Pregenerated sensors for BOD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000145919Ensembl transcript IDs: ENST00000285908.5, ENST00000311086.9, ENST00000471339.1, ENST00000480951.1, ENST00000518658.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGACAAAGGTTGCCCTTCACAGACCTGAGGTTTAAGCTTCAGCTGAAGCTTCGGGCACAATGCAGGGGGTaGCACGGTCAACTCTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: RQRLPFTDLRFKLQLKLRAQCRG*HGQLSH Trigger: GTGGGAGAGTTGACCGTGTCACCCCCTGCATTGTGC...CCGAAGCTTCAGCTGAAGCTTAAACCTCAGGTCTGTGAAGGGCAACCTTTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGCAGCATCAGCATCACCTGGCAGCTTGTCAGAAACACTCACTCTTAGGTCCAGTAGATCATGTGTaGTGCACAGAGGCAGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: AWQHQHHLAACQKHSLLGPVDHV*CTEAED Trigger: GTCTTCTGCCTCTGTGCACCACACATGATCTACTGG...ACCTAAGAGTGAGTGTTTCTGACAAGCTGCCAGGTGATGCTGATGCTGCCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGCAGCATCAGCATCACCTGGCAGCTTGTCAGAAACACTCACTCTTAGGTGCCCATGGTCAAGGTTaGAATCTTGAGATCAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: AWQHQHHLAACQKHSLLGAHGQG*NLEISD Trigger: GTCACTGATCTCAAGATTTCAACCTTGACCATGGGC...ACCTAAGAGTGAGTGTTTCTGACAAGCTGCCAGGTGATGCTGATGCTGCCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCAGAGGCCTGGCAGCATCAGCATCACCTGGCAGCTTGTCAGAAACACTCGGTTTAAGCTTCAGCTaGAGCTTCGGAGTAAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: MFRGLAASASPGSLSETLGLSFS*SFGVKV Trigger: TACTTTTACTCCGAAGCTTCAGCTGAAGCTTAAACC...GAGTGTTTCTGACAAGCTGCCAGGTGATGCTGATGCTGCCAGGCCTCTGAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| 3UTR-3UTR GCA 90 bp | ATAGTTCCAAGTTATATGTACCAATCTTCACTGCCAGTAGATCATGTGTGGTGCAGGACAACCCTGGGTTaGTGTAGTGTTTCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: IVPSYMYQSSLPVDHVWCRTTLG*CSVSLS Trigger: AGAGAGAGAAACACTACAGCAACCCAGGGTTGTCCT...GCACCACACATGATCTACTGGCAGTGAAGATTGGTACATATAACTTGGAACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| 3UTR-3UTR CAA 90 bp | ATACAGAGTATGTTCAGAGGCCTGGCAGCATCAGCATCACCTGGCAGCTTGTCAGTCAAGGTTGAAATCTaGAGATCAGTGACGACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: IQSMFRGLAASASPGSLSVKVEI*RSVTTL Trigger: CAAGGTCGTCACTGATCTCAAGATTTCAACCTTGAC...TGACAAGCTGCCAGGTGATGCTGATGCTGCCAGGCCTCTGAACATACTCTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| 3UTR TCA 72 bp | AGGTGCTACTTCTGCACACACAAGGATGACAAACACTaGCACATACCACGGACTACCTCAACTAAAGACCAG | + |
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Preference number: 3 (lower is better) Translates to: RCYFCTHKDDKH*HIPRTTSTKDQ Trigger: CTGGTCTTTAGTTGAGGTAGTCCGTGGTATGTGTCAGTGTTTGTCATCCTTGTGTGTGCAGAAGTAGCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| 3UTR TCA 72 bp | TTAAATCCCCAGGTGCTACTTCTGCACACACAAGGATaGCAAACACTGACACATACCACGGACTACCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: LNPQVLLLHTQG*QTLTHTTDYLN Trigger: GTTGAGGTAGTCCGTGGTATGTGTCAGTGTTTGTCATCCTTGTGTGTGCAGAAGTAGCACCTGGGGATTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| CDS-3UTR