RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BOC (Homo sapiens)

Ensembl gene IDs: ENSG00000144857

Ensembl transcript IDs: ENST00000273395.8, ENST00000355385.7, ENST00000462425.1, ENST00000463971.1, ENST00000464546.5, ENST00000466059.5, ENST00000471963.6, ENST00000473008.1, ENST00000477178.1, ENST00000479182.5, ENST00000484034.1, ENST00000485230.5, ENST00000488486.5, ENST00000494687.5, ENST00000495514.5, ENST00000497495.1, ENST00000498710.1, ENST00000682979.1

Found 988 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTaGCACTGCAGAGGCCCCAGGTTAGGAGTCTGTCCCGCGCCAGCC +
Preference number: 1 (lower is better)
Translates to: SFLLPAYLWASCSLA*HCRGPRLGVCPAPA
Trigger: GGCTGGCGCGGGACAGACTCCTAACCTGGGGCCTCTGCAGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR TCA 90 bp GGAAGGTGTGTGAGCAGTTGGGACAGTGCACCTACAGCCACAGGATaGCCAAGTAGGAAGGCACGGCACGGCCCTGCTCTGGGGCCCACG +
Preference number: 1 (lower is better)
Translates to: GRCVSSWDSAPTATG*PSRKARHGPALGPT
Trigger: CGTGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCCTACTTGGTCATCCTGTGGCTGTAGGTGCACTGTCCCAACTGCTCACACACCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR CCA 90 bp CAGCCACAGGATGACCAAGTAGGAAGGCACGGCACGGCCCTGCTCTaGGGCCCACGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCAC +
Preference number: 1 (lower is better)
Translates to: QPQDDQVGRHGTALL*GPRNSSAMSSSAMH
Trigger: GTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCCTACTTGGTCATCCTGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR GCA 90 bp AGGAAGGCACGGCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTaGCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCTGT +
Preference number: 1 (lower is better)
Translates to: RKARHGPALGPTEQF*HVKFCHALTNSPLC
Trigger: ACAGAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR CCA 90 bp CCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTaGGATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCC +
Preference number: 1 (lower is better)
Translates to: PCPLLFPHARDEPCA*DPSSCQLICGPPAA
Trigger: GGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR TCA 90 bp CCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTaGTACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCAT +
Preference number: 1 (lower is better)
Translates to: PVAPDPAICVGVSRL*YRAPCCSLMLVMNH
Trigger: ATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR GCA 90 bp TTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTaGCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACTGCA +
Preference number: 1 (lower is better)
Translates to: FPHARDEPCAWDPSS*QLICGPPAASPATA
Trigger: TGCAGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR GCA 90 bp ACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTaGCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGG +
Preference number: 1 (lower is better)
Translates to: TGSSHLCGCLQAVIP*PLLFPHARDEPCAW
Trigger: CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR GCA 90 bp ACTACACGTGGCCCTGCCCATGTCTCTTGGTGTCCTGTCTCTCCCTaGTCCGACTGTAACTGTGGTGAGAATGGAGGGAGGGGACTGGAA +
Preference number: 1 (lower is better)
Translates to: TTRGPAHVSWCPVSP*SDCNCGENGGRGLE
Trigger: TTCCAGTCCCCTCCCTCCATTCTCACCACAGTTACAGTCGGAGCAGGGAGAGACAGGACACCAAGAGACATGGGCAGGGCCACGTGTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR CCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTaGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACT +
Preference number: 1 (lower is better)
Translates to: PAPACAVLSWVTPVR*QLLYFPSPTSTGRT
Trigger: AGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR CCA 90 bp CCCAGGTTAGGAGTCTGTCCCGCGCCAGCCTGTGCGGTGCTTTCCTaGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCA +
Preference number: 1 (lower is better)
Translates to: PRLGVCPAPACAVLS*VTPVRWQLLYFPSP
Trigger: TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGGACAGACTCCTAACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR TCA 90 bp TGGGGCCCACGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCACTaGCCAATTCCCCTCTCTGTAGACACTCACTCCAGATACAGCCTC +
Preference number: 1 (lower is better)
Translates to: WGPRNSSAMSSSAMH*PIPLSVDTHSRYSL
Trigger: GAGGCTGTATCTGGAGTGAGTGTCTACAGAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGTGGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR CCA 90 bp CTACTTGGAGTGAGGTTTTCCAAGGGCACAAGGGTCCCCCATCACTaGGCATTACTAGGCAGCTACTGTTCTGATTTGACATTTCTGCAG +
Preference number: 1 (lower is better)
Translates to: LLGVRFSKGTRVPHH*ALLGSYCSDLTFLQ
Trigger: CTGCAGAAATGTCAAATCAGAACAGTAGCTGCCTAGTAATGCCCAGTGATGGGGGACCCTTGTGCCCTTGGAAAACCTCACTCCAAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR TCA 90 bp AAACAATATATAGTCTTTCTGGGATATCAGCTTCTGCCTAAATTGTaGGAGGTGGTGTTTCAAAAGACACACGCACCAGTGGCCCCGGGG +
Preference number: 1 (lower is better)
Translates to: KQYIVFLGYQLLPKL*EVVFQKTHAPVAPG
Trigger: CCCCGGGGCCACTGGTGCGTGTGTCTTTTGAAACACCACCTCTCACAATTTAGGCAGAAGCTGATATCCCAGAAAGACTATATATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
3UTR TCA 90 bp TGGCAACTAGAAACACCTGTCTTGGTAAGGCTCCTCTTCCAGCTATaGCTATGTCAAGTCACTTGGCCTTTACTTTGCTCTGTTGAATCT +
Preference number: 1 (lower is better)
Translates to: WQLETPVLVRLLFQL*LCQVTWPLLCSVES
Trigger: AGATTCAACAGAGCAAAGTAAAGGCCAAGTGACTTGACATAGTCATAGCTGGAAGAGGAGCCTTACCAAGACAGGTGTTTCTAGTTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485230.5
3UTR-3UTR TCA 90 bp CTACGGGGTGCTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACCATGGGGGCCCTGAGTaGAATGGAGGGTCCCACACT +
Preference number: 2 (lower is better)
Translates to: LRGAGDTSLLHSLGRSQDHGGPE*NGGSHT
Trigger: AGTGTGGGACCCTCCATTTCACTCAGGGCCCCCATG...GTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCACCCCGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488486.5
3UTR-3UTR CCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCCAGCTTATCTGTaGGCCTCCTGCAGCCTCGCC +
Preference number: 2 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPLPAYL*ASCSLA
Trigger: GGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAA...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR-3UTR GCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAAGCCTCGCCTGCCACTaGAGAGGCCCCAGGTTAGGA +
Preference number: 2 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVISLACH*RGPRLG
Trigger: TCCTAACCTGGGGCCTCTGCAGTGGCAGGCGAGGCT...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR-3UTR TCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCCGGTGCTTTCCTGGGTaGCTCCTGTTAGGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSRCFPG*LLLGGS
Trigger: GCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCG...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR-3UTR GCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTAGCCTCGCCTGCCACTaGAGAGGCCCCAGGTTAGGA +
Preference number: 2 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCSLACH*RGPRLG
Trigger: TCCTAACCTGGGGCCTCTGCAGTGGCAGGCGAGGCT...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR-3UTR GCA 90 bp CAGCCACAGGATGACCAAGTAGGAAGGCACGGCACGGCCCTGCTCTGGGGCCCATGTCAAGTTCTGCCATaGACTGACCAATTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: QPQDDQVGRHGTALLWGPCQVLP*TDQFPS
Trigger: AGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACA...TGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCCTACTTGGTCATCCTGTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR-3UTR CCA 90 bp CAGCCACAGGATGACCAAGTAGGAAGGCACGGCACGGCCCTGCTCTGGGGCCCAGATACAGCCTCTACTTaGAGTGAGGTTTTCCAAGGG +
Preference number: 2 (lower is better)
Translates to: QPQDDQVGRHGTALLWGPDTAST*SEVFQG
Trigger: CCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATC...TGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCCTACTTGGTCATCCTGTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR-3UTR CCA 90 bp TATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGGCACGGCCCTGCTCTaGGGCCCACGGAACAGTTCT +
Preference number: 2 (lower is better)
Translates to: YNPGLRTMLAPHRETGGQGTALL*GPRNSS
Trigger: AGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCC...TTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR CAA 90 bp TCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTaGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCT +
Preference number: 2 (lower is better)
Translates to: SSHLCGCLQAVIPCP*LFPHARDEPCAWDP
Trigger: AGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR-3UTR TCA 90 bp CGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTGGGTGGAGCCTCTACTTGGAGTaGGGTTTTCCAAGGGCACAA +
Preference number: 2 (lower is better)
Translates to: RTMLAPHRETGGQVWAGWSLYLE*GFPRAQ
Trigger: TTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCT...CCACCCAGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR-3UTR CCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGGATGAACCATGTGCCTaGGATCCTTCCTCTTGCCAG +
Preference number: 2 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLDEPCA*DPSSCQ
Trigger: CTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATC...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR-3UTR TCA 90 bp TATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAACCTACAGCCACAGGATaGCCAAGTAGGAAGGCACGG +
Preference number: 2 (lower is better)
Translates to: YNPGLRTMLAPHRETGGQPTATG*PSRKAR
Trigger: CCGTGCCTTCCTACTTGGTCATCCTGTGGCTGTAGG...TTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR-3UTR TCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCGGTGTCTCCAGGCTGTaGTACCGTGCCCCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIGVSRL*YRAPCC
Trigger: ACAGCAAGGGGCACGGTATCACAGCCTGGAGACACC...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR-3UTR CCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTGTGCGGTGCTTTCCTaGGTGACTCCTGTTAGGTGG +
Preference number: 2 (lower is better)
Translates to: PHARDEPCAWDPSSCQLICAVLS*VTPVRW
Trigger: CCACCTAACAGGAGTCACCCAGGAAAGCACCGCACA...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR-3UTR CCA 90 bp TTTATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAGGGTCCCCCATCACTaGGCATTACTAGGCAGCTAC +
Preference number: 2 (lower is better)
Translates to: FIIQAFGLCLPLTERQEARVPHH*ALLGSY
Trigger: GTAGCTGCCTAGTAATGCCCAGTGATGGGGGACCCT...GGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR-3UTR GCA 90 bp TATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAATGTCCTGTCTCTCCCTaGTCCGACTGTAACTGTGGT +
Preference number: 2 (lower is better)
Translates to: YNPGLRTMLAPHRETGGQCPVSP*SDCNCG
Trigger: ACCACAGTTACAGTCGGAGCAGGGAGAGACAGGACA...TTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCGATGAACCATGTGCCTaGGATCCTTCCTCTTGCCAG +
Preference number: 2 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVDEPCA*DPSSCQ
Trigger: CTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATC...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR-3UTR CCA 90 bp TCTTTCTGGGATATCAGCTTCTGCCTAAATTGTGAGAGGTGGTGTTTCAAAAGAGCCCCTACGGGGTGCTaGGGACACCAGTCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: SFWDISFCLNCERWCFKRAPTGC*GHQSPP
Trigger: TGGAGGAGACTGGTGTCCCCAGCACCCCGTAGGGGC...TCTTTTGAAACACCACCTCTCACAATTTAGGCAGAAGCTGATATCCCAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
3UTR-3UTR CCA 90 bp CACATGGAAATGGAATTTACCAGAATTATTCAGTTGGGAGGGACCTTAGAAGCCAGGTGTGTGAGCAGTTaGGACAGTGCACCTACAGCC +
Preference number: 2 (lower is better)
Translates to: HMEMEFTRIIQLGGTLEARCVSS*DSAPTA
Trigger: GGCTGTAGGTGCACTGTCCCAACTGCTCACACACCT...GGCTTCTAAGGTCCCTCCCAACTGAATAATTCTGGTAAATTCCATTTCCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485230.5
3UTR-3UTR CCA 90 bp GGTAGGACGTCTGTTTACTCACTTCCATCTAGCCTCATACAATGGGTCCTCATAGATACAGCCTCTACTTaGAGTGAGGTTTTCCAAGGG +
Preference number: 2 (lower is better)
Translates to: GRTSVYSLPSSLIQWVLIDTAST*SEVFQG
Trigger: CCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATC...TATGAGGACCCATTGTATGAGGCTAGATGGAAGTGAGTAAACAGACGTCCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
3UTR CAA 90 bp TCCGTCAGTGAGCACATGGAAATGGAATTTACCAGAATTATTCAGTaGGGAGGGACCTTAGAAGCCATTTGGCCCTTGGTTTCCACATGT +
Preference number: 2 (lower is better)
Translates to: SVSEHMEMEFTRIIQ*GGTLEAIWPLVSTC
Trigger: ACATGTGGAAACCAAGGGCCAAATGGCTTCTAAGGTCCCTCCCAACTGAATAATTCTGGTAAATTCCATTTCCATGTGCTCACTGACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485230.5
3UTR-3UTR GCA 90 bp CACATGGAAATGGAATTTACCAGAATTATTCAGTTGGGAGGGACCTTAGAAGCCCCCACGGAACAGTTCTaGCATGTCAAGTTCTGCCAT +
Preference number: 2 (lower is better)
Translates to: HMEMEFTRIIQLGGTLEAPTEQF*HVKFCH
Trigger: ATGGCAGAACTTGACATGGCAGAACTGTTCCGTGGG...GGCTTCTAAGGTCCCTCCCAACTGAATAATTCTGGTAAATTCCATTTCCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485230.5
3UTR-3UTR GCA 90 bp GGTAGGACGTCTGTTTACTCACTTCCATCTAGCCTCATACAATGGGTCCTCATAATCCCTTTATCCCTTTaGCACACAGTTTCCTTTTCA +
Preference number: 2 (lower is better)
Translates to: GRTSVYSLPSSLIQWVLIIPLSL*HTVSFS
Trigger: TGAAAAGGAAACTGTGTGGCAAAGGGATAAAGGGAT...TATGAGGACCCATTGTATGAGGCTAGATGGAAGTGAGTAAACAGACGTCCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
3UTR CCA 72 bp CCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTGGGTaGGCTCTGTCCAGACTACACGTGGCCCTGCCCATG +
Preference number: 3 (lower is better)
Translates to: PHRETGGQVWAG*ALSRLHVALPM
Trigger: CATGGGCAGGGCCACGTGTAGTCTGGACAGAGCCCACCCAGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR GCA 72 bp CGGCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTaGCATGTCAAGTTCTGCCATGCACTGACCAATTCC +
Preference number: 3 (lower is better)
Translates to: RHGPALGPTEQF*HVKFCHALTNS
Trigger: GGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR CCA 72 bp ACGGGGTGCTGGGGACACCAGTCTCCTCCACTCACTTaGCAGGAGTCAGGACTGTCCACCTCTTCAACTGGC +
Preference number: 3 (lower is better)
Translates to: TGCWGHQSPPLT*QESGLSTSSTG
Trigger: GCCAGTTGAAGAGGTGGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCACCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488486.5
3UTR GCA 72 bp GCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTaGCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCT +
Preference number: 3 (lower is better)
Translates to: ARDEPCAWDPSS*QLICGPPAASP
Trigger: AGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR GCA 72 bp GGCCCTGCCCATGTCTCTTGGTGTCCTGTCTCTCCCTaGTCCGACTGTAACTGTGGTGAGAATGGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: GPAHVSWCPVSP*SDCNCGENGGR
Trigger: CCTCCCTCCATTCTCACCACAGTTACAGTCGGAGCAGGGAGAGACAGGACACCAAGAGACATGGGCAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR-3UTR CAA 90 bp AGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCAAGGTGTGTGAGCAGTaGGGACAGTGCACCTACAGC +
Preference number: 3 (lower is better)
Translates to: RPSDYACPSQRDRRPSLGKVCEQ*GQCTYS
Trigger: GCTGTAGGTGCACTGTCCCAACTGCTCACACACCTT...GCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR TCA 72 bp TCTGTCCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTaGCTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCT +
Preference number: 3 (lower is better)
Translates to: SVPRQPVRCFPG*LLLGGSFFIFP
Trigger: AGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR GCA 72 bp AGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTaGCCCTTGCTGTTCCCTCATGCTCGTGATGAACCA +
Preference number: 3 (lower is better)
Translates to: SHLCGCLQAVIP*PLLFPHARDEP
Trigger: TGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR CCA 72 bp GGAGTCTGTCCCGCGCCAGCCTGTGCGGTGCTTTCCTaGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTT +
Preference number: 3 (lower is better)
Translates to: GVCPAPACAVLS*VTPVRWQLLYF
Trigger: AAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGGACAGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR-3UTR CAA 90 bp GGAAGGCACGGCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAAGCTACTGTTCTGATTaGACATTTCTGCAGTTAAGG +
Preference number: 3 (lower is better)
Translates to: GRHGTALLWGPRNSSAMSSYCSD*TFLQLR
Trigger: CCTTAACTGCAGAAATGTCAAATCAGAACAGTAGCT...TGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR CCA 72 bp TTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTaGGATCCTTCCTCTTGCCAGCTTATCTGTGGGCCT +
Preference number: 3 (lower is better)
Translates to: LLFPHARDEPCA*DPSSCQLICGP
Trigger: AGGCCCACAGATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
3UTR TCA 72 bp GTAGACACTCACTCCAGATACAGCCTCTACTTGGAGTaGGGTTTTCCAAGGGCACAAGGGTCCCCCATCACT +
Preference number: 3 (lower is better)
Translates to: VDTHSRYSLYLE*GFPRAQGSPIT
Trigger: AGTGATGGGGGACCCTTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATCTGGAGTGAGTGTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR TCA 72 bp CGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCACTaGCCAATTCCCCTCTCTGTAGACACTCACTCCAGA +
Preference number: 3 (lower is better)
Translates to: RNSSAMSSSAMH*PIPLSVDTHSR
Trigger: TCTGGAGTGAGTGTCTACAGAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR CCA 72 bp GTGAGGTTTTCCAAGGGCACAAGGGTCCCCCATCACTaGGCATTACTAGGCAGCTACTGTTCTGATTTGACA +
Preference number: 3 (lower is better)
Translates to: VRFSKGTRVPHH*ALLGSYCSDLT
Trigger: TGTCAAATCAGAACAGTAGCTGCCTAGTAATGCCCAGTGATGGGGGACCCTTGTGCCCTTGGAAAACCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR-3UTR CAA 90 bp TTTATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAGCTACTGTTCTGATTaGACATTTCTGCAGTTAAGG +
Preference number: 3 (lower is better)
Translates to: FIIQAFGLCLPLTERQEASYCSD*TFLQLR
Trigger: CCTTAACTGCAGAAATGTCAAATCAGAACAGTAGCT...GGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR-3UTR CAA 90 bp ATAAGTATAATGGCAACTAGAAACACCTGTCTTGGTAAGGCTCCTCTTCCAGCTGAAGCCATTTGGCCCTaGGTTTCCACATGTTGGTCT +
Preference number: 3 (lower is better)
Translates to: ISIMATRNTCLGKAPLPAEAIWP*VSTCWS
Trigger: AGACCAACATGTGGAAACCAAGGGCCAAATGGCTTC...AGCTGGAAGAGGAGCCTTACCAAGACAGGTGTTTCTAGTTGCCATTATACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485230.5
3UTR GCA 72 bp TATGTTCTAATATTTATAATCCAGGCCTTCGGACTATaGTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCT +
Preference number: 3 (lower is better)
Translates to: YVLIFIIQAFGL*LPLTERQEAKS
Trigger: AGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATAAATATTAGAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR-3UTR CAA 90 bp ATAAGTATAATGGCAACTAGAAACACCTGTCTTGGTAAGGCTCCTCTTCCAGCTCTCTTGGCATTTTCCTaGGTCCAAACTGTCACCTCA +
Preference number: 3 (lower is better)
Translates to: ISIMATRNTCLGKAPLPALLAFS*VQTVTS
Trigger: TGAGGTGACAGTTTGGACCAAGGAAAATGCCAAGAG...AGCTGGAAGAGGAGCCTTACCAAGACAGGTGTTTCTAGTTGCCATTATACTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
3UTR CCA 72 bp ACCTTAGAAGCCATTTGGCCCTTGGTTTCCACATGTTaGTCTGAGGACCTATGTTCTTTGTCACATAATAGG +
Preference number: 3 (lower is better)
Translates to: TLEAIWPLVSTC*SEDLCSLSHNR
Trigger: CCTATTATGTGACAAAGAACATAGGTCCTCAGACCAACATGTGGAAACCAAGGGCCAAATGGCTTCTAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485230.5
3UTR-3UTR CAA 90 bp CCTTGGTTTCCACATGTTGGTCTGAGGACCTATGTTCTTTGTCACATAATAGGATATCCCTTTATCCCTTaGCCACACAGTTTCCTTTTC +
Preference number: 3 (lower is better)
Translates to: PWFPHVGLRTYVLCHIIGYPFIP*PHSFLF
Trigger: GAAAAGGAAACTGTGTGGCAAAGGGATAAAGGGATA...TCCTATTATGTGACAAAGAACATAGGTCCTCAGACCAACATGTGGAAACCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR GCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTGCCCGGGTAGCCCACTaGAGCCGAGGGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLARVAH*SRGAAP
Trigger: AGGGGCTGCCCCTCGGCTGCAGTGGGCTACCCGGGC...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GCACGGCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAAGTTCGGCACGGCACGGCCCTaGTCTGGGGCCCACGGAACA +
Preference number: 4 (lower is better)
Translates to: ARHGPALGPTEQFCHVKFGTARP*SGAHGT
Trigger: TGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTGCC...GAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTGAGGCGGCCGTGGTCTaGCTGGCTGCTGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLEAAVV*LAAALG
Trigger: CCCCAGAGCAGCAGCCAGCCAGACCACGGCCGCCTC...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGCCACAGGATGACCAAGTAGGAAGGCACGGCACGGCCCTGCTCTGGGGCCCAGCGAGCGGCCGCGGCTaGAGCAACAAAGGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: QPQDDQVGRHGTALLWGPASGRG*SNKGAE
Trigger: CTCGGCTCCTTTGTTGCTCCAGCCGCGGCCGCTCGC...TGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCCTACTTGGTCATCCTGTGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR TCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTGGCTCTCCTCACCCCTaGCTGGCCCACAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLGSPHP*LAHSSR
Trigger: CCTGCTGCTGTGGGCCAGTCAGGGGTGAGGAGAGCC...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GGAGAGCTGCATTCCAGGTTCCTGTCCTACGTAGGCCCCTACGGGGTGCTGGGGGGCTCTCCTCACCCCTaGCTGGCCCACAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GELHSRFLSYVGPYGVLGGSPHP*LAHSSR
Trigger: CCTGCTGCTGTGGGCCAGTCAGGGGTGAGGAGAGCC...CCCCAGCACCCCGTAGGGGCCTACGTAGGACAGGAACCTGGAATGCAGCTCTCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR GCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGGCCCGGGTAGCCCACTaGAGCCGAGGGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLARVAH*SRGAAP
Trigger: AGGGGCTGCCCCTCGGCTGCAGTGGGCTACCCGGGC...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTGTGCCTCCGGGCTTCTaGACGGTGGACGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLVPPGF*TVDAGW
Trigger: CCAGCCTGCGTCCACCGTCCAGAAGCCCGGAGGCAC...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAAGTTCTGCCACAGTGGCTGGCACGCTaGCCACAGCCCCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ARPCSGAHGTVLPCQVLPQWLAR*PQPPQA
Trigger: TGCCTGCGGGGGCTGTGGCCAGCGTGCCAGCCACTG...TGGCAGAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTGGCTGGCTGCTGCTCTaGGGACTGGCTCCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLGWLLL*GLAPGS
Trigger: CGACCCTGGAGCCAGTCCCCAGAGCAGCAGCCAGCC...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCCACGGACAGCCGCGATaGGGGGATGGCGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPHGQPR*GDGAGG
Trigger: GCCACCAGCGCCATCCCCCCATCGCGGCTGTCCGTG...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTAAGGGGCGGCTGTGGTaGGGCCAGAGTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLKGRLW*GQSWGW
Trigger: CCACCCCCAACTCTGGCCCCACCACAGCCGCCCCTT...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTGGCTGTCCACTGGCCTaGTGGCCTGGGAGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLGCPLA*WPGSPP
Trigger: GGGAGGACTCCCAGGCCACCAGGCCAGTGGACAGCC...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTGCAGCGGTAGGTGCCTaGGTCCTCCTCGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLAAVGA*VLLAGG
Trigger: ACCACCAGCGAGGAGGACTCAGGCACCTACCGCTGC...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTCCACCTCTGCCCGGGTAGCCCACTaGAGCCGAGGGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: WGHQSPPLTWQESGLSTSARVAH*SRGAAP
Trigger: AGGGGCTGCCCCTCGGCTGCAGTGGGCTACCCGGGC...AGAGGTGGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR GCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCCCACAGCAGCAGGCTaGTCCTGGCGTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLPTAAG*SWRWQQ
Trigger: CTGCTGCCAACGCCAGGAGCAGCCTGCTGCTGTGGG...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAAGTTCTGCCAGTGCCTCCGGGCTTCTaGACGGTGGACGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARPCSGAHGTVLPCQVLPVPPGF*TVDAGW
Trigger: CCAGCCTGCGTCCACCGTCCAGAAGCCCGGAGGCAC...TGGCAGAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp CGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTGGGTGGGTGCCTCCGGGCTTCTaGACGGTGGACGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RTMLAPHRETGGQVWAGWVPPGF*TVDAGW
Trigger: CCAGCCTGCGTCCACCGTCCAGAAGCCCGGAGGCAC...CCACCCAGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCGGCCCAGGTGACCCGTaGGGGTGGGATTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPGPGDP*GWDSTG
Trigger: GCCAGTGGAATCCCACCCCCACGGGTCACCTGGGCC...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTGAGAGCCGGAGGCGCTaGCTGGAGATGAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLESRRR*LEMRGT
Trigger: TGTGCCCCTCATCTCCAGCCAGCGCCTCCGGCTCTC...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCAAGGGGCGGCTGTGGTaGGGCCAGAGTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPKGRLW*GQSWGW
Trigger: CCACCCCCAACTCTGGCCCCACCACAGCCGCCCCTT...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCGGCTGTCCACTGGCCTaGTGGCCTGGGAGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPGCPLA*WPGSPP
Trigger: GGGAGGACTCCCAGGCCACCAGGCCAGTGGACAGCC...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GCACCAGTGGCCCCGGGGAGAGCTGCATTCCAGGTTCCTGTCCTACGTAGGCCCGGCTGCAGCAGCTCGTaGTCTGGTGACTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: APVAPGRAAFQVPVLRRPGCSSS*SGDFGG
Trigger: ACCCCCAAAGTCACCAGATCACGAGCTGCTGCAGCC...GGGCCTACGTAGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCCACTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR GCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCCATGCAGCGGTAGGTaGCTGAGTCCTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLPCSGR*LSPPRW
Trigger: CCAGCGAGGAGGACTCAGGCACCTACCGCTGCATGG...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCGCCCGGGTAGCCCACTaGAGCCGAGGGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSARVAH*SRGAAP
Trigger: AGGGGCTGCCCCTCGGCTGCAGTGGGCTACCCGGGC...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCAGCTCGCCTGGGCAGTaGTGCTGGGGCTTCATGCCC +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPSSPGQ*CWGFMP
Trigger: GGGCATGAAGCCCCAGCAGCACTGCCCAGGCGAGCT...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCCCCACAGCAGCAGGCTaGTCCTGGCGTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPPTAAG*SWRWQQ
Trigger: CTGCTGCCAACGCCAGGAGCAGCCTGCTGCTGTGGG...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CTACGGGGTGCTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACCCCACAGCAGCAGGCTaGTCCTGGCGTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LRGAGDTSLLHSLGRSQDPTAAG*SWRWQQ
Trigger: CTGCTGCCAACGCCAGGAGCAGCCTGCTGCTGTGGG...GTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCACCCCGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR GCA 90 bp GGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTCGAGGACCGAGAAGTTaGGGGCCGGAGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GLRTMLAPHRETGGQVWARGPRS*GPEREG
Trigger: GCCCTCCCTCTCCGGCCCGCAACTTCTCGGTCCTCG...AGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR CCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAGCCGAGAGGGGGCGCTaGGCTCGCTCTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIAERGR*ARSPPA
Trigger: TGCTGGGGGAGAGCGAGCCCAGCGCCCCCTCTCGGC...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGAGGAAGGGGCGGCTGTaGTGGGGCCAGAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLRKGRL*WGQSWG
Trigger: CCCCCAACTCTGGCCCCACCACAGCCGCCCCTTCCT...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCCACCGGCCGCTCTATaGTTTCAGGAAGGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLPPAAL*FQEGAA
Trigger: AGCCGCCCCTTCCTGAAACCATAGAGCGGCCGGTGG...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCCTCCTCACCCCTGACTaGCCCACAGCAGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPLLTPD*PTAAGC
Trigger: GCAGCCTGCTGCTGTGGGCCAGTCAGGGGTGAGGAG...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp ACACACGCACCAGTGGCCCCGGGGAGAGCTGCATTCCAGGTTCCTGTCCTACGTGCCCCTACGGGGTGCTaGGGACACCAGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: THAPVAPGRAAFQVPVLRAPTGC*GHQSPP
Trigger: TGGAGGAGACTGGTGTCCCCAGCACCCCGTAGGGGC...ACGTAGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCCACTGGTGCGTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR TCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCGCTGGTGGTGTCGATaGGGAGGTTGCTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLRWWCR*GGCSAG
Trigger: TCCTGCTGAGCAACCTCCTCATCGACACCACCAGCG...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGGGACATTGTAGAGGATaGCCGCTGCCCCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLGHCRG*PLPRAA
Trigger: GGCAGCCCGGGGCAGCGGTCATCCTCTACAATGTCC...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCCTTTCTCTAGGCCCGTaGTCTCCACGGACAGCCGCG +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPLSLGP*SPRTAA
Trigger: CGCGGCTGTCCGTGGAGATCACGGGCCTAGAGAAAG...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCGTGTCACTCTGCTGCTaGAGCTCGCCTGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPVSLCC*SSPGQC
Trigger: GCACTGCCCAGGCGAGCTTCAGCAGCAGAGTGACAC...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GGGGTGCTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTCGTGTCACTCTGCTGCTaGAGCTCGCCTGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GVLGTPVSSTHLAGVRTVVSLCC*SSPGQC
Trigger: GCACTGCCCAGGCGAGCTTCAGCAGCAGAGTGACAC...GACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR TCA 90 bp ACACACGCACCAGTGGCCCCGGGGAGAGCTGCATTCCAGGTTCCTGTCCTACGTGCATGGGGGCCCTCGTaGTCTGGTGACTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: THAPVAPGRAAFQVPVLRAWGPS*SGDFGG
Trigger: ACCCCCAAAGTCACCAGATCACGAGGGCCCCCATGC...ACGTAGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCCACTGGTGCGTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000473008.1
CDS-3UTR TCA 90 bp TGCTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTCCACCCGTTGGCAGCAGTCGTaGTGGGGCTGCAGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: CWGHQSPPLTWQESGLSTRWQQS*WGCSSS
Trigger: CGAGCTGCTGCAGCCCCATCACGACTGCTGCCAACG...GGTGGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR GCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAACCGCTGCCCCGGGCTaGCCAACCCCATTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVITAAPG*PTPLSA
