RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BNIP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000140299

Ensembl transcript IDs: ENST00000267859.8, ENST00000415213.7, ENST00000417312.5, ENST00000439052.5, ENST00000448414.5, ENST00000477543.1, ENST00000478981.1, ENST00000557987.5, ENST00000560458.5, ENST00000607373.6, ENST00000612191.4

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTCAATTGCCTTCATATCAACCCTGTGGTCCTGTTCTCCAATCCTaGACATACGCCAGCGTCGTCCATCTTCTTTTTCCTCTGCTGCTG +
Preference number: 1 (lower is better)
Translates to: VQLPSYQPCGPVLQS*TYASVVHLLFPLLL
Trigger: CAGCAGCAGAGGAAAAAGAAGATGGACGACGCTGGCGTATGTTCAGGATTGGAGAACAGGACCACAGGGTTGATATGAAGGCAATTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448414.5
3UTR GCA 90 bp CCCCCTTCAATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTaGAGGTTTTCCTGCTGCATACAAGAAATGTTACCATCAGCAGTC +
Preference number: 1 (lower is better)
Translates to: PPSIHSLYSHTLRIA*RFSCCIQEMLPSAV
Trigger: GACTGCTGATGGTAACATTTCTTGTATGCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGATTGAAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 90 bp TCAAAGTGTGTTAATGTCTTAACAAACTCTGAATTGTGTTCTGTGTaGATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATC +
Preference number: 1 (lower is better)
Translates to: SKCVNVLTNSELCSV*IVLQGLCKSVALNI
Trigger: GATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATTCACACAGAACACAATTCAGAGTTTGTTAAGACATTAACACACTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 90 bp CTTACAGGGACCACATTAATATCTTGCACACACAGACATCAGAACTaGATTTCTGACAGTACTCGGCTGGGCAACATCATCTTAAGAGTA +
Preference number: 1 (lower is better)
Translates to: LTGTTLISCTHRHQN*ISDSTRLGNIILRV
Trigger: TACTCTTAAGATGATGTTGCCCAGCCGAGTACTGTCAGAAATTCAGTTCTGATGTCTGTGTGTGCAAGATATTAATGTGGTCCCTGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR GCA 90 bp CACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTaGTGCATACAAGAAATGTTACCATCAGCAGTCACATATGGTACT +
Preference number: 1 (lower is better)
Translates to: HSLYSHTLRIACRFS*CIQEMLPSAVTYGT
Trigger: AGTACCATATGTGACTGCTGATGGTAACATTTCTTGTATGCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 90 bp AGCAAGTTTAACACTTCTCCACATATAACATGGAAAAAGGAAGGATaGACCTACCGTAACATCTCTACCAATCTCATCAGGAAACTGGCC +
Preference number: 1 (lower is better)
Translates to: SKFNTSPHITWKKEG*TYRNISTNLIRKLA
Trigger: GGCCAGTTTCCTGATGAGATTGGTAGAGATGTTACGGTAGGTTCATCCTTCCTTTTTCCATGTTATATGTGGAGAAGTGTTAAACTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 90 bp TGCTACTCTAGGCCACTGTTTTGTAAAATACCTTACAGGAAGGGTTaGAGAGTAGCCATGACCTTCAAATTTGGAAGGTATTATGCTTAC +
Preference number: 1 (lower is better)
Translates to: CYSRPLFCKIPYRKG*RVAMTFKFGRYYAY
Trigger: GTAAGCATAATACCTTCCAAATTTGAAGGTCATGGCTACTCTTCAACCCTTCCTGTAAGGTATTTTACAAAACAGTGGCCTAGAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 90 bp GACCACATTAATATCTTGCACACACAGACATCAGAACTGAATTTCTaGCAGTACTCGGCTGGGCAACATCATCTTAAGAGTAGGAAAATA +
Preference number: 1 (lower is better)
Translates to: DHINILHTQTSELNF*QYSAGQHHLKSRKI
Trigger: TATTTTCCTACTCTTAAGATGATGTTGCCCAGCCGAGTACTGTCAGAAATTCAGTTCTGATGTCTGTGTGTGCAAGATATTAATGTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 90 bp TTAGATTTTTCCGTAACCTTCTATCAATTTGCTGATAACATTTCCTaGGCCATCCCAGACTGGGCATTTTTCTTCGAGTTGTTGCACCAT +
Preference number: 1 (lower is better)
Translates to: LDFSVTFYQFADNIS*AIPDWAFFFELLHH
Trigger: ATGGTGCAACAACTCGAAGAAAAATGCCCAGTCTGGGATGGCTCAGGAAATGTTATCAGCAAATTGATAGAAGGTTACGGAAAAATCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448414.5
3UTR CCA 90 bp AATACCTTACAGGAAGGGTTGAAGAGTAGCCATGACCTTCAAATTTaGAAGGTATTATGCTTACCAGCTGTGTATGAGCCTTTCAAGTAT +
Preference number: 1 (lower is better)
Translates to: NTLQEGLKSSHDLQI*KVLCLPAVYEPFKY
Trigger: ATACTTGAAAGGCTCATACACAGCTGGTAAGCATAATACCTTCCAAATTTGAAGGTCATGGCTACTCTTCAACCCTTCCTGTAAGGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 90 bp GATTCCATTAAGGTGCAGGTTAAAGCAGGTATCCCTTTAGTTTACTaGTTCACAGCACCTCATTTTCATTATATCCCAGGTGTTATCACT +
Preference number: 1 (lower is better)
Translates to: DSIKVQVKAGIPLVY*FTAPHFHYIPGVIT
Trigger: AGTGATAACACCTGGGATATAATGAAAATGAGGTGCTGTGAATCAGTAAACTAAAGGGATACCTGCTTTAACCTGCACCTTAATGGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 90 bp TGTGGGGTGAATAGAACGTCTTCCCTTGGTGCTTGCTTAGGAGTATaGTCAAGCAGAACACAGAATCAAATTATTTCACATGAAAAACTT +
Preference number: 1 (lower is better)
Translates to: CGVNRTSSLGACLGV*SSRTQNQIISHEKL
Trigger: AAGTTTTTCATGTGAAATAATTTGATTCTGTGTTCTGCTTGATCATACTCCTAAGCAAGCACCAAGGGAAGACGTTCTATTCACCCCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 90 bp TCCTTTAGAACTTCAAAGGAAAGTTACATAACTGGGTCTCACCATTaGTCTGATTCTAAGTTCATTCAGAATTTCAAGAAGGGCAGAGGG +
Preference number: 1 (lower is better)
Translates to: SFRTSKESYITGSHH*SDSKFIQNFKKGRG
Trigger: CCCTCTGCCCTTCTTGAAATTCTGAATGAACTTAGAATCAGATCAATGGTGAGACCCAGTTATGTAACTTTCCTTTGAAGTTCTAAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR GCA 90 bp GAAGGGTTGAAGAGTAGCCATGACCTTCAAATTTGGAAGGTATTATaGTTACCAGCTGTGTATGAGCCTTTCAAGTATATGACACAATAT +
Preference number: 1 (lower is better)
Translates to: EGLKSSHDLQIWKVL*LPAVYEPFKYMTQY
Trigger: ATATTGTGTCATATACTTGAAAGGCTCATACACAGCTGGTAAGCATAATACCTTCCAAATTTGAAGGTCATGGCTACTCTTCAACCCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR GCA 90 bp ACCCTCAATCCTAAACTTTTAAGTGCTGTAACTGCTAACCTTCTCTaGTCGAACTTGCTTCTGTATGAAGAGACAAAGAAAGAGAAAATA +
Preference number: 1 (lower is better)
Translates to: TLNPKLLSAVTANLL*SNLLLYEETKKEKI
Trigger: TATTTTCTCTTTCTTTGTCTCTTCATACAGAAGCAAGTTCGAGCAGAGAAGGTTAGCAGTTACAGCACTTAAAAGTTTAGGATTGAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR TCA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCAAGAGCTGCTGGATCTaGGTTAAGTCAGGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCKSCWI*VKSGGC
Trigger: GCAGCCTCCTGACTTAACTCAGATCCAGCAGCTCTT...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR CAA 90 bp CCCCACTTCCCTCACCAGTTGGCCTTCCCATTCAAGTCTAAGTTCTaGACTCTTTCTCGCAGCAACTCAAACTACACAATTCCTATGACC +
Preference number: 2 (lower is better)
Translates to: PHFPHQLAFPFKSKF*TLSRSNSNYTIPMT
Trigger: GGTCATAGGAATTGTGTAGTTTGAGTTGCTGCGAGAAAGAGTCAAGAACTTAGACTTGAATGGGAAGGCCAACTGGTGAGGGAAGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR GCA 90 bp TGGTCCTGTTCTCCAATCCTGAACATACGCCAGCGTCGTCCATCTTCTTTTTCCGAGGGGGAAACCTACTaGATGTTAGTTGTTTCCAAG +
Preference number: 2 (lower is better)
Translates to: WSCSPILNIRQRRPSSFSEGETY*MLVVSK
Trigger: CTTGGAAACAACTAACATGCAGTAGGTTTCCCCCTC...GGAAAAAGAAGATGGACGACGCTGGCGTATGTTCAGGATTGGAGAACAGGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448414.5
3UTR-3UTR CCA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCAGGGGAGCAATACCCTaGACACATAGCTTATTTCAC +
Preference number: 2 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCRGAIP*THSLFH
Trigger: GTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCT...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR GCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTAATGCAGAAACAGCACTaGTCCATCAGCACATTCTTC +
Preference number: 2 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLMQKQH*SISTFF
Trigger: GAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR CCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTAAGGGGAGCAATACCCTaGACACATAGCTTATTTCAC +
Preference number: 2 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLRGAIP*THSLFH
Trigger: GTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCT...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR TCA 90 bp AATACTACTCAGCACTCATATACACTCAGGGGAGCAATACCCTGGACACATAGCCCAATAAATGCATTATaGATGCAGAAACAGCACTGC +
Preference number: 2 (lower is better)
Translates to: NTTQHSYTLRGAIPWTHSPINAL*MQKQHC
Trigger: GCAGTGCTGTTTCTGCATTCATAATGCATTTATTGG...GCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATGAGTGCTGAGTAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
3UTR-3UTR GCA 90 bp CATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATTTCACATTAGTGATGCAGAAACAGCACTaGTCCATCAGCACATTCTTC +
Preference number: 2 (lower is better)
Translates to: HIHSGEQYPGHIAYFTLVMQKQH*SISTFF
Trigger: GAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT...CACTAATGTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
3UTR-3UTR GCA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCACTCATCACATTCTCTaGAATACTACTCAGCACTCA +
Preference number: 2 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCTHHIL*NTTQHS
Trigger: TGAGTGCTGAGTAGTATTGCAGAGAATGTGATGAGT...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR GCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTACAGATTCCATTAAGGTaGAGGTTAAAGCAGGTATCC +
Preference number: 2 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLQIPLR*RLKQVS
Trigger: GGATACCTGCTTTAACCTGCACCTTAATGGAATCTG...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR TCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTAACTGGGTCTCACCATTaGTCTGATTCTAAGTTCATT +
Preference number: 2 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLTGSHH*SDSKFI
Trigger: AATGAACTTAGAATCAGATCAATGGTGAGACCCAGT...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR CCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTAATCTCATCAGGAAACTaGCCTGTTCTATCTGATATG +
Preference number: 2 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLISSGN*PVLSDM
Trigger: CATATCAGATAGAACAGGCCAGTTTCCTGATGAGAT...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR TCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTAATCCCTTTAGTTTACTaGTTCACAGCACCTCATTTT +
Preference number: 2 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLIPLVY*FTAPHF
Trigger: AAAATGAGGTGCTGTGAATCAGTAAACTAAAGGGAT...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR GCA 90 bp AATGCCTCTGCTAGACCCTACTTAGAATCATATTTCTTCATATCTCCCTCTGAGCATCCACTTCAATTTTaGTACTCTAGGCCACTGTTT +
Preference number: 2 (lower is better)
Translates to: NASARPYLESYFFISPSEHPLQF*YSRPLF
Trigger: AAACAGTGGCCTAGAGTAGCAAAATTGAAGTGGATG...CTCAGAGGGAGATATGAAGAAATATGATTCTAAGTAGGGTCTAGCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR GCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTACTACAGATATATGCTTaGCAATCAGCATATTTCAGT +
Preference number: 2 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLLQIYA*QSAYFS
Trigger: ACTGAAATATGCTGATTGGCAAGCATATATCTGTAG...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR TCA 90 bp ATGACCTTCAAATTTGGAAGGTATTATGCTTACCAGCTGTGTATGAGCCTTTCAAAACCAGTACAGCAGTaGACAGTCCCTTGTATAATA +
Preference number: 2 (lower is better)
Translates to: MTFKFGRYYAYQLCMSLSKPVQQ*TVPCII
Trigger: TATTATACAAGGGACTGTTCACTGCTGTACTGGTTT...TGAAAGGCTCATACACAGCTGGTAAGCATAATACCTTCCAAATTTGAAGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR GCA 90 bp GCCATCCCAGACTGGGCATTTTTCTTCGAGTTGTTGCACCATTTAAATAAACTATTTATAGGGTTCAATTaGCTTCATATCAACCCTGTG +
Preference number: 2 (lower is better)
Translates to: AIPDWAFFFELLHHLNKLFIGFN*LHINPV
Trigger: CACAGGGTTGATATGAAGGCAATTGAACCCTATAAA...TAGTTTATTTAAATGGTGCAACAACTCGAAGAAAAATGCCCAGTCTGGGATGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448414.5
3UTR-3UTR TCA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAACCAATAAATGCATTATaGATGCAGAAACAGCACTGC +
Preference number: 2 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKPINAL*MQKQHC
Trigger: GCAGTGCTGTTTCTGCATTCATAATGCATTTATTGG...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 72 bp CCTTCATATCAACCCTGTGGTCCTGTTCTCCAATCCTaGACATACGCCAGCGTCGTCCATCTTCTTTTTCCT +
Preference number: 3 (lower is better)
Translates to: PSYQPCGPVLQS*TYASVVHLLFP
Trigger: AGGAAAAAGAAGATGGACGACGCTGGCGTATGTTCAGGATTGGAGAACAGGACCACAGGGTTGATATGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448414.5
3UTR-3UTR CAA 90 bp ATCAACCCTGTGGTCCTGTTCTCCAATCCTGAACATACGCCAGCGTCGTCCATCATTACTTCAGTAGTCTaGGGTTTTGGAAGATCATCA +
