Pregenerated sensors for BNIP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000176171Ensembl transcript IDs: ENST00000368636.8, ENST00000540159.3, ENST00000631806.1, ENST00000633835.1
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTCCCCGCTGAGAGGCTGGGACCAGCCCGAGGAGGAGCCGTTTTaGCTTCCCGCTCTGGCTCTTCACCACCGCTGCGGCGAACGCTCT | + |
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Preference number: 1 (lower is better) Translates to: SSPLRGWDQPEEEPF*LPALALHHRCGERS Trigger: AGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTCCCAGCCTCTCAGCGGGGAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
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| 3UTR CCA 90 bp | ACTGTCTGCACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTaGGACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: TVCTPGLEPSSPLRG*DQPEEEPFWLPALA Trigger: AGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTCCCAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
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| 3UTR GCA 90 bp | GAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCTaGGGCGAACGCTCTTCAGAACCCACAGCGGCGCCTGCCTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: EEEPFWLPALALHHR*GERSSEPTAAPAWS Trigger: AGACCAGGCAGGCGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
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| 3UTR CCA 90 bp | GAGGCTGGGACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTaGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAG | + |
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Preference number: 1 (lower is better) Translates to: EAGTSPRRSRFGFPL*LFTTAAANALQNPQ Trigger: CTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTCCCAGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
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| 3UTR CCA 90 bp | TGTGCCCAAGAGCTAGGAGAAAGCCACGCACACGGGAGGGCGAGGTaGAGACACGGGCAGCGCTCAGGTCCCGGCCCAGGAAACTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: CAQELGESHAHGRAR*RHGQRSGPGPGNSV Trigger: CACTGAGTTTCCTGGGCCGGGACCTGAGCGCTGCCCGTGTCTCCACCTCGCCCTCCCGTGTGCGTGGCTTTCTCCTAGCTCTTGGGCACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR GCA 90 bp | GGTCTTTCCAGTCTGTCCAACACACGGCAGCCACAGAACACTGTCTaGACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: GLSSLSNTRQPQNTV*TPGLEPSSPLRGWD Trigger: GTCCCAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGGCTGCCGTGTGTTGGACAGACTGGAAAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
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| 3UTR CCA 90 bp | CAGCACCACAGGGCGCCTGTGCTGGGGCCTTTGGGGGCTGCAGGCTaGTGGTTTCTGGACCTGAACAGTGACTACGTGGGTGTTTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: QHHRAPVLGPLGAAG*WFLDLNSDYVGVCE Trigger: TTCACAAACACCCACGTAGTCACTGTTCAGGTCCAGAAACCACCAGCCTGCAGCCCCCAAAGGCCCCAGCACAGGCGCCCTGTGGTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR TCA 90 bp | GAGTGTCAGAAAAGGCTTTTCGGCAATAGAGAGGCTCGCTCCAGCTaGCCAGCGGGCATCACTCCCGGAGGGAGGAGGATGGGTCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: ECQKRLFGNREARSS*PAGITPGGRRMGLQ Trigger: CTGGAGACCCATCCTCCTCCCTCCGGGAGTGATGCCCGCTGGTCAGCTGGAGCGAGCCTCTCTATTGCCGAAAAGCCTTTTCTGACACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR GCA 90 bp | CTGGCCTGTGGGCGGTGGTGTGGTGGGCACTGTGAGCGCAGACAGTaGTGCAGCAGCTTTCGGGGCAGATTTTATCGTGTGGTTCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: LACGRWCGGHCERRQ*CSSFRGRFYRVVLK Trigger: TTTCAGAACCACACGATAAAATCTGCCCCGAAAGCTGCTGCAGCACTGTCTGCGCTCACAGTGCCCACCACACCACCGCCCACAGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR TCA 90 bp | GAGGTCAGACCTAAGAAGCCCTGCTTTGACTCCGTTTATATTCAGTaGGCAACAGGCAGACTCGTCAGGCCAGACAGCAGCACCACAGGG | + |
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Preference number: 1 (lower is better) Translates to: EVRPKKPCFDSVYIQ*ATGRLVRPDSSTTG Trigger: CCCTGTGGTGCTGCTGTCTGGCCTGACGAGTCTGCCTGTTGCTCACTGAATATAAACGGAGTCAAAGCAGGGCTTCTTAGGTCTGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR TCA 90 bp | GTTACTAGAACAACAGTCCTGTCTGGAGGAAGTACAGCAGGTAACTaGGACCCTCCACCTACAGCAGAGCTGGGTGCATTCCCGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: VTRTTVLSGGSTAGN*DPPPTAELGAFPPQ Trigger: CTGTGGCGGGAATGCACCCAGCTCTGCTGTAGGTGGAGGGTCTCAGTTACCTGCTGTACTTCCTCCAGACAGGACTGTTGTTCTAGTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR CCA 90 bp | GCAGCATCAGGCTCTGAAAACCCGGGCAGGACGAAGGACAGTAGCTaGGAAGTAGTGGCTGCAGAAATCCATCCTGAAACGAAGGGCTTA | + |
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Preference number: 1 (lower is better) Translates to: AASGSENPGRTKDSS*EVVAAEIHPETKGL Trigger: TAAGCCCTTCGTTTCAGGATGGATTTCTGCAGCCACTACTTCCCAGCTACTGTCCTTCGTCCTGCCCGGGTTTTCAGAGCCTGATGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR CCA 90 bp | TCACTCAGAGTTCAGCCATTGTCATCTGTGAGGGGGACACGTGGTTaGCTTTGTTGTGTGCTAACTTTGATGGTGACCAGGGGGTTCACT | + |
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Preference number: 1 (lower is better) Translates to: SLRVQPLSSVRGTRG*LCCVLTLMVTRGFT Trigger: AGTGAACCCCCTGGTCACCATCAAAGTTAGCACACAACAAAGCCAACCACGTGTCCCCCTCACAGATGACAATGGCTGAACTCTGAGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| 3UTR CCA 90 bp | GGTTTCACTCAGAGTTCAGCCATTGTCATCTGTGAGGGGGACACGTaGTTGGCTTTGTTGTGTGCTAACTTTGATGGTGACCAGGGGGTT | + |
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Preference number: 1 (lower is better) Translates to: GFTQSSAIVICEGDT*LALLCANFDGDQGV Trigger: AACCCCCTGGTCACCATCAAAGTTAGCACACAACAAAGCCAACCACGTGTCCCCCTCACAGATGACAATGGCTGAACTCTGAGTGAAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| 3UTR CAA 90 bp | CTCCTCCCCGCTGAGAGGCTGGGACCAGCCCGAGGAGGAGCCGTTTaGGCTTCCCGCTCTGGCTCTTCACCACCGCTGCGGCGAACGCTC | + |
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Preference number: 2 (lower is better) Translates to: LLPAERLGPARGGAV*ASRSGSSPPLRRTL Trigger: GAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTCCCAGCCTCTCAGCGGGGAGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCAACACACGGCAGCCACAGAACACTGTCTGCACGCCAGGACTAGAGCCCACAGGGCGCCTGTGCTaGGGCCTTTGGGGGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LSNTRQPQNTVCTPGLEPTGRLC*GLWGLQ Trigger: CTGCAGCCCCCAAAGGCCCCAGCACAGGCGCCCTGT...GGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGGCTGCCGTGTGTTGGACAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR TCA 90 bp | GCTGACCAGCGGGCATCACTCCCGGAGGGAGGAGGATGGGTCTCCAGGAAAGGGCTTCAACCCCAGATGTaGGCCCTCTGGCCAACCTAC | + |
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Preference number: 2 (lower is better) Translates to: ADQRASLPEGGGWVSRKGLQPQM*ALWPTY Trigger: GTAGGTTGGCCAGAGGGCTCACATCTGGGGTTGAAG...CCCTTTCCTGGAGACCCATCCTCCTCCCTCCGGGAGTGATGCCCGCTGGTCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR GCA 90 bp | GGATGGGTCTCCAGGAAAGGGCAGAATCGGAAGCCTGGCTGGCCTGGCCTGTGGGAGCGCAGACAGTGCTaGAGCAGCTTTCGGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GWVSRKGQNRKPGWPGLWERRQC*SSFRGR Trigger: TCTGCCCCGAAAGCTGCTGCAGCACTGTCTGCGCTC...CCACAGGCCAGGCCAGCCAGGCTTCCGATTCTGCCCTTTCCTGGAGACCCATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR CCA 90 bp | GGATGGGTCTCCAGGAAAGGGCAGAATCGGAAGCCTGGCTGGCCTGGCCTGTGGAGTTCGAGATCAGCCTaGGCAACGTGGCGAAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: GWVSRKGQNRKPGWPGLWSSRSA*ATWRSP Trigger: GGGGCTTCGCCACGTTGCCCAGGCTGATCTCGAACT...CCACAGGCCAGGCCAGCCAGGCTTCCGATTCTGCCCTTTCCTGGAGACCCATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGGATGGGTCTCCAGGAAAGGGCAGAATCGGAAGCCTGGCTGGCCTGGCCCCACAGAACACTGTCTaGACGCCAGGACTAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: EEDGSPGKGRIGSLAGLAPQNTV*TPGLEP Trigger: GGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGG...GGCCAGGCCAGCCAGGCTTCCGATTCTGCCCTTTCCTGGAGACCCATCCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR TCA 90 bp | AACACTGTCTGCACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTGGGACGGTGGTTTCTGGACCTaGACAGTGACTACGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: NTVCTPGLEPSSPLRGWDGGFWT*TVTTWV Trigger: CACCCACGTAGTCACTGTTCAGGTCCAGAAACCACC...GTCCCAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR GCA 90 bp | TTCCGGTCTTTCCAGTCTGTCCAACACACGGCAGCCACAGAACACTGTCTGCACACCACAGGGCGCCTGTaGTGGGGCCTTTGGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: FRSFQSVQHTAATEHCLHTTGRL*WGLWGL Trigger: CAGCCCCCAAAGGCCCCAGCACAGGCGCCCTGTGGT...GTGCAGACAGTGTTCTGTGGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR CCA 90 bp | ACACGGGCAGCGCTCAGGTCCCGGCCCAGGAAACTCAGTGGCTTTTATCCCGTTTTTGGCTTCCCGCTCTaGCTCTTCACCACCGCTGCG | + |
