RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BNC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000173068

Ensembl transcript IDs: ENST00000380666.6, ENST00000380667.6, ENST00000380672.9, ENST00000411752.5, ENST00000418777.5, ENST00000468187.6, ENST00000471301.3, ENST00000484726.5, ENST00000486514.5, ENST00000545497.5, ENST00000603313.5, ENST00000603713.5, ENST00000613349.4, ENST00000617779.1

Found 1494 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTaGCATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCACCA +
Preference number: 1 (lower is better)
Translates to: SGGSLQSLRERRRLP*HRAPWGAGHHISSP
Trigger: TGGTGAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR GCA 90 bp CTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATGTAGTCCTCTaGCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCC +
Preference number: 1 (lower is better)
Translates to: LEAGGGAQVKDHVVL*HASPIPVQVGVFSP
Trigger: GGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR GCA 90 bp TCCCCTCATCGCTGCCTGCGTCGGATTCTCTGGAGGAATGGATACTaGTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCA +
Preference number: 1 (lower is better)
Translates to: SPHRCLRRILWRNGY*CWTGGWRWCSSQGP
Trigger: TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR GCA 90 bp CTCCTAGCATGGAAAAGGCAGGCAGTGAGGCTCCCACTGAAACAGTaGCAGGTCAGTTCACCTTGCAGGGACTGGCGCTTTCTCCCTCTC +
Preference number: 1 (lower is better)
Translates to: LLAWKRQAVRLPLKQ*QVSSPCRDWRFLPL
Trigger: GAGAGGGAGAAAGCGCCAGTCCCTGCAAGGTGAACTGACCTGGCACTGTTTCAGTGGGAGCCTCACTGCCTGCCTTTTCCATGCTAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 90 bp CCTCATCGCTGCCTGCGTCGGATTCTCTGGAGGAATGGATACTGCTaGTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATGT +
Preference number: 1 (lower is better)
Translates to: PHRCLRRILWRNGYC*WTGGWRWCSSQGPC
Trigger: ACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAGCGATGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CCA 90 bp TGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTCTaGAGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGC +
Preference number: 1 (lower is better)
Translates to: CHREESPHRCLRRIL*RNGYCCWTGGWRWC
Trigger: GCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR GCA 90 bp ACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTaGGTCGGATTCTCTGGAGGAATGGATACTGCTGCTGGACTGGAG +
Preference number: 1 (lower is better)
Translates to: TRPVNVIEKNPLIAA*VGFSGGMDTAAGLE
Trigger: CTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CCA 90 bp CGTCGGATTCTCTGGAGGAATGGATACTGCTGCTGGACTGGAGGCTaGAGGTGGTGCTCAAGTCAAGGACCATGTAGTCCTCTGCCATGC +
Preference number: 1 (lower is better)
Translates to: RRILWRNGYCCWTGG*RWCSSQGPCSPLPC
Trigger: GCATGGCAGAGGACTACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CCA 90 bp AGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTCTGGAGGAATaGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCA +
Preference number: 1 (lower is better)
Translates to: RRIPSSLPASDSLEE*ILLLDWRLEVVLKS
Trigger: TGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR GCA 90 bp TGTCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTaGCTGCGTCGGATTCTCTGGAGGAATGGATACTGCTGCTGGACT +
Preference number: 1 (lower is better)
Translates to: CHSPRQCHREESPHR*LRRILWRNGYCCWT
Trigger: AGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR GCA 90 bp CATAGGAACTCTGCAGGTCCCTACGATCAATACGCTCTCACCCACTaGGAGGCAGAGCTATGCCAGTCTTTTCTCTCGAGCCAACATTTC +
Preference number: 1 (lower is better)
Translates to: HRNSAGPYDQYALTH*EAELCQSFLSSQHF
Trigger: GAAATGTTGGCTCGAGAGAAAAGACTGGCATAGCTCTGCCTCGCAGTGGGTGAGAGCGTATTGATCGTAGGGACCTGCAGAGTTCCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 90 bp CAGCACATTGTCTGGGAGCTCAAGAGCATCATACCTCATGAATCATaGTTCTCGCAGTGGCCACAGCACCGATTCACAGATGGGGTAGAG +
Preference number: 1 (lower is better)
Translates to: QHIVWELKSIIPHES*FSQWPQHRFTDGVE
Trigger: CTCTACCCCATCTGTGAATCGGTGCTGTGGCCACTGCGAGAAGCATGATTCATGAGGTATGATGCTCTTGAGCTCCCAGACAATGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 90 bp GGTCCCTACGATCAATACGCTCTCACCCACTGCGAGGCAGAGCTATaGCAGTCTTTTCTCTCGAGCCAACATTTCCAGTGCATTCATGAT +
Preference number: 1 (lower is better)
Translates to: GPYDQYALTHCEAEL*QSFLSSQHFQCIHD
Trigger: ATCATGAATGCACTGGAAATGTTGGCTCGAGAGAAAAGACTGGCATAGCTCTGCCTCGCAGTGGGTGAGAGCGTATTGATCGTAGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 90 bp CTTCCTGACCCCAAAGGAACTTCAGCTATTTCATGCAGCTGTACTTaGTTTCCTAACCCCTTCCTCAGAGCCGACTCACCTGGTCATAGG +
Preference number: 1 (lower is better)
Translates to: LPDPKGTSAISCSCT*FPNPFLRADSPGHR
Trigger: CCTATGACCAGGTGAGTCGGCTCTGAGGAAGGGGTTAGGAAAGCAAGTACAGCTGCATGAAATAGCTGAAGTTCCTTTGGGGTCAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 90 bp GAACGATCCATGCTGGTGCCATTCGCACCTACTCCTCTGTTAGGATaGAAACGAGGTGTTACCACTGGCCTTTTCTATAGCCTTGCTGAC +
Preference number: 1 (lower is better)
Translates to: ERSMLVPFAPTPLLG*KRGVTTGLFYSLAD
Trigger: GTCAGCAAGGCTATAGAAAAGGCCAGTGGTAACACCTCGTTTTCATCCTAACAGAGGAGTAGGTGCGAATGGCACCAGCATGGATCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 90 bp ACCAATGGGTCTGGAGTAAGAAAGGTGTGTGTTCTCCCAGCTGTGTaGGGGATCTTGCTAGTTCTAAAAGGCCTAGTCCATCACCAGCAG +
Preference number: 1 (lower is better)
Translates to: TNGSGVRKVCVLPAV*GILLVLKGLVHHQQ
Trigger: CTGCTGGTGATGGACTAGGCCTTTTAGAACTAGCAAGATCCCTCACACAGCTGGGAGAACACACACCTTTCTTACTCCAGACCCATTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CCA 90 bp GTTACTGTCCACTTAATAGCTGGAGAGGGCATCGAGAGGCAGCCTTaGGCTTCCCACAGATACAGTAGGTGTGTGTATGTGCTTGTATGT +
Preference number: 1 (lower is better)
Translates to: VTVHLIAGEGIERQP*ASHRYSRCVYVLVC
Trigger: ACATACAAGCACATACACACACCTACTGTATCTGTGGGAAGCCCAAGGCTGCCTCTCGATGCCCTCTCCAGCTATTAAGTGGACAGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 90 bp ATTAACTCAGCACATTGTCTGGGAGCTCAAGAGCATCATACCTCATaGATCATGCTTCTCGCAGTGGCCACAGCACCGATTCACAGATGG +
Preference number: 1 (lower is better)
Translates to: INSAHCLGAQEHHTS*IMLLAVATAPIHRW
Trigger: CCATCTGTGAATCGGTGCTGTGGCCACTGCGAGAAGCATGATTCATGAGGTATGATGCTCTTGAGCTCCCAGACAATGTGCTGAGTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 90 bp ATCAGGGTGATGCACACTGTCCCATCCCTTGGTGCAGTTACCTTTTaGAGTACAGACTTTGATTCTGCGGCAGGCTTATTGCAAGAGACT +
Preference number: 1 (lower is better)
Translates to: IRVMHTVPSLGAVTF*STDFDSAAGLLQET
Trigger: AGTCTCTTGCAATAAGCCTGCCGCAGAATCAAAGTCTGTACTTCAAAAGGTAACTGCACCAAGGGATGGGACAGTGTGCATCACCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 90 bp GGGCTAGTTGCACACTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTaGATGTGTGTGTGTGTGTGTTTAAAGGGGTACTCTGTTTTCACC +
Preference number: 1 (lower is better)
Translates to: GLVAHCVCVCVCVCM*MCVCVCLKGYSVFT
Trigger: GGTGAAAACAGAGTACCCCTTTAAACACACACACACACACATGCACATACACACACACACACACACACACACACAGTGTGCAACTAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR GCA 90 bp CTGCATTCTTTATACTGGCACTGGCAGGAAAATGGTGAGATTCTCTaGAGGGCAGCTGAACCAAAGTTTGCACAGGAAAGCAAATGCACC +
Preference number: 1 (lower is better)
Translates to: LHSLYWHWQENGEIL*RAAEPKFAQESKCT
Trigger: GGTGCATTTGCTTTCCTGTGCAAACTTTGGTTCAGCTGCCCTGCAGAGAATCTCACCATTTTCCTGCCAGTGCCAGTATAAAGAATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 90 bp TTCAGAGGAAAATTACACACTAGAAAACCCAAGTCACTTCCTCATTaGCCCACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGA +
Preference number: 1 (lower is better)
Translates to: FRGKLHTRKPKSLPH*PTPRTLHSIRQPER
Trigger: TCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTGGGGCAATGAGGAAGTGACTTGGGTTTTCTAGTGTGTAATTTTCCTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468187.6
ENST00000471301.3
3UTR GCA 90 bp GTGGTCTATTTGGTGCACAGTTCTGAAGACGGTGGAAATGAGTGGTaGAGTTCTTGTAGTGGAGGAGTGAAAGGTCAGCAGAGGCTTAAA +
Preference number: 1 (lower is better)
Translates to: VVYLVHSSEDGGNEW*SSCSGGVKGQQRLK
Trigger: TTTAAGCCTCTGCTGACCTTTCACTCCTCCACTACAAGAACTGCACCACTCATTTCCACCGTCTTCAGAACTGTGCACCAAATAGACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR CCA 90 bp GGGAAGGATGAGGATGATGAAACTACACAAGGAAGGACGGGTATGTaGGCAACAGTGATGACAGATAACTCACTGGTCAGTTGTACAGCT +
Preference number: 1 (lower is better)
Translates to: GKDEDDETTQGRTGM*ATVMTDNSLVSCTA
Trigger: AGCTGTACAACTGACCAGTGAGTTATCTGTCATCACTGTTGCCCACATACCCGTCCTTCCTTGTGTAGTTTCATCATCCTCATCCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CCA 90 bp GACCCTTTATTTAAGAAGTCATCTTGTTACTGTCCACTTAATAGCTaGAGAGGGCATCGAGAGGCAGCCTTGGGCTTCCCACAGATACAG +
Preference number: 1 (lower is better)
Translates to: DPLFKKSSCYCPLNS*RGHREAALGFPQIQ
Trigger: CTGTATCTGTGGGAAGCCCAAGGCTGCCTCTCGATGCCCTCTCCAGCTATTAAGTGGACAGTAACAAGATGACTTCTTAAATAAAGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CCA 90 bp TTCATGTACCCAGGTTTAGCTCTCCTGCATTCTTTATACTGGCACTaGCAGGAAAATGGTGAGATTCTCTGCAGGGCAGCTGAACCAAAG +
Preference number: 1 (lower is better)
Translates to: FMYPGLALLHSLYWH*QENGEILCRAAEPK
Trigger: CTTTGGTTCAGCTGCCCTGCAGAGAATCTCACCATTTTCCTGCCAGTGCCAGTATAAAGAATGCAGGAGAGCTAAACCTGGGTACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CCA 90 bp TTTGTGGTCTATTTGGTGCACAGTTCTGAAGACGGTGGAAATGAGTaGTGCAGTTCTTGTAGTGGAGGAGTGAAAGGTCAGCAGAGGCTT +
Preference number: 1 (lower is better)
Translates to: FVVYLVHSSEDGGNE*CSSCSGGVKGQQRL
Trigger: AAGCCTCTGCTGACCTTTCACTCCTCCACTACAAGAACTGCACCACTCATTTCCACCGTCTTCAGAACTGTGCACCAAATAGACCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR TCA 90 bp GAGGGAGGTGGAAATCAGGAAGACCCTTTCAAAGTGGTCTCTTCATaGAAAATACCACCGGTGCACTCAGTATGTGCATTCTGCTCAGAT +
Preference number: 1 (lower is better)
Translates to: EGGGNQEDPFKVVSS*KIPPVHSVCAFCSD
Trigger: ATCTGAGCAGAATGCACATACTGAGTGCACCGGTGGTATTTTTCATGAAGAGACCACTTTGAAAGGGTCTTCCTGATTTCCACCTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR CCA 90 bp ATATGGAGGCTGAGTCCAATAATTTTGTTACTGGAGACACACCAATaGGTCTGGAGTAAGAAAGGTGTGTGTTCTCCCAGCTGTGTGAGG +
Preference number: 1 (lower is better)
Translates to: IWRLSPIILLLETHQ*VWSKKGVCSPSCVR
Trigger: CCTCACACAGCTGGGAGAACACACACCTTTCTTACTCCAGACCCATTGGTGTGTCTCCAGTAACAAAATTATTGGACTCAGCCTCCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 90 bp CACTGTCCCATCCCTTGGTGCAGTTACCTTTTGAAGTACAGACTTTaGTTCTGCGGCAGGCTTATTGCAAGAGACTGGTTTTATGCAGAT +
Preference number: 1 (lower is better)
Translates to: HCPIPWCSYLLKYRL*FCGRLIARDWFYAD
Trigger: ATCTGCATAAAACCAGTCTCTTGCAATAAGCCTGCCGCAGAATCAAAGTCTGTACTTCAAAAGGTAACTGCACCAAGGGATGGGACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 90 bp TCTGACTGTGCCGATTTCGGCTTCGTACAGAGGAAAACATCATATTaGAACCTGGGACTTTGCACTTGTGCATTTCTCTCAAATGCACAG +
Preference number: 1 (lower is better)
Translates to: SDCADFGFVQRKTSY*NLGLCTCAFLSNAQ
Trigger: CTGTGCATTTGAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCAATATGATGTTTTCCTCTGTACGAAGCCGAAATCGGCACAGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR TCA 90 bp TTGTTCAAGGTACATACAGTATTTAGGAAGCTACCAACGTCACAATaGTTAGATCAGGGTGATGCACACTGTCCCATCCCTTGGTGCAGT +
Preference number: 1 (lower is better)
Translates to: LFKVHTVFRKLPTSQ*LDQGDAHCPIPWCS
Trigger: ACTGCACCAAGGGATGGGACAGTGTGCATCACCCTGATCTAATCATTGTGACGTTGGTAGCTTCCTAAATACTGTATGTACCTTGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 90 bp GTCAGCTGTCCAGGACTTATTGCCACTTCTCTGACAAAACACAGGTaGACACATTCATGTTTCCAAGCAAGGGAAACTCTACTTCTAGAA +
Preference number: 1 (lower is better)
Translates to: VSCPGLIATSLTKHR*THSCFQARETLLLE
Trigger: TTCTAGAAGTAGAGTTTCCCTTGCTTGGAAACATGAATGTGTTCACCTGTGTTTTGTCAGAGAAGTGGCAATAAGTCCTGGACAGCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 90 bp ATAAACAGGCAATTACGCATCCTTTTATATTTGATGGCCAAGTGCTaGACTGGAAAGCACACTATTAGTTTGTGTCCCTTCAGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: INRQLRILLYLMAKC*TGKHTISLCPFRAR
Trigger: CCTGGCCCTGAAGGGACACAAACTAATAGTGTGCTTTCCAGTTCAGCACTTGGCCATCAAATATAAAAGGATGCGTAATTGCCTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 90 bp GAAAGATTCACACCAATAAAGTCTGTGAGAAGGTCAGATAGATTCTaGGGGAGGTGGAAATCAGGAAGACCCTTTCAAAGTGGTCTCTTC +
Preference number: 1 (lower is better)
Translates to: ERFTPIKSVRRSDRF*GRWKSGRPFQSGLF
Trigger: GAAGAGACCACTTTGAAAGGGTCTTCCTGATTTCCACCTCCCTCAGAATCTATCTGACCTTCTCACAGACTTTATTGGTGTGAATCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR GCA 90 bp AAAAGGAAATCATTCGTCAGCCATGAAGCTTTGTGGTCTATTTGGTaGACAGTTCTGAAGACGGTGGAAATGAGTGGTGCAGTTCTTGTA +
Preference number: 1 (lower is better)
Translates to: KRKSFVSHEALWSIW*TVLKTVEMSGAVLV
Trigger: TACAAGAACTGCACCACTCATTTCCACCGTCTTCAGAACTGTGCACCAAATAGACCACAAAGCTTCATGGCTGACGAATGATTTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR CCA 90 bp TTTATGGTGAGCAACACTCCAGCTACAGGAAATATGCGACTCGTCTaGGACAGATCAAACATGACCTTAGTACTAACGCAAACAAGACTA +
Preference number: 1 (lower is better)
Translates to: FMVSNTPATGNMRLV*DRSNMTLVLTQTRL
Trigger: TAGTCTTGTTTGCGTTAGTACTAAGGTCATGTTTGATCTGTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGTGTTGCTCACCATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CCA 90 bp ATGAAAAGGAAATCATTCGTCAGCCATGAAGCTTTGTGGTCTATTTaGTGCACAGTTCTGAAGACGGTGGAAATGAGTGGTGCAGTTCTT +
Preference number: 1 (lower is better)
Translates to: MKRKSFVSHEALWSI*CTVLKTVEMSGAVL
Trigger: AAGAACTGCACCACTCATTTCCACCGTCTTCAGAACTGTGCACCAAATAGACCACAAAGCTTCATGGCTGACGAATGATTTCCTTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR CCA 90 bp CTTTGCATCATGAAAAGGAAATCATTCGTCAGCCATGAAGCTTTGTaGTCTATTTGGTGCACAGTTCTGAAGACGGTGGAAATGAGTGGT +
Preference number: 1 (lower is better)
Translates to: LCIMKRKSFVSHEAL*SIWCTVLKTVEMSG
Trigger: ACCACTCATTTCCACCGTCTTCAGAACTGTGCACCAAATAGACCACAAAGCTTCATGGCTGACGAATGATTTCCTTTTCATGATGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR GCA 90 bp CCCTACAGATTAGGGGGCAATATAATCTTACTTATGCCACTGACTTaGAGGAAAATTTGCTCTAATTATAGGGCCACACCCATTACTCTC +
Preference number: 1 (lower is better)
Translates to: PYRLGGNIILLMPLT*RKICSNYRATPITL
Trigger: GAGAGTAATGGGTGTGGCCCTATAATTAGAGCAAATTTTCCTGCAAGTCAGTGGCATAAGTAAGATTATATTGCCCCCTAATCTGTAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 90 bp AGGAAGACCCTTTCAAAGTGGTCTCTTCATGAAAAATACCACCGGTaGACTCAGTATGTGCATTCTGCTCAGATATTTTGGCCTGAATTT +
Preference number: 1 (lower is better)
Translates to: RKTLSKWSLHEKYHR*TQYVHSAQIFWPEF
Trigger: AAATTCAGGCCAAAATATCTGAGCAGAATGCACATACTGAGTGCACCGGTGGTATTTTTCATGAAGAGACCACTTTGAAAGGGTCTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR CCA 90 bp CTTCAAGATATTTCAACTCCCTCTGGCCACTTTTGCTGTCAAATATaGAGGCTGAGTCCAATAATTTTGTTACTGGAGACACACCAATGG +
Preference number: 1 (lower is better)
Translates to: LQDISTPSGHFCCQI*RLSPIILLLETHQW
Trigger: CCATTGGTGTGTCTCCAGTAACAAAATTATTGGACTCAGCCTCCATATTTGACAGCAAAAGTGGCCAGAGGGAGTTGAAATATCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 90 bp GTCCTTGCTCAAAGTGCTTTTCTTCCCAGTCCCCACACTGGTTCATaGAATTATTTAGCACAGATTTGTCAACATAGACCTGTTACATTG +
Preference number: 1 (lower is better)
Translates to: VLAQSAFLPSPHTGS*NYLAQICQHRPVTL
Trigger: CAATGTAACAGGTCTATGTTGACAAATCTGTGCTAAATAATTTCATGAACCAGTGTGGGGACTGGGAAGAAAAGCACTTTGAGCAAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 90 bp GGGGGCAATATAATCTTACTTATGCCACTGACTTGCAGGAAAATTTaGTCTAATTATAGGGCCACACCCATTACTCTCAAGATGGAATTG +
Preference number: 1 (lower is better)
Translates to: GGNIILLMPLTCRKI*SNYRATPITLKMEL
Trigger: CAATTCCATCTTGAGAGTAATGGGTGTGGCCCTATAATTAGAGCAAATTTTCCTGCAAGTCAGTGGCATAAGTAAGATTATATTGCCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 90 bp TGTTCTCTCCTTGCTAAAGTTCATATGGAAGATGATACCGATACCTaGACGTGTCTTACCTGGCTGACTAATATCTTACTGAAATGTGAC +
Preference number: 1 (lower is better)
Translates to: CSLLAKVHMEDDTDT*TCLTWLTNILLKCD
Trigger: GTCACATTTCAGTAAGATATTAGTCAGCCAGGTAAGACACGTGCAGGTATCGGTATCATCTTCCATATGAACTTTAGCAAGGAGAGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 90 bp ACTGCTGCTGTTAAATGCCTTTTGATTTTGTCTACCAAACAGGCCTaGATTATAGTACGACTGCAGAATTTGCAACAAATTAGACAGCCA +
Preference number: 1 (lower is better)
Translates to: TAAVKCLLILSTKQA*IIVRLQNLQQIRQP
Trigger: TGGCTGTCTAATTTGTTGCAAATTCTGCAGTCGTACTATAATTCAGGCCTGTTTGGTAGACAAAATCAAAAGGCATTTAACAGCAGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 90 bp AAAGACAACAAAACAGTCTGCAATGCACACCCTAATGGTTTTGGCTaGAGACTGAACTTGAGTAAATATCATCATTTAGTCAGTATGTTG +
Preference number: 1 (lower is better)
Translates to: KDNKTVCNAHPNGFG*RLNLSKYHHLVSML
Trigger: CAACATACTGACTAAATGATGATATTTACTCAAGTTCAGTCTGCAGCCAAAACCATTAGGGTGTGCATTGCAGACTGTTTTGTTGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CCA 90 bp TGCCAGGGAGGGCAGGGGCCTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGCTGCGTCGGATTCTCTaGAGGAATGGATACTGCTGC +
Preference number: 2 (lower is better)
Translates to: CQGGQGPRPCVPTPHCHSLRRIL*RNGYCC
Trigger: GCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAG...CGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCCCCTGCCCTCCCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp AGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCGGAGTCTTCAGTCCCTaGGGGAGAGGAGGCGTCTTC +
Preference number: 2 (lower is better)
Translates to: RWESSVPAGEEASSLTSSGVFSP*GRGGVF
Trigger: GAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCC...GCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp GAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCGGCCTCGGCCTTGTGTaGCGACTCCCCACTGTCACT +
Preference number: 2 (lower is better)
Translates to: EASSLTSSPMGCWAPYIFGLGLV*RLPTVT
Trigger: AGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCC...GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp CTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGGACCATGTAGTCCTCTaGCATGCCTCTCCCATACCC +
Preference number: 2 (lower is better)
Translates to: LPCLSHTRSGGSLQSLREDHVVL*HASPIP
Trigger: GGGTATGGGAGAGGCATGGCAGAGGACTACATGGTC...CTCCCGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp CTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGGACCATGTAGTCCTCTaGCATGCCTCTCCCATACCC +
Preference number: 2 (lower is better)
Translates to: LGLVCRLPTVTRPVNVIEDHVVL*HASPIP
Trigger: GGGTATGGGAGAGGCATGGCAGAGGACTACATGGTC...CTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp AGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCTGGAGGAATGGATACTaGTGCTGGACTGGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: RWESSVPAGEEASSLTSSWRNGY*CWTGGW
Trigger: CCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCA...GCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp CTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGTGTAGTCCTCTGCCATaGCTCTCCCATACCCGTTCA +
Preference number: 2 (lower is better)
Translates to: LPCLSHTRSGGSLQSLRECSPLP*LSHTRS
Trigger: TGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA...CTCCCGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCCTTCAGCCCCTAGGCTaGCAGGGAGGGCAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESLQPLG*QGGQGP
Trigger: AGGCCCCTGCCCTCCCTGGCAGCCTAGGGGCTGAAG...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp CTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATGGAGTCTTCAGTCCCTaGGGGAGAGGAGGCGTCTTC +
Preference number: 2 (lower is better)
Translates to: LVCRLPTVTRPVNVIEKNGVFSP*GRGGVF
Trigger: GAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCC...ATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp GCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTGAATCCCCTCATCGCTaGCTGCGTCGGATTCTCTGG +
Preference number: 2 (lower is better)
Translates to: APSMSSRRIPSSLPASDSESPHR*LRRILW
Trigger: CCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTC...AGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp CTGCCTGCGTCGGATTCTCTGGAGGAATGGATACTGCTGCTGGACTGGAGGCTGAGCCCCATGGGGTGCTaGGCACCATATATCTTCACC +
Preference number: 2 (lower is better)
Translates to: LPASDSLEEWILLLDWRLSPMGC*APYIFT
Trigger: GGTGAAGATATATGGTGCCCAGCACCCCATGGGGCT...CAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp TGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCATACTGCTGCTGGACTaGAGGCTGGAGGTGGTGCTC +
Preference number: 2 (lower is better)
Translates to: CSPLPCLSHTRSGGSLQSILLLD*RLEVVL
Trigger: GAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTAT...GGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp GCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTTCGAGCCCCATGGGGTaGTGGGCACCATATATCTTC +
Preference number: 2 (lower is better)
Translates to: APSMSSRRIPSSLPASDSSSPMG*WAPYIF
Trigger: GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGA...AGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp GAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCTGTAGTCCTCTGCCATaGCTCTCCCATACCCGTTCA +
Preference number: 2 (lower is better)
Translates to: EASSLTSSPMGCWAPYIFCSPLP*LSHTRS
Trigger: TGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA...GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp TGGGGTGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCGGCCTCGGCCTTGTGTaGCGACTCCCCACTGTCACT +
Preference number: 2 (lower is better)
Translates to: WGAGHHISSPKIHRGGPCGLGLV*RLPTVT
Trigger: AGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCC...GCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCACCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp TGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGCTTCAGCCCCTAGGCTaGCAGGGAGGGCAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: CTLRVPLLLYILWQMLHMLQPLG*QGGQGP
Trigger: AGGCCCCTGCCCTCCCTGGCAGCCTAGGGGCTGAAG...CATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp GTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACTTCAGCCCCTAGGCTaGCAGGGAGGGCAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: VVHSQGPLVAVHFVANVALQPLG*QGGQGP
Trigger: AGGCCCCTGCCCTCCCTGGCAGCCTAGGGGCTGAAG...TGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp CTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATCCATACCCGTTCAGGTaGGAGTCTTCAGTCCCTGCG +
Preference number: 2 (lower is better)
Translates to: LVCRLPTVTRPVNVIEKNPYPFR*ESSVPA
Trigger: CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGG...ATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp TCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTACTGGAGGCTGGAGGTaGTGCTCAAGTCAAGGACCA +
Preference number: 2 (lower is better)
Translates to: SPRQCHREESPHRCLRRITGGWR*CSSQGP
Trigger: TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGT...AATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp CTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGGACGGTGGAAATGAGTaGTGCAGTTCTTGTAGTGGA +
Preference number: 2 (lower is better)
Translates to: LPCLSHTRSGGSLQSLREDGGNE*CSSCSG
Trigger: TCCACTACAAGAACTGCACCACTCATTTCCACCGTC...CTCCCGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR CAA 90 bp TCGCAGTGGCCACAGCACCGATTCACAGATGGGGTAGAGGATGCTTaGTCTCCTAGCATGGAAAAGGCAGGCAGTGAGGCTCCCACTGAA +
Preference number: 2 (lower is better)
Translates to: SQWPQHRFTDGVEDA*SPSMEKAGSEAPTE
Trigger: TTCAGTGGGAGCCTCACTGCCTGCCTTTTCCATGCTAGGAGACAAAGCATCCTCTACCCCATCTGTGAATCGGTGCTGTGGCCACTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR GCA 90 bp CTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATTCGAGCCCCATGGGGTaGTGGGCACCATATATCTTC +
Preference number: 2 (lower is better)
Translates to: LVCRLPTVTRPVNVIEKNSSPMG*WAPYIF
Trigger: GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGA...ATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp AGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCTCAGGGTCCCCTTGTTaGTGTACATTTTGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: RWESSVPAGEEASSLTSSSGSPC*CTFCGK
Trigger: TTTGCCACAAAATGTACAGCAACAAGGGGACCCTGA...GCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp CTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATACTGGAGGCTGGAGGTaGTGCTCAAGTCAAGGACCA +
Preference number: 2 (lower is better)
Translates to: LVCRLPTVTRPVNVIEKNTGGWR*CSSQGP
Trigger: TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGT...ATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp GAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCGATTCTCTGGAGGAATaGATACTGCTGCTGGACTGG +
Preference number: 2 (lower is better)
Translates to: EASSLTSSPMGCWAPYIFDSLEE*ILLLDW
Trigger: CCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATC...GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp CCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTCTGTCTTGCATCCAGCTaGGCCAGCAGGAGGTCATTA +
Preference number: 2 (lower is better)
Translates to: PRQCHREESPHRCLRRILCLASS*ASRRSL
Trigger: TAATGACCTCCTGCTGGCCCAGCTGGATGCAAGACA...GAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR-3UTR TCA 90 bp CTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCCCAAGGAGGCGTCTTCCCTaGCATCGAGCCCCATGGGGT +
Preference number: 2 (lower is better)
Translates to: LRVPLLLYILWQMLHMIPRRRLP*HRAPWG
Trigger: ACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCCT...TGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp TGGGGTGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCGAATCCCCTCATCGCTaGCTGCGTCGGATTCTCTGG +
Preference number: 2 (lower is better)
Translates to: WGAGHHISSPKIHRGGPCESPHR*LRRILW
Trigger: CCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTC...GCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCACCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp TGGGGTGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCCCATACCCGTTCAGGTaGGAGTCTTCAGTCCCTGCG +
