAAAAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: DDRSVSKDSSLW*GGVAKSMVKRV Trigger: AACCCTTTTAACCATGCTTTTAGCCACACCACCTCACCACAGTGAACTGTCTTTGCTTACAGATCTGTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR CCA 72 bp | TCAGGCTATGGTTGGCAGATTTGGCAAACTAAAGCATaGGGCCCCAGTAAATTTGAATTTCAAATAAACAAC | + |
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Preference number: 3 (lower is better) Translates to: SGYGWQIWQTKA*GPSKFEFQINN Trigger: GTTGTTTATTTGAAATTCAAATTTACTGGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| 3UTR GCA 72 bp | TTTAATACAAGTATGTTTCAAATATTGCACGGTCCATaGCCTAGGAGAGTATCTGTTGTTTCTCTGAAATTC | + |
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Preference number: 3 (lower is better) Translates to: FNTSMFQILHGP*PRRVSVVSLKF Trigger: GAATTTCAGAGAAACAACAGATACTCTCCTAGGGCATGGACCGTGCAATATTTGAAACATACTTGTATTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | GGGAAGCATTCAGGCTATGGTTGGCAGATTTGGCAAACTAAAGCATGGGGCCCCCGCCACCGTCCGCCATaGCTGCGCACCGGGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: GKHSGYGWQIWQTKAWGPRHRPP*LRTGPT Trigger: TGTGGGCCCGGTGCGCAGCCATGGCGGACGGTGGCG...GGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | TTAGGTTCCTTTTATGTTAGTGCAAAGATAGGTGCCAAGCTGGGGTCTCAGATGTGGTTGGGGCGGCGGTaGGGGAGGCCAGCTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: LGSFYVSAKIGAKLGSQMWLGRR*GRPAPD Trigger: GTCTGGAGCTGGCCTCCCCCACCGCCGCCCCAACCA...CATCTGAGACCCCAGCTTGGCACCTATCTTTGCACTAACATAAAAGGAACCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR TCA 90 bp | GGGAAGCATTCAGGCTATGGTTGGCAGATTTGGCAAACTAAAGCATGGGGCCCCGCATTCCCTTCACAGTaGGCAGAGGGAACACAGGGT | + |
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Preference number: 4 (lower is better) Translates to: GKHSGYGWQIWQTKAWGPAFPSQ*AEGTQG Trigger: ACCCTGTGTTCCCTCTGCTCACTGTGAAGGGAATGC...GGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR GCA 90 bp | GACCTAGCTACTATAGTAAGTGTGGTCATCCCTTATGAGATCTATGGGAGCACAACCGTCCGCCATGGCTaGGCACCGGGCCCACAAGGA | + |
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Preference number: 4 (lower is better) Translates to: DLATIVSVVIPYEIYGSTTVRHG*APGPQG Trigger: TCCTTGTGGGCCCGGTGCGCAGCCATGGCGGACGGT...TGTGCTCCCATAGATCTCATAAGGGATGACCACACTTACTATAGTAGCTAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR GCA 90 bp | CCATTTGCCAAACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTGGCAGACGCAATGCAGGAGGGTaGCACGGTCAACTTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: PFAKLMVGTGSIQAMVGRRNAGG*HGQLSL Trigger: GAGAGAAAGTTGACCGTGGCACCCTCCTGCATTGCG...TCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGTTTGGCAAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR GCA 90 bp | GGGAAGCATTCAGGCTATGGTTGGCAGATTTGGCAAACTAAAGCATGGGGCCCCAAAGTGAGGGCTCTGTaGTCAATACAGGCTCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GKHSGYGWQIWQTKAWGPKVRAL*SIQAQP Trigger: GGGCTGAGCCTGTATTGAGCACAGAGCCCTCACTTT...GGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | GGGAAGCATTCAGGCTATGGTTGGCAGATTTGGCAAACTAAAGCATGGGGCCCCTTTGGTAAGCTGGCTTaGTGTCCACGTCAGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GKHSGYGWQIWQTKAWGPFGKLA*CPRQPC