GCA 90 bp | GCAGCATCAGCATCACCTGGCAGCTTGTCAGAAACACTCACTCTTAGGTCCCACAGTAGCGCCAGTCGCTaGCCCGGCAGAGGCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: AASASPGSLSETLTLRSHSSASR*PGRGLA Trigger: AGCCAGGCCTCTGCCGGGGCAGCGACTGGCGCTACT...GTGGGACCTAAGAGTGAGTGTTTCTGACAAGCTGCCAGGTGATGCTGATGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| CDS-3UTR TCA 90 bp | ATACAGAGTATGTTCAGAGGCCTGGCAGCATCAGCATCACCTGGCAGCTTGTCAGCACAATGCAGGGGGTaGCACGGTCAACTCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: IQSMFRGLAASASPGSLSAQCRG*HGQLSH Trigger: GTGGGAGAGTTGACCGTGTCACCCCCTGCATTGTGC...TGACAAGCTGCCAGGTGATGCTGATGCTGCCAGGCCTCTGAACATACTCTGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| CDS-3UTR TCA 90 bp | AGTTATATGTACCAATCTTCACTGCCAGTAGATCATGTGTGGTGCACAGAGGCAGGCGAAGGCCCCCTCTaGTACAGCAGAGGTTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SYMYQSSLPVDHVWCTEAGEGPL*YSRGCG Trigger: ACCACAACCTCTGCTGTATCAGAGGGGGCCTTCGCC...TGCCTCTGTGCACCACACATGATCTACTGGCAGTGAAGATTGGTACATATAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| CDS-3UTR GCA 90 bp | ATGTTCAGAGGCCTGGCAGCATCAGCATCACCTGGCAGCTTGTCAGAAACACTCAGGACAACCCTGGGTTaGTGTAGTGTTTCTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: MFRGLAASASPGSLSETLRTTLG*CSVSLS Trigger: AGAGAGAGAAACACTACAGCAACCCAGGGTTGTCCT...GAGTGTTTCTGACAAGCTGCCAGGTGATGCTGATGCTGCCAGGCCTCTGAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| CDS-3UTR TCA 90 bp | AGACAAAGGTTGCCCTTCACAGACCTGAGGTTTAAGCTTCAGCTGAAGCTTCGGAAGGATGACAAACACTaGCACATACCACGGACTACC | + |
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Preference number: 4 (lower is better) Translates to: RQRLPFTDLRFKLQLKLRKDDKH*HIPRTT Trigger: GGTAGTCCGTGGTATGTGTCAGTGTTTGTCATCCTT...CCGAAGCTTCAGCTGAAGCTTAAACCTCAGGTCTGTGAAGGGCAACCTTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| CDS-3UTR GCA 90 bp | ATACAGAGTATGTTCAGAGGCCTGGCAGCATCAGCATCACCTGGCAGCTTGTCAGTAGATCATGTGTGGTaGACAGAGGCAGAAGACAAA | + |
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Preference number: 4 (lower is better) Translates to: IQSMFRGLAASASPGSLSVDHVW*TEAEDK Trigger: TTTGTCTTCTGCCTCTGTGCACCACACATGATCTAC...TGACAAGCTGCCAGGTGATGCTGATGCTGCCAGGCCTCTGAACATACTCTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| CDS-3UTR CCA 90 bp | TCAGAGGCCTGGCAGCATCAGCATCACCTGGCAGCTTGTCAGAAACACTCACTCAGACCATTTCGCAACTaGTTTTTGTTCATCGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: SEAWQHQHHLAACQKHSLRPFRN*FLFIVG Trigger: TCCTACGATGAACAAAAACCAGTTGCGAAATGGTCT...GAGTGAGTGTTTCTGACAAGCTGCCAGGTGATGCTGATGCTGCCAGGCCTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| CDS-3UTR TCA 90 bp | AGGTTGCCCTTCACAGACCTGAGGTTTAAGCTTCAGCTGAAGCTTCGGAGTAAAGCCGCCAGGAACTCATaGATTGCTCGTTCTATTTGT | + |