Preference number: 3 (lower is better)
Translates to: INPVVLFSNPEHTPASSIITSVV*GFGRSS
Trigger: TGATGATCTTCCAAAACCCAAGACTACTGAAGTAAT...GATGGACGACGCTGGCGTATGTTCAGGATTGGAGAACAGGACCACAGGGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448414.5
3UTR-3UTR CAA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTAAAGTGTGCAATGCGCTaGCATCTGTACTTGCTGAAT +
Preference number: 3 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLKCAMR*HLYLLN
Trigger: ATTCAGCAAGTACAGATGCAAGCGCATTGCACACTT...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 72 bp CTCACCAGTTGGCCTTCCCATTCAAGTCTAAGTTCTTaGCTCTTTCTCGCAGCAACTCAAACTACACAATTC +
Preference number: 3 (lower is better)
Translates to: LTSWPSHSSLSS*LFLAATQTTQF
Trigger: GAATTGTGTAGTTTGAGTTGCTGCGAGAAAGAGTCAAGAACTTAGACTTGAATGGGAAGGCCAACTGGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 72 bp GTTAATGTCTTAACAAACTCTGAATTGTGTTCTGTGTaGATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCC +
Preference number: 3 (lower is better)
Translates to: VNVLTNSELCSV*IVLQGLCKSVA
Trigger: GGCCACTGACTTGCACAGCCCTTGGAGCACTATTCACACAGAACACAATTCAGAGTTTGTTAAGACATTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 72 bp TCCGTAACCTTCTATCAATTTGCTGATAACATTTCCTaGGCCATCCCAGACTGGGCATTTTTCTTCGAGTTG +
Preference number: 3 (lower is better)
Translates to: SVTFYQFADNIS*AIPDWAFFFEL
Trigger: CAACTCGAAGAAAAATGCCCAGTCTGGGATGGCTCAGGAAATGTTATCAGCAAATTGATAGAAGGTTACGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448414.5
3UTR GCA 72 bp TATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTaGTGCATACAAGAAATGTTACCATCAGCAGTCACA +
Preference number: 3 (lower is better)
Translates to: YSHTLRIACRFS*CIQEMLPSAVT
Trigger: TGTGACTGCTGATGGTAACATTTCTTGTATGCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR CAA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCCTAAATTCAAGAAATTaGCAAACCAGTACAGCAGTG +
Preference number: 3 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCLNSRN*QTSTAV
Trigger: CACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAG...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR CAA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTAGCTACAGATATATGCTaGCCAATCAGCATATTTCAG +
Preference number: 3 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLATDIC*PISIFQ
Trigger: CTGAAATATGCTGATTGGCAAGCATATATCTGTAGC...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 72 bp AATATCTTGCACACACAGACATCAGAACTGAATTTCTaGCAGTACTCGGCTGGGCAACATCATCTTAAGAGT +
Preference number: 3 (lower is better)
Translates to: NILHTQTSELNF*QYSAGQHHLKS
Trigger: ACTCTTAAGATGATGTTGCCCAGCCGAGTACTGTCAGAAATTCAGTTCTGATGTCTGTGTGTGCAAGATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR GCA 72 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTaGAGGTTTTCCTGCTGCATACAAGAAATGTTACCA +
Preference number: 3 (lower is better)
Translates to: IHSLYSHTLRIA*RFSCCIQEMLP
Trigger: TGGTAACATTTCTTGTATGCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR CAA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTAGAAGGAATGCCTAACTaGTTATTGTTAGTTTGCTTC +
Preference number: 3 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLEGMPN*LLLVCF
Trigger: GAAGCAAACTAACAATAACAAGTTAGGCATTCCTTC...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR CAA 90 bp ATCAACTTTTCCCCCTTCAATCCACAGTCTTTATTCACATACCTTGCGTATAGCGCAGTGAACAGTCCCTaGTATAATACAAAAGTCCAT +
Preference number: 3 (lower is better)
Translates to: INFSPFNPQSLFTYLAYSAVNSP*YNTKVH
Trigger: ATGGACTTTTGTATTATACAAGGGACTGTTCACTGC...GCTATACGCAAGGTATGTGAATAAAGACTGTGGATTGAAGGGGGAAAAGTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR CAA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAAACCTTACAGGAAGGGTaGAAGAGTAGCCATGACCTT +
Preference number: 3 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKTLQEG*KSSHDL
Trigger: AAGGTCATGGCTACTCTTCAACCCTTCCTGTAAGGT...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 72 bp AGGCCACTGTTTTGTAAAATACCTTACAGGAAGGGTTaGAGAGTAGCCATGACCTTCAAATTTGGAAGGTAT +
Preference number: 3 (lower is better)
Translates to: RPLFCKIPYRKG*RVAMTFKFGRY
Trigger: ATACCTTCCAAATTTGAAGGTCATGGCTACTCTTCAACCCTTCCTGTAAGGTATTTTACAAAACAGTGGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 72 bp AAGGTGCAGGTTAAAGCAGGTATCCCTTTAGTTTACTaGTTCACAGCACCTCATTTTCATTATATCCCAGGT +
Preference number: 3 (lower is better)
Translates to: KVQVKAGIPLVY*FTAPHFHYIPG
Trigger: ACCTGGGATATAATGAAAATGAGGTGCTGTGAATCAGTAAACTAAAGGGATACCTGCTTTAACCTGCACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 72 bp AACACTTCTCCACATATAACATGGAAAAAGGAAGGATaGACCTACCGTAACATCTCTACCAATCTCATCAGG +
Preference number: 3 (lower is better)
Translates to: NTSPHITWKKEG*TYRNISTNLIR
Trigger: CCTGATGAGATTGGTAGAGATGTTACGGTAGGTTCATCCTTCCTTTTTCCATGTTATATGTGGAGAAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR CAA 90 bp AATGCCTCTGCTAGACCCTACTTAGAATCATATTTCTTCATATCTCCCTCTGAGCTAAATTCAAGAAATTaGCAAACCAGTACAGCAGTG +
Preference number: 3 (lower is better)
Translates to: NASARPYLESYFFISPSELNSRN*QTSTAV
Trigger: CACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAG...CTCAGAGGGAGATATGAAGAAATATGATTCTAAGTAGGGTCTAGCAGAGGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR CAA 90 bp ATCAACTTTTCCCCCTTCAATCCACAGTCTTTATTCACATACCTTGCGTATAGCCGCTTGCATCTGTACTaGCTGAATTATGAAACAAAT +
Preference number: 3 (lower is better)
Translates to: INFSPFNPQSLFTYLAYSRLHLY*LNYETN
Trigger: ATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCG...GCTATACGCAAGGTATGTGAATAAAGACTGTGGATTGAAGGGGGAAAAGTTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR CAA 90 bp GCCATCCCAGACTGGGCATTTTTCTTCGAGTTGTTGCACCATTTAAATAAACTATTTTATAGGGTTCAATaGCCTTCATATCAACCCTGT +
Preference number: 3 (lower is better)
Translates to: AIPDWAFFFELLHHLNKLFYRVQ*PSYQPC
Trigger: ACAGGGTTGATATGAAGGCAATTGAACCCTATAAAA...TAGTTTATTTAAATGGTGCAACAACTCGAAGAAAAATGCCCAGTCTGGGATGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448414.5
3UTR-3UTR CAA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAAGCAGTGAACAGTCCCTaGTATAATACAAAAGTCCAT +
Preference number: 3 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKAVNSP*YNTKVH
Trigger: ATGGACTTTTGTATTATACAAGGGACTGTTCACTGC...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR-3UTR CAA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGCTAAATTCAAGAAATTaGCAAACCAGTACAGCAGTG +
Preference number: 3 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMLNSRN*QTSTAV
Trigger: CACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAG...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
3UTR-3UTR CAA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAACGCTTGCATCTGTACTaGCTGAATTATGAAACAAAT +
Preference number: 3 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKRLHLY*LNYETN
Trigger: ATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCG...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 72 bp TCAAATTTGGAAGGTATTATGCTTACCAGCTGTGTATaGGCCTTTCAAGTATATGACACAATATCAGATCAA +
Preference number: 3 (lower is better)
Translates to: SNLEGIMLTSCV*AFQVYDTISDQ
Trigger: TTGATCTGATATTGTGTCATATACTTGAAAGGCTCATACACAGCTGGTAAGCATAATACCTTCCAAATTTGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
3UTR TCA 72 bp ACTTCAAAGGAAAGTTACATAACTGGGTCTCACCATTaGTCTGATTCTAAGTTCATTCAGAATTTCAAGAAG +
Preference number: 3 (lower is better)
Translates to: TSKESYITGSHH*SDSKFIQNFKK
Trigger: CTTCTTGAAATTCTGAATGAACTTAGAATCAGATCAATGGTGAGACCCAGTTATGTAACTTTCCTTTGAAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCCCCCTCGGTCGGCGGTaGAGACCCCGGCCCAATCCC +
Preference number: 4 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCPLGRR*RPRPNP
Trigger: GGGATTGGGCCGGGGTCTCCACCGCCGACCGAGGGG...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTACCCCTCGGTCGGCGGTaGAGACCCCGGCCCAATCCC +
Preference number: 4 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLPLGRR*RPRPNP
Trigger: GGGATTGGGCCGGGGTCTCCACCGCCGACCGAGGGG...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGAGCTAGCGCTCGCGCCTaGACTCGCGGGGTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGASARA*TRGVGL
Trigger: AAGGCCGACCCCGCGAGTGCAGGCGCGAGCGCTAGC...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267859.8
CDS-3UTR CCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTAGGCCTTCCTTGCCTGTaGGCGGACCCGTCGCGTCGA +
Preference number: 4 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLGLPCL*ADPSRR
Trigger: TCGACGCGACGGGTCCGCCCACAGGCAAGGAAGGCC...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267859.8
CDS-3UTR CCA 90 bp AATACTACTCAGCACTCATATACACTCAGGGGAGCAATACCCTGGACACATAGCGCGGCGGCGGAGGCGTaGCGTCTTCTTGAAACCCAC +
Preference number: 4 (lower is better)
Translates to: NTTQHSYTLRGAIPWTHSAAAEA*RLLETH
Trigger: GTGGGTTTCAAGAAGACGCCACGCCTCCGCCGCCGC...GCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATGAGTGCTGAGTAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000612191.4
CDS-3UTR TCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGAGTCGGCGGCAGCAGCTaGCCCGGACACAGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRVGGSS*PGHSEK
Trigger: CTTCTCACTGTGTCCGGGTCAGCTGCTGCCGCCGAC...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000612191.4
CDS-3UTR TCA 90 bp ACCCTGTGGTCCTGTTCTCCAATCCTGAACATACGCCAGCGTCGTCCATCTTCTGCTGATAACATTTCCTaGGCCATCCCAGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: TLWSCSPILNIRQRRPSSADNIS*AIPDWA
Trigger: TGCCCAGTCTGGGATGGCTCAGGAAATGTTATCAGC...AGAAGATGGACGACGCTGGCGTATGTTCAGGATTGGAGAACAGGACCACAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448414.5
CDS-3UTR CCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGAGCGGCGGCGGAGGCGTaGCGTCTTCTTGAAACCCAC +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGAAAEA*RLLETH
Trigger: GTGGGTTTCAAGAAGACGCCACGCCTCCGCCGCCGC...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000612191.4
CDS-3UTR TCA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTGTCGGCGGCAGCAGCTaGCCCGGACACAGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ANKCIMNAETALLHQHILVGGSS*PGHSEK
Trigger: CTTCTCACTGTGTCCGGGTCAGCTGCTGCCGCCGAC...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000612191.4
CDS-3UTR TCA 90 bp ATGACCTTCAAATTTGGAAGGTATTATGCTTACCAGCTGTGTATGAGCCTTTCACCGGCGACGTGGGGCTaGCGGCCAGGTCGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: MTFKFGRYYAYQLCMSLSPATWG*RPGRKK
Trigger: CTTTTTGCGACCTGGCCGTCAGCCCCACGTCGCCGG...TGAAAGGCTCATACACAGCTGGTAAGCATAATACCTTCCAAATTTGAAGGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAAGGGGTCGGCCTTCCTTaGCTGTGGGCGGACCCGTCG +
Preference number: 4 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKGVGLP*LWADPS
Trigger: CGACGGGTCCGCCCACAGGCAAGGAAGGCCGACCCC...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000267859.8
CDS-3UTR TCA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCCTGACCCGGACACAGTaGGAAGCCCCGGCGGAAGTG +
Preference number: 4 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPLTRTQ*EAPAEV
Trigger: CACTTCCGCCGGGGCTTCTCACTGTGTCCGGGTCAG...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000612191.4
CDS-3UTR TCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGACCTGTTCTCCAATCCTaGACATACGCCAGCGTCGTC +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRPVLQS*TYASVV
Trigger: GACGACGCTGGCGTATGTTCAGGATTGGAGAACAGG...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCGCTGATAACATTTCCTaGGCCATCCCAGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCADNIS*AIPDWA
Trigger: TGCCCAGTCTGGGATGGCTCAGGAAATGTTATCAGC...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCGCACTCCAGAATGGGTaGCAGAGTGAGTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCALQNG*QSESLS