Trigger: GCAAGGCTGACGTGGACACCAAGCCAGCTTACCAAA...GGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR GCA 90 bp | CCATTTGCCAAACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTGGCAGATGCCTCAGACCATCGTaGAGTTGGTTGTCGTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: PFAKLMVGTGSIQAMVGRCLRPS*SWLSFA Trigger: AGCAAACGACAACCAACTGCACGATGGTCTGAGGCA...TCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGTTTGGCAAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR TCA 90 bp | GACCTAGCTACTATAGTAAGTGTGGTCATCCCTTATGAGATCTATGGGAGCACATGGCTCCTCAGGAGCTaGGTCTTAAAGGAGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: DLATIVSVVIPYEIYGSTWLLRS*VLKEGR Trigger: CCTACCCTCCTTTAAGACTCAGCTCCTGAGGAGCCA...TGTGCTCCCATAGATCTCATAAGGGATGACCACACTTACTATAGTAGCTAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | ATCTTGAGCTCAGTGATGAACTTGGCTTATCTTCAATCTGAAACTGCACTCTTAAGACCGCGGAGGTTGTaGAAGACGCGGCAGCAACCG | + |
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Preference number: 4 (lower is better) Translates to: ILSSVMNLAYLQSETALLRPRRL*KTRQQP Trigger: CGGTTGCTGCCGCGTCTTCCACAACCTCCGCGGTCT...TAAGAGTGCAGTTTCAGATTGAAGATAAGCCAAGTTCATCACTGAGCTCAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | CCATTTGCCAAACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTGGCAGATTGGTTGTCGTTTGCTaGAGGATTCCATTCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: PFAKLMVGTGSIQAMVGRLVVVC*RIPFLL Trigger: AAGCAGGAATGGAATCCTCCAGCAAACGACAACCAA...TCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGTTTGGCAAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | GGGAAGCATTCAGGCTATGGTTGGCAGATTTGGCAAACTAAAGCATGGGGCCCCTGTGGTGAGGTGGTGTaGCTAAAAGCATGGTTAAAA | + |
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Preference number: 4 (lower is better) Translates to: GKHSGYGWQIWQTKAWGPCGEVV*LKAWLK Trigger: TTTTAACCATGCTTTTAGCCACACCACCTCACCACA...GGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR GCA 90 bp | GACCTAGCTACTATAGTAAGTGTGGTCATCCCTTATGAGATCTATGGGAGCACAGTGTGTTTGGTGTCATaGCCTTGGAAAGGCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: DLATIVSVVIPYEIYGSTVCLVS*PWKGWP Trigger: TGGCCAGCCTTTCCAAGGGCATGACACCAAACACAC...TGTGCTCCCATAGATCTCATAAGGGATGACCACACTTACTATAGTAGCTAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | CCATTTGCCAAACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTGGCAGAATTTTAAAAAGAGCCTaGTACCTGGGAAAGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: PFAKLMVGTGSIQAMVGRILKRA*YLGKEG Trigger: CCCTTCCTTTCCCAGGTACCAGGCTCTTTTTAAAAT...TCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGTTTGGCAAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | GGGAAGCATTCAGGCTATGGTTGGCAGATTTGGCAAACTAAAGCATGGGGCCCCAACCTGTATTTTATCTaGCAACCTGTCTCAGGACAA | + |