Trigger: GGCCGACAATGGGGTTGGGCAGCCCGGGGCAGCGGT...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGACCGCTGCCCCGGGCTaGCCAACCCCATTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWTAAPG*PTPLSA
Trigger: GGCCGACAATGGGGTTGGGCAGCCCGGGGCAGCGGT...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGGGTCTGGCTGGCTGCTaGTCTGGGGACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLGLAGC*SGDWLQ
Trigger: CTGGAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACC...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CGGGGTGCTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTGGCCCCGGGGAGAGCTaGATTCCAGGTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RGAGDTSLLHSLGRSQDCGPGES*IPGSCP
Trigger: AGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCC...ACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR GCA 90 bp GGGGTGCTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTCGGCCCCGGGGAGAGCTaGATTCCAGGTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GVLGTPVSSTHLAGVRTVGPGES*IPGSCP
Trigger: AGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCC...GACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR GCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTGTTCTGAAACTCTGCTaGAGCCGGCGCCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLVLKLC*SRRLGR
Trigger: CCTTCCCAGGCGCCGGCTGCAGCAGAGTTTCAGAAC...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495514.5
CDS-3UTR CCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGGAGAGCCGGAGGCGCTaGCTGGAGATGAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLESRRR*LEMRGT
Trigger: TGTGCCCCTCATCTCCAGCCAGCGCCTCCGGCTCTC...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAGAGGCGGCCGTGGTCTaGCTGGCTGCTGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIEAAVV*LAAALG
Trigger: CCCCAGAGCAGCAGCCAGCCAGACCACGGCCGCCTC...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGCGGAGGCCGTGGAGATaGTGGGCCTGTCGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLRRPWR*WACREL
Trigger: AAGCTCCCGACAGGCCCACCATCTCCACGGCCTCCG...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGCACGGACAGCCGCGATaGGGGGATGGCGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWHGQPR*GDGAGG
Trigger: GCCACCAGCGCCATCCCCCCATCGCGGCTGTCCGTG...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCGAGAGGGGGCGCTaGGCTCGCTCTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCAERGR*ARSPPA
Trigger: TGCTGGGGGAGAGCGAGCCCAGCGCCCCCTCTCGGC...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTGGCAGTCGACCAGGCTaGCCAGAAGACTTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLGSRPG*PEDFRA
Trigger: AGCTCGGAAGTCTTCTGGCCAGCCTGGTCGACTGCC...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCCCACCGGCCGCTCTATaGTTTCAGGAAGGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPPPAAL*FQEGAA
Trigger: AGCCGCCCCTTCCTGAAACCATAGAGCGGCCGGTGG...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTGGAGCGAGCCACCATaGCCCCAGTGCCCACCGGCC +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSWSEPP*PQCPPA
Trigger: GGCCGGTGGGCACTGGGGCCATGGTGGCTCGCTCCA...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATATGGAGCGAGCCACCATaGCCCCAGTGCCCACCGGCC +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIWSEPP*PQCPPA
Trigger: GGCCGGTGGGCACTGGGGCCATGGTGGCTCGCTCCA...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GCACCAGTGGCCCCGGGGAGAGCTGCATTCCAGGTTCCTGTCCTACGTAGGCCCGCCTCAGCAGGCTGCTaGTGTCACTCTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: APVAPGRAAFQVPVLRRPASAGC*CHSAAE
Trigger: TTCAGCAGCAGAGTGACACCAGCAGCCTGCTGAGGC...GGGCCTACGTAGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCCACTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR CCA 90 bp CACGGCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAAGTTCTGGAGGGACCGCACCATaGCAGGGAGGCAAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HGTALLWGPRNSSAMSSSGGTAP*QGGKGA
Trigger: TGCTCCTTTGCCTCCCTGCCATGGTGCGGTCCCTCC...AGAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp GGAAGGCACGGCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAAAGAGGCAGCATGAATaGTGGGGGCTTCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRHGTALLWGPRNSSAMSKRQHE*WGLQGG
Trigger: CCCACCCTGAAGCCCCCACCATTCATGCTGCCTCTT...TGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp CGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTGGGTGGACAGGAGGCCAAGTCTaGGCTGGGTGGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RTMLAPHRETGGQVWAGWTGGQV*AGWALS
Trigger: GGACAGAGCCCACCCAGCCCAGACTTGGCCTCCTGT...CCACCCAGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR TCA 90 bp GCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAAGTTCTGCCAGGAGGCAAGCCAGTGTaGCCTCAGGCCTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: ARPCSGAHGTVLPCQVLPGGKPV*PQASFL
Trigger: GAGGAATGAGGCCTGAGGTCACACTGGCTTGCCTCC...TGGCAGAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR TCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGGCTCTCCTCACCCCTaGCTGGCCCACAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWGSPHP*LAHSSR
Trigger: CCTGCTGCTGTGGGCCAGTCAGGGGTGAGGAGAGCC...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GGACTGTCCACCTCTTCAACTGGCACAAGGCCCAAGCAGCATGGGGGCCCTGAGCATGGGGGCCCTGAGTaGAATGGAGGGTCCCACACT +
Preference number: 4 (lower is better)
Translates to: GLSTSSTGTRPKQHGGPEHGGPE*NGGSHT
Trigger: AGTGTGGGACCCTCCATTTCACTCAGGGCCCCCATG...CTCAGGGCCCCCATGCTGCTTGGGCCTTGTGCCAGTTGAAGAGGTGGACAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR TCA 90 bp TGCTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTCCACCGCAGCATGGGGGCCCTaGGTGAAATGGAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: CWGHQSPPLTWQESGLSTAAWGP*VKWRVP
Trigger: TGGGACCCTCCATTTCACTCAGGGCCCCCATGCTGC...GGTGGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR TCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCCGGTGCTTTCCTGGGTaGCTCCTGTTAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPRCFPG*LLLGGS
Trigger: GCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCG...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGCCATGCAGCGGTAGGTaGCTGAGTCCTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLPCSGR*LSPPRW
Trigger: CCAGCGAGGAGGACTCAGGCACCTACCGCTGCATGG...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCGTAGAGGATGACCGCTaGCCCGGGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSVEDDR*PGLPNP
Trigger: GGGGTTGGGCAGCCCGGGGCAGCGGTCATCCTCTAC...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAGTAGAGGATGACCGCTaGCCCGGGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIVEDDR*PGLPNP
Trigger: GGGGTTGGGCAGCCCGGGGCAGCGGTCATCCTCTAC...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATATCGGCGGGAGCCCCCTaGCCCTTCTCTCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVISAGAP*PFSPGH
Trigger: GTGTCCAGGAGAGAAGGGGCAGGGGGCTCCCGCCGA...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACGGCCACTGCCCTCATaGCGAGGCCGCCACACCAGT +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIRPLPS*RGRHTS
Trigger: ACTGGTGTGGCGGCCTCGGCATGAGGGCAGTGGCCG...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGCGGCCACTGCCCTCATaGCGAGGCCGCCACACCAGT +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWRPLPS*RGRHTS
Trigger: ACTGGTGTGGCGGCCTCGGCATGAGGGCAGTGGCCG...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCACCATGGCCCCAGTaGCCACCGGCCGCTCTATGG +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIPPWPQ*PPAALW
Trigger: CCATAGAGCGGCCGGTGGGCACTGGGGCCATGGTGG...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTCCACCTCTGCTGCTGGGGCTTCATaGCCGGGTAGCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: WGHQSPPLTWQESGLSTSAAGAS*PGSPLQ
Trigger: CTGCAGTGGGCTACCCGGGCATGAAGCCCCAGCAGC...AGAGGTGGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR GCA 90 bp GCAGGAGTCAGGACTGTCCACCTCTTCAACTGGCACAAGGCCCAAGCAGCATGGAGCTCGCCTGGGCAGTaGTGCTGGGGCTTCATGCCC +
Preference number: 4 (lower is better)
Translates to: AGVRTVHLFNWHKAQAAWSSPGQ*CWGFMP
Trigger: GGGCATGAAGCCCCAGCAGCACTGCCCAGGCGAGCT...CCATGCTGCTTGGGCCTTGTGCCAGTTGAAGAGGTGGACAGTCCTGACTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR GCA 90 bp CCCTACGGGGTGCTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGTCTGCCTCAGCAGGCTaGTGGTGTCACTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PYGVLGTPVSSTHLAGVRSASAG*WCHSAA
Trigger: AGCAGCAGAGTGACACCAGCAGCCTGCTGAGGCAGA...CCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCACCCCGTAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR GCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGTATCTGTGGGCCTCCTaGAGCCTCGCCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLYLWAS*SLACHC
Trigger: GCAGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATA...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CAGCCACAGGATGACCAAGTAGGAAGGCACGGCACGGCCCTGCTCTGGGGCCCACCTTCGGACTATGCTTaGCCCTCACAGAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: QPQDDQVGRHGTALLWGPPSDYA*PSQRDR
Trigger: CCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGG...TGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCCTACTTGGTCATCCTGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR GCA 90 bp CAGCCACAGGATGACCAAGTAGGAAGGCACGGCACGGCCCTGCTCTGGGGCCCACAGGCCTTCGGACTATaGTTGCCCCTCACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: QPQDDQVGRHGTALLWGPQAFGL*LPLTER
Trigger: TCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTG...TGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCCTACTTGGTCATCCTGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR GCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGCGAGGACCGAGAAGTTaGGGGCCGGAGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWRGPRS*GPEREG
Trigger: GCCCTCCCTCTCCGGCCCGCAACTTCTCGGTCCTCG...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495514.5
CDS-3UTR CCA 90 bp CGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTGGGTGGTGGCTAGTGTCACAGTaGCTGGCACGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RTMLAPHRETGGQVWAGWWLVSQ*LARWPQ
Trigger: CTGTGGCCAGCGTGCCAGCCACTGTGACACTAGCCA...CCACCCAGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAGGCCCAGGTGACCCGTaGGGGTGGGATTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIGPGDP*GWDSTG
Trigger: GCCAGTGGAATCCCACCCCCACGGGTCACCTGGGCC...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCAGGGGATGACCAGCTaGGATAGCTCCATGGTGACC +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLQGMTS*DSSMVT
Trigger: GGTCACCATGGAGCTATCCCAGCTGGTCATCCCCTG...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCCACATAGTAGAGGATTaGCGCCCGGCCACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPHIVED*RPATAL
Trigger: GAGGGCAGTGGCCGGGCGCCAATCCTCTACTATGTG...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGGGGGGATGGCGCTGGTaGCCAGAATCCAGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLGGWRW*PESSLP
Trigger: TGGGAGACTGGATTCTGGCCACCAGCGCCATCCCCC...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCGCCGAGAGGGGGCGCTaGGCTCGCTCTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIAERGR*ARSPPA
Trigger: TGCTGGGGGAGAGCGAGCCCAGCGCCCCCTCTCGGC...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCGGCAGTCGACCAGGCTaGCCAGAAGACTTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPGSRPG*PEDFRA
Trigger: AGCTCGGAAGTCTTCTGGCCAGCCTGGTCGACTGCC...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAGGCCAGAGTTGGGGGTaGCAGTCGACCAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIGQSWG*QSTRLA
Trigger: GGCCAGCCTGGTCGACTGCCACCCCCAACTCTGGCC...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCGGCCAGAGTTGGGGGTaGCAGTCGACCAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSGQSWG*QSTRLA
Trigger: GGCCAGCCTGGTCGACTGCCACCCCCAACTCTGGCC...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGGCTGTCCACTGGCCTaGTGGCCTGGGAGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWGCPLA*WPGSPP
Trigger: GGGAGGACTCCCAGGCCACCAGGCCAGTGGACAGCC...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GCAGGAGTCAGGACTGTCCACCTCTTCAACTGGCACAAGGCCCAAGCAGCATGGGCCCCTACGGGGTGCTaGGGACACCAGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGVRTVHLFNWHKAQAAWAPTGC*GHQSPP
Trigger: TGGAGGAGACTGGTGTCCCCAGCACCCCGTAGGGGC...CCATGCTGCTTGGGCCTTGTGCCAGTTGAAGAGGTGGACAGTCCTGACTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR CCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGAGACACACGCACCAGTaGCCCCGGGGAGAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLRHTHQ*PRGELH
Trigger: ATGCAGCTCTCCCCGGGGCCACTGGTGCGTGTGTCT...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AAGACACACGCACCAGTGGCCCCGGGGAGAGCTGCATTCCAGGTTCCTGTCCTAAGACACACGCACCAGTaGCCCCGGGGAGAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: KTHAPVAPGRAAFQVPVLRHTHQ*PRGELH
Trigger: ATGCAGCTCTCCCCGGGGCCACTGGTGCGTGTGTCT...TAGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCCACTGGTGCGTGTGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR CCA 90 bp GGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTGGAGGGACCGCACCATaGCAGGGAGGCAAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GLRTMLAPHRETGGQVWAGGTAP*QGGKGA
Trigger: TGCTCCTTTGCCTCCCTGCCATGGTGCGGTCCCTCC...AGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp TTTATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCCGGGGGCCAGCGTGGTaGGCGCGAGGGAGCCACACA +
Preference number: 4 (lower is better)
Translates to: FIIQAFGLCLPLTERQEARGPAW*ARGSHT
Trigger: TGTGTGGCTCCCTCGCGCCCACCACGCTGGCCCCCG...GGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR TCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAGGACATTGTAGAGGATaGCCGCTGCCCCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIGHCRG*PLPRAA
Trigger: GGCAGCCCGGGGCAGCGGTCATCCTCTACAATGTCC...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCCGGGGTCAAGTCTGGTaGGGGTCAGGCGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSRGQVW*GSGGAG
Trigger: ACCAGCACCGCCTGACCCTCACCAGACTTGACCCCG...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCCTGGCTGCAGGTGGCTaGTGGAGTGCCAGTACTTGT +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPLAAGG*WSASTC
Trigger: ACAAGTACTGGCACTCCATCAGCCACCTGCAGCCAG...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGGCTCTCCTCACCCCTaGCTGGCCCACAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCGSPHP*LAHSSR
Trigger: CCTGCTGCTGTGGGCCAGTCAGGGGTGAGGAGAGCC...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTAGCCCAAGATCACAGTaGCTCCGGGCTTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: GLRTMLAPHRETGGQVWASPRSQ*LRASGR
Trigger: CCGTCCAGAAGCCCGGAGGCACTGTGATCTTGGGCT...AGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR GCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCCTGCACACTTGTACATaGCCTCGTCCTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPLHTCT*PRPPGW
Trigger: CCAGCCAGGAGGACGAGGGCATGTACAAGTGTGCAG...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGCCCCATTGTCGGCCATaGAGCGGTAGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLPHCRP*SGRCLS
Trigger: ACTCAGGCACCTACCGCTGCATGGCCGACAATGGGG...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTTGGCGCCCGGCCACTaGCCTCATGCCGAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVLAPGH*PHAEAA
Trigger: GGCGGCCTCGGCATGAGGGCAGTGGCCGGGCGCCAA...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTCCACCATGGCCCCAGTaGCCACCGGCCGCTCTATGG +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCPPWPQ*PPAALW
Trigger: CCATAGAGCGGCCGGTGGGCACTGGGGCCATGGTGG...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAAGCTCGCCTGGGCAGTaGTGCTGGGGCTTCATGCCC +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVISSPGQ*CWGFMP
Trigger: GGGCATGAAGCCCCAGCAGCACTGCCCAGGCGAGCT...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GGGGTGCTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTCTCTGCCTCAGCAGGCTaGTGGTGTCACTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GVLGTPVSSTHLAGVRTVSASAG*WCHSAA
Trigger: AGCAGCAGAGTGACACCAGCAGCCTGCTGAGGCAGA...GACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR GCA 90 bp CTACGGGGTGCTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACTTGCCAAGATGGGTCTaGCTCAGCAGGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LRGAGDTSLLHSLGRSQDLPRWV*LSRLLV
Trigger: CACCAGCAGCCTGCTGAGGCAGACCCATCTTGGCAA...GTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCACCCCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR GCA 90 bp AGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCGTTCTGAAACTCTGCTaGAGCCGGCGCCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RPSDYACPSQRDRRPSLGVLKLC*SRRLGR
Trigger: CCTTCCCAGGCGCCGGCTGCAGCAGAGTTTCAGAAC...GCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR CCA 90 bp CAGCCACAGGATGACCAAGTAGGAAGGCACGGCACGGCCCTGCTCTGGGGCCCAGGTTACATTCATCCTTaGAGGTTCCACCACGCAGCC +
Preference number: 4 (lower is better)
Translates to: QPQDDQVGRHGTALLWGPGYIHP*RFHHAA
Trigger: GGCTGCGTGGTGGAACCTCCAAGGATGAATGTAACC...TGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCCTACTTGGTCATCCTGTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp CACGGCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAAGTTCTATGACGAGGGTCCCGTaGGTGATGAGGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: HGTALLWGPRNSSAMSSSMTRVP*VMRTPR
Trigger: TCTGGGTGTCCTCATCACCCACGGGACCCTCGTCAT...AGAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGATCCGGGCCACACACTaGTACCGTCCCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLIRATH*YRPTVW
Trigger: CCACACTGTGGGACGGTACCAGTGTGTGGCCCGGAT...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCACGTAGCCTGTCGCTaGAGCCGGAGGTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLHVACR*SRRFSL
Trigger: AAGTGAAAACCTCCGGCTCCAGCGACAGGCTACGTG...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGGCCCAGGTGACCCGTaGGGGTGGGATTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCGPGDP*GWDSTG
Trigger: GCCAGTGGAATCCCACCCCCACGGGTCACCTGGGCC...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGAGCTGGACTACGGCATaGGCGCTCCCAACCTCGTTC +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLSWTTA*ALPTSF
Trigger: GAACGAGGTTGGGAGCGCCCATGCCGTAGTCCAGCT...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCGGGTTATGCTTGGCCTaGAGGTCCGCAGCTGGACTA +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPGLCLA*RSAAGL
Trigger: TAGTCCAGCTGCGGACCTCCAGGCCAAGCATAACCC...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGAGGGTCAGGCGGTGCTaGTTGGCTGGAATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLRVRRC*LAGMPE
Trigger: CTCTGGCATTCCAGCCAACCAGCACCGCCTGACCCT...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTCGGCCGTGGTCTGGCTaGCTGCTGCTCTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCRPWSG*LLLWGL
Trigger: CAGTCCCCAGAGCAGCAGCCAGCCAGACCACGGCCG...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTACGGAAGGACTGGATTaGGAACCCACCATTCCCACG +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLTEGLD*EPTIPT
Trigger: CGTGGGAATGGTGGGTTCCCAATCCAGTCCTTCCGT...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGTGGTGGGGCCAGAGTTaGGGGTGGCAGTCGACCAGG +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWWWGQS*GWQSTR
Trigger: CCTGGTCGACTGCCACCCCCAACTCTGGCCCCACCA...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATAGGGCAGGTCGCTaGAGCGAGCCACCATGGCCC +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWDRAGR*SEPPWP
Trigger: GGGCCATGGTGGCTCGCTCCAGCGACCTGCCCTATC...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CACACGCACCAGTGGCCCCGGGGAGAGCTGCATTCCAGGTTCCTGTCCTACGTAGCCTCAGCAGGCTGCTaGTGTCACTCTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: HTHQWPRGELHSRFLSYVASAGC*CHSAAE
Trigger: TTCAGCAGCAGAGTGACACCAGCAGCCTGCTGAGGC...TACGTAGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCCACTGGTGCGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR CCA 90 bp GGAGAGCTGCATTCCAGGTTCCTGTCCTACGTAGGCCCCTACGGGGTGCTGGGGTCTCCTCCACTCACTTaGCAGGAGTCAGGACTGTCC +
Preference number: 4 (lower is better)
Translates to: GELHSRFLSYVGPYGVLGSPPLT*QESGLS
Trigger: GGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGA...CCCCAGCACCCCGTAGGGGCCTACGTAGGACAGGAACCTGGAATGCAGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR CCA 90 bp CGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTGGGTGGAAGAGGCAGCATGAATaGTGGGGGCTTCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RTMLAPHRETGGQVWAGWKRQHE*WGLQGG
Trigger: CCCACCCTGAAGCCCCCACCATTCATGCTGCCTCTT...CCACCCAGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp GCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAAGTTCTGCCACAAGTCTGGGCTGGGTaGGCTCTGTCCAGACTACAC +
Preference number: 4 (lower is better)
Translates to: ARPCSGAHGTVLPCQVLPQVWAG*ALSRLH
Trigger: GTGTAGTCTGGACAGAGCCCACCCAGCCCAGACTTG...TGGCAGAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR TCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGGACATTGTAGAGGATaGCCGCTGCCCCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCGHCRG*PLPRAA
Trigger: GGCAGCCCGGGGCAGCGGTCATCCTCTACAATGTCC...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTGGCCCCAGGGGATaGCCAGCTGGGATAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSSGPRG*PAGIAP
Trigger: TGGAGCTATCCCAGCTGGTCATCCCCTGGGGCCAGA...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGGCCGAGTTTGGAGGGTaGTACAGGAGGTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLAEFGG*YRRCAS
Trigger: ACTGGCACACCTCCTGTATCACCCTCCAAACTCGGC...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCCCAGGTCACGTACACTaGGGTCTCGGAGGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSPGHVH*GLGGRG
Trigger: TCCACGGCCTCCGAGACCTCAGTGTACGTGACCTGG...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCCTTTCTCTAGGCCCGTaGTCTCCACGGACAGCCGCG +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSLSLGP*SPRTAA
Trigger: CGCGGCTGTCCGTGGAGATCACGGGCCTAGAGAAAG...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTAGATCATCACGTTGCTaGACTCGCTCTCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLRSSRC*TRSPLL
Trigger: AAGGAGGGGAGAGCGAGTTCAGCAACGTGATGATCT...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCCCCCTCGTGATCTGGTaGCTTTGGGGGTCATATCCA +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPPLVIW*LWGSYP
Trigger: TGGATATGACCCCCAAAGTCACCAGATCACGAGGGG...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
60% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCGCAGCATGGGGGCCCTaGGTGAAATGGAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSAAWGP*VKWRVP
Trigger: TGGGACCCTCCATTTCACTCAGGGCCCCCATGCTGC...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CACACGCACCAGTGGCCCCGGGGAGAGCTGCATTCCAGGTTCCTGTCCTACGTAGCCCTCGTGATCTGGTaGCTTTGGGGGTCATATCCA +
Preference number: 4 (lower is better)
Translates to: HTHQWPRGELHSRFLSYVALVIW*LWGSYP
Trigger: TGGATATGACCCCCAAAGTCACCAGATCACGAGGGC...TACGTAGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCCACTGGTGCGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473008.1
CDS-3UTR TCA 90 bp CAGCCACAGGATGACCAAGTAGGAAGGCACGGCACGGCCCTGCTCTGGGGCCCAAGCCTCTACTTGGAGTaGGGTTTTCCAAGGGCACAA +
Preference number: 4 (lower is better)
Translates to: QPQDDQVGRHGTALLWGPSLYLE*GFPRAQ
Trigger: TTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCT...TGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCCTACTTGGTCATCCTGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR GCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTAAACTCTTTCACCTTTaGCCCAGCCCCTCAGACACC +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLKLFHL*PSPSDT
Trigger: GGTGTCTGAGGGGCTGGGGCAAAGGTGAAAGAGTTT...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273395.8
ENST00000355385.7
CDS-3UTR GCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCACTGGGTTGTAGGCTaGACACTTGTACATGCCCTC +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLHWVVG*TLVHAL
Trigger: GAGGGCATGTACAAGTGTGCAGCCTACAACCCAGTG...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGCCTCGTTCTCGGCCATaGACTGGTAGACGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLPRSRP*TGRRLR
Trigger: ACGAAGGCGTCTACCAGTGCATGGCCGAGAACGAGG...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTTGGCGCCCGGCCACTaGCCTCATGCCGAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAILAPGH*PHAEAA
Trigger: GGCGGCCTCGGCATGAGGGCAGTGGCCGGGCGCCAA...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CCCTACGGGGTGCTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGGGGGGTCATATCCATTaGCAAGATGGGTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PYGVLGTPVSSTHLAGVRGGHIH*QDGSAS
Trigger: TGAGGCAGACCCATCTTGGCAATGGATATGACCCCC...CCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCACCCCGTAGGG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR GCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCGGCCCCGGGGAGAGCTaGATTCCAGGTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSGPGES*IPGSCP
Trigger: AGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCC...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CAGCCACAGGATGACCAAGTAGGAAGGCACGGCACGGCCCTGCTCTGGGGCCCACCCACGGAACAGTTCTaGCATGTCAAGTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: QPQDDQVGRHGTALLWGPPTEQF*HVKFCH
Trigger: ATGGCAGAACTTGACATGGCAGAACTGTTCCGTGGG...TGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCCTACTTGGTCATCCTGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR GCA 90 bp GGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTTGTGCGCGCCGTGTGTaGGCGTGTGTGTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: GLRTMLAPHRETGGQVWACARRV*ACVSFL
Trigger: CAGAAAAGACACACACGCGCACACACGGCGCGCACA...AGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR CCA 90 bp AGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCATGACGAGGGTCCCGTaGGTGATGAGGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: RPSDYACPSQRDRRPSLGMTRVP*VMRTPR
Trigger: TCTGGGTGTCCTCATCACCCACGGGACCCTCGTCAT...GCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCCAGTGGCTGGCACGCTaGCCACAGCCCCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVQWLAR*PQPPQA
Trigger: TGCCTGCGGGGGCTGTGGCCAGCGTGCCAGCCACTG...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp ACGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCCAGTGGCTGGCACGCTaGCCACAGCCCCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TEQFCHVKFCHALTNSPLQWLAR*PQPPQA
Trigger: TGCCTGCGGGGGCTGTGGCCAGCGTGCCAGCCACTG...GAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAACCGGACCTGGGCTTTaGGGTGGCTCTCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVITGPGL*GGSQAG
Trigger: ACCTGCCTGAGAGCCACCCCAAAGCCCAGGTCCGGT...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCATGCCCTCGTCCTCCTaGCTGGCATTCACAATCTGG +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPMPSSS*LAFTIW
Trigger: CCAGATTGTGAATGCCAGCCAGGAGGACGAGGGCAT...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCCTGACGTTGGGGGTCTaGGGAGCGCCGGTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVLTLGV*GAPVAP
Trigger: GGGGGCAACCGGCGCTCCCCAGACCCCCAACGTCAG...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCGGCTGGCTGCTGCTCTaGGGACTGGCTCCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIGWLLL*GLAPGS
Trigger: CGACCCTGGAGCCAGTCCCCAGAGCAGCAGCCAGCC...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGGGGGATGGCGCTGGTaGCCAGAATCCAGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWGGWRW*PESSLP
Trigger: TGGGAGACTGGATTCTGGCCACCAGCGCCATCCCCC...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCATACGGGCAGGAGGGTaGAAGGGCACTTCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPIRAGG*KGTSRK
Trigger: TTTCCTCGAAGTGCCCTTCCACCCTCCTGCCCGTAT...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTTGGGAGTCCTCCCAATaGCACCATAGTATACGGGCA +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLWESSQ*HHSIRA
Trigger: TGCCCGTATACTATGGTGCCATTGGGAGGACTCCCA...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGCTGCTGAAGCTCGCCTaGGCAGTGCTGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWLLKLA*AVLLGL
Trigger: AAGCCCCAGCAGCACTGCCCAGGCGAGCTTCAGCAG...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGGAGTCAGGACTGTCCACCTCTTCAACTGGCACAAGGCCCAAGCAGCATCTGCTGAAGCTCGCCTaGGCAGTGCTGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: WQESGLSTSSTGTRPKQHLLKLA*AVLLGL
Trigger: AAGCCCCAGCAGCACTGCCCAGGCGAGCTTCAGCAG...ATGCTGCTTGGGCCTTGTGCCAGTTGAAGAGGTGGACAGTCCTGACTCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR CCA 90 bp ACTCACTTGGCAGGAGTCAGGACTGTCCACCTCTTCAACTGGCACAAGGCCCAACTCCTCACCCCTGACTaGCCCACAGCAGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: THLAGVRTVHLFNWHKAQLLTPD*PTAAGC
Trigger: GCAGCCTGCTGCTGTGGGCCAGTCAGGGGTGAGGAG...TTGGGCCTTGTGCCAGTTGAAGAGGTGGACAGTCCTGACTCCTGCCAAGTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCCCTACGGGGTGCTaGGGACACCAGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCAPTGC*GHQSPP
Trigger: TGGAGGAGACTGGTGTCCCCAGCACCCCGTAGGGGC...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTGGGTGGAGGTGTGTGAGCAGTTaGGACAGTGCACCTACAGCC +
Preference number: 4 (lower is better)
Translates to: RTMLAPHRETGGQVWAGWRCVSS*DSAPTA
Trigger: GGCTGTAGGTGCACTGTCCCAACTGCTCACACACCT...CCACCCAGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp AGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCCAAGTCTGGGCTGGGTaGGCTCTGTCCAGACTACAC +
Preference number: 4 (lower is better)
Translates to: RPSDYACPSQRDRRPSLGQVWAG*ALSRLH
Trigger: GTGTAGTCTGGACAGAGCCCACCCAGCCCAGACTTG...GCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCGCGAGCGGCCGCGGCTaGAGCAACAAAGGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIASGRG*SNKGAE