Preference number: 2 (lower is better)
Translates to: WGAGHHISSPKIHRGGPCPYPFR*ESSVPA
Trigger: CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGG...GCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCACCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CAA 90 bp GCAGGCAGTGAGGCTCCCACTGAAACAGTGCCAGGTCAGTTCACCTaGCAGGGACTGGCGCTTTCTCCCTCTCTTTTGAAAAACATATCC +
Preference number: 2 (lower is better)
Translates to: AGSEAPTETVPGQFT*QGLALSPSLLKNIS
Trigger: GGATATGTTTTTCAAAAGAGAGGGAGAAAGCGCCAGTCCCTGCAAGGTGAACTGACCTGGCACTGTTTCAGTGGGAGCCTCACTGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR TCA 90 bp CTGCCTGCGTCGGATTCTCTGGAGGAATGGATACTGCTGCTGGACTGGAGGCTGTACATAAGCGCACACTaGCTATGGCAGTTCAAACAC +
Preference number: 2 (lower is better)
Translates to: LPASDSLEEWILLLDWRLYISAH*LWQFKH
Trigger: GTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTA...CAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR TCA 90 bp ATGTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATAGGAGGCGTCTTCCCTaGCATCGAGCCCCATGGGGT +
Preference number: 2 (lower is better)
Translates to: MLHMIPPLLPDKLLNIRDRRRLP*HRAPWG
Trigger: ACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCCT...ATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp TGGGGTGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCGGAGGCTGGAGGTGGTaGTCAAGTCAAGGACCATGT +
Preference number: 2 (lower is better)
Translates to: WGAGHHISSPKIHRGGPCGGWRW*SSQGPC
Trigger: ACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCC...GCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp TGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGCCCCTCATCGCTGCCTaGGTCGGATTCTCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: CTLRVPLLLYILWQMLHMPLIAA*VGFSGG
Trigger: TCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGG...CATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCAGCCCCATGGGGTGCTaGGCACCATATATCTTCACC +
Preference number: 2 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESSPMGC*APYIFT
Trigger: GGTGAAGATATATGGTGCCCAGCACCCCATGGGGCT...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp GAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCCAGAGCATACATAAATaGACACACACACACACACAC +
Preference number: 2 (lower is better)
Translates to: EASSLTSSPMGCWAPYIFQSIHK*THTHTH
Trigger: GTGTGTGTGTGTGTGTGTGCATTTATGTATGCTCTG...GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp TTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGAGGAATGGATACTGCTaGTGGACTGGAGGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: LLPDKLLNIRDPETSAPRRNGYC*WTGGWR
Trigger: CCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT...CCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCTGCTGGACTGGAGGCTaGAGGTGGTGCTCAAGTCAA +
Preference number: 2 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVCWTGG*RWCSSQ
Trigger: TTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCA...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp GTGGAGATTAGGGTTCTGACTGTGCCGATTTCGGCTTCGTACAGAGGAAAACATATACTGCTGCTGGACTaGAGGCTGGAGGTGGTGCTC +
Preference number: 2 (lower is better)
Translates to: VEIRVLTVPISASYRGKHILLLD*RLEVVL
Trigger: GAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTAT...ATGTTTTCCTCTGTACGAAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp CACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCAGAGCATACATAAATaGACACACACACACACACAC +
Preference number: 2 (lower is better)
Translates to: HCHSPRQCHREESPHRCLQSIHK*THTHTH
Trigger: GTGTGTGTGTGTGTGTGTGCATTTATGTATGCTCTG...CAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp GTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCAGGAGGCTGGAGGTGGTaGTCAAGTCAAGGACCATGT +
Preference number: 2 (lower is better)
Translates to: VVHSQGPLVAVHFVANVAGGWRW*SSQGPC
Trigger: ACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCC...TGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp TGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCGGGACTTTGCACTTGTaGATTTCTCTCAAATGCACA +
Preference number: 2 (lower is better)
Translates to: CSPLPCLSHTRSGGSLQSGTLHL*ISLKCT
Trigger: TGTGCATTTGAGAGAAATGCACAAGTGCAAAGTCCC...GGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp GCTACAGTGGCAAGCATGAGTAATGATCAAGAAAGGAACGATCCATGCTGGTGCGGCCACCGTAACGACTaGGCACTTGAGGCACAAAAG +
Preference number: 2 (lower is better)
Translates to: ATVASMSNDQERNDPCWCGHRND*ALEAQK
Trigger: CTTTTGTGCCTCAAGTGCCCAGTCGTTACGGTGGCC...GCACCAGCATGGATCGTTCCTTTCTTGATCATTACTCATGCTTGCCACTGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CCA 90 bp GTGGAGATTAGGGTTCTGACTGTGCCGATTTCGGCTTCGTACAGAGGAAAACATAGCCCCATGGGGTGCTaGGCACCATATATCTTCACC +
Preference number: 2 (lower is better)
Translates to: VEIRVLTVPISASYRGKHSPMGC*APYIFT
Trigger: GGTGAAGATATATGGTGCCCAGCACCCCATGGGGCT...ATGTTTTCCTCTGTACGAAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp GTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCAAATGGATACTGCTGCTaGACTGGAGGCTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: VVHSQGPLVAVHFVANVANGYCC*TGGWRW
Trigger: CCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT...TGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCAAAACTGGGGCTAGTTaGACACTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESKTGAS*TLCVCV
Trigger: CACACACACACACAGTGTGCAACTAGCCCCAGTTTT...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp TGGGGTGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCAAAACTGGGGCTAGTTaGACACTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: WGAGHHISSPKIHRGGPCKTGAS*TLCVCV
Trigger: CACACACACACACAGTGTGCAACTAGCCCCAGTTTT...GCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCACCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACAGACCATGTAGTCCTCTaGCATGCCTCTCCCATACCC +
Preference number: 2 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTDHVVL*HASPIP
Trigger: GGGTATGGGAGAGGCATGGCAGAGGACTACATGGTC...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp TTGCTGTACATTTTGTGGCAAATGTTGCACATGATCCCACCATTGCTCCCAGACGGAGGCTGGAGGTGGTaGTCAAGTCAAGGACCATGT +
Preference number: 2 (lower is better)
Translates to: LLYILWQMLHMIPPLLPDGGWRW*SSQGPC
Trigger: ACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCC...GTCTGGGAGCAATGGTGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp ACAGAGGAAAACATCATATTGCAACCTGGGACTTTGCACTTGTGCATTTCTCTCCCCCTCATCGCTGCCTaGGTCGGATTCTCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: TEENIILQPGTLHLCISLPLIAA*VGFSGG
Trigger: TCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGG...GAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCAATATGATGTTTTCCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp TTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGGATTCTCTGGAGGAATaGATACTGCTGCTGGACTGG +
Preference number: 2 (lower is better)
Translates to: LLPDKLLNIRDPETSAPRDSLEE*ILLLDW
Trigger: CCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATC...CCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CAA 90 bp TGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTaGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATA +
Preference number: 2 (lower is better)
Translates to: CTLRVPLLLYILWQM*HMIPPLLPDKLLNI
Trigger: TATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR TCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTACATAAGCGCACACTaGCTATGGCAGTTCAAACAC +
Preference number: 2 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESYISAH*LWQFKH
Trigger: GTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTA...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR TCA 90 bp TGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGTGGAGATTAGGGTTCTaGCTGTGCCGATTTCGGCTT +
Preference number: 2 (lower is better)
Translates to: CTLRVPLLLYILWQMLHMWRLGF*LCRFRL
Trigger: AAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCA...CATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR TCA 90 bp TCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTGAGACTAATCTACTaGAGTGAAGGGAATGTTTTT +
Preference number: 2 (lower is better)
Translates to: SPRQCHREESPHRCLRRILRLIY*SEGNVF
Trigger: AAAAACATTCCCTTCACTTCAGTAGATTAGTCTCAG...AATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp AATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTCTGGAGGACAGAGCATACATAAATaGACACACACACACACACAC +
Preference number: 2 (lower is better)
Translates to: NVIEKNPLIAACVGFSGGQSIHK*THTHTH
Trigger: GTGTGTGTGTGTGTGTGTGCATTTATGTATGCTCTG...TCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp AGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGAGGTGCACTCAGTATGTaGATTCTGCTCAGATATTTT +
Preference number: 2 (lower is better)
Translates to: RNGYCCWTGGWRWCSSQGGALSM*ILLRYF
Trigger: AAAATATCTGAGCAGAATGCACATACTGAGTGCACC...TCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR-3UTR CCA 90 bp GAGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGTGTCATCGAGTTCTTTaGTCAACAGTTTACGATGTA +
Preference number: 2 (lower is better)
Translates to: EEWILLLDWRLEVVLKSRCHRVL*STVYDV
Trigger: TACATCGTAAACTGTTGACCAAAGAACTCGATGACA...CCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR TCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGTACATAAGCGCACACTaGCTATGGCAGTTCAAACAC +
Preference number: 2 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRYISAH*LWQFKH
Trigger: GTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTA...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR TCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGACTCTGTTTTCACCCTaGAATCAAAGATCCCACTCC +
Preference number: 2 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRTLFSP*NQRSHS
Trigger: GGAGTGGGATCTTTGATTTCAGGGTGAAAACAGAGT...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR TCA 90 bp GGGCAGCTGAACCAAAGTTTGCACAGGAAAGCAAATGCACCATATACTAGAAATGCCTGGTGCATTTGCTaGTGTGACTGCCGACAGCTA +
Preference number: 2 (lower is better)
Translates to: GQLNQSLHRKANAPYTRNAWCIC*CDCRQL
Trigger: TAGCTGTCGGCAGTCACATCAGCAAATGCACCAGGC...ATTTCTAGTATATGGTGCATTTGCTTTCCTGTGCAAACTTTGGTTCAGCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR TCA 90 bp ATGGGTACAACAAATTGTCTCTTTGGGGAAGACCAAGAATTATTCTGTCAAAACAGGAGGCGTCTTCCCTaGCATCGAGCCCCATGGGGT +
Preference number: 2 (lower is better)
Translates to: MGTTNCLFGEDQELFCQNRRRLP*HRAPWG
Trigger: ACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCCT...GTTTTGACAGAATAATTCTTGGTCTTCCCCAAAGAGACAATTTGTTGTACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR TCA 90 bp GTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCAAAGTGGTCTCTTCATaGAAAATACCACCGGTGCAC +
Preference number: 2 (lower is better)
Translates to: VAHDPTIAPRQAAEHKRSKVVSS*KIPPVH
Trigger: GTGCACCGGTGGTATTTTTCATGAAGAGACCACTTT...GGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR-3UTR GCA 90 bp ACAGAGGAAAACATCATATTGCAACCTGGGACTTTGCACTTGTGCATTTCTCTCTGGAGGAATGGATACTaGTGCTGGACTGGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: TEENIILQPGTLHLCISLWRNGY*CWTGGW
Trigger: CCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCA...GAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCAATATGATGTTTTCCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp ACATCATATTGCAACCTGGGACTTTGCACTTGTGCATTTCTCTCAAATGCACAGAATGGATACTGCTGCTaGACTGGAGGCTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: TSYCNLGLCTCAFLSNAQNGYCC*TGGWRW
Trigger: CCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT...CTGTGCATTTGAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCAATATGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CAA 90 bp TGGGCTGAAGCAGAGAGGGTGTTGTCTGCTGTTAGTGTGACAGTCTaGTCAGCAGCGTTCACATTACTGGAAGGTAATAAAGTGACAAGT +
Preference number: 2 (lower is better)
Translates to: WAEAERVLSAVSVTV*SAAFTLLEGNKVTS
Trigger: ACTTGTCACTTTATTACCTTCCAGTAATGTGAACGCTGCTGACAAGACTGTCACACTAACAGCAGACAACACCCTCTCTGCTTCAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR TCA 90 bp ACTCCAGCTACAGGAAATATGCGACTCGTCTGGGACAGATCAAACATGACCTTAGTGCATAGTTTCTCCTaGGGAGAAGCCTCTGGAATA +
Preference number: 2 (lower is better)
Translates to: TPATGNMRLVWDRSNMTLVHSFS*GEASGI
Trigger: TATTCCAGAGGCTTCTCCTCAGGAGAAACTATGCAC...TAAGGTCATGTTTGATCTGTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR TCA 90 bp CACTTAAGTTTTCAAAGAAGCAAAGGATGCCGTCACAGACAGCATCTCTCTACTATTGTCGGCTCTTCCTaGCCCCAAAGGAACTTCAGC +
Preference number: 2 (lower is better)
Translates to: HLSFQRSKGCRHRQHLSTIVGSS*PQRNFS
Trigger: GCTGAAGTTCCTTTGGGGTCAGGAAGAGCCGACAAT...AGTAGAGAGATGCTGTCTGTGACGGCATCCTTTGCTTCTTTGAAAACTTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR GCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACACTGTGCTGTAAAGCATaGCAGCACCTCTTTAGCACT +
Preference number: 2 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTLCCKA*QHLFST
Trigger: AGTGCTAAAGAGGTGCTGGCATGCTTTACAGCACAG...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR GCA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTCTGTCCAGGACTTATTaGCACTTCTCTGACAAAACA +
Preference number: 2 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTLSRTY*HFSDKT
Trigger: TGTTTTGTCAGAGAAGTGGCAATAAGTCCTGGACAG...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR GCA 90 bp GTGGAGATTAGGGTTCTGACTGTGCCGATTTCGGCTTCGTACAGAGGAAAACATTGCAACCTGGGACTTTaGACTTGTGCATTTCTCTCA +
Preference number: 2 (lower is better)
Translates to: VEIRVLTVPISASYRGKHCNLGL*TCAFLS
Trigger: TGAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCA...ATGTTTTCCTCTGTACGAAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGTGCAGGCAACAGTCATaGGTACAACAAATTGTCTCT +
Preference number: 2 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRCRQQS*VQQIVS
Trigger: AGAGACAATTTGTTGTACCCATGACTGTTGCCTGCA...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp GTCAACAGTTTACGATGTAGGTTTATGTTGGCACTGTGTCTTGTGACAATAAGACCATACCCGTTCAGGTaGGAGTCTTCAGTCCCTGCG +
Preference number: 2 (lower is better)
Translates to: VNSLRCRFMLALCLVTIRPYPFR*ESSVPA
Trigger: CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGG...TCTTATTGTCACAAGACACAGTGCCAACATAAACCTACATCGTAAACTGTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411752.5
ENST00000484726.5
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTTTAAAGGGGTACTCTGTTTTCACCCTGAAATCAAAGATCTGCTGGACTGGAGGCTaGAGGTGGTGCTCAAGTCAA +
Preference number: 2 (lower is better)
Translates to: CVCVCLKGYSVFTLKSKICWTGG*RWCSSQ
Trigger: TTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCA...GATCTTTGATTTCAGGGTGAAAACAGAGTACCCCTTTAAACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CAA 90 bp GAAGTATCATGTCAACTAATTGCCTTTGCTCGAACCCAAGAGTCCTaGCTCAAAGTGCTTTTCTTCCCAGTCCCCACACTGGTTCATGAA +
Preference number: 2 (lower is better)
Translates to: EVSCQLIAFARTQES*LKVLFFPVPTLVHE
Trigger: TTCATGAACCAGTGTGGGGACTGGGAAGAAAAGCACTTTGAGCAAGGACTCTTGGGTTCGAGCAAAGGCAATTAGTTGACATGATACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CAA 90 bp ACACTGTCCCATCCCTTGGTGCAGTTACCTTTTGAAGTACAGACTTaGATTCTGCGGCAGGCTTATTGCAAGAGACTGGTTTTATGCAGA +
Preference number: 2 (lower is better)
Translates to: TLSHPLVQLPFEVQT*ILRQAYCKRLVLCR
Trigger: TCTGCATAAAACCAGTCTCTTGCAATAAGCCTGCCGCAGAATCAAAGTCTGTACTTCAAAAGGTAACTGCACCAAGGGATGGGACAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR TCA 90 bp ACTCCAGCTACAGGAAATATGCGACTCGTCTGGGACAGATCAAACATGACCTTATACATAAGCGCACACTaGCTATGGCAGTTCAAACAC +
Preference number: 2 (lower is better)
Translates to: TPATGNMRLVWDRSNMTLYISAH*LWQFKH
Trigger: GTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTA...TAAGGTCATGTTTGATCTGTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR TCA 90 bp ACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCTACATAAGCGCACACTaGCTATGGCAGTTCAAACAC +
Preference number: 2 (lower is better)
Translates to: TLRVPLLLYILWQMLHMIYISAH*LWQFKH
Trigger: GTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTA...GATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR TCA 90 bp ATGTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATACTCTGTTTTCACCCTaGAATCAAAGATCCCACTCC +
Preference number: 2 (lower is better)
Translates to: MLHMIPPLLPDKLLNIRDTLFSP*NQRSHS
Trigger: GGAGTGGGATCTTTGATTTCAGGGTGAAAACAGAGT...ATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR TCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACAACTCTGTTTTCACCCTaGAATCAAAGATCCCACTCC +
Preference number: 2 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTTLFSP*NQRSHS
Trigger: GGAGTGGGATCTTTGATTTCAGGGTGAAAACAGAGT...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR TCA 90 bp ACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCACTCTGTTTTCACCCTaGAATCAAAGATCCCACTCC +
Preference number: 2 (lower is better)
Translates to: TLRVPLLLYILWQMLHMITLFSP*NQRSHS
Trigger: GGAGTGGGATCTTTGATTTCAGGGTGAAAACAGAGT...GATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR TCA 90 bp ACTCCAGCTACAGGAAATATGCGACTCGTCTGGGACAGATCAAACATGACCTTATCTACCAAACAGGCCTaGATTATAGTACGACTGCAG +
Preference number: 2 (lower is better)
Translates to: TPATGNMRLVWDRSNMTLSTKQA*IIVRLQ
Trigger: CTGCAGTCGTACTATAATTCAGGCCTGTTTGGTAGA...TAAGGTCATGTTTGATCTGTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR GCA 90 bp TGGGGTGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTTTCCCTTTTATTTTTaGAGGCAACAGTCATGGGTA +
Preference number: 2 (lower is better)
Translates to: WGAGHHISSPKIHRGGPCFPFYF*RQQSWV
Trigger: TACCCATGACTGTTGCCTGCAAAAATAAAAGGGAAA...GCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCACCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTTTAAAGGGGTACTCTGTTTTCACCCTGAAATCAAAGATCTGTAGTCCTCTGCCATaGCTCTCCCATACCCGTTCA +
Preference number: 2 (lower is better)
Translates to: CVCVCLKGYSVFTLKSKICSPLP*LSHTRS
Trigger: TGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA...GATCTTTGATTTCAGGGTGAAAACAGAGTACCCCTTTAAACACACACACACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CCA 90 bp GCTACAGTGGCAAGCATGAGTAATGATCAAGAAAGGAACGATCCATGCTGGTGCTGCAGGCAACAGTCATaGGTACAACAAATTGTCTCT +
Preference number: 2 (lower is better)
Translates to: ATVASMSNDQERNDPCWCCRQQS*VQQIVS
Trigger: AGAGACAATTTGTTGTACCCATGACTGTTGCCTGCA...GCACCAGCATGGATCGTTCCTTTCTTGATCATTACTCATGCTTGCCACTGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CCA 90 bp GGGCAGCTGAACCAAAGTTTGCACAGGAAAGCAAATGCACCATATACTAGAAATGCTGAACAGGGCAGCTaGACTAAGATCTGGAATGAG +
Preference number: 2 (lower is better)
Translates to: GQLNQSLHRKANAPYTRNAEQGS*TKIWNE
Trigger: CTCATTCCAGATCTTAGTCCAGCTGCCCTGTTCAGC...ATTTCTAGTATATGGTGCATTTGCTTTCCTGTGCAAACTTTGGTTCAGCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CCA 90 bp CACTTAAGTTTTCAAAGAAGCAAAGGATGCCGTCACAGACAGCATCTCTCTACTCATCAGGGAACTCGATaGGAAAGCCTAGCCCTTGTA +
Preference number: 2 (lower is better)
Translates to: HLSFQRSKGCRHRQHLSTHQGTR*ESLALV
Trigger: TACAAGGGCTAGGCTTTCCCATCGAGTTCCCTGATG...AGTAGAGAGATGCTGTCTGTGACGGCATCCTTTGCTTCTTTGAAAACTTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CCA 90 bp ACATCATATTGCAACCTGGGACTTTGCACTTGTGCATTTCTCTCAAATGCACAGGATTCTCTGGAGGAATaGATACTGCTGCTGGACTGG +
Preference number: 2 (lower is better)
Translates to: TSYCNLGLCTCAFLSNAQDSLEE*ILLLDW
Trigger: CCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATC...CTGTGCATTTGAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCAATATGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CAA 90 bp TCTGGCCACTTTTGCTGTCAAATATGGAGGCTGAGTCCAATAATTTaGTTACTGGAGACACACCAATGGGTCTGGAGTAAGAAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: SGHFCCQIWRLSPII*LLETHQWVWSKKGV
Trigger: CACACCTTTCTTACTCCAGACCCATTGGTGTGTCTCCAGTAACAAAATTATTGGACTCAGCCTCCATATTTGACAGCAAAAGTGGCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR GCA 90 bp ATGGGTACAACAAATTGTCTCTTTGGGGAAGACCAAGAATTATTCTGTCAAAACTGGAGGAATGGATACTaGTGCTGGACTGGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: MGTTNCLFGEDQELFCQNWRNGY*CWTGGW
Trigger: CCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCA...GTTTTGACAGAATAATTCTTGGTCTTCCCCAAAGAGACAATTTGTTGTACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp AATGCATTCAGTGCTACCATGAAACCATTCTGGGCAATGTATCTTGGTAGTTTTGGCAGCCGGAAAGAATaGTGTGTTTCACCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: NAFSATMKPFWAMYLGSFGSRKE*CVSPLS
Trigger: GCTCAGAGGTGAAACACAGCATTCTTTCCGGCTGCC...AAAACTACCAAGATACATTGCCCAGAATGGTTTCATGGTAGCACTGAATGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468187.6
ENST00000471301.3
3UTR-3UTR GCA 90 bp AATGCATTCAGTGCTACCATGAAACCATTCTGGGCAATGTATCTTGGTAGTTTTAAGTCACTTCCTCATTaGCCCACACCCAGGACACTG +
Preference number: 2 (lower is better)
Translates to: NAFSATMKPFWAMYLGSFKSLPH*PTPRTL
Trigger: CAGTGTCCTGGGTGTGGGGCAATGAGGAAGTGACTT...AAAACTACCAAGATACATTGCCCAGAATGGTTTCATGGTAGCACTGAATGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468187.6
ENST00000471301.3
3UTR-3UTR CCA 90 bp ACTCCAGCTACAGGAAATATGCGACTCGTCTGGGACAGATCAAACATGACCTTACAAGACTACCACGTGTaGTTTATCTCTGAGGGAAAA +
Preference number: 2 (lower is better)
Translates to: TPATGNMRLVWDRSNMTLQDYHV*FISEGK
Trigger: TTTTCCCTCAGAGATAAACCACACGTGGTAGTCTTG...TAAGGTCATGTTTGATCTGTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CCA 90 bp AGTCATGGGTACAACAAATTGTCTCTTTGGGGAAGACCAAGAATTATTCTGTCACTGCGTCGGATTCTCTaGAGGAATGGATACTGCTGC +
Preference number: 2 (lower is better)
Translates to: SHGYNKLSLWGRPRIILSLRRIL*RNGYCC
Trigger: GCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAG...TGACAGAATAATTCTTGGTCTTCCCCAAAGAGACAATTTGTTGTACCCATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CAA 90 bp AGACCTGTTACATTGTCTATCCCTAAATCTGCTGCTGTTCTCTCCTaGCTAAAGTTCATATGGAAGATGATACCGATACCTGCACGTGTC +
Preference number: 2 (lower is better)
Translates to: RPVTLSIPKSAAVLS*LKFIWKMIPIPARV
Trigger: GACACGTGCAGGTATCGGTATCATCTTCCATATGAACTTTAGCAAGGAGAGAACAGCAGCAGATTTAGGGATAGACAATGTAACAGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CAA 90 bp TTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCCCACCATaGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCA +
Preference number: 2 (lower is better)
Translates to: LLLYILWQMLHMIPP*LPDKLLNIRDPETS
Trigger: TGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR TCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACAGGCCTGTGGTTATGTTaGGTGACTAATTGTATTTTC +
Preference number: 2 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTGLWLC*VTNCIF
Trigger: GAAAATACAATTAGTCACTCAACATAACCACAGGCC...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR TCA 90 bp CACTTAAGTTTTCAAAGAAGCAAAGGATGCCGTCACAGACAGCATCTCTCTACTGCTTTCATTTCTCTCTaGCAAATCGTGTGGGGAAAC +
Preference number: 2 (lower is better)
Translates to: HLSFQRSKGCRHRQHLSTAFISL*QIVWGN
Trigger: GTTTCCCCACACGATTTGTCAGAGAGAAATGAAAGC...AGTAGAGAGATGCTGTCTGTGACGGCATCCTTTGCTTCTTTGAAAACTTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR TCA 90 bp GTCAACAGTTTACGATGTAGGTTTATGTTGGCACTGTGTCTTGTGACAATAAGATGGAGATTAGGGTTCTaGCTGTGCCGATTTCGGCTT +
Preference number: 2 (lower is better)
Translates to: VNSLRCRFMLALCLVTIRWRLGF*LCRFRL
Trigger: AAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCA...TCTTATTGTCACAAGACACAGTGCCAACATAAACCTACATCGTAAACTGTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411752.5
ENST00000484726.5
3UTR-3UTR TCA 90 bp GTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCAACTAATCTACTGAAGTaGAGGGAATGTTTTTGTGGA +
Preference number: 2 (lower is better)
Translates to: VVHSQGPLVAVHFVANVATNLLK*RECFCG
Trigger: TCCACAAAAACATTCCCTTCACTTCAGTAGATTAGT...TGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR TCA 90 bp GGCAACAGTCATGGGTACAACAAATTGTCTCTTTGGGGAAGACCAAGAATTATTAGGTCAGATAGATTCTaGGGGAGGTGGAAATCAGGA +
Preference number: 2 (lower is better)
Translates to: GNSHGYNKLSLWGRPRIIRSDRF*GRWKSG
Trigger: TCCTGATTTCCACCTCCCTCAGAATCTATCTGACCT...AATAATTCTTGGTCTTCCCCAAAGAGACAATTTGTTGTACCCATGACTGTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR-3UTR CCA 90 bp ATTTTGTGGCAAATGTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGTGTCATCGAGTTCTTTaGTCAACAGTTTACGATGTA +
Preference number: 2 (lower is better)
Translates to: ILWQMLHMIPPLLPDKLLCHRVL*STVYDV
Trigger: TACATCGTAAACTGTTGACCAAAGAACTCGATGACA...CAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACATTTGCCACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CAA 90 bp TCTCTTTGCATCATGAAAAGGAAATCATTCGTCAGCCATGAAGCTTaGTGGTCTATTTGGTGCACAGTTCTGAAGACGGTGGAAATGAGT +
Preference number: 2 (lower is better)
Translates to: SLCIMKRKSFVSHEA*WSIWCTVLKTVEMS
Trigger: ACTCATTTCCACCGTCTTCAGAACTGTGCACCAAATAGACCACAAAGCTTCATGGCTGACGAATGATTTCCTTTTCATGATGCAAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR-3UTR TCA 90 bp GGGCAGCTGAACCAAAGTTTGCACAGGAAAGCAAATGCACCATATACTAGAAATTCTTACTTATGCCACTaGCTTGCAGGAAAATTTGCT +
Preference number: 2 (lower is better)
Translates to: GQLNQSLHRKANAPYTRNSYLCH*LAGKFA
Trigger: AGCAAATTTTCCTGCAAGTCAGTGGCATAAGTAAGA...ATTTCTAGTATATGGTGCATTTGCTTTCCTGTGCAAACTTTGGTTCAGCTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR TCA 90 bp GGGCAGCTGAACCAAAGTTTGCACAGGAAAGCAAATGCACCATATACTAGAAATCCCCACACTGGTTCATaGAATTATTTAGCACAGATT +
Preference number: 2 (lower is better)
Translates to: GQLNQSLHRKANAPYTRNPHTGS*NYLAQI
Trigger: AATCTGTGCTAAATAATTTCATGAACCAGTGTGGGG...ATTTCTAGTATATGGTGCATTTGCTTTCCTGTGCAAACTTTGGTTCAGCTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR GCA 90 bp CAAGACTACCACGTGTGGTTTATCTCTGAGGGAAAATGTGAAGAGAAGTTACTTCCTCTGAAGAATAAATaGCTTGGCTGTTTCACACCA +