Trigger: AGACAGAGACTCACTCTGTCACCCATTCTGGAGTGC...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp AATACTACTCAGCACTCATATACACTCAGGGGAGCAATACCCTGGACACATAGCATTAGCCGGGCATTGTaGCGTGTGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: NTTQHSYTLRGAIPWTHSISRAL*RVPVIP
Trigger: TGGGATTACAGGCACACGCCACAATGCCCGGCTAAT...GCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATGAGTGCTGAGTAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp TCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAACTGACCCGGACACAGTaGGAAGCCCCGGCGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SRNLQTSTAVNSPLYNTKLTRTQ*EAPAEV
Trigger: CACTTCCGCCGGGGCTTCTCACTGTGTCCGGGTCAG...TTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000612191.4
CDS-3UTR TCA 90 bp ATCAACTTTTCCCCCTTCAATCCACAGTCTTTATTCACATACCTTGCGTATAGCGGCAGGAGAAATGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: INFSPFNPQSLFTYLAYSGRRNA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCATTTCTCCTGCC...GCTATACGCAAGGTATGTGAATAAAGACTGTGGATTGAAGGGGGAAAAGTTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTAAAGCATTTGGGAGGCTaGGACAGGCAGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLKHLGG*DRQIMR
Trigger: CCTCATGATCTGCCTGTCTCAGCCTCCCAAATGCTT...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp CATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATTTCACATTAGTGCCAGGATTGCGCCACTaGACTCCAGAATGGGTGACA +
Preference number: 4 (lower is better)
Translates to: HIHSGEQYPGHIAYFTLVPGLRH*TPEWVT
Trigger: TGTCACCCATTCTGGAGTGCAGTGGCGCAATCCTGG...CACTAATGTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp ACCCTGTGGTCCTGTTCTCCAATCCTGAACATACGCCAGCGTCGTCCATCTTCTCAGCAAACACAACAATaGCATTTAATCCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: TLWSCSPILNIRQRRPSSQQTQQ*HLIHPH
Trigger: ATGGGGATGGATTAAATGCCATTGTTGTGTTTGCTG...AGAAGATGGACGACGCTGGCGTATGTTCAGGATTGGAGAACAGGACCACAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448414.5
CDS-3UTR TCA 90 bp GCCATCCCAGACTGGGCATTTTTCTTCGAGTTGTTGCACCATTTAAATAAACTACCTGTTCTCCAATCCTaGACATACGCCAGCGTCGTC +
Preference number: 4 (lower is better)
Translates to: AIPDWAFFFELLHHLNKLPVLQS*TYASVV
Trigger: GACGACGCTGGCGTATGTTCAGGATTGGAGAACAGG...TAGTTTATTTAAATGGTGCAACAACTCGAAGAAAAATGCCCAGTCTGGGATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448414.5
CDS-3UTR TCA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTCCTGTTCTCCAATCCTaGACATACGCCAGCGTCGTC +
Preference number: 4 (lower is better)
Translates to: KCIMNAETALLHQHILQSPVLQS*TYASVV
Trigger: GACGACGCTGGCGTATGTTCAGGATTGGAGAACAGG...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTACCTTACAGGAAGGGTTaGAGAGTAGCCATGACCTTC +
Preference number: 4 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLPYRKG*RVAMTF
Trigger: GAAGGTCATGGCTACTCTTCAACCCTTCCTGTAAGG...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp CATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATTTCACATTAGTGAAGTCAGGAGGCTGCTaGGGAATGTTTCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: HIHSGEQYPGHIAYFTLVKSGGC*GMFHPG
Trigger: CCCAGGATGAAACATTCCTCAGCAGCCTCCTGACTT...CACTAATGTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGAAAGAGCTGCTGGATCTaGGTTAAGTCAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGKSCWI*VKSGGC
Trigger: GCAGCCTCCTGACTTAACTCAGATCCAGCAGCTCTT...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp CATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATTTCACATTAGTGAAGAGCTGCTGGATCTaGGTTAAGTCAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HIHSGEQYPGHIAYFTLVKSCWI*VKSGGC
Trigger: GCAGCCTCCTGACTTAACTCAGATCCAGCAGCTCTT...CACTAATGTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp AATGCCTCTGCTAGACCCTACTTAGAATCATATTTCTTCATATCTCCCTCTGAGGAGACAGGCAGATCATaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: NASARPYLESYFFISPSEETGRS*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCATGATCTGCCTGTCTC...CTCAGAGGGAGATATGAAGAAATATGATTCTAAGTAGGGTCTAGCAGAGGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCACTTCCCTCACCAGTTaGCCTTCCCATTCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCTSLTS*PSHSSL
Trigger: TAGACTTGAATGGGAAGGCCAACTGGTGAGGGAAGT...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTGCTGATAACATTTCCTaGGCCATCCCAGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: KCIMNAETALLHQHILQSADNIS*AIPDWA
Trigger: TGCCCAGTCTGGGATGGCTCAGGAAATGTTATCAGC...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTGCACTCCAGAATGGGTaGCAGAGTGAGTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ANKCIMNAETALLHQHILALQNG*QSESLS
Trigger: AGACAGAGACTCACTCTGTCACCCATTCTGGAGTGC...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTAGAATTGTGTTCTGTGTaGATAGTGCTCCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLELCSV*IVLQGL
Trigger: CAGCCCTTGGAGCACTATTCACACAGAACACAATTC...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGATCAGAACTGAATTTCTaGCAGTACTCGGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRSELNF*QYSAGQ
Trigger: TTGCCCAGCCGAGTACTGTCAGAAATTCAGTTCTGA...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCCACAGACATCAGAACTaGATTTCTGACAGTACTCGG +
Preference number: 4 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCHRHQN*ISDSTR
Trigger: CCGAGTACTGTCAGAAATTCAGTTCTGATGTCTGTG...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGATCTAGTGAGCCAGGCTaGTCCTCTGGTCCAGTTATA +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGSSEPG*SSGPVI
Trigger: TATAACTGGACCAGAGGACCAGCCTGGCTCACTAGA...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp AATACTACTCAGCACTCATATACACTCAGGGGAGCAATACCCTGGACACATAGCAGGGGAGCAATACCCTaGACACATAGCTTATTTCAC +
Preference number: 4 (lower is better)
Translates to: NTTQHSYTLRGAIPWTHSRGAIP*THSLFH
Trigger: GTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCT...GCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATGAGTGCTGAGTAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTATTAGCCGGGCATTGTaGCGTGTGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: ANKCIMNAETALLHQHILISRAL*RVPVIP
Trigger: TGGGATTACAGGCACACGCCACAATGCCCGGCTAAT...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTATGTAATCCAAGCATTTaGGAGGCTGAGACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLCNPSI*EAETGR
Trigger: TCTGCCTGTCTCAGCCTCCCAAATGCTTGGATTACA...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATCCTGTTCTCCAATCCTaGACATACGCCAGCGTCGTC +
Preference number: 4 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHPVLQS*TYASVV
Trigger: GACGACGCTGGCGTATGTTCAGGATTGGAGAACAGG...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCCCTGTTCTCCAATCCTaGACATACGCCAGCGTCGTC +
Preference number: 4 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPPVLQS*TYASVV
Trigger: GACGACGCTGGCGTATGTTCAGGATTGGAGAACAGG...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp AATACTACTCAGCACTCATATACACTCAGGGGAGCAATACCCTGGACACATAGCCTTACCAGCTGTGTATaGGCCTTTCAAGTATATGAC +
Preference number: 4 (lower is better)
Translates to: NTTQHSYTLRGAIPWTHSLTSCV*AFQVYD
Trigger: GTCATATACTTGAAAGGCTCATACACAGCTGGTAAG...GCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATGAGTGCTGAGTAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp ATGACCTTCAAATTTGGAAGGTATTATGCTTACCAGCTGTGTATGAGCCTTTCAAAGTCAGGAGGCTGCTaGGGAATGTTTCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: MTFKFGRYYAYQLCMSLSKSGGC*GMFHPG
Trigger: CCCAGGATGAAACATTCCTCAGCAGCCTCCTGACTT...TGAAAGGCTCATACACAGCTGGTAAGCATAATACCTTCCAAATTTGAAGGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAAGGCAGGAGAAATGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKGRRNA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCATTTCTCCTGCC...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp AATACTACTCAGCACTCATATACACTCAGGGGAGCAATACCCTGGACACATAGCTGGAAAAAGGAAGGATaGACCTACCGTAACATCTCT +
Preference number: 4 (lower is better)
Translates to: NTTQHSYTLRGAIPWTHSWKKEG*TYRNIS
Trigger: AGAGATGTTACGGTAGGTTCATCCTTCCTTTTTCCA...GCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATGAGTGCTGAGTAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp AATACTACTCAGCACTCATATACACTCAGGGGAGCAATACCCTGGACACATAGCCTACTCCCATTTGCTTaGGCAAGTTTAACACTTCTC +
Preference number: 4 (lower is better)
Translates to: NTTQHSYTLRGAIPWTHSLLPFA*ASLTLL
Trigger: GAGAAGTGTTAAACTTGCTCAAGCAAATGGGAGTAG...GCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATGAGTGCTGAGTAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCGCAAGTCAGTGGCCCTaGACATCATCAATATTTACT +
Preference number: 4 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCASQWP*TSSIFT
Trigger: AGTAAATATTGATGATGTTCAGGGCCACTGACTTGC...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGAGAATTGTGTTCTGTGTaGATAGTGCTCCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGELCSV*IVLQGL
Trigger: CAGCCCTTGGAGCACTATTCACACAGAACACAATTC...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTGCTGGTCATAAATACTaGACCATCGTAGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KCIMNAETALLHQHILQSAGHKY*TIVAQP
Trigger: TGGCTGGGCTACGATGGTTCAGTATTTATGACCAGC...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415213.7
CDS-3UTR GCA 90 bp TGGTCCTGTTCTCCAATCCTGAACATACGCCAGCGTCGTCCATCTTCTTTTTCCTTTATAGGGTTCAATTaGCTTCATATCAACCCTGTG +
Preference number: 4 (lower is better)
Translates to: WSCSPILNIRQRRPSSFSFIGFN*LHINPV
Trigger: CACAGGGTTGATATGAAGGCAATTGAACCCTATAAA...GGAAAAAGAAGATGGACGACGCTGGCGTATGTTCAGGATTGGAGAACAGGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448414.5
CDS-3UTR GCA 90 bp AATACTACTCAGCACTCATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATGCATTCTGGTATaGCAACGTATTCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: NTTQHSYTLRGAIPWTHSLCILV*QRIPWG
Trigger: TCCCCATGGAATACGTTGGCATACCAGAATGCATAA...GCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATGAGTGCTGAGTAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGAATGCAGAAACAGCACTaGTCCATCAGCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRMQKQH*SISTFF
Trigger: GAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTAAACGTCTTCCCTTGGTaGTTGCTTAGGAGTATGATC +
Preference number: 4 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLNVFPW*LLRSMI
Trigger: GATCATACTCCTAAGCAAGCACCAAGGGAAGACGTT...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp CATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATTTCACATTAGTGACCTTGCGTATAGCCTaGAGGTTTTCCTGCTGCATA +
Preference number: 4 (lower is better)
Translates to: HIHSGEQYPGHIAYFTLVTLRIA*RFSCCI
Trigger: TATGCAGCAGGAAAACCTGCAGGCTATACGCAAGGT...CACTAATGTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp AATACTACTCAGCACTCATATACACTCAGGGGAGCAATACCCTGGACACATAGCACTGCTAACCTTCTCTaGTCGAACTTGCTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: NTTQHSYTLRGAIPWTHSTANLL*SNLLLY
Trigger: ATACAGAAGCAAGTTCGAGCAGAGAAGGTTAGCAGT...GCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATGAGTGCTGAGTAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp GCCATCCCAGACTGGGCATTTTTCTTCGAGTTGTTGCACCATTTAAATAAACTATCTAGTGAGCCAGGCTaGTCCTCTGGTCCAGTTATA +
Preference number: 4 (lower is better)
Translates to: AIPDWAFFFELLHHLNKLSSEPG*SSGPVI
Trigger: TATAACTGGACCAGAGGACCAGCCTGGCTCACTAGA...TAGTTTATTTAAATGGTGCAACAACTCGAAGAAAAATGCCCAGTCTGGGATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448414.5
CDS-3UTR CCA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTTCTAGTGAGCCAGGCTaGTCCTCTGGTCCAGTTATA +
Preference number: 4 (lower is better)
Translates to: ANKCIMNAETALLHQHILSSEPG*SSGPVI
Trigger: TATAACTGGACCAGAGGACCAGCCTGGCTCACTAGA...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGATTCATATCAACCCTGTaGTCCTGTTCTCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRFISTL*SCSPIL
Trigger: CAGGATTGGAGAACAGGACCACAGGGTTGATATGAA...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp GTCCATCAGGTATCTATAGTTAGGCTGACTACTTTCAGGCATGAAACAGACAGCTTCATATCAACCCTGTaGTCCTGTTCTCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: VHQVSIVRLTTFRHETDSFISTL*SCSPIL