Trigger: CTCGGCTCCTTTGTTGCTCCAGCCGCGGCCGCTCGC...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCACGGGGGCCAGCGTGGTaGGCGCGAGGGAGCCACACA +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPRGPAW*ARGSHT
Trigger: TGTGTGGCTCCCTCGCGCCCACCACGCTGGCCCCCG...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495514.5
3UTR CAA 72 bp TACGGGGTGCTGGGGACACCAGTCTCCTCCACTCACTaGGCAGGAGTCAGGACTGTCCACCTCTTCAACTGG +
Preference number: 4 (lower is better)
Translates to: YGVLGTPVSSTH*AGVRTVHLFNW
Trigger: CCAGTTGAAGAGGTGGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCACCCCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR TCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTCGCTCCCGGTCCGCTaGGTTCCTCATTTTAGTGTT +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPSLPVR*VPHFSV
Trigger: AACACTAAAATGAGGAACTCAGCGGACCGGGAGCGA...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273395.8
ENST00000355385.7
CDS-3UTR TCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAGGAGGCAAGCCAGTGTaGCCTCAGGCCTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIGGKPV*PQASFL
Trigger: GAGGAATGAGGCCTGAGGTCACACTGGCTTGCCTCC...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGGGTTCCCTGAGGGCATaGTCAGGTAGTTACCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLGSLRA*SGSYLW
Trigger: CCAGAGGTAACTACCTGATCATGCCCTCAGGGAACC...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTAATCTGGAGGTTCCCTaGGGGCATGATCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLNLEVP*GHDQVV
Trigger: AACTACCTGATCATGCCCTCAGGGAACCTCCAGATT...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACGCTGGTGGTGTCGATaGGGAGGTTGCTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIRWWCR*GGCSAG
Trigger: TCCTGCTGAGCAACCTCCTCATCGACACCACCAGCG...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCCGGGGTCAAGTCTGGTaGGGGTCAGGCGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIRGQVW*GSGGAG
Trigger: ACCAGCACCGCCTGACCCTCACCAGACTTGACCCCG...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCAGATCATCACGTTGCTaGACTCGCTCTCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPRSSRC*TRSPLL
Trigger: AAGGAGGGGAGAGCGAGTTCAGCAACGTGATGATCT...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCCATGGGGGCCCTGAGTaGAATGGAGGGTCCCACACT +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSHGGPE*NGGSHT
Trigger: AGTGTGGGACCCTCCATTTCACTCAGGGCCCCCATG...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACGGTGCTTTCCTGGGTaGCTCCTGTTAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIRCFPG*LLLGGS
Trigger: GCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCG...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGGTGTCTCCAGGCTGTaGTACCGTGCCCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWGVSRL*YRAPCC
Trigger: ACAGCAAGGGGCACGGTATCACAGCCTGGAGACACC...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CTACGGGGTGCTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACCAGCTCGTGATCTGGTaGCTTTGGGGGTCATATCCA +
Preference number: 4 (lower is better)
Translates to: LRGAGDTSLLHSLGRSQDQLVIW*LWGSYP
Trigger: TGGATATGACCCCCAAAGTCACCAGATCACGAGCTG...GTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCACCCCGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR GCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCGTAGAGGATGACCGCTaGCCCGGGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVVEDDR*PGLPNP
Trigger: GGGGTTGGGCAGCCCGGGGCAGCGGTCATCCTCTAC...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCGCATCTGCTCAGGGTTaGCGAGTTTGGAGGGTGATA +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPASAQG*RVWRVI
Trigger: TATCACCCTCCAAACTCGGCAACCCTGAGCAGATGC...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTTGGCGCCCGGCCACTaGCCTCATGCCGAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVLAPGH*PHAEAA
Trigger: GGCGGCCTCGGCATGAGGGCAGTGGCCGGGCGCCAA...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGTAGACACTCACTCCAGATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCGGCACGGCACGGCCCTaGTCTGGGGCCCACGGAACA +
Preference number: 4 (lower is better)
Translates to: CRHSLQIQPLLGVRFSKGGTARP*SGAHGT
Trigger: TGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTGCC...GCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATCTGGAGTGAGTGTCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR GCA 90 bp AGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCCAGGCCTTCGGACTATaGTTGCCCCTCACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RPSDYACPSQRDRRPSLGQAFGL*LPLTER
Trigger: TCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTG...GCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTCAGTGGCTGGCACGCTaGCCACAGCCCCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPQWLAR*PQPPQA
Trigger: TGCCTGCGGGGGCTGTGGCCAGCGTGCCAGCCACTG...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGACGCTGTACCGGACCTaGGCTTTGGGGTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWTLYRT*ALGWLS
Trigger: TGAGAGCCACCCCAAAGCCCAGGTCCGGTACAGCGT...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGATGCCCTCGTCCTCCTaGCTGGCATTCACAATCTGG +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLMPSSS*LAFTIW
Trigger: CCAGATTGTGAATGCCAGCCAGGAGGACGAGGGCAT...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCCACTTCCTGGGTCACTaGGTTGTAGGCTGCACACTT +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPHFLGH*VVGCTL
Trigger: AAGTGTGCAGCCTACAACCCAGTGACCCAGGAAGTG...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGTAAGCTTGGCACTCTaGCCCCAGGGGATGACCAGC +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWVSLAL*PQGMTS
Trigger: GCTGGTCATCCCCTGGGGCCAGAGTGCCAAGCTTAC...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGCCTTGGGGTTATGCTTaGCCTGGAGGTCCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWPWGYA*PGGPQL
Trigger: CAGCTGCGGACCTCCAGGCCAAGCATAACCCCAAGG...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCCCTTGGGGTTATGCTTaGCCTGGAGGTCCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSPWGYA*PGGPQL
Trigger: CAGCTGCGGACCTCCAGGCCAAGCATAACCCCAAGG...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCCTGACGTTGGGGGTCTaGGGAGCGCCGGTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAILTLGV*GAPVAP
Trigger: GGGGGCAACCGGCGCTCCCCAGACCCCCAACGTCAG...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGCACATAGTAGAGGATTaGCGCCCGGCCACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWHIVED*RPATAL
Trigger: GAGGGCAGTGGCCGGGCGCCAATCCTCTACTATGTG...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGCCAGGGTCGTCTCTCTaGATCTGCTGCTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLPGSSL*ICCSLL
Trigger: CAGCAAAGAGCAGCAGATCCAGAGAGACGACCCTGG...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATATGCTGCTCTGGGGACTaGCTCCAGGGTCGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVICCSGD*LQGRLS
Trigger: AGAGAGACGACCCTGGAGCCAGTCCCCAGAGCAGCA...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAGAGGCGGCCGTGGTCTaGCTGGCTGCTGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPEAAVV*LAAALG
Trigger: CCCCAGAGCAGCAGCCAGCCAGACCACGGCCGCCTC...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCCACGGACAGCCGCGATaGGGGGATGGCGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIHGQPR*GDGAGG
Trigger: GCCACCAGCGCCATCCCCCCATCGCGGCTGTCCGTG...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTGGTGGGGCCAGAGTTaGGGGTGGCAGTCGACCAGG +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIWWGQS*GWQSTR
Trigger: CCTGGTCGACTGCCACCCCCAACTCTGGCCCCACCA...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCAGGAAGGGGCGGCTGTaGTGGGGCCAGAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVRKGRL*WGQSWG
Trigger: CCCCCAACTCTGGCCCCACCACAGCCGCCCCTTCCT...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTGGAGCGAGCCACCATaGCCCCAGTGCCCACCGGCC +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPWSEPP*PQCPPA
Trigger: GGCCGGTGGGCACTGGGGCCATGGTGGCTCGCTCCA...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CGGGGTGCTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTTATCCATTGCCAAGATaGGTCTGCCTCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGAGDTSLLHSLGRSQDCYPLPR*VCLSRL
Trigger: CAGCCTGCTGAGGCAGACCCATCTTGGCAATGGATA...ACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGCAGCAGCTGGTGAGTaGAGTCGTCGGGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWAAAGE*SRRAVC
Trigger: ACACACTGCCCGACGACTCCACTCACCAGCTGCTGC...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTTGCCAGCTTATCTGTaGGCCTCCTGCAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSLPAYL*ASCSLA
Trigger: GGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAA...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGTCGCTCCCGGTCCGCTaGGTTCCTCATTTTAGTGTT +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLSLPVR*VPHFSV
Trigger: AACACTAAAATGAGGAACTCAGCGGACCGGGAGCGA...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273395.8
ENST00000355385.7
CDS-3UTR TCA 90 bp GCACGGCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAAGTTCTGTATCACAAAGGTCTaGAGCCAACGTCCCATAAGC +
Preference number: 4 (lower is better)
Translates to: ARHGPALGPTEQFCHVKFCITKV*SQRPIS
Trigger: GCTTATGGGACGTTGGCTTCAGACCTTTGTGATACA...GAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR TCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTGCTGCACATCTAACTTaGAGTCCTGGAGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLAAHLT*SPGDWL
Trigger: TAGCCAATCTCCAGGACTTCAAGTTAGATGTGCAGC...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTCCAGCCACTCTTGTTTaGCGCTGTACCGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCPATLV*RCTGPG
Trigger: CCCAGGTCCGGTACAGCGTCAAACAAGAGTGGCTGG...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCAATCTGGAGGTTCCCTaGGGGCATGATCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPNLEVP*GHDQVV
Trigger: AACTACCTGATCATGCCCTCAGGGAACCTCCAGATT...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCCATCCTTGGCCCAGGTaGCCCGTGGGGGTGGGATTC +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVHPWPR*PVGVGF
Trigger: GAATCCCACCCCCACGGGTCACCTGGGCCAAGGATG...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCGCTCTTTGCTGGCCATaGTCTCGGGTTTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIALCWP*SRVWAA
Trigger: GGCGGCCCAAACCCGAGATCATGGCCAGCAAAGAGC...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCCCAGGTCACGTACACTaGGGTCTCGGAGGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIPGHVH*GLGGRG
Trigger: TCCACGGCCTCCGAGACCTCAGTGTACGTGACCTGG...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCCTTTCTCTAGGCCCGTaGTCTCCACGGACAGCCGCG +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLILSLGP*SPRTAA
Trigger: CGCGGCTGTCCGTGGAGATCACGGGCCTAGAGAAAG...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAACTTGGGACCCCTCGTaGTCTGGTGACTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVITWDPS*SGDFGG
Trigger: ACCCCCAAAGTCACCAGATCACGAGGGGTCCCAAGT...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCCGTTGGCAGCAGTCGTaGTGGGGCTGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVRWQQS*WGCSSW
Trigger: CCAGCTGCTGCAGCCCCATCACGACTGCTGCCAACG...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTCGGTGCTTTCCTGGGTaGCTCCTGTTAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCRCFPG*LLLGGS
Trigger: GCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCG...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGGTGTCTCCAGGCTGTaGTACCGTGCCCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCGVSRL*YRAPCC
Trigger: ACAGCAAGGGGCACGGTATCACAGCCTGGAGACACC...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCACACAACACGCTCGGTaGCACCGGGGACACACAACA +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSTQHAR*HRGHTT
Trigger: TGTTGTGTGTCCCCGGTGTCACCGAGCGTGTTGTGT...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495514.5
CDS-3UTR TCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCAGGAAGCTTGTTCTaGAACTCTGCTGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIPGSLF*NSAAAG
Trigger: GCCGGCTGCAGCAGAGTTTCAGAACAAGCTTCCTGG...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495514.5
CDS-3UTR TCA 90 bp GGAAGGCACGGCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCATTCCACATGTTGGTCTaGGGACCTATGTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: GRHGTALLWGPRNSSAMSFHMLV*GPMFFV
Trigger: GACAAAGAACATAGGTCCTCAGACCAACATGTGGAA...TGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR GCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTAGCCCAAGATCACAGTaGCTCCGGGCTTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCSPRSQ*LRASGR
Trigger: CCGTCCAGAAGCCCGGAGGCACTGTGATCTTGGGCT...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCTCGTTCTCGGCCATaGACTGGTAGACGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIPRSRP*TGRRLR
Trigger: ACGAAGGCGTCTACCAGTGCATGGCCGAGAACGAGG...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTGCCCCCTCAGCATCTaGTCAGGGTTGCCGAGTTTG +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSCPLSI*SGLPSL
Trigger: CAAACTCGGCAACCCTGAGCAGATGCTGAGGGGGCA...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTCGGCGGGAGCCCCCTaGCCCTTCTCTCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPSAGAP*PFSPGH
Trigger: GTGTCCAGGAGAGAAGGGGCAGGGGGCTCCCGCCGA...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCACGGCCACTGCCCTCATaGCGAGGCCGCCACACCAGT +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPRPLPS*RGRHTS
Trigger: ACTGGTGTGGCGGCCTCGGCATGAGGGCAGTGGCCG...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp AAAGACACACGCACCAGTGGCCCCGGGGAGAGCTGCATTCCAGGTTCCTGTCCTGGGGGTCATATCCATTaGCAAGATGGGTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: KDTRTSGPGESCIPGSCPGGHIH*QDGSAS
Trigger: TGAGGCAGACCCATCTTGGCAATGGATATGACCCCC...AGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCCACTGGTGCGTGTGTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR GCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCCCCACAGCAGCAGGCTaGTCCTGGCGTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVPTAAG*SWRWQQ
Trigger: CTGCTGCCAACGCCAGGAGCAGCCTGCTGCTGTGGG...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCAGCCTCGCCTGCCACTaGAGAGGCCCCAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLISLACH*RGPRLG
Trigger: TCCTAACCTGGGGCCTCTGCAGTGGCAGGCGAGGCT...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTATCTGTGGGCCTCCTaGAGCCTCGCCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIYLWAS*SLACHC
Trigger: GCAGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATA...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GCACGGCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAAGTTCTGTCAAGTTCTGCCATaGACTGACCAATTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ARHGPALGPTEQFCHVKFCQVLP*TDQFPS
Trigger: AGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACA...GAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR GCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGCTTGTTCTGAAACTCTaGTGCAGCCGGCGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWLVLKL*CSRRLG
Trigger: TCCCAGGCGCCGGCTGCAGCAGAGTTTCAGAACAAG...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495514.5
CDS-3UTR CCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCCAAAGCAGCCTGCTGTaGCTAGGAGGAGGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSQSSLL*LGGGKP
Trigger: TGGCTTGCCTCCTCCTAGCCACAGCAGGCTGCTTTG...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTATCCGGGCCACACACTaGTACCGTCCCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCIRATH*YRPTVW
Trigger: CCACACTGTGGGACGGTACCAGTGTGTGGCCCGGAT...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCCTGGAGGTCCGCAGCTaGACTACGGCATGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVLEVRS*TTAWAL
Trigger: GAGCGCCCATGCCGTAGTCCAGCTGCGGACCTCCAG...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCCTGCCCCTTCTCTCCTaGACACTGCGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLILPLLS*TLRGSR
Trigger: CCTGCTTCCCCGCAGTGTCCAGGAGAGAAGGGGCAG...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCGCGGTGCTGGTTGGCTaGAATGCCAGAGATGGTCCA +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSAVLVG*NARDGP
Trigger: TGGACCATCTCTGGCATTCCAGCCAACCAGCACCGC...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCAGGCGGTGCTGGTTaGCTGGAATGCCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSSGGAG*LECQRW
Trigger: CCATCTCTGGCATTCCAGCCAACCAGCACCGCCTGA...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTAGGGTCAGGCGGTGCTaGTTGGCTGGAATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCRVRRC*LAGMPE
Trigger: CTCTGGCATTCCAGCCAACCAGCACCGCCTGACCCT...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTTGCTGCTCTGGGGACTaGCTCCAGGGTCGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCCCSGD*LQGRLS
Trigger: AGAGAGACGACCCTGGAGCCAGTCCCCAGAGCAGCA...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCACGGCCGTGGTCTGGCTaGCTGCTGCTCTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPRPWSG*LLLWGL
Trigger: CAGTCCCCAGAGCAGCAGCCAGCCAGACCACGGCCG...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGTCCACACGGAAGGACTaGATTGGGAACCCACCATTC +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLSTRKD*IGNPPF
Trigger: GAATGGTGGGTTCCCAATCCAGTCCTTCCGTGTGGA...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCGGCCAGAGTTGGGGGTaGCAGTCGACCAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIGQSWG*QSTRLA
Trigger: GGCCAGCCTGGTCGACTGCCACCCCCAACTCTGGCC...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTTGTCCACTGGCCTGGTaGCCTGGGAGTCCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCCPLAW*PGSPPN
Trigger: ATTGGGAGGACTCCCAGGCCACCAGGCCAGTGGACA...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCGGTAGGGCTGTCCACTaGCCTGGTGGCCTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVGRAVH*PGGLGV
Trigger: GACTCCCAGGCCACCAGGCCAGTGGACAGCCCTACC...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGCCTCAGCAGGCTGCTaGTGTCACTCTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWASAGC*CHSAAE
Trigger: TTCAGCAGCAGAGTGACACCAGCAGCCTGCTGAGGC...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTCCACCTCTATCCATTGCCAAGATaGGTCTGCCTCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGTPVSSTHLAGVRTVHLYPLPR*VCLSRL
Trigger: CAGCCTGCTGAGGCAGACCCATCTTGGCAATGGATA...GAGGTGGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCAGCAGCTGGTGAGTaGAGTCGTCGGGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCAAAGE*SRRAVC
Trigger: ACACACTGCCCGACGACTCCACTCACCAGCTGCTGC...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGCCTAAATTGTGAGAGGTGGTGTTTCAAAAGACACACGCACCAGTGGCCCCGGAGACACACGCACCAGTaGCCCCGGGGAGAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CLNCERWCFKRHTHQWPRRHTHQ*PRGELH
Trigger: ATGCAGCTCTCCCCGGGGCCACTGGTGCGTGTGTCT...CCGGGGCCACTGGTGCGTGTGTCTTTTGAAACACCACCTCTCACAATTTAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTTTGCCAGCTTATCTGTaGGCCTCCTGCAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCLPAYL*ASCSLA
Trigger: GGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAA...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGATCCAGCCATCTGTGTaGGTGTCTCCAGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLIQPSV*VSPGCD
Trigger: ATCACAGCCTGGAGACACCCACACAGATGGCTGGAT...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp ACGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCGGCACGGCCCTGCTCTaGGGCCCACGGAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: TEQFCHVKFCHALTNSPLGTALL*GPRNSS
Trigger: AGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCC...GAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
3UTR CAA 72 bp CTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTaGCTGTTCCCTCATGCTCGTGATGAACCATGTGCC +
Preference number: 4 (lower is better)
Translates to: LCGCLQAVIPCP*LFPHARDEPCA
Trigger: GGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGGTTCCCTGAGGGCATaGTCAGGTAGTTACCTCTGG +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWGSLRA*SGSYLW
Trigger: CCAGAGGTAACTACCTGATCATGCCCTCAGGGAACC...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCCATCCTTGGCCCAGGTaGCCCGTGGGGGTGGGATTC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIHPWPR*PVGVGF
Trigger: GAATCCCACCCCCACGGGTCACCTGGGCCAAGGATG...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCCGCTGGTGGTGTCGATaGGGAGGTTGCTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIRWWCR*GGCSAG
Trigger: TCCTGCTGAGCAACCTCCTCATCGACACCACCAGCG...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAGCAGCGGTAGGTGCCTaGGTCCTCCTCGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPAAVGA*VLLAGG
Trigger: ACCACCAGCGAGGAGGACTCAGGCACCTACCGCTGC...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGGGATAGCTCCATGGTaGCCTCAGGGGGTTCAAACA +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWGIAPW*PQGVQT
Trigger: TGTTTGAACCCCCTGAGGTCACCATGGAGCTATCCC...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTCTGGCTGCAGGTGGCTaGTGGAGTGCCAGTACTTGT +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCLAAGG*WSASTC
Trigger: ACAAGTACTGGCACTCCATCAGCCACCTGCAGCCAG...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCCCTCGTGATCTGGTaGCTTTGGGGGTCATATCCA +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIPLVIW*LWGSYP
Trigger: TGGATATGACCCCCAAAGTCACCAGATCACGAGGGG...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAGGCTGCAGCAGCTGGTaGGTGGAGTCGTCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPGCSSW*VESSGS
Trigger: ACTGCCCGACGACTCCACTCACCAGCTGCTGCAGCC...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCACGTTGGCAGCAGTCGTaGTGGGGCTGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPRWQQS*WGCSSW
Trigger: CCAGCTGCTGCAGCCCCATCACGACTGCTGCCAACG...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GCCCACGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCCCTACAGCCACAGGATaGCCAAGTAGGAAGGCACGG +
Preference number: 4 (lower is better)
Translates to: AHGTVLPCQVLPCTDQFPPTATG*PSRKAR
Trigger: CCGTGCCTTCCTACTTGGTCATCCTGTGGCTGTAGG...GGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGTGGGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR TCA 90 bp GCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAAGTTCTGCCAAGGACCATCCGTCAGTaGGCACATGGAAATGGAATT +
Preference number: 4 (lower is better)
Translates to: ARPCSGAHGTVLPCQVLPRTIRQ*AHGNGI
Trigger: AATTCCATTTCCATGTGCTCACTGACGGATGGTCCT...TGGCAGAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR GCA 90 bp TATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAAGCCCAAGATCACAGTaGCTCCGGGCTTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: YNPGLRTMLAPHRETGGQSPRSQ*LRASGR
Trigger: CCGTCCAGAAGCCCGGAGGCACTGTGATCTTGGGCT...TTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR GCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCCGTGGTCTGGCTGGCTaGTGCTCTGGGGACTGGCTC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIRGLAG*CSGDWL
Trigger: GAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACCACG...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTCGTGGTCTGGCTGGCTaGTGCTCTGGGGACTGGCTC +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPRGLAG*CSGDWL
Trigger: GAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACCACG...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAGGTGATATAAGGACCTaGCACGGGCCTCTCGTACAC +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIGDIRT*HGPLVH
Trigger: GTGTACGAGAGGCCCGTGGCAGGTCCTTATATCACC...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTGCTGCTGGGGCTTCATaGCCGGGTAGCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPAAGAS*PGSPLQ
Trigger: CTGCAGTGGGCTACCCGGGCATGAAGCCCCAGCAGC...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCGCTGCTGGGGCTTCATaGCCGGGTAGCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIAAGAS*PGSPLQ
Trigger: CTGCAGTGGGCTACCCGGGCATGAAGCCCCAGCAGC...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCAGCTCGCCTGGGCAGTaGTGCTGGGGCTTCATGCCC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAISSPGQ*CWGFMP
Trigger: GGGCATGAAGCCCCAGCAGCACTGCCCAGGCGAGCT...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCGGCCCCGGGGAGAGCTaGATTCCAGGTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVGPGES*IPGSCP
Trigger: AGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCC...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTGGGTGGAGACTTCATGGGTCATaGGTTCCAGGAAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RTMLAPHRETGGQVWAGWRLHGS*VPGSLF
Trigger: GAACAAGCTTCCTGGAACCCATGACCCATGAAGTCT...CCACCCAGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTCAAAGCAGCCTGCTGTaGCTAGGAGGAGGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCQSSLL*LGGGKP
Trigger: TGGCTTGCCTCCTCCTAGCCACAGCAGGCTGCTTTG...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTTGGCTCTCAGGCAGGTaGCAGGCAATGACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCWLSGR*QAMTAV
Trigger: CACAGCAGTCATTGCCTGCCACCTGCCTGAGAGCCA...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCACCGGACCTGGGCTTTaGGGTGGCTCTCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVTGPGL*GGSQAG
Trigger: ACCTGCCTGAGAGCCACCCCAAAGCCCAGGTCCGGT...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCACGCTGTACCGGACCTaGGCTTTGGGGTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLITLYRT*ALGWLS
Trigger: TGAGAGCCACCCCAAAGCCCAGGTCCGGTACAGCGT...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGATGCCCTCGTCCTCCTaGCTGGCATTCACAATCTGG +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWMPSSS*LAFTIW
Trigger: CCAGATTGTGAATGCCAGCCAGGAGGACGAGGGCAT...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCCACGTAGCCTGTCGCTaGAGCCGGAGGTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSHVACR*SRRFSL
Trigger: AAGTGAAAACCTCCGGCTCCAGCGACAGGCTACGTG...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCGTAAGCTTGGCACTCTaGCCCCAGGGGATGACCAGC +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIVSLAL*PQGMTS
Trigger: GCTGGTCATCCCCTGGGGCCAGAGTGCCAAGCTTAC...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCGAGAGCCGGAGGCGCTaGCTGGAGATGAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIESRRR*LEMRGT
Trigger: TGTGCCCCTCATCTCCAGCCAGCGCCTCCGGCTCTC...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCACTGGAGGTCCGCAGCTaGACTACGGCATGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPLEVRS*TTAWAL
Trigger: GAGCGCCCATGCCGTAGTCCAGCTGCGGACCTCCAG...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGGGTTATGCTTGGCCTaGAGGTCCGCAGCTGGACTA +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCGLCLA*RSAAGL
Trigger: TAGTCCAGCTGCGGACCTCCAGGCCAAGCATAACCC...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCTGACGTTGGGGGTCTaGGGAGCGCCGGTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLLTLGV*GAPVAP
Trigger: GGGGGCAACCGGCGCTCCCCAGACCCCCAACGTCAG...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCCACATAGTAGAGGATTaGCGCCCGGCCACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIHIVED*RPATAL
Trigger: GAGGGCAGTGGCCGGGCGCCAATCCTCTACTATGTG...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCCTGGAATGCCAGAGATaGTCCAATCGTCAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPLECQR*SNRQRN
Trigger: ATTCCTCTGACGATTGGACCATCTCTGGCATTCCAG...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCGGTGCTGGTTGGCTaGAATGCCAGAGATGGTCCA +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCAVLVG*NARDGP
Trigger: TGGACCATCTCTGGCATTCCAGCCAACCAGCACCGC...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCAGGGTCAGGCGGTGCTaGTTGGCTGGAATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIRVRRC*LAGMPE
Trigger: CTCTGGCATTCCAGCCAACCAGCACCGCCTGACCCT...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGCCAGGGTCGTCTCTCTaGATCTGCTGCTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWPGSSL*ICCSLL
Trigger: CAGCAAAGAGCAGCAGATCCAGAGAGACGACCCTGG...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTAGGTCTCGGAGGCCGTaGAGATGGTGGGCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPRSRRP*RWWACR
Trigger: CCGACAGGCCCACCATCTCCACGGCCTCCGAGACCT...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCATGGTGGGGCCAGAGTTaGGGGTGGCAGTCGACCAGG +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPWWGQS*GWQSTR
Trigger: CCTGGTCGACTGCCACCCCCAACTCTGGCCCCACCA...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCAGGAAGGGGCGGCTGTaGTGGGGCCAGAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVRKGRL*WGQSWG
Trigger: CCCCCAACTCTGGCCCCACCACAGCCGCCCCTTCCT...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTGATAGGGCAGGTCGCTaGAGCGAGCCACCATGGCCC +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPDRAGR*SEPPWP
Trigger: GGGCCATGGTGGCTCGCTCCAGCGACCTGCCCTATC...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTGTCCACTGGCCTGGTaGCCTGGGAGTCCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLICPLAW*PGSPPN
Trigger: ATTGGGAGGACTCCCAGGCCACCAGGCCAGTGGACA...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTCCACCTCTCAGCCCCTATTCATGTaGATCCCATTAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: WGHQSPPLTWQESGLSTSQPLFM*IPLAQA
Trigger: GGCCTGTGCTAATGGGATCCACATGAATAGGGGCTG...AGAGGTGGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCCTGCTGAAGCTCGCCTaGGCAGTGCTGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVLLKLA*AVLLGL
Trigger: AAGCCCCAGCAGCACTGCCCAGGCGAGCTTCAGCAG...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCACTCCTCACCCCTGACTaGCCCACAGCAGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPLLTPD*PTAAGC
Trigger: GCAGCCTGCTGCTGTGGGCCAGTCAGGGGTGAGGAG...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTCCACCTCTTCAACTGGCACTCTCCTCCACTCACTTaGCAGGAGTCAGGACTGTCC +
Preference number: 4 (lower is better)