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Preference number: 4 (lower is better) Translates to: GKHSGYGWQIWQTKAWGPNLYFI*QPVSGQ Trigger: TTGTCCTGAGACAGGTTGCCAGATAAAATACAGGTT...GGGGCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR GCA 90 bp | TCGTCAGACCTAGCTACTATAGTAAGTGTGGTCATCCCTTATGAGATCTATGGGCCGATGTGGCCCAGCTaGTCTTTTGTACTTCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: SSDLATIVSVVIPYEIYGPMWPS*SFVLRK Trigger: CTTTCGAAGTACAAAAGAGCAGCTGGGCCACATCGG...CCCATAGATCTCATAAGGGATGACCACACTTACTATAGTAGCTAGGTCTGACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR TCA 90 bp | ATCTTGAGCTCAGTGATGAACTTGGCTTATCTTCAATCTGAAACTGCACTCTTATCTGACCTCCCTGACTaGACCACACTCTGCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: ILSSVMNLAYLQSETALLSDLPD*TTLCLR Trigger: TCTGAGGCAGAGTGTGGTTCAGTCAGGGAGGTCAGA...TAAGAGTGCAGTTTCAGATTGAAGATAAGCCAAGTTCATCACTGAGCTCAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR TCA 90 bp | TTAGGTTCCTTTTATGTTAGTGCAAAGATAGGTGCCAAGCTGGGGTCTCAGATGTTGTCATATGAGAAATaGCAGTGTACGGGGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LGSFYVSAKIGAKLGSQMLSYEK*QCTGQQ Trigger: CTGCTGCCCCGTACACTGTCATTTCTCATATGACAA...CATCTGAGACCCCAGCTTGGCACCTATCTTTGCACTAACATAAAAGGAACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR TCA 90 bp | TTAGGTTCCTTTTATGTTAGTGCAAAGATAGGTGCCAAGCTGGGGTCTCAGATGGGCATGGTTGTCATATaGGAAATGACAGTGTACGGG | + |
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Preference number: 4 (lower is better) Translates to: LGSFYVSAKIGAKLGSQMGMVVI*EMTVYG Trigger: CCCGTACACTGTCATTTCTCATATGACAACCATGCC...CATCTGAGACCCCAGCTTGGCACCTATCTTTGCACTAACATAAAAGGAACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR TCA 90 bp | ATCTTGAGCTCAGTGATGAACTTGGCTTATCTTCAATCTGAAACTGCACTCTTAGAGGGTAGGAGTGGTTaGGGGCATTCCCTTCACAGT | + |
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Preference number: 4 (lower is better) Translates to: ILSSVMNLAYLQSETALLEGRSG*GHSLHS Trigger: ACTGTGAAGGGAATGCCCTCAACCACTCCTACCCTC...TAAGAGTGCAGTTTCAGATTGAAGATAAGCCAAGTTCATCACTGAGCTCAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR GCA 90 bp | TCGTCAGACCTAGCTACTATAGTAAGTGTGGTCATCCCTTATGAGATCTATGGGAACAAAGCAAATCCCTaGCCTGGAGGAAGCTCACAT | + |
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Preference number: 4 (lower is better) Translates to: SSDLATIVSVVIPYEIYGNKANP*PGGSSH Trigger: ATGTGAGCTTCCTCCAGGGCAGGGATTTGCTTTGTT...CCCATAGATCTCATAAGGGATGACCACACTTACTATAGTAGCTAGGTCTGACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | TCGTCAGACCTAGCTACTATAGTAAGTGTGGTCATCCCTTATGAGATCTATGGGAGCAAATCCCTGCCCTaGAGGAAGCTCACATTTAAG | + |
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Preference number: 4 (lower is better) Translates to: SSDLATIVSVVIPYEIYGSKSLP*RKLTFK Trigger: CTTAAATGTGAGCTTCCTCCAGGGCAGGGATTTGCT...CCCATAGATCTCATAAGGGATGACCACACTTACTATAGTAGCTAGGTCTGACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | GACCTAGCTACTATAGTAAGTGTGGTCATCCCTTATGAGATCTATGGGAGCACACATTTGCCAAACTCATaGTGGGAACGGGAAGCATTC | + |