Trigger: CAGGATTGGAGAACAGGACCACAGGGTTGATATGAA...GCTGTCTGTTTCATGCCTGAAAGTAGTCAGCCTAACTATAGATACCTGATGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448414.5
CDS-3UTR CCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGATGCCAACGTATTCCATaGGGACAAGTTCTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRCQRIP*GQVLLV
Trigger: AACTAGCAGAACTTGTCCCCATGGAATACGTTGGCA...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
3UTR CAA 72 bp TTTCCCCCTTCAATCCACAGTCTTTATTCACATACCTaGCGTATAGCCTGCAGGTTTTCCTGCTGCATACAA +
Preference number: 4 (lower is better)
Translates to: FPPSIHSLYSHT*RIACRFSCCIQ
Trigger: TTGTATGCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGATTGAAGGGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGAGACTACTTTCAGGCATaGAACAGACAGCAAACACAA +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRDYFQA*NRQQTQ
Trigger: TTGTGTTTGCTGTCTGTTTCATGCCTGAAAGTAGTC...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATGCTGATAACATTTCCTaGGCCATCCCAGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHADNIS*AIPDWA
Trigger: TGCCCAGTCTGGGATGGCTCAGGAAATGTTATCAGC...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGGAGACAGGCAGATCATaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMETGRS*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCATGATCTGCCTGTCTC...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGACTACTCCCATTTGCTTaGGCAAGTTTAACACTTCTC +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRLLPFA*ASLTLL
Trigger: GAGAAGTGTTAAACTTGCTCAAGCAAATGGGAGTAG...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTCAGAACTGAATTTCTaGCAGTACTCGGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: KCIMNAETALLHQHILQSSELNF*QYSAGQ
Trigger: TTGCCCAGCCGAGTACTGTCAGAAATTCAGTTCTGA...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGATTATGCATTCTGGTATaGCAACGTATTCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRLCILV*QRIPWG
Trigger: TCCCCATGGAATACGTTGGCATACCAGAATGCATAA...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCAGAAAGGAAAAAGTGTaGAATGCGCTTGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCRKEKV*NALASV
Trigger: TACAGATGCAAGCGCATTGCACACTTTTTCCTTTCT...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAACCAGGATTGCGCCACTaGACTCCAGAATGGGTGACA +
Preference number: 4 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKPGLRH*TPEWVT
Trigger: TGTCACCCATTCTGGAGTGCAGTGGCGCAATCCTGG...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp ATGACCTTCAAATTTGGAAGGTATTATGCTTACCAGCTGTGTATGAGCCTTTCATCTAGTGAGCCAGGCTaGTCCTCTGGTCCAGTTATA +
Preference number: 4 (lower is better)
Translates to: MTFKFGRYYAYQLCMSLSSSEPG*SSGPVI
Trigger: TATAACTGGACCAGAGGACCAGCCTGGCTCACTAGA...TGAAAGGCTCATACACAGCTGGTAAGCATAATACCTTCCAAATTTGAAGGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGATTCATATCAACCCTGTaGTCCTGTTCTCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGFISTL*SCSPIL
Trigger: CAGGATTGGAGAACAGGACCACAGGGTTGATATGAA...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp CATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATTTCACATTAGTGTTCATATCAACCCTGTaGTCCTGTTCTCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: HIHSGEQYPGHIAYFTLVFISTL*SCSPIL
Trigger: CAGGATTGGAGAACAGGACCACAGGGTTGATATGAA...CACTAATGTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp AATACTACTCAGCACTCATATACACTCAGGGGAGCAATACCCTGGACACATAGCCAGCAAACACAACAATaGCATTTAATCCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: NTTQHSYTLRGAIPWTHSQQTQQ*HLIHPH
Trigger: ATGGGGATGGATTAAATGCCATTGTTGTGTTTGCTG...GCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATGAGTGCTGAGTAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCCAGCAAACACAACAATaGCATTTAATCCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCQQTQQ*HLIHPH
Trigger: ATGGGGATGGATTAAATGCCATTGTTGTGTTTGCTG...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp AATGCCTCTGCTAGACCCTACTTAGAATCATATTTCTTCATATCTCCCTCTGAGACTTCCCTCACCAGTTaGCCTTCCCATTCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: NASARPYLESYFFISPSETSLTS*PSHSSL
Trigger: TAGACTTGAATGGGAAGGCCAACTGGTGAGGGAAGT...CTCAGAGGGAGATATGAAGAAATATGATTCTAAGTAGGGTCTAGCAGAGGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGATTCATCCAAATCATCTaGCAATACAGAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRFIQII*QYRAIT
Trigger: AGTGATGGCTCTGTATTGTCAGATGATTTGGATGAA...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGAGACTACTTTCAGGCATaGAACAGACAGCAAACACAA +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGDYFQA*NRQQTQ
Trigger: TTGTGTTTGCTGTCTGTTTCATGCCTGAAAGTAGTC...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGGCTGATAACATTTCCTaGGCCATCCCAGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMADNIS*AIPDWA
Trigger: TGCCCAGTCTGGGATGGCTCAGGAAATGTTATCAGC...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTAAAACCAGTACAGCAGTaGACAGTCCCTTGTATAATA +
Preference number: 4 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLKPVQQ*TVPCII
Trigger: TATTATACAAGGGACTGTTCACTGCTGTACTGGTTT...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGAAAACCAGTACAGCAGTaGACAGTCCCTTGTATAATA +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRKPVQQ*TVPCII
Trigger: TATTATACAAGGGACTGTTCACTGCTGTACTGGTTT...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCATCCCTTTAGTTTACTaGTTCACAGCACCTCATTTT +
Preference number: 4 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCIPLVY*FTAPHF
Trigger: AAAATGAGGTGCTGTGAATCAGTAAACTAAAGGGAT...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAAAAGCATTTGGGAGGCTaGGACAGGCAGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKKHLGG*DRQIMR
Trigger: CCTCATGATCTGCCTGTCTCAGCCTCCCAAATGCTT...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGATCAAGTCTAAGTTCTTaGCTCTTTCTCGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGSSLSS*LFLAAT
Trigger: AGTTGCTGCGAGAAAGAGTCAAGAACTTAGACTTGA...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp ATCAACTTTTCCCCCTTCAATCCACAGTCTTTATTCACATACCTTGCGTATAGCCACAGACATCAGAACTaGATTTCTGACAGTACTCGG +
Preference number: 4 (lower is better)
Translates to: INFSPFNPQSLFTYLAYSHRHQN*ISDSTR
Trigger: CCGAGTACTGTCAGAAATTCAGTTCTGATGTCTGTG...GCTATACGCAAGGTATGTGAATAAAGACTGTGGATTGAAGGGGGAAAAGTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTATGCAGAAACAGCACTaGTCCATCAGCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: ANKCIMNAETALLHQHILMQKQH*SISTFF
Trigger: GAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTGGAAAAAGTGTGCAATaGGCTTGCATCTGTACTTGC +
Preference number: 4 (lower is better)
Translates to: KCIMNAETALLHQHILQSGKSVQ*ACICTC
Trigger: GCAAGTACAGATGCAAGCGCATTGCACACTTTTTCC...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTAACTCATCACATTCTCTaGAATACTACTCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLTHHIL*NTTQHS
Trigger: TGAGTGCTGAGTAGTATTGCAGAGAATGTGATGAGT...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTACATCCACTTCAATTTTaGTACTCTAGGCCACTGTTT +
Preference number: 4 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLHPLQF*YSRPLF
Trigger: AAACAGTGGCCTAGAGTAGCAAAATTGAAGTGGATG...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTATGCAGGTTTTCCTGCTaGATACAAGAAATGTTACCA +
Preference number: 4 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLCRFSC*IQEMLP
Trigger: TGGTAACATTTCTTGTATGCAGCAGGAAAACCTGCA...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTATTCTCTGCTCGAACTTaGTTCTGTATGAAGAGACAA +
Preference number: 4 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLFSART*FCMKRQ
Trigger: TTGTCTCTTCATACAGAAGCAAGTTCGAGCAGAGAA...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTCTAGTGAGCCAGGCTaGTCCTCTGGTCCAGTTATA +
Preference number: 4 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPSSEPG*SSGPVI
Trigger: TATAACTGGACCAGAGGACCAGCCTGGCTCACTAGA...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGAAGTAGTCTTGGGTTTTaGAAGATCATCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGSSLGF*KIIFPL
Trigger: GAGTGGGAAGATGATCTTCCAAAACCCAAGACTACT...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp ATCAACTTTTCCCCCTTCAATCCACAGTCTTTATTCACATACCTTGCGTATAGCTTCATATCAACCCTGTaGTCCTGTTCTCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: INFSPFNPQSLFTYLAYSFISTL*SCSPIL
Trigger: CAGGATTGGAGAACAGGACCACAGGGTTGATATGAA...GCTATACGCAAGGTATGTGAATAAAGACTGTGGATTGAAGGGGGAAAAGTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGACAGCAAACACAACAATaGCATTTAATCCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRQQTQQ*HLIHPH
Trigger: ATGGGGATGGATTAAATGCCATTGTTGTGTTTGCTG...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGCCAACGTATTCCATaGGGACAAGTTCTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: KCIMNAETALLHQHILQSCQRIP*GQVLLV
Trigger: AACTAGCAGAACTTGTCCCCATGGAATACGTTGGCA...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp AATACTACTCAGCACTCATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTCTTCAGTCTTGTTTaGACTAGATGCCAAACTTAC +
Preference number: 4 (lower is better)
Translates to: NTTQHSYTLRGAIPWTHSFFSLV*TRCQTY
Trigger: GTAAGTTTGGCATCTAGTCCAAACAAGACTGAAGAA...GCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATGAGTGCTGAGTAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTAGGGGAGCAATACCCTaGACACATAGCTTATTTCAC +
Preference number: 4 (lower is better)
Translates to: ANKCIMNAETALLHQHILRGAIP*THSLFH
Trigger: GTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCT...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp AATGCCTCTGCTAGACCCTACTTAGAATCATATTTCTTCATATCTCCCTCTGAGAGGAATGTTTCATCCTaGGAATCCTCCAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: NASARPYLESYFFISPSERNVSS*ESSSIS
Trigger: AGAGATGCTGGAGGATTCCCAGGATGAAACATTCCT...CTCAGAGGGAGATATGAAGAAATATGATTCTAAGTAGGGTCTAGCAGAGGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTAGGAATGTTTCATCCTaGGAATCCTCCAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: ANKCIMNAETALLHQHILRNVSS*ESSSIS
Trigger: AGAGATGCTGGAGGATTCCCAGGATGAAACATTCCT...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGTTAAAAGGACACACATaGCCGGGCGTGGTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMLKGHT*PGVVAQ
Trigger: TTGAGCCACCACGCCCGGCCATGTGTGTCCTTTTAA...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAATTAAAAGGACACACATaGCCGGGCGTGGTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKLKGHT*PGVVAQ
Trigger: TTGAGCCACCACGCCCGGCCATGTGTGTCCTTTTAA...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp GCCATCCCAGACTGGGCATTTTTCTTCGAGTTGTTGCACCATTTAAATAAACTAGACTACTTTCAGGCATaGAACAGACAGCAAACACAA +
Preference number: 4 (lower is better)
Translates to: AIPDWAFFFELLHHLNKLDYFQA*NRQQTQ
Trigger: TTGTGTTTGCTGTCTGTTTCATGCCTGAAAGTAGTC...TAGTTTATTTAAATGGTGCAACAACTCGAAGAAAAATGCCCAGTCTGGGATGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448414.5
CDS-3UTR TCA 90 bp ATCAACTTTTCCCCCTTCAATCCACAGTCTTTATTCACATACCTTGCGTATAGCGACTACTTTCAGGCATaGAACAGACAGCAAACACAA +
Preference number: 4 (lower is better)
Translates to: INFSPFNPQSLFTYLAYSDYFQA*NRQQTQ
Trigger: TTGTGTTTGCTGTCTGTTTCATGCCTGAAAGTAGTC...GCTATACGCAAGGTATGTGAATAAAGACTGTGGATTGAAGGGGGAAAAGTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACCAATAAATGCATTATaGATGCAGAAACAGCACTGC +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGPINAL*MQKQHC
Trigger: GCAGTGCTGTTTCTGCATTCATAATGCATTTATTGG...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp CATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATTTCACATTAGTGCCAATAAATGCATTATaGATGCAGAAACAGCACTGC +
Preference number: 4 (lower is better)
Translates to: HIHSGEQYPGHIAYFTLVPINAL*MQKQHC
Trigger: GCAGTGCTGTTTCTGCATTCATAATGCATTTATTGG...CACTAATGTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGCCTTACAGGAAGGGTTaGAGAGTAGCCATGACCTTC +
Preference number: 4 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMPYRKG*RVAMTF