Preference number: 2 (lower is better)
Translates to: QDYHVWFISEGKCEEKLLPLKNK*LGCFTP
Trigger: TGGTGTGAAACAGCCAAGGCATTTATTCTTCAGAGG...AAGTAACTTCTCTTCACATTTTCCCTCAGAGATAAACCACACGTGGTAGTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR GCA 90 bp GGGCAGCTGAACCAAAGTTTGCACAGGAAAGCAAATGCACCATATACTAGAAATTTTCTCACTCTCAATTaGTTGGTTTCAGGCTTGCTT +
Preference number: 2 (lower is better)
Translates to: GQLNQSLHRKANAPYTRNFLTLN*LVSGLL
Trigger: AAGCAAGCCTGAAACCAAGCAATTGAGAGTGAGAAA...ATTTCTAGTATATGGTGCATTTGCTTTCCTGTGCAAACTTTGGTTCAGCTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR GCA 90 bp CAAGACTACCACGTGTGGTTTATCTCTGAGGGAAAATGTGAAGAGAAGTTACTTGACAACAAAACAGTCTaGAATGCACACCCTAATGGT +
Preference number: 2 (lower is better)
Translates to: QDYHVWFISEGKCEEKLLDNKTV*NAHPNG
Trigger: ACCATTAGGGTGTGCATTGCAGACTGTTTTGTTGTC...AAGTAACTTCTCTTCACATTTTCCCTCAGAGATAAACCACACGTGGTAGTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CCA 90 bp GGGCAGCTGAACCAAAGTTTGCACAGGAAAGCAAATGCACCATATACTAGAAATTCACTCTCAATTGCTTaGTTTCAGGCTTGCTTTCAT +
Preference number: 2 (lower is better)
Translates to: GQLNQSLHRKANAPYTRNSLSIA*FQACFH
Trigger: ATGAAAGCAAGCCTGAAACCAAGCAATTGAGAGTGA...ATTTCTAGTATATGGTGCATTTGCTTTCCTGTGCAAACTTTGGTTCAGCTGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CAA 90 bp CAGTCCAGTTTGACAAAAGTTAATCTATCATGTTACACTATGGATTaGGAGGGGTCATTGAAAGATGCATTTGTACACCTACGTCCATGG +
Preference number: 2 (lower is better)
Translates to: QSSLTKVNLSCYTMD*EGSLKDAFVHLRPW
Trigger: CCATGGACGTAGGTGTACAAATGCATCTTTCAATGACCCCTCCAAATCCATAGTGTAACATGATAGATTAACTTTTGTCAAACTGGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR TCA 90 bp CACTTAAGTTTTCAAAGAAGCAAAGGATGCCGTCACAGACAGCATCTCTCTACTATAACATTCGGCACTTaGAAGAATCACCAAGTGTTT +
Preference number: 2 (lower is better)
Translates to: HLSFQRSKGCRHRQHLSTITFGT*KNHQVF
Trigger: AAACACTTGGTGATTCTTTCAAGTGCCGAATGTTAT...AGTAGAGAGATGCTGTCTGTGACGGCATCCTTTGCTTCTTTGAAAACTTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CAA 90 bp ATTTGCTCTAATTATAGGGCCACACCCATTACTCTCAAGATGGAATaGTTAACACTTAAGTTTTCAAAGAAGCAAAGGATGCCGTCACAG +
Preference number: 2 (lower is better)
Translates to: ICSNYRATPITLKME*LTLKFSKKQRMPSQ
Trigger: CTGTGACGGCATCCTTTGCTTCTTTGAAAACTTAAGTGTTAACAATTCCATCTTGAGAGTAATGGGTGTGGCCCTATAATTAGAGCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR GCA 90 bp CAAGACTACCACGTGTGGTTTATCTCTGAGGGAAAATGTGAAGAGAAGTTACTTCAAACTATCTTTTCCTaGATATCTAACAGCTGGATG +
Preference number: 2 (lower is better)
Translates to: QDYHVWFISEGKCEEKLLQTIFS*ISNSWM
Trigger: CATCCAGCTGTTAGATATGCAGGAAAAGATAGTTTG...AAGTAACTTCTCTTCACATTTTCCCTCAGAGATAAACCACACGTGGTAGTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR TCA 90 bp AGTCATGGGTACAACAAATTGTCTCTTTGGGGAAGACCAAGAATTATTCTGTCAACTAATCTACTGAAGTaGAGGGAATGTTTTTGTGGA +
Preference number: 2 (lower is better)
Translates to: SHGYNKLSLWGRPRIILSTNLLK*RECFCG
Trigger: TCCACAAAAACATTCCCTTCACTTCAGTAGATTAGT...TGACAGAATAATTCTTGGTCTTCCCCAAAGAGACAATTTGTTGTACCCATGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR GCA 90 bp CAACAGTCATGGGTACAACAAATTGTCTCTTTGGGGAAGACCAAGAATTATTCTTTTCCCTTTTATTTTTaGAGGCAACAGTCATGGGTA +
Preference number: 2 (lower is better)
Translates to: QQSWVQQIVSLGKTKNYSFPFYF*RQQSWV
Trigger: TACCCATGACTGTTGCCTGCAAAAATAAAAGGGAAA...AGAATAATTCTTGGTCTTCCCCAAAGAGACAATTTGTTGTACCCATGACTGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
3UTR CAA 90 bp CTGAACAGGGCAGCTGGACTAAGATCTGGAATGAGTTACATTGGGTaGACTTATTTAAATACAATTAATATCAGAACAAAGAATGCCAAG +
Preference number: 2 (lower is better)
Translates to: LNRAAGLRSGMSYIG*TYLNTINIRTKNAK
Trigger: CTTGGCATTCTTTGTTCTGATATTAATTGTATTTAAATAAGTCAACCCAATGTAACTCATTCCAGATCTTAGTCCAGCTGCCCTGTTCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR GCA 90 bp ATGGGTACAACAAATTGTCTCTTTGGGGAAGACCAAGAATTATTCTGTCAAAACTTTCCCTTTTATTTTTaGAGGCAACAGTCATGGGTA +
Preference number: 2 (lower is better)
Translates to: MGTTNCLFGEDQELFCQNFPFYF*RQQSWV
Trigger: TACCCATGACTGTTGCCTGCAAAAATAAAAGGGAAA...GTTTTGACAGAATAATTCTTGGTCTTCCCCAAAGAGACAATTTGTTGTACCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
3UTR-3UTR CCA 90 bp CAACAGTCATGGGTACAACAAATTGTCTCTTTGGGGAAGACCAAGAATTATTCTAAGACCCTTTCAAAGTaGTCTCTTCATGAAAAATAC +
Preference number: 2 (lower is better)
Translates to: QQSWVQQIVSLGKTKNYSKTLSK*SLHEKY
Trigger: GTATTTTTCATGAAGAGACCACTTTGAAAGGGTCTT...AGAATAATTCTTGGTCTTCCCCAAAGAGACAATTTGTTGTACCCATGACTGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR-3UTR CCA 90 bp ACCATCAATACAATTGTTTTACATCAATGGCCCCTCAAGGCTAAATATTTACAGATTGTTTTACATCAATaGCCCCTCAAGGCTAAATAT +
Preference number: 2 (lower is better)
Translates to: TINTIVLHQWPLKAKYLQIVLHQ*PLKAKY
Trigger: ATATTTAGCCTTGAGGGGCCATTGATGTAAAACAAT...CTGTAAATATTTAGCCTTGAGGGGCCATTGATGTAAAACAATTGTATTGATGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380672.9
ENST00000484726.5
3UTR-3UTR CAA 90 bp GAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCCCCATGTCATCGCGGAGGTCCTaGCTAAGGGAGGGCTGCGAC +
Preference number: 3 (lower is better)
Translates to: ESSVPAGEEASSLTSSPMSSRRS*LREGCD
Trigger: GTCGCAGCCCTCCCTTAGCAAGGACCTCCGCGATGA...CATGGGGCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CAA 90 bp TCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGTCATCGCGGAGGTCCTaGCTAAGGGAGGGCTGCGAC +
Preference number: 3 (lower is better)
Translates to: SLAPSMSSRRIPSSLPASSSRRS*LREGCD
Trigger: GTCGCAGCCCTCCCTTAGCAAGGACCTCCGCGATGA...CGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR TCA 72 bp AGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTaGCATCGAGCCCCATGGGGTGCTGGGCACCATATA +
Preference number: 3 (lower is better)
Translates to: SLQSLRERRRLP*HRAPWGAGHHI
Trigger: TATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CAA 90 bp CTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGTTAAACGAGCTTGTCTaGCATCCAGCTGGGCCAGCA +
Preference number: 3 (lower is better)
Translates to: LGLVCRLPTVTRPVNVIELNELV*HPAGPA
Trigger: TGCTGGCCCAGCTGGATGCAAGACAAGCTCGTTTAA...CTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR-3UTR CAA 90 bp CTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGACTCTCAGGGTCCCCTaGTTGCTGTACATTTTGTGG +
Preference number: 3 (lower is better)
Translates to: LPCLSHTRSGGSLQSLRETLRVP*LLYILW
Trigger: CCACAAAATGTACAGCAACAAGGGGACCCTGAGAGT...CTCCCGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR GCA 72 bp GGAGGTGGTGCTCAAGTCAAGGACCATGTAGTCCTCTaGCATGCCTCTCCCATACCCGTTCAGGTGGGAGTC +
Preference number: 3 (lower is better)
Translates to: GGGAQVKDHVVL*HASPIPVQVGV
Trigger: GACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCCTTGACTTGAGCACCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CCA 72 bp GAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTCTaGAGGAATGGATACTGCTGCTGGACTGGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: EESPHRCLRRIL*RNGYCCWTGGW
Trigger: CCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CAA 90 bp GGGCCTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGATGTAGGTTTATGTaGGCACTGTGTCTTGTGACA +
Preference number: 3 (lower is better)
Translates to: GPRPCVPTPHCHSPRQCHRCRFM*ALCLVT
Trigger: TGTCACAAGACACAGTGCCAACATAAACCTACATCG...ATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411752.5
ENST00000484726.5
3UTR-3UTR CAA 90 bp ATGTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATGCAGGGGCCTCGGCCTaGTGTGCCGACTCCCCACTG +
Preference number: 3 (lower is better)
Translates to: MLHMIPPLLPDKLLNIRDAGASA*CADSPL
Trigger: CAGTGGGGAGTCGGCACACAAGGCCGAGGCCCCTGC...ATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR GCA 72 bp TCTGCAGGTCCCTACGATCAATACGCTCTCACCCACTaGGAGGCAGAGCTATGCCAGTCTTTTCTCTCGAGC +
Preference number: 3 (lower is better)
Translates to: SAGPYDQYALTH*EAELCQSFLSS
Trigger: GCTCGAGAGAAAAGACTGGCATAGCTCTGCCTCGCAGTGGGTGAGAGCGTATTGATCGTAGGGACCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 72 bp TGGTGCTCAAGTCAAGGACCATGTAGTCCTCTGCCATaGCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAG +
Preference number: 3 (lower is better)
Translates to: WCSSQGPCSPLP*LSHTRSGGSLQ
Trigger: CTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCCTTGACTTGAGCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR GCA 72 bp CCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTaGCTGCGTCGGATTCTCTGGAGGAATGGATACTGC +
Preference number: 3 (lower is better)
Translates to: PRQCHREESPHR*LRRILWRNGYC
Trigger: GCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CCA 72 bp AGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTaGTGCTCAAGTCAAGGACCATGTAGTCCTCTGCCA +
Preference number: 3 (lower is better)
Translates to: RNGYCCWTGGWR*CSSQGPCSPLP
Trigger: TGGCAGAGGACTACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CCA 72 bp CTCTGGAGGAATGGATACTGCTGCTGGACTGGAGGCTaGAGGTGGTGCTCAAGTCAAGGACCATGTAGTCCT +
Preference number: 3 (lower is better)
Translates to: LWRNGYCCWTGG*RWCSSQGPCSP
Trigger: AGGACTACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CCA 72 bp TCGGATTCTCTGGAGGAATGGATACTGCTGCTGGACTaGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATG +
Preference number: 3 (lower is better)
Translates to: SDSLEEWILLLD*RLEVVLKSRTM
Trigger: CATGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CAA 90 bp TGGGGTGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCCACATGATCCCACCATaGCTCCCAGACAAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: WGAGHHISSPKIHRGGPCHMIPP*LPDKLL
Trigger: CAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTG...GCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR GCA 72 bp GATCAATACGCTCTCACCCACTGCGAGGCAGAGCTATaGCAGTCTTTTCTCTCGAGCCAACATTTCCAGTGC +
Preference number: 3 (lower is better)
Translates to: DQYALTHCEAEL*QSFLSSQHFQC
Trigger: GCACTGGAAATGTTGGCTCGAGAGAAAAGACTGGCATAGCTCTGCCTCGCAGTGGGTGAGAGCGTATTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 72 bp GTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTaGGTCGGATTCTCTGGAGGAATGGATACTGCTGCT +
Preference number: 3 (lower is better)
Translates to: VNVIEKNPLIAA*VGFSGGMDTAA
Trigger: AGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CCA 72 bp CACTTAATAGCTGGAGAGGGCATCGAGAGGCAGCCTTaGGCTTCCCACAGATACAGTAGGTGTGTGTATGTG +
Preference number: 3 (lower is better)
Translates to: HLIAGEGIERQP*ASHRYSRCVYV
Trigger: CACATACACACACCTACTGTATCTGTGGGAAGCCCAAGGCTGCCTCTCGATGCCCTCTCCAGCTATTAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CAA 90 bp TGGGTACAACAAATTGTCTCTTTGGGGAAGACCAAGAATTATTCTGTCAAAACTGCAGGGGCCTCGGCCTaGTGTGCCGACTCCCCACTG +
Preference number: 3 (lower is better)
Translates to: WVQQIVSLGKTKNYSVKTAGASA*CADSPL
Trigger: CAGTGGGGAGTCGGCACACAAGGCCGAGGCCCCTGC...AGTTTTGACAGAATAATTCTTGGTCTTCCCCAAAGAGACAATTTGTTGTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CAA 90 bp GCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTATTTTGTGGCAAATGTaGCACATGATCCCACCATTG +
Preference number: 3 (lower is better)
Translates to: APSMSSRRIPSSLPASDSILWQM*HMIPPL
Trigger: CAATGGTGGGATCATGTGCAACATTTGCCACAAAAT...AGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR TCA 72 bp GGGCTGAAGCAGAGAGGGTGTTGTCTGCTGTTAGTGTaGCAGTCTTGTCAGCAGCGTTCACATTACTGGAAG +
Preference number: 3 (lower is better)
Translates to: GLKQRGCCLLLV*QSCQQRSHYWK
Trigger: CTTCCAGTAATGTGAACGCTGCTGACAAGACTGTCACACTAACAGCAGACAACACCCTCTCTGCTTCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 72 bp GCACATTGTCTGGGAGCTCAAGAGCATCATACCTCATaGATCATGCTTCTCGCAGTGGCCACAGCACCGATT +
Preference number: 3 (lower is better)
Translates to: AHCLGAQEHHTS*IMLLAVATAPI
Trigger: AATCGGTGCTGTGGCCACTGCGAGAAGCATGATTCATGAGGTATGATGCTCTTGAGCTCCCAGACAATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 72 bp GTCTGGGAGCTCAAGAGCATCATACCTCATGAATCATaGTTCTCGCAGTGGCCACAGCACCGATTCACAGAT +
Preference number: 3 (lower is better)
Translates to: VWELKSIIPHES*FSQWPQHRFTD
Trigger: ATCTGTGAATCGGTGCTGTGGCCACTGCGAGAAGCATGATTCATGAGGTATGATGCTCTTGAGCTCCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CAA 90 bp CCATTTATGGTGAGCAACACTCCAGCTACAGGAAATATGCGACTCGTCTGGGACCTGGTGGCCAACAAATaGGCCTGTGGTTATGTTGAG +
Preference number: 3 (lower is better)
Translates to: PFMVSNTPATGNMRLVWDLVANK*ACGYVE
Trigger: CTCAACATAACCACAGGCCAATTTGTTGGCCACCAG...GTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGTGTTGCTCACCATAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CAA 90 bp TCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTATGTCATCGAGTTCTTaGGTCAACAGTTTACGATGT +
Preference number: 3 (lower is better)
Translates to: SPRQCHREESPHRCLRRIMSSSS*VNSLRC
Trigger: ACATCGTAAACTGTTGACCAAAGAACTCGATGACAT...AATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CAA 90 bp TGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCTTGTTGCTGTACATTTaGTGGCAAATGTTGCACATG +
Preference number: 3 (lower is better)
Translates to: CSPLPCLSHTRSGGSLQSLLLYI*WQMLHM
Trigger: CATGTGCAACATTTGCCACAAAATGTACAGCAACAA...GGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR TCA 72 bp AATGTGACTGTTTGTAATGGGGCCAACTATCTTCTCTaGGATGCGCTGCGGGAAGGTTGGAAGGAAGCATGG +
Preference number: 3 (lower is better)
Translates to: NVTVCNGANYLL*DALREGWKEAW
Trigger: CCATGCTTCCTTCCAACCTTCCCGCAGCGCATCTCAGAGAAGATAGTTGGCCCCATTACAAACAGTCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 72 bp CCCAAAGGAACTTCAGCTATTTCATGCAGCTGTACTTaGTTTCCTAACCCCTTCCTCAGAGCCGACTCACCT +
Preference number: 3 (lower is better)
Translates to: PKGTSAISCSCT*FPNPFLRADSP
Trigger: AGGTGAGTCGGCTCTGAGGAAGGGGTTAGGAAAGCAAGTACAGCTGCATGAAATAGCTGAAGTTCCTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CCA 72 bp AAGAGCATCATACCTCATGAATCATGCTTCTCGCAGTaGCCACAGCACCGATTCACAGATGGGGTAGAGGAT +
Preference number: 3 (lower is better)
Translates to: KSIIPHESCFSQ*PQHRFTDGVED
Trigger: ATCCTCTACCCCATCTGTGAATCGGTGCTGTGGCCACTGCGAGAAGCATGATTCATGAGGTATGATGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CCA 72 bp GCTGCGACGAGTCCAGGCCCATGTCATCGAGTTCTTTaGTCAACAGTTTACGATGTAGGTTTATGTTGGCAC +
Preference number: 3 (lower is better)
Translates to: AATSPGPCHRVL*STVYDVGLCWH
Trigger: GTGCCAACATAAACCTACATCGTAAACTGTTGACCAAAGAACTCGATGACATGGGCCTGGACTCGTCGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411752.5
ENST00000484726.5
3UTR CCA 72 bp TGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTaGCAAATGTTGCACATGATCCCACCATTGCTCCCA +
Preference number: 3 (lower is better)
Translates to: CTLRVPLLLYIL*QMLHMIPPLLP
Trigger: TGGGAGCAATGGTGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CAA 90 bp TGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGCTCAGGGTCCCCTTGTaGCTGTACATTTTGTGGCAA +
Preference number: 3 (lower is better)
Translates to: CTLRVPLLLYILWQMLHMLRVPL*LYILWQ
Trigger: TTGCCACAAAATGTACAGCAACAAGGGGACCCTGAG...CATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CAA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCGAGGAAAACATCATATaGCAACCTGGGACTTTGCAC +
Preference number: 3 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESEENII*QPGTLH
Trigger: GTGCAAAGTCCCAGGTTGCAATATGATGTTTTCCTC...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR TCA 72 bp ATGCTGGTGCCATTCGCACCTACTCCTCTGTTAGGATaGAAACGAGGTGTTACCACTGGCCTTTTCTATAGC +
Preference number: 3 (lower is better)
Translates to: MLVPFAPTPLLG*KRGVTTGLFYS
Trigger: GCTATAGAAAAGGCCAGTGGTAACACCTCGTTTTCATCCTAACAGAGGAGTAGGTGCGAATGGCACCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 72 bp TTATACTGGCACTGGCAGGAAAATGGTGAGATTCTCTaGAGGGCAGCTGAACCAAAGTTTGCACAGGAAAGC +
Preference number: 3 (lower is better)
Translates to: LYWHWQENGEIL*RAAEPKFAQES
Trigger: GCTTTCCTGTGCAAACTTTGGTTCAGCTGCCCTGCAGAGAATCTCACCATTTTCCTGCCAGTGCCAGTATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CCA 72 bp CTGAGGGAGGTGGAAATCAGGAAGACCCTTTCAAAGTaGTCTCTTCATGAAAAATACCACCGGTGCACTCAG +
Preference number: 3 (lower is better)
Translates to: LREVEIRKTLSK*SLHEKYHRCTQ
Trigger: CTGAGTGCACCGGTGGTATTTTTCATGAAGAGACCACTTTGAAAGGGTCTTCCTGATTTCCACCTCCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR-3UTR CAA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTCTCACTCTCAATTGCTaGGTTTCAGGCTTGCTTTCA +
Preference number: 3 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTLTLNC*VSGLLS
Trigger: TGAAAGCAAGCCTGAAACCAAGCAATTGAGAGTGAG...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CAA 90 bp GTGTGTGTGTATGTGCATGTGTGTGTGTGTGTGTTTAAAGGGGTACTCTGTTTTCACATGATCCCACCATaGCTCCCAGACAAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: VCVYVHVCVCVFKGVLCFHMIPP*LPDKLL
Trigger: CAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTG...AAAACAGAGTACCCCTTTAAACACACACACACACACATGCACATACACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CAA 90 bp AAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGACTGTCAGCCATGAAGCTTaGTGGTCTATTTGGTGCACA +
Preference number: 3 (lower is better)
Translates to: KHVGHLVRAGICSVHSETVSHEA*WSIWCT
Trigger: TGTGCACCAAATAGACCACAAAGCTTCATGGCTGAC...AGTCTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR-3UTR CAA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTGTACGACTGCAGAATTaGCAACAAATTAGACAGCCA +
Preference number: 3 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTVRLQN*QQIRQP
Trigger: TGGCTGTCTAATTTGTTGCAAATTCTGCAGTCGTAC...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 72 bp ATGCACACTGTCCCATCCCTTGGTGCAGTTACCTTTTaGAGTACAGACTTTGATTCTGCGGCAGGCTTATTG +
Preference number: 3 (lower is better)
Translates to: MHTVPSLGAVTF*STDFDSAAGLL
Trigger: CAATAAGCCTGCCGCAGAATCAAAGTCTGTACTTCAAAAGGTAACTGCACCAAGGGATGGGACAGTGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 72 bp AAATTACACACTAGAAAACCCAAGTCACTTCCTCATTaGCCCACACCCAGGACACTGCACAGTATAAGGCAG +
Preference number: 3 (lower is better)
Translates to: KLHTRKPKSLPH*PTPRTLHSIRQ
Trigger: CTGCCTTATACTGTGCAGTGTCCTGGGTGTGGGGCAATGAGGAAGTGACTTGGGTTTTCTAGTGTGTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468187.6
ENST00000471301.3
3UTR GCA 72 bp TCATTCGTCAGCCATGAAGCTTTGTGGTCTATTTGGTaGACAGTTCTGAAGACGGTGGAAATGAGTGGTGCA +
Preference number: 3 (lower is better)
Translates to: SFVSHEALWSIW*TVLKTVEMSGA
Trigger: TGCACCACTCATTTCCACCGTCTTCAGAACTGTGCACCAAATAGACCACAAAGCTTCATGGCTGACGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR CCA 72 bp GAGGATGATGAAACTACACAAGGAAGGACGGGTATGTaGGCAACAGTGATGACAGATAACTCACTGGTCAGT +
Preference number: 3 (lower is better)
Translates to: EDDETTQGRTGM*ATVMTDNSLVS
Trigger: ACTGACCAGTGAGTTATCTGTCATCACTGTTGCCCACATACCCGTCCTTCCTTGTGTAGTTTCATCATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CAA 90 bp ACTCCAGCTACAGGAAATATGCGACTCGTCTGGGACAGATCAAACATGACCTTAACAATCATGGCTTTGTaGTGTTGCTACAGTGGCAAG +
Preference number: 3 (lower is better)
Translates to: TPATGNMRLVWDRSNMTLTIMAL*CCYSGK
Trigger: CTTGCCACTGTAGCAACACAACAAAGCCATGATTGT...TAAGGTCATGTTTGATCTGTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CAA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGATGTCATCGAGTTCTTaGGTCAACAGTTTACGATGT +
Preference number: 3 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRMSSSS*VNSLRC
Trigger: ACATCGTAAACTGTTGACCAAAGAACTCGATGACAT...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CAA 90 bp TGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATTTTGTGGCAAATGTaGCACATGATCCCACCATTG +
Preference number: 3 (lower is better)
Translates to: CTLRVPLLLYILWQMLHMILWQM*HMIPPL
Trigger: CAATGGTGGGATCATGTGCAACATTTGCCACAAAAT...CATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR TCA 72 bp GAAGTGAAGGGAATGTTTTTGTGGAGATTAGGGTTCTaGCTGTGCCGATTTCGGCTTCGTACAGAGGAAAAC +
Preference number: 3 (lower is better)
Translates to: EVKGMFLWRLGF*LCRFRLRTEEN
Trigger: GTTTTCCTCTGTACGAAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCACAAAAACATTCCCTTCACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR CCA 72 bp AGCAACACTCCAGCTACAGGAAATATGCGACTCGTCTaGGACAGATCAAACATGACCTTAGTACTAACGCAA +
Preference number: 3 (lower is better)
Translates to: SNTPATGNMRLV*DRSNMTLVLTQ
Trigger: TTGCGTTAGTACTAAGGTCATGTTTGATCTGTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGTGTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CAA 90 bp CACTTAAGTTTTCAAAGAAGCAAAGGATGCCGTCACAGACAGCATCTCTCTACTATAAGGGTTAGGGCCTaGGAAATGAGTGTTCGACTC +
Preference number: 3 (lower is better)
Translates to: HLSFQRSKGCRHRQHLSTIRVRA*EMSVRL
Trigger: GAGTCGAACACTCATTTCCAAGGCCCTAACCCTTAT...AGTAGAGAGATGCTGTCTGTGACGGCATCCTTTGCTTCTTTGAAAACTTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CAA 90 bp TGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGGGCAAGAACAGTAGATaGTTCCTTTATAAGGAAGGT +
Preference number: 3 (lower is better)
Translates to: CTLRVPLLLYILWQMLHMGKNSR*FLYKEG
Trigger: ACCTTCCTTATAAAGGAACAATCTACTGTTCTTGCC...CATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR TCA 72 bp GTACATACAGTATTTAGGAAGCTACCAACGTCACAATaGTTAGATCAGGGTGATGCACACTGTCCCATCCCT +
Preference number: 3 (lower is better)
Translates to: VHTVFRKLPTSQ*LDQGDAHCPIP
Trigger: AGGGATGGGACAGTGTGCATCACCCTGATCTAATCATTGTGACGTTGGTAGCTTCCTAAATACTGTATGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CAA 90 bp TTGCTGTACATTTTGTGGCAAATGTTGCACATGATCCCACCATTGCTCCCAGACATGTCATCGAGTTCTTaGGTCAACAGTTTACGATGT +
Preference number: 3 (lower is better)
Translates to: LLYILWQMLHMIPPLLPDMSSSS*VNSLRC
Trigger: ACATCGTAAACTGTTGACCAAAGAACTCGATGACAT...GTCTGGGAGCAATGGTGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTTTAAAGGGGTACTCTGTTTTCACCCTGAAATCAAAGATCCCTGGGACTTTGCACTaGTGCATTTCTCTCAAATGC +
Preference number: 3 (lower is better)
Translates to: CVCVCLKGYSVFTLKSKIPGTLH*CISLKC
Trigger: GCATTTGAGAGAAATGCACAAGTGCAAAGTCCCAGG...GATCTTTGATTTCAGGGTGAAAACAGAGTACCCCTTTAAACACACACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR TCA 72 bp CCAGGACTTATTGCCACTTCTCTGACAAAACACAGGTaGACACATTCATGTTTCCAAGCAAGGGAAACTCTA +
Preference number: 3 (lower is better)
Translates to: PGLIATSLTKHR*THSCFQARETL
Trigger: TAGAGTTTCCCTTGCTTGGAAACATGAATGTGTTCACCTGTGTTTTGTCAGAGAAGTGGCAATAAGTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CCA 72 bp ACATCTCAAGTGAACCTATTAACTCAGCACATTGTCTaGGAGCTCAAGAGCATCATACCTCATGAATCATGC +
Preference number: 3 (lower is better)
Translates to: TSQVNLLTQHIV*ELKSIIPHESC
Trigger: GCATGATTCATGAGGTATGATGCTCTTGAGCTCCCAGACAATGTGCTGAGTTAATAGGTTCACTTGAGATGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CCA 72 bp ATGAAAAGGAAATCATTCGTCAGCCATGAAGCTTTGTaGTCTATTTGGTGCACAGTTCTGAAGACGGTGGAA +
Preference number: 3 (lower is better)
Translates to: MKRKSFVSHEAL*SIWCTVLKTVE
Trigger: TTCCACCGTCTTCAGAACTGTGCACCAAATAGACCACAAAGCTTCATGGCTGACGAATGATTTCCTTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR GCA 72 bp GAGATACTTAAAAAGTGTCAGCTGTCCAGGACTTATTaGCACTTCTCTGACAAAACACAGGTGAACACATTC +
Preference number: 3 (lower is better)
Translates to: EILKKCQLSRTY*HFSDKTQVNTF
Trigger: GAATGTGTTCACCTGTGTTTTGTCAGAGAAGTGGCAATAAGTCCTGGACAGCTGACACTTTTTAAGTATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 72 bp CTTGCTAAAGTTCATATGGAAGATGATACCGATACCTaGACGTGTCTTACCTGGCTGACTAATATCTTACTG +
Preference number: 3 (lower is better)
Translates to: LAKVHMEDDTDT*TCLTWLTNILL
Trigger: CAGTAAGATATTAGTCAGCCAGGTAAGACACGTGCAGGTATCGGTATCATCTTCCATATGAACTTTAGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CCA 72 bp ATTTCAACTCCCTCTGGCCACTTTTGCTGTCAAATATaGAGGCTGAGTCCAATAATTTTGTTACTGGAGACA +
Preference number: 3 (lower is better)
Translates to: ISTPSGHFCCQI*RLSPIILLLET
Trigger: TGTCTCCAGTAACAAAATTATTGGACTCAGCCTCCATATTTGACAGCAAAAGTGGCCAGAGGGAGTTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 72 bp CAATTACGCATCCTTTTATATTTGATGGCCAAGTGCTaGACTGGAAAGCACACTATTAGTTTGTGTCCCTTC +
Preference number: 3 (lower is better)
Translates to: QLRILLYLMAKC*TGKHTISLCPF
Trigger: GAAGGGACACAAACTAATAGTGTGCTTTCCAGTTCAGCACTTGGCCATCAAATATAAAAGGATGCGTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 72 bp ATCTATCATGTTACACTATGGATTTGGAGGGGTCATTaGAAGATGCATTTGTACACCTACGTCCATGGTTTG +
Preference number: 3 (lower is better)
Translates to: IYHVTLWIWRGH*KMHLYTYVHGL
Trigger: CAAACCATGGACGTAGGTGTACAAATGCATCTTTCAATGACCCCTCCAAATCCATAGTGTAACATGATAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 72 bp GACATAATGACAGGTAGAATGCATTCAGTGCTACCATaGAACCATTCTGGGCAATGTATCTTGGTAGTTTTG +
Preference number: 3 (lower is better)
Translates to: DIMTGRMHSVLP*NHSGQCILVVL
Trigger: CAAAACTACCAAGATACATTGCCCAGAATGGTTTCATGGTAGCACTGAATGCATTCTACCTGTCATTATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468187.6
ENST00000471301.3
3UTR GCA 72 bp AGGAACTTAAGAAGTATCATGTCAACTAATTGCCTTTaGTCGAACCCAAGAGTCCTTGCTCAAAGTGCTTTT +
Preference number: 3 (lower is better)
Translates to: RNLRSIMSTNCL*SNPRVLAQSAF
Trigger: AAAAGCACTTTGAGCAAGGACTCTTGGGTTCGAGCAAAGGCAATTAGTTGACATGATACTTCTTAAGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 72 bp ATACTGAGGAACTTAAGAAGTATCATGTCAACTAATTaGCTTTGCTCGAACCCAAGAGTCCTTGCTCAAAGT +
Preference number: 3 (lower is better)
Translates to: ILRNLRSIMSTN*LCSNPRVLAQS
Trigger: ACTTTGAGCAAGGACTCTTGGGTTCGAGCAAAGGCAATTAGTTGACATGATACTTCTTAAGTTCCTCAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 72 bp TTTGGGCTTTTGTATCCTGAAATATTATCCTGCCTCTaGAGAATAAATGCCTTGGCTGTTTCACACCACATA +