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Preference number: 2 (lower is better) Translates to: TRAALRSRPRKLSGFYPVFGFPL*LFTTAA Trigger: CGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAA...AACGGGATAAAAGCCACTGAGTTTCCTGGGCCGGGACCTGAGCGCTGCCCGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCAACACACGGCAGCCACAGAACACTGTCTGCACGCCAGGACTAGAGCCCCCCCACGACATGCCATaGCAGGAGTCACACAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LSNTRQPQNTVCTPGLEPPHDMP*QESHSH Trigger: GTGACTGTGTGACTCCTGTCATGGCATGTCGTGGGG...GGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGGCTGCCGTGTGTTGGACAG 60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCTGCGGCGAACAGTACAGCAGGTAACTaGGACCCTCCACCTACAGCA | + |
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Preference number: 2 (lower is better) Translates to: RRSRFGFPLWLFTTAAANSTAGN*DPPPTA Trigger: TGCTGTAGGTGGAGGGTCTCAGTTACCTGCTGTACT...GTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR GCA 90 bp | TCTGGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGCGCCTTACGAATAAATCACTaGAACCCAGAATCGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: SGSSPPLRRTLFRTHSGALRINH*NPESPH Trigger: GTGGGGCGATTCTGGGTTGCAGTGATTTATTCGTAA...GGCGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGCGCCTGCCAGACCTAAGAAGCCCTaGTTTGACTCCGTTTATATT | + |
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Preference number: 2 (lower is better) Translates to: ALHHRCGERSSEPTAAPARPKKP*FDSVYI Trigger: AATATAAACGGAGTCAAAGCAGGGCTTCTTAGGTCT...GGCAGGCGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR CCA 90 bp | TTACAGCTGAAACAGGGTAGCTCACTGTGGTTAGAGCTTATGCAAGGGGACTGGGCAGAATCGGAAGCCTaGCTGGCCTGGCCTGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LQLKQGSSLWLELMQGDWAESEA*LAWPVG Trigger: GCCCACAGGCCAGGCCAGCCAGGCTTCCGATTCTGC...CCAGTCCCCTTGCATAAGCTCTAACCACAGTGAGCTACCCTGTTTCAGCTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR CAA 90 bp | CCACTGTGCCCGGCCATACAGGTGGTTTCACTCAGAGTTCAGCCATaGTCATCTGTGAGGGGGACACGTGGTTGGCTTTGTTGTGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: PLCPAIQVVSLRVQP*SSVRGTRGWLCCVL Trigger: TAGCACACAACAAAGCCAACCACGTGTCCCCCTCACAGATGACAATGGCTGAACTCTGAGTGAAACCACCTGTATGGCCGGGCACAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCCATCACACTGGCCCAGTCCCAGAGCTTAGTACCTCCAACTGGTTGTTTTTGTGAGGGGGACACGTaGTTGGCTTTGTTGTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GAITLAQSQSLVPPTGCFCEGDT*LALLCA Trigger: AGCACACAACAAAGCCAACCACGTGTCCCCCTCACA...AAAACAACCAGTTGGAGGTACTAAGCTCTGGGACTGGGCCAGTGTGATGGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| 3UTR CAA 90 bp | TCCAACTCAGTGCTGGGGGAAGTCACCTACCAGGGCAAGATGGTGTaGCTAGTTCATCACCACCAGCCTCACCAAAGCCAACTGCTTAAA | + |
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Preference number: 2 (lower is better) Translates to: SNSVLGEVTYQGKMV*LVHHHQPHQSQLLK Trigger: TTTAAGCAGTTGGCTTTGGTGAGGCTGGTGGTGATGAACTAGCAACACCATCTTGCCCTGGTAGGTGACTTCCCCCAGCACTGAGTTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR TCA 90 bp | AGTTCAGCCATTGTCATCTGTGAGGGGGACACGTGGTTGGCTTTGTTGTGTGCTTTAAGCGTGGAAAGGTaGAACATCAAGGCGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SSAIVICEGDTWLALLCALSVER*NIKAAG Trigger: GCCTGCCGCCTTGATGTTTCACCTTTCCACGCTTAA...AGCACACAACAAAGCCAACCACGTGTCCCCCTCACAGATGACAATGGCTGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCATCACACTGGCCCAGTCCCAGAGCTTAGTACCTCCAACTGGTTGTTTTATGATCTCCACTCACTaGAACCTCTGCCTTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: GAITLAQSQSLVPPTGCFMISTH*NLCLLG Trigger: ACCCAGAAGGCAGAGGTTGCAGTGAGTGGAGATCAT...AAAACAACCAGTTGGAGGTACTAAGCTCTGGGACTGGGCCAGTGTGATGGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCCGTTTATATTCAGTGAGCAACAGGCAGACTCGTCAGGCCAGACAGCAGCAAATCGCCCCACGACATaGCATGACAGGAGTCACACA | + |
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Preference number: 2 (lower is better) Translates to: TPFIFSEQQADSSGQTAANRPTT*HDRSHT Trigger: TGTGTGACTCCTGTCATGGCATGTCGTGGGGCGATT...TGCTGCTGTCTGGCCTGACGAGTCTGCCTGTTGCTCACTGAATATAAACGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGCCATCACACTGGCCCAGTCCCAGAGCTTAGTACCTCCAACTGGTTGTTTTAGGGGGACACGTGGTTaGCTTTGTTGTGTGCTAACT | + |
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Preference number: 2 (lower is better) Translates to: GAITLAQSQSLVPPTGCFRGTRG*LCCVLT Trigger: AGTTAGCACACAACAAAGCCAACCACGTGTCCCCCT...AAAACAACCAGTTGGAGGTACTAAGCTCTGGGACTGGGCCAGTGTGATGGCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| 3UTR CAA 90 bp | TTCACTCAGAGTTCAGCCATTGTCATCTGTGAGGGGGACACGTGGTaGGCTTTGTTGTGTGCTAACTTTGATGGTGACCAGGGGGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: FTQSSAIVICEGDTW*ALLCANFDGDQGVH Trigger: GTGAACCCCCTGGTCACCATCAAAGTTAGCACACAACAAAGCCAACCACGTGTCCCCCTCACAGATGACAATGGCTGAACTCTGAGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| 3UTR CAA 90 bp | TCACCTACACACAGGACAAAGAGGTCAGACCTAAGAAGCCCTGCTTaGACTCCGTTTATATTCAGTGAGCAACAGGCAGACTCGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SPTHRTKRSDLRSPA*TPFIFSEQQADSSG Trigger: GCCTGACGAGTCTGCCTGTTGCTCACTGAATATAAACGGAGTCAAAGCAGGGCTTCTTAGGTCTGACCTCTTTGTCCTGTGTGTAGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR CAA 90 bp | AGGATCACCAAACCGAATGCTGTTTCCACACAGAAAGCTTCTGCTTaGTTCCAACTCAGTGCTGGGGGAAGTCACCTACCAGGGCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: RITKPNAVSTQKASA*FQLSAGGSHLPGQD Trigger: ATCTTGCCCTGGTAGGTGACTTCCCCCAGCACTGAGTTGGAACAAAGCAGAAGCTTTCTGTGTGGAAACAGCATTCGGTTTGGTGATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR TCA 90 bp | AGATGCAGGAGTGTCAGAAAAGGCTTTTCGGCAATAGAGAGGCTCGCTCCAGCTTCCGTTTATATTCAGTaGGCAACAGGCAGACTCGTC | + |
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Preference number: 2 (lower is better) Translates to: RCRSVRKGFSAIERLAPASVYIQ*ATGRLV Trigger: GACGAGTCTGCCTGTTGCTCACTGAATATAAACGGA...AGCTGGAGCGAGCCTCTCTATTGCCGAAAAGCCTTTTCTGACACTCCTGCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCATCACACTGGCCCAGTCCCAGAGCTTAGTACCTCCAACTGGTTGTTTTAGACTGAGAGATGACTaGTTCCAAGGTAGCATCAAC | + |
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Preference number: 2 (lower is better) Translates to: GAITLAQSQSLVPPTGCFRLRDD*FQGSIN Trigger: GTTGATGCTACCTTGGAAGCAGTCATCTCTCAGTCT...AAAACAACCAGTTGGAGGTACTAAGCTCTGGGACTGGGCCAGTGTGATGGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| 3UTR-3UTR GCA 90 bp | ATCGTATTCTTACATAGAAGGATCACCAAACCGAATGCTGTTTCCACACAGAAATGTGAGCGCAGACAGTaGTGCAGCAGCTTTCGGGGC | + |
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Preference number: 2 (lower is better) Translates to: IVFLHRRITKPNAVSTQKCERRQ*CSSFRG Trigger: GCCCCGAAAGCTGCTGCAGCACTGTCTGCGCTCACA...TTTCTGTGTGGAAACAGCATTCGGTTTGGTGATCCTTCTATGTAAGAATACGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR CAA 90 bp | GCGAAACTCAAGCCAGTAAAGTCGGAGACTGCATTGGTTCCTTCATaGCTGAGAGTTACTAGAACAACAGTCCTGTCTGGAGGAAGTACA | + |
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Preference number: 2 (lower is better) Translates to: AKLKPVKSETALVPS*LRVTRTTVLSGGST Trigger: TGTACTTCCTCCAGACAGGACTGTTGTTCTAGTAACTCTCAGCAATGAAGGAACCAATGCAGTCTCCGACTTTACTGGCTTGAGTTTCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR CAA 90 bp | TGGGCAACAAGAGCGAAACTCAAGCCAGTAAAGTCGGAGACTGCATaGGTTCCTTCATTGCTGAGAGTTACTAGAACAACAGTCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: WATRAKLKPVKSETA*VPSLLRVTRTTVLS Trigger: AGACAGGACTGTTGTTCTAGTAACTCTCAGCAATGAAGGAACCAATGCAGTCTCCGACTTTACTGGCTTGAGTTTCGCTCTTGTTGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR CAA 90 bp | GCCAACTGCTTAAAAATGAAGCCCCTGCCCTCATGTGGTTTAAGTTaGGTAGTGGGAGAGATGTCCCAAACTAAAGATGCAGGAGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: ANCLKMKPLPSCGLS*VVGEMSQTKDAGVS Trigger: TGACACTCCTGCATCTTTAGTTTGGGACATCTCTCCCACTACCAAACTTAAACCACATGAGGGCAGGGGCTTCATTTTTAAGCAGTTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR-3UTR TCA 90 bp | ATCGTATTCTTACATAGAAGGATCACCAAACCGAATGCTGTTTCCACACAGAAAAGTACTACACAGAAATaGGACTGCTTTCACCTACAC | + |