Trigger: GAAGGTCATGGCTACTCTTCAACCCTTCCTGTAAGG...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTTCAAGTCTAAGTTCTTaGCTCTTTCTCGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: ANKCIMNAETALLHQHILSSLSS*LFLAAT
Trigger: AGTTGCTGCGAGAAAGAGTCAAGAACTTAGACTTGA...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGATTTATAGGGTTCAATTaGCTTCATATCAACCCTGTG +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRFIGFN*LHINPV
Trigger: CACAGGGTTGATATGAAGGCAATTGAACCCTATAAA...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTTATGCATTCTGGTATaGCAACGTATTCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: KCIMNAETALLHQHILQSLCILV*QRIPWG
Trigger: TCCCCATGGAATACGTTGGCATACCAGAATGCATAA...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGAAGAAAGGAAAAAGTGTaGAATGCGCTTGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGRKEKV*NALASV
Trigger: TACAGATGCAAGCGCATTGCACACTTTTTCCTTTCT...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp CATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATTTCACATTAGTGACTCATCACATTCTCTaGAATACTACTCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: HIHSGEQYPGHIAYFTLVTHHIL*NTTQHS
Trigger: TGAGTGCTGAGTAGTATTGCAGAGAATGTGATGAGT...CACTAATGTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTGCCTGCAGGTTTTCCTaGTGCATACAAGAAATGTTA +
Preference number: 4 (lower is better)
Translates to: KCIMNAETALLHQHILQSACRFS*CIQEML
Trigger: TAACATTTCTTGTATGCAGCAGGAAAACCTGCAGGC...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGATTCTCTGCTCGAACTTaGTTCTGTATGAAGAGACAA +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGFSART*FCMKRQ
Trigger: TTGTCTCTTCATACAGAAGCAAGTTCGAGCAGAGAA...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp ATGACCTTCAAATTTGGAAGGTATTATGCTTACCAGCTGTGTATGAGCCTTTCAGCAGAGGGGGATGCTTaGCAGGTAATTCTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: MTFKFGRYYAYQLCMSLSAEGDA*QVILLY
Trigger: ATACAAAAGAATTACCTGGCAAGCATCCCCCTCTGC...TGAAAGGCTCATACACAGCTGGTAAGCATAATACCTTCCAAATTTGAAGGTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGACTTCATACTGTTTTATaGATTCTGGTATGCCAACGT +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRLHTVL*ILVCQR
Trigger: ACGTTGGCATACCAGAATGCATAAAACAGTATGAAG...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439052.5
CDS-3UTR CCA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTAGTAGTCTTGGGTTTTaGAAGATCATCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: KCIMNAETALLHQHILQSSSLGF*KIIFPL
Trigger: GAGTGGGAAGATGATCTTCCAAAACCCAAGACTACT...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGATTTCGAGCTAATAAATaGTCTTGTAACAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRFRANK*SCNSQK
Trigger: CTTCTGGCTGTTACAAGACCATTTATTAGCTCGAAA...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGATTCTTCAGTCTTGTTTaGACTAGATGCCAAACTTAC +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRFFSLV*TRCQTY
Trigger: GTAAGTTTGGCATCTAGTCCAAACAAGACTGAAGAA...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTGTAATCCAAGCATTTaGGAGGCTGAGACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPCNPSI*EAETGR
Trigger: TCTGCCTGTCTCAGCCTCCCAAATGCTTGGATTACA...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp ATCAACTTTTCCCCCTTCAATCCACAGTCTTTATTCACATACCTTGCGTATAGCTCCCTCTCAGATTTGTaGTCCATTTCTCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: INFSPFNPQSLFTYLAYSSLSDL*SISQMS
Trigger: GGACATTTGAGAAATGGACCACAAATCTGAGAGGGA...GCTATACGCAAGGTATGTGAATAAAGACTGTGGATTGAAGGGGGAAAAGTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp ATTGTCCATCAGGTATCTATAGTTAGGCTGACTACTTTCAGGCATGAAACAGACTTCATCCAAATCATCTaGCAATACAGAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: IVHQVSIVRLTTFRHETDFIQII*QYRAIT
Trigger: AGTGATGGCTCTGTATTGTCAGATGATTTGGATGAA...GTCTGTTTCATGCCTGAAAGTAGTCAGCCTAACTATAGATACCTGATGGACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448414.5
CDS-3UTR TCA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTCCAATAAATGCATTATaGATGCAGAAACAGCACTGC +
Preference number: 4 (lower is better)
Translates to: KCIMNAETALLHQHILQSPINAL*MQKQHC
Trigger: GCAGTGCTGTTTCTGCATTCATAATGCATTTATTGG...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTAAACCAGTACAGCAGTaGACAGTCCCTTGTATAATA +
Preference number: 4 (lower is better)
Translates to: KCIMNAETALLHQHILQSKPVQQ*TVPCII
Trigger: TATTATACAAGGGACTGTTCACTGCTGTACTGGTTT...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGAGGAAAATCTTCATCTTaGCATTCTTCTTTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRGKSSS*HSSLSS
Trigger: GGAACTTAAAGAAGAATGGCAAGATGAAGATTTTCC...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp ATGACCTTCAAATTTGGAAGGTATTATGCTTACCAGCTGTGTATGAGCCTTTCATTATGCATTCTGGTATaGCAACGTATTCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: MTFKFGRYYAYQLCMSLSLCILV*QRIPWG
Trigger: TCCCCATGGAATACGTTGGCATACCAGAATGCATAA...TGAAAGGCTCATACACAGCTGGTAAGCATAATACCTTCCAAATTTGAAGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGAGATCAACTTGTTTTATaGATTCTGGTATGCCAACGT +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGDQLVL*ILVCQR
Trigger: ACGTTGGCATACCAGAATGCATAAAACAAGTTGATC...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTACTTGTTTGGACTAGATaGCAAACTTACTGTTCATTT +
Preference number: 4 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLLVWTR*QTYCSF
Trigger: AAATGAACAGTAAGTTTGGCATCTAGTCCAAACAAG...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCATGCAGAAACAGCACTaGTCCATCAGCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPMQKQH*SISTFF
Trigger: GAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATGGAAAAAGTGTGCAATaGGCTTGCATCTGTACTTGC +
Preference number: 4 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHGKSVQ*ACICTC
Trigger: GCAAGTACAGATGCAAGCGCATTGCACACTTTTTCC...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTAGAAAGGAAAAAGTGTaGAATGCGCTTGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: KCIMNAETALLHQHILQSRKEKV*NALASV
Trigger: TACAGATGCAAGCGCATTGCACACTTTTTCCTTTCT...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATAACGTCTTCCCTTGGTaGTTGCTTAGGAGTATGATC +
Preference number: 4 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHNVFPW*LLRSMI
Trigger: GATCATACTCCTAAGCAAGCACCAAGGGAAGACGTT...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp TCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAACCTTGCGTATAGCCTaGAGGTTTTCCTGCTGCATA +
Preference number: 4 (lower is better)
Translates to: SRNLQTSTAVNSPLYNTKTLRIA*RFSCCI
Trigger: TATGCAGCAGGAAAACCTGCAGGCTATACGCAAGGT...TTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp ATGACCTTCAAATTTGGAAGGTATTATGCTTACCAGCTGTGTATGAGCCTTTCAACTGCTAACCTTCTCTaGTCGAACTTGCTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: MTFKFGRYYAYQLCMSLSTANLL*SNLLLY
Trigger: ATACAGAAGCAAGTTCGAGCAGAGAAGGTTAGCAGT...TGAAAGGCTCATACACAGCTGGTAAGCATAATACCTTCCAAATTTGAAGGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp CATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATTTCACATTAGTGACCACATTAATATCTTaGACACACAGACATCAGAAC +
Preference number: 4 (lower is better)
Translates to: HIHSGEQYPGHIAYFTLVTTLIS*THRHQN
Trigger: GTTCTGATGTCTGTGTGTGCAAGATATTAATGTGGT...CACTAATGTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTCATATCAACCCTGTaGTCCTGTTCTCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPFISTL*SCSPIL
Trigger: CAGGATTGGAGAACAGGACCACAGGGTTGATATGAA...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTCAGCAAACACAACAATaGCATTTAATCCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: KCIMNAETALLHQHILQSQQTQQ*HLIHPH
Trigger: ATGGGGATGGATTAAATGCCATTGTTGTGTTTGCTG...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATTGCCAACGTATTCCATaGGGACAAGTTCTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHCQRIP*GQVLLV
Trigger: AACTAGCAGAACTTGTCCCCATGGAATACGTTGGCA...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGATTGTTTTATGCATTCTaGTATGCCAACGTATTCCAT +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRLFYAF*YANVFH
Trigger: ATGGAATACGTTGGCATACCAGAATGCATAAAACAA...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp CATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATTTCACATTAGTGTTCTTCAGTCTTGTTTaGACTAGATGCCAAACTTAC +
Preference number: 4 (lower is better)
Translates to: HIHSGEQYPGHIAYFTLVFFSLV*TRCQTY
Trigger: GTAAGTTTGGCATCTAGTCCAAACAAGACTGAAGAA...CACTAATGTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGACATGACCTTCAAATTTaGAAGGTATTATGCTTACCA +
Preference number: 4 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRHDLQI*KVLCLP
Trigger: TGGTAAGCATAATACCTTCCAAATTTGAAGGTCATG...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp AATGCCTCTGCTAGACCCTACTTAGAATCATATTTCTTCATATCTCCCTCTGAGATCTCATCAGGAAACTaGCCTGTTCTATCTGATATG +
Preference number: 4 (lower is better)
Translates to: NASARPYLESYFFISPSEISSGN*PVLSDM
Trigger: CATATCAGATAGAACAGGCCAGTTTCCTGATGAGAT...CTCAGAGGGAGATATGAAGAAATATGATTCTAAGTAGGGTCTAGCAGAGGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp ATCAACTTTTCCCCCTTCAATCCACAGTCTTTATTCACATACCTTGCGTATAGCAATCATGACCAACTCTaGTATTTCTTACAGGGACCA +
Preference number: 4 (lower is better)
Translates to: INFSPFNPQSLFTYLAYSNHDQL*YFLQGP
Trigger: TGGTCCCTGTAAGAAATACCAGAGTTGGTCATGATT...GCTATACGCAAGGTATGTGAATAAAGACTGTGGATTGAAGGGGGAAAAGTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCCTTACCAGCTGTGTATaGGCCTTTCAAGTATATGAC +
Preference number: 4 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPLTSCV*AFQVYD
Trigger: GTCATATACTTGAAAGGCTCATACACAGCTGGTAAG...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp ATGACCTTCAAATTTGGAAGGTATTATGCTTACCAGCTGTGTATGAGCCTTTCAACTGGGTCTCACCATTaGTCTGATTCTAAGTTCATT +
Preference number: 4 (lower is better)
Translates to: MTFKFGRYYAYQLCMSLSTGSHH*SDSKFI
Trigger: AATGAACTTAGAATCAGATCAATGGTGAGACCCAGT...TGAAAGGCTCATACACAGCTGGTAAGCATAATACCTTCCAAATTTGAAGGTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp TTTTCCTCTGCTGCTGTGTATTCAGTAATTGAGCCTTTCCTAATTACTTCAGTATATCCTTCCAGGAAATaGCTTCCCACTCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: FSSAAVYSVIEPFLITSVYPSRK*LPTQTH
Trigger: ATGAGTTTGAGTGGGAAGTCATTTCCTGGAAGGATA...TACTGAAGTAATTAGGAAAGGCTCAATTACTGAATACACAGCAGCAGAGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448414.5
CDS-3UTR GCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGAGGAAAATCTTCATCTTaGCATTCTTCTTTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGGKSSS*HSSLSS
Trigger: GGAACTTAAAGAAGAATGGCAAGATGAAGATTTTCC...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp TCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAATGCAGAAACAGCACTaGTCCATCAGCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: SRNLQTSTAVNSPLYNTKMQKQH*SISTFF
Trigger: GAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT...TTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAAGGAAAAAGTGTGCAATaGGCTTGCATCTGTACTTGC +
Preference number: 4 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKGKSVQ*ACICTC
Trigger: GCAAGTACAGATGCAAGCGCATTGCACACTTTTTCC...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp ATGACCTTCAAATTTGGAAGGTATTATGCTTACCAGCTGTGTATGAGCCTTTCAAGAAAGGAAAAAGTGTaGAATGCGCTTGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: MTFKFGRYYAYQLCMSLSRKEKV*NALASV
Trigger: TACAGATGCAAGCGCATTGCACACTTTTTCCTTTCT...TGAAAGGCTCATACACAGCTGGTAAGCATAATACCTTCCAAATTTGAAGGTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATCAGATTCCATTAAGGTaGAGGTTAAAGCAGGTATCC +
Preference number: 4 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHQIPLR*RLKQVS
Trigger: GGATACCTGCTTTAACCTGCACCTTAATGGAATCTG...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATGCCTGCAGGTTTTCCTaGTGCATACAAGAAATGTTA +
Preference number: 4 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHACRFS*CIQEML