Preference number: 3 (lower is better)
Translates to: FGLLYPEILSCL*RINALAVSHHI
Trigger: TATGTGGTGTGAAACAGCCAAGGCATTTATTCTTCAGAGGCAGGATAATATTTCAGGATACAAAAGCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR TCA 72 bp AAAGACAGTATGCCGAATAACATAGTTATTGCCGAATaGGCACAGAAAATCATTTTGCGCAAGATGTGGGAA +
Preference number: 3 (lower is better)
Translates to: KDSMPNNIVIAE*AQKIILRKMWE
Trigger: TTCCCACATCTTGCGCAAAATGATTTTCTGTGCTCATTCGGCAATAACTATGTTATTCGGCATACTGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 72 bp AAAACAGTCTGCAATGCACACCCTAATGGTTTTGGCTaGAGACTGAACTTGAGTAAATATCATCATTTAGTC +
Preference number: 3 (lower is better)
Translates to: KTVCNAHPNGFG*RLNLSKYHHLV
Trigger: GACTAAATGATGATATTTACTCAAGTTCAGTCTGCAGCCAAAACCATTAGGGTGTGCATTGCAGACTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR GCA 72 bp TTTCTTCAAGATATTTCAACTCCCTCTGGCCACTTTTaGTGTCAAATATGGAGGCTGAGTCCAATAATTTTG +
Preference number: 3 (lower is better)
Translates to: FLQDISTPSGHF*CQIWRLSPIIL
Trigger: CAAAATTATTGGACTCAGCCTCCATATTTGACAGCAAAAGTGGCCAGAGGGAGTTGAAATATCTTGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR-3UTR CAA 90 bp TGGGTACAACAAATTGTCTCTTTGGGGAAGACCAAGAATTATTCTGTCAAAACTTTGTTGCTGTACATTTaGTGGCAAATGTTGCACATG +
Preference number: 3 (lower is better)
Translates to: WVQQIVSLGKTKNYSVKTLLLYI*WQMLHM
Trigger: CATGTGCAACATTTGCCACAAAATGTACAGCAACAA...AGTTTTGACAGAATAATTCTTGGTCTTCCCCAAAGAGACAATTTGTTGTACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
3UTR TCA 72 bp TACATCAATGGCCCCTCAAGGCTAAATATTTACAGGTaGATCTGCCATGCTTTAATTGAAGATTCTTTCAAA +
Preference number: 3 (lower is better)
Translates to: YINGPSRLNIYR*ICHALIEDSFK
Trigger: TTTGAAAGAATCTTCAATTAAAGCATGGCAGATTCACCTGTAAATATTTAGCCTTGAGGGGCCATTGATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380672.9
ENST00000484726.5
CDS-3UTR GCA 90 bp TGCCAGGGAGGGCAGGGGCCTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGGTCCAGCCAAGGCCGTaGAGTATGTGCAGTACCTCC +
Preference number: 4 (lower is better)
Translates to: CQGGQGPRPCVPTPHCHSVQPRP*SMCSTS
Trigger: GGAGGTACTGCACATACTGCACGGCCTTGGCTGGAC...CGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCCCCTGCCCTCCCTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCGCAGCCCCCGCCTCTTaGTCTCCTCTTAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: RWESSVPAGEEASSLTSSAAPAS*SPLSGR
Trigger: GCGGCCGCTAAGAGGAGACCAAGAGGCGGGGGCTGC...GCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGGCCTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCACTGCTGGCACTACTaGCTCAGAGGGTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GPRPCVPTPHCHSPRQCHHCWHY*LRGWRG
Trigger: CCCCCGCCACCCTCTGAGCCAGTAGTGCCAGCAGTG...ATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGCTTCAGCCCCTAGGCTaGCAGGGAGGGCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSAMPLPYPFRWESSVPALQPLG*QGGQGP
Trigger: AGGCCCCTGCCCTCCCTGGCAGCCTAGGGGCTGAAG...CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACCATGCAAGGCGGCCATaGTGGCACCCCCACCATTGT +
Preference number: 4 (lower is better)
Translates to: PVQVGVFSPCGRGGVFPDHARRP*WHPHHC
Trigger: ACAATGGTGGGGGTGCCAGCATGGCCGCCTTGCATG...GTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCTGAACGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTTCAGCCCCTAGGCTaGCAGGGAGGGCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SPRQCHREESPHRCLRRILQPLG*QGGQGP
Trigger: AGGCCCCTGCCCTCCCTGGCAGCCTAGGGGCTGAAG...AATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCGGGAGAGACACAGGCTaGCTCGGTTTTGGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RWESSVPAGEEASSLTSSGRDTG*LGFGLH
Trigger: GTGGAGCCCAAAACCGAGCCAGCCTGTGTCTCTCCC...GCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGCACTGCTGGCACTACTaGCTCAGAGGGTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SLAPSMSSRRIPSSLPASHCWHY*LRGWRG
Trigger: CCCCCGCCACCCTCTGAGCCAGTAGTGCCAGCAGTG...CGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TGCCAGGGAGGGCAGGGGCCTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGGATTCTCTGGAGGAATaGATACTGCTGCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: CQGGQGPRPCVPTPHCHSDSLEE*ILLLDW
Trigger: CCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATC...CGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCCCCTGCCCTCCCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGCGGTCCAGCACCTTaGCAGCAGCATCCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LCHASPIPVQVGVFSPCGSGPAP*QQHPEG
Trigger: TCCTTCAGGATGCTGCTGGCAAGGTGCTGGACCGCT...CCCGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGATGCTGGTTGTCAAGTaGAGCCCCCGCCTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LPCLSHTRSGGSLQSLREMLVVK*SPRLLV
Trigger: GACCAAGAGGCGGGGGCTGCACTTGACAACCAGCAT...CTCCCGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACGGTGGCCATCATCACTaGTGGCACTACTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PVQVGVFSPCGRGGVFPDGGHHH*WHYWLR
Trigger: TCTGAGCCAGTAGTGCCAGCAGTGATGATGGCCACC...GTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCTGAACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGGCCTCGGCCTTGTGTaGCGACTCCCCACTGTCACT +
Preference number: 4 (lower is better)
Translates to: SLAPSMSSRRIPSSLPASGLGLV*RLPTVT
Trigger: AGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCC...CGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TGCCAGGGAGGGCAGGGGCCTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGTGGTTCCGAACTGCATaGAGTTGTCAGTACAGGAGT +
Preference number: 4 (lower is better)
Translates to: CQGGQGPRPCVPTPHCHSWFRTA*SCQYRS
Trigger: ACTCCTGTACTGACAACTCCATGCAGTTCGGAACCA...CGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCCCCTGCCCTCCCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCCCCATGATACTGCTGCTGGACTaGAGGCTGGAGGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: ESSVPAGEEASSLTSSPMILLLD*RLEVVL
Trigger: GAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTAT...CATGGGGCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACTTGCCAGCAGCATCCTaGAGGATGTATCCTCGGACA +
Preference number: 4 (lower is better)
Translates to: PVQVGVFSPCGRGGVFPDLPAAS*RMYPRT
Trigger: TGTCCGAGGATACATCCTTCAGGATGCTGCTGGCAA...GTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCTGAACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CATTGCCCCACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAATGCTGTGCAACGGATGGCCATaGGCTGCAGCGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HCPTPRTLHSIRQPERMLCNGWP*AAAASQ
Trigger: CTGGGAGGCCGCTGCAGCTCATGGCCATCCGTTGCA...CAGCATTCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTGGGGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471301.3
CDS-3UTR GCA 90 bp TTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGGGGCTTTTTCTTGGGTaGCAGGTCAGCACTGGGCTC +
Preference number: 4 (lower is better)
Translates to: FRWESSVPAGEEASSLTSGLFLG*QVSTGL
Trigger: GAGCCCAGTGCTGACCTGGCACCCAAGAAAAAGCCC...CGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCCATGCAAGGCGGCCATaGTGGCACCCCCACCATTGT +
Preference number: 4 (lower is better)
Translates to: VVLCHASPIPVQVGVFSPHARRP*WHPHHC
Trigger: ACAATGGTGGGGGTGCCAGCATGGCCGCCTTGCATG...GGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGGACCATGTAGTCCTCTaGCATGCCTCTCCCATACCC +
Preference number: 4 (lower is better)
Translates to: LCHASPIPVQVGVFSPCGDHVVL*HASPIP
Trigger: GGGTATGGGAGAGGCATGGCAGAGGACTACATGGTC...CCCGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGCAATCTCCACTTGGGTaGGGTGGTACAGGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: SSAMPLPYPFRWESSVPAQSPLG*GGTGAA
Trigger: CGCAGCACCTGTACCACCCCACCCAAGTGGAGATTG...CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCCCCATGTGCACAATCTCCACTTaGGTGGGGTGGTACAGGTGC +
Preference number: 4 (lower is better)
Translates to: ESSVPAGEEASSLTSSPMCTIST*VGWYRC
Trigger: GCACCTGTACCACCCCACCCAAGTGGAGATTGTGCA...CATGGGGCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACTGTGAAGGCGAGGATTaGGGTTTGCACTGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: PVQVGVFSPCGRGGVFPDCEGED*GLHCGD
Trigger: ATCGCCACAGTGCAAACCCCAATCCTCGCCTTCACA...GTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCTGAACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGGCCTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATATTCCTCGCCCAGTTTaGGCTCCGAAGACTCAGACT +
Preference number: 4 (lower is better)
Translates to: GPRPCVPTPHCHSPRQCHIPRPV*APKTQT
Trigger: AGTCTGAGTCTTCGGAGCCCAAACTGGGCGAGGAAT...ATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCGCAAGGCGGCCATGCTaGCACCCCCACCATTGTACA +
Preference number: 4 (lower is better)
Translates to: EASSLTSSPMGCWAPYIFARRPC*HPHHCT
Trigger: TGTACAATGGTGGGGGTGCCAGCATGGCCGCCTTGC...GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGTTGATGACGTCCTGGTaGGAGGGCTCACTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SSAMPLPYPFRWESSVPALMTSW*EGSLWF
Trigger: GAACCACAGTGAGCCCTCTCACCAGGACGTCATCAA...CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GGGCTGCGACGAGTCCAGGCCCATGTCATCGAGTTCTTTGGTCAACAGTTTACGAGGAGGCGTCTTCCCTaGCATCGAGCCCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: GLRRVQAHVIEFFGQQFTRRRLP*HRAPWG
Trigger: ACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCCT...CGTAAACTGTTGACCAAAGAACTCGATGACATGGGCCTGGACTCGTCGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCTGCAGTTTACCAGTGTaGAACGGATGGCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: RWESSVPAGEEASSLTSSCSLPV*NGWPVG
Trigger: CCCAACAGGCCATCCGTTGCACACTGGTAAACTGCA...GCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGGCCGTGCAGTATGTaGAGTACCTCCTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LCHASPIPVQVGVFSPCGRPCSM*STSSCF
Trigger: GAAGCAAGAGGAGGTACTGCACATACTGCACGGCCT...CCCGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCCCCATGGCGAGGATTGGGGTTTaGACTGTGGCGATTACGACT +
Preference number: 4 (lower is better)
Translates to: ESSVPAGEEASSLTSSPMARIGV*TVAITT
Trigger: AGTCGTAATCGCCACAGTGCAAACCCCAATCCTCGC...CATGGGGCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCATGCAAGGCGGCCATaGTGGCACCCCCACCATTGT +
Preference number: 4 (lower is better)
Translates to: CSPLPCLSHTRSGGSLQSHARRP*WHPHHC
Trigger: ACAATGGTGGGGGTGCCAGCATGGCCGCCTTGCATG...GGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGGGAGGCTGGAGGTGGTaGTCAAGTCAAGGACCATGT +
Preference number: 4 (lower is better)
Translates to: FRWESSVPAGEEASSLTSGGWRW*SSQGPC
Trigger: ACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCC...CGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTCCCCTCATCGCTGCCTaGGTCGGATTCTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: APSMSSRRIPSSLPASDSPLIAA*VGFSGG
Trigger: TCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGG...AGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GGGCCTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATTATGTTGGCAGGAGATaGAGGCTGTCTCGATGTCCT +
Preference number: 4 (lower is better)
Translates to: GPRPCVPTPHCHSPRQCHYVGRR*RLSRCP
Trigger: AGGACATCGAGACAGCCTGCATCTCCTGCCAACATA...ATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418777.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTCGGGAGAGACACAGGCTaGCTCGGTTTTGGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PRQCHREESPHRCLRRILGRDTG*LGFGLH
Trigger: GTGGAGCCCAAAACCGAGCCAGCCTGTGTCTCTCCC...GAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CTGCCTGCGTCGGATTCTCTGGAGGAATGGATACTGCTGCTGGACTGGAGGCTGCACTGGGCTCATGGGTaGCCATCATCACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LPASDSLEEWILLLDWRLHWAHG*PSSLLA
Trigger: TGCCAGCAGTGATGATGGCCACCCATGAGCCCAGTG...CAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGTCCTGGGCTTTTTCTTaGGTGCCAGGTCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: FRWESSVPAGEEASSLTSSWAFS*VPGQHW
Trigger: CCAGTGCTGACCTGGCACCCAAGAAAAAGCCCAGGA...CGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGGCCTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATGATTCTCTGGAGGAATaGATACTGCTGCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: GPRPCVPTPHCHSPRQCHDSLEE*ILLLDW
Trigger: CCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATC...ATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGTACCACTGGTTGGAATaGTGGGACTGGTTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLAPSMSSRRIPSSLPASYHWLE*WDWLGG
Trigger: CCCTCCCAACCAGTCCCATCATTCCAACCAGTGGTA...CGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCCATGGCTCATGTCATTaGCCACAGCTCCACCATCAT +
Preference number: 4 (lower is better)
Translates to: RWESSVPAGEEASSLTSSHGSCH*PQLHHH
Trigger: ATGATGGTGGAGCTGTGGTCAATGACATGAGCCATG...GCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACAGGTCAGATAGATTCTaGGGGAGGTGGAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: PVQVGVFSPCGRGGVFPDRSDRF*GRWKSG
Trigger: TCCTGATTTCCACCTCCCTCAGAATCTATCTGACCT...GTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCTGAACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR GCA 90 bp GTCAAGGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAATGCTGGTTGTCAAGTaGAGCCCCCGCCTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: VKDHVVLCHASPIPVQVGMLVVK*SPRLLV
Trigger: GACCAAGAGGCGGGGGCTGCACTTGACAACCAGCAT...TCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCCTTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCGGTGGCCATCATCACTaGTGGCACTACTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: EASSLTSSPMGCWAPYIFGGHHH*WHYWLR
Trigger: TCTGAGCCAGTAGTGCCAGCAGTGATGATGGCCACC...GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCGGGCTTTTTCTTGGGTaGCAGGTCAGCACTGGGCTC +
Preference number: 4 (lower is better)
Translates to: CSPLPCLSHTRSGGSLQSGLFLG*QVSTGL
Trigger: GAGCCCAGTGCTGACCTGGCACCCAAGAAAAAGCCC...GGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCCCCATGAGTCCTTCACAGACATaGCTGGGCTCATCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ESSVPAGEEASSLTSSPMSPSQT*LGSSPL
Trigger: AAGAGGAGATGAGCCCAGGCATGTCTGTGAAGGACT...CATGGGGCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGATGTAAAGCTCTCATaGAAGGCGGCCATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSAMPLPYPFRWESSVPADVKLS*KAAMLA
Trigger: TGCCAGCATGGCCGCCTTGCATGAGAGCTTTACATC...CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GGAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTTCGAGCCCCATGGGGTaGTGGGCACCATATATCTTC +
Preference number: 4 (lower is better)
Translates to: GGVFPDIEPHGVLGTIYLSSPMG*WAPYIF
Trigger: GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGA...AAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCTCGAGCCCCATGGGGTaGTGGGCACCATATATCTTC +
Preference number: 4 (lower is better)
Translates to: EASSLTSSPMGCWAPYIFSSPMG*WAPYIF
Trigger: GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGA...GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGACCATGTAGTCCTCTaGCATGCCTCTCCCATACCC +
Preference number: 4 (lower is better)
Translates to: SLAPSMSSRRIPSSLPASDHVVL*HASPIP
Trigger: GGGTATGGGAGAGGCATGGCAGAGGACTACATGGTC...CGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTGAATCCCCTCATCGCTaGCTGCGTCGGATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPCSPLPCLSHTRSGGSLESPHR*LRRILW
Trigger: CCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTC...AAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTGAATCCCCTCATCGCTaGCTGCGTCGGATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPRQCHREESPHRCLRRIESPHR*LRRILW
Trigger: CCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTC...AATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATGGCCTCGGCCTTGTGTaGCGACTCCCCACTGTCACT +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHGLGLV*RLPTVT
Trigger: AGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCC...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGGAGGGCTGCCTTCAGCCCCTAGGCTaGCAGGGAGGGCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PYIFTKNSSRRSLLREGCLQPLG*QGGQGP
Trigger: AGGCCCCTGCCCTCCCTGGCAGCCTAGGGGCTGAAG...GCAGCCCTCCCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGGCTGCGACGAGTCCAGGCCCATGTCATCGAGTTCTTTGGTCAACAGTTTACGTCCACTTGGGTGGGGTaGTACAGGTGCTGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: GLRRVQAHVIEFFGQQFTSTWVG*YRCCVL
Trigger: CAGCACGCAGCACCTGTACCACCCCACCCAAGTGGA...CGTAAACTGTTGACCAAAGAACTCGATGACATGGGCCTGGACTCGTCGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTTCTGAGTTGAAAGGCTaGGTTCCCGCAGCCTCAACC +
Preference number: 4 (lower is better)
Translates to: GGVFPDIEPHGVLGTIYLSELKG*VPAAST
Trigger: GGTTGAGGCTGCGGGAACCCAGCCTTTCAACTCAGA...AAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGTCTGAGTTGAAAGGCTaGGTTCCCGCAGCCTCAACC +
Preference number: 4 (lower is better)
Translates to: SLAPSMSSRRIPSSLPASSELKG*VPAAST
Trigger: GGTTGAGGCTGCGGGAACCCAGCCTTTCAACTCAGA...CGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGGCAGAATTCTGAATaGGAGAGACACAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SSAMPLPYPFRWESSVPAGQNSE*ERHRLA
Trigger: AGCCAGCCTGTGTCTCTCCCATTCAGAATTCTGCCC...CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCACTGGGCTCATGGGTaGCCATCATCACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HCHSPRQCHREESPHRCLHWAHG*PSSLLA
Trigger: TGCCAGCAGTGATGATGGCCACCCATGAGCCCAGTG...CAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGCCGATGAATCCGGAATaGGCTTTTTGGGTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: LGLVCRLPTVTRPVNVIEPMNPE*AFWVFS
Trigger: ACTGAACACCCAAAAAGCTCATTCCGGATTCATCGG...CTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTTTGATGACGTCCTGGTaGGAGGGCTCACTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GPCSPLPCLSHTRSGGSLLMTSW*EGSLWF
Trigger: GAACCACAGTGAGCCCTCTCACCAGGACGTCATCAA...AAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACAAAGTGGTCTCTTCATaGAAAATACCACCGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PVQVGVFSPCGRGGVFPDKVVSS*KIPPVH
Trigger: GTGCACCGGTGGTATTTTTCATGAAGAGACCACTTT...GTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCTGAACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR GCA 90 bp ACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATGTAGTCGGGTGGTACAGGTGCTaGGTGCTGAGCTTATCCAAG +
Preference number: 4 (lower is better)
Translates to: TAAGLEAGGGAQVKDHVVGWYRC*VLSLSK
Trigger: CTTGGATAAGCTCAGCACGCAGCACCTGTACCACCC...GACTACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATGTGGGGTGGTACAGGTaGTGCGTGCTGAGCTTATCC +
Preference number: 4 (lower is better)
Translates to: LVCRLPTVTRPVNVIEKNVGWYR*CVLSLS
Trigger: GGATAAGCTCAGCACGCAGCACCTGTACCACCCCAC...ATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGAGCCTCAACCCTGGTTaGTCTAACAGTAGCCCATTT +
Preference number: 4 (lower is better)
Translates to: LPCLSHTRSGGSLQSLRESLNPG*SNSSPF
Trigger: AAATGGGCTACTGTTAGAGCAACCAGGGTTGAGGCT...CTCCCGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATGCAAGGCGGCCATaGTGGCACCCCCACCATTGT +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWHARRP*WHPHHC
Trigger: ACAATGGTGGGGGTGCCAGCATGGCCGCCTTGCATG...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTGCCTGCGTCGGATTCTCTGGAGGAATGGATACTGCTGCTGGACTGGAGGCTGAGGGGAATGCAGCATTaGAACCAGCCACTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPASDSLEEWILLLDWRLRGMQH*NQPLCR
Trigger: TCTGCACAGTGGCTGGTTGCAATGCTGCATTCCCCT...CAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCTCGAGCCCCATGGGGTaGTGGGCACCATATATCTTC +
Preference number: 4 (lower is better)
Translates to: CSPLPCLSHTRSGGSLQSSSPMG*WAPYIF
Trigger: GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGA...GGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATGTAGTCTCGAGCCCCATGGGGTaGTGGGCACCATATATCTTC +
Preference number: 4 (lower is better)
Translates to: TAAGLEAGGGAQVKDHVVSSPMG*WAPYIF
Trigger: GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGA...GACTACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATGGAGTCTTCAGTCCCTaGGGGAGAGGAGGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHGVFSP*GRGGVF
Trigger: GAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCC...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCACCAAAGGAGTCTTCAGTCCCTaGGGGAGAGGAGGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: SSLTSSPMGCWAPYIFTKGVFSP*GRGGVF
Trigger: GAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCC...TTTGGTGAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGTAGTCCTCTGCCATaGCTCTCCCATACCCGTTCA +
Preference number: 4 (lower is better)
Translates to: VVLCHASPIPVQVGVFSPCSPLP*LSHTRS
Trigger: TGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA...GGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTTGGAGGAATGGATACTaGTGCTGGACTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: APSMSSRRIPSSLPASDSWRNGY*CWTGGW
Trigger: CCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCA...AGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCCCCTCATCGCTGCCTaGGTCGGATTCTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWPLIAA*VGFSGG
Trigger: TCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGG...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGAGAATCCCCTCATCGCTaGCTGCGTCGGATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RNGYCCWTGGWRWCSSQGESPHR*LRRILW
Trigger: CCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTC...TCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCGGCCTCGGCCTTGTGTaGCGACTCCCCACTGTCACT +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESGLGLV*RLPTVT
Trigger: AGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCC...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCCCCATGAAAACTGGGGCTAGTTaGACACTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ESSVPAGEEASSLTSSPMKTGAS*TLCVCV
Trigger: CACACACACACACAGTGTGCAACTAGCCCCAGTTTT...CATGGGGCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCTGTCCCCATGAACCCTaGTTCAGCCGTAGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: EASSLTSSPMGCWAPYIFCPHEP*FSRSRS
Trigger: AGAACGACTACGGCTGAACCAGGGTTCATGGGGACA...GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGTCCACTTGGGTGGGGTaGTACAGGTGCTGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWSTWVG*YRCCVL
Trigger: CAGCACGCAGCACCTGTACCACCCCACCCAAGTGGA...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACAGCAGCCCCCGCCTCTTaGTCTCCTCTTAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTAAPAS*SPLSGR
Trigger: GCGGCCGCTAAGAGGAGACCAAGAGGCGGGGGCTGC...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380667.6
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ATTTTGTGGCAAATGTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGGCAGCCCCCGCCTCTTaGTCTCCTCTTAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: ILWQMLHMIPPLLPDKLLAAPAS*SPLSGR
Trigger: GCGGCCGCTAAGAGGAGACCAAGAGGCGGGGGCTGC...CAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACATTTGCCACAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCAATGATGGGACTGGTTaGGAGGGAGGTTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: VVLCHASPIPVQVGVFSPNDGTG*EGGWRT
Trigger: AGTCCTCCAACCTCCCTCCCAACCAGTCCCATCATT...GGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCACTGCTGGCACTACTaGCTCAGAGGGTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRHCWHY*LRGWRG
Trigger: CCCCCGCCACCCTCTGAGCCAGTAGTGCCAGCAGTG...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGAAGGATGAGGATGATGAAACTACACAAGGAAGGACGGGTATGTGGGCAACAGCACTGCTGGCACTACTaGCTCAGAGGGTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GRMRMMKLHKEGRVCGQQHCWHY*LRGWRG
Trigger: CCCCCGCCACCCTCTGAGCCAGTAGTGCCAGCAGTG...CTGTTGCCCACATACCCGTCCTTCCTTGTGTAGTTTCATCATCCTCATCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp GCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTTCAGCACTGGGCTCATaGGTGGCCATCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: APSMSSRRIPSSLPASDSSALGS*VAIITA
Trigger: AGCAGTGATGATGGCCACCCATGAGCCCAGTGCTGA...AGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTCTCAGCACTGGGCTCATaGGTGGCCATCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: PRQCHREESPHRCLRRILSALGS*VAIITA
Trigger: AGCAGTGATGATGGCCACCCATGAGCCCAGTGCTGA...GAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGGTGCCAGGTCAGCACTaGGCTCATGGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWVPGQH*AHGWPS
Trigger: TGATGGCCACCCATGAGCCCAGTGCTGACCTGGCAC...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTGCTCATCCCCTTCCATaGATTCCTCGCCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: GPCSPLPCLSHTRSGGSLAHPLP*IPRPVW
Trigger: CCAAACTGGGCGAGGAATCCATGGAAGGGGATGAGC...AAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GAGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACTGGAGGCTGGAGGTaGTGCTCAAGTCAAGGACCA +
Preference number: 4 (lower is better)
Translates to: EEWILLLDWRLEVVLKSRTGGWR*CSSQGP
Trigger: TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGT...CCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATATACTGCTGCTGGACTaGAGGCTGGAGGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LVCRLPTVTRPVNVIEKNILLLD*RLEVVL
Trigger: GAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTAT...ATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCTTGCCAGCAGCATCCTaGAGGATGTATCCTCGGACA +
Preference number: 4 (lower is better)
Translates to: CSPLPCLSHTRSGGSLQSLPAAS*RMYPRT
Trigger: TGTCCGAGGATACATCCTTCAGGATGCTGCTGGCAA...GGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GGAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCTTAGCATAGGCATGTaGAGGCGAGGATTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: GGVFPDIEPHGVLGTIYLLSIGM*RRGLGF