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Preference number: 2 (lower is better) Translates to: IVFLHRRITKPNAVSTQKSTTQK*DCFHLH Trigger: GTGTAGGTGAAAGCAGTCTCATTTCTGTGTAGTACT...TTTCTGTGTGGAAACAGCATTCGGTTTGGTGATCCTTCTATGTAAGAATACGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| 3UTR CCA 72 bp | GAGCTAGGAGAAAGCCACGCACACGGGAGGGCGAGGTaGAGACACGGGCAGCGCTCAGGTCCCGGCCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ELGESHAHGRAR*RHGQRSGPGPG Trigger: TCCTGGGCCGGGACCTGAGCGCTGCCCGTGTCTCCACCTCGCCCTCCCGTGTGCGTGGCTTTCTCCTAGCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR GCA 72 bp | CTCGTCAGGCCAGACAGCAGCACCACAGGGCGCCTGTaGTGGGGCCTTTGGGGGCTGCAGGCTGGTGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LVRPDSSTTGRL*WGLWGLQAGGF Trigger: GAAACCACCAGCCTGCAGCCCCCAAAGGCCCCAGCACAGGCGCCCTGTGGTGCTGCTGTCTGGCCTGACGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR CCA 72 bp | GTCAGGCCAGACAGCAGCACCACAGGGCGCCTGTGCTaGGGCCTTTGGGGGCTGCAGGCTGGTGGTTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VRPDSSTTGRLC*GLWGLQAGGFW Trigger: CCAGAAACCACCAGCCTGCAGCCCCCAAAGGCCCCAGCACAGGCGCCCTGTGGTGCTGCTGTCTGGCCTGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR CCA 72 bp | ACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTaGGACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TPGLEPSSPLRG*DQPEEEPFWLP Trigger: GGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTCCCAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| 3UTR CCA 72 bp | AGAATCGGAAGCCTGGCTGGCCTGGCCTGTGGGCGGTaGTGTGGTGGGCACTGTGAGCGCAGACAGTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RIGSLAGLACGR*CGGHCERRQCC Trigger: GCAGCACTGTCTGCGCTCACAGTGCCCACCACACCACCGCCCACAGGCCAGGCCAGCCAGGCTTCCGATTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR GCA 72 bp | CCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCTaGGGCGAACGCTCTTCAGAACCCACAGCGGCGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PFWLPALALHHR*GERSSEPTAAP Trigger: AGGCGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| 3UTR CCA 72 bp | ACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTaGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TSPRRSRFGFPL*LFTTAAANALQ Trigger: CTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGGCATTCCGGTCTTTCCAGTCTGTCCAACACACGGCAGCCACAGAACACTCCTGTGCTGGGGCCTTaGGGGGCTGCAGGCTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: QWHSGLSSLSNTRQPQNTPVLGP*GAAGWW Trigger: CCACCAGCCTGCAGCCCCCAAAGGCCCCAGCACAGG...AGTGTTCTGTGGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGAATGCCACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAGGATGGGTCTCCAGGAAAGGGCAGAATCGGAAGCCTGGCTGGCCTGGCCTGTAATCCCAGCACTTaGGAGGCCGAGGTGAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: EEDGSPGKGRIGSLAGLACNPST*EAEVSH Trigger: ATGGCTCACCTCGGCCTCCAAAGTGCTGGGATTACA...GGCCAGGCCAGCCAGGCTTCCGATTCTGCCCTTTCCTGGAGACCCATCCTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR GCA 72 bp | AGTCTGTCCAACACACGGCAGCCACAGAACACTGTCTaGACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLSNTRQPQNTV*TPGLEPSSPLR Trigger: TCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGGCTGCCGTGTGTTGGACAGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| 3UTR TCA 72 bp | AAAAGGCTTTTCGGCAATAGAGAGGCTCGCTCCAGCTaGCCAGCGGGCATCACTCCCGGAGGGAGGAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: KRLFGNREARSS*PAGITPGGRRM Trigger: CATCCTCCTCCCTCCGGGAGTGATGCCCGCTGGTCAGCTGGAGCGAGCCTCTCTATTGCCGAAAAGCCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR GCA 72 bp | AACCCACAGCGGCGCCTGCCTGGTCTCTGTGTTTTCTaGAGGGTGAGTGAGTATAAGCAGCCAGGAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: NPQRRLPGLCVF*RVSEYKQPGKA Trigger: GGCCTTTCCTGGCTGCTTATACTCACTCACCCTGCAGAAAACACAGAGACCAGGCAGGCGCCGCTGTGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| 3UTR GCA 72 bp | CGGTGGTGTGGTGGGCACTGTGAGCGCAGACAGTGCTaGAGCAGCTTTCGGGGCAGATTTTATCGTGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RWCGGHCERRQC*SSFRGRFYRVV Trigger: AACCACACGATAAAATCTGCCCCGAAAGCTGCTGCAGCACTGTCTGCGCTCACAGTGCCCACCACACCACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR TCA 72 bp | CAGTGGCTTTTATCCCGTTTCCTTCAACCCCAGATGTaGGCCCTCTGGCCAACCTACCTAACCCACCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: QWLLSRFLQPQM*ALWPTYLTHLP Trigger: GGGCAGGTGGGTTAGGTAGGTTGGCCAGAGGGCTCACATCTGGGGTTGAAGGAAACGGGATAAAAGCCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR TCA 72 bp | GGCCTTTGGGGGCTGCAGGCTGGTGGTTTCTGGACCTaGACAGTGACTACGTGGGTGTTTGTGAAAATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GLWGLQAGGFWT*TVTTWVFVKMH Trigger: GTGCATTTTCACAAACACCCACGTAGTCACTGTTCAGGTCCAGAAACCACCAGCCTGCAGCCCCCAAAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR CCA 72 bp | GGCTCTGAAAACCCGGGCAGGACGAAGGACAGTAGCTaGGAAGTAGTGGCTGCAGAAATCCATCCTGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: GSENPGRTKDSS*EVVAAEIHPET Trigger: CGTTTCAGGATGGATTTCTGCAGCCACTACTTCCCAGCTACTGTCCTTCGTCCTGCCCGGGTTTTCAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR TCA 72 bp | ACAACAGTCCTGTCTGGAGGAAGTACAGCAGGTAACTaGGACCCTCCACCTACAGCAGAGCTGGGTGCATTC | + |
|
Preference number: 3 (lower is better) Translates to: TTVLSGGSTAGN*DPPPTAELGAF Trigger: GAATGCACCCAGCTCTGCTGTAGGTGGAGGGTCTCAGTTACCTGCTGTACTTCCTCCAGACAGGACTGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR TCA 72 bp | AATGAGGATCCCGAGGCCTTGCCCCCAGAGTCTGCTTaGCAGTTCTGGAAAAGGCTCCAGAAAGCAAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: NEDPEALPPESA*QFWKRLQKANC Trigger: GCAGTTTGCTTTCTGGAGCCTTTTCCAGAACTGTCAAGCAGACTCTGGGGGCAAGGCCTCGGGATCCTCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR TCA 72 bp | CCTAAGAAGCCCTGCTTTGACTCCGTTTATATTCAGTaGGCAACAGGCAGACTCGTCAGGCCAGACAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PKKPCFDSVYIQ*ATGRLVRPDSS Trigger: GCTGCTGTCTGGCCTGACGAGTCTGCCTGTTGCTCACTGAATATAAACGGAGTCAAAGCAGGGCTTCTTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR CCA 72 bp | CACACAGAAAGCTTCTGCTTTGTTCCAACTCAGTGCTaGGGGAAGTCACCTACCAGGGCAAGATGGTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: HTESFCFVPTQC*GKSPTRARWCC Trigger: GCAACACCATCTTGCCCTGGTAGGTGACTTCCCCCAGCACTGAGTTGGAACAAAGCAGAAGCTTTCTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR GCA 72 bp | TTCCACACAGAAAGCTTCTGCTTTGTTCCAACTCAGTaGTGGGGGAAGTCACCTACCAGGGCAAGATGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: FHTESFCFVPTQ*WGKSPTRARWC Trigger: ACACCATCTTGCCCTGGTAGGTGACTTCCCCCAGCACTGAGTTGGAACAAAGCAGAAGCTTTCTGTGTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR CCA 72 bp | GTTCAGCCATTGTCATCTGTGAGGGGGACACGTGGTTaGCTTTGTTGTGTGCTAACTTTGATGGTGACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VQPLSSVRGTRG*LCCVLTLMVTR Trigger: CCTGGTCACCATCAAAGTTAGCACACAACAAAGCCAACCACGTGTCCCCCTCACAGATGACAATGGCTGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| 3UTR CCA 72 bp | CAGAGTTCAGCCATTGTCATCTGTGAGGGGGACACGTaGTTGGCTTTGTTGTGTGCTAACTTTGATGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QSSAIVICEGDT*LALLCANFDGD Trigger: GTCACCATCAAAGTTAGCACACAACAAAGCCAACCACGTGTCCCCCTCACAGATGACAATGGCTGAACTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGAAAGCTTCTGCTTTGTTCCAACTCAGTGCTGGGGGAAGTCACCTACCATCATGTGGTTTAAGTTaGGTAGTGGGAGAGATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: TQKASALFQLSAGGSHLPSCGLS*VVGEMS Trigger: GGACATCTCTCCCACTACCAAACTTAAACCACATGA...TGGTAGGTGACTTCCCCCAGCACTGAGTTGGAACAAAGCAGAAGCTTTCTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR CCA 72 bp | AGCCAACTGCTTAAAAATGAAGCCCCTGCCCTCATGTaGTTTAAGTTTGGTAGTGGGAGAGATGTCCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SQLLKNEAPALM*FKFGSGRDVPN Trigger: GTTTGGGACATCTCTCCCACTACCAAACTTAAACCACATGAGGGCAGGGGCTTCATTTTTAAGCAGTTGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR TCA 72 bp | ATGTTACAATCTAACGAAAAACACCTCCAGAAAACTTaGTTCTTGGTCTCCCATCTGTCTAAAGCACTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: MLQSNEKHLQKT*FLVSHLSKALQ Trigger: CTGGAGTGCTTTAGACAGATGGGAGACCAAGAATCAAGTTTTCTGGAGGTGTTTTTCGTTAGATTGTAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| 3UTR GCA 72 bp | CATCCACATTCTCCAAATGTAAGACTGAGAGATGACTaGTTCCAAGGTAGCATCAACAAAGATTTTTACAAA | + |
|