Translates to: VSSTHLAGVRTVHLFNWHSPPLT*QESGLS
Trigger: GGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGA...GTGCCAGTTGAAGAGGTGGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCGCCCCTACGGGGTGCTaGGGACACCAGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIAPTGC*GHQSPP
Trigger: TGGAGGAGACTGGTGTCCCCAGCACCCCGTAGGGGC...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATATGTGCGGTGCTTTCCTaGGTGACTCCTGTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVICAVLS*VTPVRW
Trigger: CCACCTAACAGGAGTCACCCAGGAAAGCACCGCACA...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGCCACAGGATGACCAAGTAGGAAGGCACGGCACGGCCCTGCTCTGGGGCCCATTGGTTTCCACATGTTaGTCTGAGGACCTATGTTCT +
Preference number: 4 (lower is better)
Translates to: QPQDDQVGRHGTALLWGPLVSTC*SEDLCS
Trigger: AGAACATAGGTCCTCAGACCAACATGTGGAAACCAA...TGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCCTACTTGGTCATCCTGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR TCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGGTTCCCTGAGGGCATaGTCAGGTAGTTACCTCTGG +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCGSLRA*SGSYLW
Trigger: CCAGAGGTAACTACCTGATCATGCCCTCAGGGAACC...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCCATCCTTGGCCCAGGTaGCCCGTGGGGGTGGGATTC +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVHPWPR*PVGVGF
Trigger: GAATCCCACCCCCACGGGTCACCTGGGCCAAGGATG...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGGGATAGCTCCATGGTaGCCTCAGGGGGTTCAAACA +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCGIAPW*PQGVQT
Trigger: TGTTTGAACCCCCTGAGGTCACCATGGAGCTATCCC...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTCTGGCCCCAGGGGATaGCCAGCTGGGATAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPSGPRG*PAGIAP
Trigger: TGGAGCTATCCCAGCTGGTCATCCCCTGGGGCCAGA...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCATCTGGCCCCAGGGGATaGCCAGCTGGGATAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPSGPRG*PAGIAP
Trigger: TGGAGCTATCCCAGCTGGTCATCCCCTGGGGCCAGA...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAAGATCATCACGTTGCTaGACTCGCTCTCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIRSSRC*TRSPLL
Trigger: AAGGAGGGGAGAGCGAGTTCAGCAACGTGATGATCT...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTGTGTCACTCTGCTGCTaGAGCTCGCCTGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPVSLCC*SSPGQC
Trigger: GCACTGCCCAGGCGAGCTTCAGCAGCAGAGTGACAC...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAGTGTCACTCTGCTGCTaGAGCTCGCCTGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPVSLCC*SSPGQC
Trigger: GCACTGCCCAGGCGAGCTTCAGCAGCAGAGTGACAC...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCGGCTGCAGCAGCTGGTaGGTGGAGTCGTCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVGCSSW*VESSGS
Trigger: ACTGCCCGACGACTCCACTCACCAGCTGCTGCAGCC...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTCTGCCTAAATTGTaGGAGGTGGTGTTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLLLPKL*EVVFQK
Trigger: CTTTTGAAACACCACCTCTCACAATTTAGGCAGAAG...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCGGTGTCTCCAGGCTGTaGTACCGTGCCCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVGVSRL*YRAPCC
Trigger: ACAGCAAGGGGCACGGTATCACAGCCTGGAGACACC...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTATGCTTCCCTCAAGCTaGGTCGCTCCCGGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPMLPSS*VAPGPL
Trigger: CAGCGGACCGGGAGCGACGCAGCTTGAGGGAAGCAT...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273395.8
ENST00000355385.7
CDS-3UTR GCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGCACTGGGTTGTAGGCTaGACACTTGTACATGCCCTC +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWHWVVG*TLVHAL
Trigger: GAGGGCATGTACAAGTGTGCAGCCTACAACCCAGTG...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGCATCTGCTCAGGGTTaGCGAGTTTGGAGGGTGATA +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWASAQG*RVWRVI
Trigger: TATCACCCTCCAAACTCGGCAACCCTGAGCAGATGC...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCTCGGCGGGAGCCCCCTaGCCCTTCTCTCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLSAGAP*PFSPGH
Trigger: GTGTCCAGGAGAGAAGGGGCAGGGGGCTCCCGCCGA...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCGTCTCTCTGGATCTaGTGCTCTTTGCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSSSLWI*CSLLAM
Trigger: CATGGCCAGCAAAGAGCAGCAGATCCAGAGAGACGA...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCGGTCTGGCTGGCTGCTaGTCTGGGGACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVGLAGC*SGDWLQ
Trigger: CTGGAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACC...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCCACCATGGCCCCAGTaGCCACCGGCCGCTCTATGG +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLPPWPQ*PPAALW
Trigger: CCATAGAGCGGCCGGTGGGCACTGGGGCCATGGTGG...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCGCTGCTGGGGCTTCATaGCCGGGTAGCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVAAGAS*PGSPLQ
Trigger: CTGCAGTGGGCTACCCGGGCATGAAGCCCCAGCAGC...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTCTGCCTCAGCAGGCTaGTGGTGTCACTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLISASAG*WCHSAA
Trigger: AGCAGCAGAGTGACACCAGCAGCCTGCTGAGGCAGA...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGGGGGTCATATCCATTaGCAAGATGGGTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWGGHIH*QDGSAS
Trigger: TGAGGCAGACCCATCTTGGCAATGGATATGACCCCC...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCAGCCTCGCCTGCCACTaGAGAGGCCCCAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAISLACH*RGPRLG
Trigger: TCCTAACCTGGGGCCTCTGCAGTGGCAGGCGAGGCT...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTATCTGTGGGCCTCCTaGAGCCTCGCCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIYLWAS*SLACHC
Trigger: GCAGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATA...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATATGGGATCCTTCCTCTTaGCAGCTTATCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIWDPSS*QLICGP
Trigger: AGGCCCACAGATAAGCTGGCAAGAGGAAGGATCCCA...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTTGTCAAGTTCTGCCATaGACTGACCAATTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GLRTMLAPHRETGGQVWACQVLP*TDQFPS
Trigger: AGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACA...AGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR GCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGTTCTTTTGCTTCTCCTaGCTAGGAGCCTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLFFCFS*LGASHY
Trigger: GTAATGGGAGGCTCCTAGGCAGGAGAAGCAAAAGAA...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495514.5
CDS-3UTR CCA 90 bp ATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCACAAGGGTCCCCCATCACCAAAGCAGCCTGCTGTaGCTAGGAGGAGGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: IQPLLGVRFSKGTRVPHHQSSLL*LGGGKP
Trigger: TGGCTTGCCTCCTCCTAGCCACAGCAGGCTGCTTTG...GTGATGGGGGACCCTTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCGTGCCTCCGGGCTTCTaGACGGTGGACGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLVPPGF*TVDAGW
Trigger: CCAGCCTGCGTCCACCGTCCAGAAGCCCGGAGGCAC...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TCACTCCAGATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCACAAGGGTCTGGCTAGTGTCACAGTaGCTGGCACGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SLQIQPLLGVRFSKGTRVWLVSQ*LARWPQ
Trigger: CTGTGGCCAGCGTGCCAGCCACTGTGACACTAGCCA...GACCCTTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATCTGGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACACTTCCTGGGTCACTaGGTTGTAGGCTGCACACTT +
Preference number: 4 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIHFLGH*VVGCTL
Trigger: AAGTGTGCAGCCTACAACCCAGTGACCCAGGAAGTG...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTCACGTAGCCTGTCGCTaGAGCCGGAGGTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCHVACR*SRRFSL
Trigger: AAGTGAAAACCTCCGGCTCCAGCGACAGGCTACGTG...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTCTGCCCCTTCTCTCCTaGACACTGCGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPLPLLS*TLRGSR
Trigger: CCTGCTTCCCCGCAGTGTCCAGGAGAGAAGGGGCAG...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTGCTGCTCTGGGGACTaGCTCCAGGGTCGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVCCSGD*LQGRLS
Trigger: AGAGAGACGACCCTGGAGCCAGTCCCCAGAGCAGCA...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCGGCTGGCTGCTGCTCTaGGGACTGGCTCCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLGWLLL*GLAPGS
Trigger: CGACCCTGGAGCCAGTCCCCAGAGCAGCAGCCAGCC...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCCGGAGGCCGTGGAGATaGTGGGCCTGTCGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVRRPWR*WACREL
Trigger: AAGCTCCCGACAGGCCCACCATCTCCACGGCCTCCG...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCGGGGGATGGCGCTGGTaGCCAGAATCCAGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIGGWRW*PESSLP
Trigger: TGGGAGACTGGATTCTGGCCACCAGCGCCATCCCCC...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCCCACCGGCCGCTCTATaGTTTCAGGAAGGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIPPAAL*FQEGAA
Trigger: AGCCGCCCCTTCCTGAAACCATAGAGCGGCCGGTGG...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTATACGGGCAGGAGGGTaGAAGGGCACTTCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCIRAGG*KGTSRK
Trigger: TTTCCTCGAAGTGCCCTTCCACCCTCCTGCCCGTAT...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGCAGCCCCTATTCATGTaGATCCCATTAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWQPLFM*IPLAQA
Trigger: GGCCTGTGCTAATGGGATCCACATGAATAGGGGCTG...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCGCCCCTACGGGGTGCTaGGGACACCAGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVAPTGC*GHQSPP
Trigger: TGGAGGAGACTGGTGTCCCCAGCACCCCGTAGGGGC...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCAGACACACGCACCAGTaGCCCCGGGGAGAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIRHTHQ*PRGELH
Trigger: ATGCAGCTCTCCCCGGGGCCACTGGTGCGTGTGTCT...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATGAACCATGTGCCTaGGATCCTTCCTCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWDEPCA*DPSSCQ
Trigger: CTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATC...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp ACGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCAGGCCAAGTCTGGGCTaGGTGGGCTCTGTCCAGACT +
Preference number: 4 (lower is better)
Translates to: TEQFCHVKFCHALTNSPLRPSLG*VGSVQT
Trigger: AGTCTGGACAGAGCCCACCCAGCCCAGACTTGGCCT...GAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp GCACGGCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAAGTTCTCTTGGCATTTTCCTTaGTCCAAACTGTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: ARHGPALGPTEQFCHVKFSWHFP*SKLSPH
Trigger: ATGAGGTGACAGTTTGGACCAAGGAAAATGCCAAGA...GAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp GGAAGGCACGGCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCATGTGAAGTCTTCTCTTaGCATTTTCCTTGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: GRHGTALLWGPRNSSAMSCEVFS*HFPWSK
Trigger: TTTGGACCAAGGAAAATGCCAAGAGAAGACTTCACA...TGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR TCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCACCAGCCACTCTTGTTTaGCGCTGTACCGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPPATLV*RCTGPG
Trigger: CCCAGGTCCGGTACAGCGTCAAACAAGAGTGGCTGG...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCCCAGCCACTCTTGTTTaGCGCTGTACCGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIPATLV*RCTGPG
Trigger: CCCAGGTCCGGTACAGCGTCAAACAAGAGTGGCTGG...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTCTTGTTGTAGCCGGTaGCACTGGACCCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLISCCSR*HWTHPW
Trigger: CCAAGGATGGGTCCAGTGTCACCGGCTACAACAAGA...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCGGGGTCAAGTCTGGTaGGGGTCAGGCGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLRGQVW*GSGGAG
Trigger: ACCAGCACCGCCTGACCCTCACCAGACTTGACCCCG...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAGTCCAGTTCGGAAGGTaGCCATGGCTGTCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPVQFGR*PWLSGP
Trigger: AGGGCCAGACAGCCATGGTCACCTTCCGAACTGGAC...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCGCTCTTTGCTGGCCATaGTCTCGGGTTTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVALCWP*SRVWAA
Trigger: GGCGGCCCAAACCCGAGATCATGGCCAGCAAAGAGC...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCGCAGCATGGGGGCCCTaGGTGAAATGGAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVAAWGP*VKWRVP
Trigger: TGGGACCCTCCATTTCACTCAGGGCCCCCATGCTGC...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CACACGCACCAGTGGCCCCGGGGAGAGCTGCATTCCAGGTTCCTGTCCTACGTACTTCTGCCTAAATTGTaGGAGGTGGTGTTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: HTHQWPRGELHSRFLSYVLLPKL*EVVFQK
Trigger: CTTTTGAAACACCACCTCTCACAATTTAGGCAGAAG...TACGTAGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCCACTGGTGCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR TCA 90 bp TCACTCCAGATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCACAAGGGTCCCTACAGCCACAGGATaGCCAAGTAGGAAGGCACGG +
Preference number: 4 (lower is better)
Translates to: SLQIQPLLGVRFSKGTRVPTATG*PSRKAR
Trigger: CCGTGCCTTCCTACTTGGTCATCCTGTGGCTGTAGG...GACCCTTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATCTGGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR GCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCATGCTTCCCTCAAGCTaGGTCGCTCCCGGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVMLPSS*VAPGPL
Trigger: CAGCGGACCGGGAGCGACGCAGCTTGAGGGAAGCAT...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273395.8
ENST00000355385.7
CDS-3UTR GCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAAGCCCAAGATCACAGTaGCTCCGGGCTTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPSPRSQ*LRASGR
Trigger: CCGTCCAGAAGCCCGGAGGCACTGTGATCTTGGGCT...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTCACTGGGTTGTAGGCTaGACACTTGTACATGCCCTC +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCHWVVG*TLVHAL
Trigger: GAGGGCATGTACAAGTGTGCAGCCTACAACCCAGTG...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCCCATGCAGCGGTAGGTaGCTGAGTCCTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVPCSGR*LSPPRW
Trigger: CCAGCGAGGAGGACTCAGGCACCTACCGCTGCATGG...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTCCCCATTGTCGGCCATaGAGCGGTAGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPPHCRP*SGRCLS
Trigger: ACTCAGGCACCTACCGCTGCATGGCCGACAATGGGG...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCCCCCATTGTCGGCCATaGAGCGGTAGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIPHCRP*SGRCLS
Trigger: ACTCAGGCACCTACCGCTGCATGGCCGACAATGGGG...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCATCTGCTCAGGGTTaGCGAGTTTGGAGGGTGATA +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCASAQG*RVWRVI
Trigger: TATCACCCTCCAAACTCGGCAACCCTGAGCAGATGC...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTTCGTCTCTCTGGATCTaGTGCTCTTTGCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCSSLWI*CSLLAM
Trigger: CATGGCCAGCAAAGAGCAGCAGATCCAGAGAGACGA...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCGGTCTGGCTGGCTGCTaGTCTGGGGACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLGLAGC*SGDWLQ
Trigger: CTGGAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACC...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCGTGGTCTGGCTGGCTaGTGCTCTGGGGACTGGCTC +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLRGLAG*CSGDWL
Trigger: GAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACCACG...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCGGTGTTGTTGTTACTTaGTGGGATGTACATCCACTT +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPGVVVT*WDVHPL
Trigger: AAGTGGATGTACATCCCAGCAAGTAACAACAACACC...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCAGCCTCGCCTGCCACTaGAGAGGCCCCAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVSLACH*RGPRLG
Trigger: TCCTAACCTGGGGCCTCTGCAGTGGCAGGCGAGGCT...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TCACTCCAGATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCACAAGGGTCGACTACACGTGGCCCTaGCCATGTCTCTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SLQIQPLLGVRFSKGTRVDYTWP*PCLLVS
Trigger: GGACACCAAGAGACATGGGCAGGGCCACGTGTAGTC...GACCCTTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATCTGGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGAGATACTGCCGTCCCTaGCAACACTCCACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWRYCRP*QHSTSS
Trigger: AGAAGAAGTGGAGTGTTGCCAGGGACGGCAGTATCT...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273395.8
ENST00000355385.7
CDS-3UTR CCA 90 bp ACGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCCAAAGCAGCCTGCTGTaGCTAGGAGGAGGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: TEQFCHVKFCHALTNSPLQSSLL*LGGGKP
Trigger: TGGCTTGCCTCCTCCTAGCCACAGCAGGCTGCTTTG...GAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCATGACGAGGGTCCCGTaGGTGATGAGGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVMTRVP*VMRTPR
Trigger: TCTGGGTGTCCTCATCACCCACGGGACCCTCGTCAT...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTAGACACTCACTCCAGATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCATCCGGGCCACACACTaGTACCGTCCCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: CRHSLQIQPLLGVRFSKGIRATH*YRPTVW
Trigger: CCACACTGTGGGACGGTACCAGTGTGTGGCCCGGAT...GCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATCTGGAGTGAGTGTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCATCCGGGCCACACACTaGTACCGTCCCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIIRATH*YRPTVW
Trigger: CCACACTGTGGGACGGTACCAGTGTGTGGCCCGGAT...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTGGCTAGTGTCACAGTaGCTGGCACGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPWLVSQ*LARWPQ
Trigger: CTGTGGCCAGCGTGCCAGCCACTGTGACACTAGCCA...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGGCTAGTGTCACAGTaGCTGGCACGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIWLVSQ*LARWPQ
Trigger: CTGTGGCCAGCGTGCCAGCCACTGTGACACTAGCCA...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTACGCTGTACCGGACCTaGGCTTTGGGGTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPTLYRT*ALGWLS
Trigger: TGAGAGCCACCCCAAAGCCCAGGTCCGGTACAGCGT...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCGATGGTTTGGGCCTCTaGGGGGTAGATGATGCGGGC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIDGLGL*GVDDAG
Trigger: GCCCGCATCATCTACCCCCCAGAGGCCCAAACCATC...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAGTAAGCTTGGCACTCTaGCCCCAGGGGATGACCAGC +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPVSLAL*PQGMTS
Trigger: GCTGGTCATCCCCTGGGGCCAGAGTGCCAAGCTTAC...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAAGCTGGACTACGGCATaGGCGCTCCCAACCTCGTTC +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPSWTTA*ALPTSF
Trigger: GAACGAGGTTGGGAGCGCCCATGCCGTAGTCCAGCT...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCTGGAGGTCCGCAGCTaGACTACGGCATGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLLEVRS*TTAWAL
Trigger: GAGCGCCCATGCCGTAGTCCAGCTGCGGACCTCCAG...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCGGGTTATGCTTGGCCTaGAGGTCCGCAGCTGGACTA +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVGLCLA*RSAAGL
Trigger: TAGTCCAGCTGCGGACCTCCAGGCCAAGCATAACCC...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCACCTTGGGGTTATGCTTaGCCTGGAGGTCCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPPWGYA*PGGPQL
Trigger: CAGCTGCGGACCTCCAGGCCAAGCATAACCCCAAGG...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCGGAGGCCGTGGAGATaGTGGGCCTGTCGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLRRPWR*WACREL
Trigger: AAGCTCCCGACAGGCCCACCATCTCCACGGCCTCCG...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCAGGTCTCGGAGGCCGTaGAGATGGTGGGCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLRSRRP*RWWACR
Trigger: CCGACAGGCCCACCATCTCCACGGCCTCCGAGACCT...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAGGCAGTCGACCAGGCTaGCCAGAAGACTTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPGSRPG*PEDFRA
Trigger: AGCTCGGAAGTCTTCTGGCCAGCCTGGTCGACTGCC...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCGGTAGGGCTGTCCACTaGCCTGGTGGCCTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLGRAVH*PGGLGV
Trigger: GACTCCCAGGCCACCAGGCCAGTGGACAGCCCTACC...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GGGAGAGCTGCATTCCAGGTTCCTGTCCTACGTAGGCCCCTACGGGGTGCTGGGCTAAATTGTGAGAGGTaGTGTTTCAAAAGACACACG +
Preference number: 4 (lower is better)
Translates to: GRAAFQVPVLRRPLRGAGLNCER*CFKRHT
Trigger: CGTGTGTCTTTTGAAACACCACCTCTCACAATTTAG...CCCAGCACCCCGTAGGGGCCTACGTAGGACAGGAACCTGGAATGCAGCTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR CCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTTGCCAGCTTATCTGTaGGCCTCCTGCAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPLPAYL*ASCSLA
Trigger: GGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAA...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAGCCGAGTTTGGAGGGTaGTACAGGAGGTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPAEFGG*YRRCAS
Trigger: ACTGGCACACCTCCTGTATCACCCTCCAAACTCGGC...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCCCACACCAGTTCATATaGGTCTGTCTTGGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIPHQFI*VCLGGA
Trigger: CGCACCTCCAAGACAGACTCATATGAACTGGTGTGG...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCCAGGTCACGTACACTaGGGTCTCGGAGGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLPGHVH*GLGGRG
Trigger: TCCACGGCCTCCGAGACCTCAGTGTACGTGACCTGG...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCCTGGCTGCAGGTGGCTaGTGGAGTGCCAGTACTTGT +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAILAAGG*WSASTC
Trigger: ACAAGTACTGGCACTCCATCAGCCACCTGCAGCCAG...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCACTTGGGACCCCTCGTaGTCTGGTGACTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAITWDPS*SGDFGG
Trigger: ACCCCCAAAGTCACCAGATCACGAGGGGTCCCAAGT...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp AAAGACACACGCACCAGTGGCCCCGGGGAGAGCTGCATTCCAGGTTCCTGTCCTCTTCTGCCTAAATTGTaGGAGGTGGTGTTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: KDTRTSGPGESCIPGSCPLLPKL*EVVFQK
Trigger: CTTTTGAAACACCACCTCTCACAATTTAGGCAGAAG...AGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCCACTGGTGCGTGTGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR TCA 90 bp CAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCTGTAGACCAGGAAGCTTGTTCTaGAACTCTGCTGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: QFCHVKFCHALTNSPLCRPGSLF*NSAAAG
Trigger: GCCGGCTGCAGCAGAGTTTCAGAACAAGCTTCCTGG...TCTACAGAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR GCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCAAACTCTTTCACCTTTaGCCCAGCCCCTCAGACACC +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIKLFHL*PSPSDT
Trigger: GGTGTCTGAGGGGCTGGGGCAAAGGTGAAAGAGTTT...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273395.8
ENST00000355385.7
CDS-3UTR GCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTCTGCACACTTGTACATaGCCTCGTCCTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPLHTCT*PRPPGW
Trigger: CCAGCCAGGAGGACGAGGGCATGTACAAGTGTGCAG...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTGCCCCCTCAGCATCTaGTCAGGGTTGCCGAGTTTG +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPCPLSI*SGLPSL
Trigger: CAAACTCGGCAACCCTGAGCAGATGCTGAGGGGGCA...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCAGGTGGCTGATGGAGTaGCAGTACTTGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVRWLME*QYLSPS
Trigger: GGAAGGGGACAAGTACTGGCACTCCATCAGCCACCT...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCATCTGCCTCAGCAGGCTaGTGGTGTCACTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPSASAG*WCHSAA
Trigger: AGCAGCAGAGTGACACCAGCAGCCTGCTGAGGCAGA...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTTGCCAAGATGGGTCTaGCTCAGCAGGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPLPRWV*LSRLLV
Trigger: CACCAGCAGCCTGCTGAGGCAGACCCATCTTGGCAA...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTTGCCAAGATGGGTCTaGCTCAGCAGGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAILPRWV*LSRLLV
Trigger: CACCAGCAGCCTGCTGAGGCAGACCCATCTTGGCAA...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCGGCCCCGGGGAGAGCTaGATTCCAGGTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLGPGES*IPGSCP
Trigger: AGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCC...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCCAGGCTGTGATACCGTaGCCCTTGCTGTTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVQAVIP*PLLFPH
Trigger: ATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp ATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCACAAGGGTCCCCCATCACGGTTACATTCATCCTTaGAGGTTCCACCACGCAGCC +
Preference number: 4 (lower is better)
Translates to: IQPLLGVRFSKGTRVPHHGYIHP*RFHHAA
Trigger: GGCTGCGTGGTGGAACCTCCAAGGATGAATGTAACC...GTGATGGGGGACCCTTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCGGTTACATTCATCCTTaGAGGTTCCACCACGCAGCC +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIGYIHP*RFHHAA
Trigger: GGCTGCGTGGTGGAACCTCCAAGGATGAATGTAACC...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCATGACGAGGGTCCCGTaGGTGATGAGGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIMTRVP*VMRTPR
Trigger: TCTGGGTGTCCTCATCACCCACGGGACCCTCGTCAT...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTTACCGTCCCACAGTGTaGTTGTTAAGGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCYRPTV*LLRAVM
Trigger: CATCACTGCCCTTAACAACCACACTGTGGGACGGTA...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GCCCACGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTACCGTCCCACAGTGTaGTTGTTAAGGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: AHGTVLPCQVLPCTDQFPYRPTV*LLRAVM
Trigger: CATCACTGCCCTTAACAACCACACTGTGGGACGGTA...GGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTGGCTAGTGTCACAGTaGCTGGCACGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVWLVSQ*LARWPQ
Trigger: CTGTGGCCAGCGTGCCAGCCACTGTGACACTAGCCA...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCACAGGGGATGACCAGCTaGGATAGCTCCATGGTGACC +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPQGMTS*DSSMVT
Trigger: GGTCACCATGGAGCTATCCCAGCTGGTCATCCCCTG...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAGCGGTGCTGGTTGGCTaGAATGCCAGAGATGGTCCA +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPAVLVG*NARDGP
Trigger: TGGACCATCTCTGGCATTCCAGCCAACCAGCACCGC...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCATCAGGCGGTGCTGGTTaGCTGGAATGCCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPSGGAG*LECQRW
Trigger: CCATCTCTGGCATTCCAGCCAACCAGCACCGCCTGA...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCACGGAAGGACTGGATTaGGAACCCACCATTCCCACG +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVTEGLD*EPTIPT
Trigger: CGTGGGAATGGTGGGTTCCCAATCCAGTCCTTCCGT...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTATCCATTGCCAAGATaGGTCTGCCTCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIYPLPR*VCLSRL
Trigger: CAGCCTGCTGAGGCAGACCCATCTTGGCAATGGATA...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCTCCTCCACTCACTTaGCAGGAGTCAGGACTGTCC +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVSPPLT*QESGLS
Trigger: GGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGA...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GGGGTGCTGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTCCTAAATTGTGAGAGGTaGTGTTTCAAAAGACACACG +
Preference number: 4 (lower is better)
Translates to: GVLGTPVSSTHLAGVRTVLNCER*CFKRHT
Trigger: CGTGTGTCTTTTGAAACACCACCTCTCACAATTTAG...GACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCAGCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR CCA 90 bp TCACTCCAGATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCACAAGGGTCAGGTGTGTGAGCAGTTaGGACAGTGCACCTACAGCC +
Preference number: 4 (lower is better)
Translates to: SLQIQPLLGVRFSKGTRVRCVSS*DSAPTA
Trigger: GGCTGTAGGTGCACTGTCCCAACTGCTCACACACCT...GACCCTTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATCTGGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR TCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTTGTATCACAAAGGTCTaGAGCCAACGTCCCATAAGC +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCCITKV*SQRPIS
Trigger: GCTTATGGGACGTTGGCTTCAGACCTTTGTGATACA...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCGGAGGCAAGCCAGTGTaGCCTCAGGCCTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLGGKPV*PQASFL
Trigger: GAGGAATGAGGCCTGAGGTCACACTGGCTTGCCTCC...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCAATCTGGAGGTTCCCTaGGGGCATGATCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLINLEVP*GHDQVV
Trigger: AACTACCTGATCATGCCCTCAGGGAACCTCCAGATT...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTCTTGTTGTAGCCGGTaGCACTGGACCCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPSCCSR*HWTHPW
Trigger: CCAAGGATGGGTCCAGTGTCACCGGCTACAACAAGA...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCGCCGAGTTTGGAGGGTaGTACAGGAGGTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVAEFGG*YRRCAS
Trigger: ACTGGCACACCTCCTGTATCACCCTCCAAACTCGGC...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTCCCCTCGTGATCTGGTaGCTTTGGGGGTCATATCCA +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPPLVIW*LWGSYP
Trigger: TGGATATGACCCCCAAAGTCACCAGATCACGAGGGG...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCATGGGGGCCCTGAGTaGAATGGAGGGTCCCACACT +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLHGGPE*NGGSHT