Trigger: TAACATTTCTTGTATGCAGCAGGAAAACCTGCAGGC...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGGCAGAGGGGGATGCTTaGCAGGTAATTCTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMAEGDA*QVILLY
Trigger: ATACAAAAGAATTACCTGGCAAGCATCCCCCTCTGC...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp TATTCAGTAATTGAGCCTTTCCTAATTACTTCAGTAGTCTTGGGTTTTGGAAGAGAGGGGGAAACCTACTaGATGTTAGTTGTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: YSVIEPFLITSVVLGFGREGETY*MLVVSK
Trigger: CTTGGAAACAACTAACATGCAGTAGGTTTCCCCCTC...TCTTCCAAAACCCAAGACTACTGAAGTAATTAGGAAAGGCTCAATTACTGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448414.5
CDS-3UTR CCA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCAGTAGTCTTGGGTTTTaGAAGATCATCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPSSLGF*KIIFPL
Trigger: GAGTGGGAAGATGATCTTCCAAAACCCAAGACTACT...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAATGCCAACGTATTCCATaGGGACAAGTTCTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKCQRIP*GQVLLV
Trigger: AACTAGCAGAACTTGTCCCCATGGAATACGTTGGCA...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGTGCCAACGTATTCCATaGGGACAAGTTCTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMCQRIP*GQVLLV
Trigger: AACTAGCAGAACTTGTCCCCATGGAATACGTTGGCA...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGATTGTTTTATGCATTCTaGTATGCCAACGTATTCCAT +
Preference number: 4 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGLFYAF*YANVFH
Trigger: ATGGAATACGTTGGCATACCAGAATGCATAAAACAA...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTTCTTCAGTCTTGTTTaGACTAGATGCCAAACTTAC +
Preference number: 4 (lower is better)
Translates to: KCIMNAETALLHQHILQSFFSLV*TRCQTY
Trigger: GTAAGTTTGGCATCTAGTCCAAACAAGACTGAAGAA...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGAGGGGAGCAATACCCTaGACACATAGCTTATTTCAC +
Preference number: 4 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMRGAIP*THSLFH
Trigger: GTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCT...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTCCCTCTCAGATTTGTaGTCCATTTCTCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPSLSDL*SISQMS
Trigger: GGACATTTGAGAAATGGACCACAAATCTGAGAGGGA...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCTGTTTTATGCATTCTaGTATGCCAACGTATTCCAT +
Preference number: 4 (lower is better)
Translates to: ANKCIMNAETALLHQHILLFYAF*YANVFH
Trigger: ATGGAATACGTTGGCATACCAGAATGCATAAAACAG...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439052.5
CDS-3UTR TCA 90 bp TCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGACTACTTTCAGGCATaGAACAGACAGCAAACACAA +
Preference number: 4 (lower is better)
Translates to: SRNLQTSTAVNSPLYNTKDYFQA*NRQQTQ
Trigger: TTGTGTTTGCTGTCTGTTTCATGCCTGAAAGTAGTC...TTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCCCAATAAATGCATTATaGATGCAGAAACAGCACTGC +
Preference number: 4 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPPINAL*MQKQHC
Trigger: GCAGTGCTGTTTCTGCATTCATAATGCATTTATTGG...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGTGGAAAAAGGAAGGATaGACCTACCGTAACATCTCT +
Preference number: 4 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMWKKEG*TYRNIS
Trigger: AGAGATGTTACGGTAGGTTCATCCTTCCTTTTTCCA...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTGGAAAATCTTCATCTTaGCATTCTTCTTTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ANKCIMNAETALLHQHILGKSSS*HSSLSS
Trigger: GGAACTTAAAGAAGAATGGCAAGATGAAGATTTTCC...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp TCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAATTATGCATTCTGGTATaGCAACGTATTCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: SRNLQTSTAVNSPLYNTKLCILV*QRIPWG
Trigger: TCCCCATGGAATACGTTGGCATACCAGAATGCATAA...TTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp AATGCCTCTGCTAGACCCTACTTAGAATCATATTTCTTCATATCTCCCTCTGAGCTTGTTTGGACTAGATaGCAAACTTACTGTTCATTT +
Preference number: 4 (lower is better)
Translates to: NASARPYLESYFFISPSELVWTR*QTYCSF
Trigger: AAATGAACAGTAAGTTTGGCATCTAGTCCAAACAAG...CTCAGAGGGAGATATGAAGAAATATGATTCTAAGTAGGGTCTAGCAGAGGCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCTTGTTTGGACTAGATaGCAAACTTACTGTTCATTT +
Preference number: 4 (lower is better)
Translates to: ANKCIMNAETALLHQHILLVWTR*QTYCSF
Trigger: AAATGAACAGTAAGTTTGGCATCTAGTCCAAACAAG...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAACAGATTCCATTAAGGTaGAGGTTAAAGCAGGTATCC +
Preference number: 4 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKQIPLR*RLKQVS
Trigger: GGATACCTGCTTTAACCTGCACCTTAATGGAATCTG...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTGCAGGTTTTCCTGCTaGATACAAGAAATGTTACCA +
Preference number: 4 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPCRFSC*IQEMLP
Trigger: TGGTAACATTTCTTGTATGCAGCAGGAAAACCTGCA...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTTTGTTTTATGCATTCTaGTATGCCAACGTATTCCAT +
Preference number: 4 (lower is better)
Translates to: ANKCIMNAETALLHQHILLFYAF*YANVFH
Trigger: ATGGAATACGTTGGCATACCAGAATGCATAAAACAA...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCAATCATGACCAACTCTaGTATTTCTTACAGGGACCA +
Preference number: 4 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPNHDQL*YFLQGP
Trigger: TGGTCCCTGTAAGAAATACCAGAGTTGGTCATGATT...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp TCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAATTCATCCAAATCATCTaGCAATACAGAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: SRNLQTSTAVNSPLYNTKFIQII*QYRAIT
Trigger: AGTGATGGCTCTGTATTGTCAGATGATTTGGATGAA...TTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp TCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAAAACCAGTACAGCAGTaGACAGTCCCTTGTATAATA +
Preference number: 4 (lower is better)
Translates to: SRNLQTSTAVNSPLYNTKKPVQQ*TVPCII
Trigger: TATTATACAAGGGACTGTTCACTGCTGTACTGGTTT...TTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR TCA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCATCCCTTTAGTTTACTaGTTCACAGCACCTCATTTT +
Preference number: 4 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPIPLVY*FTAPHF
Trigger: AAAATGAGGTGCTGTGAATCAGTAAACTAAAGGGAT...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGACTACACAATTCCTATaGCCTATAACAAGACCAGAC +
Preference number: 4 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMTTQFL*PITRPD
Trigger: GTCTGGTCTTGTTATAGGTCATAGGAATTGTGTAGT...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAAACTGGGTCTCACCATTaGTCTGATTCTAAGTTCATT +
Preference number: 4 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKTGSHH*SDSKFI
Trigger: AATGAACTTAGAATCAGATCAATGGTGAGACCCAGT...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR TCA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATCTCCTTAGTAAATCATaGCCAACTCTGGTATTTCTT +
Preference number: 4 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHLLSKS*PTLVFL
Trigger: AAGAAATACCAGAGTTGGTCATGATTTACTAAGGAG...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCGATCAACTTGTTTTATaGATTCTGGTATGCCAACGT +
Preference number: 4 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPDQLVL*ILVCQR
Trigger: ACGTTGGCATACCAGAATGCATAAAACAAGTTGATC...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp ATGACCTTCAAATTTGGAAGGTATTATGCTTACCAGCTGTGTATGAGCCTTTCACTACAGATATATGCTTaGCAATCAGCATATTTCAGT +
Preference number: 4 (lower is better)
Translates to: MTFKFGRYYAYQLCMSLSLQIYA*QSAYFS
Trigger: ACTGAAATATGCTGATTGGCAAGCATATATCTGTAG...TGAAAGGCTCATACACAGCTGGTAAGCATAATACCTTCCAAATTTGAAGGTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATTTTCGAGCTAATAAATaGTCTTGTAACAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHFRANK*SCNSQK
Trigger: CTTCTGGCTGTTACAAGACCATTTATTAGCTCGAAA...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATTTCTTCAGTCTTGTTTaGACTAGATGCCAAACTTAC +
Preference number: 4 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHFFSLV*TRCQTY
Trigger: GTAAGTTTGGCATCTAGTCCAAACAAGACTGAAGAA...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp TCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAATCTCATCAGGAAACTaGCCTGTTCTATCTGATATG +
Preference number: 4 (lower is better)
Translates to: SRNLQTSTAVNSPLYNTKISSGN*PVLSDM
Trigger: CATATCAGATAGAACAGGCCAGTTTCCTGATGAGAT...TTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGTTTATAGGGTTCAATTaGCTTCATATCAACCCTGTG +
Preference number: 4 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMFIGFN*LHINPV
Trigger: CACAGGGTTGATATGAAGGCAATTGAACCCTATAAA...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGGATCAACTTGTTTTATaGATTCTGGTATGCCAACGT +
Preference number: 4 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMDQLVL*ILVCQR
Trigger: ACGTTGGCATACCAGAATGCATAAAACAAGTTGATC...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp TCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGATCAACTTGTTTTATaGATTCTGGTATGCCAACGT +
Preference number: 4 (lower is better)
Translates to: SRNLQTSTAVNSPLYNTKDQLVL*ILVCQR
Trigger: ACGTTGGCATACCAGAATGCATAAAACAAGTTGATC...TTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATCTTGTTTGGACTAGATaGCAAACTTACTGTTCATTT +
Preference number: 4 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHLVWTR*QTYCSF
Trigger: AAATGAACAGTAAGTTTGGCATCTAGTCCAAACAAG...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR GCA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATCTACAGATATATGCTTaGCAATCAGCATATTTCAGT +
Preference number: 4 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHLQIYA*QSAYFS
Trigger: ACTGAAATATGCTGATTGGCAAGCATATATCTGTAG...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAAACCACATTAATATCTTaGACACACAGACATCAGAAC +
Preference number: 4 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKTTLIS*THRHQN
Trigger: GTTCTGATGTCTGTGTGTGCAAGATATTAATGTGGT...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAATTTCGAGCTAATAAATaGTCTTGTAACAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKFRANK*SCNSQK
Trigger: CTTCTGGCTGTTACAAGACCATTTATTAGCTCGAAA...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CCA 90 bp TCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAATTTCGAGCTAATAAATaGTCTTGTAACAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SRNLQTSTAVNSPLYNTKFRANK*SCNSQK
Trigger: CTTCTGGCTGTTACAAGACCATTTATTAGCTCGAAA...TTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
3UTR CAA 72 bp AGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTaGTATAATACAAAAGTCCATTATGAAAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: RNLQTSTAVNSP*YNTKVHYEKVK
Trigger: CTTGACTTTTTCATAATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
3UTR CAA 72 bp GATTCTAAGACATCCTACAAGCCTAGTATCATTAATTaGAAAGCACGAAATGATTTTCATTTGGTGCTTACG +
Preference number: 4 (lower is better)
Translates to: DSKTSYKPSIIN*KARNDFHLVLT
Trigger: CGTAAGCACCAAATGAAAATCATTTCGTGCTTTCAAATTAATGATACTAGGCTTGTAGGATGTCTTAGAATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR GCA 90 bp TCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAACTTGTTTGGACTAGATaGCAAACTTACTGTTCATTT +
Preference number: 4 (lower is better)
Translates to: SRNLQTSTAVNSPLYNTKLVWTR*QTYCSF
Trigger: AAATGAACAGTAAGTTTGGCATCTAGTCCAAACAAG...TTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGTTGTTTTATGCATTCTaGTATGCCAACGTATTCCAT +
Preference number: 4 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMLFYAF*YANVFH
Trigger: ATGGAATACGTTGGCATACCAGAATGCATAAAACAA...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CCA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAACATGACCTTCAAATTTaGAAGGTATTATGCTTACCA +
Preference number: 4 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKHDLQI*KVLCLP
Trigger: TGGTAAGCATAATACCTTCCAAATTTGAAGGTCATG...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS CCA 90 bp GACCTCCTCCGGGCGCGGCAGCCGGCGGTGGAGGCGGCGGGGGCGTaGCGGCGGCGGAGGCGTGGCGTCTTCTTGAAACCCACACAGCAT +