Preference number: 3 (lower is better) Translates to: HPHSPNVRLRDD*FQGSINKDFYK Trigger: TTTGTAAAAATCTTTGTTGATGCTACCTTGGAAGCAGTCATCTCTCAGTCTTACATTTGGAGAATGTGGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR CCA 90 bp | ACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTGGGACCAGCCCGAGGAGGGCTGGCCTGGCCTGTaGGCGGTGGTGTGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPGLEPSSPLRGWDQPEEGWPGL*AVVWWA Trigger: TGCCCACCACACCACCGCCCACAGGCCAGGCCAGCC...CTCCTCGGGCTGGTCCCAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | GGACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGAGCCCTCCTCCCCGCTaGGAGGCTGGGACCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GPARGGAVLASRSGSSPPSPPPR*EAGTSP Trigger: CGGGCTGGTCCCAGCCTCTCAGCGGGGAGGAGGGCT...CGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR TCA 90 bp | ACAGAACACTGTCTGCACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTGAGCCCTCCTCCCCGCTaGGAGGCTGGGACCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TEHCLHARTRALLPAERLSPPPR*EAGTSP Trigger: CGGGCTGGTCCCAGCCTCTCAGCGGGGAGGAGGGCT...CAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR GCA 90 bp | GAGGCTGGGACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACAGGGCGCCTGTaGTGGGGCCTTTGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAGTSPRRSRFGFPLWLFTTGRL*WGLWGL Trigger: CAGCCCCCAAAGGCCCCAGCACAGGCGCCCTGTGGT...GAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTCCCAGCCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | GCTGACCAGCGGGCATCACTCCCGGAGGGAGGAGGATGGGTCTCCAGGAAAGGGACAGGGCGCCTGTGCTaGGGCCTTTGGGGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ADQRASLPEGGGWVSRKGTGRLC*GLWGLQ Trigger: CTGCAGCCCCCAAAGGCCCCAGCACAGGCGCCCTGT...CCCTTTCCTGGAGACCCATCCTCCTCCCTCCGGGAGTGATGCCCGCTGGTCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | GGACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGTCCCCGCTGAGAGGCTaGGACCAGCCCGAGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPARGGAVLASRSGSSPPSPLRG*DQPEEE Trigger: CTCCTCCTCGGGCTGGTCCCAGCCTCTCAGCGGGGA...CGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR TCA 90 bp | CACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTGGGACCAGCCCGAGGAGGCAGCATCAGGCTCTaGAAACCCGGGCAGGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: HARTRALLPAERLGPARGGSIRL*KPGQDE Trigger: TTCGTCCTGCCCGGGTTTTCAGAGCCTGATGCTGCC...TCCTCGGGCTGGTCCCAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | GCTCTGGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGCGAATCGGAAGCCTGGCTaGCCTGGCCTGTGGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALALHHRCGERSSEPTAANRKPG*PGLWAV Trigger: CACCGCCCACAGGCCAGGCCAGCCAGGCTTCCGATT...CGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | ACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCTAGGCAGAGGCTGCAGTaGGCCGAGATCACGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSPRRSRFGFPLWLFTTARQRLQ*AEITPL Trigger: CAGGGGCGTGATCTCGGCTCACTGCAGCCTCTGCCT...AGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | GCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGCGCCTGCCCCGAGATCACGCCCCTaGACTCAGCCTGGGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: ALHHRCGERSSEPTAAPAPRSRP*TQPGQQ Trigger: TTGTTGCCCAGGCTGAGTGCAGGGGCGTGATCTCGG...GGCAGGCGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | GAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCTGCGGCGAACGCCCAGGAGGCAGAGGCTaGAGTGAGCCGAGATCACGC | + |
|
Preference number: 4 (lower is better) Translates to: EEPFWLPALALHHRCGERPGGRG*SEPRSR Trigger: GCGTGATCTCGGCTCACTGCAGCCTCTGCCTCCTGG...GCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | TGTCTGCACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTGGGACCAGCCAGGATCCCGAGGCCTTaGCCCCAGAGTCTGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLHARTRALLPAERLGPARIPRP*PQSLLD Trigger: GTCAAGCAGACTCTGGGGGCAAGGCCTCGGGATCCT...GGCTGGTCCCAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | TGTCTGCACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTGGGACCAGCCCCCACCTGCCCCCAGTaGCATTCCGGTCTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLHARTRALLPAERLGPAPTCPQ*HSGLSS Trigger: ACTGGAAAGACCGGAATGCCACTGGGGGCAGGTGGG...GGCTGGTCCCAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CCA 90 bp | GAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCTGCGGCGAACGCAGTTCGAGATCAGCCTaGGCAACGTGGCGAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EEPFWLPALALHHRCGERSSRSA*ATWRSP Trigger: GGGGCTTCGCCACGTTGCCCAGGCTGATCTCGAACT...GCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CCA 90 bp | GACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCTTTGGCTTCCCGCTCTaGCTCTTCACCACCGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: DQPEEEPFWLPALALHHRFGFPL*LFTTAA Trigger: CGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAA...GCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CCA 90 bp | AACACACGGCAGCCACAGAACACTGTCTGCACGCCAGGACTAGAGCCCTCCTCCTCCCCGCTGAGAGGCTaGGACCAGCCCGAGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTRQPQNTVCTPGLEPSSSPLRG*DQPEEE Trigger: CTCCTCCTCGGGCTGGTCCCAGCCTCTCAGCGGGGA...GGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGGCTGCCGTGTGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CCA 90 bp | ACAGAACACTGTCTGCACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTGGCAGCTGAGGGGGTGTaGGTCGCCAGTGGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TEHCLHARTRALLPAERLAAEGV*VASGSI Trigger: GATGCTGCCACTGGCGACCCACACCCCCTCAGCTGC...CAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | CTTCCCGCTCTGGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCAGAATCGGAAGCCTaGCTGGCCTGGCCTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPALALHHRCGERSSEPTAESEA*LAWPVG Trigger: GCCCACAGGCCAGGCCAGCCAGGCTTCCGATTCTGC...TGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | TCTGGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGCGCCCCCCACGACATGCCATaGCAGGAGTCACACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGSSPPLRRTLFRTHSGAPHDMP*QESHSH Trigger: GTGACTGTGTGACTCCTGTCATGGCATGTCGTGGGG...GGCGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGA 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | GACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCCTTCAACCCCAGATGTaGGCCCTCTGGCCAACCTAC | + |
|
Preference number: 4 (lower is better) Translates to: DQPEEEPFWLPALALHHRLQPQM*ALWPTY Trigger: GTAGGTTGGCCAGAGGGCTCACATCTGGGGTTGAAG...GCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | CCCCCAGTGGCATTCCGGTCTTTCCAGTCTGTCCAACACACGGCAGCCACAGAAGAGGCTCGCTCCAGCTaGCCAGCGGGCATCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPVAFRSFQSVQHTAATEEARSS*PAGITP Trigger: GGGAGTGATGCCCGCTGGTCAGCTGGAGCGAGCCTC...TTCTGTGGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGAATGCCACTGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | GACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCCCACAGAACACTGTCTaGACGCCAGGACTAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DQPEEEPFWLPALALHHRPQNTV*TPGLEP Trigger: GGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGG...GCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR GCA 90 bp | AACACTGTCTGCACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTGGGACGAGCGCAGACAGTGCTaGAGCAGCTTTCGGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NTVCTPGLEPSSPLRGWDERRQC*SSFRGR Trigger: TCTGCCCCGAAAGCTGCTGCAGCACTGTCTGCGCTC...GTCCCAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGTGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | GAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCTGCGGCGAACGCCACCTACAGCAGAGCTaGGTGCATTCCCGCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: EEPFWLPALALHHRCGERHLQQS*VHSRHS Trigger: ACTGTGGCGGGAATGCACCCAGCTCTGCTGTAGGTG...GCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGGGACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACAGCGGCGCCTGCCTaGTCTCTGTGTTTTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EAGTSPRRSRFGFPLWLFTAAPA*SLCFLQ Trigger: CTGCAGAAAACACAGAGACCAGGCAGGCGCCGCTGT...GAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTCCCAGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CCA 90 bp | CCGCTCTGGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGGAGGAGGAGCCGTTTTaGCTTCCCGCTCTGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLWLFTTAAANALQNPQREEEPF*LPALAL Trigger: AAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTC...CCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CCA 90 bp | GACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCGAGGAGGAGCCGTTTTaGCTTCCCGCTCTGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DQPEEEPFWLPALALHHREEEPF*LPALAL Trigger: AAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTC...GCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CCA 90 bp | GCTTCCCGCTCTGGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACCCCACCTGCCCCCAGTaGCATTCCGGTCTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASRSGSSPPLRRTLFRTHPTCPQ*HSGLSS Trigger: ACTGGAAAGACCGGAATGCCACTGGGGGCAGGTGGG...GTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR TCA 90 bp | GAGGCTGGGACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCGGTGGTTTCTGGACCTaGACAGTGACTACGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EAGTSPRRSRFGFPLWLFGGFWT*TVTTWV Trigger: CACCCACGTAGTCACTGTTCAGGTCCAGAAACCACC...GAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTCCCAGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | AACACACGGCAGCCACAGAACACTGTCTGCACGCCAGGACTAGAGCCCTCCTCCGTGTGGTGGGCACTGTaGGCGCAGACAGTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTRQPQNTVCTPGLEPSSVWWAL*AQTVLQ Trigger: CTGCAGCACTGTCTGCGCTCACAGTGCCCACCACAC...GGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGGCTGCCGTGTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | TTGGCTTCCCGCTCTGGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCAGTTCGAGATCAGCCTaGGCAACGTGGCGAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LASRSGSSPPLRRTLFRTSSRSA*ATWRSP Trigger: GGGGCTTCGCCACGTTGCCCAGGCTGATCTCGAACT...GGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CCA 90 bp | AACACTGTCTGCACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTGGGACACAGCGGCGCCTGCCTaGTCTCTGTGTTTTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTVCTPGLEPSSPLRGWDTAAPA*SLCFLQ Trigger: CTGCAGAAAACACAGAGACCAGGCAGGCGCCGCTGT...GTCCCAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR GCA 90 bp | GCTCTGGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGCGAATCGCCCCACGACATaGCATGACAGGAGTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: ALALHHRCGERSSEPTAANRPTT*HDRSHT Trigger: TGTGTGACTCCTGTCATGGCATGTCGTGGGGCGATT...CGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | CTGTCCAACACACGGCAGCCACAGAACACTGTCTGCACGCCAGGACTAGAGCCCTTTGGCTTCCCGCTCTaGCTCTTCACCACCGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSNTRQPQNTVCTPGLEPFGFPL*LFTTAA Trigger: CGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAA...GGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGGCTGCCGTGTGTTGGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CCA 90 bp | GCTCTGGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGCGGCCCCTGCCCTCATGTaGTTTAAGTTTGGTAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALALHHRCGERSSEPTAAAPALM*FKFGSG Trigger: CCCACTACCAAACTTAAACCACATGAGGGCAGGGGC...CGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | ACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCTGTTCCAACTCAGTGCTaGGGGAAGTCACCTACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSPRRSRFGFPLWLFTTAVPTQC*GKSPTR Trigger: CCTGGTAGGTGACTTCCCCCAGCACTGAGTTGGAAC...AGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | TCTGGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGCGCCGTGTTTTCTGCAGGGTaGGTGAGTATAAGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSSPPLRRTLFRTHSGAVFSAG*VSISSQ Trigger: CTGGCTGCTTATACTCACTCACCCTGCAGAAAACAC...GGCGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR GCA 90 bp | ACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCTTACAGCAGAGCTGGGTaGATTCCCGCCACAGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: TSPRRSRFGFPLWLFTTAYSRAG*IPATVL Trigger: TAGTACTGTGGCGGGAATGCACCCAGCTCTGCTGTA...AGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | CCGCTCTGGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGCTCCAGAAAGCAAACTaGCTGGTGATGCTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLWLFTTAAANALQNPQRLQKAN*LVMLMQ Trigger: CTGCATCAGCATCACCAGGCAGTTTGCTTTCTGGAG...CCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | ACACGGGCAGCGCTCAGGTCCCGGCCCAGGAAACTCAGTGGCTTTTATCCCGTTGGGGCTGCAGGCTGGTaGTTTCTGGACCTGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRAALRSRPRKLSGFYPVGAAGW*FLDLNS Trigger: ACTGTTCAGGTCCAGAAACCACCAGCCTGCAGCCCC...AACGGGATAAAAGCCACTGAGTTTCCTGGGCCGGGACCTGAGCGCTGCCCGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | ACCTGCCCCCAGTGGCATTCCGGTCTTTCCAGTCTGTCCAACACACGGCAGCCAGGTGTGGGTCGCCAGTaGCAGCATCAGGCTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TCPQWHSGLSSLSNTRQPGVGRQ*QHQALK Trigger: TTTCAGAGCCTGATGCTGCCACTGGCGACCCACACC...TGGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGAATGCCACTGGGGGCAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | ATCCCGTTTCCTTCAACCCCAGATGTGAGCCCTCTGGCCAACCTACCTAACCCACTGGCCTGTGGGCGGTaGTGTGGTGGGCACTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IPFPSTPDVSPLANLPNPLACGR*CGGHCE Trigger: CTCACAGTGCCCACCACACCACCGCCCACAGGCCAG...TGGGTTAGGTAGGTTGGCCAGAGGGCTCACATCTGGGGTTGAAGGAAACGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | CTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGCGCCTGCCTCAGGGTAGCTCACTGTaGTTAGAGCTTATGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTTAAANALQNPQRRLPQGSSL*LELMQG Trigger: CCCTTGCATAAGCTCTAACCACAGTGAGCTACCCTG...AGGCAGGCGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | GGACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGTCCGTTTATATTCAGTaGGCAACAGGCAGACTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPARGGAVLASRSGSSPPSVYIQ*ATGRLV Trigger: GACGAGTCTGCCTGTTGCTCACTGAATATAAACGGA...CGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | ACAGAACACTGTCTGCACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTGAGTACAGCAGGTAACTaGGACCCTCCACCTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TEHCLHARTRALLPAERLSTAGN*DPPPTA Trigger: TGCTGTAGGTGGAGGGTCTCAGTTACCTGCTGTACT...CAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | GCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGCGCCTGCCGGTCTCTGTGTTTTCTaGAGGGTGAGTGAGTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALHHRCGERSSEPTAAPAGLCVF*RVSEYK Trigger: CTTATACTCACTCACCCTGCAGAAAACACAGAGACC...GGCAGGCGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR GCA 90 bp | TCCGGTCTTTCCAGTCTGTCCAACACACGGCAGCCACAGAACACTGTCTGCACGTGTGAGCGCAGACAGTaGTGCAGCAGCTTTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGLSSLSNTRQPQNTVCTCERRQ*CSSFRG Trigger: GCCCCGAAAGCTGCTGCAGCACTGTCTGCGCTCACA...CGTGCAGACAGTGTTCTGTGGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | ACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCTTTTGTTCCAACTCAGTaGTGGGGGAAGTCACCTACC | + |
|
Preference number: 4 (lower is better) Translates to: TSPRRSRFGFPLWLFTTAFVPTQ*WGKSPT Trigger: GGTAGGTGACTTCCCCCAGCACTGAGTTGGAACAAA...AGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | GCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGCGCCTGCCCACACAGAAAGCTTCTaGTTTGTTCCAACTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALHHRCGERSSEPTAAPAHTESF*FVPTQC Trigger: GCACTGAGTTGGAACAAAGCAGAAGCTTTCTGTGTG...GGCAGGCGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | CACCTGCCCCCAGTGGCATTCCGGTCTTTCCAGTCTGTCCAACACACGGCAGCCGTGTTTTCTGCAGGGTaGGTGAGTATAAGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLPPVAFRSFQSVQHTAAVFSAG*VSISSQ Trigger: CTGGCTGCTTATACTCACTCACCCTGCAGAAAACAC...GGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGAATGCCACTGGGGGCAGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR TCA 90 bp | GAGGAGGATGGGTCTCCAGGAAAGGGCAGAATCGGAAGCCTGGCTGGCCTGGCCAGACTGTGTTACAGCTaGAACAGGGTAGCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: EEDGSPGKGRIGSLAGLARLCYS*NRVAHC Trigger: ACAGTGAGCTACCCTGTTTCAGCTGTAACACAGTCT...GGCCAGGCCAGCCAGGCTTCCGATTCTGCCCTTTCCTGGAGACCCATCCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | TGGCATTCCGGTCTTTCCAGTCTGTCCAACACACGGCAGCCACAGAACACTGTCGCTCTTCACCACCGCTaGGGCGAACGCTCTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WHSGLSSLSNTRQPQNTVALHHR*GERSSE Trigger: TTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGC...GACAGTGTTCTGTGGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGAATGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CCA 90 bp | TGGCATTCCGGTCTTTCCAGTCTGTCCAACACACGGCAGCCACAGAACACTGTCTTGGGGGCTGCAGGCTaGTGGTTTCTGGACCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WHSGLSSLSNTRQPQNTVLGAAG*WFLDLN Trigger: GTTCAGGTCCAGAAACCACCAGCCTGCAGCCCCCAA...GACAGTGTTCTGTGGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGAATGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | CCCCCAGTGGCATTCCGGTCTTTCCAGTCTGTCCAACACACGGCAGCCACAGAACTTGCCCCCAGAGTCTaGTTGACAGTTCTGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPVAFRSFQSVQHTAATELAPRV*LTVLEK Trigger: CTTTTCCAGAACTGTCAAGCAGACTCTGGGGGCAAG...TTCTGTGGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGAATGCCACTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | AACACACGGCAGCCACAGAACACTGTCTGCACGCCAGGACTAGAGCCCTCCTCCGCCCAGGAAACTCAGTaGCTTTTATCCCGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTRQPQNTVCTPGLEPSSAQETQ*LLSRFL Trigger: AAGGAAACGGGATAAAAGCCACTGAGTTTCCTGGGC...GGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGGCTGCCGTGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR CAA 72 bp | GTGCTGGGGGAAGTCACCTACCAGGGCAAGATGGTGTaGCTAGTTCATCACCACCAGCCTCACCAAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLGEVTYQGKMV*LVHHHQPHQSQ Trigger: TTGGCTTTGGTGAGGCTGGTGGTGATGAACTAGCAACACCATCTTGCCCTGGTAGGTGACTTCCCCCAGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | TTGGCTTCCCGCTCTGGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCAGTACTACACAGAAATaGGACTGCTTTCACCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: LASRSGSSPPLRRTLFRTSTTQK*DCFHLH Trigger: GTGTAGGTGAAAGCAGTCTCATTTCTGTGTAGTACT...GGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | CTGTCCAACACACGGCAGCCACAGAACACTGTCTGCACGCCAGGACTAGAGCCCTGCAGAAATCCATCCTaGAACGAAGGGCTTAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LSNTRQPQNTVCTPGLEPCRNPS*NEGLKP Trigger: AGGTTTAAGCCCTTCGTTTCAGGATGGATTTCTGCA...GGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGGCTGCCGTGTGTTGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | GGAGCCATCACACTGGCCCAGTCCCAGAGCTTAGTACCTCCAACTGGTTGTTTTACTCACTGCAACCTCTaGCTTCTGGGTTCCAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GAITLAQSQSLVPPTGCFTHCNL*LLGSSG Trigger: ACCGCTGGAACCCAGAAGGCAGAGGTTGCAGTGAGT...AAAACAACCAGTTGGAGGTACTAAGCTCTGGGACTGGGCCAGTGTGATGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR GCA 90 bp | AACACACGGCAGCCACAGAACACTGTCTGCACGCCAGGACTAGAGCCCTCCTCCTTACGAATAAATCACTaGAACCCAGAATCGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NTRQPQNTVCTPGLEPSSLRINH*NPESPH Trigger: GTGGGGCGATTCTGGGTTGCAGTGATTTATTCGTAA...GGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGGCTGCCGTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | ACCCACCTGCCCCCAGTGGCATTCCGGTCTTTCCAGTCTGTCCAACACACGGCAGGTCTCTGTGTTTTCTaGAGGGTGAGTGAGTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: THLPPVAFRSFQSVQHTAGLCVF*RVSEYK Trigger: CTTATACTCACTCACCCTGCAGAAAACACAGAGACC...TGCCGTGTGTTGGACAGACTGGAAAGACCGGAATGCCACTGGGGGCAGGTGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR GCA 90 bp | ACTCCGTTTATATTCAGTGAGCAACAGGCAGACTCGTCAGGCCAGACAGCAGCACCACAGAACACTGTCTaGACGCCAGGACTAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TPFIFSEQQADSSGQTAAPQNTV*TPGLEP Trigger: GGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGG...TGCTGCTGTCTGGCCTGACGAGTCTGCCTGTTGCTCACTGAATATAAACGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | TGGCATTCCGGTCTTTCCAGTCTGTCCAACACACGGCAGCCACAGAACACTGTCGGGGACGTGAGAATGTaGCCAAGAGCTAGGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WHSGLSSLSNTRQPQNTVGDVRM*PRARRK Trigger: CTTTCTCCTAGCTCTTGGGCACATTCTCACGTCCCC...GACAGTGTTCTGTGGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGAATGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | GGAGCCATCACACTGGCCCAGTCCCAGAGCTTAGTACCTCCAACTGGTTGTTTTCAGGCTGGAGTGCAGTaGCATGATCTCCACTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GAITLAQSQSLVPPTGCFQAGVQ*HDLHSL Trigger: CAGTGAGTGGAGATCATGCCACTGCACTCCAGCCTG...AAAACAACCAGTTGGAGGTACTAAGCTCTGGGACTGGGCCAGTGTGATGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCCATCACACTGGCCCAGTCCCAGAGCTTAGTACCTCCAACTGGTTGTTTTCCGTGTGCACTATCCTaGCTCACTGCAGCCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GAITLAQSQSLVPPTGCFPCALS*LTAALN Trigger: GTTCAAGGCTGCAGTGAGCCAGGATAGTGCACACGG...AAAACAACCAGTTGGAGGTACTAAGCTCTGGGACTGGGCCAGTGTGATGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| 3UTR CAA 72 bp | CCGGCCATACAGGTGGTTTCACTCAGAGTTCAGCCATaGTCATCTGTGAGGGGGACACGTGGTTGGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PAIQVVSLRVQP*SSVRGTRGWLC Trigger: ACAAAGCCAACCACGTGTCCCCCTCACAGATGACAATGGCTGAACTCTGAGTGAAACCACCTGTATGGCCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTTTGTTGTGTGCTAACTTTGATGGTGACCAGGGGGTTCACTGAGCTCTGTCCTCCCAGGCTGGAGTaGAGTGGCATGATCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: WLCCVLTLMVTRGFTELCPPRLE*SGMIST Trigger: AGTGGAGATCATGCCACTGCACTCCAGCCTGGGAGG...ACAGAGCTCAGTGAACCCCCTGGTCACCATCAAAGTTAGCACACAACAAAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTTTGTTGTGTGCTAACTTTGATGGTGACCAGGGGGTTCACTGAGCTCTGTGTAGAGACAGGGTCTTaGTATGCTCCCCCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WLCCVLTLMVTRGFTELCVETGS*YAPPGW Trigger: CCAGCCTGGGGGAGCATAGCAAGACCCTGTCTCTAC...ACAGAGCTCAGTGAACCCCCTGGTCACCATCAAAGTTAGCACACAACAAAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| 3UTR CAA 72 bp | GCCATTGTCATCTGTGAGGGGGACACGTGGTTGGCTTaGTTGTGTGCTAACTTTGATGGTGACCAGGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AIVICEGDTWLA*LCANFDGDQGV Trigger: AACCCCCTGGTCACCATCAAAGTTAGCACACAACAAAGCCAACCACGTGTCCCCCTCACAGATGACAATGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGCCATTGTCATCTGTGAGGGGGACACGTGGTTGGCTTTGTTGTGTGCTTGTGAGGGGGACACGTaGTTGGCTTTGTTGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSAIVICEGDTWLALLCACEGDT*LALLCA Trigger: AGCACACAACAAAGCCAACCACGTGTCCCCCTCACA...AGCACACAACAAAGCCAACCACGTGTCCCCCTCACAGATGACAATGGCTGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTTTGTTGTGTGCTAACTTTGATGGTGACCAGGGGGTTCACTGAGCTCTGTCTCAACCTCCCAAAGTaGTGGGATTACAGGCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WLCCVLTLMVTRGFTELCLNLPK*WDYRRE Trigger: CTCACGCCTGTAATCCCAGCACTTTGGGAGGTTGAG...ACAGAGCTCAGTGAACCCCCTGGTCACCATCAAAGTTAGCACACAACAAAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| 3UTR CAA 72 bp | ATTGTCATCTGTGAGGGGGACACGTGGTTGGCTTTGTaGTGTGCTAACTTTGATGGTGACCAGGGGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IVICEGDTWLAL*CANFDGDQGVH Trigger: GTGAACCCCCTGGTCACCATCAAAGTTAGCACACAACAAAGCCAACCACGTGTCCCCCTCACAGATGACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR GCA 90 bp | TCCGGTCTTTCCAGTCTGTCCAACACACGGCAGCCACAGAACACTGTCTGCACGAGACCTAAGAAGCCCTaGTTTGACTCCGTTTATATT | + |
|
Preference number: 4 (lower is better) Translates to: SGLSSLSNTRQPQNTVCTRPKKP*FDSVYI Trigger: AATATAAACGGAGTCAAAGCAGGGCTTCTTAGGTCT...CGTGCAGACAGTGTTCTGTGGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | AGTGGCATTCCGGTCTTTCCAGTCTGTCCAACACACGGCAGCCACAGAACACTGAGTAAAGTCGGAGACTaGATTGGTTCCTTCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGIPVFPVCPTHGSHRTLSKVGD*IGSFIA Trigger: AGCAATGAAGGAACCAATGCAGTCTCCGACTTTACT...CAGTGTTCTGTGGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGAATGCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR CAA 72 bp | AGTTCAGCCATTGTCATCTGTGAGGGGGACACGTGGTaGGCTTTGTTGTGTGCTAACTTTGATGGTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSAIVICEGDTW*ALLCANFDGDQ Trigger: CTGGTCACCATCAAAGTTAGCACACAACAAAGCCAACCACGTGTCCCCCTCACAGATGACAATGGCTGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCAGCCATTGTCATCTGTGAGGGGGACACGTGGTTGGCTTTGTTGTGTGCTAAAACGGAATTCCCTTaGCCATCGTGCTTCGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSAIVICEGDTWLALLCAKTEFP*PSCFDD Trigger: ATCATCGAAGCACGATGGTCAAGGGAATTCCGTTTT...AGCACACAACAAAGCCAACCACGTGTCCCCCTCACAGATGACAATGGCTGAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTAAAACAAAAACGGAATTCCCTTGACCATCGTGCTTCGATGATCTCAGACGGGGCTACAGGTGTGTaGCACCACACGAGGCTAATT | + |
|
Preference number: 4 (lower is better) Translates to: ALKQKRNSLDHRASMISDGATGV*HHTRLI Trigger: AATTAGCCTCGTGTGGTGGCACACACCTGTAGCCCC...GTCTGAGATCATCGAAGCACGATGGTCAAGGGAATTCCGTTTTTGTTTTAGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| 3UTR CAA 72 bp | CACAGGACAAAGAGGTCAGACCTAAGAAGCCCTGCTTaGACTCCGTTTATATTCAGTGAGCAACAGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HRTKRSDLRSPA*TPFIFSEQQAD Trigger: GTCTGCCTGTTGCTCACTGAATATAAACGGAGTCAAAGCAGGGCTTCTTAGGTCTGACCTCTTTGTCCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | GCTCTAAAACAAAAACGGAATTCCCTTGACCATCGTGCTTCGATGATCTCAGACGAACTTCTGGACTTGTaGTCCTCCTACCTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALKQKRNSLDHRASMISDELLDL*SSYLSL Trigger: GAGGCTGAGGTAGGAGGATCACAAGTCCAGAAGTTC...GTCTGAGATCATCGAAGCACGATGGTCAAGGGAATTCCGTTTTTGTTTTAGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR GCA 90 bp | CCAAATGTAAGACTGAGAGATGACTGCTTCCAAGGTAGCATCAACAAAGATTTTGACAGGGTCTTGCTATaGTCCCCCAGGCTGGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PNVRLRDDCFQGSINKDFDRVLL*SPRLVS Trigger: CGAGACCAGCCTGGGGGAGCATAGCAAGACCCTGTC...AAAATCTTTGTTGATGCTACCTTGGAAGCAGTCATCTCTCAGTCTTACATTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTAAAACAAAAACGGAATTCCCTTGACCATCGTGCTTCGATGATCTCAGACATGATCTCCACTCACTaGAACCTCTGCCTTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALKQKRNSLDHRASMISDMISTH*NLCLLG Trigger: ACCCAGAAGGCAGAGGTTGCAGTGAGTGGAGATCAT...GTCTGAGATCATCGAAGCACGATGGTCAAGGGAATTCCGTTTTTGTTTTAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR GCA 90 bp | ATCGTATTCTTACATAGAAGGATCACCAAACCGAATGCTGTTTCCACACAGAAAGCTCTTCACCACCGCTaGGGCGAACGCTCTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IVFLHRRITKPNAVSTQKALHHR*GERSSE Trigger: TTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGC...TTTCTGTGTGGAAACAGCATTCGGTTTGGTGATCCTTCTATGTAAGAATACGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | CCAAATGTAAGACTGAGAGATGACTGCTTCCAAGGTAGCATCAACAAAGATTTTACTATCCTGGCTCACTaGAGCCTTGAACTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PNVRLRDDCFQGSINKDFTILAH*SLELLG Trigger: GCCCAGGAGTTCAAGGCTGCAGTGAGCCAGGATAGT...AAAATCTTTGTTGATGCTACCTTGGAAGCAGTCATCTCTCAGTCTTACATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR CCA 90 bp | CCAAATGTAAGACTGAGAGATGACTGCTTCCAAGGTAGCATCAACAAAGATTTTGCCCGGCCATACAGGTaGTTTCACTCAGAGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PNVRLRDDCFQGSINKDFARPYR*FHSEFS Trigger: GCTGAACTCTGAGTGAAACCACCTGTATGGCCGGGC...AAAATCTTTGTTGATGCTACCTTGGAAGCAGTCATCTCTCAGTCTTACATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| 3UTR CAA 72 bp | AAGCCAGTAAAGTCGGAGACTGCATTGGTTCCTTCATaGCTGAGAGTTACTAGAACAACAGTCCTGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KPVKSETALVPS*LRVTRTTVLSG Trigger: TCCAGACAGGACTGTTGTTCTAGTAACTCTCAGCAATGAAGGAACCAATGCAGTCTCCGACTTTACTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | CCAAATGTAAGACTGAGAGATGACTGCTTCCAAGGTAGCATCAACAAAGATTTTTTAAGCGTGGAAAGGTaGAACATCAAGGCGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PNVRLRDDCFQGSINKDFLSVER*NIKAAG Trigger: GCCTGCCGCCTTGATGTTTCACCTTTCCACGCTTAA...AAAATCTTTGTTGATGCTACCTTGGAAGCAGTCATCTCTCAGTCTTACATTTGG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTAAAACAAAAACGGAATTCCCTTGACCATCGTGCTTCGATGATCTCAGACAGCTCTGTAAGGTGCTaGAACTCCACTGATGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALKQKRNSLDHRASMISDSSVRC*NSTDVC Trigger: ACAAACATCAGTGGAGTTTCAGCACCTTACAGAGCT...GTCTGAGATCATCGAAGCACGATGGTCAAGGGAATTCCGTTTTTGTTTTAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR TCA 90 bp | ACACAGAAAGCTTCTGCTTTGTTCCAACTCAGTGCTGGGGGAAGTCACCTACCAATGCAAGGGGACTGGTaGTTTTATACCCATTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: TQKASALFQLSAGGSHLPMQGDW*FYTHYK Trigger: TTTATAATGGGTATAAAATCACCAGTCCCCTTGCAT...TGGTAGGTGACTTCCCCCAGCACTGAGTTGGAACAAAGCAGAAGCTTTCTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR GCA 90 bp | GCTCTAAAACAAAAACGGAATTCCCTTGACCATCGTGCTTCGATGATCTCAGACAGACTGAGAGATGACTaGTTCCAAGGTAGCATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALKQKRNSLDHRASMISDRLRDD*FQGSIN Trigger: GTTGATGCTACCTTGGAAGCAGTCATCTCTCAGTCT...GTCTGAGATCATCGAAGCACGATGGTCAAGGGAATTCCGTTTTTGTTTTAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR GCA 90 bp | CCAAATGTAAGACTGAGAGATGACTGCTTCCAAGGTAGCATCAACAAAGATTTTTCTGAAACAGGGTCTTaGTCTTGCTCAGGCCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PNVRLRDDCFQGSINKDFSETGS*SCSGRV Trigger: CACACGGCCTGAGCAAGAGCAAGACCCTGTTTCAGA...AAAATCTTTGTTGATGCTACCTTGGAAGCAGTCATCTCTCAGTCTTACATTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR CCA 90 bp | CCAAATGTAAGACTGAGAGATGACTGCTTCCAAGGTAGCATCAACAAAGATTTTAGTCTACCAAGTAGCTaGGGCTACAGGTGTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PNVRLRDDCFQGSINKDFSLPSS*GYRCVP Trigger: TGGCACACACCTGTAGCCCCAGCTACTTGGTAGACT...AAAATCTTTGTTGATGCTACCTTGGAAGCAGTCATCTCTCAGTCTTACATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| 3UTR CAA 72 bp | AGAGCGAAACTCAAGCCAGTAAAGTCGGAGACTGCATaGGTTCCTTCATTGCTGAGAGTTACTAGAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: RAKLKPVKSETA*VPSLLRVTRTT Trigger: TGTTGTTCTAGTAACTCTCAGCAATGAAGGAACCAATGCAGTCTCCGACTTTACTGGCTTGAGTTTCGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CCA 90 bp | ATCGTATTCTTACATAGAAGGATCACCAAACCGAATGCTGTTTCCACACAGAAAACGAAGGACAGTAGCTaGGAAGTAGTGGCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IVFLHRRITKPNAVSTQKTKDSS*EVVAAE Trigger: TTCTGCAGCCACTACTTCCCAGCTACTGTCCTTCGT...TTTCTGTGTGGAAACAGCATTCGGTTTGGTGATCCTTCTATGTAAGAATACGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| 3UTR CAA 72 bp | TTAAAAATGAAGCCCCTGCCCTCATGTGGTTTAAGTTaGGTAGTGGGAGAGATGTCCCAAACTAAAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKMKPLPSCGLS*VVGEMSQTKDA Trigger: TGCATCTTTAGTTTGGGACATCTCTCCCACTACCAAACTTAAACCACATGAGGGCAGGGGCTTCATTTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR TCA 90 bp | CCAAATGTAAGACTGAGAGATGACTGCTTCCAAGGTAGCATCAACAAAGATTTTACCATCGTGCTTCGATaGTCTCAGACTATTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PNVRLRDDCFQGSINKDFTIVLR*SQTILK Trigger: CTTCAGAATAGTCTGAGATCATCGAAGCACGATGGT...AAAATCTTTGTTGATGCTACCTTGGAAGCAGTCATCTCTCAGTCTTACATTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTAAAACAAAAACGGAATTCCCTTGACCATCGTGCTTCGATGATCTCAGACAGAAAACTTGATTCTTaGTCTCCCATCTGTCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALKQKRNSLDHRASMISDRKLDS*SPICLK Trigger: CTTTAGACAGATGGGAGACCAAGAATCAAGTTTTCT...GTCTGAGATCATCGAAGCACGATGGTCAAGGGAATTCCGTTTTTGTTTTAGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGCGCCTGCCTCCTGTGCTGGGGCCTTaGGGGGCTGCAGGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LFTTAAANALQNPQRRLPPVLGP*GAAGWW Trigger: CCACCAGCCTGCAGCCCCCAAAGGCCCCAGCACAGG...AGGCAGGCGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CAA 90 bp | TGTCTGCACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTGGGACCAGCCGCCCCCAGAGTCTGCTaGACAGTTCTGGAAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CLHARTRALLPAERLGPAAPRVC*TVLEKA Trigger: AGCCTTTTCCAGAACTGTCAAGCAGACTCTGGGGGC...GGCTGGTCCCAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS GCA 90 bp | TCACTGCATCCCCAAAGAGGGCGAGGCTCCTATATAAGGACGGACTaGAGCAGGAGCCAGTCCAGAACGCGGCCCGAGGCGAACAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLHPQRGRGSYIRTD*SRSQSRTRPEANSS Trigger: GCTGCTGTTCGCCTCGGGCCGCGTTCTGGACTGGCTCCTGCTGCAGTCCGTCCTTATATAGGAGCCTCGCCCTCTTTGGGGATGCAGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000631806.1 |
||
| CDS-3UTR CAA 90 bp | ACGGCAGCCACAGAACACTGTCTGCACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGGTGAGCCATCCCTaGAGTTCGAGATCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TAATEHCLHARTRALLPAEVSHP*SSRSAW Trigger: CCAGGCTGATCTCGAACTCAAGGGATGGCTCACCTC...AGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGGCTGCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS GCA 90 bp | CCTTGGAGTCACTCAGAAGTACTGCTAACCAGGGACCGCTCCTCCTaGGACCACAGCCCCGCTGAGGCGCGTGAGTGCGTTTCTCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PWSHSEVLLTRDRSS*DHSPAEARECVSQS Trigger: ACTCTGAGAAACGCACTCACGCGCCTCAGCGGGGCTGTGGTCGCAGGAGGAGCGGTCCCTGGTTAGCAGTACTTCTGAGTGACTCCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000631806.1 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCCCCCCGTTCCCATTATaGCTGAAGTGCAGTTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: DQPEEEPFWLPALALHHRPPFPL*LKCSST Trigger: GGTAGAACTGCACTTCAGCAATAATGGGAACGGGGG...GCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CAA 90 bp | AACACTGTCTGCACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTGGGACTGTAATCCCAGCACTTaGGAGGCCGAGGTGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NTVCTPGLEPSSPLRGWDCNPST*EAEVSH Trigger: ATGGCTCACCTCGGCCTCCAAAGTGCTGGGATTACA...GTCCCAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACAGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CAA 90 bp | TGTCTGCACGCCAGGACTAGAGCCCTCCTCCCCGCTGAGAGGCTGGGACCAGCCAAGTCGGAGACTGCATaGGTTCCTTCATTGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CLHARTRALLPAERLGPAKSETA*VPSLLR Trigger: TCTCAGCAATGAAGGAACCAATGCAGTCTCCGACTT...GGCTGGTCCCAGCCTCTCAGCGGGGAGGAGGGCTCTAGTCCTGGCGTGCAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CAA 90 bp | CTAACCCACCTGCCCCCAGTGGCATTCCGGTCTTTCCAGTCTGTCCAACACACGTGTAATCCCAGCACTTaGGAGGCCGAGGTGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LTHLPPVAFRSFQSVQHTCNPST*EAEVSH Trigger: ATGGCTCACCTCGGCCTCCAAAGTGCTGGGATTACA...CGTGTGTTGGACAGACTGGAAAGACCGGAATGCCACTGGGGGCAGGTGGGTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCCGAGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCTCATGTGGTTTAAGTTaGGTAGTGGGAGAGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DQPEEEPFWLPALALHHRSCGLS*VVGEMS Trigger: GGACATCTCTCCCACTACCAAACTTAAACCACATGA...GCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCTCGGGCTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CAA 90 bp | TCTGGCTCTTCACCACCGCTGCGGCGAACGCTCTTCAGAACCCACAGCGGCGCCCTAAGAAGCCCTGCTTaGACTCCGTTTATATTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SGSSPPLRRTLFRTHSGALRSPA*TPFIFS Trigger: ACTGAATATAAACGGAGTCAAAGCAGGGCTTCTTAG...GGCGCCGCTGTGGGTTCTGAAGAGCGTTCGCCGCAGCGGTGGTGAAGAGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CAA 90 bp | AGTGGCATTCCGGTCTTTCCAGTCTGTCCAACACACGGCAGCCACAGAACACTGGAGGTGAGCCATCCCTaGAGTTCGAGATCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGIPVFPVCPTHGSHRTLEVSHP*SSRSAW Trigger: CCAGGCTGATCTCGAACTCAAGGGATGGCTCACCTC...CAGTGTTCTGTGGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGAATGCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CAA 90 bp | AGGAGGAGCCGTTTTGGCTTCCCGCTCTGGCTCTTCACCACCGCTGCGGCGAACGCATTGGTTCCTTCATaGCTGAGAGTTACTAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: RRSRFGFPLWLFTTAAANALVPS*LRVTRT Trigger: TGTTCTAGTAACTCTCAGCAATGAAGGAACCAATGC...GTTCGCCGCAGCGGTGGTGAAGAGCCAGAGCGGGAAGCCAAAACGGCTCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CAA 90 bp | CAGTGGCATTCCGGTCTTTCCAGTCTGTCCAACACACGGCAGCCACAGAACACTCCCCCGTTCCCATTATaGCTGAAGTGCAGTTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: QWHSGLSSLSNTRQPQNTPPFPL*LKCSST Trigger: GGTAGAACTGCACTTCAGCAATAATGGGAACGGGGG...AGTGTTCTGTGGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGAATGCCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540159.3 ENST00000633835.1 |