Trigger: AGTGTGGGACCCTCCATTTCACTCAGGGCCCCCATG...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCCCTCGTTCTCGGCCATaGACTGGTAGACGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVPRSRP*TGRRLR
Trigger: ACGAAGGCGTCTACCAGTGCATGGCCGAGAACGAGG...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTGCCAGCTCAGCATCCTaGCATAGCCTTGGGGTTATG +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPASSAS*HSLGVM
Trigger: CATAACCCCAAGGCTATGGCAGGATGCTGAGCTGGC...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAGGTGATATAAGGACCTaGCACGGGCCTCTCGTACAC +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPGDIRT*HGPLVH
Trigger: GTGTACGAGAGGCCCGTGGCAGGTCCTTATATCACC...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCGGTGATATAAGGACCTaGCACGGGCCTCTCGTACAC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIGDIRT*HGPLVH
Trigger: GTGTACGAGAGGCCCGTGGCAGGTCCTTATATCACC...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAAGGTGGCTGATGGAGTaGCAGTACTTGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPRWLME*QYLSPS
Trigger: GGAAGGGGACAAGTACTGGCACTCCATCAGCCACCT...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTGCCTCAGCAGGCTaGTGGTGTCACTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVSASAG*WCHSAA
Trigger: AGCAGCAGAGTGACACCAGCAGCCTGCTGAGGCAGA...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCGGGGGTCATATCCATTaGCAAGATGGGTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVGGHIH*QDGSAS
Trigger: TGAGGCAGACCCATCTTGGCAATGGATATGACCCCC...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TCACTCCAGATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCACAAGGGTCTGTCCTGTCTCTCCCTaGTCCGACTGTAACTGTGGT +
Preference number: 4 (lower is better)
Translates to: SLQIQPLLGVRFSKGTRVCPVSP*SDCNCG
Trigger: ACCACAGTTACAGTCGGAGCAGGGAGAGACAGGACA...GACCCTTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATCTGGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR GCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGAACAATTCCTTCTTTTaGTTCTCCTGCCTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWNNSFF*FSCLGA
Trigger: GGCTCCTAGGCAGGAGAAGCAAAAGAAGGAATTGTT...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCATGACGAGGGTCCCGTaGGTGATGAGGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVMTRVP*VMRTPR
Trigger: TCTGGGTGTCCTCATCACCCACGGGACCCTCGTCAT...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTCCTCGTCCTCCTGGCTaGCATTCACAATCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPPRPPG*HSQSGG
Trigger: ACCTCCAGATTGTGAATGCCAGCCAGGAGGACGAGG...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCACCTCGTCCTCCTGGCTaGCATTCACAATCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPPRPPG*HSQSGG
Trigger: ACCTCCAGATTGTGAATGCCAGCCAGGAGGACGAGG...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCCACTTCCTGGGTCACTaGGTTGTAGGCTGCACACTT +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVHFLGH*VVGCTL
Trigger: AAGTGTGCAGCCTACAACCCAGTGACCCAGGAAGTG...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTTCCAGAATGAGACTCTaGCCTTTGGTGACGATGATG +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCSRMRL*PLVTMM
Trigger: CATCATCGTCACCAAAGGCCAGAGTCTCATTCTGGA...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCACAGGGTTGCCGAGTTTaGAGGGTGATACAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPQGCRV*RVIQEV
Trigger: CACCTCCTGTATCACCCTCCAAACTCGGCAACCCTG...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTCAGGGTTGCCGAGTTTaGAGGGTGATACAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPQGCRV*RVIQEV
Trigger: CACCTCCTGTATCACCCTCCAAACTCGGCAACCCTG...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTCTGGAATGCCAGAGATaGTCCAATCGTCAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCLECQR*SNRQRN
Trigger: ATTCCTCTGACGATTGGACCATCTCTGGCATTCCAG...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATCGGCCGTGGTCTGGCTaGCTGCTGCTCTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYRPWSG*LLLWGL
Trigger: CAGTCCCCAGAGCAGCAGCCAGCCAGACCACGGCCG...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATAAGGGGCGGCTGTGGTaGGGCCAGAGTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYKGRLW*GQSWGW
Trigger: CCACCCCCAACTCTGGCCCCACCACAGCCGCCCCTT...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCTGTCCACTGGCCTGGTaGCCTGGGAGTCCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLCPLAW*PGSPPN
Trigger: ATTGGGAGGACTCCCAGGCCACCAGGCCAGTGGACA...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCGCAGCAGCTGGTGAGTaGAGTCGTCGGGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLAAAGE*SRRAVC
Trigger: ACACACTGCCCGACGACTCCACTCACCAGCTGCTGC...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTCTCCTCCACTCACTTaGCAGGAGTCAGGACTGTCC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAISPPLT*QESGLS
Trigger: GGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGA...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGCTAAATTGTGAGAGGTaGTGTTTCAAAAGACACACG +
Preference number: 4 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLLNCER*CFKRHT
Trigger: CGTGTGTCTTTTGAAACACCACCTCTCACAATTTAG...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTGTGCGGTGCTTTCCTaGGTGACTCCTGTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPCAVLS*VTPVRW
Trigger: CCACCTAACAGGAGTCACCCAGGAAAGCACCGCACA...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCATGTGCGGTGCTTTCCTaGGTGACTCCTGTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPCAVLS*VTPVRW
Trigger: CCACCTAACAGGAGTCACCCAGGAAAGCACCGCACA...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp ACGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCAAGGAGCAGACTCACTaGCTAGTGTCACAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TEQFCHVKFCHALTNSPLKEQTH*LVSQWL
Trigger: CAGCCACTGTGACACTAGCCAGTGAGTCTGCTCCTT...GAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp TGTAGACACTCACTCCAGATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCAGGGTCCCCCATCACTaGGCATTACTAGGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: CRHSLQIQPLLGVRFSKGRVPHH*ALLGSY
Trigger: GTAGCTGCCTAGTAATGCCCAGTGATGGGGGACCCT...GCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATCTGGAGTGAGTGTCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR TCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGCAGCGGTAGGTGCCTaGGTCCTCCTCGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYAAVGA*VLLAGG
Trigger: ACCACCAGCGAGGAGGACTCAGGCACCTACCGCTGC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCCCACACCAGTTCATATaGGTCTGTCTTGGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIPHQFI*VCLGGA
Trigger: CGCACCTCCAAGACAGACTCATATGAACTGGTGTGG...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCACTTGGGACCCCTCGTaGTCTGGTGACTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLTWDPS*SGDFGG
Trigger: ACCCCCAAAGTCACCAGATCACGAGGGGTCCCAAGT...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATCGTTGGCAGCAGTCGTaGTGGGGCTGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYRWQQS*WGCSSW
Trigger: CCAGCTGCTGCAGCCCCATCACGACTGCTGCCAACG...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGCTTCTGCCTAAATTGTaGGAGGTGGTGTTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWLLPKL*EVVFQK
Trigger: CTTTTGAAACACCACCTCTCACAATTTAGGCAGAAG...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp ACGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCAGCCTCTACTTGGAGTaGGGTTTTCCAAGGGCACAA +
Preference number: 4 (lower is better)
Translates to: TEQFCHVKFCHALTNSPLSLYLE*GFPRAQ
Trigger: TTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCT...GAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR TCA 90 bp TATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAACTCCTCTTCCAGCTATaGCTATGTCAAGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: YNPGLRTMLAPHRETGGQLLFQL*LCQVTW
Trigger: CCAAGTGACTTGACATAGTCATAGCTGGAAGAGGAG...TTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR GCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTCACACAAAGAGATACTaGCGTCCCTGGCAACACTCC +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPHTKRY*RPWQHS
Trigger: GGAGTGTTGCCAGGGACGGCAGTATCTCTTTGTGTG...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273395.8
ENST00000355385.7
CDS-3UTR GCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCGTGGCAGGCAATGACTaGTGTGTTTCCCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIVAGND*CVSLIH
Trigger: GTGGATGAGGGAAACACAGCAGTCATTGCCTGCCAC...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCTGCACACTTGTACATaGCCTCGTCCTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLLHTCT*PRPPGW
Trigger: CCAGCCAGGAGGACGAGGGCATGTACAAGTGTGCAG...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCGCCAGCTCAGCATCCTaGCATAGCCTTGGGGTTATG +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVASSAS*HSLGVM
Trigger: CATAACCCCAAGGCTATGGCAGGATGCTGAGCTGGC...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCTTGCCAAGATGGGTCTaGCTCAGCAGGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLLPRWV*LSRLLV
Trigger: CACCAGCAGCCTGCTGAGGCAGACCCATCTTGGCAA...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTTACAGAGATATGTTaGCACGGATTATTGATTCTG +
Preference number: 4 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPFTEIC*HGLLIL
Trigger: CAGAATCAATAATCCGTGGCAACATATCTCTGTAAA...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCTGTAGATGTCCTGTCTCTCCCTaGTCCGACTGTAACTGTGGT +
Preference number: 4 (lower is better)
Translates to: QFCHVKFCHALTNSPLCRCPVSP*SDCNCG
Trigger: ACCACAGTTACAGTCGGAGCAGGGAGAGACAGGACA...TCTACAGAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR GCA 90 bp GTCCCCCATCACTGGGCATTACTAGGCAGCTACTGTTCTGATTTGACATTTCTGCCTTCGGACTATGCTTaGCCCTCACAGAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: VPHHWALLGSYCSDLTFLPSDYA*PSQRDR
Trigger: CCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGG...CAGAAATGTCAAATCAGAACAGTAGCTGCCTAGTAATGCCCAGTGATGGGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR GCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCTGTGCGCGCCGTGTGTaGGCGTGTGTGTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLCARRV*ACVSFL
Trigger: CAGAAAAGACACACACGCGCACACACGGCGCGCACA...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTCCACACGGAAGGACTaGATTGGGAACCCACCATTC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAISTRKD*IGNPPF
Trigger: GAATGGTGGGTTCCCAATCCAGTCCTTCCGTGTGGA...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGTTGTTGTTACTTGCTaGGATGTACATCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWVVVTC*DVHPLE
Trigger: CTCAAGTGGATGTACATCCCAGCAAGTAACAACAAC...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGATAGGGCAGGTCGCTaGAGCGAGCCACCATGGCCC +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYDRAGR*SEPPWP
Trigger: GGGCCATGGTGGCTCGCTCCAGCGACCTGCCCTATC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGGTAGGGCTGTCCACTaGCCTGGTGGCCTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYGRAVH*PGGLGV
Trigger: GACTCCCAGGCCACCAGGCCAGTGGACAGCCCTACC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCCAGCCCCTATTCATGTaGATCCCATTAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIQPLFM*IPLAQA
Trigger: GGCCTGTGCTAATGGGATCCACATGAATAGGGGCTG...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCGCCTCAGCAGGCTGCTaGTGTCACTCTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLASAGC*CHSAAE
Trigger: TTCAGCAGCAGAGTGACACCAGCAGCCTGCTGAGGC...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATCTCCTCACCCCTGACTaGCCCACAGCAGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYLLTPD*PTAAGC
Trigger: GCAGCCTGCTGCTGTGGGCCAGTCAGGGGTGAGGAG...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCTCCACTCACTTaGCAGGAGTCAGGACTGTCC +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVSPPLT*QESGLS
Trigger: GGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGA...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCATCCAGCCATCTGTGTaGGTGTCTCCAGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIIQPSV*VSPGCD
Trigger: ATCACAGCCTGGAGACACCCACACAGATGGCTGGAT...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CACATGGAAATGGAATTTACCAGAATTATTCAGTTGGGAGGGACCTTAGAAGCCACAGGAGGCCAAGTCTaGGCTGGGTGGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: HMEMEFTRIIQLGGTLEATGGQV*AGWALS
Trigger: GGACAGAGCCCACCCAGCCCAGACTTGGCCTCCTGT...GGCTTCTAAGGTCCCTCCCAACTGAATAATTCTGGTAAATTCCATTTCCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR TCA 90 bp ATAAGTATAATGGCAACTAGAAACACCTGTCTTGGTAAGGCTCCTCTTCCAGCTGGAGGCAAGCCAGTGTaGCCTCAGGCCTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: ISIMATRNTCLGKAPLPAGGKPV*PQASFL
Trigger: GAGGAATGAGGCCTGAGGTCACACTGGCTTGCCTCC...AGCTGGAAGAGGAGCCTTACCAAGACAGGTGTTTCTAGTTGCCATTATACTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR TCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCCGTCAGAGGAATTTGTaGCCTGCTTGCGGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIRQRNL*PACGVS
Trigger: TGAAACACCGCAAGCAGGTCACAAATTCCTCTGACG...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273395.8
CDS-3UTR TCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGCAGCATGGGGGCCCTaGGTGAAATGGAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYAAWGP*VKWRVP
Trigger: TGGGACCCTCCATTTCACTCAGGGCCCCCATGCTGC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp ACGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCTCCCTGGCAACACTCTaGAGTTTAGTCCAGATTCCA +
Preference number: 4 (lower is better)
Translates to: TEQFCHVKFCHALTNSPLSLATL*SLVQIP
Trigger: TGGAATCTGGACTAAACTTCAGAGTGTTGCCAGGGA...GAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484034.1
CDS-3UTR GCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTTCCACTTCAATCACGTaGTGCACATCTAACTTGAAG +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCSTSIT*CTSNLK
Trigger: CTTCAAGTTAGATGTGCAGCACGTGATTGAAGTGGA...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCCGCACAGTTGTAAGCTaGCATCTCCACTTCATACAA +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIRTVVS*HLHFIQ
Trigger: TTGTATGAAGTGGAGATGGCAGCTTACAACTGTGCG...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTGGGATCCTTCCTCTTaGCAGCTTATCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVWDPSS*QLICGP
Trigger: AGGCCCACAGATAAGCTGGCAAGAGGAAGGATCCCA...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGTAGACACTCACTCCAGATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCCACACAAAGAGATACTaGCGTCCCTGGCAACACTCT +
Preference number: 4 (lower is better)
Translates to: CRHSLQIQPLLGVRFSKGHTKRY*RPWQHS
Trigger: AGAGTGTTGCCAGGGACGGCAGTATCTCTTTGTGTG...GCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATCTGGAGTGAGTGTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484034.1
CDS-3UTR GCA 90 bp CAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCTGTAGACCCACGGAACAGTTCTaGCATGTCAAGTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: QFCHVKFCHALTNSPLCRPTEQF*HVKFCH
Trigger: ATGGCAGAACTTGACATGGCAGAACTGTTCCGTGGG...TCTACAGAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp TGTAGACACTCACTCCAGATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCTACCGTCCCACAGTGTaGTTGTTAAGGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: CRHSLQIQPLLGVRFSKGYRPTV*LLRAVM
Trigger: CATCACTGCCCTTAACAACCACACTGTGGGACGGTA...GCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATCTGGAGTGAGTGTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp ATAAGTATAATGGCAACTAGAAACACCTGTCTTGGTAAGGCTCCTCTTCCAGCTATCCGGGCCACACACTaGTACCGTCCCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: ISIMATRNTCLGKAPLPAIRATH*YRPTVW
Trigger: CCACACTGTGGGACGGTACCAGTGTGTGGCCCGGAT...AGCTGGAAGAGGAGCCTTACCAAGACAGGTGTTTCTAGTTGCCATTATACTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATACCGGACCTGGGCTTTaGGGTGGCTCTCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYTGPGL*GGSQAG
Trigger: ACCTGCCTGAGAGCCACCCCAAAGCCCAGGTCCGGT...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCCTCGTCCTCCTGGCTaGCATTCACAATCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLPRPPG*HSQSGG
Trigger: ACCTCCAGATTGTGAATGCCAGCCAGGAGGACGAGG...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGGGTTGCCGAGTTTaGAGGGTGATACAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLQGCRV*RVIQEV
Trigger: CACCTCCTGTATCACCCTCCAAACTCGGCAACCCTG...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATCTGCCCCTTCTCTCCTaGACACTGCGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYLPLLS*TLRGSR
Trigger: CCTGCTTCCCCGCAGTGTCCAGGAGAGAAGGGGCAG...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCATACGGGCAGGAGGGTaGAAGGGCACTTCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLIRAGG*KGTSRK
Trigger: TTTCCTCGAAGTGCCCTTCCACCCTCCTGCCCGTAT...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTGGGAGTCCTCCCAATaGCACCATAGTATACGGGCA +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVWESSQ*HHSIRA
Trigger: TGCCCGTATACTATGGTGCCATTGGGAGGACTCCCA...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTATCCATTGCCAAGATaGGTCTGCCTCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVYPLPR*VCLSRL
Trigger: CAGCCTGCTGAGGCAGACCCATCTTGGCAATGGATA...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATAGACACACGCACCAGTaGCCCCGGGGAGAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYRHTHQ*PRGELH
Trigger: ATGCAGCTCTCCCCGGGGCCACTGGTGCGTGTGTCT...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCCTAAATTGTGAGAGGTaGTGTTTCAAAAGACACACG +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSLNCER*CFKRHT
Trigger: CGTGTGTCTTTTGAAACACCACCTCTCACAATTTAG...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCGATGAACCATGTGCCTaGGATCCTTCCTCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVDEPCA*DPSSCQ
Trigger: CTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATC...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCATCCAGCCATCTGTGTaGGTGTCTCCAGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVIQPSV*VSPGCD
Trigger: ATCACAGCCTGGAGACACCCACACAGATGGCTGGAT...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTCCCCCATCACTGGGCATTACTAGGCAGCTACTGTTCTGATTTGACATTTCTGAAGGAGCAGACTCACTaGCTAGTGTCACAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VPHHWALLGSYCSDLTFLKEQTH*LVSQWL
Trigger: CAGCCACTGTGACACTAGCCAGTGAGTCTGCTCCTT...CAGAAATGTCAAATCAGAACAGTAGCTGCCTAGTAATGCCCAGTGATGGGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp TCACTCCAGATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCACAAGGGTCGATACAGCCTCTACTTaGAGTGAGGTTTTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: SLQIQPLLGVRFSKGTRVDTAST*SEVFQG
Trigger: CCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATC...GACCCTTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATCTGGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp ATAAGTATAATGGCAACTAGAAACACCTGTCTTGGTAAGGCTCCTCTTCCAGCTAGGCCAAGTCTGGGCTaGGTGGGCTCTGTCCAGACT +
Preference number: 4 (lower is better)
Translates to: ISIMATRNTCLGKAPLPARPSLG*VGSVQT
Trigger: AGTCTGGACAGAGCCCACCCAGCCCAGACTTGGCCT...AGCTGGAAGAGGAGCCTTACCAAGACAGGTGTTTCTAGTTGCCATTATACTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485230.5
3UTR CAA 72 bp GTTCTAATATTTATAATCCAGGCCTTCGGACTATGCTaGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VLIFIIQAFGLC*PLTERQEAKSG
Trigger: CCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATAAATATTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR TCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTATCACAAAGGTCTaGAGCCAACGTCCCATAAGC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAICITKV*SQRPIS
Trigger: GCTTATGGGACGTTGGCTTCAGACCTTTGTGATACA...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGGAGGCAAGCCAGTGTaGCCTCAGGCCTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYGGKPV*PQASFL
Trigger: GAGGAATGAGGCCTGAGGTCACACTGGCTTGCCTCC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAGCTGCACATCTAACTTaGAGTCCTGGAGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPAAHLT*SPGDWL
Trigger: TAGCCAATCTCCAGGACTTCAAGTTAGATGTGCAGC...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGTCCAGTTCGGAAGGTaGCCATGGCTGTCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYVQFGR*PWLSGP
Trigger: AGGGCCAGACAGCCATGGTCACCTTCCGAACTGGAC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TATGTTCTAATATTTATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGACACAACACGCTCGGTaGCACCGGGGACACACAACA +
Preference number: 4 (lower is better)
Translates to: YVLIFIIQAFGLCLPLTETQHAR*HRGHTT
Trigger: TGTTGTGTGTCCCCGGTGTCACCGAGCGTGTTGTGT...CTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATAAATATTAGAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR GCA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCACTTCAATCACGTGCTaGACATCTAACTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PHARDEPCAWDPSSCQLITSITC*TSNLKS
Trigger: GGACTTCAAGTTAGATGTGCAGCACGTGATTGAAGT...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCGTGGCAGGCAATGACTaGTGTGTTTCCCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLVAGND*CVSLIH
Trigger: GTGGATGAGGGAAACACAGCAGTCATTGCCTGCCAC...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTCACACAAAGAGATACTaGCGTCCCTGGCAACACTTT +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPHTKRY*RPWQHF
Trigger: AAAGTGTTGCCAGGGACGGCAGTATCTCTTTGTGTG...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495514.5
CDS-3UTR GCA 90 bp TATGTTCTAATATTTATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGGACTACACGTGGCCCTaGCCATGTCTCTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: YVLIFIIQAFGLCLPLTEDYTWP*PCLLVS
Trigger: GGACACCAAGAGACATGGGCAGGGCCACGTGTAGTC...CTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATAAATATTAGAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCAGACTTCATGGGTCATaGGTTCCAGGAAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIRLHGS*VPGSLF
Trigger: GAACAAGCTTCCTGGAACCCATGACCCATGAAGTCT...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAAGACTTCATGGGTCATaGGTTCCAGGAAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPRLHGS*VPGSLF
Trigger: GAACAAGCTTCCTGGAACCCATGACCCATGAAGTCT...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTAGACTTCATGGGTCATaGGTTCCAGGAAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPRLHGS*VPGSLF
Trigger: GAACAAGCTTCCTGGAACCCATGACCCATGAAGTCT...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCAGATACTGCCGTCCCTaGCAACACTCCACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVRYCRP*QHSTSS
Trigger: AGAAGAAGTGGAGTGTTGCCAGGGACGGCAGTATCT...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273395.8
ENST00000355385.7
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCGGTTACATTCATCCTTaGAGGTTCCACCACGCAGCC +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLGYIHP*RFHHAA
Trigger: GGCTGCGTGGTGGAACCTCCAAGGATGAATGTAACC...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTACCGTCCCACAGTGTaGTTGTTAAGGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVYRPTV*LLRAVM
Trigger: CATCACTGCCCTTAACAACCACACTGTGGGACGGTA...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGATGGTTTGGGCCTCTaGGGGGTAGATGATGCGGGC +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYDGLGL*GVDDAG
Trigger: GCCCGCATCATCTACCCCCCAGAGGCCCAAACCATC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCATCCAGAATGAGACTCTaGCCTTTGGTGACGATGATG +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPSRMRL*PLVTMM
Trigger: CATCATCGTCACCAAAGGCCAGAGTCTCATTCTGGA...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTATAAAAGCCATGGATTaGGGTGTTGTTGTTACTTGC +
Preference number: 4 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCIKAMD*GVVVTC
Trigger: GCAAGTAACAACAACACCCCAATCCATGGCTTTTAT...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCAAGACTTCCGAGCTTTaGTCTCACAGATCATCACGT +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVKTSEL*SHRSSR
Trigger: ACGTGATGATCTGTGAGACCAAAGCTCGGAAGTCTT...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGCCCCTATTCATGTaGATCCCATTAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLQPLFM*IPLAQA
Trigger: GGCCTGTGCTAATGGGATCCACATGAATAGGGGCTG...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCTATCCATTGCCAAGATaGGTCTGCCTCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLYPLPR*VCLSRL
Trigger: CAGCCTGCTGAGGCAGACCCATCTTGGCAATGGATA...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCGCTGCACATCTAACTTaGAGTCCTGGAGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVAAHLT*SPGDWL
Trigger: TAGCCAATCTCCAGGACTTCAAGTTAGATGTGCAGC...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCCTTCTGCCTAAATTGTaGGAGGTGGTGTTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVLLPKL*EVVFQK
Trigger: CTTTTGAAACACCACCTCTCACAATTTAGGCAGAAG...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATTGCCCCCTCAGCATCTaGTCAGGGTTGCCGAGTTTG +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYCPLSI*SGLPSL
Trigger: CAAACTCGGCAACCCTGAGCAGATGCTGAGGGGGCA...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCGGTGTTGTTGTTACTTaGTGGGATGTACATCCACTT +
Preference number: 4 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVGVVVT*WDVHPL
Trigger: AAGTGGATGTACATCCCAGCAAGTAACAACAACACC...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TCTTTCTGGGATATCAGCTTCTGCCTAAATTGTGAGAGGTGGTGTTTCAAAAGATTGCCAAGATGGGTCTaGCTCAGCAGGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SFWDISFCLNCERWCFKRLPRWV*LSRLLV
Trigger: CACCAGCAGCCTGCTGAGGCAGACCCATCTTGGCAA...TCTTTTGAAACACCACCTCTCACAATTTAGGCAGAAGCTGATATCCCAGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR GCA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTTTACAGAGATATGTTaGCACGGATTATTGATTCTG +
Preference number: 4 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSFTEIC*HGLLIL
Trigger: CAGAATCAATAATCCGTGGCAACATATCTCTGTAAA...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TTTATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCATCCCTTTATCCCTTTaGCACACAGTTTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: FIIQAFGLCLPLTERQEAIPLSL*HTVSFS
Trigger: TGAAAAGGAAACTGTGTGGCAAAGGGATAAAGGGAT...GGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR GCA 90 bp AGTGAGCACATGGAAATGGAATTTACCAGAATTATTCAGTTGGGAGGGACCTTACTTGTTCTGAAACTCTaGTGCAGCCGGCGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SEHMEMEFTRIIQLGGTLLVLKL*CSRRLG
Trigger: TCCCAGGCGCCGGCTGCAGCAGAGTTTCAGAACAAG...TAAGGTCCCTCCCAACTGAATAATTCTGGTAAATTCCATTTCCATGTGCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCGTCGACAAGACTTCATaGGTCATGGGTTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLVDKTS*VMGSRK
Trigger: CTTCCTGGAACCCATGACCCATGAAGTCTTGTCGAC...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATCAAAGCAGCCTGCTGTaGCTAGGAGGAGGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYQSSLL*LGGGKP
Trigger: TGGCTTGCCTCCTCCTAGCCACAGCAGGCTGCTTTG...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATTGGCTCTCAGGCAGGTaGCAGGCAATGACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYWLSGR*QAMTAV
Trigger: CACAGCAGTCATTGCCTGCCACCTGCCTGAGAGCCA...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCCTGGAATGCCAGAGATaGTCCAATCGTCAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVLECQR*SNRQRN
Trigger: ATTCCTCTGACGATTGGACCATCTCTGGCATTCCAG...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATTCAGGCGGTGCTGGTTaGCTGGAATGCCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYSGGAG*LECQRW
Trigger: CCATCTCTGGCATTCCAGCCAACCAGCACCGCCTGA...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTAAGACTTCCGAGCTTTaGTCTCACAGATCATCACGT +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPKTSEL*SHRSSR
Trigger: ACGTGATGATCTGTGAGACCAAAGCTCGGAAGTCTT...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGCCTCAGCAGGCTGCTaGTGTCACTCTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYASAGC*CHSAAE
Trigger: TTCAGCAGCAGAGTGACACCAGCAGCCTGCTGAGGC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TATGTTCTAATATTTATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGGGTCCCCCATCACTaGGCATTACTAGGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: YVLIFIIQAFGLCLPLTERVPHH*ALLGSY
Trigger: GTAGCTGCCTAGTAATGCCCAGTGATGGGGGACCCT...CTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATAAATATTAGAACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp ACGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCCCGTCAGTGAGCACATaGAAATGGAATTTACCAGAA +
Preference number: 4 (lower is better)
Translates to: TEQFCHVKFCHALTNSPLPSVST*KWNLPE
Trigger: TTCTGGTAAATTCCATTTCCATGTGCTCACTGACGG...GAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR TCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATTCTTGTTGTAGCCGGTaGCACTGGACCCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYSCCSR*HWTHPW
Trigger: CCAAGGATGGGTCCAGTGTCACCGGCTACAACAAGA...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGGGATAGCTCCATGGTaGCCTCAGGGGGTTCAAACA +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYGIAPW*PQGVQT
Trigger: TGTTTGAACCCCCTGAGGTCACCATGGAGCTATCCC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTCCACTTCAATCACGTaGTGCACATCTAACTTGAAG +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPSTSIT*CTSNLK
Trigger: CTTCAAGTTAGATGTGCAGCACGTGATTGAAGTGGA...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGCCAGCTCAGCATCCTaGCATAGCCTTGGGGTTATG +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYASSAS*HSLGVM
Trigger: CATAACCCCAAGGCTATGGCAGGATGCTGAGCTGGC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATAGGTGGCTGATGGAGTaGCAGTACTTGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYRWLME*QYLSPS
Trigger: GGAAGGGGACAAGTACTGGCACTCCATCAGCCACCT...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATCAGGCTGTGATACCGTaGCCCTTGCTGTTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYQAVIP*PLLFPH