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Preference number: 4 (lower is better) Translates to: DLATIVSVVIPYEIYGSTHLPNS*WEREAF Trigger: GAATGCTTCCCGTTCCCACCATGAGTTTGGCAAATG...TGTGCTCCCATAGATCTCATAAGGGATGACCACACTTACTATAGTAGCTAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | CTGCCATCTGAGAAATTAAATGTTGGAAAAGACAAATCCAGAACTGGTTTCTTTTTTAGCAGGGACCAGTaGGCAGGCATGCACGCACGC | + |
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Preference number: 4 (lower is better) Translates to: LPSEKLNVGKDKSRTGFFFSRDQ*AGMHAR Trigger: GCGTGCGTGCATGCCTGCCCACTGGTCCCTGCTAAA...AAAGAAACCAGTTCTGGATTTGTCTTTTCCAACATTTAATTTCTCAGATGGCAG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR TCA 90 bp | TTAGGTTCCTTTTATGTTAGTGCAAAGATAGGTGCCAAGCTGGGGTCTCAGATGACCATGCCAGGTGTCTaGCCTTCTAGAAATATCAGA | + |
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Preference number: 4 (lower is better) Translates to: LGSFYVSAKIGAKLGSQMTMPGV*PSRNIR Trigger: TCTGATATTTCTAGAAGGTCAGACACCTGGCATGGT...CATCTGAGACCCCAGCTTGGCACCTATCTTTGCACTAACATAAAAGGAACCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR TCA 90 bp | ATCTTGAGCTCAGTGATGAACTTGGCTTATCTTCAATCTGAAACTGCACTCTTAGACAGTTCACTGTGGTaGGGTGGTGTGGCTAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: ILSSVMNLAYLQSETALLDSSLW*GGVAKS Trigger: GCTTTTAGCCACACCACCTCACCACAGTGAACTGTC...TAAGAGTGCAGTTTCAGATTGAAGATAAGCCAAGTTCATCACTGAGCTCAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR GCA 90 bp | ACATTTTCAGAAAGGACATGGTCTTCTACCTTCTGGACTCTAAATTTTGAAGAAACCAGTGGGCAGGCATaGACGCACGCACGTAATGAG | + |
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Preference number: 4 (lower is better) Translates to: TFSERTWSSTFWTLNFEETSGQA*THARNE Trigger: CTCATTACGTGCGTGCGTGCATGCCTGCCCACTGGT...TTCTTCAAAATTTAGAGTCCAGAAGGTAGAAGACCATGTCCTTTCTGAAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | GACCTAGCTACTATAGTAAGTGTGGTCATCCCTTATGAGATCTATGGGAGCACATATGGTTGGCAGATTTaGCAAACTAAAGCATGGGGC | + |
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Preference number: 4 (lower is better) Translates to: DLATIVSVVIPYEIYGSTYGWQI*QTKAWG Trigger: GCCCCATGCTTTAGTTTGCCAAATCTGCCAACCATA...TGTGCTCCCATAGATCTCATAAGGGATGACCACACTTACTATAGTAGCTAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | ATCTTGAGCTCAGTGATGAACTTGGCTTATCTTCAATCTGAAACTGCACTCTTAAGACCATCGTGCAGTTaGTTGTCGTTTGCTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: ILSSVMNLAYLQSETALLRPSCS*LSFAGG Trigger: TCCTCCAGCAAACGACAACCAACTGCACGATGGTCT...TAAGAGTGCAGTTTCAGATTGAAGATAAGCCAAGTTCATCACTGAGCTCAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | GACCTAGCTACTATAGTAAGTGTGGTCATCCCTTATGAGATCTATGGGAGCACAAGCTGGGGTCTCAGATaGAGTGATTTTAAATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: DLATIVSVVIPYEIYGSTSWGLR*SDFKSQ Trigger: CTGAGATTTAAAATCACTCCATCTGAGACCCCAGCT...TGTGCTCCCATAGATCTCATAAGGGATGACCACACTTACTATAGTAGCTAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR TCA 90 bp | TCGTCAGACCTAGCTACTATAGTAAGTGTGGTCATCCCTTATGAGATCTATGGGTCTTCAATTAGATCATaGGGACTTACTACGGTAAGC | + |