Trigger: AAACCCCAATCCTCGCCTTCACATGCCTATGCTAAG...AAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCAGGAGGCGTCTTCCCTaGCATCGAGCCCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: VAHDPTIAPRQAAEHKRSRRRLP*HRAPWG
Trigger: ACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCCT...GGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGTTAGTATCAGCGTTTTaGCATGTCCCCATGAACCCT +
Preference number: 4 (lower is better)
Translates to: LGLVCRLPTVTRPVNVIELVSAF*HVPMNP
Trigger: AGGGTTCATGGGGACATGGCAAAACGCTGATACTAA...CTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGGTCCAGCCAAGGCCGTaGAGTATGTGCAGTACCTCC +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWVQPRP*SMCSTS
Trigger: GGAGGTACTGCACATACTGCACGGCCTTGGCTGGAC...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGGGGCTTTTTCTTGGGTaGCAGGTCAGCACTGGGCTC +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWGLFLG*QVSTGL
Trigger: GAGCCCAGTGCTGACCTGGCACCCAAGAAAAAGCCC...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATGGGCTTTTTCTTGGGTaGCAGGTCAGCACTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHGLFLG*QVSTGL
Trigger: GAGCCCAGTGCTGACCTGGCACCCAAGAAAAAGCCC...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGAGTCCTTCACAGACATaGCTGGGCTCATCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SLAPSMSSRRIPSSLPASSPSQT*LGSSPL
Trigger: AAGAGGAGATGAGCCCAGGCATGTCTGTGAAGGACT...CGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GGAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTTGCAACCAGCCACTGTaGAGACGTGCATCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GGVFPDIEPHGVLGTIYLCNQPL*RRASLS
Trigger: TGAAAGAGATGCACGTCTGCACAGTGGCTGGTTGCA...AAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTAGGGGAATGCAGCATTaGAACCAGCCACTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GPCSPLPCLSHTRSGGSLRGMQH*NQPLCR
Trigger: TCTGCACAGTGGCTGGTTGCAATGCTGCATTCCCCT...AAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCGGAGTCTTCAGTCCCTaGGGGAGAGGAGGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESGVFSP*GRGGVF
Trigger: GAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCC...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATGTAGTCTGTAGTCCTCTGCCATaGCTCTCCCATACCCGTTCA +
Preference number: 4 (lower is better)
Translates to: TAAGLEAGGGAQVKDHVVCSPLP*LSHTRS
Trigger: TGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA...GACTACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TACATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCCTTCAGCCCCTAGGCTaGCAGGGAGGGCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: YINAHTHTHTHTPQVHKRLQPLG*QGGQGP
Trigger: AGGCCCCTGCCCTCCCTGGCAGCCTAGGGGCTGAAG...GCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACACTTCAGCCCCTAGGCTaGCAGGGAGGGCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTLQPLG*QGGQGP
Trigger: AGGCCCCTGCCCTCCCTGGCAGCCTAGGGGCTGAAG...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGTCAGGGTCCCCTTGTTaGTGTACATTTTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LCHASPIPVQVGVFSPCGSGSPC*CTFCGK
Trigger: TTTGCCACAAAATGTACAGCAACAAGGGGACCCTGA...CCCGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGTGCAACCTGGGACTTTaGACTTGTGCATTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LGLVCRLPTVTRPVNVIECNLGL*TCAFLS
Trigger: TGAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCA...CTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAAAACTGGGGCTAGTTaGACACTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FRWESSVPAGEEASSLTSKTGAS*TLCVCV
Trigger: CACACACACACACAGTGTGCAACTAGCCCCAGTTTT...CGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTGCCTGCGTCGGATTCTCTGGAGGAATGGATACTGCTGCTGGACTGGAGGCTGTTTCCTCTTCGGAGATaGAGGCTGTCTCGATGTCCT +
Preference number: 4 (lower is better)
Translates to: LPASDSLEEWILLLDWRLFPLRR*RLSRCP
Trigger: AGGACATCGAGACAGCCTGCATCTCCGAAGAGGAAA...CAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411752.5
CDS-3UTR CCA 90 bp TCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGCAACGGATGGCCTGTTaGGACATTCTGAATAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSAMPLPYPFRWESSVPAQRMAC*DILNKR
Trigger: CCTCTTATTCAGAATGTCCCAACAGGCCATCCGTTG...CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGCTGCCATCCACTTGGGTGGGGTaGTACAGGTGCTGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: PDKLLNIRDPETSAPRLPSTWVG*YRCCVL
Trigger: CAGCACGCAGCACCTGTACCACCCCACCCAAGTGGA...TGGCAGCCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCAATCTCCACTTGGGTaGGGTGGTACAGGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWQSPLG*GGTGAA
Trigger: CGCAGCACCTGTACCACCCCACCCAAGTGGAGATTG...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTCTGGAGGACAATCTCCACTTGGGTaGGGTGGTACAGGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: NVIEKNPLIAACVGFSGGQSPLG*GGTGAA
Trigger: CGCAGCACCTGTACCACCCCACCCAAGTGGAGATTG...TCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTAGTGAGCAAGGAGGCTaGGACTCCTGGTGCGATTAT +
Preference number: 4 (lower is better)
Translates to: GPCSPLPCLSHTRSGGSLSEQGG*DSWCDY
Trigger: ATAATCGCACCAGGAGTCCCAGCCTCCTTGCTCACT...AAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATCTGAGTTGAAAGGCTaGGTTCCCGCAGCCTCAACC +
Preference number: 4 (lower is better)
Translates to: NGYCCWTGGWRWCSSQGPSELKG*VPAAST
Trigger: GGTTGAGGCTGCGGGAACCCAGCCTTTCAACTCAGA...TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCACTGGGCTCATGGGTaGCCATCATCACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWHWAHG*PSSLLA
Trigger: TGCCAGCAGTGATGATGGCCACCCATGAGCCCAGTG...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTCTGGAGGACACTGGGCTCATGGGTaGCCATCATCACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: NVIEKNPLIAACVGFSGGHWAHG*PSSLLA
Trigger: TGCCAGCAGTGATGATGGCCACCCATGAGCCCAGTG...TCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGCTGCCAGTGCCAGGTCAGCACTaGGCTCATGGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: PDKLLNIRDPETSAPRLPVPGQH*AHGWPS
Trigger: TGATGGCCACCCATGAGCCCAGTGCTGACCTGGCAC...TGGCAGCCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATGTAGTCCTTCACAGACATGCCTaGGCTCATCTCCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: TAAGLEAGGGAQVKDHVVLHRHA*AHLLLG
Trigger: TCCCAAGAGGAGATGAGCCCAGGCATGTCTGTGAAG...GACTACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTCCCGCTCAGGTTCTTaGTCTTCAGAAGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: VVLCHASPIPVQVGVFSPSRSGS*SSEVML
Trigger: CAGCATGACTTCTGAAGACCAAGAACCTGAGCGGGA...GGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATGCTCATCCCCTTCCATaGATTCCTCGCCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: LVCRLPTVTRPVNVIEKNAHPLP*IPRPVW
Trigger: CCAAACTGGGCGAGGAATCCATGGAAGGGGATGAGC...ATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGTGCTCAAGTCAAGGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTACTGGAGGCTGGAGGTaGTGCTCAAGTCAAGGACCA +
Preference number: 4 (lower is better)
Translates to: GAQVKDHVVLCHASPIPVTGGWR*CSSQGP
Trigger: TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGT...AACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCCTTGACTTGAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CATTGCCCCACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAATGCTGCGGCCTCCCAGCCAGTaGTGCAAGGTTAACAGATCA +
Preference number: 4 (lower is better)
Translates to: HCPTPRTLHSIRQPERMLRPPSQ*CKVNRS
Trigger: TGATCTGTTAACCTTGCACCACTGGCTGGGAGGCCG...CAGCATTCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTGGGGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471301.3
CDS-3UTR TCA 90 bp GGTGCTCAAGTCAAGGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTTTGCCAGCAGCATCCTaGAGGATGTATCCTCGGACA +
Preference number: 4 (lower is better)
Translates to: GAQVKDHVVLCHASPIPVLPAAS*RMYPRT
Trigger: TGTCCGAGGATACATCCTTCAGGATGCTGCTGGCAA...AACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCCTTGACTTGAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCCACAACATGGGACCTTaGAATATGCTGGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: VVLCHASPIPVQVGVFSPHNMGP*NMLASL
Trigger: AAGACTGGCCAGCATATTTCAAGGTCCCATGTTGTG...GGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR TCA 90 bp CTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGATCCTTCTCATCCGATaGATCCGGAATGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LPCLSHTRSGGSLQSLREILLIR*IRNELF
Trigger: AAAAAGCTCATTCCGGATTCATCGGATGAGAAGGAT...CTCCCGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GAGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGATTTTGTACTTGCTATaGCAGGGGTGGCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EEWILLLDWRLEVVLKSRILYLL*QGWQLL
Trigger: CAGGAGCTGCCACCCCTGTCATAGCAAGTACAAAAT...CCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GGGCCTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATTGTGAGTGCCAGATTTaGTTTTGTACTTGCTATGAC +
Preference number: 4 (lower is better)
Translates to: GPRPCVPTPHCHSPRQCHCECQI*FCTCYD
Trigger: GTCATAGCAAGTACAAAATCAAATCTGGCACTCACA...ATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGTACCACTGGTTGGAATaGTGGGACTGGTTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWYHWLE*WDWLGG
Trigger: CCCTCCCAACCAGTCCCATCATTCCAACCAGTGGTA...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGATCACTCACTTCGCTGTaGATGTGCTCATCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RNGYCCWTGGWRWCSSQGSLTSL*MCSSPS
Trigger: GGAAGGGGATGAGCACATTCACAGCGAAGTGAGTGA...TCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACAAGGAGGCGTCTTCCCTaGCATCGAGCCCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTRRRLP*HRAPWG
Trigger: ACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCCT...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGAGGAGGCGTCTTCCCTaGCATCGAGCCCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: CWAPYIFTKNSSRRSLLRRRRLP*HRAPWG
Trigger: ACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCCT...CCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CATTGCCCCACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAATGCTGTGCAGTTTACCAGTGTaGAACGGATGGCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: HCPTPRTLHSIRQPERMLCSLPV*NGWPVG
Trigger: CCCAACAGGCCATCCGTTGCACACTGGTAAACTGCA...CAGCATTCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTGGGGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468187.6
CDS-3UTR GCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGGGGTGGTACAGGTGCTaGGTGCTGAGCTTATCCAAG +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWGWYRC*VLSLSK
Trigger: CTTGGATAAGCTCAGCACGCAGCACCTGTACCACCC...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGCTGCCAAGCGGTCCAGCACCTTaGCAGCAGCATCCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PDKLLNIRDPETSAPRLPSGPAP*QQHPEG
Trigger: TCCTTCAGGATGCTGCTGGCAAGGTGCTGGACCGCT...TGGCAGCCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCCCCATGTTCTTTCTCCTGAATTaGCATCAGCTCCACAATGGA +
Preference number: 4 (lower is better)
Translates to: ESSVPAGEEASSLTSSPMFFLLN*HQLHNG
Trigger: TCCATTGTGGAGCTGATGGCAATTCAGGAGAAAGAA...CATGGGGCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGTTCTTTCTCCTGAATTaGCATCAGCTCCACAATGGA +
Preference number: 4 (lower is better)
Translates to: LCHASPIPVQVGVFSPCGFFLLN*HQLHNG
Trigger: TCCATTGTGGAGCTGATGGCAATTCAGGAGAAAGAA...CCCGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCAGCGAGGATTGGGGTTTaGACTGTGGCGATTACGACT +
Preference number: 4 (lower is better)
Translates to: NGYCCWTGGWRWCSSQGPARIGV*TVAITT
Trigger: AGTCGTAATCGCCACAGTGCAAACCCCAATCCTCGC...TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCTAGGGAGAGGATTTTaGAAGACAGGGTCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: HCHSPRQCHREESPHRCLLGRGF*KTGSRG
Trigger: CCCTCTAGACCCTGTCTTGCAAAATCCTCTCCCTAG...CAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATGTAGTCAGTCCTTCACAGACATaGCTGGGCTCATCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TAAGLEAGGGAQVKDHVVSPSQT*LGSSPL
Trigger: AAGAGGAGATGAGCCCAGGCATGTCTGTGAAGGACT...GACTACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CCATTTATGGTGAGCAACACTCCAGCTACAGGAAATATGCGACTCGTCTGGGACCATGCAAGGCGGCCATaGTGGCACCCCCACCATTGT +
Preference number: 4 (lower is better)
Translates to: PFMVSNTPATGNMRLVWDHARRP*WHPHHC
Trigger: ACAATGGTGGGGGTGCCAGCATGGCCGCCTTGCATG...GTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGTGTTGCTCACCATAAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp GCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTTGCAACCAGCCACTGTaGAGACGTGCATCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: APSMSSRRIPSSLPASDSCNQPL*RRASLS
Trigger: TGAAAGAGATGCACGTCTGCACAGTGGCTGGTTGCA...AGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATGGAGTCTTCAGTCCCTaGGGGAGAGGAGGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHGVFSP*GRGGVF
Trigger: GAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCC...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTCTGGAGGATGGAGGAATGGATACTaGTGCTGGACTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NVIEKNPLIAACVGFSGGWRNGY*CWTGGW
Trigger: CCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCA...TCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGCCCCTCATCGCTGCCTaGGTCGGATTCTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLPLIAA*VGFSGG
Trigger: TCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGG...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCCCCTCATCGCTGCCTaGGTCGGATTCTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVPLIAA*VGFSGG
Trigger: TCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGG...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCAGGCCTCGGCCTTGTGTaGCGACTCCCCACTGTCACT +
Preference number: 4 (lower is better)
Translates to: VVHSQGPLVAVHFVANVAGLGLV*RLPTVT
Trigger: AGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCC...TGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GGTGCTCAAGTCAAGGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTTCTGACATCTCGGCATaGTGGTTGTCAAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GAQVKDHVVLCHASPIPVSDISA*WLSSAA
Trigger: GGCTGCACTTGACAACCAGCATGCCGAGATGTCAGA...AACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCCTTGACTTGAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545497.5
CDS-3UTR CCA 90 bp CTTCCTCATTGCCCCACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGATGTCCCCATGAACCCTaGTTCAGCCGTAGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: LPHCPTPRTLHSIRQPERCPHEP*FSRSRS
Trigger: AGAACGACTACGGCTGAACCAGGGTTCATGGGGACA...TCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTGGGGCAATGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468187.6
CDS-3UTR CCA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTTCCACTTGGGTGGGGTaGTACAGGTGCTGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTSTWVG*YRCCVL
Trigger: CAGCACGCAGCACCTGTACCACCCCACCCAAGTGGA...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTGCACAATCTCCACTTaGGTGGGGTGGTACAGGTGC +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHCTIST*VGWYRC
Trigger: GCACCTGTACCACCCCACCCAAGTGGAGATTGTGCA...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGGCTGCGACGAGTCCAGGCCCATGTCATCGAGTTCTTTGGTCAACAGTTTACGGGAGGCTGGGACTCCTaGTGCGATTATTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: GLRRVQAHVIEFFGQQFTGGWDS*CDYCSQ
Trigger: TTGAGAGCAATAATCGCACCAGGAGTCCCAGCCTCC...CGTAAACTGTTGACCAAAGAACTCGATGACATGGGCCTGGACTCGTCGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCAAGTGAGCAAGGAGGCTaGGACTCCTGGTGCGATTAT +
Preference number: 4 (lower is better)
Translates to: NGYCCWTGGWRWCSSQGPSEQGG*DSWCDY
Trigger: ATAATCGCACCAGGAGTCCCAGCCTCCTTGCTCACT...TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGGCCATCTCGGCATGCTaGTTGTCAAGTGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLAISAC*LSSAAP
Trigger: GGGGGCTGCACTTGACAACCAGCATGCCGAGATGGC...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380667.6
ENST00000484726.5
CDS-3UTR CCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGAAGGCTATGTGGAGGTaGGGTGGGCCCAAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLKAMWR*GGPKVC
Trigger: GCACACCTTGGGCCCACCCCACCTCCACATAGCCTT...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000484726.5
CDS-3UTR CCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATGGGAGAGACACAGGCTaGCTCGGTTTTGGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHGRDTG*LGFGLH
Trigger: GTGGAGCCCAAAACCGAGCCAGCCTGTGTCTCTCCC...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATTGTGAAGGCGAGGATTaGGGTTTGCACTGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: LVCRLPTVTRPVNVIEKNCEGED*GLHCGD
Trigger: ATCGCCACAGTGCAAACCCCAATCCTCGCCTTCACA...ATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGTATGGTACCACTGGTTaGAATGATGGGACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SLAPSMSSRRIPSSLPASYGTTG*NDGTGW
Trigger: CCAACCAGTCCCATCATTCCAACCAGTGGTACCATA...CGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCCACTGGGCTCATGGGTaGCCATCATCACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESHWAHG*PSSLLA
Trigger: TGCCAGCAGTGATGATGGCCACCCATGAGCCCAGTG...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTCAGCACTGGGCTCATaGGTGGCCATCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHSALGS*VAIITA
Trigger: AGCAGTGATGATGGCCACCCATGAGCCCAGTGCTGA...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCGTGCCAGGTCAGCACTaGGCTCATGGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: PPLLPDKLLNIRDPETSAVPGQH*AHGWPS
Trigger: TGATGGCCACCCATGAGCCCAGTGCTGACCTGGCAC...GGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGGTGCCAGGTCAGCACTaGGCTCATGGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: LLPDKLLNIRDPETSAPRVPGQH*AHGWPS
Trigger: TGATGGCCACCCATGAGCCCAGTGCTGACCTGGCAC...CCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGTCCTGGGCTTTTTCTTaGGTGCCAGGTCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWSWAFS*VPGQHW
Trigger: CCAGTGCTGACCTGGCACCCAAGAAAAAGCCCAGGA...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGAATTCCTCGCCCAGTTTaGGCTCCGAAGACTCAGACT +
Preference number: 4 (lower is better)
Translates to: RNGYCCWTGGWRWCSSQGIPRPV*APKTQT
Trigger: AGTCTGAGTCTTCGGAGCCCAAACTGGGCGAGGAAT...TCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGGCTCATCCCCTTCCATaGATTCCTCGCCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWAHPLP*IPRPVW
Trigger: CCAAACTGGGCGAGGAATCCATGGAAGGGGATGAGC...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGGCAAGGCGGCCATGCTaGCACCCCCACCATTGTACA +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLARRPC*HPHHCT
Trigger: TGTACAATGGTGGGGGTGCCAGCATGGCCGCCTTGC...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCTGCAGGCAACAGTCATaGGTACAACAAATTGTCTCT +
Preference number: 4 (lower is better)
Translates to: RWESSVPAGEEASSLTSSCRQQS*VQQIVS
Trigger: AGAGACAATTTGTTGTACCCATGACTGTTGCCTGCA...GCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGGCGCTGCGGGAAGGTTaGAAGGAAGCATGGCATCCC +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRALREG*KEAWHP
Trigger: GGGATGCCATGCTTCCTTCCAACCTTCCCGCAGCGC...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp CATTGCCCCACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAATGCTGTTAACAGATCAGTCCTaGCCTTCGGGCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: HCPTPRTLHSIRQPERMLLTDQS*PSGRQQ
Trigger: CTGCTGTCTGCCCGAAGGCCAGGACTGATCTGTTAA...CAGCATTCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTGGGGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471301.3
3UTR CAA 72 bp GAGGCTCCCACTGAAACAGTGCCAGGTCAGTTCACCTaGCAGGGACTGGCGCTTTCTCCCTCTCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: EAPTETVPGQFT*QGLALSPSLLK
Trigger: TTTCAAAAGAGAGGGAGAAAGCGCCAGTCCCTGCAAGGTGAACTGACCTGGCACTGTTTCAGTGGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CAA 72 bp CCACAGCACCGATTCACAGATGGGGTAGAGGATGCTTaGTCTCCTAGCATGGAAAAGGCAGGCAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PQHRFTDGVEDA*SPSMEKAGSEA
Trigger: AGCCTCACTGCCTGCCTTTTCCATGCTAGGAGACAAAGCATCCTCTACCCCATCTGTGAATCGGTGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
3UTR CAA 72 bp CCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTaGCTAAGGGAGGGCTGCGACGAGTCCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: PYIFTKNSSRRS*LREGCDESRPM
Trigger: CATGGGCCTGGACTCGTCGCAGCCCTCCCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGGTCGGCCAGGGCTTGTaGGTGCCAGATTTGATTTTG +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWVGQGL*VPDLIL
Trigger: CAAAATCAAATCTGGCACTCACAAGCCCTGGCCGAC...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATTGGAGATTAGGGTTCTaGCTGTGCCGATTTCGGCTT +
Preference number: 4 (lower is better)
Translates to: LVCRLPTVTRPVNVIEKNWRLGF*LCRFRL
Trigger: AAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCA...ATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GGTGCTCAAGTCAAGGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTTGGAGATTAGGGTTCTaGCTGTGCCGATTTCGGCTT +
Preference number: 4 (lower is better)
Translates to: GAQVKDHVVLCHASPIPVWRLGF*LCRFRL
Trigger: AAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCA...AACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCCTTGACTTGAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCACTCTGTTTTCACCCTaGAATCAAAGATCCCACTCC +
Preference number: 4 (lower is better)
Translates to: VVLCHASPIPVQVGVFSPTLFSP*NQRSHS
Trigger: GGAGTGGGATCTTTGATTTCAGGGTGAAAACAGAGT...GGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CTTCCTCATTGCCCCACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAGCTGTGTTTCACCTCTaGGCAGAAGTCATTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LPHCPTPRTLHSIRQPERAVFHL*AEVIGD
Trigger: GTCTCCAATGACTTCTGCTCAGAGGTGAAACACAGC...TCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTGGGGCAATGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468187.6
ENST00000471301.3
CDS-3UTR GCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGTGCAGTTTACCAGTGTaGAACGGATGGCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWCSLPV*NGWPVG
Trigger: CCCAACAGGCCATCCGTTGCACACTGGTAAACTGCA...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCACCAAATGCAGTTTACCAGTGTaGAACGGATGGCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: SSLTSSPMGCWAPYIFTKCSLPV*NGWPVG
Trigger: CCCAACAGGCCATCCGTTGCACACTGGTAAACTGCA...TTTGGTGAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGGTGGGGTGGTACAGGTaGTGCGTGCTGAGCTTATCC +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLVGWYR*CVLSLS
Trigger: GGATAAGCTCAGCACGCAGCACCTGTACCACCCCAC...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTAGCCTCAACCCTGGTTaGTCTAACAGTAGCCCATTT +
Preference number: 4 (lower is better)
Translates to: APSMSSRRIPSSLPASDSSLNPG*SNSSPF
Trigger: AAATGGGCTACTGTTAGAGCAACCAGGGTTGAGGCT...AGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGGAGGGGGGCTTTTTCTTGGGTaGCAGGTCAGCACTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GTIYLHQKFIAEVLAKGGGLFLG*QVSTGL
Trigger: GAGCCCAGTGCTGACCTGGCACCCAAGAAAAAGCCC...CCCTCCCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GAGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGGGTCTTCAGAAGTCATaGTGTCGGCCCTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: EEWILLLDWRLEVVLKSRGLQKS*CRPSLF
Trigger: AAATAAGGAGGGCCGACAGCATGACTTCTGAAGACC...CCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTGGTCTTCAGAAGTCATaGTGTCGGCCCTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: APSMSSRRIPSSLPASDSGLQKS*CRPSLF
Trigger: AAATAAGGAGGGCCGACAGCATGACTTCTGAAGACC...AGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATGTAGTCGGTCTTCAGAAGTCATaGTGTCGGCCCTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: TAAGLEAGGGAQVKDHVVGLQKS*CRPSLF
Trigger: AAATAAGGAGGGCCGACAGCATGACTTCTGAAGACC...GACTACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGCATGCAAGGCGGCCATaGTGGCACCCCCACCATTGT +
Preference number: 4 (lower is better)
Translates to: CWAPYIFTKNSSRRSLLRHARRP*WHPHHC
Trigger: ACAATGGTGGGGGTGCCAGCATGGCCGCCTTGCATG...CCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGACTGGAGTCTTCAGTCCCTaGGGGAGAGGAGGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: KHVGHLVRAGICSVHSETGVFSP*GRGGVF
Trigger: GAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCC...AGTCTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGGGGTGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCGACCATGTAGTCCTCTaGCATGCCTCTCCCATACCC +
Preference number: 4 (lower is better)
Translates to: WGAGHHISSPKIHRGGPCDHVVL*HASPIP
Trigger: GGGTATGGGAGAGGCATGGCAGAGGACTACATGGTC...GCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCAGGAATGGATACTGCTaGTGGACTGGAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESRNGYC*WTGGWR
Trigger: CCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGAGGAATGGATACTaGTGCTGGACTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESWRNGY*CWTGGW
Trigger: CCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCA...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GGAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTTGCAACCTGGGACTTTaGACTTGTGCATTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: GGVFPDIEPHGVLGTIYLCNLGL*TCAFLS
Trigger: TGAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCA...AAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCCCCATGAGGAAAACATCATATTaGAACCTGGGACTTTGCACT +