||
| CDS-3UTR CAA 90 bp | GGAGCCATCACACTGGCCCAGTCCCAGAGCTTAGTACCTCCAACTGGTTGTTTTCCCCCGTTCCCATTATaGCTGAAGTGCAGTTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: GAITLAQSQSLVPPTGCFPPFPL*LKCSST Trigger: GGTAGAACTGCACTTCAGCAATAATGGGAACGGGGG...AAAACAACCAGTTGGAGGTACTAAGCTCTGGGACTGGGCCAGTGTGATGGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS TCA 90 bp | TTACGAATAAATCACTGCAACCCAGAATCGCCCCACGACATGCCATaGCAGGAGTCACACAGTCACATCACCTACCCCAATCCGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRINHCNPESPHDMP*QESHSHITYPNPMA Trigger: GGCCATCGGATTGGGGTAGGTGATGTGACTGTGTGACTCCTGTCATGGCATGTCGTGGGGCGATTCTGGGTTGCAGTGATTTATTCGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTTTGTTGTGTGCTAACTTTGATGGTGACCAGGGGGTTCACTGAGCTCTGTGAGGGGGACACGTGGTaGGCTTTGTTGTGTGCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: WLCCVLTLMVTRGFTELCEGDTW*ALLCAN Trigger: GTTAGCACACAACAAAGCCAACCACGTGTCCCCCTC...ACAGAGCTCAGTGAACCCCCTGGTCACCATCAAAGTTAGCACACAACAAAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368636.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCAGCCATTGTCATCTGTGAGGGGGACACGTGGTTGGCTTTGTTGTGTGCTTGTTGTGTGCTAACTTaGATGGTGACCAGGGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: SSAIVICEGDTWLALLCACCVLT*MVTRGF Trigger: GAACCCCCTGGTCACCATCAAAGTTAGCACACAACA...AGCACACAACAAAGCCAACCACGTGTCCCCCTCACAGATGACAATGGCTGAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| CDS-3UTR CAA 90 bp | TTACAGCTGAAACAGGGTAGCTCACTGTGGTTAGAGCTTATGCAAGGGGACTGGCAGGGCAAGATGGTGTaGCTAGTTCATCACCACCAG | + |
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Preference number: 5 (lower is better) Translates to: LQLKQGSSLWLELMQGDWQGKMV*LVHHHQ Trigger: CTGGTGGTGATGAACTAGCAACACCATCTTGCCCTG...CCAGTCCCCTTGCATAAGCTCTAACCACAGTGAGCTACCCTGTTTCAGCTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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| CDS-3UTR CAA 90 bp | TGGCTTTGTTGTGTGCTAACTTTGATGGTGACCAGGGGGTTCACTGAGCTCTGTGACACGTGGTTGGCTTaGTTGTGTGCTAACTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: WLCCVLTLMVTRGFTELCDTWLA*LCANFD Trigger: ATCAAAGTTAGCACACAACAAAGCCAACCACGTGTC...ACAGAGCTCAGTGAACCCCCTGGTCACCATCAAAGTTAGCACACAACAAAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| CDS-3UTR CAA 90 bp | TGGCTTTGTTGTGTGCTAACTTTGATGGTGACCAGGGGGTTCACTGAGCTCTGTACACCTCCAGAAAACTaGATTCTTGGTCTCCCATCT | + |
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Preference number: 5 (lower is better) Translates to: WLCCVLTLMVTRGFTELCTPPEN*ILGLPS Trigger: AGATGGGAGACCAAGAATCAAGTTTTCTGGAGGTGT...ACAGAGCTCAGTGAACCCCCTGGTCACCATCAAAGTTAGCACACAACAAAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| CDS-3UTR CAA 90 bp | CCAAATGTAAGACTGAGAGATGACTGCTTCCAAGGTAGCATCAACAAAGATTTTTGTAGAGACAGGGTCTaGCTATGCTCCCCCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: PNVRLRDDCFQGSINKDFCRDRV*LCSPRL Trigger: CAGCCTGGGGGAGCATAGCAAGACCCTGTCTCTACA...AAAATCTTTGTTGATGCTACCTTGGAAGCAGTCATCTCTCAGTCTTACATTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| CDS-3UTR CAA 90 bp | CCAAATGTAAGACTGAGAGATGACTGCTTCCAAGGTAGCATCAACAAAGATTTTCTCAGAGTTCAGCCATaGTCATCTGTGAGGGGGACA | + |
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Preference number: 5 (lower is better) Translates to: PNVRLRDDCFQGSINKDFLRVQP*SSVRGT Trigger: TGTCCCCCTCACAGATGACAATGGCTGAACTCTGAG...AAAATCTTTGTTGATGCTACCTTGGAAGCAGTCATCTCTCAGTCTTACATTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| CDS-3UTR CAA 90 bp | CCAAATGTAAGACTGAGAGATGACTGCTTCCAAGGTAGCATCAACAAAGATTTTACGTGGTTGGCTTTGTaGTGTGCTAACTTTGATGGT | + |
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Preference number: 5 (lower is better) Translates to: PNVRLRDDCFQGSINKDFTWLAL*CANFDG Trigger: ACCATCAAAGTTAGCACACAACAAAGCCAACCACGT...AAAATCTTTGTTGATGCTACCTTGGAAGCAGTCATCTCTCAGTCTTACATTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368636.8 |
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| CDS GCA 72 bp | CCCCAAAGAGGGCGAGGCTCCTATATAAGGACGGACTaGAGCAGGAGCCAGTCCAGAACGCGGCCCGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: PQRGRGSYIRTD*SRSQSRTRPEA Trigger: CGCCTCGGGCCGCGTTCTGGACTGGCTCCTGCTGCAGTCCGTCCTTATATAGGAGCCTCGCCCTCTTTGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000631806.1 |
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| CDS GCA 72 bp | TCCTCCTGCGACCACAGCCCCGCTGAGGCGCGTGAGTaGGTTTCTCAGAGTGGGGTTTGTGGCTGTTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: SSCDHSPAEARE*VSQSGVCGCSA Trigger: AGCGGAACAGCCACAAACCCCACTCTGAGAAACGCACTCACGCGCCTCAGCGGGGCTGTGGTCGCAGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000631806.1 |
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| CDS GCA 72 bp | CACTCAGAAGTACTGCTAACCAGGGACCGCTCCTCCTaGGACCACAGCCCCGCTGAGGCGCGTGAGTGCGTT | + |
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Preference number: 6 (lower is better) Translates to: HSEVLLTRDRSS*DHSPAEARECV Trigger: AACGCACTCACGCGCCTCAGCGGGGCTGTGGTCGCAGGAGGAGCGGTCCCTGGTTAGCAGTACTTCTGAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000631806.1 |
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| CDS CCA 72 bp | GCCGAGGTGAGCCATCCCTTGAGTTCGAGATCAGCCTaGGCAACGTGGCGAAGCCCCGTCTCCCAATCCGAT | + |
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Preference number: 6 (lower is better) Translates to: AEVSHPLSSRSA*ATWRSPVSQSD Trigger: ATCGGATTGGGAGACGGGGCTTCGCCACGTTGCCCAGGCTGATCTCGAACTCAAGGGATGGCTCACCTCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000633835.1 |
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| CDS CAA 90 bp | GCTCTCAAGGGCACGCGACCTTTGACCACTGTCGGCCACTCTACCTaGGAGTCACTCAGAAGTACTGCTAACCAGGGACCGCTCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: ALKGTRPLTTVGHST*ESLRSTANQGPLLL Trigger: CAGGAGGAGCGGTCCCTGGTTAGCAGTACTTCTGAGTGACTCCAAGGTAGAGTGGCCGACAGTGGTCAAAGGTCGCGTGCCCTTGAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000631806.1 |
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| CDS CAA 72 bp | GGCACGCGACCTTTGACCACTGTCGGCCACTCTACCTaGGAGTCACTCAGAAGTACTGCTAACCAGGGACCG | + |
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Preference number: 6 (lower is better) Translates to: GTRPLTTVGHST*ESLRSTANQGP Trigger: CGGTCCCTGGTTAGCAGTACTTCTGAGTGACTCCAAGGTAGAGTGGCCGACAGTGGTCAAAGGTCGCGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000631806.1 |
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| CDS CAA 72 bp | GTGGGGTTTGTGGCTGTTCCGCTGCCTACTGATGACTaGAACATGGCTCCCCACAGACTAAGTCCCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: VGFVAVPLPTDD*NMAPHRLSPRS Trigger: TGACCTGGGACTTAGTCTGTGGGGAGCCATGTTCAAGTCATCAGTAGGCAGCGGAACAGCCACAAACCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000631806.1 |
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| CDS CAA 90 bp | TTTCTCAGAGTGGGGTTTGTGGCTGTTCCGCTGCCTACTGATGACTaGAACATGGCTCCCCACAGACTAAGTCCCAGGTCACTGCATCCC | + |
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Preference number: 6 (lower is better) Translates to: FLRVGFVAVPLPTDD*NMAPHRLSPRSLHP Trigger: GGGATGCAGTGACCTGGGACTTAGTCTGTGGGGAGCCATGTTCAAGTCATCAGTAGGCAGCGGAACAGCCACAAACCCCACTCTGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000631806.1 |
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| CDS TCA 72 bp | AATCACTGCAACCCAGAATCGCCCCACGACATGCCATaGCAGGAGTCACACAGTCACATCACCTACCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: NHCNPESPHDMP*QESHSHITYPN Trigger: ATTGGGGTAGGTGATGTGACTGTGTGACTCCTGTCATGGCATGTCGTGGGGCGATTCTGGGTTGCAGTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540159.3 |
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