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Preference number: 4 (lower is better) Translates to: RLPFTDLRFKLQLKLRSKAARNS*IARSIC Trigger: ACAAATAGAACGAGCAATTCATGAGTTCCTGGCGGC...TTTACTCCGAAGCTTCAGCTGAAGCTTAAACCTCAGGTCTGTGAAGGGCAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| CDS-3UTR TCA 90 bp | ATACAGAGTATGTTCAGAGGCCTGGCAGCATCAGCATCACCTGGCAGCTTGTCAGGTTTAAGCTTCAGCTaGAGCTTCGGAGTAAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: IQSMFRGLAASASPGSLSGLSFS*SFGVKV Trigger: TACTTTTACTCCGAAGCTTCAGCTGAAGCTTAAACC...TGACAAGCTGCCAGGTGATGCTGATGCTGCCAGGCCTCTGAACATACTCTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| CDS-3UTR CCA 90 bp | AGTTATATGTACCAATCTTCACTGCCAGTAGATCATGTGTGGTGCACAGAGGCACCAGTAGATCATGTGTaGTGCACAGAGGCAGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: SYMYQSSLPVDHVWCTEAPVDHV*CTEAED Trigger: GTCTTCTGCCTCTGTGCACCACACATGATCTACTGG...TGCCTCTGTGCACCACACATGATCTACTGGCAGTGAAGATTGGTACATATAACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| CDS-3UTR TCA 90 bp | ATAGTTCCAAGTTATATGTACCAATCTTCACTGCCAGTAGATCATGTGTGGTGCGCCCATGGTCAAGGTTaGAATCTTGAGATCAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: IVPSYMYQSSLPVDHVWCAHGQG*NLEISD Trigger: GTCACTGATCTCAAGATTTCAACCTTGACCATGGGC...GCACCACACATGATCTACTGGCAGTGAAGATTGGTACATATAACTTGGAACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| CDS-3UTR CAA 90 bp | TCAGAGGCCTGGCAGCATCAGCATCACCTGGCAGCTTGTCAGAAACACTCACTCCTGATACAGCAGAGGTaGTGGTGGACGCGGCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: SEAWQHQHHLAACQKHSLLIQQR*WWTRQK Trigger: TTTCTGCCGCGTCCACCACAACCTCTGCTGTATCAG...GAGTGAGTGTTTCTGACAAGCTGCCAGGTGATGCTGATGCTGCCAGGCCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| CDS-3UTR CAA 90 bp | AGACAAAGGTTGCCCTTCACAGACCTGAGGTTTAAGCTTCAGCTGAAGCTTCGGGTCAAGGTTGAAATCTaGAGATCAGTGACGACCTTG | + |
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Preference number: 5 (lower is better) Translates to: RQRLPFTDLRFKLQLKLRVKVEI*RSVTTL Trigger: CAAGGTCGTCACTGATCTCAAGATTTCAACCTTGAC...CCGAAGCTTCAGCTGAAGCTTAAACCTCAGGTCTGTGAAGGGCAACCTTTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311086.9 |
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| CDS CCA 72 bp | GCCCCAGTAGCGCCAGTCGCTGCCCCGGCAGAGGCCTaGCTAGTTCCGCCGCCGCCCACCGCGCCAGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: APVAPVAAPAEA*LVPPPPTAPVP Trigger: GGGAACTGGCGCGGTGGGCGGCGGCGGAACTAGCCAGGCCTCTGCCGGGGCAGCGACTGGCGCTACTGGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000285908.5 ENST00000311086.9 ENST00000471339.1 ENST00000480951.1 |
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| CDS GCA 72 bp | CTTCGGGATTCATCTTTAGCCCCAATAAGTGTCACGTaGGAGCCCAATAAATGTCCACCTTCAAAGCTACAG | + |
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Preference number: 6 (lower is better) Translates to: LRDSSLAPISVT*EPNKCPPSKLQ Trigger: CTGTAGCTTTGAAGGTGGACATTTATTGGGCTCGCACGTGACACTTATTGGGGCTAAAGATGAATCCCGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518658.1 |
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