Preference number: 4 (lower is better)
Translates to: ESSVPAGEEASSLTSSPMRKTSY*NLGLCT
Trigger: AGTGCAAAGTCCCAGGTTGCAATATGATGTTTTCCT...CATGGGGCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTCTCTGAGATGCGCTaGGGGAAGGTTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHFSEMR*GKVGRK
Trigger: CTTCCTTCCAACCTTCCCGCAGCGCATCTCAGAGAA...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp AGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCGGTGCACTCAGTATGTaGATTCTGCTCAGATATTTT +
Preference number: 4 (lower is better)
Translates to: RWESSVPAGEEASSLTSSGALSM*ILLRYF
Trigger: AAAATATCTGAGCAGAATGCACATACTGAGTGCACC...GCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR CCA 90 bp TCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCACCAAATGTCCCCATGAACCCTaGTTCAGCCGTAGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: SSLTSSPMGCWAPYIFTKCPHEP*FSRSRS
Trigger: AGAACGACTACGGCTGAACCAGGGTTCATGGGGACA...TTTGGTGAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GAGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGCAACGGATGGCCTGTTaGGACATTCTGAATAAGAGG +
Preference number: 4 (lower is better)
Translates to: EEWILLLDWRLEVVLKSRQRMAC*DILNKR
Trigger: CCTCTTATTCAGAATGTCCCAACAGGCCATCCGTTG...CCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTTCCACTTGGGTGGGGTaGTACAGGTGCTGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: THTPQVHKRTLTMAVQTRSTWVG*YRCCVL
Trigger: CAGCACGCAGCACCTGTACCACCCCACCCAAGTGGA...ACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCAATCTCCACTTGGGTaGGGTGGTACAGGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRQSPLG*GGTGAA
Trigger: CGCAGCACCTGTACCACCCCACCCAAGTGGAGATTG...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CTCGGCCTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGGTTTATGTACTGGAATaGAAGCAGAAATGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LGLVCRLPTVTRPVNVIEVYVLE*KQKCKA
Trigger: AGCCTTGCATTTCTGCTTCCATTCCAGTACATAAAC...CTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAGGCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGACAGGGTTTATGTACTaGAATGGAAGCAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: LPCLSHTRSGGSLQSLRETGFMY*NGSRNA
Trigger: TGCATTTCTGCTTCCATTCCAGTACATAAACCCTGT...CTCCCGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGGTAATTAAGGCTATGTaGAGGTGGGGTGGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWVIKAM*RWGGPK
Trigger: CTTGGGCCCACCCCACCTCCACATAGCCTTAATTAC...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000484726.5
CDS-3UTR CCA 90 bp CTGCCTGCGTCGGATTCTCTGGAGGAATGGATACTGCTGCTGGACTGGAGGCTGATCAACCCCACAACATaGGACCTTGAAATATGCTGG +
Preference number: 4 (lower is better)
Translates to: LPASDSLEEWILLLDWRLINPTT*DLEICW
Trigger: CCAGCATATTTCAAGGTCCCATGTTGTGGGGTTGAT...CAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR CCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGGGGTTTGCACTGTaGCGATTACGACTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHLGFAL*RLRLRR
Trigger: CCTCCGAAGTCGTAATCGCCACAGTGCAAACCCCAA...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTGTGAAGGCGAGGATTaGGGTTTGCACTGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHCEGED*GLHCGD
Trigger: ATCGCCACAGTGCAAACCCCAATCCTCGCCTTCACA...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCAGTGGTAAAACCCATTaGGGGTCGGCCAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESSGKTH*GSARAC
Trigger: ACAAGCCCTGGCCGACCCCCAATGGGTTTTACCACT...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TGGGGTGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCAGTGGTAAAACCCATTaGGGGTCGGCCAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: WGAGHHISSPKIHRGGPCSGKTH*GSARAC
Trigger: ACAAGCCCTGGCCGACCCCCAATGGGTTTTACCACT...GCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGAATGATGGGACTGGTTaGGAGGGAGGTTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWNDGTG*EGGWRT
Trigger: AGTCCTCCAACCTCCCTCCCAACCAGTCCCATCATT...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCACTGGGCTCATGGGTaGCCATCATCACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PPLLPDKLLNIRDPETSAHWAHG*PSSLLA
Trigger: TGCCAGCAGTGATGATGGCCACCCATGAGCCCAGTG...GGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGGTGCCAGGTCAGCACTaGGCTCATGGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSEVPGQH*AHGWPS
Trigger: TGATGGCCACCCATGAGCCCAGTGCTGACCTGGCAC...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCACCAAAAATCCTGGGCTTTTTCTTaGGTGCCAGGTCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: FPDIEPHGVLGTIYLHQKSWAFS*VPGQHW
Trigger: CCAGTGCTGACCTGGCACCCAAGAAAAAGCCCAGGA...TTTTTGGTGAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATCTTCACAGACATGCCTaGGCTCATCTCCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHLHRHA*AHLLLG
Trigger: TCCCAAGAGGAGATGAGCCCAGGCATGTCTGTGAAG...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCGCTCATCCCCTTCCATaGATTCCTCGCCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESAHPLP*IPRPVW
Trigger: CCAAACTGGGCGAGGAATCCATGGAAGGGGATGAGC...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATCCATACCCGTTCAGGTaGGAGTCTTCAGTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHPYPFR*ESSVPA
Trigger: CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGG...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGCTGGACTGGAGGCTaGAGGTGGTGCTCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESCWTGG*RWCSSQ
Trigger: TTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCA...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGATACTGCTGCTGGACTaGAGGCTGGAGGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRILLLD*RLEVVL
Trigger: GAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTAT...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TGGGGTGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCAATGGATACTGCTGCTaGACTGGAGGCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WGAGHHISSPKIHRGGPCNGYCC*TGGWRW
Trigger: CCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT...GCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCTGCGTCGGATTCTCTaGAGGAATGGATACTGCTGC +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWLRRIL*RNGYCC
Trigger: GCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAG...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTCAGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGCATCATATTGCAACCTaGGACTTTGCACTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: FRWESSVPAGEEASSLTSHHIAT*DFALVH
Trigger: ATGCACAAGTGCAAAGTCCCAGGTTGCAATATGATG...CGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCAGCCTTGCTGACCCCTaGCATCTTTCGGTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESSLADP*HLSVLR
Trigger: CCTGAGAACCGAAAGATGCCAGGGGTCAGCAAGGCT...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp TCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTGCTGTCTCGATGTCCTaGACCTATGGTTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SPRQCHREESPHRCLRRIAVSMS*TYGSFH
Trigger: ATGGAAAGAACCATAGGTCCAGGACATCGAGACAGC...AATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGGATGTAGGTTTATGTTaGCAGGAGATGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: HCHSPRQCHREESPHRCLDVGLC*QEMQAV
Trigger: GACAGCCTGCATCTCCTGCCAACATAAACCTACATC...CAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418777.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATACAGGTGCTGCGTGCTaGGCTTATCCAAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHTGAAC*AYPRHV
Trigger: CACATGCCTTGGATAAGCTCAGCACGCAGCACCTGT...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTTGCCAGCAGCATCCTaGAGGATGTATCCTCGGACA +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESLPAAS*RMYPRT
Trigger: TGTCCGAGGATACATCCTTCAGGATGCTGCTGGCAA...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATAACCGCAGAAACTGCTaGAGGGTGATGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVCRLPTVTRPVNVIEKNNRRNC*RVMISS
Trigger: AGAGGAAATCATCACCCTTCAGCAGTTTCTGCGGTT...ATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGTCATTATATTCATTCTaGGTTGAAAGGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SSAMPLPYPFRWESSVPASLYSF*VERLGS
Trigger: GGAACCCAGCCTTTCAACTCAGAATGAATATAATGA...CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCGATGAATCCGGAATaGGCTTTTTGGGTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: RNGYCCWTGGWRWCSSQGPMNPE*AFWVFS
Trigger: ACTGAACACCCAAAAAGCTCATTCCGGATTCATCGG...TCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCACCGATGAATCCGGAATaGGCTTTTTGGGTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: NGYCCWTGGWRWCSSQGPPMNPE*AFWVFS
Trigger: ACTGAACACCCAAAAAGCTCATTCCGGATTCATCGG...TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGATTTTGTACTTGCTATaGCAGGGGTGGCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWILYLL*QGWQLL
Trigger: CAGGAGCTGCCACCCCTGTCATAGCAAGTACAAAAT...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATCATGGCTCATGTCATTaGCCACAGCTCCACCATCAT +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHHGSCH*PQLHHH
Trigger: ATGATGGTGGAGCTGTGGTCAATGACATGAGCCATG...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCACCTTATTTCAGTCCTTaGAATGCACCGGGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: NGYCCWTGGWRWCSSQGPPYFSP*NAPGPV
Trigger: AACAGGACCCGGTGCATTTCAAGGACTGAAATAAGG...TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTTGATGACGTCCTGGTaGGAGGGCTCACTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHLMTSW*EGSLWF
Trigger: GAACCACAGTGAGCCCTCTCACCAGGACGTCATCAA...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTTGATGACGTCCTGGTaGGAGGGCTCACTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: VAHDPTIAPRQAAEHKRSLMTSW*EGSLWF
Trigger: GAACCACAGTGAGCCCTCTCACCAGGACGTCATCAA...GGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCACTAATCTACTGAAGTaGAGGGAATGTTTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RWESSVPAGEEASSLTSSTNLLK*RECFCG
Trigger: TCCACAAAAACATTCCCTTCACTTCAGTAGATTAGT...GCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCACTCTGTTTTCACCCTaGAATCAAAGATCCCACTCC +
Preference number: 4 (lower is better)
Translates to: CSPLPCLSHTRSGGSLQSTLFSP*NQRSHS
Trigger: GGAGTGGGATCTTTGATTTCAGGGTGAAAACAGAGT...GGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGATATCCAGGGCCAGATaGATGGAGCTCTCTCACACA +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWISRAR*MELSHT
Trigger: TGTGTGAGAGAGCTCCATTCATCTGGCCCTGGATAT...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp TTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCACCAAAAATGCAGTTTACCAGTGTaGAACGGATGGCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: FPDIEPHGVLGTIYLHQKCSLPV*NGWPVG
Trigger: CCCAACAGGCCATCCGTTGCACACTGGTAAACTGCA...TTTTTGGTGAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCGGGTGGTACAGGTGCTaGGTGCTGAGCTTATCCAAG +
Preference number: 4 (lower is better)
Translates to: VAHDPTIAPRQAAEHKRSGWYRC*VLSLSK
Trigger: CTTGGATAAGCTCAGCACGCAGCACCTGTACCACCC...GGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTGTGGGGTGGTACAGGTaGTGCGTGCTGAGCTTATCC +
Preference number: 4 (lower is better)
Translates to: THTPQVHKRTLTMAVQTRVGWYR*CVLSLS
Trigger: GGATAAGCTCAGCACGCAGCACCTGTACCACCCCAC...ACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGGTGGGGTGGTACAGGTaGTGCGTGCTGAGCTTATCC +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSEVGWYR*CVLSLS
Trigger: GGATAAGCTCAGCACGCAGCACCTGTACCACCCCAC...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ATTTTGTGGCAAATGTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGGTCCAGCCAAGGCCGTaGAGTATGTGCAGTACCTCC +
Preference number: 4 (lower is better)
Translates to: ILWQMLHMIPPLLPDKLLVQPRP*SMCSTS
Trigger: GGAGGTACTGCACATACTGCACGGCCTTGGCTGGAC...CAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACATTTGCCACAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGAGCGGTCCAGCACCTTaGCAGCAGCATCCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSESGPAP*QQHPEG
Trigger: TCCTTCAGGATGCTGCTGGCAAGGTGCTGGACCGCT...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATCTAGGGAGAGGATTTTaGAAGACAGGGTCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHLGRGF*KTGSRG
Trigger: CCCTCTAGACCCTGTCTTGCAAAATCCTCTCCCTAG...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCGGTGGCCATCATCACTaGTGGCACTACTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVGGHHH*WHYWLR
Trigger: TCTGAGCCAGTAGTGCCAGCAGTGATGATGGCCACC...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GTCAAGGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGACACCGGGTCCTGTTATaGTTAGAAAAGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: VKDHVVLCHASPIPVQVGHRVLL*LEKSFT
Trigger: TGTGAAGGACTTTTCTAAGCATAACAGGACCCGGTG...TCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGTTTCAGTCCTTGAAATaGACCGGGTCCTGTTATGCT +
Preference number: 4 (lower is better)
Translates to: HCHSPRQCHREESPHRCLFQSLK*TGSCYA
Trigger: AGCATAACAGGACCCGGTGCATTTCAAGGACTGAAA...CAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTGCAACCAGCCACTGTaGAGACGTGCATCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHCNQPL*RRASLS
Trigger: TGAAAGAGATGCACGTCTGCACAGTGGCTGGTTGCA...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCAGGGGAATGCAGCATTaGAACCAGCCACTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESRGMQH*NQPLCR
Trigger: TCTGCACAGTGGCTGGTTGCAATGCTGCATTCCCCT...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTCGAGCCCCATGGGGTaGTGGGCACCATATATCTTC +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLSSPMG*WAPYIF
Trigger: GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGA...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TACATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCGGAGTCTTCAGTCCCTaGGGGAGAGGAGGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: YINAHTHTHTHTPQVHKRGVFSP*GRGGVF
Trigger: GAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCC...GCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGCTGCCATGTAGTCCTCTGCCATaGCTCTCCCATACCCGTTCA +
Preference number: 4 (lower is better)
Translates to: PDKLLNIRDPETSAPRLPCSPLP*LSHTRS
Trigger: TGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA...TGGCAGCCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATGACCATGTAGTCCTCTaGCATGCCTCTCCCATACCC +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHDHVVL*HASPIP
Trigger: GGGTATGGGAGAGGCATGGCAGAGGACTACATGGTC...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGGAGGGCTGCGACCATGTAGTCCTCTaGCATGCCTCTCCCATACCC +
Preference number: 4 (lower is better)
Translates to: PYIFTKNSSRRSLLREGCDHVVL*HASPIP
Trigger: GGGTATGGGAGAGGCATGGCAGAGGACTACATGGTC...GCAGCCCTCCCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCAGGAATGGATACTGCTaGTGGACTGGAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVRNGYC*WTGGWR
Trigger: CCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCAGGAATGGATACTGCTaGTGGACTGGAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VAHDPTIAPRQAAEHKRSRNGYC*WTGGWR
Trigger: CCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT...GGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGGAGGGCTGCAGGAATGGATACTGCTaGTGGACTGGAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PYIFTKNSSRRSLLREGCRNGYC*WTGGWR
Trigger: CCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT...GCAGCCCTCCCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTGGAGGAATGGATACTaGTGCTGGACTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLWRNGY*CWTGGW
Trigger: CCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCA...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGGAGGGCTGCTGGAGGAATGGATACTaGTGCTGGACTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PYIFTKNSSRRSLLREGCWRNGY*CWTGGW
Trigger: CCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCA...GCAGCCCTCCCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TACATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCCCCCTCATCGCTGCCTaGGTCGGATTCTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: YINAHTHTHTHTPQVHKRPLIAA*VGFSGG
Trigger: TCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGG...GCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GTGGAGATTAGGGTTCTGACTGTGCCGATTTCGGCTTCGTACAGAGGAAAACATGAATCCCCTCATCGCTaGCTGCGTCGGATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VEIRVLTVPISASYRGKHESPHR*LRRILW
Trigger: CCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTC...ATGTTTTCCTCTGTACGAAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATAAAACTGGGGCTAGTTaGACACTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LVCRLPTVTRPVNVIEKNKTGAS*TLCVCV
Trigger: CACACACACACACAGTGTGCAACTAGCCCCAGTTTT...ATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAATGCTGTGTTTCACGGCAGCCGGAAAGAATaGTGTGTTTCACCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HTQDTAQYKAAGKNAVFHGSRKE*CVSPLS
Trigger: GCTCAGAGGTGAAACACAGCATTCTTTCCGGCTGCC...GTGAAACACAGCATTCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468187.6
ENST00000471301.3
CDS-3UTR GCA 90 bp CACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAATGCTGTGTTTCACAAGTCACTTCCTCATTaGCCCACACCCAGGACACTG +
Preference number: 4 (lower is better)
Translates to: HTQDTAQYKAAGKNAVFHKSLPH*PTPRTL
Trigger: CAGTGTCCTGGGTGTGGGGCAATGAGGAAGTGACTT...GTGAAACACAGCATTCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468187.6
ENST00000471301.3
CDS-3UTR GCA 90 bp CACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAATGCTGTGTTTCACCCTCCCAGCCAGTGGTaGAAGGTTAACAGATCAGTC +
Preference number: 4 (lower is better)
Translates to: HTQDTAQYKAAGKNAVFHPPSQW*KVNRSV
Trigger: GACTGATCTGTTAACCTTGCACCACTGGCTGGGAGG...GTGAAACACAGCATTCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471301.3
CDS-3UTR GCA 90 bp ACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATGTAGTCGACCGTTTTGCTCATTaGTCTTCTCCCAGTATCTGT +
Preference number: 4 (lower is better)
Translates to: TAAGLEAGGGAQVKDHVVDRFAH*SSPSIC
Trigger: ACAGATACTGGGAGAAGAGCAATGAGCAAAACGGTC...GACTACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR GCA 90 bp GTCAAGGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGATTGTGGTCTATTTGGTaGACAGTTCTGAAGACGGTG +
Preference number: 4 (lower is better)
Translates to: VKDHVVLCHASPIPVQVGLWSIW*TVLKTV
Trigger: CACCGTCTTCAGAACTGTGCACCAAATAGACCACAA...TCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCCTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR CCA 90 bp AATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATGGTTCCGAACTGCATaGAGTTGTCAGTACAGGAGT +
Preference number: 4 (lower is better)
Translates to: NGYCCWTGGWRWCSSQGPWFRTA*SCQYRS
Trigger: ACTCCTGTACTGACAACTCCATGCAGTTCGGAACCA...TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGTTGAAAGGCTaGGTTCCCGCAGCCTCAACC +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHSELKG*VPAAST
Trigger: GGTTGAGGCTGCGGGAACCCAGCCTTTCAACTCAGA...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTTCTGAGTTGAAAGGCTaGGTTCCCGCAGCCTCAACC +
Preference number: 4 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTSELKG*VPAAST
Trigger: GGTTGAGGCTGCGGGAACCCAGCCTTTCAACTCAGA...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGTATGTGGAGGTGGGGTaGGCCCAAGGTGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSEYVEVG*AQGVPS
Trigger: AGATGGCACACCTTGGGCCCACCCCACCTCCACATA...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000484726.5
CDS-3UTR CCA 90 bp GTCAAGGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGACCTTGAAATATGCTaGCCAGTCTTGCTCACTAAG +
Preference number: 4 (lower is better)
Translates to: VKDHVVLCHASPIPVQVGDLEIC*PVLLTK
Trigger: CTTAGTGAGCAAGACTGGCCAGCATATTTCAAGGTC...TCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCCTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR CCA 90 bp GAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCCATTCTTATAAGGTGTaGGAGAAACTTCGGATTCGC +
Preference number: 4 (lower is better)
Translates to: EASSLTSSPMGCWAPYIFHSYKV*EKLRIR
Trigger: GCGAATCCGAAGTTTCTCCCACACCTTATAAGAATG...GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGCTGCCATGTGAAGGCGAGGATTaGGGTTTGCACTGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: PDKLLNIRDPETSAPRLPCEGED*GLHCGD
Trigger: ATCGCCACAGTGCAAACCCCAATCCTCGCCTTCACA...TGGCAGCCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTTGGCAGCTCCTGAGGTaGCCCGAATTAAATCTTTAT +
Preference number: 4 (lower is better)
Translates to: GPCSPLPCLSHTRSGGSLWQLLR*PELNLY
Trigger: ATAAAGATTTAATTCGGGCCACCTCAGGAGCTGCCA...AAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CCATTTATGGTGAGCAACACTCCAGCTACAGGAAATATGCGACTCGTCTGGGACTCAGCACTGGGCTCATaGGTGGCCATCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: PFMVSNTPATGNMRLVWDSALGS*VAIITA
Trigger: AGCAGTGATGATGGCCACCCATGAGCCCAGTGCTGA...GTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGTGTTGCTCACCATAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGTCCTGGGCTTTTTCTTaGGTGCCAGGTCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRSWAFS*VPGQHW
Trigger: CCAGTGCTGACCTGGCACCCAAGAAAAAGCCCAGGA...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCTCCTGGGCTTTTTCTTaGGTGCCAGGTCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: PPLLPDKLLNIRDPETSASWAFS*VPGQHW
Trigger: CCAGTGCTGACCTGGCACCCAAGAAAAAGCCCAGGA...GGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCGCTCATCCCCTTCCATaGATTCCTCGCCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVAHPLP*IPRPVW
Trigger: CCAAACTGGGCGAGGAATCCATGGAAGGGGATGAGC...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCGCAAGGCGGCCATGCTaGCACCCCCACCATTGTACA +
Preference number: 4 (lower is better)
Translates to: TLRVPLLLYILWQMLHMIARRPC*HPHHCT
Trigger: TGTACAATGGTGGGGGTGCCAGCATGGCCGCCTTGC...GATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACAGCAAGGCGGCCATGCTaGCACCCCCACCATTGTACA +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTARRPC*HPHHCT
Trigger: TGTACAATGGTGGGGGTGCCAGCATGGCCGCCTTGC...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AGGTGGGAGTCTTCAGTCCCTGCGGGAGAGGAGGCGTCTTCCCTGACATCGAGCTGTCATCGAGTTCTTTaGTCAACAGTTTACGATGTA +
Preference number: 4 (lower is better)
Translates to: RWESSVPAGEEASSLTSSCHRVL*STVYDV
Trigger: TACATCGTAAACTGTTGACCAAAGAACTCGATGACA...GCTCGATGTCAGGGAAGACGCCTCCTCTCCCGCAGGGACTGAAGACTCCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGAGCCCCATGGGGTGCTaGGCACCATATATCTTCACC +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRSPMGC*APYIFT
Trigger: GGTGAAGATATATGGTGCCCAGCACCCCATGGGGCT...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCAGCCCCATGGGGTGCTaGGCACCATATATCTTCACC +
Preference number: 4 (lower is better)
Translates to: PPLLPDKLLNIRDPETSASPMGC*APYIFT
Trigger: GGTGAAGATATATGGTGCCCAGCACCCCATGGGGCT...GGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACCATACCCGTTCAGGTaGGAGTCTTCAGTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: VVHSQGPLVAVHFVANVAPYPFR*ESSVPA
Trigger: CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGG...TGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGACTGGAGGCTGGAGGTaGTGCTCAAGTCAAGGACCA +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRTGGWR*CSSQGP
Trigger: TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGT...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCACTGGAGGCTGGAGGTaGTGCTCAAGTCAAGGACCA +
Preference number: 4 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVTGGWR*CSSQGP
Trigger: TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGT...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACAATACTGCTGCTGGACTaGAGGCTGGAGGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTILLLD*RLEVVL
Trigger: GAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTAT...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGATACTGCTGCTGGACTaGAGGCTGGAGGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSEILLLD*RLEVVL
Trigger: GAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTAT...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATAATGGATACTGCTGCTaGACTGGAGGCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHNGYCC*TGGWRW
Trigger: CCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGAATGGATACTGCTGCTaGACTGGAGGCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLPDKLLNIRDPETSAPRNGYCC*TGGWRW
Trigger: CCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT...CCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCCTGCGTCGGATTCTCTaGAGGAATGGATACTGCTGC +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESLRRIL*RNGYCC
Trigger: GCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAG...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CTGCCTGCGTCGGATTCTCTGGAGGAATGGATACTGCTGCTGGACTGGAGGCTGTGCAGGCAACAGTCATaGGTACAACAAATTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LPASDSLEEWILLLDWRLCRQQS*VQQIVS
Trigger: AGAGACAATTTGTTGTACCCATGACTGTTGCCTGCA...CAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGCCTTCCCCTCACCTTTaGGGAGGCAGAAAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLPSPHL*GGRKAA
Trigger: TGCTGCTTTTCTGCCTCCCCAAAGGTGAGGGGAAGG...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACAACAGGTGCTGCGTGCTaGGCTTATCCAAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTTGAAC*AYPRHV