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Preference number: 4 (lower is better) Translates to: SSDLATIVSVVIPYEIYGSSIRS*GLTTVS Trigger: GCTTACCGTAGTAAGTCCTCATGATCTAATTGAAGA...CCCATAGATCTCATAAGGGATGACCACACTTACTATAGTAGCTAGGTCTGACGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | ATCTTGAGCTCAGTGATGAACTTGGCTTATCTTCAATCTGAAACTGCACTCTTAGGTCAACTTTCTCTCTaGCGAACTTGCTTCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: ILSSVMNLAYLQSETALLGQLSL*RTCFPF Trigger: GAAAGGGAAGCAAGTTCGCCAGAGAGAAAGTTGACC...TAAGAGTGCAGTTTCAGATTGAAGATAAGCCAAGTTCATCACTGAGCTCAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | ATCTTGAGCTCAGTGATGAACTTGGCTTATCTTCAATCTGAAACTGCACTCTTAGAAGCATTCAGGCTATaGTTGGCAGATTTGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: ILSSVMNLAYLQSETALLEAFRL*LADLAN Trigger: GTTTGCCAAATCTGCCAACCATAGCCTGAATGCTTC...TAAGAGTGCAGTTTCAGATTGAAGATAAGCCAAGTTCATCACTGAGCTCAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR GCA 90 bp | CTGCCATCTGAGAAATTAAATGTTGGAAAAGACAAATCCAGAACTGGTTTCTTTCAGTTGGTTGTCGTTTaGTGGAGGATTCCATTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LPSEKLNVGKDKSRTGFFQLVVV*WRIPFL Trigger: CAGGAATGGAATCCTCCAGCAAACGACAACCAACTG...AAAGAAACCAGTTCTGGATTTGTCTTTTCCAACATTTAATTTCTCAGATGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | TCGTCAGACCTAGCTACTATAGTAAGTGTGGTCATCCCTTATGAGATCTATGGGTGGTCTTCTACCTTCTaGACTCTAAATTTTGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SSDLATIVSVVIPYEIYGWSSTF*TLNFEE Trigger: TTCTTCAAAATTTAGAGTCCAGAAGGTAGAAGACCA...CCCATAGATCTCATAAGGGATGACCACACTTACTATAGTAGCTAGGTCTGACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | ACATTTTCAGAAAGGACATGGTCTTCTACCTTCTGGACTCTAAATTTTGAAGAAAAAGAGCCTGGTACCTaGGAAAGGAAGGGACATTTT | + |
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Preference number: 4 (lower is better) Translates to: TFSERTWSSTFWTLNFEEKEPGT*ERKGHF Trigger: AAAATGTCCCTTCCTTTCCCAGGTACCAGGCTCTTT...TTCTTCAAAATTTAGAGTCCAGAAGGTAGAAGACCATGTCCTTTCTGAAAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CCA 90 bp | ATCTTGAGCTCAGTGATGAACTTGGCTTATCTTCAATCTGAAACTGCACTCTTACATTCAGGCTATGGTTaGCAGATTTGGCAAACTAAA | + |
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Preference number: 4 (lower is better) Translates to: ILSSVMNLAYLQSETALLHSGYG*QIWQTK Trigger: TTTAGTTTGCCAAATCTGCCAACCATAGCCTGAATG...TAAGAGTGCAGTTTCAGATTGAAGATAAGCCAAGTTCATCACTGAGCTCAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR TCA 90 bp | ACATTTTCAGAAAGGACATGGTCTTCTACCTTCTGGACTCTAAATTTTGAAGAAACATTTAAGTGGGGATaGCAGATCTGTAAGCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: TFSERTWSSTFWTLNFEETFKWG*QICKQR Trigger: TCTTTGCTTACAGATCTGTCATCCCCACTTAAATGT...TTCTTCAAAATTTAGAGTCCAGAAGGTAGAAGACCATGTCCTTTCTGAAAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR TCA 90 bp | CTGCCATCTGAGAAATTAAATGTTGGAAAAGACAAATCCAGAACTGGTTTCTTTTATCTGTTGTTTCTCTaGAATTCACATTTGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LPSEKLNVGKDKSRTGFFYLLFL*NSHLLS Trigger: GCTCAGCAAATGTGAATTTCAGAGAAACAACAGATA...AAAGAAACCAGTTCTGGATTTGTCTTTTCCAACATTTAATTTCTCAGATGGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS CCA 90 bp | AGCGGCGGAGGTGACGGTGGTGGTGATGGCGGCGGGGCCGGTGGTTaGGGCGGCGGTGGGGGAGGCCAGCTCCAGACCGCGGAGGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: SGGGDGGGDGGGAGG*GGGGGGQLQTAEVV Trigger: CACAACCTCCGCGGTCTGGAGCTGGCCTCCCCCACCGCCGCCCCAACCACCGGCCCCGCCGCCATCACCACCACCGTCACCTCCGCCGCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CAA 90 bp | TTAGGTTCCTTTTATGTTAGTGCAAAGATAGGTGCCAAGCTGGGGTCTCAGATGCAGACCATCGTGCAGTaGGTTGTCGTTTGCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LGSFYVSAKIGAKLGSQMQTIVQ*VVVCWR Trigger: CCTCCAGCAAACGACAACCAACTGCACGATGGTCTG...CATCTGAGACCCCAGCTTGGCACCTATCTTTGCACTAACATAAAAGGAACCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CAA 90 bp | CCATTTGCCAAACTCATGGTGGGAACGGGAAGCATTCAGGCTATGGTTGGCAGAGGCCCAGCTGCTCTTTaGTACTTCGAAAGAAACAAT | + |
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Preference number: 5 (lower is better) Translates to: PFAKLMVGTGSIQAMVGRGPAAL*YFERNN Trigger: ATTGTTTCTTTCGAAGTACAAAAGAGCAGCTGGGCC...TCTGCCAACCATAGCCTGAATGCTTCCCGTTCCCACCATGAGTTTGGCAAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CAA 90 bp | CTGCCATCTGAGAAATTAAATGTTGGAAAAGACAAATCCAGAACTGGTTTCTTTTCCAGACCGCGGAGGTaGTGGAAGACGCGGCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: LPSEKLNVGKDKSRTGFFSRPRR*WKTRQQ Trigger: TTGCTGCCGCGTCTTCCACAACCTCCGCGGTCTGGA...AAAGAAACCAGTTCTGGATTTGTCTTTTCCAACATTTAATTTCTCAGATGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CAA 90 bp | ATCTTGAGCTCAGTGATGAACTTGGCTTATCTTCAATCTGAAACTGCACTCTTAGCAGTTGGTTGTCGTTaGCTGGAGGATTCCATTCCT | + |
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Preference number: 5 (lower is better) Translates to: ILSSVMNLAYLQSETALLAVGCR*LEDSIP Trigger: AGGAATGGAATCCTCCAGCAAACGACAACCAACTGC...TAAGAGTGCAGTTTCAGATTGAAGATAAGCCAAGTTCATCACTGAGCTCAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CAA 90 bp | GACCTAGCTACTATAGTAAGTGTGGTCATCCCTTATGAGATCTATGGGAGCACAGTTAGCATTTTCCATTaGCCAAACTCATGGTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: DLATIVSVVIPYEIYGSTVSIFH*PNSWWE Trigger: TTCCCACCATGAGTTTGGCAAATGGAAAATGCTAAC...TGTGCTCCCATAGATCTCATAAGGGATGACCACACTTACTATAGTAGCTAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CAA 90 bp | ACATTTTCAGAAAGGACATGGTCTTCTACCTTCTGGACTCTAAATTTTGAAGAACCATCGTGCAGTTGGTaGTCGTTTGCTGGAGGATTC | + |
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Preference number: 5 (lower is better) Translates to: TFSERTWSSTFWTLNFEEPSCSW*SFAGGF Trigger: GAATCCTCCAGCAAACGACAACCAACTGCACGATGG...TTCTTCAAAATTTAGAGTCCAGAAGGTAGAAGACCATGTCCTTTCTGAAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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| CDS-3UTR CAA 90 bp | ATCTTGAGCTCAGTGATGAACTTGGCTTATCTTCAATCTGAAACTGCACTCTTAAGCTCAGTGATGAACTaGGCTTATCTTCAATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: ILSSVMNLAYLQSETALLSSVMN*AYLQSE Trigger: TTCAGATTGAAGATAAGCCAAGTTCATCACTGAGCT...TAAGAGTGCAGTTTCAGATTGAAGATAAGCCAAGTTCATCACTGAGCTCAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585477.2 |
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