Trigger: ATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCATCTAACTTGAAGTCCTaGAGATTGGCTAGTGTCACA +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPSNLKS*RLASVT
Trigger: TGTGACACTAGCCAATCTCCAGGACTTCAAGTTAGA...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTCTAACTTGAAGTCCTaGAGATTGGCTAGTGTCACA +
Preference number: 4 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPSNLKS*RLASVT
Trigger: TGTGACACTAGCCAATCTCCAGGACTTCAAGTTAGA...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATACGGAAGGACTGGATTaGGAACCCACCATTCCCACG +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYTEGLD*EPTIPT
Trigger: CGTGGGAATGGTGGGTTCCCAATCCAGTCCTTCCGT...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCACTTCAATCACGTGCTaGACATCTAACTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVTSITC*TSNLKS
Trigger: GGACTTCAAGTTAGATGTGCAGCACGTGATTGAAGT...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATTCGTCTCTCTGGATCTaGTGCTCTTTGCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYSSLWI*CSLLAM
Trigger: CATGGCCAGCAAAGAGCAGCAGATCCAGAGAGACGA...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCGGTGTTGTTGTTACTTaGTGGGATGTACATCCACTT +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVGVVVT*WDVHPL
Trigger: AAGTGGATGTACATCCCAGCAAGTAACAACAACACC...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TATGTTCTAATATTTATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGATACTGCCGTCCCTaGCAACACTCCACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: YVLIFIIQAFGLCLPLTERYCRP*QHSTSS
Trigger: AGAAGAAGTGGAGTGTTGCCAGGGACGGCAGTATCT...CTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATAAATATTAGAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATTCCACACGGAAGGACTaGATTGGGAACCCACCATTC +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYSTRKD*IGNPPF
Trigger: GAATGGTGGGTTCCCAATCCAGTCCTTCCGTGTGGA...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCGTTGTTGTTACTTGCTaGGATGTACATCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVVVVTC*DVHPLE
Trigger: CTCAAGTGGATGTACATCCCAGCAAGTAACAACAAC...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCATAAAAGCCATGGATTaGGGTGTTGTTGTTACTTGC +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIIKAMD*GVVVTC
Trigger: GCAAGTAACAACAACACCCCAATCCATGGCTTTTAT...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCAAGACTTCCGAGCTTTaGTCTCACAGATCATCACGT +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLKTSEL*SHRSSR
Trigger: ACGTGATGATCTGTGAGACCAAAGCTCGGAAGTCTT...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGATGAACCATGTGCCTaGGATCCTTCCTCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYDEPCA*DPSSCQ
Trigger: CTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR TCA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCAAGAAGCTTTTTGGATaGCTGAACTCGCAAACAATT +
Preference number: 4 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIKKLFG*LNSQTI
Trigger: AATTGTTTGCGAGTTCAGTCATCCAAAAAGCTTCTT...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495514.5
CDS-3UTR GCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCACTTCAATCACGTGCTaGACATCTAACTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLTSITC*TSNLKS
Trigger: GGACTTCAAGTTAGATGTGCAGCACGTGATTGAAGT...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR GCA 90 bp GTCCCCCATCACTGGGCATTACTAGGCAGCTACTGTTCTGATTTGACATTTCTGATCCCTTTATCCCTTTaGCACACAGTTTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: VPHHWALLGSYCSDLTFLIPLSL*HTVSFS
Trigger: TGAAAAGGAAACTGTGTGGCAAAGGGATAAAGGGAT...CAGAAATGTCAAATCAGAACAGTAGCTGCCTAGTAATGCCCAGTGATGGGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCTCTAACTTGAAGTCCTaGAGATTGGCTAGTGTCACA +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLSNLKS*RLASVT
Trigger: TGTGACACTAGCCAATCTCCAGGACTTCAAGTTAGA...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCGTTGTTGTTACTTGCTaGGATGTACATCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLVVVTC*DVHPLE
Trigger: CTCAAGTGGATGTACATCCCAGCAAGTAACAACAAC...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCCTAAATTGTGAGAGGTaGTGTTTCAAAAGACACACG +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVLNCER*CFKRHT
Trigger: CGTGTGTCTTTTGAAACACCACCTCTCACAATTTAG...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp GTCCCCCATCACTGGGCATTACTAGGCAGCTACTGTTCTGATTTGACATTTCTGTGTGAAGTCTTCTCTTaGCATTTTCCTTGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: VPHHWALLGSYCSDLTFLCEVFS*HFPWSK
Trigger: TTTGGACCAAGGAAAATGCCAAGAGAAGACTTCACA...CAGAAATGTCAAATCAGAACAGTAGCTGCCTAGTAATGCCCAGTGATGGGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp CCTTGGTTTCCACATGTTGGTCTGAGGACCTATGTTCTTTGTCACATAATAGGAAAGCCATTTGGCCCTTaGTTTCCACATGTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PWFPHVGLRTYVLCHIIGKPFGP*FPHVGL
Trigger: CAGACCAACATGTGGAAACCAAGGGCCAAATGGCTT...TCCTATTATGTGACAAAGAACATAGGTCCTCAGACCAACATGTGGAAACCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR CCA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCATGGAAGAAGCTTTTTaGATGACTGAACTCGCAAAC +
Preference number: 4 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVMEEAF*MTELAN
Trigger: GTTTGCGAGTTCAGTCATCCAAAAAGCTTCTTCCAT...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495514.5
CDS-3UTR GCA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCATTTACAGAGATATGTTaGCACGGATTATTGATTCTG +
Preference number: 4 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPFTEIC*HGLLIL
Trigger: CAGAATCAATAATCCGTGGCAACATATCTCTGTAAA...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CATCACTGGGCATTACTAGGCAGCTACTGTTCTGATTTGACATTTCTGCAGTTAACCTTAGAAGCCATTTaGCCCTTGGTTTCCACATGT +
Preference number: 4 (lower is better)
Translates to: HHWALLGSYCSDLTFLQLTLEAI*PLVSTC
Trigger: ACATGTGGAAACCAAGGGCCAAATGGCTTCTAAGGT...TAACTGCAGAAATGTCAAATCAGAACAGTAGCTGCCTAGTAATGCCCAGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR GCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATCGCACAGTTGTAAGCTaGCATCTCCACTTCATACAA +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYRTVVS*HLHFIQ
Trigger: TTGTATGAAGTGGAGATGGCAGCTTACAACTGTGCG...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATAGATACTGCCGTCCCTaGCAACACTTTCTTCTACTT +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYRYCRP*QHFLLL
Trigger: AAGTAGAAGAAAGTGTTGCCAGGGACGGCAGTATCT...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495514.5
CDS-3UTR CCA 90 bp TATGTTCTAATATTTATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGTCTTGGCATTTTCCTTaGTCCAAACTGTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: YVLIFIIQAFGLCLPLTESWHFP*SKLSPH
Trigger: ATGAGGTGACAGTTTGGACCAAGGAAAATGCCAAGA...CTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATAAATATTAGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CCA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATATAAAAGCCATGGATTaGGGTGTTGTTGTTACTTGC +
Preference number: 4 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYIKAMD*GVVVTC
Trigger: GCAAGTAACAACAACACCCCAATCCATGGCTTTTAT...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS GCA 90 bp AGGAGCCGAGGACCGAGAAGTTGCGGGCCGGAGAGGGAGGGCGCGTaGGGGCGTGTTGTGGCTGTGGCGGGCGTGAGGGTGTGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: RSRGPRSCGPEREGA*GRVVAVAGVRVCAP
Trigger: CGGCGCGCACACCCTCACGCCCGCCACAGCCACAACACGCCCGCACGCGCCCTCCCTCTCCGGCCCGCAACTTCTCGGTCCTCGGCTCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000485230.5
ENST00000495514.5
ENST00000498710.1
ENST00000682979.1
CDS TCA 90 bp GGGAGCCACACAGCGCCGCGCCGCACGGACACACAACACGCTCGGTaGCACCGGGGACACACAACACGGGCGAGCGGCCGCGGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: GSHTAPRRTDTQHAR*HRGHTTRASGRGWS
Trigger: GCTCCAGCCGCGGCCGCTCGCCCGTGTTGTGTGTCCCCGGTGTCACCGAGCGTGTTGTGTGTCCGTGCGGCGCGGCGCTGTGTGGCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000485230.5
ENST00000495514.5
ENST00000498710.1
ENST00000682979.1
CDS TCA 90 bp TCTCGGCCATGCACTGGTAGACGCCTTCGTCCTCAGGCCCCATGCTaGGCACGCGCAGGGCCCTGCGGGAGAGCCGGAGGCGCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SRPCTGRRLRPQAPC*ARAGPCGRAGGAGW
Trigger: CCAGCCAGCGCCTCCGGCTCTCCCGCAGGGCCCTGCGCGTGCTCAGCATGGGGCCTGAGGACGAAGGCGTCTACCAGTGCATGGCCGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS GCA 90 bp GAGCGGCCGCGGCTGGAGCAACAAAGGAGCCGAGGACCGAGAAGTTaGGGGCCGGAGAGGGAGGGCGCGTGCGGGCGTGTTGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: ERPRLEQQRSRGPRS*GPEREGACGRVVAV
Trigger: CACAGCCACAACACGCCCGCACGCGCCCTCCCTCTCCGGCCCGCAACTTCTCGGTCCTCGGCTCCTTTGTTGCTCCAGCCGCGGCCGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000485230.5
ENST00000495514.5
ENST00000498710.1
ENST00000682979.1
CDS CCA 90 bp TGCGCGTCCGTCCCTGCTGCTAGCGGCTTACGGGAGAGGCGGCCGTaGTCTGGCTGGCTGCTGCTCTGGGGACTGGCTCCAGGGTCGTCT +
Preference number: 5 (lower is better)
Translates to: CASVPAASGLRERRP*SGWLLLWGLAPGSS
Trigger: AGACGACCCTGGAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACCACGGCCGCCTCTCCCGTAAGCCGCTAGCAGCAGGGACGGACGCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497495.1
CDS CCA 90 bp CGCGACCGCTGTAGCCCGACACCACGTAGGGCCGAGAGGGGGCGCTaGGCTCGCTCTCCCCCAGCATGTTCAGAGCCCGGACTCGAAACT +
Preference number: 5 (lower is better)
Translates to: RDRCSPTPRRAERGR*ARSPPACSEPGLET
Trigger: AGTTTCGAGTCCGGGCTCTGAACATGCTGGGGGAGAGCGAGCCCAGCGCCCCCTCTCGGCCCTACGTGGTGTCGGGCTACAGCGGTCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000463971.1
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 90 bp CGATGGAGCCCAGGACGACCCCGACAATCAGATAGGGCAGGTCGCTaGAGCGAGCCACCATGGCCCCAGTGCCCACCGGCCGCTCTATGG +
Preference number: 5 (lower is better)
Translates to: RWSPGRPRQSDRAGR*SEPPWPQCPPAALW
Trigger: CCATAGAGCGGCCGGTGGGCACTGGGGCCATGGTGGCTCGCTCCAGCGACCTGCCCTATCTGATTGTCGGGGTCGTCCTGGGCTCCATCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 90 bp GTCCCTGCTGCTAGCGGCTTACGGGAGAGGCGGCCGTGGTCTGGCTaGCTGCTGCTCTGGGGACTGGCTCCAGGGTCGTCTCTCTGGATC +
Preference number: 5 (lower is better)
Translates to: VPAASGLRERRPWSG*LLLWGLAPGSSLWI
Trigger: GATCCAGAGAGACGACCCTGGAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACCACGGCCGCCTCTCCCGTAAGCCGCTAGCAGCAGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497495.1
CDS GCA 90 bp CTGCTAGCGGCTTACGGGAGAGGCGGCCGTGGTCTGGCTGGCTGCTaGTCTGGGGACTGGCTCCAGGGTCGTCTCTCTGGATCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LLAAYGRGGRGLAGC*SGDWLQGRLSGSAA
Trigger: AGCAGCAGATCCAGAGAGACGACCCTGGAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACCACGGCCGCCTCTCCCGTAAGCCGCTAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497495.1
CDS GCA 90 bp CTGCTGCTAGCGGCTTACGGGAGAGGCGGCCGTGGTCTGGCTGGCTaGTGCTCTGGGGACTGGCTCCAGGGTCGTCTCTCTGGATCTGCT +
Preference number: 5 (lower is better)
Translates to: LLLAAYGRGGRGLAG*CSGDWLQGRLSGSA
Trigger: AGCAGATCCAGAGAGACGACCCTGGAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACCACGGCCGCCTCTCCCGTAAGCCGCTAGCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497495.1
CDS CCA 90 bp ACCTGCCGCCCACACCCAAGAATGCGCTACCTGCTGAAGCTCGCCTaGGCAGTGCTGCTGGGGCTTCATGCCCGGGTAGCCCACTGCAGC +
Preference number: 5 (lower is better)
Translates to: TCRPHPRMRYLLKLA*AVLLGLHARVAHCS
Trigger: GCTGCAGTGGGCTACCCGGGCATGAAGCCCCAGCAGCACTGCCCAGGCGAGCTTCAGCAGGTAGCGCATTCTTGGGTGTGGGCGGCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479182.5
CDS CCA 90 bp CATGGCAGGGAGGCAAAGGAGCAGACTCACTGGCTAGTGTCACAGTaGCTGGCACGCTGGCCACAGCCCCCGCAGGCATCCGGGCCACAC +
Preference number: 5 (lower is better)
Translates to: HGREAKEQTHWLVSQ*LARWPQPPQASGPH
Trigger: GTGTGGCCCGGATGCCTGCGGGGGCTGTGGCCAGCGTGCCAGCCACTGTGACACTAGCCAGTGAGTCTGCTCCTTTGCCTCCCTGCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS CCA 90 bp GAGGAGGGACCGCACCATGGCAGGGAGGCAAAGGAGCAGACTCACTaGCTAGTGTCACAGTGGCTGGCACGCTGGCCACAGCCCCCGCAG +
Preference number: 5 (lower is better)
Translates to: EEGPHHGREAKEQTH*LVSQWLARWPQPPQ
Trigger: CTGCGGGGGCTGTGGCCAGCGTGCCAGCCACTGTGACACTAGCCAGTGAGTCTGCTCCTTTGCCTCCCTGCCATGGTGCGGTCCCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CAA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCCCGAGGACCGAGAAGTaGCGGGCCGGAGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPPRTEK*RAGEGG
Trigger: CCCTCCCTCTCCGGCCCGCAACTTCTCGGTCCTCGG...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000495514.5
CDS TCA 90 bp CGCCCGGCCACTGCCCTCATGCCGAGGCCGCCACACCAGTTCATATaGGTCTGTCTTGGAGGTGCGGGGCGAGCTGAGGATGATGGGAGC +
Preference number: 5 (lower is better)
Translates to: RPATALMPRPPHQFI*VCLGGAGRAEDDGS
Trigger: GCTCCCATCATCCTCAGCTCGCCCCGCACCTCCAAGACAGACTCATATGAACTGGTGTGGCGGCCTCGGCATGAGGGCAGTGGCCGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000497495.1
ENST00000682979.1
CDS CCA 90 bp GCTGGCACGCTGGCCACAGCCCCCGCAGGCATCCGGGCCACACACTaGTACCGTCCCACAGTGTGGTTGTTAAGGGCAGTGATGACGAGG +
Preference number: 5 (lower is better)
Translates to: AGTLATAPAGIRATH*YRPTVWLLRAVMTR
Trigger: CCTCGTCATCACTGCCCTTAACAACCACACTGTGGGACGGTACCAGTGTGTGGCCCGGATGCCTGCGGGGGCTGTGGCCAGCGTGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000471963.6
ENST00000484034.1
ENST00000485230.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 90 bp CCACGGCCTGGAGCATGGGGCCGGGGCGCTGGTGTCAACCTTCGGTaGAAGTTTGGGAGGCTGGCTGGATCCTTCTTCCACCCGAGAAGC +
Preference number: 5 (lower is better)
Translates to: PRPGAWGRGAGVNLR*KFGRLAGSFFHPRS
Trigger: GCTTCTCGGGTGGAAGAAGGATCCAGCCAGCCTCCCAAACTTCCACCGAAGGTTGACACCAGCGCCCCGGCCCCATGCTCCAGGCCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462425.1
CDS CCA 90 bp GCAAAGGAGCAGACTCACTGGCTAGTGTCACAGTGGCTGGCACGCTaGCCACAGCCCCCGCAGGCATCCGGGCCACACACTGGTACCGTC +
Preference number: 5 (lower is better)
Translates to: AKEQTHWLVSQWLAR*PQPPQASGPHTGTV
Trigger: GACGGTACCAGTGTGTGGCCCGGATGCCTGCGGGGGCTGTGGCCAGCGTGCCAGCCACTGTGACACTAGCCAGTGAGTCTGCTCCTTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS CCA 90 bp TACGGGAGAGGCGGCCGTGGTCTGGCTGGCTGCTGCTCTGGGGACTaGCTCCAGGGTCGTCTCTCTGGATCTGCTGCTCTTTGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: YGRGGRGLAGCCSGD*LQGRLSGSAALCWP
Trigger: TGGCCAGCAAAGAGCAGCAGATCCAGAGAGACGACCCTGGAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACCACGGCCGCCTCTCCCGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497495.1
CDS CCA 90 bp AGCGGCTTACGGGAGAGGCGGCCGTGGTCTGGCTGGCTGCTGCTCTaGGGACTGGCTCCAGGGTCGTCTCTCTGGATCTGCTGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: SGLRERRPWSGWLLL*GLAPGSSLWICCSL
Trigger: CAAAGAGCAGCAGATCCAGAGAGACGACCCTGGAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACCACGGCCGCCTCTCCCGTAAGCCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497495.1
CDS-3UTR CAA 90 bp GGAGAGCTGCATTCCAGGTTCCTGTCCTACGTAGGCCCCTACGGGGTGCTGGGGAGGCTGCTCCTGGCGTaGGCAGCAGTCGTGATGGGG +
Preference number: 5 (lower is better)
Translates to: GELHSRFLSYVGPYGVLGRLLLA*AAVVMG
Trigger: CCCCATCACGACTGCTGCCAACGCCAGGAGCAGCCT...CCCCAGCACCCCGTAGGGGCCTACGTAGGACAGGAACCTGGAATGCAGCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR CAA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTAGGCTGCTCCTGGCGTaGGCAGCAGTCGTGATGGGG +
Preference number: 5 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLRLLLA*AAVVMG
Trigger: CCCCATCACGACTGCTGCCAACGCCAGGAGCAGCCT...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS GCA 90 bp TGTGTCTTTTCTGTGTGTGTTTGTGTGTCTCTGTGTGTGTGTCTGTaGGCGCGCGCGGCGGCTGACACCGGCGGGCCGGGGCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: CVFSVCVCVSLCVCL*ARAAADTGGPGLRV
Trigger: GACCCTGAGCCCCGGCCCGCCGGTGTCAGCCGCCGCGCGCGCGCACAGACACACACACAGAGACACACAAACACACACAGAAAAGACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000485230.5
ENST00000495514.5
ENST00000498710.1
ENST00000682979.1
CDS CCA 90 bp GCCCCCGCAGGCATCCGGGCCACACACTGGTACCGTCCCACAGTGTaGTTGTTAAGGGCAGTGATGACGAGGGTCCCGTGGGTGATGAGG +
Preference number: 5 (lower is better)
Translates to: APAGIRATHWYRPTV*LLRAVMTRVPWVMR
Trigger: CCTCATCACCCACGGGACCCTCGTCATCACTGCCCTTAACAACCACACTGTGGGACGGTACCAGTGTGTGGCCCGGATGCCTGCGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000471963.6
ENST00000484034.1
ENST00000485230.5
ENST00000495514.5
ENST00000682979.1
CDS-3UTR CAA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCGCCATGATCTCGGGTTaGGGCCGCCGTCCAGTTCGG +
Preference number: 5 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPAMISG*GRRPVR
Trigger: CCGAACTGGACGGCGGCCCAAACCCGAGATCATGGC...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS TCA 90 bp AAAGCTATGGCCATCAGTGCTGAGCTTTGCCCTGGTGGCCCCTCCTaGGAGCCGTGCTGTTGCCAAGCCTGGTGCCTGCCTGCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: KAMAISAELCPGGPS*EPCCCQAWCLPAAG
Trigger: CCCAGCAGCAGGCAGGCACCAGGCTTGGCAACAGCACGGCTCTCAGGAGGGGCCACCAGGGCAAAGCTCAGCACTGATGGCCATAGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS GCA 90 bp TGGCTGCTGCTCTGGGGACTGGCTCCAGGGTCGTCTCTCTGGATCTaGTGCTCTTTGCTGGCCATGATCTCGGGTTTGGGCCGCCGTCCA +
Preference number: 5 (lower is better)
Translates to: WLLLWGLAPGSSLWI*CSLLAMISGLGRRP
Trigger: TGGACGGCGGCCCAAACCCGAGATCATGGCCAGCAAAGAGCAGCAGATCCAGAGAGACGACCCTGGAGCCAGTCCCCAGAGCAGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000497495.1
ENST00000682979.1
CDS GCA 90 bp TGCATTGAGAGCATGTGGGCCTCCCGGAAGCTCACCAGAGGGTGGTaGAGGGCACACCTCATCAGTGCAGAGAGTGCAGGCCCAGGGACC +
Preference number: 5 (lower is better)
Translates to: CIESMWASRKLTRGW*RAHLISAESAGPGT
Trigger: GGTCCCTGGGCCTGCACTCTCTGCACTGATGAGGTGTGCCCTGCACCACCCTCTGGTGAGCTTCCGGGAGGCCCACATGCTCTCAATGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466059.5
ENST00000471963.6
ENST00000479182.5
CDS CCA 90 bp GAGGTAGGGCTGTCCACTGGCCTGGTGGCCTGGGAGTCCTCCCAATaGCACCATAGTATACGGGCAGGAGGGTGGAAGGGCACTTCGAGG +
Preference number: 5 (lower is better)
Translates to: EVGLSTGLVAWESSQ*HHSIRAGGWKGTSR
Trigger: CCTCGAAGTGCCCTTCCACCCTCCTGCCCGTATACTATGGTGCCATTGGGAGGACTCCCAGGCCACCAGGCCAGTGGACAGCCCTACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 90 bp CTGTGCATTGAGAGCATGTGGGCCTCCCGGAAGCTCACCAGAGGGTaGTGCAGGGCACACCTCATCAGTGCAGAGAGTGCAGGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: LCIESMWASRKLTRG*CRAHLISAESAGPG
Trigger: CCCTGGGCCTGCACTCTCTGCACTGATGAGGTGTGCCCTGCACCACCCTCTGGTGAGCTTCCGGGAGGCCCACATGCTCTCAATGCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466059.5
ENST00000471963.6
ENST00000479182.5
CDS CCA 90 bp CCGGGGCGCTGGTGTCAACCTTCGGTGGAAGTTTGGGAGGCTGGCTaGATCCTTCTTCCACCCGAGAAGCTTCTGGGAACCGCTGAGGCG +
Preference number: 5 (lower is better)
Translates to: PGRWCQPSVEVWEAG*ILLPPEKLLGTAEA
Trigger: CGCCTCAGCGGTTCCCAGAAGCTTCTCGGGTGGAAGAAGGATCCAGCCAGCCTCCCAAACTTCCACCGAAGGTTGACACCAGCGCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462425.1
CDS CCA 90 bp GGCCTGTCGGGAGCTTCTGGGGAGAAGCAAGACCCCATTCAGCCATaGGAACAGGCCTCTGAGGCAGTTCCAGTCCTGACTGCGCGTCCG +
Preference number: 5 (lower is better)
Translates to: GLSGASGEKQDPIQP*EQASEAVPVLTARP
Trigger: CGGACGCGCAGTCAGGACTGGAACTGCCTCAGAGGCCTGTTCCCATGGCTGAATGGGGTCTTGCTTCTCCCCAGAAGCTCCCGACAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497495.1
CDS CCA 90 bp TCCCACGGGGAATCCAGGTCACGTACACTGAGGTCTCGGAGGCCGTaGAGATGGTGGGCCTGTCGGGAGCTTCTGGGGAGAAGCAAGACC +
Preference number: 5 (lower is better)
Translates to: SHGESRSRTLRSRRP*RWWACRELLGRSKT
Trigger: GGTCTTGCTTCTCCCCAGAAGCTCCCGACAGGCCCACCATCTCCACGGCCTCCGAGACCTCAGTGTACGTGACCTGGATTCCCCGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497495.1
CDS-3UTR CAA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTGTGTCGATGAGGAGGTaGCTCAGCAGGAAGCGCGTC +
Preference number: 5 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLVSMRR*LSRKRV
Trigger: GACGCGCTTCCTGCTGAGCAACCTCCTCATCGACAC...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS GCA 90 bp GACCTCAGGGGGTTCAAACACCTGGACATTGTAGAGGATGACCGCTaGCCCGGGCTGCCCAACCCCATTGTCGGCCATGCAGCGGTAGGT +
Preference number: 5 (lower is better)
Translates to: DLRGFKHLDIVEDDR*PGLPNPIVGHAAVG
Trigger: ACCTACCGCTGCATGGCCGACAATGGGGTTGGGCAGCCCGGGGCAGCGGTCATCCTCTACAATGTCCAGGTGTTTGAACCCCCTGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS GCA 90 bp CTGCTGCTCTGGGGACTGGCTCCAGGGTCGTCTCTCTGGATCTGCTaGTCTTTGCTGGCCATGATCTCGGGTTTGGGCCGCCGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: LLLWGLAPGSSLWIC*SLLAMISGLGRRPV
Trigger: AACTGGACGGCGGCCCAAACCCGAGATCATGGCCAGCAAAGAGCAGCAGATCCAGAGAGACGACCCTGGAGCCAGTCCCCAGAGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000497495.1
ENST00000682979.1
CDS CCA 90 bp CCTCTGGAGGCCTCCAGCCACTCTTGTTTGACGCTGTACCGGACCTaGGCTTTGGGGTGGCTCTCAGGCAGGTGGCAGGCAATGACTGCT +
Preference number: 5 (lower is better)
Translates to: PLEASSHSCLTLYRT*ALGWLSGRWQAMTA
Trigger: AGCAGTCATTGCCTGCCACCTGCCTGAGAGCCACCCCAAAGCCCAGGTCCGGTACAGCGTCAAACAAGAGTGGCTGGAGGCCTCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000471963.6
ENST00000477178.1
ENST00000495514.5
ENST00000682979.1
CDS CCA 90 bp CAGAATGAGACTCTGGCCTTTGGTGACGATGATGGTTTGGGCCTCTaGGGGGTAGATGATGCGGGCAGCCTCAGCGGTGGAGCGGCGCAC +
Preference number: 5 (lower is better)
Translates to: QNETLAFGDDDGLGL*GVDDAGSLSGGAAH
Trigger: GTGCGCCGCTCCACCGCTGAGGCTGCCCGCATCATCTACCCCCCAGAGGCCCAAACCATCATCGTCACCAAAGGCCAGAGTCTCATTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
ENST00000682979.1
CDS CCA 90 bp GCCGGTGACACTGGACCCATCCTTGGCCCAGGTGACCCGTGGGGGTaGGATTCCACTGGCCACACACTCCAGAATGAGACTCTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: AGDTGPILGPGDPWG*DSTGHTLQNETLAF
Trigger: AAAGGCCAGAGTCTCATTCTGGAGTGTGTGGCCAGTGGAATCCCACCCCCACGGGTCACCTGGGCCAAGGATGGGTCCAGTGTCACCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 90 bp TCCACTGATGCCACTGAGGTAGGGCTGTCCACTGGCCTGGTGGCCTaGGAGTCCTCCCAATGGCACCATAGTATACGGGCAGGAGGGTGG +
Preference number: 5 (lower is better)
Translates to: STDATEVGLSTGLVA*ESSQWHHSIRAGGW
Trigger: CCACCCTCCTGCCCGTATACTATGGTGCCATTGGGAGGACTCCCAGGCCACCAGGCCAGTGGACAGCCCTACCTCAGTGGCATCAGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS-3UTR CAA 90 bp CAGCCACAGGATGACCAAGTAGGAAGGCACGGCACGGCCCTGCTCTGGGGCCCACGTCCCACAGTGTGGTaGTTAAGGGCAGTGATGACG +
Preference number: 5 (lower is better)
Translates to: QPQDDQVGRHGTALLWGPRPTVW*LRAVMT
Trigger: CGTCATCACTGCCCTTAACAACCACACTGTGGGACG...TGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCCTACTTGGTCATCCTGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CAA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCGGCCTCCAGCCACTCTaGTTTGACGCTGTACCGGAC +
Preference number: 5 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPGLQPL*FDAVPD
Trigger: GTCCGGTACAGCGTCAAACAAGAGTGGCTGGAGGCC...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTGGGGAGCGCCGGTaGCCCCCTCAGCATCTGCTC +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSSGERR*PPQHLL
Trigger: GAGCAGATGCTGAGGGGGCAACCGGCGCTCCCCAGA...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCGTGGTGGGGCCAGAGTaGGGGGTGGCAGTCGACCAG +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSVVGPE*GVAVDQ
Trigger: CTGGTCGACTGCCACCCCCAACTCTGGCCCCACCAC...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS TCA 90 bp AGTCAGCAAAGCAGCCTGCTGTGGCTAGGAGGAGGCAAGCCAGTGTaGCCTCAGGCCTCATTCCTCTCCACGCCGTCATCGTCCCACGCA +
Preference number: 5 (lower is better)
Translates to: SQQSSLLWLGGGKPV*PQASFLSTPSSSHA
Trigger: TGCGTGGGACGATGACGGCGTGGAGAGGAATGAGGCCTGAGGTCACACTGGCTTGCCTCCTCCTAGCCACAGCAGGCTGCTTTGCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000464546.5
ENST00000471963.6
ENST00000484034.1
ENST00000485230.5
ENST00000494687.5
ENST00000495514.5
ENST00000682979.1
CDS TCA 90 bp TTCTGGGGAGAAGCAAGACCCCATTCAGCCATGGGAACAGGCCTCTaGGGCAGTTCCAGTCCTGACTGCGCGTCCGTCCCTGCTGCTAGC +
Preference number: 5 (lower is better)
Translates to: FWGEARPHSAMGTGL*GSSSPDCASVPAAS
Trigger: GCTAGCAGCAGGGACGGACGCGCAGTCAGGACTGGAACTGCCTCAGAGGCCTGTTCCCATGGCTGAATGGGGTCTTGCTTCTCCCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497495.1
CDS CCA 90 bp GTTGTAGCCGGTGACACTGGACCCATCCTTGGCCCAGGTGACCCGTaGGGGTGGGATTCCACTGGCCACACACTCCAGAATGAGACTCTG +
Preference number: 5 (lower is better)
Translates to: VVAGDTGPILGPGDP*GWDSTGHTLQNETL
Trigger: CAGAGTCTCATTCTGGAGTGTGTGGCCAGTGGAATCCCACCCCCACGGGTCACCTGGGCCAAGGATGGGTCCAGTGTCACCGGCTACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 90 bp GGGCCACCCAGGTATGAGCTGCTTATTAGCAAGTGCCAGATGGAGTaGGAGAAACCCTTGGCCCTGGTGGGACAGGCAGGCCTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: GPPRYELLISKCQME*EKPLALVGQAGLSQ
Trigger: CTGGGAGAGGCCTGCCTGTCCCACCAGGGCCAAGGGTTTCTCCCACTCCATCTGGCACTTGCTAATAAGCAGCTCATACCTGGGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS CCA 90 bp CAGAATGAGACTCTGGCCTTTGGTGACGATGATGGTTTGGGCCTCTaGGGGGTAGATGATGCGGGCAGCCTCAGCGGTGGAGCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: QNETLAFGDDDGLGL*GVDDAGSLSGGAWR
Trigger: CCTCCAGGCTCCACCGCTGAGGCTGCCCGCATCATCTACCCCCCAGAGGCCCAAACCATCATCGTCACCAAAGGCCAGAGTCTCATTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466059.5
ENST00000479182.5
CDS-3UTR CAA 90 bp GCACGGCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAAGTTCCGTCCCACAGTGTGGTaGTTAAGGGCAGTGATGACG +
Preference number: 5 (lower is better)
Translates to: ARHGPALGPTEQFCHVKFRPTVW*LRAVMT
Trigger: CGTCATCACTGCCCTTAACAACCACACTGTGGGACG...GAACTTGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CAA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATATACCGGACCTGGGCTTaGGGGTGGCTCTCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIYRTWA*GWLSGR
Trigger: CCTGCCTGAGAGCCACCCCAAAGCCCAGGTCCGGTA...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTACCGGACCTGGGCTTaGGGGTGGCTCTCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSYRTWA*GWLSGR
Trigger: CCTGCCTGAGAGCCACCCCAAAGCCCAGGTCCGGTA...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGGTCAGGCGGTGCTGGTaGGCTGGAATGCCAGAGATG +
Preference number: 5 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLVRRCW*AGMPEM
Trigger: CATCTCTGGCATTCCAGCCAACCAGCACCGCCTGAC...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGAGGCTGCTCCTGGCGTaGGCAGCAGTCGTGATGGGG +
Preference number: 5 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWRLLLA*AAVVMG
Trigger: CCCCATCACGACTGCTGCCAACGCCAGGAGCAGCCT...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS GCA 90 bp GATGGTGGTCTCATTGACCGCATCCGTGAAGGTGATATAAGGACCTaGCACGGGCCTCTCGTACACGCGACCGCTGTAGCCCGACACCAC +
Preference number: 5 (lower is better)
Translates to: DGGLIDRIREGDIRT*HGPLVHATAVARHH
Trigger: GTGGTGTCGGGCTACAGCGGTCGCGTGTACGAGAGGCCCGTGGCAGGTCCTTATATCACCTTCACGGATGCGGTCAATGAGACCACCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000463971.1
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS GCA 90 bp CCACATCAGGGGCCTGTTAGGCTCTGTCTGCTCCTGGTCCACAGGTaGCCTGGGATGGTGCCTCACGGGTGTTCAGATTCTGTAGCTAGG +
Preference number: 5 (lower is better)
Translates to: PHQGPVRLCLLLVHR*PGMVPHGCSDSVAR
Trigger: CCTAGCTACAGAATCTGAACACCCGTGAGGCACCATCCCAGGGCACCTGTGGACCAGGAGCAGACAGAGCCTAACAGGCCCCTGATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS CCA 90 bp GGAATTTGTGACCTGCTTGCGGTGTTTCACCACATAGTAGAGGATTaGCGCCCGGCCACTGCCCTCATGCCGAGGCCGCCACACCAGTTC +
Preference number: 5 (lower is better)
Translates to: GICDLLAVFHHIVED*RPATALMPRPPHQF
Trigger: GAACTGGTGTGGCGGCCTCGGCATGAGGGCAGTGGCCGGGCGCCAATCCTCTACTATGTGGTGAAACACCGCAAGCAGGTCACAAATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000479182.5
ENST00000682979.1
CDS CCA 90 bp CTGCTGGGCCACCCAGGTATGAGCTGCTTATTAGCAAGTGCCAGATaGAGTGGGAGAAACCCTTGGCCCTGGTGGGACAGGCAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: LLGHPGMSCLLASAR*SGRNPWPWWDRQAS
Trigger: AGAGGCCTGCCTGTCCCACCAGGGCCAAGGGTTTCTCCCACTCCATCTGGCACTTGCTAATAAGCAGCTCATACCTGGGTGGCCCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS CCA 90 bp GCGCACAGAAAGGTAGCTGCTGTTTTCCTGTGCATTGAGAGCATGTaGGCCTCCCGGAAGCTCACCAGAGGGTGGTGCAGGGCACACCTC +
Preference number: 5 (lower is better)
Translates to: AHRKVAAVFLCIESM*ASRKLTRGWCRAHL
Trigger: GAGGTGTGCCCTGCACCACCCTCTGGTGAGCTTCCGGGAGGCCCACATGCTCTCAATGCACAGGAAAACAGCAGCTACCTTTCTGTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466059.5
ENST00000471963.6
ENST00000479182.5
CDS-3UTR CAA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGACCTCACAGGTAAGCTaGGCACTCTGGCCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWTSQVS*ALWPQG
Trigger: CCCCTGGGGCCAGAGTGCCAAGCTTACCTGTGAGGT...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAGCCTTGGGGTTATGCTaGGCCTGGAGGTCCGCAGCT +
Preference number: 5 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIALGLC*AWRSAA
Trigger: AGCTGCGGACCTCCAGGCCAAGCATAACCCCAAGGC...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGCCACATAGTAGAGGATaGGCGCCCGGCCACTGCCCT +
Preference number: 5 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWPHSRG*APGHCP
Trigger: AGGGCAGTGGCCGGGCGCCAATCCTCTACTATGTGG...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCCCACATAGTAGAGGATaGGCGCCCGGCCACTGCCCT +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSPHSRG*APGHCP
Trigger: AGGGCAGTGGCCGGGCGCCAATCCTCTACTATGTGG...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTATGATGGTGGTCTCATaGACCGCATCCGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLMMVVS*TASVKV
Trigger: CACCTTCACGGATGCGGTCAATGAGACCACCATCAT...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp AAAGACACACGCACCAGTGGCCCCGGGGAGAGCTGCATTCCAGGTTCCTGTCCTGTCTCCTCCACTCACTaGGCAGGAGTCAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: KDTRTSGPGESCIPGSCPVSSTH*AGVRTV
Trigger: GACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGAC...AGGACAGGAACCTGGAATGCAGCTCTCCCCGGGGCCACTGGTGCGTGTGTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR CAA 90 bp GGAAGGCACGGCACGGCCCTGCTCTGGGGCCCACGGAACAGTTCTGCCATGTCAGACCTTAGAAGCCATTaGGCCCTTGGTTTCCACATG +
Preference number: 5 (lower is better)