Trigger: CACATGCCTTGGATAAGCTCAGCACGCAGCACCTGT...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGACTACAGGTGCTGCGTGCTaGGCTTATCCAAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: KHVGHLVRAGICSVHSETTGAAC*AYPRHV
Trigger: CACATGCCTTGGATAAGCTCAGCACGCAGCACCTGT...AGTCTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCAGAGCATCAGGCTGCTaGTGTCAAACACGACGTTGG +
Preference number: 4 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVRASGC*CQTRRW
Trigger: CCAACGTCGTGTTTGACATCAGCAGCCTGATGCTCT...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGTTGCTGTTCTCTAAGTaGGCAAGGAGGCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRLLFSK*ARRLGL
Trigger: GAGTCCCAGCCTCCTTGCTCACTTAGAGAACAGCAA...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTTGCTGTTCTCTAAGTaGGCAAGGAGGCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLLLFSK*ARRLGL
Trigger: GAGTCCCAGCCTCCTTGCTCACTTAGAGAACAGCAA...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATGGTGCATCGATGTTTaGTCTTCAGGTGAACAGCAT +
Preference number: 4 (lower is better)
Translates to: NGYCCWTGGWRWCSSQGPWCIDV*SSGEQH
Trigger: ATGCTGTTCACCTGAAGATCAAACATCGATGCACCA...TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGGAGGGCTGCGTCGGCCAGGGCTTGTaGGTGCCAGATTTGATTTTG +
Preference number: 4 (lower is better)
Translates to: PYIFTKNSSRRSLLREGCVGQGL*VPDLIL
Trigger: CAAAATCAAATCTGGCACTCACAAGCCCTGGCCGAC...GCAGCCCTCCCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCCTTATTTCAGTCCTTaGAATGCACCGGGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWPYFSP*NAPGPV
Trigger: AACAGGACCCGGTGCATTTCAAGGACTGAAATAAGG...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTCTGGAGGACCTTATTTCAGTCCTTaGAATGCACCGGGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: NVIEKNPLIAACVGFSGGPYFSP*NAPGPV
Trigger: AACAGGACCCGGTGCATTTCAAGGACTGAAATAAGG...TCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCACTCACTTCGCTGTaGATGTGCTCATCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHSLTSL*MCSSPS
Trigger: GGAAGGGGATGAGCACATTCACAGCGAAGTGAGTGA...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTCACTCACTTCGCTGTaGATGTGCTCATCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLSLTSL*MCSSPS
Trigger: GGAAGGGGATGAGCACATTCACAGCGAAGTGAGTGA...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCATTGATGACGTCCTGGTaGGAGGGCTCACTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: VVHSQGPLVAVHFVANVALMTSW*EGSLWF
Trigger: GAACCACAGTGAGCCCTCTCACCAGGACGTCATCAA...TGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCTGCGACTAATCTACTGAAGTaGAGGGAATGTTTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SSAMPLPYPFRWESSVPATNLLK*RECFCG
Trigger: TCCACAAAAACATTCCCTTCACTTCAGTAGATTAGT...CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGGTGCATAGTTTCTCCTaGGGAGAAGCCTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWVHSFS*GEASGI
Trigger: TATTCCAGAGGCTTCTCCTCAGGAGAAACTATGCAC...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTATTGTCGGCTCTTCCTaGCCCCAAAGGAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTIVGSS*PQRNFS
Trigger: GCTGAAGTTCCTTTGGGGTCAGGAAGAGCCGACAAT...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTCTGCAGGGCAGCTaGACCAAAGTTTGCACAGGA +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHSLQGS*TKVCTG
Trigger: TCCTGTGCAAACTTTGGTTCAGCTGCCCTGCAGAGA...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp GGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGGAGGGAGAGAATCTCCCGTATaGAGACAGCAGGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GTIYLHQKFIAEVLAKGGRESPV*RQQVPG
Trigger: GCCTGGAACCTGCTGTCTTCATACGGGAGATTCTCT...CCCTCCCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411752.5
CDS-3UTR TCA 90 bp CATTGCCCCACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAATGCTGCATTCAGTGCTACCATaGAACCATTCTGGGCAATGT +
Preference number: 4 (lower is better)
Translates to: HCPTPRTLHSIRQPERMLHSVLP*NHSGQC
Trigger: ACATTGCCCAGAATGGTTTCATGGTAGCACTGAATG...CAGCATTCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTGGGGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468187.6
ENST00000471301.3
CDS-3UTR GCA 90 bp CTTCCTCATTGCCCCACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGATTAGTATCAGCGTTTTaGCATGTCCCCATGAACCCT +
Preference number: 4 (lower is better)
Translates to: LPHCPTPRTLHSIRQPERLVSAF*HVPMNP
Trigger: AGGGTTCATGGGGACATGGCAAAACGCTGATACTAA...TCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTGGGGCAATGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468187.6
CDS-3UTR GCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCTTATCCAAGGCATGTaGCACCCAGCCATGTTTACA +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWLIQGM*HPAMFT
Trigger: TGTAAACATGGCTGGGTGGCACATGCCTTGGATAAG...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GGAAGGATGAGGATGATGAAACTACACAAGGAAGGACGGGTATGTGGGCAACAGAGGCCGTGCAGTATGTaGAGTACCTCCTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: GRMRMMKLHKEGRVCGQQRPCSM*STSSCF
Trigger: GAAGCAAGAGGAGGTACTGCACATACTGCACGGCCT...CTGTTGCCCACATACCCGTCCTTCCTTGTGTAGTTTCATCATCCTCATCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp ACTCCAGCTACAGGAAATATGCGACTCGTCTGGGACAGATCAAACATGACCTTAAGCGGTCCAGCACCTTaGCAGCAGCATCCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: TPATGNMRLVWDRSNMTLSGPAP*QQHPEG
Trigger: TCCTTCAGGATGCTGCTGGCAAGGTGCTGGACCGCT...TAAGGTCATGTTTGATCTGTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp CTGCCTGCGTCGGATTCTCTGGAGGAATGGATACTGCTGCTGGACTGGAGGCTGTTTCGAAGTGATGAATaGTGGAAGGATTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LPASDSLEEWILLLDWRLFRSDE*WKDCCS
Trigger: AGAACAGCAATCCTTCCAGCATTCATCACTTCGAAA...CAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACAATGCTGGTTGTCAAGTaGAGCCCCCGCCTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTMLVVK*SPRLLV
Trigger: GACCAAGAGGCGGGGGCTGCACTTGACAACCAGCAT...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380667.6
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACATGTGCCATCTCGGCATaGTGGTTGTCAAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTCAISA*WLSSAA
Trigger: GGCTGCACTTGACAACCAGCATGCCGAGATGGCACA...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380667.6
ENST00000484726.5
CDS-3UTR GCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTGGGACCTTGAAATATaGTGGCCAGTCTTGCTCACT +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHWDLEI*WPVLLT
Trigger: AGTGAGCAAGACTGGCCAGCATATTTCAAGGTCCCA...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000484726.5
CDS-3UTR GCA 90 bp ACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATGTAGTCGAATGTCTTCCCACATaGATTACAGAACACTCTTCC +
Preference number: 4 (lower is better)
Translates to: TAAGLEAGGGAQVKDHVVECLPT*ITEHSS
Trigger: GGAAGAGTGTTCTGTAATGCATGTGGGAAGACATTC...GACTACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GAGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGGAATGTCTTCCCACATaGATTACAGAACACTCTTCC +
Preference number: 4 (lower is better)
Translates to: EEWILLLDWRLEVVLKSRECLPT*ITEHSS
Trigger: GGAAGAGTGTTCTGTAATGCATGTGGGAAGACATTC...CCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATGCGAGGATTGGGGTTTaGACTGTGGCGATTACGACT +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHARIGV*TVAITT
Trigger: AGTCGTAATCGCCACAGTGCAAACCCCAATCCTCGC...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCGCGAGGATTGGGGTTTaGACTGTGGCGATTACGACT +
Preference number: 4 (lower is better)
Translates to: VAHDPTIAPRQAAEHKRSARIGV*TVAITT
Trigger: AGTCGTAATCGCCACAGTGCAAACCCCAATCCTCGC...GGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGGGTGGCCATCATCACTaGTGGCACTACTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: CTLRVPLLLYILWQMLHMGGHHH*WHYWLR
Trigger: TCTGAGCCAGTAGTGCCAGCAGTGATGATGGCCACC...CATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACAATCTTCACAGGCATaGTTGACTTCCTGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: RNGYCCWTGGWRWCSSQGQSSQA*LTSWAF
Trigger: AAAAGCCCAGGAAGTCAAGCATGCCTGTGAAGATTG...TCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATGGTCTTCAGAAGTCATaGTGTCGGCCCTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHGLQKS*CRPSLF
Trigger: AAATAAGGAGGGCCGACAGCATGACTTCTGAAGACC...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCGATGTAAAGCTCTCATaGAAGGCGGCCATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVDVKLS*KAAMLA
Trigger: TGCCAGCATGGCCGCCTTGCATGAGAGCTTTACATC...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGGAGGGCTGCGATGTAAAGCTCTCATaGAAGGCGGCCATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PYIFTKNSSRRSLLREGCDVKLS*KAAMLA
Trigger: TGCCAGCATGGCCGCCTTGCATGAGAGCTTTACATC...GCAGCCCTCCCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTAGAACTTTTGAGGGCTaGCATAATTCAGAGACGATG +
Preference number: 4 (lower is better)
Translates to: SPRQCHREESPHRCLRRIRTFEG*HNSETM
Trigger: CATCGTCTCTGAATTATGGCAGCCCTCAAAAGTTCT...AATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTTCGAGCCCCATGGGGTaGTGGGCACCATATATCTTC +
Preference number: 4 (lower is better)
Translates to: THTPQVHKRTLTMAVQTRSSPMG*WAPYIF
Trigger: GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGA...ACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ATTTTGTGGCAAATGTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAGGAATGGATACTGCTaGTGGACTGGAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ILWQMLHMIPPLLPDKLLRNGYC*WTGGWR
Trigger: CCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT...CAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACATTTGCCACAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCAAGGAATGGATACTGCTaGTGGACTGGAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VVHSQGPLVAVHFVANVARNGYC*WTGGWR
Trigger: CCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT...TGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGTGGAGGAATGGATACTaGTGCTGGACTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CWAPYIFTKNSSRRSLLRWRNGY*CWTGGW
Trigger: CCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCA...CCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TACATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCGAATCCCCTCATCGCTaGCTGCGTCGGATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: YINAHTHTHTHTPQVHKRESPHR*LRRILW
Trigger: CCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTC...GCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACAGAGGAAAACATCATATTGCAACCTGGGACTTTGCACTTGTGCATTTCTCTCGGCCTCGGCCTTGTGTaGCGACTCCCCACTGTCACT +
Preference number: 4 (lower is better)
Translates to: TEENIILQPGTLHLCISLGLGLV*RLPTVT
Trigger: AGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCC...GAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCAATATGATGTTTTCCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATCAGGGTCCCCTTGTTaGTGTACATTTTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: NGYCCWTGGWRWCSSQGPSGSPC*CTFCGK
Trigger: TTTGCCACAAAATGTACAGCAACAAGGGGACCCTGA...TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCAGGTGGGAGTCTTCAGTCCCAGAGCATACATAAATaGACACACACACACACACAC +
Preference number: 4 (lower is better)
Translates to: CSPLPCLSHTRSGGSLQSQSIHK*THTHTH
Trigger: GTGTGTGTGTGTGTGTGTGCATTTATGTATGCTCTG...GGACTGAAGACTCCCACCTGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTTGCGAGGCAGAGCTATaGCAGTCTTTTCTCTCGAGC +
Preference number: 4 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTCEAEL*QSFLSS
Trigger: GCTCGAGAGAAAAGACTGGCATAGCTCTGCCTCGCA...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTAACGATCCATGCTGGTaGCATTCGCACCTACTCCTC +
Preference number: 4 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTNDPCW*HSHLLL
Trigger: GAGGAGTAGGTGCGAATGGCACCAGCATGGATCGTT...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp TTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCACCAAAAATATGTTGGCAGGAGATaGAGGCTGTCTCGATGTCCT +
Preference number: 4 (lower is better)
Translates to: FPDIEPHGVLGTIYLHQKYVGRR*RLSRCP
Trigger: AGGACATCGAGACAGCCTGCATCTCCTGCCAACATA...TTTTTGGTGAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418777.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CATTGCCCCACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAATGCTGTTTCAGGGTTTCATGTaGCACCCAGCCATGTTTACA +
Preference number: 4 (lower is better)
Translates to: HCPTPRTLHSIRQPERMLFQGFM*HPAMFT
Trigger: TGTAAACATGGCTGGGTGGCACATGAAACCCTGAAA...CAGCATTCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTGGGGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468187.6
ENST00000471301.3
CDS-3UTR CCA 90 bp TTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGTGTCCCCATGAACCCTaGTTCAGCCGTAGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: LLPDKLLNIRDPETSAPRCPHEP*FSRSRS
Trigger: AGAACGACTACGGCTGAACCAGGGTTCATGGGGACA...CCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCAGGTTAATCTTCCCTaGCTGAAAACATTCACATGT +
Preference number: 4 (lower is better)
Translates to: GGVFPDIEPHGVLGTIYLQVNLP*LKTFTC
Trigger: ACATGTGAATGTTTTCAGCCAGGGAAGATTAACCTG...AAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTTGCACAATCTCCACTTaGGTGGGGTGGTACAGGTGC +
Preference number: 4 (lower is better)
Translates to: THTPQVHKRTLTMAVQTRCTIST*VGWYRC
Trigger: GCACCTGTACCACCCCACCCAAGTGGAGATTGTGCA...ACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATAGTGAGCAAGGAGGCTaGGACTCCTGGTGCGATTAT +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHSEQGG*DSWCDY
Trigger: ATAATCGCACCAGGAGTCCCAGCCTCCTTGCTCACT...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGAAGGATGAGGATGATGAAACTACACAAGGAAGGACGGGTATGTGGGCAACAGAGTGAGCAAGGAGGCTaGGACTCCTGGTGCGATTAT +
Preference number: 4 (lower is better)
Translates to: GRMRMMKLHKEGRVCGQQSEQGG*DSWCDY
Trigger: ATAATCGCACCAGGAGTCCCAGCCTCCTTGCTCACT...CTGTTGCCCACATACCCGTCCTTCCTTGTGTAGTTTCATCATCCTCATCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp TCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCGAAGTGATGAATGCTaGAAGGATTGCTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: SPRQCHREESPHRCLRRIRSDEC*KDCCSL
Trigger: TAGAGAACAGCAATCCTTCCAGCATTCATCACTTCG...AATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GAGGCGTCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCACAGGGTTTATGTACTaGAATGGAAGCAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: EASSLTSSPMGCWAPYIFTGFMY*NGSRNA
Trigger: TGCATTTCTGCTTCCATTCCAGTACATAAACCCTGT...GAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGACGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ATGTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATTATGTGGAGGTGGGGTaGGCCCAAGGTGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: MLHMIPPLLPDKLLNIRDYVEVG*AQGVPS
Trigger: AGATGGCACACCTTGGGCCCACCCCACCTCCACATA...ATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR CCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTTGGGGTTTGCACTGTaGCGATTACGACTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHLGFAL*RLRLRR
Trigger: CCTCCGAAGTCGTAATCGCCACAGTGCAAACCCCAA...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGGAGGGCTGCTTGGGGTTTGCACTGTaGCGATTACGACTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: PYIFTKNSSRRSLLREGCLGFAL*RLRLRR
Trigger: CCTCCGAAGTCGTAATCGCCACAGTGCAAACCCCAA...GCAGCCCTCCCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTGTGAAGGCGAGGATTaGGGTTTGCACTGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHCEGED*GLHCGD
Trigger: ATCGCCACAGTGCAAACCCCAATCCTCGCCTTCACA...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGACCATGGCAGCTCCTGAGGTaGCCCGAATTAAATCTTTAT +
Preference number: 4 (lower is better)
Translates to: NGYCCWTGGWRWCSSQGPWQLLR*PELNLY
Trigger: ATAAAGATTTAATTCGGGCCACCTCAGGAGCTGCCA...TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ATCATATTGCAACCTGGGACTTTGCACTTGTGCATTTCTCTCAAATGCACAGTTCACTGCTGGCACTACTaGCTCAGAGGGTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: IILQPGTLHLCISLKCTVHCWHY*LRGWRG
Trigger: CCCCCGCCACCCTCTGAGCCAGTAGTGCCAGCAGTG...AACTGTGCATTTGAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCAATATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGACTTCAGCACTGGGCTCATaGGTGGCCATCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: KHVGHLVRAGICSVHSETSALGS*VAIITA
Trigger: AGCAGTGATGATGGCCACCCATGAGCCCAGTGCTGA...AGTCTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GTGGAGATTAGGGTTCTGACTGTGCCGATTTCGGCTTCGTACAGAGGAAAACATTCCTGGGCTTTTTCTTaGGTGCCAGGTCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: VEIRVLTVPISASYRGKHSWAFS*VPGQHW
Trigger: CCAGTGCTGACCTGGCACCCAAGAAAAAGCCCAGGA...ATGTTTTCCTCTGTACGAAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGATTCCTCGCCCAGTTTaGGCTCCGAAGACTCAGACT +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLIPRPV*APKTQT
Trigger: AGTCTGAGTCTTCGGAGCCCAAACTGGGCGAGGAAT...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCATTCCTCGCCCAGTTTaGGCTCCGAAGACTCAGACT +
Preference number: 4 (lower is better)
Translates to: VAHDPTIAPRQAAEHKRSIPRPV*APKTQT
Trigger: AGTCTGAGTCTTCGGAGCCCAAACTGGGCGAGGAAT...GGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGACTAGCCCCATGGGGTGCTaGGCACCATATATCTTCACC +
Preference number: 4 (lower is better)
Translates to: KHVGHLVRAGICSVHSETSPMGC*APYIFT
Trigger: GGTGAAGATATATGGTGCCCAGCACCCCATGGGGCT...AGTCTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACACCATACCCGTTCAGGTaGGAGTCTTCAGTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTPYPFR*ESSVPA
Trigger: CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGG...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTACTGGAGGCTGGAGGTaGTGCTCAAGTCAAGGACCA +
Preference number: 4 (lower is better)
Translates to: THTPQVHKRTLTMAVQTRTGGWR*CSSQGP
Trigger: TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGT...ACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCATGCTGGACTGGAGGCTaGAGGTGGTGCTCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: VVHSQGPLVAVHFVANVACWTGG*RWCSSQ
Trigger: TTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCA...TGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACAAATGGATACTGCTGCTaGACTGGAGGCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTNGYCC*TGGWRW
Trigger: CCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAATGGATACTGCTGCTaGACTGGAGGCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: THTPQVHKRTLTMAVQTRNGYCC*TGGWRW
Trigger: CCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATT...ACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCACCAAAAAGATTCTCTGGAGGAATaGATACTGCTGCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: FPDIEPHGVLGTIYLHQKDSLEE*ILLLDW
Trigger: CCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATC...TTTTTGGTGAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGAAGGATGAGGATGATGAAACTACACAAGGAAGGACGGGTATGTGGGCAACAGCTGCGTCGGATTCTCTaGAGGAATGGATACTGCTGC +
Preference number: 4 (lower is better)
Translates to: GRMRMMKLHKEGRVCGQQLRRIL*RNGYCC
Trigger: GCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAG...CTGTTGCCCACATACCCGTCCTTCCTTGTGTAGTTTCATCATCCTCATCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp CCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCTGCGTCGGATTCTCTaGAGGAATGGATACTGCTGC +
Preference number: 4 (lower is better)
Translates to: PPLLPDKLLNIRDPETSALRRIL*RNGYCC
Trigger: GCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAG...GGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGCCAGGGCCAGATGAATaGAGCTCTCTCACACACCCA +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSEPGPDE*SSLTHP
Trigger: TGGGTGTGTGAGAGAGCTCCATTCATCTGGCCCTGG...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp CATTGCCCCACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAATGCTGTTAATCTTCCCTGGCTaGAAACATTCACATGTGCAG +
Preference number: 4 (lower is better)
Translates to: HCPTPRTLHSIRQPERMLLIFPG*KHSHVQ
Trigger: CTGCACATGTGAATGTTTTCAGCCAGGGAAGATTAA...CAGCATTCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTGGGGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468187.6
ENST00000471301.3
CDS-3UTR TCA 90 bp GTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCAAGAGCATCAGGCTGCTaGTGTCAAACACGACGTTGG +
Preference number: 4 (lower is better)
Translates to: VVHSQGPLVAVHFVANVARASGC*CQTRRW
Trigger: CCAACGTCGTGTTTGACATCAGCAGCCTGATGCTCT...TGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GGGCTGCGACGAGTCCAGGCCCATGTCATCGAGTTCTTTGGTCAACAGTTTACGATCCTTCTCATCCGATaGATCCGGAATGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GLRRVQAHVIEFFGQQFTILLIR*IRNELF
Trigger: AAAAAGCTCATTCCGGATTCATCGGATGAGAAGGAT...CGTAAACTGTTGACCAAAGAACTCGATGACATGGGCCTGGACTCGTCGCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGTGGTGCATCGATGTTTaGTCTTCAGGTGAACAGCAT +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWWCIDV*SSGEQH
Trigger: ATGCTGTTCACCTGAAGATCAAACATCGATGCACCA...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GGAAGGATGAGGATGATGAAACTACACAAGGAAGGACGGGTATGTGGGCAACAGCTTAGCATAGGCATGTaGAGGCGAGGATTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: GRMRMMKLHKEGRVCGQQLSIGM*RRGLGF
Trigger: AAACCCCAATCCTCGCCTTCACATGCCTATGCTAAG...CTGTTGCCCACATACCCGTCCTTCCTTGTGTAGTTTCATCATCCTCATCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp GTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCCTTAGCATAGGCATGTaGAGGCGAGGATTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: VAHDPTIAPRQAAEHKRSLSIGM*RRGLGF
Trigger: AAACCCCAATCCTCGCCTTCACATGCCTATGCTAAG...GGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGATTTTGTACTTGCTATaGCAGGGGTGGCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLILYLL*QGWQLL
Trigger: CAGGAGCTGCCACCCCTGTCATAGCAAGTACAAAAT...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCCATTTCCCCTGGAGTaGGTAAACTTCTATAAAATG +
Preference number: 4 (lower is better)
Translates to: SPRQCHREESPHRCLRRIPFPLE*VNFYKM
Trigger: CATTTTATAGAAGTTTACTCACTCCAGGGGAAATGG...AATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TACATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCTACCACTGGTTGGAATaGTGGGACTGGTTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: YINAHTHTHTHTPQVHKRYHWLE*WDWLGG
Trigger: CCCTCCCAACCAGTCCCATCATTCCAACCAGTGGTA...GCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GTGGAGATTAGGGTTCTGACTGTGCCGATTTCGGCTTCGTACAGAGGAAAACATTCACTCACTTCGCTGTaGATGTGCTCATCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VEIRVLTVPISASYRGKHSLTSL*MCSSPS
Trigger: GGAAGGGGATGAGCACATTCACAGCGAAGTGAGTGA...ATGTTTTCCTCTGTACGAAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CAAGACTACCACGTGTGGTTTATCTCTGAGGGAAAATGTGAAGAGAAGTTACTTAGGAGGCGTCTTCCCTaGCATCGAGCCCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: QDYHVWFISEGKCEEKLLRRRLP*HRAPWG
Trigger: ACCCCATGGGGCTCGATGTCAGGGAAGACGCCTCCT...AAGTAACTTCTCTTCACATTTTCCCTCAGAGATAAACCACACGTGGTAGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGTGGAGATTAGGGTTCTaGCTGTGCCGATTTCGGCTT +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRWRLGF*LCRFRL
Trigger: AAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCA...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GGTGCTCAAGTCAAGGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTCACTTCTGCCTCTTCTaGCTCAATTTGAGATGTATC +
Preference number: 4 (lower is better)
Translates to: GAQVKDHVVLCHASPIPVHFCLF*LNLRCI
Trigger: GATACATCTCAAATTGAGTCAGAAGAGGCAGAAGTG...AACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCCTTGACTTGAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR TCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATACTCTGTTTTCACCCTaGAATCAAAGATCCCACTCC +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHTLFSP*NQRSHS
Trigger: GGAGTGGGATCTTTGATTTCAGGGTGAAAACAGAGT...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TCCTCTTTCTCACTCTCAATTGCTTGGTTTCAGGCTTGCTTTCATTTCTCTCTGCCAGGAGAGCTGGGCTaGAGCAGAGAGGGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: SSFSLSIAWFQACFHFSLPGELG*SREGVV
Trigger: GACAACACCCTCTCTGCTTCAGCCCAGCTCTCCTGG...CAGAGAGAAATGAAAGCAAGCCTGAAACCAAGCAATTGAGAGTGAGAAAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp TTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGCAGAGTCTCTCCCCATaGTACAAGGAGACCGTTTTG +
Preference number: 4 (lower is better)
Translates to: LLPDKLLNIRDPETSAPRQSLSP*YKETVL
Trigger: CAAAACGGTCTCCTTGTATCATGGGGAGAGACTCTG...CCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR GCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACAGGGTGGTACAGGTGCTaGGTGCTGAGCTTATCCAAG +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTGWYRC*VLSLSK
Trigger: CTTGGATAAGCTCAGCACGCAGCACCTGTACCACCC...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACTCCAGCTACAGGAAATATGCGACTCGTCTGGGACAGATCAAACATGACCTTAGGGTGGTACAGGTGCTaGGTGCTGAGCTTATCCAAG +
Preference number: 4 (lower is better)
Translates to: TPATGNMRLVWDRSNMTLGWYRC*VLSLSK
Trigger: CTTGGATAAGCTCAGCACGCAGCACCTGTACCACCC...TAAGGTCATGTTTGATCTGTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTGCAGTACCTCCTCTTaGTTCAGGACGCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHCSTSS*FRTLKR
Trigger: TCTCTTCAGCGTCCTGAAGCAAGAGGAGGTACTGCA...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGAGGCCGTGCAGTATGTaGAGTACCTCCTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSERPCSM*STSSCF
Trigger: GAAGCAAGAGGAGGTACTGCACATACTGCACGGCCT...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACAAGGCCGTGCAGTATGTaGAGTACCTCCTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTRPCSM*STSSCF