Preference number: 5 (lower is better)
Translates to: DLLRARQPAVEAAGA*RRRRRGVFLKPTQH
Trigger: ATGCTGTGTGGGTTTCAAGAAGACGCCACGCCTCCGCCGCCGCCACGCCCCCGCCGCCTCCACCGCCGGCTGCCGCGCCCGGAGGAGGTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000612191.4
CDS CCA 90 bp GGAAGTGATAACATCCCGACCTCCTCCGGGCGCGGCAGCCGGCGGTaGAGGCGGCGGGGGCGTGGCGGCGGCGGAGGCGTGGCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: GSDNIPTSSGRGSRR*RRRGRGGGGGVASS
Trigger: AGAAGACGCCACGCCTCCGCCGCCGCCACGCCCCCGCCGCCTCCACCGCCGGCTGCCGCGCCCGGAGGAGGTCGGGATGTTATCACTTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000612191.4
CDS TCA 90 bp GCCGCAGCGGTACGGCGTCGGCGGCAGCAGCTGACCCGGACACAGTaGGAAGCCCCGGCGGAAGTGATAACATCCCGACCTCCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: AAAVRRRRQQLTRTQ*EAPAEVITSRPPPG
Trigger: GCCCGGAGGAGGTCGGGATGTTATCACTTCCGCCGGGGCTTCTCACTGTGTCCGGGTCAGCTGCTGCCGCCGACGCCGTACCGCTGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000612191.4
CDS TCA 90 bp CAAGTTTCTTTGTTCTGTACCAGGACGGACGCTGGTCATAAATACTaGACCATCGTAGCCCAGCCACTTCACCCACACCAGGGTAAAAGG +
Preference number: 5 (lower is better)
Translates to: QVSLFCTRTDAGHKY*TIVAQPLHPHQGKR
Trigger: CCTTTTACCCTGGTGTGGGTGAAGTGGCTGGGCTACGATGGTTCAGTATTTATGACCAGCGTCCGTCCTGGTACAGAACAAAGAAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415213.7
CDS-3UTR CAA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGAAGGCGTGGCGTCTTCTaGAAACCCACACAGCATCCC +
Preference number: 5 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRRRGVF*KPTQHP
Trigger: GGGATGCTGTGTGGGTTTCAAGAAGACGCCACGCCT...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000612191.4
CDS-3UTR CAA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCGGCAGAGGGGGATGCTaGCCAGGTAATTCTTTTGTA +
Preference number: 5 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCGRGGC*PGNSFV
Trigger: TACAAAAGAATTACCTGGCAAGCATCCCCCTCTGCC...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCACCTTACAGGAAGGGTaGAAGAGTAGCCATGACCTT +
Preference number: 5 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCTLQEG*KSSHDL
Trigger: AAGGTCATGGCTACTCTTCAACCCTTCCTGTAAGGT...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGAGTCTTCCCTTGGTGCTaGCTTAGGAGTATGATCAAG +
Preference number: 5 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRVFPWC*LRSMIK
Trigger: CTTGATCATACTCCTAAGCAAGCACCAAGGGAAGAC...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCACTTCCCTCACCAGTaGGCCTTCCCATTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: ANKCIMNAETALLHQHILHFPHQ*AFPFKS
Trigger: AGACTTGAATGGGAAGGCCAACTGGTGAGGGAAGTG...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGAGGCGTGGCGTCTTCTaGAAACCCACACAGCATCCC +
Preference number: 5 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMRRGVF*KPTQHP
Trigger: GGGATGCTGTGTGGGTTTCAAGAAGACGCCACGCCT...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000612191.4
CDS-3UTR CAA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGACTTCTCTGCTCGAACTaGCTTCTGTATGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRLLCSN*LLYEET
Trigger: TGTCTCTTCATACAGAAGCAAGTTCGAGCAGAGAAG...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTGGCAGAGGGGGATGCTaGCCAGGTAATTCTTTTGTA +
Preference number: 5 (lower is better)
Translates to: KCIMNAETALLHQHILQSGRGGC*PGNSFV
Trigger: TACAAAAGAATTACCTGGCAAGCATCCCCCTCTGCC...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp CATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATTTCACATTAGTGAAGTGTGCAATGCGCTaGCATCTGTACTTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: HIHSGEQYPGHIAYFTLVKCAMR*HLYLLN
Trigger: ATTCAGCAAGTACAGATGCAAGCGCATTGCACACTT...CACTAATGTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTACCTTACAGGAAGGGTaGAAGAGTAGCCATGACCTT +
Preference number: 5 (lower is better)
Translates to: KCIMNAETALLHQHILQSTLQEG*KSSHDL
Trigger: AAGGTCATGGCTACTCTTCAACCCTTCCTGTAAGGT...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp AATGCCTCTGCTAGACCCTACTTAGAATCATATTTCTTCATATCTCCCTCTGAGGTCTTCCCTTGGTGCTaGCTTAGGAGTATGATCAAG +
Preference number: 5 (lower is better)
Translates to: NASARPYLESYFFISPSEVFPWC*LRSMIK
Trigger: CTTGATCATACTCCTAAGCAAGCACCAAGGGAAGAC...CTCAGAGGGAGATATGAAGAAATATGATTCTAAGTAGGGTCTAGCAGAGGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGACCTACTCCCATTTGCTaGAGCAAGTTTAACACTTCT +
Preference number: 5 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRPTPIC*SKFNTS
Trigger: AGAAGTGTTAAACTTGCTCAAGCAAATGGGAGTAGG...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCCACTTCCCTCACCAGTaGGCCTTCCCATTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPHFPHQ*AFPFKS
Trigger: AGACTTGAATGGGAAGGCCAACTGGTGAGGGAAGTG...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCGACCACATTAATATCTaGCACACACAGACATCAGAA +
Preference number: 5 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCDHINI*HTQTSE
Trigger: TTCTGATGTCTGTGTGTGCAAGATATTAATGTGGTC...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTGAAGTCCAAGTTTCTTaGTTCTGTACCAGGACGGAC +
Preference number: 5 (lower is better)
Translates to: KCIMNAETALLHQHILQSEVQVS*FCTRTD
Trigger: GTCCGTCCTGGTACAGAACAAAGAAACTTGGACTTC...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415213.7
CDS-3UTR CAA 90 bp AATACTACTCAGCACTCATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTTTATAGGGTTCAATaGCCTTCATATCAACCCTGT +
Preference number: 5 (lower is better)
Translates to: NTTQHSYTLRGAIPWTHSFYRVQ*PSYQPC
Trigger: ACAGGGTTGATATGAAGGCAATTGAACCCTATAAAA...GCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATGAGTGCTGAGTAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGAGCAGTGAACAGTCCCTaGTATAATACAAAAGTCCAT +
Preference number: 5 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRAVNSP*YNTKVH
Trigger: ATGGACTTTTGTATTATACAAGGGACTGTTCACTGC...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTAAGTGTGCAATGCGCTaGCATCTGTACTTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: ANKCIMNAETALLHQHILKCAMR*HLYLLN
Trigger: ATTCAGCAAGTACAGATGCAAGCGCATTGCACACTT...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp CATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATTTCACATTAGTGCTTTATTCACATACCTaGCGTATAGCCTGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: HIHSGEQYPGHIAYFTLVLYSHT*RIACRF
Trigger: AAACCTGCAGGCTATACGCAAGGTATGTGAATAAAG...CACTAATGTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGAGCTACAGATATATGCTaGCCAATCAGCATATTTCAG +
Preference number: 5 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRATDIC*PISIFQ
Trigger: CTGAAATATGCTGATTGGCAAGCATATATCTGTAGC...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp CATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATTTCACATTAGTGCTATCCCTCTCAGATTaGTGGTCCATTTCTCAAATG +
Preference number: 5 (lower is better)
Translates to: HIHSGEQYPGHIAYFTLVLSLSD*WSISQM
Trigger: CATTTGAGAAATGGACCACAAATCTGAGAGGGATAG...CACTAATGTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp ATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTGCAGGTTTTCCTGCTGCCGAAATGATTTTCATTaGGTGCTTACGTGCTTTATG +
Preference number: 5 (lower is better)
Translates to: IHSLYSHTLRIACRFSCCRNDFH*VLTCFM
Trigger: CATAAAGCACGTAAGCACCAAATGAAAATCATTTCG...GCAGCAGGAAAACCTGCAGGCTATACGCAAGGTATGTGAATAAAGACTGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS CCA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTaGACTAGATGCCAAACTTACTGTTCATTTTTCGGTTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: MQKQHCSISTFFSLV*TRCQTYCSFFGSSC
Trigger: ACAAGATGAACCGAAAAATGAACAGTAAGTTTGGCATCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000478981.1
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTGTCAACTACAAACTCTaGATAATCCAGGGAGCCAAT +
Preference number: 5 (lower is better)
Translates to: KCIMNAETALLHQHILQSVNYKL*IIQGAN
Trigger: ATTGGCTCCCTGGATTATCAAGAGTTTGTAGTTGAC...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp ATCAACTTTTCCCCCTTCAATCCACAGTCTTTATTCACATACCTTGCGTATAGCGTCAACTACAAACTCTaGATAATCCAGGGAGCCAAT +
Preference number: 5 (lower is better)
Translates to: INFSPFNPQSLFTYLAYSVNYKL*IIQGAN
Trigger: ATTGGCTCCCTGGATTATCAAGAGTTTGTAGTTGAC...GCTATACGCAAGGTATGTGAATAAAGACTGTGGATTGAAGGGGGAAAAGTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTACGGAAAATCTTCATCTaGCCATTCTTCTTTAAGTTC +
Preference number: 5 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLRKIFI*PFFFKF
Trigger: GAACTTAAAGAAGAATGGCAAGATGAAGATTTTCCG...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGATTTTATAGGGTTCAATaGCCTTCATATCAACCCTGT +
Preference number: 5 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRFYRVQ*PSYQPC
Trigger: ACAGGGTTGATATGAAGGCAATTGAACCCTATAAAA...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp AATAGTGCTCCAAGGGCTGTGCAAGTCAGTGGCCCTGAACATCATCAATATTTATTTTATAGGGTTCAATaGCCTTCATATCAACCCTGT +
Preference number: 5 (lower is better)
Translates to: NSAPRAVQVSGPEHHQYLFYRVQ*PSYQPC
Trigger: ACAGGGTTGATATGAAGGCAATTGAACCCTATAAAA...TAAATATTGATGATGTTCAGGGCCACTGACTTGCACAGCCCTTGGAGCACTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGAGCAGTGAACAGTCCCTaGTATAATACAAAAGTCCAT +
Preference number: 5 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGAVNSP*YNTKVH
Trigger: ATGGACTTTTGTATTATACAAGGGACTGTTCACTGC...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp ATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGACTAAATTCAAGAAATTaGCAAACCAGTACAGCAGTG +
Preference number: 5 (lower is better)
Translates to: MQKQHCSISTFFSLVWTRLNSRN*QTSTAV
Trigger: CACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAG...TCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp ATCAACTTTTCCCCCTTCAATCCACAGTCTTTATTCACATACCTTGCGTATAGCCTTTATTCACATACCTaGCGTATAGCCTGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: INFSPFNPQSLFTYLAYSLYSHT*RIACRF
Trigger: AAACCTGCAGGCTATACGCAAGGTATGTGAATAAAG...GCTATACGCAAGGTATGTGAATAAAGACTGTGGATTGAAGGGGGAAAAGTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp AATGCCTCTGCTAGACCCTACTTAGAATCATATTTCTTCATATCTCCCTCTGAGCTATCCCTCTCAGATTaGTGGTCCATTTCTCAAATG +
Preference number: 5 (lower is better)
Translates to: NASARPYLESYFFISPSELSLSD*WSISQM
Trigger: CATTTGAGAAATGGACCACAAATCTGAGAGGGATAG...CTCAGAGGGAGATATGAAGAAATATGATTCTAAGTAGGGTCTAGCAGAGGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS GCA 90 bp CAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAGATaGCAAACTTACTGTTCATTTTTCGGTTCATCTTGTTTTCCATTA +
Preference number: 5 (lower is better)
Translates to: QHCSISTFFSLVWTR*QTYCSFFGSSCFPL
Trigger: TAATGGAAAACAAGATGAACCGAAAAATGAACAGTAAGTTTGGCATCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000478981.1
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp CATATACACTCAGGGGAGCAATACCCTGGACACATAGCTTATTTCACATTAGTGCGGAAAATCTTCATCTaGCCATTCTTCTTTAAGTTC +
Preference number: 5 (lower is better)
Translates to: HIHSGEQYPGHIAYFTLVRKIFI*PFFFKF
Trigger: GAACTTAAAGAAGAATGGCAAGATGAAGATTTTCCG...CACTAATGTGAAATAAGCTATGTGTCCAGGGTATTGCTCCCCTGAGTGTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267859.8
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGAATTACTTCAGTAGTCTaGGGTTTTGGAAGATCATCT +
Preference number: 5 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGITSVV*GFGRSS
Trigger: AGATGATCTTCCAAAACCCAAGACTACTGAAGTAAT...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTGCAGTGAACAGTCCCTaGTATAATACAAAAGTCCAT +
Preference number: 5 (lower is better)
Translates to: KCIMNAETALLHQHILQSAVNSP*YNTKVH
Trigger: ATGGACTTTTGTATTATACAAGGGACTGTTCACTGC...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGACTAAATTCAAGAAATTaGCAAACCAGTACAGCAGTG +
Preference number: 5 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGLNSRN*QTSTAV
Trigger: CACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAG...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCAAGTGTGCAATGCGCTaGCATCTGTACTTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPKCAMR*HLYLLN