Translates to: GRHGTALLWGPRNSSAMSDLRSH*ALGFHM
Trigger: CATGTGGAAACCAAGGGCCAAATGGCTTCTAAGGTC...TGACATGGCAGAACTGTTCCGTGGGCCCCAGAGCAGGGCCGTGCCGTGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS TCA 90 bp AAGCTGCCATCTCCACTTCATACAAGCTCCCGGGGTCAAGTCTGGTaGGGGTCAGGCGGTGCTGGTTGGCTGGAATGCCAGAGATGGTCC +
Preference number: 5 (lower is better)
Translates to: KLPSPLHTSSRGQVW*GSGGAGWLECQRWS
Trigger: GGACCATCTCTGGCATTCCAGCCAACCAGCACCGCCTGACCCTCACCAGACTTGACCCCGGGAGCTTGTATGAAGTGGAGATGGCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000497495.1
ENST00000682979.1
CDS TCA 90 bp GCAAGTTCTCAAAGGCCTCACAAGAACACCCGCCACTGTCAGAGCTaGGCTGCAGGGGAGATGGCTCTGGATGCTCTTCTGGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: ASSQRPHKNTRHCQS*AAGEMALDALLEGG
Trigger: GCCTCCCTCCAGAAGAGCATCCAGAGCCATCTCCCCTGCAGCTCAGCTCTGACAGTGGCGGGTGTTCTTGTGAGGCCTTTGAGAACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463971.1
CDS GCA 90 bp GCTTGCGGTGTTTCACCACATAGTAGAGGATTGGCGCCCGGCCACTaGCCTCATGCCGAGGCCGCCACACCAGTTCATATGAGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: ACGVSPHSRGLAPGH*PHAEAATPVHMSLS
Trigger: AGACAGACTCATATGAACTGGTGTGGCGGCCTCGGCATGAGGGCAGTGGCCGGGCGCCAATCCTCTACTATGTGGTGAAACACCGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000479182.5
ENST00000682979.1
CDS GCA 90 bp CCTTGCGGTGTTTCACCACATAGTAGAGGATTGGCGCCCGGCCACTaGCCTCATGCCGAGGCCGCCACACCAGTTCATATGAGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: PCGVSPHSRGLAPGH*PHAEAATPVHMSLS
Trigger: AGACAGACTCATATGAACTGGTGTGGCGGCCTCGGCATGAGGGCAGTGGCCGGGCGCCAATCCTCTACTATGTGGTGAAACACCGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355385.7
ENST00000466059.5
ENST00000495514.5
ENST00000497495.1
CDS GCA 90 bp AATCCCTGGCTGAGAACCCCTGGCTGTCCCCCTGGCCAAAGCCAGTaGACACAGAACTGGAGCTTGGATGTGGCACCTCCAGGTATCTAC +
Preference number: 5 (lower is better)
Translates to: NPWLRTPGCPPGQSQ*TQNWSLDVAPPGIY
Trigger: GTAGATACCTGGAGGTGCCACATCCAAGCTCCAGTTCTGTGTGCACTGGCTTTGGCCAGGGGGACAGCCAGGGGTTCTCAGCCAGGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466059.5
ENST00000471963.6
ENST00000479182.5
CDS GCA 90 bp CAGGGATCCAGGCAAGCGCACAGAAAGGTAGCTGCTGTTTTCCTGTaGATTGAGAGCATGTGGGCCTCCCGGAAGCTCACCAGAGGGTGG +
Preference number: 5 (lower is better)
Translates to: QGSRQAHRKVAAVFL*IESMWASRKLTRGW
Trigger: CCACCCTCTGGTGAGCTTCCGGGAGGCCCACATGCTCTCAATGCACAGGAAAACAGCAGCTACCTTTCTGTGCGCTTGCCTGGATCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466059.5
ENST00000471963.6
ENST00000479182.5
CDS GCA 90 bp CCATTGCCAAGATGGGTCTGCCTCAGCAGGCTGCTGGTGTCACTCTaGTGCTCAAAAGGAAGAGTAATGAGACGGCCACGCCGGGGAGTC +
Preference number: 5 (lower is better)
Translates to: PLPRWVCLSRLLVSL*CSKGRVMRRPRRGV
Trigger: GACTCCCCGGCGTGGCCGTCTCATTACTCTTCCTTTTGAGCAGCAGAGTGACACCAGCAGCCTGCTGAGGCAGACCCATCTTGGCAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479182.5
CDS CCA 90 bp CGTCCCACAGTGTGGTTGTTAAGGGCAGTGATGACGAGGGTCCCGTaGGTGATGAGGACACCCAGAGCATCATCCGAGCCATTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RPTVWLLRAVMTRVP*VMRTPRASSEPFSS
Trigger: GGAGCTGAATGGCTCGGATGATGCTCTGGGTGTCCTCATCACCCACGGGACCCTCGTCATCACTGCCCTTAACAACCACACTGTGGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000471963.6
ENST00000484034.1
ENST00000485230.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 90 bp TCCAGCCACTCTTGTTTGACGCTGTACCGGACCTGGGCTTTGGGGTaGCTCTCAGGCAGGTGGCAGGCAATGACTGCTGTGTTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: SSHSCLTLYRTWALG*LSGRWQAMTAVFPS
Trigger: TGAGGGAAACACAGCAGTCATTGCCTGCCACCTGCCTGAGAGCCACCCCAAAGCCCAGGTCCGGTACAGCGTCAAACAAGAGTGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000471963.6
ENST00000477178.1
ENST00000495514.5
ENST00000682979.1
CDS CCA 90 bp GCTCCCGGGGTCAAGTCTGGTGAGGGTCAGGCGGTGCTGGTTGGCTaGAATGCCAGAGATGGTCCAATCGTCAGAGGAATTTGTGACCTG +
Preference number: 5 (lower is better)
Translates to: APGVKSGEGQAVLVG*NARDGPIVRGICDL
Trigger: CAGGTCACAAATTCCTCTGACGATTGGACCATCTCTGGCATTCCAGCCAACCAGCACCGCCTGACCCTCACCAGACTTGACCCCGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000479182.5
ENST00000682979.1
CDS CCA 90 bp AGAGGAATTTGTGACCTTGCGGTGTTTCACCACATAGTAGAGGATTaGCGCCCGGCCACTGCCCTCATGCCGAGGCCGCCACACCAGTTC +
Preference number: 5 (lower is better)
Translates to: RGICDLAVFHHIVED*RPATALMPRPPHQF
Trigger: GAACTGGTGTGGCGGCCTCGGCATGAGGGCAGTGGCCGGGCGCCAATCCTCTACTATGTGGTGAAACACCGCAAGGTCACAAATTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355385.7
ENST00000466059.5
ENST00000495514.5
ENST00000497495.1
CDS CCA 90 bp TTATTAGCAAGTGCCAGATGGAGTGGGAGAAACCCTTGGCCCTGGTaGGACAGGCAGGCCTCTCCCAGAGGCTGCTGCCAACCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: LLASARWSGRNPWPW*DRQASPRGCCQPSA
Trigger: AGCAGAAGGTTGGCAGCAGCCTCTGGGAGAGGCCTGCCTGTCCCACCAGGGCCAAGGGTTTCTCCCACTCCATCTGGCACTTGCTAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS CCA 90 bp TGCTTATTAGCAAGTGCCAGATGGAGTGGGAGAAACCCTTGGCCCTaGTGGGACAGGCAGGCCTCTCCCAGAGGCTGCTGCCAACCTTCT +
Preference number: 5 (lower is better)
Translates to: CLLASARWSGRNPWP*WDRQASPRGCCQPS
Trigger: AGAAGGTTGGCAGCAGCCTCTGGGAGAGGCCTGCCTGTCCCACCAGGGCCAAGGGTTTCTCCCACTCCATCTGGCACTTGCTAATAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS CCA 90 bp ATGAGCTGCTTATTAGCAAGTGCCAGATGGAGTGGGAGAAACCCTTaGCCCTGGTGGGACAGGCAGGCCTCTCCCAGAGGCTGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: MSCLLASARWSGRNP*PWWDRQASPRGCCQ
Trigger: TTGGCAGCAGCCTCTGGGAGAGGCCTGCCTGTCCCACCAGGGCCAAGGGTTTCTCCCACTCCATCTGGCACTTGCTAATAAGCAGCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS CCA 90 bp GCTAGGAGGCAGAGTCACAGCTCCTGGACACCCCAGCAACTCGGGTaGCATTTGGCTTCCTGGCAGGTAAAGCTATGGCCATCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: ARRQSHSSWTPQQLG*HLASWQVKLWPSVL
Trigger: CAGCACTGATGGCCATAGCTTTACCTGCCAGGAAGCCAAATGCCACCCGAGTTGCTGGGGTGTCCAGGAGCTGTGACTCTGCCTCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCGGCCTCCAGCCACTCTaGTTTGACGCTGTACCGGAC +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSGLQPL*FDAVPD
Trigger: GTCCGGTACAGCGTCAAACAAGAGTGGCTGGAGGCC...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCATGATGGTGGTCTCATaGACCGCATCCGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPMMVVS*TASVKV
Trigger: CACCTTCACGGATGCGGTCAATGAGACCACCATCAT...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCATGGAGTGCCAGTACTaGTCCCCTTCCACCATATCC +
Preference number: 5 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPMECQY*SPSTIS
Trigger: GGATATGGTGGAAGGGGACAAGTACTGGCACTCCAT...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTCACAGATCATCACGTaGCTGAACTCGCTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPSQIIT*LNSLSP
Trigger: AGGGGAGAGCGAGTTCAGCAACGTGATGATCTGTGA...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS GCA 90 bp GAAGGTGACCATGGCTGTCTGGCCCTCTCCCGCACAGTTGTAAGCTaGCATCTCCACTTCATACAAGCTCCCGGGGTCAAGTCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: EGDHGCLALSRTVVS*HLHFIQAPGVKSGE
Trigger: CTCACCAGACTTGACCCCGGGAGCTTGTATGAAGTGGAGATGGCAGCTTACAACTGTGCGGGAGAGGGCCAGACAGCCATGGTCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000497495.1
ENST00000682979.1
CDS GCA 90 bp AGGGCAAGGACAGAAGGCGTGTGGACCAGGATGTCCTGTAGAGCATaGCCAGGAGGCAGTCCCAGAGAGCATGGAGATGGGATCAAACAG +
Preference number: 5 (lower is better)
Translates to: RARTEGVWTRMSCRA*PGGSPREHGDGIKQ
Trigger: CTGTTTGATCCCATCTCCATGCTCTCTGGGACTGCCTCCTGGGCATGCTCTACAGGACATCCTGGTCCACACGCCTTCTGTCCTTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466059.5
ENST00000479182.5
CDS CCA 90 bp TTGACGCTGTACCGGACCTGGGCTTTGGGGTGGCTCTCAGGCAGGTaGCAGGCAATGACTGCTGTGTTTCCCTCATCCACTTCAATCACG +
Preference number: 5 (lower is better)
Translates to: LTLYRTWALGWLSGR*QAMTAVFPSSTSIT
Trigger: CGTGATTGAAGTGGATGAGGGAAACACAGCAGTCATTGCCTGCCACCTGCCTGAGAGCCACCCCAAAGCCCAGGTCCGGTACAGCGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000471963.6
ENST00000477178.1
ENST00000495514.5
ENST00000498710.1
ENST00000682979.1
CDS CCA 90 bp GCTCCCGGGGTCAAGTCTGGTGAGGGTCAGGCGGTGCTGGTTGGCTaGAATGCCAGAGATGGTCCAATCGTCAGAGGAATTTGTGACCTT +
Preference number: 5 (lower is better)
Translates to: APGVKSGEGQAVLVG*NARDGPIVRGICDL
Trigger: AAGGTCACAAATTCCTCTGACGATTGGACCATCTCTGGCATTCCAGCCAACCAGCACCGCCTGACCCTCACCAGACTTGACCCCGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355385.7
ENST00000466059.5
ENST00000495514.5
ENST00000497495.1
CDS CCA 90 bp CACGGGTGTTCAGATTCTGTAGCTAGGAGGCAGAGTCACAGCTCCTaGACACCCCAGCAACTCGGGTGGCATTTGGCTTCCTGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: HGCSDSVARRQSHSS*TPQQLGWHLASWQV
Trigger: TACCTGCCAGGAAGCCAAATGCCACCCGAGTTGCTGGGGTGTCCAGGAGCTGTGACTCTGCCTCCTAGCTACAGAATCTGAACACCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS CCA 90 bp CTCACAAGAACACCCGCCACTGTCAGAGCTGAGCTGCAGGGGAGATaGCTCTGGATGCTCTTCTGGAGGGAGGCAGAAGGCTTTAGGACT +
Preference number: 5 (lower is better)
Translates to: LTRTPATVRAELQGR*LWMLFWREAEGFRT
Trigger: AGTCCTAAAGCCTTCTGCCTCCCTCCAGAAGAGCATCCAGAGCCATCTCCCCTGCAGCTCAGCTCTGACAGTGGCGGGTGTTCTTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463971.1
CDS-3UTR CAA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGTCCAGCCACTCTTGTTaGACGCTGTACCGGACCTGG +
Preference number: 5 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWSSHSC*TLYRTW
Trigger: CCAGGTCCGGTACAGCGTCAAACAAGAGTGGCTGGA...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCACCTCACAGGTAAGCTaGGCACTCTGGCCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: PHARDEPCAWDPSSCQLITSQVS*ALWPQG
Trigger: CCCCTGGGGCCAGAGTGCCAAGCTTACCTGTGAGGT...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCCATCCTGCCATAGCCTaGGGGTTATGCTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSHPAIA*GLCLAW
Trigger: CCAGGCCAAGCATAACCCCAAGGCTATGGCAGGATG...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCATCTGGGGAGCGCCGGTaGCCCCCTCAGCATCTGCTC +
Preference number: 5 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPSGERR*PPQHLL
Trigger: GAGCAGATGCTGAGGGGGCAACCGGCGCTCCCCAGA...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCCCACATAGTAGAGGATaGGCGCCCGGCCACTGCCCT +
Preference number: 5 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIPHSRG*APGHCP
Trigger: AGGGCAGTGGCCGGGCGCCAATCCTCTACTATGTGG...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCCACGGAAGGACTGGATaGGGAACCCACCATTCCCAC +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSHGRTG*GTHHSH
Trigger: GTGGGAATGGTGGGTTCCCAATCCAGTCCTTCCGTG...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCGGGATGTACATCCACTaGAGCATGATGGTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPGMYIH*SMMVVS
Trigger: TGAGACCACCATCATGCTCAAGTGGATGTACATCCC...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTGGGTGTTGTTGTTACTaGCTGGGATGTACATCCACT +
Preference number: 5 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLGCCCY*LGCTST
Trigger: AGTGGATGTACATCCCAGCAAGTAACAACAACACCC...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTTGGATTGGGGTGTTGTaGTTACTTGCTGGGATGTAC +
Preference number: 5 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLWIGVL*LLAGMY
Trigger: GTACATCCCAGCAAGTAACAACAACACCCCAATCCA...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAGTGGTGGGGCCAGAGTaGGGGGTGGCAGTCGACCAG +
Preference number: 5 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPVVGPE*GVAVDQ
Trigger: CTGGTCGACTGCCACCCCCAACTCTGGCCCCACCAC...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTGTGGTGGGGCCAGAGTaGGGGGTGGCAGTCGACCAG +
Preference number: 5 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPVVGPE*GVAVDQ
Trigger: CTGGTCGACTGCCACCCCCAACTCTGGCCCCACCAC...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGCGTGATCTGGTGACTTaGGGGGTCATATCCATTGCC +
Preference number: 5 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLRDLVT*GVISIA
Trigger: GGCAATGGATATGACCCCCAAAGTCACCAGATCACG...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTCGTCCGGGCTAGACTaGGGACCCCTCGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: PHARDEPCAWDPSSCQLISSGLD*GPLVIW
Trigger: CCAGATCACGAGGGGTCCCAAGTCTAGCCCGGACGA...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCGTCTCCTCCACTCACTaGGCAGGAGTCAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSVSSTH*AGVRTV
Trigger: GACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGAC...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTCCACCTCTTCAACTGGCACGTCTCCTCCACTCACTaGGCAGGAGTCAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: VSSTHLAGVRTVHLFNWHVSSTH*AGVRTV
Trigger: GACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGAC...GTGCCAGTTGAAGAGGTGGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCGTGATACCGTGCCCCTaGCTGTTCCCTCATGCTCGT +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSVIPCP*LFPHAR
Trigger: ACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAGTGATACCGTGCCCCTaGCTGTTCCCTCATGCTCGT +
Preference number: 5 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIVIPCP*LFPHAR
Trigger: ACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS GCA 90 bp ACTTCATACAAGCTCCCGGGGTCAAGTCTGGTGAGGGTCAGGCGGTaGTGGTTGGCTGGAATGCCAGAGATGGTCCAATCGTCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: TSYKLPGSSLVRVRR*WLAGMPEMVQSSEE
Trigger: TTCCTCTGACGATTGGACCATCTCTGGCATTCCAGCCAACCAGCACCGCCTGACCCTCACCAGACTTGACCCCGGGAGCTTGTATGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000497495.1
ENST00000682979.1
CDS CCA 90 bp GCCATTCAGCTCCTTTCCATTCAGGCGCCAGGTTACATTCATCCTTaGAGGTTCCACCACGCAGCCCAAGATCACAGTGCCTCCGGGCTT +
Preference number: 5 (lower is better)
Translates to: AIQLLSIQAPGYIHP*RFHHAAQDHSASGL
Trigger: AAGCCCGGAGGCACTGTGATCTTGGGCTGCGTGGTGGAACCTCCAAGGATGAATGTAACCTGGCGCCTGAATGGAAAGGAGCTGAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000464546.5
ENST00000471963.6
ENST00000484034.1
ENST00000485230.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 90 bp AATCCTTTCTTCCACATCAGGGGCCTGTTAGGCTCTGTCTGCTCCTaGTCCACAGGTGCCCTGGGATGGTGCCTCACGGGTGTTCAGATT +
Preference number: 5 (lower is better)
Translates to: NPFFHIRGLLGSVCS*STGALGWCLTGVQI
Trigger: AATCTGAACACCCGTGAGGCACCATCCCAGGGCACCTGTGGACCAGGAGCAGACAGAGCCTAACAGGCCCCTGATGTGGAAGAAAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS CCA 90 bp GTCCCCCTGGCCAAAGCCAGTGCACACAGAACTGGAGCTTGGATGTaGCACCTCCAGGTATCTACCTCCCTTTCCATCTTTGTGAGCCCT +
Preference number: 5 (lower is better)
Translates to: VPLAKASAHRTGAWM*HLQVSTSLSIFVSP
Trigger: AGGGCTCACAAAGATGGAAAGGGAGGTAGATACCTGGAGGTGCCACATCCAAGCTCCAGTTCTGTGTGCACTGGCTTTGGCCAGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466059.5
ENST00000471963.6
CDS CCA 90 bp GATTCTCCCATGGCCTTTCAAGGCCCAGGACCTGGAGGGGTCTTCTaGGCAGCCCTTCCCCAAAGCAAGTTCTCAAAGGCCTCACAAGAA +
Preference number: 5 (lower is better)
Translates to: DSPMAFQGPGPGGVF*AALPQSKFSKASQE
Trigger: TTCTTGTGAGGCCTTTGAGAACTTGCTTTGGGGAAGGGCTGCCCAGAAGACCCCTCCAGGTCCTGGGCCTTGAAAGGCCATGGGAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463971.1
CDS-3UTR CAA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACGTCCCACAGTGTGGTaGTTAAGGGCAGTGATGACG +
Preference number: 5 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIRPTVW*LRAVMT
Trigger: CGTCATCACTGCCCTTAACAACCACACTGTGGGACG...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTGCTGCACATCTAACTaGAAGTCCTGGAGATTGGCT +
Preference number: 5 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPCCTSN*KSWRLA
Trigger: AGCCAATCTCCAGGACTTCAAGTTAGATGTGCAGCA...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTACCGGACCTGGGCTTaGGGGTGGCTCTCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPYRTWA*GWLSGR
Trigger: CCTGCCTGAGAGCCACCCCAAAGCCCAGGTCCGGTA...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCGCCTTGGGGTTATGCTaGGCCTGGAGGTCCGCAGCT +
Preference number: 5 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVALGLC*AWRSAA
Trigger: AGCTGCGGACCTCCAGGCCAAGCATAACCCCAAGGC...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGTCAGGGTTGCCGAGTTaGGAGGGTGATACAGGAGGT +
Preference number: 5 (lower is better)
Translates to: VIPCPLLFPHARDEPCAWSGLPS*EGDTGG
Trigger: ACCTCCTGTATCACCCTCCAAACTCGGCAACCCTGA...CCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCAGCATCTGCTCAGGGTaGCCGAGTTTGGAGGGTGAT +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSSICSG*PSLEGD
Trigger: ATCACCCTCCAAACTCGGCAACCCTGAGCAGATGCT...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTTCATATGAGTCTGTCTaGGAGGTGCGGGGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCSYESV*EVRGEL
Trigger: CAGCTCGCCCCGCACCTCCAAGACAGACTCATATGA...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTGCCATGATCTCGGGTTaGGGCCGCCGTCCAGTTCGG +
Preference number: 5 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPAMISG*GRRPVR
Trigger: CCGAACTGGACGGCGGCCCAAACCCGAGATCATGGC...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTCACGGAAGGACTGGATaGGGAACCCACCATTCCCAC +
Preference number: 5 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCHGRTG*GTHHSH
Trigger: GTGGGAATGGTGGGTTCCCAATCCAGTCCTTCCGTG...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp AGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTGGATTGGGGTGTTGTaGTTACTTGCTGGGATGTAC +
Preference number: 5 (lower is better)
Translates to: STGSSHLCGCLQAVIPCPWIGVL*LLAGMY
Trigger: GTACATCCCAGCAAGTAACAACAACACCCCAATCCA...GGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGCCATGGATTGGGGTGTaGTTGTTACTTGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLPWIGV*LLLAGM
Trigger: CATCCCAGCAAGTAACAACAACACCCCAATCCATGG...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTGGGGGTCATATCCATaGCCAAGATGGGTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSWGSYP*PRWVCL
Trigger: GAGGCAGACCCATCTTGGCAATGGATATGACCCCCA...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGGCAGGAGTCAGGACTGTCCACCTCTTCAACTGGCACAAGGCCCAAGCAGCATTGGGGGTCATATCCATaGCCAAGATGGGTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: WQESGLSTSSTGTRPKQHWGSYP*PRWVCL
Trigger: GAGGCAGACCCATCTTGGCAATGGATATGACCCCCA...ATGCTGCTTGGGCCTTGTGCCAGTTGAAGAGGTGGACAGTCCTGACTCCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR CAA 90 bp TGGGGACACCAGTCTCCTCCACTCACTTGGCAGGAGTCAGGACTGTCCACCTCTCGTGATCTGGTGACTTaGGGGGTCATATCCATTGCC +
Preference number: 5 (lower is better)
Translates to: WGHQSPPLTWQESGLSTSRDLVT*GVISIA
Trigger: GGCAATGGATATGACCCCCAAAGTCACCAGATCACG...AGAGGTGGACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGACTGGTGTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS-3UTR CAA 90 bp CAGGAGTCAGGACTGTCCACCTCTTCAACTGGCACAAGGCCCAAGCAGCATGGGCGTGATCTGGTGACTTaGGGGGTCATATCCATTGCC +
Preference number: 5 (lower is better)
Translates to: QESGLSTSSTGTRPKQHGRDLVT*GVISIA
Trigger: GGCAATGGATATGACCCCCAAAGTCACCAGATCACG...CCCATGCTGCTTGGGCCTTGTGCCAGTTGAAGAGGTGGACAGTCCTGACTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488486.5
CDS-3UTR CAA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCGTCCGGGCTAGACTaGGGACCCCTCGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVSSGLD*GPLVIW
Trigger: CCAGATCACGAGGGGTCCCAAGTCTAGCCCGGACGA...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTGGGTGGCTCTTGGCATTTTCCTaGGTCCAAACTGTCACCTCA +
Preference number: 5 (lower is better)
Translates to: RTMLAPHRETGGQVWAGWLLAFS*VQTVTS
Trigger: TGAGGTGACAGTTTGGACCAAGGAAAATGCCAAGAG...CCACCCAGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CAA 90 bp GGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTGAAGCCATTTGGCCCTaGGTTTCCACATGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: GLRTMLAPHRETGGQVWAEAIWP*VSTCWS
Trigger: AGACCAACATGTGGAAACCAAGGGCCAAATGGCTTC...AGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS TCA 90 bp TCCACGCCGTCATCGTCCCACGCAGCATGGTGTATCACAAAGGTCTaGAGCCAACGTCCCATAAGCCGCCAGGGTCACACAAAGAGATAC +
Preference number: 5 (lower is better)
Translates to: STPSSSHAAWCITKV*SQRPISRQGHTKRY
Trigger: GTATCTCTTTGTGTGACCCTGGCGGCTTATGGGACGTTGGCTTCAGACCTTTGTGATACACCATGCTGCGTGGGACGATGACGGCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000462425.1
ENST00000464546.5
ENST00000471963.6
ENST00000484034.1
ENST00000485230.5
ENST00000494687.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 90 bp TCATACAAGCTCCCGGGGTCAAGTCTGGTGAGGGTCAGGCGGTGCTaGTTGGCTGGAATGCCAGAGATGGTCCAATCGTCAGAGGAATTT +
Preference number: 5 (lower is better)
Translates to: SYKLPGSSLVRVRRC*LAGMPEMVQSSEEF
Trigger: AAATTCCTCTGACGATTGGACCATCTCTGGCATTCCAGCCAACCAGCACCGCCTGACCCTCACCAGACTTGACCCCGGGAGCTTGTATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000497495.1
ENST00000682979.1
CDS-3UTR CAA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTCGTCCCACAGTGTGGTaGTTAAGGGCAGTGATGACG +
Preference number: 5 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCRPTVW*LRAVMT
Trigger: CGTCATCACTGCCCTTAACAACCACACTGTGGGACG...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTACCTCACAGGTAAGCTaGGCACTCTGGCCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPTSQVS*ALWPQG
Trigger: CCCCTGGGGCCAGAGTGCCAAGCTTACCTGTGAGGT...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTCATATGAGTCTGTCTaGGAGGTGCGGGGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: PHARDEPCAWDPSSCQLISYESV*EVRGEL
Trigger: CAGCTCGCCCCGCACCTCCAAGACAGACTCATATGA...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCGCCATGATCTCGGGTTaGGGCCGCCGTCCAGTTCGG +
Preference number: 5 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVAMISG*GRRPVR
Trigger: CCGAACTGGACGGCGGCCCAAACCCGAGATCATGGC...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAATGATGGTGGTCTCATaGACCGCATCCGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIMMVVS*TASVKV
Trigger: CACCTTCACGGATGCGGTCAATGAGACCACCATCAT...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCATCGTCCGGGCTAGACTaGGGACCCCTCGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPSSGLD*GPLVIW
Trigger: CCAGATCACGAGGGGTCCCAAGTCTAGCCCGGACGA...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCAGGCTGCTCCTGGCGTaGGCAGCAGTCGTGATGGGG +
Preference number: 5 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVRLLLA*AAVVMG
Trigger: CCCCATCACGACTGCTGCCAACGCCAGGAGCAGCCT...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp ACGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCCCCTGCCCATGTCTCTaGGTGTCCTGTCTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: TEQFCHVKFCHALTNSPLPCPCL*VSCLSL
Trigger: CAGGGAGAGACAGGACACCAAGAGACATGGGCAGGG...GAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CAA 90 bp GGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTCTCTTGGCATTTTCCTaGGTCCAAACTGTCACCTCA +
Preference number: 5 (lower is better)
Translates to: GLRTMLAPHRETGGQVWALLAFS*VQTVTS
Trigger: TGAGGTGACAGTTTGGACCAAGGAAAATGCCAAGAG...AGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS TCA 90 bp CAGCATGTTCAGAGCCCGGACTCGAAACTTGTAGGAGGTGCCTGGTaGGAGGGACACTCACTGAACTCAGGAGCTGGGAAATACCTTCTG +
Preference number: 5 (lower is better)
Translates to: QHVQSPDSKLVGGAW*EGHSLNSGAGKYLL
Trigger: CAGAAGGTATTTCCCAGCTCCTGAGTTCAGTGAGTGTCCCTCTCACCAGGCACCTCCTACAAGTTTCGAGTCCGGGCTCTGAACATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463971.1
CDS CCA 90 bp GCCTGGGAGTCCTCCCAATGGCACCATAGTATACGGGCAGGAGGGTaGAAGGGCACTTCGAGGAAAACCCAGGTCTGTTGTATGTTTTTG +
Preference number: 5 (lower is better)
Translates to: AWESSQWHHSIRAGG*KGTSRKTQVCCMFL
Trigger: CAAAAACATACAACAGACCTGGGTTTTCCTCGAAGTGCCCTTCCACCCTCCTGCCCGTATACTATGGTGCCATTGGGAGGACTCCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS-3UTR CAA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTAGGTTACATTCATCCTaGGAGGTTCCACCACGCAGC +
Preference number: 5 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCRLHSS*EVPPRS
Trigger: GCTGCGTGGTGGAACCTCCAAGGATGAATGTAACCT...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCCGTCCCACAGTGTGGTaGTTAAGGGCAGTGATGACG +
Preference number: 5 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIRPTVW*LRAVMT
Trigger: CGTCATCACTGCCCTTAACAACCACACTGTGGGACG...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCATGAGACTCTGGCCTTaGGTGACGATGATGGTTTGG +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSMRLWP*VTMMVW
Trigger: CCAAACCATCATCGTCACCAAAGGCCAGAGTCTCAT...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCGTGTCGATGAGGAGGTaGCTCAGCAGGAAGCGCGTC +
Preference number: 5 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIVSMRR*LSRKRV
Trigger: GACGCGCTTCCTGCTGAGCAACCTCCTCATCGACAC...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTCAGGGTTGCCGAGTTaGGAGGGTGATACAGGAGGT +
Preference number: 5 (lower is better)
Translates to: PHARDEPCAWDPSSCQLISGLPS*EGDTGG
Trigger: ACCTCCTGTATCACCCTCCAAACTCGGCAACCCTGA...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAGGGATGTACATCCACTaGAGCATGATGGTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVIGMYIH*SMMVVS
Trigger: TGAGACCACCATCATGCTCAAGTGGATGTACATCCC...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCCCATGGATTGGGGTGTaGTTGTTACTTGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSPWIGV*LLLAGM
Trigger: CATCCCAGCAAGTAACAACAACACCCCAATCCATGG...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CCCGCGCCAGCCTGTGCGGTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTTATAAAAGCCATGGATaGGGGTGTTGTTGTTACTTG +
Preference number: 5 (lower is better)
Translates to: PAPACAVLSWVTPVRWQLYKSHG*GCCCYL
Trigger: CAAGTAACAACAACACCCCAATCCATGGCTTTTATA...AAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCACCGCACAGGCTGGCGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTGGGGGTCATATCCATaGCCAAGATGGGTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIWGSYP*PRWVCL
Trigger: GAGGCAGACCCATCTTGGCAATGGATATGACCCCCA...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCGTCTCCTCCACTCACTaGGCAGGAGTCAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVVSSTH*AGVRTV
Trigger: GACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGAC...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTGGGTGGTATCCCTTTATCCCTTaGCCACACAGTTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: RTMLAPHRETGGQVWAGWYPFIP*PHSFLF
Trigger: GAAAAGGAAACTGTGTGGCAAAGGGATAAAGGGATA...CCACCCAGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CAA 90 bp CACATGGAAATGGAATTTACCAGAATTATTCAGTTGGGAGGGACCTTAGAAGCCCCGAGGACCGAGAAGTaGCGGGCCGGAGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: HMEMEFTRIIQLGGTLEAPRTEK*RAGEGG
Trigger: CCCTCCCTCTCCGGCCCGCAACTTCTCGGTCCTCGG...GGCTTCTAAGGTCCCTCCCAACTGAATAATTCTGGTAAATTCCATTTCCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS CCA 90 bp CAGTCTCCCACTTTCTTTAGCTTCTTGTACTCCACACGGAAGGACTaGATTGGGAACCCACCATTCCCACGGGGAATCCAGGTCACGTAC +
Preference number: 5 (lower is better)
Translates to: QSPTFFSFLYSTRKD*IGNPPFPRGIQVTY
Trigger: GTACGTGACCTGGATTCCCCGTGGGAATGGTGGGTTCCCAATCCAGTCCTTCCGTGTGGAGTACAAGAAGCTAAAGAAAGTGGGAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS-3UTR CAA 90 bp TTTATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAGGTTACATTCATCCTaGGAGGTTCCACCACGCAGC +
Preference number: 5 (lower is better)
Translates to: FIIQAFGLCLPLTERQEARLHSS*EVPPRS
Trigger: GCTGCGTGGTGGAACCTCCAAGGATGAATGTAACCT...GGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CAA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCAGGTTACATTCATCCTaGGAGGTTCCACCACGCAGC +
Preference number: 5 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIRLHSS*EVPPRS
Trigger: GCTGCGTGGTGGAACCTCCAAGGATGAATGTAACCT...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATATGCTGCACATCTAACTaGAAGTCCTGGAGATTGGCT +
Preference number: 5 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVICCTSN*KSWRLA
Trigger: AGCCAATCTCCAGGACTTCAAGTTAGATGTGCAGCA...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCCATCCTGCCATAGCCTaGGGGTTATGCTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAIHPAIA*GLCLAW
Trigger: CCAGGCCAAGCATAACCCCAAGGCTATGGCAGGATG...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTCATCCTGCCATAGCCTaGGGGTTATGCTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPHPAIA*GLCLAW
Trigger: CCAGGCCAAGCATAACCCCAAGGCTATGGCAGGATG...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCAGGGTTGCCGAGTTaGGAGGGTGATACAGGAGGT +
Preference number: 5 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVSGLPS*EGDTGG
Trigger: ACCTCCTGTATCACCCTCCAAACTCGGCAACCCTGA...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCAGCATCTGCTCAGGGTaGCCGAGTTTGGAGGGTGAT +
Preference number: 5 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVSICSG*PSLEGD
Trigger: ATCACCCTCCAAACTCGGCAACCCTGAGCAGATGCT...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTCATATGAGTCTGTCTaGGAGGTGCGGGGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAISYESV*EVRGEL
Trigger: CAGCTCGCCCCGCACCTCCAAGACAGACTCATATGA...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGGGATGTACATCCACTaGAGCATGATGGTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: QAVIPCPLLFPHARDEPCGMYIH*SMMVVS
Trigger: TGAGACCACCATCATGCTCAAGTGGATGTACATCCC...ACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCACAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTGGATTGGGGTGTTGTaGTTACTTGCTGGGATGTAC +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSWIGVL*LLAGMY
Trigger: GTACATCCCAGCAAGTAACAACAACACCCCAATCCA...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCGTCTGTTGTATGTTTTaGCTTAGACCAGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: CPLLFPHARDEPCAWDPSVCCMF*LRPGPP
Trigger: TGGAGGGCCTGGTCTAAGCAAAAACATACAACAGAC...GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTGTCTCCTCCACTCACTaGGCAGGAGTCAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPVSSTH*AGVRTV
Trigger: GACAGTCCTGACTCCTGCCAAGTGAGTGGAGGAGAC...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATAAGTGCTGTACACATCTaGGTCTGTTCTCATGGGCAT +
Preference number: 5 (lower is better)
Translates to: VSRSTGSSHLCGCLQAVISAVHI*VCSHGH
Trigger: ATGCCCATGAGAACAGACCAAGATGTGTACAGCACT...TATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TCACTCCAGATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCACAAGGGTCAAGGTGTGTGAGCAGTaGGGACAGTGCACCTACAGC +
Preference number: 5 (lower is better)
Translates to: SLQIQPLLGVRFSKGTRVKVCEQ*GQCTYS
Trigger: GCTGTAGGTGCACTGTCCCAACTGCTCACACACCTT...GACCCTTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTATCTGGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS GCA 90 bp AGTATGTGCGCTGTGAGGCTGAAGATGAGATGGGAAACAAGAATCTaGCATGCTCTCAACCCCACCCTATGGTTCTCAGGCCCAACTGTC +
Preference number: 5 (lower is better)
Translates to: SMCAVRLKMRWETRI*HALNPTLWFSGPTV
Trigger: GACAGTTGGGCCTGAGAACCATAGGGTGGGGTTGAGAGCATGGCAGATTCTTGTTTCCCATCTCATCTTCAGCCTCACAGCGCACATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466059.5
ENST00000479182.5
CDS CCA 90 bp GGGTCTTTCAACCTATGTAGAGTGGGGCGTGCTACAGAATTCCCTTaGGGCTTGGTGTCCTTATCAGAAACAAGGACTGCTTCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: GSFNLCRVGRATEFP*GLVSLSETRTASAG
Trigger: CCCTGCAGAAGCAGTCCTTGTTTCTGATAAGGACACCAAGCCCCAAGGGAATTCTGTAGCACGCCCCACTCTACATAGGTTGAAAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466059.5
ENST00000479182.5
CDS-3UTR CAA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTTGAAGTCCTGGAGATaGGCTAGTGTCACAGTGGCT +
Preference number: 5 (lower is better)
Translates to: PHARDEPCAWDPSSCQLILKSWR*ASVTVA
Trigger: AGCCACTGTGACACTAGCCAATCTCCAGGACTTCAA...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCCAGCCACTCTTGTTaGACGCTGTACCGGACCTGG +
Preference number: 5 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVSSHSC*TLYRTW
Trigger: CCAGGTCCGGTACAGCGTCAAACAAGAGTGGCTGGA...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCATGAGACTCTGGCCTTaGGTGACGATGATGGTTTGG +
Preference number: 5 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIMRLWP*VTMMVW
Trigger: CCAAACCATCATCGTCACCAAAGGCCAGAGTCTCAT...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCGTGTCGATGAGGAGGTaGCTCAGCAGGAAGCGCGTC +
Preference number: 5 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLVSMRR*LSRKRV
Trigger: GACGCGCTTCCTGCTGAGCAACCTCCTCATCGACAC...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCAGCATCTGCTCAGGGTaGCCGAGTTTGGAGGGTGAT +
Preference number: 5 (lower is better)
Translates to: CSHGHLRKMFPVAPDPAISICSG*PSLEGD
Trigger: ATCACCCTCCAAACTCGGCAACCCTGAGCAGATGCT...GATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATTCTGGGGAGCGCCGGTaGCCCCCTCAGCATCTGCTC +
Preference number: 5 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYSGERR*PPQHLL
Trigger: GAGCAGATGCTGAGGGGGCAACCGGCGCTCCCCAGA...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGTATAAAAGCCATGGATaGGGGTGTTGTTGTTACTTG +
Preference number: 5 (lower is better)
Translates to: GSSHLCGCLQAVIPCPLLYKSHG*GCCCYL
Trigger: CAAGTAACAACAACACCCCAATCCATGGCTTTTATA...CAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCCGTGATCTGGTGACTTaGGGGGTCATATCCATTGCC +
Preference number: 5 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVRDLVT*GVISIA
Trigger: GGCAATGGATATGACCCCCAAAGTCACCAGATCACG...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCGTGATACCGTGCCCCTaGCTGTTCCCTCATGCTCGT +
Preference number: 5 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVVIPCP*LFPHAR
Trigger: ACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAAGTCTGGGCTAGCTACTGTTCTGATTaGACATTTCTGCAGTTAAGG +
Preference number: 5 (lower is better)
Translates to: GLRTMLAPHRETGGQVWASYCSD*TFLQLR
Trigger: CCTTAACTGCAGAAATGTCAAATCAGAACAGTAGCT...AGCCCAGACTTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CAA 90 bp GGTAGGACGTCTGTTTACTCACTTCCATCTAGCCTCATACAATGGGTCCTCATACCCTGCCCATGTCTCTaGGTGTCCTGTCTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: GRTSVYSLPSSLIQWVLIPCPCL*VSCLSL
Trigger: CAGGGAGAGACAGGACACCAAGAGACATGGGCAGGG...TATGAGGACCCATTGTATGAGGCTAGATGGAAGTGAGTAAACAGACGTCCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS-3UTR CAA 90 bp ATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCACAAGGGTCCCCCATCACCTAGAAACACCTGTCTaGGTAAGGCTCCTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: IQPLLGVRFSKGTRVPHHLETPV*VRLLFQ
Trigger: CTGGAAGAGGAGCCTTACCAAGACAGGTGTTTCTAG...GTGATGGGGGACCCTTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS TCA 90 bp TGCCTCAGGGCTATTGTAAGGATTGAGAGGCCCAGGCTGCACACATaGGAGATGAGATCATTCCTGCAAGCCTCCAGGAAGGAGGAAATT +
Preference number: 5 (lower is better)
Translates to: CLRAIVRIERPRLHT*EMRSFLQASRKEEI
Trigger: AATTTCCTCCTTCCTGGAGGCTTGCAGGAATGATCTCATCTCTCATGTGTGCAGCCTGGGCCTCTCAATCCTTACAATAGCCCTGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS TCA 90 bp GTGTGCCGTTCCTCAGCAACCTTCAAGGAGCAAGGGGACTATGTGTaGTTCCGCTTTATATGCCAACCAGGGACACACCCAGGTTTTCTA +
Preference number: 5 (lower is better)
Translates to: VCRSSATFKEQGDYV*FRFICQPGTHPGFL
Trigger: TAGAAAACCTGGGTGTGTCCCTGGTTGGCATATAAAGCGGAATCACACATAGTCCCCTTGCTCCTTGAAGGTTGCTGAGGAACGGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466059.5
ENST00000479182.5
CDS-3UTR CAA 90 bp CTGACCAATTCCCCTCTCTGTAGACACTCACTCCAGATACAGCCTCTACTTGGAAGGTTACATTCATCCTaGGAGGTTCCACCACGCAGC +
Preference number: 5 (lower is better)
Translates to: LTNSPLCRHSLQIQPLLGRLHSS*EVPPRS
Trigger: GCTGCGTGGTGGAACCTCCAAGGATGAATGTAACCT...TCCAAGTAGAGGCTGTATCTGGAGTGAGTGTCTACAGAGAGGGGAATTGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CAA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCACGGAAGGACTGGATaGGGAACCCACCATTCCCAC +
Preference number: 5 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLHGRTG*GTHHSH
Trigger: GTGGGAATGGTGGGTTCCCAATCCAGTCCTTCCGTG...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAATGGAGTGCCAGTACTaGTCCCCTTCCACCATATCC +
Preference number: 5 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPMECQY*SPSTIS
Trigger: GGATATGGTGGAAGGGGACAAGTACTGGCACTCCAT...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTCACAGATCATCACGTaGCTGAACTCGCTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPSQIIT*LNSLSP
Trigger: AGGGGAGAGCGAGTTCAGCAACGTGATGATCTGTGA...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCGAAGACTTCCGAGCTTaGGTCTCACAGATCATCACG +
Preference number: 5 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVEDFRA*VSQIIT
Trigger: CGTGATGATCTGTGAGACCAAAGCTCGGAAGTCTTC...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCACGTGATCTGGTGACTTaGGGGGTCATATCCATTGCC +
Preference number: 5 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPRDLVT*GVISIA
Trigger: GGCAATGGATATGACCCCCAAAGTCACCAGATCACG...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS CCA 90 bp TTCGAGCTGCTACCCTCAGACGGTATAAATGTCGACAAGACTTCATaGGTCATGGGTTCCAGGAAGCTTGTTCTGAAACTCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: FELLPSDGINVDKTS*VMGSRKLVLKLCCS
Trigger: GCTGCAGCAGAGTTTCAGAACAAGCTTCCTGGAACCCATGACCCATGAAGTCTTGTCGACATTTATACCGTCTGAGGGTAGCAGCTCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000485230.5
ENST00000495514.5
ENST00000498710.1
ENST00000682979.1
CDS-3UTR CAA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCATTGAAGTCCTGGAGATaGGCTAGTGTCACAGTGGCT +
Preference number: 5 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPLKSWR*ASVTVA
Trigger: AGCCACTGTGACACTAGCCAATCTCCAGGACTTCAA...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGCCTTGGGGTTATGCTaGGCCTGGAGGTCCGCAGCT +
Preference number: 5 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYALGLC*AWRSAA
Trigger: AGCTGCGGACCTCCAGGCCAAGCATAACCCCAAGGC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCACCATGGATTGGGGTGTaGTTGTTACTTGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPPWIGV*LLLAGM
Trigger: CATCCCAGCAAGTAACAACAACACCCCAATCCATGG...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCATGGAGTGCCAGTACTaGTCCCCTTCCACCATATCC +
Preference number: 5 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVMECQY*SPSTIS
Trigger: GGATATGGTGGAAGGGGACAAGTACTGGCACTCCAT...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTGAAGACTTCCGAGCTTaGGTCTCACAGATCATCACG +
Preference number: 5 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPEDFRA*VSQIIT
Trigger: CGTGATGATCTGTGAGACCAAAGCTCGGAAGTCTTC...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp ATACAGCCTCTACTTGGAGTGAGGTTTTCCAAGGGCACAAGGGTCCCCCATCACAGATTCCACTCAAAGTaGGACTCCCAATACTTGAGG +
Preference number: 5 (lower is better)
Translates to: IQPLLGVRFSKGTRVPHHRFHSK*DSQYLR
Trigger: CCTCAAGTATTGGGAGTCCAACTTTGAGTGGAATCT...GTGATGGGGGACCCTTGTGCCCTTGGAAAACCTCACTCCAAGTAGAGGCTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484034.1
CDS-3UTR CAA 90 bp ACGGAACAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCACCAGAATTATTCAGTaGGGAGGGACCTTAGAAGCC +
Preference number: 5 (lower is better)
Translates to: TEQFCHVKFCHALTNSPLTRIIQ*GGTLEA
Trigger: GGCTTCTAAGGTCCCTCCCAACTGAATAATTCTGGT...GAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTGTTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS TCA 90 bp AGGAATATTCTGACTTTCAACCACTGTCCTCCCCATGAATGCCACTaGAATCCTTTCTTCCACATCAGGGGCCTGTTAGGCTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: RNILTFNHCPPHECH*NPFFHIRGLLGSVC
Trigger: GCAGACAGAGCCTAACAGGCCCCTGATGTGGAAGAAAGGATTTCAGTGGCATTCATGGGGAGGACAGTGGTTGAAAGTCAGAATATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS GCA 90 bp CAGGCAATGACTGCTGTGTTTCCCTCATCCACTTCAATCACGTGCTaGACATCTAACTTGAAGTCCTGGAGATTGGCTAGTGTCACAGTG +
Preference number: 5 (lower is better)
Translates to: QAMTAVFPSSTSITC*TSNLKSWRLASVTV
Trigger: CACTGTGACACTAGCCAATCTCCAGGACTTCAAGTTAGATGTGCAGCACGTGATTGAAGTGGATGAGGGAAACACAGCAGTCATTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000471963.6
ENST00000495514.5
ENST00000682979.1
CDS GCA 90 bp TGGCAGGCAATGACTGCTGTGTTTCCCTCATCCACTTCAATCACGTaGTGCACATCTAACTTGAAGTCCTGGAGATTGGCTAGTGTCACA +
Preference number: 5 (lower is better)
Translates to: WQAMTAVFPSSTSIT*CTSNLKSWRLASVT
Trigger: TGTGACACTAGCCAATCTCCAGGACTTCAAGTTAGATGTGCAGCACGTGATTGAAGTGGATGAGGGAAACACAGCAGTCATTGCCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000471963.6
ENST00000495514.5
ENST00000682979.1
CDS CCA 90 bp TTCGAGCTGCTACCCTCAGACGGTATAAATGTCGACAAGACTTCATaGGTCATGGGTTCCAGGAAGCTTGTTCTGAAACCTCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: FELLPSDGINVDKTS*VMGSRKLVLKPPKR
Trigger: CCTCTTTGGAGGTTTCAGAACAAGCTTCCTGGAACCCATGACCCATGAAGTCTTGTCGACATTTATACCGTCTGAGGGTAGCAGCTCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462425.1
CDS-3UTR CAA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCAGGTTACATTCATCCTaGGAGGTTCCACCACGCAGC +
Preference number: 5 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLRLHSS*EVPPRS
Trigger: GCTGCGTGGTGGAACCTCCAAGGATGAATGTAACCT...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCATGAGACTCTGGCCTTaGGTGACGATGATGGTTTGG +
Preference number: 5 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVMRLWP*VTMMVW
Trigger: CCAAACCATCATCGTCACCAAAGGCCAGAGTCTCAT...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGTCAGGCGGTGCTGGTaGGCTGGAATGCCAGAGATG +
Preference number: 5 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYVRRCW*AGMPEM
Trigger: CATCTCTGGCATTCCAGCCAACCAGCACCGCCTGAC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCACTTTCTTTAGCTTCTaGTACTCCACACGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: HLRKMFPVAPDPAICVGVTFFSF*YSTRKD
Trigger: GTCCTTCCGTGTGGAGTACAAGAAGCTAAAGAAAGT...GACACCCACACAGATGGCTGGATCCGGTGCTACGGGAAACATTTTCCTAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTGCTTTCCTGGGTGACTCCTGTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAGGGTGTTGTTGTTACTaGCTGGGATGTACATCCACT +
Preference number: 5 (lower is better)
Translates to: VLSWVTPVRWQLLYFPSPGCCCY*LGCTST
Trigger: AGTGGATGTACATCCCAGCAAGTAACAACAACACCC...TGGAGAGGGAAAATAAAGAAGCTGCCACCTAACAGGAGTCACCCAGGAAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp GTTAGGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTAGTGCTGTACACATCTaGGTCTGTTCTCATGGGCAT +
Preference number: 5 (lower is better)
Translates to: VRWQLLYFPSPTSTGRTPSAVHI*VCSHGH
Trigger: ATGCCCATGAGAACAGACCAAGATGTGTACAGCACT...AGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS TCA 90 bp CTACTTGGAGAGGAATATTCTGACTTTCAACCACTGTCCTCCCCATaGATGCCACTGAAATCCTTTCTTCCACATCAGGGGCCTGTTAGG +
Preference number: 5 (lower is better)
Translates to: LLGEEYSDFQPLSSP*MPLKSFLPHQGPVR
Trigger: CCTAACAGGCCCCTGATGTGGAAGAAAGGATTTCAGTGGCATTCATGGGGAGGACAGTGGTTGAAAGTCAGAATATTCCTCTCCAAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS GCA 90 bp TGGCAGGCAATGACTGCTGTGTTTCCCTCATCCACTTCAATCACGTaGTGCACATCTAACTTGAAGTCCTGGAGATCCACTTCTTCTACT +
Preference number: 5 (lower is better)
Translates to: WQAMTAVFPSSTSIT*CTSNLKSWRSTSST
Trigger: AGTAGAAGAAGTGGATCTCCAGGACTTCAAGTTAGATGTGCAGCACGTGATTGAAGTGGATGAGGGAAACACAGCAGTCATTGCCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498710.1
CDS CCA 90 bp TTCGAGCTGCTACCCTCAGACGGTATAAATGTCGACAAGACTTCATaGGTCATGGGTTCCAGGAAGCTTGTTCTGAAACTCTCAATGGTC +
Preference number: 5 (lower is better)
Translates to: FELLPSDGINVDKTS*VMGSRKLVLKLSMV
Trigger: GACCATTGAGAGTTTCAGAACAAGCTTCCTGGAACCCATGACCCATGAAGTCTTGTCGACATTTATACCGTCTGAGGGTAGCAGCTCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464546.5
CDS-3UTR CAA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTGCTGCACATCTAACTaGAAGTCCTGGAGATTGGCT +
Preference number: 5 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVCCTSN*KSWRLA
Trigger: AGCCAATCTCCAGGACTTCAAGTTAGATGTGCAGCA...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATTCCAGCCACTCTTGTTaGACGCTGTACCGGACCTGG +
Preference number: 5 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYSSHSC*TLYRTW
Trigger: CCAGGTCCGGTACAGCGTCAAACAAGAGTGGCTGGA...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTATAAAAGCCATGGATaGGGGTGTTGTTGTTACTTG +
Preference number: 5 (lower is better)
Translates to: PHARDEPCAWDPSSCQLIYKSHG*GCCCYL
Trigger: CAAGTAACAACAACACCCCAATCCATGGCTTTTATA...GATAAGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCGAAGACTTCCGAGCTTaGGTCTCACAGATCATCACG +
Preference number: 5 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLEDFRA*VSQIIT
Trigger: CGTGATGATCTGTGAGACCAAAGCTCGGAAGTCTTC...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCAGTGCTGTACACATCTaGGTCTGTTCTCATGGGCAT +
Preference number: 5 (lower is better)
Translates to: WQLLYFPSPTSTGRTPYVSAVHI*VCSHGH
Trigger: ATGCCCATGAGAACAGACCAAGATGTGTACAGCACT...GACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp TATAATCCAGGCCTTCGGACTATGCTTGCCCCTCACAGAGAGACAGGAGGCCAATTGGACTCCCAATACTaGAGGATGAGAAAAACTATC +
Preference number: 5 (lower is better)
Translates to: YNPGLRTMLAPHRETGGQLDSQY*RMRKTI
Trigger: GATAGTTTTTCTCATCCTCAAGTATTGGGAGTCCAA...TTGGCCTCCTGTCTCTCTGTGAGGGGCAAGCATAGTCCGAAGGCCTGGATTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484034.1
CDS-3UTR CAA 90 bp CCTTGGTTTCCACATGTTGGTCTGAGGACCTATGTTCTTTGTCACATAATAGGAAAGGTGTGTGAGCAGTaGGGACAGTGCACCTACAGC +
Preference number: 5 (lower is better)
Translates to: PWFPHVGLRTYVLCHIIGKVCEQ*GQCTYS
Trigger: GCTGTAGGTGCACTGTCCCAACTGCTCACACACCTT...TCCTATTATGTGACAAAGAACATAGGTCCTCAGACCAACATGTGGAAACCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS GCA 90 bp AGCCGGCCTCCGGCTGAGCTGAATGGAATCCACTGTTTAAACACATaGATTTCTCATATTGCAAGGTCCCCAAATGCAAATCACCTATGT +
Preference number: 5 (lower is better)
Translates to: SRPPAELNGIHCLNT*ISHIARSPNANHLC
Trigger: ACATAGGTGATTTGCATTTGGGGACCTTGCAATATGAGAAATGCATGTGTTTAAACAGTGGATTCCATTCAGCTCAGCCGGAGGCCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466059.5
ENST00000479182.5
CDS GCA 90 bp CAGGCAATGACTGCTGTGTTTCCCTCATCCACTTCAATCACGTGCTaGACATCTAACTTGAAGTCCTGGAGATCCACTTCTTCTACTTTC +
Preference number: 5 (lower is better)
Translates to: QAMTAVFPSSTSITC*TSNLKSWRSTSSTF
Trigger: GAAAGTAGAAGAAGTGGATCTCCAGGACTTCAAGTTAGATGTGCAGCACGTGATTGAAGTGGATGAGGGAAACACAGCAGTCATTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498710.1
CDS-3UTR CAA 90 bp TCTTTCTGGGATATCAGCTTCTGCCTAAATTGTGAGAGGTGGTGTTTCAAAAGATGGGGGTCATATCCATaGCCAAGATGGGTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SFWDISFCLNCERWCFKRWGSYP*PRWVCL
Trigger: GAGGCAGACCCATCTTGGCAATGGATATGACCCCCA...TCTTTTGAAACACCACCTCTCACAATTTAGGCAGAAGCTGATATCCCAGAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473008.1
ENST00000488486.5
CDS TCA 90 bp CACAAGGGTCCCCCATCACTGGGCATTACTAGGCAGCTACTGTTCTaGTTTGACATTTCTGCAGTTAAGGCCCATTTTATGCTAAGAGTA +
Preference number: 5 (lower is better)
Translates to: HKGPPSLGITRQLLF*FDISAVKAHFMLRV
Trigger: TACTCTTAGCATAAAATGGGCCTTAACTGCAGAAATGTCAAATCAGAACAGTAGCTGCCTAGTAATGCCCAGTGATGGGGGACCCTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS GCA 90 bp CTCTCTGATACAGTTTCCTCATTTGTAAAAAGGCTTAATGTATGCTaGCTCAGGGCTATTGTAAGGATTGAGAGGCCCAGGCTGCACACA +
Preference number: 5 (lower is better)
Translates to: LSDTVSSFVKRLNVC*LRAIVRIERPRLHT
Trigger: TGTGTGCAGCCTGGGCCTCTCAATCCTTACAATAGCCCTGAGGCAGCATACATTAAGCCTTTTTACAAATGAGGAAACTGTATCAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS-3UTR CAA 90 bp AGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCACTTTCTTTAGCTTCTaGTACTCCACACGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: SFFIFPLQPQRVGLLMSLTFFSF*YSTRKD
Trigger: GTCCTTCCGTGTGGAGTACAAGAAGCTAAAGAAAGT...GAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAGAGGGAAAATAAAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CAGTTCTGCCATGTCAAGTTCTGCCATGCACTGACCAATTCCCCTCTCTGTAGAAGCTACTGTTCTGATTaGACATTTCTGCAGTTAAGG +
Preference number: 5 (lower is better)
Translates to: QFCHVKFCHALTNSPLCRSYCSD*TFLQLR
Trigger: CCTTAACTGCAGAAATGTCAAATCAGAACAGTAGCT...TCTACAGAGAGGGGAATTGGTCAGTGCATGGCAGAACTTGACATGGCAGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS-3UTR CAA 90 bp GTCCCCCATCACTGGGCATTACTAGGCAGCTACTGTTCTGATTTGACATTTCTGACTATGTCAAGTCACTaGGCCTTTACTTTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: VPHHWALLGSYCSDLTFLTMSSH*AFTLLC
Trigger: ACAGAGCAAAGTAAAGGCCAAGTGACTTGACATAGT...CAGAAATGTCAAATCAGAACAGTAGCTGCCTAGTAATGCCCAGTGATGGGGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS GCA 90 bp AATCTCTCTGATACAGTTTCCTCATTTGTAAAAAGGCTTAATGTATaGTGCCTCAGGGCTATTGTAAGGATTGAGAGGCCCAGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: NLSDTVSSFVKRLNV*CLRAIVRIERPRLH
Trigger: GTGCAGCCTGGGCCTCTCAATCCTTACAATAGCCCTGAGGCAGCATACATTAAGCCTTTTTACAAATGAGGAAACTGTATCAGAGAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS TCA 90 bp GAATCGCCTCATTATTGCATTTCTGCTACTTGGAGAGGAATATTCTaGCTTTCAACCACTGTCCTCCCCATGAATGCCACTGAAATCCTT +
Preference number: 5 (lower is better)
Translates to: ESPHYCISATWRGIF*LSTTVLPMNATEIL
Trigger: AAGGATTTCAGTGGCATTCATGGGGAGGACAGTGGTTGAAAGTCAGAATATTCCTCTCCAAGTAGCAGAAATGCAATAATGAGGCGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS-3UTR CAA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGGGTGTTGTTGTTACTaGCTGGGATGTACATCCACT +
Preference number: 5 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYGCCCY*LGCTST
Trigger: AGTGGATGTACATCCCAGCAAGTAACAACAACACCC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp CTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAAACATATGTCTGTTGTATGTTTTaGCTTAGACCAGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: LQPQRVGLLMSLQNYKTYVCCMF*LRPGPP
Trigger: TGGAGGGCCTGGTCTAAGCAAAAACATACAACAGAC...ATATGTTTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTTGAGGTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000495514.5
CDS-3UTR CAA 90 bp ATAAGTATAATGGCAACTAGAAACACCTGTCTTGGTAAGGCTCCTCTTCCAGCTTATCCCTTTATCCCTTaGCCACACAGTTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: ISIMATRNTCLGKAPLPAYPFIP*PHSFLF
Trigger: GAAAAGGAAACTGTGTGGCAAAGGGATAAAGGGATA...AGCTGGAAGAGGAGCCTTACCAAGACAGGTGTTTCTAGTTGCCATTATACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485230.5
CDS GCA 72 bp CATCGCCCGGCCAGACCGCTGCGGCAGGGAACGAGATaGGGCGCCCCTGGGCCCCGTAGCGGCTGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: HRPARPLRQGTR*GAPGPRSGCSP
Trigger: GGGGCTGCAGCCGCTACGGGGCCCAGGGGCGCCGCATCTCGTTCCCTGCCGCAGCGGTCTGGCCGGGCGATG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462425.1
CDS GCA 72 bp GGACCGAGAAGTTGCGGGCCGGAGAGGGAGGGCGCGTaGGGGCGTGTTGTGGCTGTGGCGGGCGTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: GPRSCGPEREGA*GRVVAVAGVRV
Trigger: CACCCTCACGCCCGCCACAGCCACAACACGCCCGCACGCGCCCTCCCTCTCCGGCCCGCAACTTCTCGGTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000485230.5
ENST00000495514.5
ENST00000498710.1
ENST00000682979.1
CDS TCA 72 bp ACAGCGCCGCGCCGCACGGACACACAACACGCTCGGTaGCACCGGGGACACACAACACGGGCGAGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: TAPRRTDTQHAR*HRGHTTRASGR
Trigger: GCGGCCGCTCGCCCGTGTTGTGTGTCCCCGGTGTCACCGAGCGTGTTGTGTGTCCGTGCGGCGCGGCGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000485230.5
ENST00000495514.5
ENST00000498710.1
ENST00000682979.1
CDS GCA 72 bp GCTGAAGCTCGCCTGGGCAGTGCTGCTGGGGCTTCATaGCCGGGTAGCCCACTGCAGCCGAGGGGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: AEARLGSAAGAS*PGSPLQPRGSP
Trigger: GGGGCTGCCCCTCGGCTGCAGTGGGCTACCCGGGCATGAAGCCCCAGCAGCACTGCCCAGGCGAGCTTCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000488486.5
ENST00000495514.5
ENST00000682979.1
CDS GCA 72 bp CCGCTGCCCCGGGCTGCCCAACCCCATTGTCGGCCATaGAGCGGTAGGTGCCTGAGTCCTCCTCGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: PLPRAAQPHCRP*SGRCLSPPRWW
Trigger: CCACCAGCGAGGAGGACTCAGGCACCTACCGCTGCATGGCCGACAATGGGGTTGGGCAGCCCGGGGCAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 72 bp AGCACGCGCAGGGCCCTGCGGGAGAGCCGGAGGCGCTaGCTGGAGATGAGGGGCACAGCATTCCTCAGCCAC +
Preference number: 6 (lower is better)
Translates to: STRRALRESRRR*LEMRGTAFLSH
Trigger: GTGGCTGAGGAATGCTGTGCCCCTCATCTCCAGCCAGCGCCTCCGGCTCTCCCGCAGGGCCCTGCGCGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS GCA 72 bp GAGCTGAGGATGATGGGAGCCTCGGCGGGAGCCCCCTaGCCCTTCTCTCCTGGACACTGCGGGGAAGCAGGC +
Preference number: 6 (lower is better)
Translates to: ELRMMGASAGAP*PFSPGHCGEAG
Trigger: GCCTGCTTCCCCGCAGTGTCCAGGAGAGAAGGGGCAGGGGGCTCCCGCCGAGGCTCCCATCATCCTCAGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000497495.1
ENST00000682979.1
CDS CCA 72 bp GGGGAGAGGCGGCCGTGGTCTGGCTGGCTGCTGCTCTaGGGACTGGCTCCAGGGTCGTCTCTCTGGATCTGC +
Preference number: 6 (lower is better)
Translates to: GERRPWSGWLLL*GLAPGSSLWIC
Trigger: GCAGATCCAGAGAGACGACCCTGGAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACCACGGCCGCCTCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 72 bp TGTAGCCCGACACCACGTAGGGCCGAGAGGGGGCGCTaGGCTCGCTCTCCCCCAGCATGTTCAGAGCCCGGA +
Preference number: 6 (lower is better)
Translates to: CSPTPRRAERGR*ARSPPACSEPG
Trigger: TCCGGGCTCTGAACATGCTGGGGGAGAGCGAGCCCAGCGCCCCCTCTCGGCCCTACGTGGTGTCGGGCTACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000463971.1
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 72 bp CCAGGACGACCCCGACAATCAGATAGGGCAGGTCGCTaGAGCGAGCCACCATGGCCCCAGTGCCCACCGGCC +
Preference number: 6 (lower is better)
Translates to: PGRPRQSDRAGR*SEPPWPQCPPA
Trigger: GGCCGGTGGGCACTGGGGCCATGGTGGCTCGCTCCAGCGACCTGCCCTATCTGATTGTCGGGGTCGTCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 72 bp CGGGAGAGGCGGCCGTGGTCTGGCTGGCTGCTGCTCTaGGGACTGGCTCCAGGGTCGTCTCTCTGGATCTGC +
Preference number: 6 (lower is better)
Translates to: RERRPWSGWLLL*GLAPGSSLWIC
Trigger: GCAGATCCAGAGAGACGACCCTGGAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACCACGGCCGCCTCTCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497495.1
CDS GCA 72 bp GCTTACGGGAGAGGCGGCCGTGGTCTGGCTGGCTGCTaGTCTGGGGACTGGCTCCAGGGTCGTCTCTCTGGA +
Preference number: 6 (lower is better)
Translates to: AYGRGGRGLAGC*SGDWLQGRLSG
Trigger: TCCAGAGAGACGACCCTGGAGCCAGTCCCCAGAGCAGCAGCCAGCCAGACCACGGCCGCCTCTCCCGTAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497495.1
CDS CCA 72 bp CCTGGAGATTGGCTAGTGTCACAGTGGCTGGCACGCTaGCCACAGCCCCCGCAGGCATCCGGGCCACACACT +
Preference number: 6 (lower is better)
Translates to: PGDWLVSQWLAR*PQPPQASGPHT
Trigger: AGTGTGTGGCCCGGATGCCTGCGGGGGCTGTGGCCAGCGTGCCAGCCACTGTGACACTAGCCAATCTCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000471963.6
ENST00000495514.5
ENST00000682979.1
CDS CCA 72 bp CAGACTCACTGGCTAGTGTCACAGTGGCTGGCACGCTaGCCACAGCCCCCGCAGGCATCCGGGCCACACACT +
Preference number: 6 (lower is better)
Translates to: QTHWLVSQWLAR*PQPPQASGPHT
Trigger: AGTGTGTGGCCCGGATGCCTGCGGGGGCTGTGGCCAGCGTGCCAGCCACTGTGACACTAGCCAGTGAGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS CCA 72 bp ATGCTTGGCCTGGAGGTCCGCAGCTGGACTACGGCATaGGCGCTCCCAACCTCGTTCTCGGCCATGCACTGG +
Preference number: 6 (lower is better)
Translates to: MLGLEVRSWTTA*ALPTSFSAMHW
Trigger: CCAGTGCATGGCCGAGAACGAGGTTGGGAGCGCCCATGCCGTAGTCCAGCTGCGGACCTCCAGGCCAAGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 72 bp GCAAGTGCCAGATGGAGTGGGAGAAACCCTTGGCCCTaGTGGGACAGGCAGGCCTCTCCCAGAGGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: ASARWSGRNPWP*WDRQASPRGCC
Trigger: GCAGCAGCCTCTGGGAGAGGCCTGCCTGTCCCACCAGGGCCAAGGGTTTCTCCCACTCCATCTGGCACTTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS CCA 72 bp CCACACCCAAGAATGCGCTACCTGCTGAAGCTCGCCTaGGCAGTGCTGCTGGGGCTTCATGCCCGGGTAGCC +
Preference number: 6 (lower is better)
Translates to: PHPRMRYLLKLA*AVLLGLHARVA
Trigger: GGCTACCCGGGCATGAAGCCCCAGCAGCACTGCCCAGGCGAGCTTCAGCAGGTAGCGCATTCTTGGGTGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479182.5
CDS CCA 72 bp GAGGCAAAGGAGCAGACTCACTGGCTAGTGTCACAGTaGCTGGCACGCTGGCCACAGCCCCCGCAGGCATCC +
Preference number: 6 (lower is better)
Translates to: EAKEQTHWLVSQ*LARWPQPPQAS
Trigger: GGATGCCTGCGGGGGCTGTGGCCAGCGTGCCAGCCACTGTGACACTAGCCAGTGAGTCTGCTCCTTTGCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484034.1
ENST00000485230.5
CDS CAA 90 bp CTGCCCTCATGCCGAGGCCGCCACACCAGTTCATATGAGTCTGTCTaGGAGGTGCGGGGCGAGCTGAGGATGATGGGAGCCTCGGCGGGA +
Preference number: 6 (lower is better)
Translates to: LPSCRGRHTSSYESV*EVRGELRMMGASAG
Trigger: TCCCGCCGAGGCTCCCATCATCCTCAGCTCGCCCCGCACCTCCAAGACAGACTCATATGAACTGGTGTGGCGGCCTCGGCATGAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000497495.1
ENST00000682979.1
CDS TCA 72 bp GATCCTTCTTCCACCCGAGAAGCTTCTGGGAACCGCTaGGGCGAAACCACCATCGCCCGGCCAGACCGCTGC +
Preference number: 6 (lower is better)
Translates to: DPSSTREASGNR*GETTIARPDRC
Trigger: GCAGCGGTCTGGCCGGGCGATGGTGGTTTCGCCTCAGCGGTTCCCAGAAGCTTCTCGGGTGGAAGAAGGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462425.1
CDS GCA 72 bp TCCTTGGAGGTTCCACCACGCAGCCCAAGATCACAGTaGCTCCGGGCTTCTGGACGGTGGACGCAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: SLEVPPRSPRSQ*LRASGRWTQAG
Trigger: TCCAGCCTGCGTCCACCGTCCAGAAGCCCGGAGGCACTGTGATCTTGGGCTGCGTGGTGGAACCTCCAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000464546.5
ENST00000471963.6
ENST00000484034.1
ENST00000485230.5
ENST00000495514.5
ENST00000682979.1
CDS GCA 72 bp AGCATGTGGGCCTCCCGGAAGCTCACCAGAGGGTGGTaGAGGGCACACCTCATCAGTGCAGAGAGTGCAGGC +
Preference number: 6 (lower is better)
Translates to: SMWASRKLTRGW*RAHLISAESAG
Trigger: GCCTGCACTCTCTGCACTGATGAGGTGTGCCCTGCACCACCCTCTGGTGAGCTTCCGGGAGGCCCACATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466059.5
ENST00000471963.6
ENST00000479182.5
CDS CCA 72 bp AGCCTTGGGGTTATGCTTGGCCTGGAGGTCCGCAGCTaGACTACGGCATGGGCGCTCCCAACCTCGTTCTCG +
Preference number: 6 (lower is better)
Translates to: SLGVMLGLEVRS*TTAWALPTSFS
Trigger: CGAGAACGAGGTTGGGAGCGCCCATGCCGTAGTCCAGCTGCGGACCTCCAGGCCAAGCATAACCCCAAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 72 bp GACCTGCTTGCGGTGTTTCACCACATAGTAGAGGATTaGCGCCCGGCCACTGCCCTCATGCCGAGGCCGCCA +
Preference number: 6 (lower is better)
Translates to: DLLAVFHHIVED*RPATALMPRPP
Trigger: TGGCGGCCTCGGCATGAGGGCAGTGGCCGGGCGCCAATCCTCTACTATGTGGTGAAACACCGCAAGCAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273395.8
ENST00000479182.5
ENST00000682979.1
CDS CCA 72 bp CAATCAGATAGGGCAGGTCGCTGGAGCGAGCCACCATaGCCCCAGTGCCCACCGGCCGCTCTATGGTTTCAG +
Preference number: 6 (lower is better)
Translates to: QSDRAGRWSEPP*PQCPPAALWFQ
Trigger: CTGAAACCATAGAGCGGCCGGTGGGCACTGGGGCCATGGTGGCTCGCTCCAGCGACCTGCCCTATCTGATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 72 bp CTGTCCACTGGCCTGGTGGCCTGGGAGTCCTCCCAATaGCACCATAGTATACGGGCAGGAGGGTGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: LSTGLVAWESSQ*HHSIRAGGWKG
Trigger: GCCCTTCCACCCTCCTGCCCGTATACTATGGTGCCATTGGGAGGACTCCCAGGCCACCAGGCCAGTGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273395.8
ENST00000355385.7
ENST00000466059.5
ENST00000479182.5
ENST00000495514.5
ENST00000682979.1
CDS CCA 72 bp AGTGCCAGATGGAGTGGGAGAAACCCTTGGCCCTGGTaGGACAGGCAGGCCTCTCCCAGAGGCTGCTGCCAA +
Preference number: 6 (lower is better)
Translates to: SARWSGRNPWPW*DRQASPRGCCQ
Trigger: TTGGCAGCAGCCTCTGGGAGAGGCCTGCCTGTCCCACCAGGGCCAAGGGTTTCTCCCACTCCATCTGGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466059.5
CDS CCA 72 bp GGGCCGGGGCGCTGGTGTCAACCTTCGGTGGAAGTTTaGGAGGCTGGCTGGATCCTTCTTCCACCCGAGAAG +
Preference number: 6 (lower is better)
Translates to: GPGRWCQPSVEV*EAGWILLPPEK
Trigger: CTTCTCGGGTGGAAGAAGGATCCAGCCAGCCTCCCAAACTTCCACCGAAGGTTGACACCAGCGCCCCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462425.1
CDS CCA 72 bp GGAGCATGGGGCCGGGGCGCTGGTGTCAACCTTCGGTaGAAGTTTGGGAGGCTGGCTGGATCCTTCTTCCAC +
Preference number: 6 (lower is better)
Translates to: GAWGRGAGVNLR*KFGRLAGSFFH
Trigger: GTGGAAGAAGGATCCAGCCAGCCTCCCAAACTTCCACCGAAGGTTGACACCAGCGCCCCGGCCCCATGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462425.1