Trigger: ATTCAGCAAGTACAGATGCAAGCGCATTGCACACTT...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTTGTTTGGAGAAGGAATGCCTAACTaGTTATTGTTAGTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: YECRNSTAPSAHSSVLFGEGMPN*LLLVCF
Trigger: GAAGCAAACTAACAATAACAAGTTAGGCATTCCTTC...TCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATGTCAACTACAAACTCTaGATAATCCAGGGAGCCAAT +
Preference number: 5 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHVNYKL*IIQGAN
Trigger: ATTGGCTCCCTGGATTATCAAGAGTTTGTAGTTGAC...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTATTACTTCAGTAGTCTaGGGTTTTGGAAGATCATCT +
Preference number: 5 (lower is better)
Translates to: KCIMNAETALLHQHILQSITSVV*GFGRSS
Trigger: AGATGATCTTCCAAAACCCAAGACTACTGAAGTAAT...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTCTAAATTCAAGAAATTaGCAAACCAGTACAGCAGTG +
Preference number: 5 (lower is better)
Translates to: KCIMNAETALLHQHILQSLNSRN*QTSTAV
Trigger: CACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAG...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp AATGCCTCTGCTAGACCCTACTTAGAATCATATTTCTTCATATCTCCCTCTGAGCGCTTGCATCTGTACTaGCTGAATTATGAAACAAAT +
Preference number: 5 (lower is better)
Translates to: NASARPYLESYFFISPSERLHLY*LNYETN
Trigger: ATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCG...CTCAGAGGGAGATATGAAGAAATATGATTCTAAGTAGGGTCTAGCAGAGGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp AAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTCGCTTGCATCTGTACTaGCTGAATTATGAAACAAAT +
Preference number: 5 (lower is better)
Translates to: KCIMNAETALLHQHILQSRLHLY*LNYETN
Trigger: ATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCG...AGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp GCCAATAAATGCATTATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCGCTTGCATCTGTACTaGCTGAATTATGAAACAAAT +
Preference number: 5 (lower is better)
Translates to: ANKCIMNAETALLHQHILRLHLY*LNYETN
Trigger: ATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCG...AAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATAATGCATTTATTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp TCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAACTTCTCTGCTCGAACTaGCTTCTGTATGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: SRNLQTSTAVNSPLYNTKLLCSN*LLYEET
Trigger: TGTCTCTTCATACAGAAGCAAGTTCGAGCAGAGAAG...TTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp GCTGCTGTGTATTCAGTAATTGAGCCTTTCCTAATTACTTCAGTAGTCTTGGGTATTACTTCAGTAGTCTaGGGTTTTGGAAGATCATCA +
Preference number: 5 (lower is better)
Translates to: AAVYSVIEPFLITSVVLGITSVV*GFGRSS
Trigger: TGATGATCTTCCAAAACCCAAGACTACTGAAGTAAT...ACCCAAGACTACTGAAGTAATTAGGAAAGGCTCAATTACTGAATACACAGCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448414.5
CDS-3UTR CAA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCGCAGTGAACAGTCCCTaGTATAATACAAAAGTCCAT +
Preference number: 5 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPAVNSP*YNTKVH
Trigger: ATGGACTTTTGTATTATACAAGGGACTGTTCACTGC...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp ATGACCTTCAAATTTGGAAGGTATTATGCTTACCAGCTGTGTATGAGCCTTTCACAAGCAATAATCGTTTaGGCTCAATTCACTGTAATG +
Preference number: 5 (lower is better)
Translates to: MTFKFGRYYAYQLCMSLSQAIIV*AQFTVM
Trigger: CATTACAGTGAATTGAGCCAAAACGATTATTGCTTG...TGAAAGGCTCATACACAGCTGGTAAGCATAATACCTTCCAAATTTGAAGGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATGCTACAGATATATGCTaGCCAATCAGCATATTTCAG +
Preference number: 5 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHATDIC*PISIFQ
Trigger: CTGAAATATGCTGATTGGCAAGCATATATCTGTAGC...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp CATCACTTTTGCAACATGTATCTACAGTTAGGAGCAATGACTGCAAAATCAAAACCTACTCCCATTTGCTaGAGCAAGTTTAACACTTCT +
Preference number: 5 (lower is better)
Translates to: HHFCNMYLQLGAMTAKSKPTPIC*SKFNTS
Trigger: AGAAGTGTTAAACTTGCTCAAGCAAATGGGAGTAGG...TTTTGATTTTGCAGTCATTGCTCCTAACTGTAGATACATGTTGCAAAAGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCCGGAAAATCTTCATCTaGCCATTCTTCTTTAAGTTC +
Preference number: 5 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPRKIFI*PFFFKF
Trigger: GAACTTAAAGAAGAATGGCAAGATGAAGATTTTCCG...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATCGGAAAATCTTCATCTaGCCATTCTTCTTTAAGTTC +
Preference number: 5 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHRKIFI*PFFFKF
Trigger: GAACTTAAAGAAGAATGGCAAGATGAAGATTTTCCG...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCATTACTTCAGTAGTCTaGGGTTTTGGAAGATCATCT +
Preference number: 5 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPITSVV*GFGRSS
Trigger: AGATGATCTTCCAAAACCCAAGACTACTGAAGTAAT...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATTTTTATAGGGTTCAATaGCCTTCATATCAACCCTGT +
Preference number: 5 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHFYRVQ*PSYQPC
Trigger: ACAGGGTTGATATGAAGGCAATTGAACCCTATAAAA...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp TTTTCCTCTGCTGCTGTGTATTCAGTAATTGAGCCTTTCCTAATTACTTCAGTATTTTATAGGGTTCAATaGCCTTCATATCAACCCTGT +
Preference number: 5 (lower is better)
Translates to: FSSAAVYSVIEPFLITSVFYRVQ*PSYQPC
Trigger: ACAGGGTTGATATGAAGGCAATTGAACCCTATAAAA...TACTGAAGTAATTAGGAAAGGCTCAATTACTGAATACACAGCAGCAGAGGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448414.5
CDS-3UTR CAA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATCTAAATTCAAGAAATTaGCAAACCAGTACAGCAGTG +
Preference number: 5 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHLNSRN*QTSTAV
Trigger: CACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAG...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp AATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAAGTCCATCAAGCAATAATCGTTTaGGCTCAATTCACTGTAATG +
Preference number: 5 (lower is better)
Translates to: NLQTSTAVNSPLYNTKVHQAIIV*AQFTVM
Trigger: CATTACAGTGAATTGAGCCAAAACGATTATTGCTTG...ATGGACTTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp ATTAAAGAGCTAAATTCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCCGAAATGATTTTCATTaGGTGCTTACGTGCTTTATG +
Preference number: 5 (lower is better)
Translates to: IKELNSRNLQTSTAVNSPRNDFH*VLTCFM
Trigger: CATAAAGCACGTAAGCACCAAATGAAAATCATTTCG...GGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAGCTCTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGGACCACATTAATATCTaGCACACACAGACATCAGAA +
Preference number: 5 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMDHINI*HTQTSE
Trigger: TTCTGATGTCTGTGTGTGCAAGATATTAATGTGGTC...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS-3UTR CAA 90 bp TCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAACTAAATTCAAGAAATTaGCAAACCAGTACAGCAGTG +
Preference number: 5 (lower is better)
Translates to: SRNLQTSTAVNSPLYNTKLNSRN*QTSTAV
Trigger: CACTGCTGTACTGGTTTGCAAATTTCTTGAATTTAG...TTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp TCAAGAAATTTGCAAACCAGTACAGCAGTGAACAGTCCCTTGTATAATACAAAACGCTTGCATCTGTACTaGCTGAATTATGAAACAAAT +
Preference number: 5 (lower is better)
Translates to: SRNLQTSTAVNSPLYNTKRLHLY*LNYETN
Trigger: ATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCG...TTTTGTATTATACAAGGGACTGTTCACTGCTGTACTGGTTTGCAAATTTCTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267859.8
ENST00000439052.5
ENST00000607373.6
ENST00000612191.4
CDS-3UTR CAA 90 bp AAAAAGTGTGCAATGCGCTTGCATCTGTACTTGCTGAATTATGAAACAAATATGGAAGGAATGCCTAACTaGTTATTGTTAGTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: KKCAMRLHLYLLNYETNMEGMPN*LLLVCF
Trigger: GAAGCAAACTAACAATAACAAGTTAGGCATTCCTTC...CATATTTGTTTCATAATTCAGCAAGTACAGATGCAAGCGCATTGCACACTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000607373.6
CDS GCA 72 bp CAACCCCCTCAGACGTCACGGGCTAGCGCTCGCGCCTaGACTCGCGGGGTCGGCCTTCCTTGCCTGTGGGCG +
Preference number: 6 (lower is better)
Translates to: QPPQTSRASARA*TRGVGLPCLWA
Trigger: CGCCCACAGGCAAGGAAGGCCGACCCCGCGAGTGCAGGCGCGAGCGCTAGCCCGTGACGTCTGAGGGGGTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267859.8
CDS TCA 72 bp GTACGGCGTCGGCGGCAGCAGCTGACCCGGACACAGTaGGAAGCCCCGGCGGAAGTGATAACATCCCGACCT +
Preference number: 6 (lower is better)
Translates to: VRRRRQQLTRTQ*EAPAEVITSRP
Trigger: AGGTCGGGATGTTATCACTTCCGCCGGGGCTTCTCACTGTGTCCGGGTCAGCTGCTGCCGCCGACGCCGTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267859.8
ENST00000612191.4
CDS CAA 90 bp CACACCTTCCATCCTCAGCCTGGATTCAATGTCAACTACAAACTCTaGATAATCCAGGGAGCCAATGTCCCCGGAGGAAGCCTTGGCCCC +
Preference number: 6 (lower is better)
Translates to: HTFHPQPGFNVNYKL*IIQGANVPGGSLGP
Trigger: GGGGCCAAGGCTTCCTCCGGGGACATTGGCTCCCTGGATTATCAAGAGTTTGTAGTTGACATTGAATCCAGGCTGAGGATGGAAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267859.8
ENST00000417312.5
ENST00000477543.1
ENST00000560458.5
ENST00000607373.6
ENST00000612191.4
CDS TCA 72 bp TTGTTCTGTACCAGGACGGACGCTGGTCATAAATACTaGACCATCGTAGCCCAGCCACTTCACCCACACCAG +
Preference number: 6 (lower is better)
Translates to: LFCTRTDAGHKY*TIVAQPLHPHQ
Trigger: CTGGTGTGGGTGAAGTGGCTGGGCTACGATGGTTCAGTATTTATGACCAGCGTCCGTCCTGGTACAGAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415213.7
CDS CAA 72 bp CATCCTCAGCCTGGATTCAATGTCAACTACAAACTCTaGATAATCCAGGGAGCCAATGTCCCCGGAGGAAGC +
Preference number: 6 (lower is better)
Translates to: HPQPGFNVNYKL*IIQGANVPGGS
Trigger: GCTTCCTCCGGGGACATTGGCTCCCTGGATTATCAAGAGTTTGTAGTTGACATTGAATCCAGGCTGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267859.8
ENST00000417312.5
ENST00000477543.1
ENST00000560458.5
ENST00000607373.6
ENST00000612191.4
CDS CAA 72 bp CATCCTCAGCCTGGATTCAATGTCAACTACAAACTCTaGATAATCCAGGGAGCCAATGTCCAGAAGTCCAAG +
Preference number: 6 (lower is better)
Translates to: HPQPGFNVNYKL*IIQGANVQKSK
Trigger: CTTGGACTTCTGGACATTGGCTCCCTGGATTATCAAGAGTTTGTAGTTGACATTGAATCCAGGCTGAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415213.7
CDS CAA 90 bp CACACCTTCCATCCTCAGCCTGGATTCAATGTCAACTACAAACTCTaGATAATCCAGGGAGCCAATGTCCAGAAGTCCAAGTTTCTTTGT +
Preference number: 6 (lower is better)
Translates to: HTFHPQPGFNVNYKL*IIQGANVQKSKFLC
Trigger: ACAAAGAAACTTGGACTTCTGGACATTGGCTCCCTGGATTATCAAGAGTTTGTAGTTGACATTGAATCCAGGCTGAGGATGGAAGGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415213.7
CDS CAA 90 bp TATGAATGCAGAAACAGCACTGCTCCATCAGCACATTCTTCAGTCTaGTTTGGACTAGATGCCAAACTTACTGTTCATTTTTCGGTTCAT +
Preference number: 6 (lower is better)
Translates to: YECRNSTAPSAHSSV*FGLDAKLTVHFSVH
Trigger: ATGAACCGAAAAATGAACAGTAAGTTTGGCATCTAGTCCAAACAAGACTGAAGAATGTGCTGATGGAGCAGTGCTGTTTCTGCATTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000439052.5
ENST00000478981.1
ENST00000607373.6
ENST00000612191.4
CDS GCA 72 bp TCATCTTCTGGTAAAGGTATCGGAAAATCTTCATCTTaGCATTCTTCTTTAAGTTCCACACCTTCCATCCTC +
Preference number: 6 (lower is better)
Translates to: SSSGKGIGKSSS*HSSLSSTPSIL
Trigger: GAGGATGGAAGGTGTGGAACTTAAAGAAGAATGGCAAGATGAAGATTTTCCGATACCTTTACCAGAAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000417312.5
ENST00000477543.1
ENST00000557987.5
ENST00000560458.5
ENST00000607373.6
ENST00000612191.4
CDS TCA 72 bp TCATTTTTCGGTTCATCTTGTTTTCCATTAAGTTCTTaGTCAACTACCTATGATCCCAGCACTTTGGAAGGC +
Preference number: 6 (lower is better)
Translates to: SFFGSSCFPLSS*STTYDPSTLEG
Trigger: GCCTTCCAAAGTGCTGGGATCATAGGTAGTTGATCAAGAACTTAATGGAAAACAAGATGAACCGAAAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478981.1
CDS CAA 72 bp TCAGTAATTGAGCCTTTCCTAATTACTTCAGTAGTCTaGGGTTTTGGAAGATCATCTTCCCACTCAAACTCA +
Preference number: 6 (lower is better)
Translates to: SVIEPFLITSVV*GFGRSSSHSNS
Trigger: TGAGTTTGAGTGGGAAGATGATCTTCCAAAACCCAAGACTACTGAAGTAATTAGGAAAGGCTCAATTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267859.8
ENST00000415213.7
ENST00000560458.5
ENST00000607373.6
ENST00000612191.4