Trigger: GAAGCAAGAGGAGGTACTGCACATACTGCACGGCCT...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCAGCCTCAACCCTGGTTaGTCTAACAGTAGCCCATTT +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESSLNPG*SNSSPF
Trigger: AAATGGGCTACTGTTAGAGCAACCAGGGTTGAGGCT...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGCTGCCATGGGACCTTGAAATATaGTGGCCAGTCTTGCTCACT +
Preference number: 4 (lower is better)
Translates to: PDKLLNIRDPETSAPRLPWDLEI*WPVLLT
Trigger: AGTGAGCAAGACTGGCCAGCATATTTCAAGGTCCCA...TGGCAGCCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR GCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTGCAGTTTACCAGTGTaGAACGGATGGCCTCAATTT +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHCSLPV*NGWPQF
Trigger: AAATTGAGGCCATCCGTTGCACACTGGTAAACTGCA...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380667.6
CDS-3UTR GCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGCTAGGGAGAGGATTTTaGAAGACAGGGTCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLLGRGF*KTGSRG
Trigger: CCCTCTAGACCCTGTCTTGCAAAATCCTCTCCCTAG...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGCTAGGGAGAGGATTTTaGAAGACAGGGTCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLPDKLLNIRDPETSAPRLGRGF*KTGSRG
Trigger: CCCTCTAGACCCTGTCTTGCAAAATCCTCTCCCTAG...CCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCAATCTTCACAGGCATaGTTGACTTCCTGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWQSSQA*LTSWAF
Trigger: AAAAGCCCAGGAAGTCAAGCATGCCTGTGAAGATTG...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCAGTCCTTCACAGACATaGCTGGGCTCATCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVSPSQT*LGSSPL
Trigger: AAGAGGAGATGAGCCCAGGCATGTCTGTGAAGGACT...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACAGATGTAAAGCTCTCATaGAAGGCGGCCATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTDVKLS*KAAMLA
Trigger: TGCCAGCATGGCCGCCTTGCATGAGAGCTTTACATC...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GTGGAGATTAGGGTTCTGACTGTGCCGATTTCGGCTTCGTACAGAGGAAAACATGATGTAAAGCTCTCATaGAAGGCGGCCATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VEIRVLTVPISASYRGKHDVKLS*KAAMLA
Trigger: TGCCAGCATGGCCGCCTTGCATGAGAGCTTTACATC...ATGTTTTCCTCTGTACGAAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTTGTGTGCCGACTCCCCACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATAGAACTTTTGAGGGCTaGCATAATTCAGAGACGATG +
Preference number: 4 (lower is better)
Translates to: LVCRLPTVTRPVNVIEKNRTFEG*HNSETM
Trigger: CATCGTCTCTGAATTATGGCAGCCCTCAAAAGTTCT...ATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTGGGGAGTCGGCACACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGAAGAACTTTTGAGGGCTaGCATAATTCAGAGACGATG +
Preference number: 4 (lower is better)
Translates to: RNGYCCWTGGWRWCSSQGRTFEG*HNSETM
Trigger: CATCGTCTCTGAATTATGGCAGCCCTCAAAAGTTCT...TCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGCAACCAGCCACTGTaGAGACGTGCATCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: VAHDPTIAPRQAAEHKRSCNQPL*RRASLS
Trigger: TGAAAGAGATGCACGTCTGCACAGTGGCTGGTTGCA...GGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACAAGGGGAATGCAGCATTaGAACCAGCCACTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTRGMQH*NQPLCR
Trigger: TCTGCACAGTGGCTGGTTGCAATGCTGCATTCCCCT...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACAGGAGGCTGGAGGTGGTaGTCAAGTCAAGGACCATGT +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTGGWRW*SSQGPC
Trigger: ACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCC...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTTTAAAGGGGTACTCTGTTTTCACCCTGAAATCAAAGATCGGCCTCGGCCTTGTGTaGCGACTCCCCACTGTCACT +
Preference number: 4 (lower is better)
Translates to: CVCVCLKGYSVFTLKSKIGLGLV*RLPTVT
Trigger: AGTGACAGTGGGGAGTCGGCACACAAGGCCGAGGCC...GATCTTTGATTTCAGGGTGAAAACAGAGTACCCCTTTAAACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGTGCAACCTGGGACTTTaGACTTGTGCATTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWCNLGL*TCAFLS
Trigger: TGAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCA...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATGATGATACCGATACCTaGACGTGTCTTACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHDDTDT*TCLTWL
Trigger: CAGCCAGGTAAGACACGTGCAGGTATCGGTATCATC...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACACAGGTCAGTTCACCTTaGAGGGACTGGCGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTQVSSP*RDWRFL
Trigger: GAGAAAGCGCCAGTCCCTGCAAGGTGAACTGACCTG...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGCTCCCACTGAAACAGTaGCAGGTCAGTTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSELPLKQ*QVSSPC
Trigger: GCAAGGTGAACTGACCTGGCACTGTTTCAGTGGGAG...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp AATGCATTCAGTGCTACCATGAAACCATTCTGGGCAATGTATCTTGGTAGTTTTCGGATGGCCATGAGCTaGAGCGGCCTCCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: NAFSATMKPFWAMYLGSFRMAMS*SGLPAS
Trigger: ACTGGCTGGGAGGCCGCTGCAGCTCATGGCCATCCG...AAAACTACCAAGATACATTGCCCAGAATGGTTTCATGGTAGCACTGAATGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471301.3
CDS-3UTR GCA 90 bp AGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGAGAAAAATACCACCGGTaGACTCAGTATGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: RNGYCCWTGGWRWCSSQGEKYHR*TQYVHS
Trigger: AGAATGCACATACTGAGTGCACCGGTGGTATTTTTC...TCCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR CCA 90 bp CACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAATGCTGTGTTTCACTGGTTCCGAACTGCATaGAGTTGTCAGTACAGGAGT +
Preference number: 4 (lower is better)
Translates to: HTQDTAQYKAAGKNAVFHWFRTA*SCQYRS
Trigger: ACTCCTGTACTGACAACTCCATGCAGTTCGGAACCA...GTGAAACACAGCATTCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468187.6
CDS-3UTR CCA 90 bp CACTGTCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCAGGTTAATCTTCCCTaGCTGAAAACATTCACATGT +
Preference number: 4 (lower is better)
Translates to: HCHSPRQCHREESPHRCLQVNLP*LKTFTC
Trigger: ACATGTGAATGTTTTCAGCCAGGGAAGATTAACCTG...CAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACAGGAGGCTGGGACTCCTaGTGCGATTATTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTGGWDS*CDYCSQ
Trigger: TTGAGAGCAATAATCGCACCAGGAGTCCCAGCCTCC...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GCTACAGTGGCAAGCATGAGTAATGATCAAGAAAGGAACGATCCATGCTGGTGCGGAGGCTGGGACTCCTaGTGCGATTATTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: ATVASMSNDQERNDPCWCGGWDS*CDYCSQ
Trigger: TTGAGAGCAATAATCGCACCAGGAGTCCCAGCCTCC...GCACCAGCATGGATCGTTCCTTTCTTGATCATTACTCATGCTTGCCACTGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp TGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGGGAGGCTGGGACTCCTaGTGCGATTATTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: CTLRVPLLLYILWQMLHMGGWDS*CDYCSQ
Trigger: TTGAGAGCAATAATCGCACCAGGAGTCCCAGCCTCC...CATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ATTTTGTGGCAAATGTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGGTAATTAAGGCTATGTaGAGGTGGGGTGGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: ILWQMLHMIPPLLPDKLLVIKAM*RWGGPK
Trigger: CTTGGGCCCACCCCACCTCCACATAGCCTTAATTAC...CAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACATTTGCCACAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR CCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATGACCTTGAAATATGCTaGCCAGTCTTGCTCACTAAG +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHDLEIC*PVLLTK
Trigger: CTTAGTGAGCAAGACTGGCCAGCATATTTCAAGGTC...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000484726.5
CDS-3UTR CCA 90 bp ACATCATATTGCAACCTGGGACTTTGCACTTGTGCATTTCTCTCAAATGCACAGGGGAGAGACACAGGCTaGCTCGGTTTTGGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TSYCNLGLCTCAFLSNAQGRDTG*LGFGLH
Trigger: GTGGAGCCCAAAACCGAGCCAGCCTGTGTCTCTCCC...CTGTGCATTTGAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCAATATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACAGGGCAGAATTCTGAATaGGAGAGACACAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTGQNSE*ERHRLA
Trigger: AGCCAGCCTGTGTCTCTCCCATTCAGAATTCTGCCC...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTGGCAGCTCCTGAGGTaGCCCGAATTAAATCTTTAT +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHWQLLR*PELNLY
Trigger: ATAAAGATTTAATTCGGGCCACCTCAGGAGCTGCCA...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTCTGGAGGATGGCAGCTCCTGAGGTaGCCCGAATTAAATCTTTAT +
Preference number: 4 (lower is better)
Translates to: NVIEKNPLIAACVGFSGGWQLLR*PELNLY
Trigger: ATAAAGATTTAATTCGGGCCACCTCAGGAGCTGCCA...TCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GTGTGTGTGTATGTGCATGTGTGTGTGTGTGTGTTTAAAGGGGTACTCTGTTTTGTGCCAGGTCAGCACTaGGCTCATGGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: VCVYVHVCVCVFKGVLCFVPGQH*AHGWPS
Trigger: TGATGGCCACCCATGAGCCCAGTGCTGACCTGGCAC...AAAACAGAGTACCCCTTTAAACACACACACACACACATGCACATACACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCCCGCTCAGGTTCTTaGTCTTCAGAAGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHSRSGS*SSEVML
Trigger: CAGCATGACTTCTGAAGACCAAGAACCTGAGCGGGA...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCTCCCGCTCAGGTTCTTaGTCTTCAGAAGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVSRSGS*SSEVML
Trigger: CAGCATGACTTCTGAAGACCAAGAACCTGAGCGGGA...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GCTACAGTGGCAAGCATGAGTAATGATCAAGAAAGGAACGATCCATGCTGGTGCATTCCTCGCCCAGTTTaGGCTCCGAAGACTCAGACT +
Preference number: 4 (lower is better)
Translates to: ATVASMSNDQERNDPCWCIPRPV*APKTQT
Trigger: AGTCTGAGTCTTCGGAGCCCAAACTGGGCGAGGAAT...GCACCAGCATGGATCGTTCCTTTCTTGATCATTACTCATGCTTGCCACTGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp ATGTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATGCTCATCCCCTTCCATaGATTCCTCGCCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: MLHMIPPLLPDKLLNIRDAHPLP*IPRPVW
Trigger: CCAAACTGGGCGAGGAATCCATGGAAGGGGATGAGC...ATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTTGTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTCCATACCCGTTCAGGTaGGAGTCTTCAGTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: FVVHSQGPLVAVHFVANVPYPFR*ESSVPA
Trigger: CGCAGGGACTGAAGACTCCCACCTGAACGGGTATGG...AACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GTGGAGATTAGGGTTCTGACTGTGCCGATTTCGGCTTCGTACAGAGGAAAACATCTGCGTCGGATTCTCTaGAGGAATGGATACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VEIRVLTVPISASYRGKHLRRIL*RNGYCC
Trigger: GCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAG...ATGTTTTCCTCTGTACGAAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TCACTCGCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGTTGCTGTACATTTTGTaGCAAATGTTGCACATGATC +
Preference number: 4 (lower is better)
Translates to: SLAPSMSSRRIPSSLPASLLYIL*QMLHMI
Trigger: GATCATGTGCAACATTTGCCACAAAATGTACAGCAA...CGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGCGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CTGCCTGCGTCGGATTCTCTGGAGGAATGGATACTGCTGCTGGACTGGAGGCTGTTGCTGTACATTTTGTaGCAAATGTTGCACATGATC +
Preference number: 4 (lower is better)
Translates to: LPASDSLEEWILLLDWRLLLYIL*QMLHMI
Trigger: GATCATGTGCAACATTTGCCACAAAATGTACAGCAA...CAGCCTCCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ACTCCAGCTACAGGAAATATGCGACTCGTCTGGGACAGATCAAACATGACCTTAGGCCACCGTAACGACTaGGCACTTGAGGCACAAAAG +
Preference number: 4 (lower is better)
Translates to: TPATGNMRLVWDRSNMTLGHRND*ALEAQK
Trigger: CTTTTGTGCCTCAAGTGCCCAGTCGTTACGGTGGCC...TAAGGTCATGTTTGATCTGTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp GCTACAGTGGCAAGCATGAGTAATGATCAAGAAAGGAACGATCCATGCTGGTGCAGGAACGATCCATGCTaGTGCCATTCGCACCTACTC +
Preference number: 4 (lower is better)
Translates to: ATVASMSNDQERNDPCWCRNDPC*CHSHLL
Trigger: GAGTAGGTGCGAATGGCACCAGCATGGATCGTTCCT...GCACCAGCATGGATCGTTCCTTTCTTGATCATTACTCATGCTTGCCACTGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp GGAAGGATGAGGATGATGAAACTACACAAGGAAGGACGGGTATGTGGGCAACAGCATCAGGGAACTCGATaGGAAAGCCTAGCCCTTGTA +
Preference number: 4 (lower is better)
Translates to: GRMRMMKLHKEGRVCGQQHQGTR*ESLALV
Trigger: TACAAGGGCTAGGCTTTCCCATCGAGTTCCCTGATG...CTGTTGCCCACATACCCGTCCTTCCTTGTGTAGTTTCATCATCCTCATCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGATAGCAGCCAATCTTTaGGCTCAGGGCATTTTGGAA +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWIAANL*AQGILE
Trigger: TTCCAAAATGCCCTGAGCCCAAAGATTGGCTGCTAT...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTCTTTGTCTCCTAGCATaGAAAAGGCAGGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTLCLLA*KRQAVR
Trigger: CCTCACTGCCTGCCTTTTCCATGCTAGGAGACAAAG...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGAGGGGAGAGGGGAAATaGGCATTTGCCTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSERGEGK*AFASLG
Trigger: TCCAAGTGAGGCAAATGCCCATTTCCCCTCTCCCCT...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCGCTGTCTCGATGTCCTaGACCTATGGTTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESAVSMS*TYGSFH
Trigger: ATGGAAAGAACCATAGGTCCAGGACATCGAGACAGC...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000545497.5
3UTR CAA 72 bp GGCTGCGACGAGTCCAGGCCCATGTCATCGAGTTCTTaGGTCAACAGTTTACGATGTAGGTTTATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GCDESRPMSSSS*VNSLRCRFMLA
Trigger: TGCCAACATAAACCTACATCGTAAACTGTTGACCAAAGAACTCGATGACATGGGCCTGGACTCGTCGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411752.5
ENST00000484726.5
3UTR CAA 72 bp AGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTaGCACATGATCCCACCATTGCTCCCAGACAAGCTG +
Preference number: 4 (lower is better)
Translates to: RVPLLLYILWQM*HMIPPLLPDKL
Trigger: CAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACAAGAGCATCAGGCTGCTaGTGTCAAACACGACGTTGG +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTRASGC*CQTRRW
Trigger: CCAACGTCGTGTTTGACATCAGCAGCCTGATGCTCT...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TTGCTGTACATTTTGTGGCAAATGTTGCACATGATCCCACCATTGCTCCCAGACAGAGCATCAGGCTGCTaGTGTCAAACACGACGTTGG +
Preference number: 4 (lower is better)
Translates to: LLYILWQMLHMIPPLLPDRASGC*CQTRRW
Trigger: CCAACGTCGTGTTTGACATCAGCAGCCTGATGCTCT...GTCTGGGAGCAATGGTGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGAACCGCAGAAACTGCTaGAGGGTGATGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRNRRNC*RVMISS
Trigger: AGAGGAAATCATCACCCTTCAGCAGTTTCTGCGGTT...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCCCACCATTGCTTTGCTGTTCTCTAAGTaGGCAAGGAGGCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: PLVAVHFVANVAHDPTIALLFSK*ARRLGL
Trigger: GAGTCCCAGCCTCCTTGCTCACTTAGAGAACAGCAA...AGCAATGGTGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TACATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCTTGCTGTTCTCTAAGTaGGCAAGGAGGCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: YINAHTHTHTHTPQVHKRLLFSK*ARRLGL
Trigger: GAGTCCCAGCCTCCTTGCTCACTTAGAGAACAGCAA...GCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GGTGCTCAAGTCAAGGACCATGTAGTCCTCTGCCATGCCTCTCCCATACCCGTTTCATTATATTCATTCTaGGTTGAAAGGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: GAQVKDHVVLCHASPIPVSLYSF*VERLGS
Trigger: GGAACCCAGCCTTTCAACTCAGAATGAATATAATGA...AACGGGTATGGGAGAGGCATGGCAGAGGACTACATGGTCCTTGACTTGAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCGGATGGCCTCAATTTaGGATGTATCAACCCCACAA +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRRMASI*DVSTPQ
Trigger: TTGTGGGGTTGATACATCTCAAATTGAGGCCATCCG...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380667.6
CDS-3UTR TCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGTTTTGGTTAGATCACTaGCTGGGGCAGAATTCTGAA +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWFWLDH*LGQNSE
Trigger: TTCAGAATTCTGCCCCAGTCAGTGATCTAACCAAAA...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CCATTTATGGTGAGCAACACTCCAGCTACAGGAAATATGCGACTCGTCTGGGACCCGATGAATCCGGAATaGGCTTTTTGGGTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: PFMVSNTPATGNMRLVWDPMNPE*AFWVFS
Trigger: ACTGAACACCCAAAAAGCTCATTCCGGATTCATCGG...GTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGTGTTGCTCACCATAAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp ACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTCTTAGCATAGGCATGTaGAGGCGAGGATTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: THTPQVHKRTLTMAVQTRLSIGM*RRGLGF
Trigger: AAACCCCAATCCTCGCCTTCACATGCCTATGCTAAG...ACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGATTTTGTACTTGCTATaGCAGGGGTGGCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CWAPYIFTKNSSRRSLLRILYLL*QGWQLL
Trigger: CAGGAGCTGCCACCCCTGTCATAGCAAGTACAAAAT...CCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp ACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCGTCGGCCAGGGCTTGTaGGTGCCAGATTTGATTTTG +
Preference number: 4 (lower is better)
Translates to: TLRVPLLLYILWQMLHMIVGQGL*VPDLIL
Trigger: CAAAATCAAATCTGGCACTCACAAGCCCTGGCCGAC...GATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGCATGGCTCATGTCATTaGCCACAGCTCCACCATCAT +
Preference number: 4 (lower is better)
Translates to: CWAPYIFTKNSSRRSLLRHGSCH*PQLHHH
Trigger: ATGATGGTGGAGCTGTGGTCAATGACATGAGCCATG...CCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCCCACCATTGCTTCACTCACTTCGCTGTaGATGTGCTCATCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PLVAVHFVANVAHDPTIASLTSL*MCSSPS
Trigger: GGAAGGGGATGAGCACATTCACAGCGAAGTGAGTGA...AGCAATGGTGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCCCATGGAGATTAGGGTTCTaGCTGTGCCGATTTCGGCTT +
Preference number: 4 (lower is better)
Translates to: LRVPLLLYILWQMLHMIPWRLGF*LCRFRL
Trigger: AAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCA...TGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACATGGAGATTAGGGTTCTaGCTGTGCCGATTTCGGCTT +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTWRLGF*LCRFRL
Trigger: AAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCA...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GCCCCGTCAATGTCATCGAGAAGAATCCCCTCATCGCTGCCTGCGTCGGATTCTCTGAGACTAATCTACTaGAGTGAAGGGAATGTTTTT +
Preference number: 4 (lower is better)
Translates to: APSMSSRRIPSSLPASDSLRLIY*SEGNVF
Trigger: AAAAACATTCCCTTCACTTCAGTAGATTAGTCTCAG...AGAATCCGACGCAGGCAGCGATGAGGGGATTCTTCTCGATGACATTGACGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GAGGAATGGATACTGCTGCTGGACTGGAGGCTGGAGGTGGTGCTCAAGTCAAGGCTGAGACTAATCTACTaGAGTGAAGGGAATGTTTTT +
Preference number: 4 (lower is better)
Translates to: EEWILLLDWRLEVVLKSRLRLIY*SEGNVF
Trigger: AAAAACATTCCCTTCACTTCAGTAGATTAGTCTCAG...CCTTGACTTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTATCCATTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGCTGATGAAAACACTGTaGTCCCTCCAGTCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLLMKTL*SLQSFW
Trigger: CCAGAAAGACTGGAGGGATCACAGTGTTTTCATCAG...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGGAGAGAGAGAGAGACTaGCTGATTGTGGATGTGTGT +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLERERD*LIVDVC
Trigger: ACACACATCCACAATCAGTCAGTCTCTCTCTCTCTC...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp TCCTCTTTCTCACTCTCAATTGCTTGGTTTCAGGCTTGCTTTCATTTCTCTCTGCCGTCCTCACCCCTCTaGCCTTCATGTACCCAGGTT +
Preference number: 4 (lower is better)
Translates to: SSFSLSIAWFQACFHFSLPSSPL*PSCTQV
Trigger: AACCTGGGTACATGAAGGTCAGAGGGGTGAGGACGG...CAGAGAGAAATGAAAGCAAGCCTGAAACCAAGCAATTGAGAGTGAGAAAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGAAGTACAGACTTTaGTTCTGCGGCAGGCTTATT +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHLKYRL*FCGRLI
Trigger: AATAAGCCTGCCGCAGAATCAAAGTCTGTACTTCAA...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp TACATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCCACTTCTGCCTCTTCTaGCATCTCGGCATGCTGGTT +
Preference number: 4 (lower is better)
Translates to: YINAHTHTHTHTPQVHKRHFCLF*HLGMLV
Trigger: AACCAGCATGCCGAGATGTCAGAAGAGGCAGAAGTG...GCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545497.5
CDS-3UTR GCA 90 bp ACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTTGCAGTACCTCCTCTTaGTTCAGGACGCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: THTPQVHKRTLTMAVQTRCSTSS*FRTLKR
Trigger: TCTCTTCAGCGTCCTGAAGCAAGAGGAGGTACTGCA...ACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TCCTCTTTCTCACTCTCAATTGCTTGGTTTCAGGCTTGCTTTCATTTCTCTCTGGTCCAGCCAAGGCCGTaGAGTATGTGCAGTACCTCC +
Preference number: 4 (lower is better)
Translates to: SSFSLSIAWFQACFHFSLVQPRP*SMCSTS
Trigger: GGAGGTACTGCACATACTGCACGGCCTTGGCTGGAC...CAGAGAGAAATGAAAGCAAGCCTGAAACCAAGCAATTGAGAGTGAGAAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATGAATGCTGGAAGGATTaGTGTTCTCTAAGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHECWKD*CSLSEQ
Trigger: TTGCTCACTTAGAGAACAGCAATCCTTCCAGCATTC...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGGAATGCTGGAAGGATTaGTGTTCTCTAAGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWECWKD*CSLSEQ
Trigger: TTGCTCACTTAGAGAACAGCAATCCTTCCAGCATTC...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGTATGCTGGCCAGTCTTaGTCACTAAGCCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSEYAGQS*SLSLSS
Trigger: AGAGGACAGGCTTAGTGAGCAAGACTGGCCAGCATA...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000484726.5
CDS-3UTR GCA 90 bp CTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCCCATATGCTGGCCAGTCTTaGTCACTAAGCCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LRVPLLLYILWQMLHMIPYAGQS*SLSLSS
Trigger: AGAGGACAGGCTTAGTGAGCAAGACTGGCCAGCATA...TGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR GCA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTTGGGACCTTGAAATATaGTGGCCAGTCTTGCTCACT +
Preference number: 4 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTWDLEI*WPVLLT
Trigger: AGTGAGCAAGACTGGCCAGCATATTTCAAGGTCCCA...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACAAGTCCTTCACAGACATaGCTGGGCTCATCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTSPSQT*LGSSPL
Trigger: AAGAGGAGATGAGCCCAGGCATGTCTGTGAAGGACT...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGAGAACTTTTGAGGGCTaGCATAATTCAGAGACGATG +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWRTFEG*HNSETM
Trigger: CATCGTCTCTGAATTATGGCAGCCCTCAAAAGTTCT...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGACTTGCAACCAGCCACTGTaGAGACGTGCATCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KHVGHLVRAGICSVHSETCNQPL*RRASLS
Trigger: TGAAAGAGATGCACGTCTGCACAGTGGCTGGTTGCA...AGTCTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACATGTAGTCCTCTGCCATaGCTCTCCCATACCCGTTCA +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTCSPLP*LSHTRS
Trigger: TGAACGGGTATGGGAGAGGCATGGCAGAGGACTACA...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TTTGTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGGAGGCTGGAGGTGGTaGTCAAGTCAAGGACCATGT +
Preference number: 4 (lower is better)
Translates to: FVVHSQGPLVAVHFVANVGGWRW*SSQGPC
Trigger: ACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCC...AACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GTGTGTGTGTATGTGCATGTGTGTGTGTGTGTGTTTAAAGGGGTACTCTGTTTTGAATCCCCTCATCGCTaGCTGCGTCGGATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VCVYVHVCVCVFKGVLCFESPHR*LRRILW
Trigger: CCAGAGAATCCGACGCAGGCAGCGATGAGGGGATTC...AAAACAGAGTACCCCTTTAAACACACACACACACACATGCACATACACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGGGGACTTTGCACTTGTaGATTTCTCTCAAATGCACA +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWGTLHL*ISLKCT
Trigger: TGTGCATTTGAGAGAAATGCACAAGTGCAAAGTCCC...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCACCAAAAATGCAACCTGGGACTTTaGACTTGTGCATTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: FPDIEPHGVLGTIYLHQKCNLGL*TCAFLS
Trigger: TGAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCA...TTTTTGGTGAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GGGCTGCGACGAGTCCAGGCCCATGTCATCGAGTTCTTTGGTCAACAGTTTACGAGGAAAACATCATATTaGAACCTGGGACTTTGCACT +
Preference number: 4 (lower is better)
Translates to: GLRRVQAHVIEFFGQQFTRKTSY*NLGLCT
Trigger: AGTGCAAAGTCCCAGGTTGCAATATGATGTTTTCCT...CGTAAACTGTTGACCAAAGAACTCGATGACATGGGCCTGGACTCGTCGCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CCATTTATGGTGAGCAACACTCCAGCTACAGGAAATATGCGACTCGTCTGGGACGCCCTCATTCTCATTTaGTTGGCACATATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PFMVSNTPATGNMRLVWDALILI*LAHIWG
Trigger: ACCCCAGATATGTGCCAAGCAAATGAGAATGAGGGC...GTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGTGTTGCTCACCATAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGCTATCTTCTCTGAGATaGGCTGCGGGAAGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSELSSLR*AAGRLE
Trigger: TTCCAACCTTCCCGCAGCGCATCTCAGAGAAGATAG...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTAGTCCTTGCTCAAAGTaGTTTTCTTCCCAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTSPCSK*FSSQSP
Trigger: TGGGGACTGGGAAGAAAAGCACTTTGAGCAAGGACT...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTATACCTCATGAATCATaGTTCTCGCAGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTIPHES*FSQWPQ
Trigger: CTGTGGCCACTGCGAGAAGCATGATTCATGAGGTAT...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp CACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAATGCTGTGTTTCACTTTCAGGGTTTCATGTaGCACCCAGCCATGTTTACA +
Preference number: 4 (lower is better)
Translates to: HTQDTAQYKAAGKNAVFHFQGFM*HPAMFT
Trigger: TGTAAACATGGCTGGGTGGCACATGAAACCCTGAAA...GTGAAACACAGCATTCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468187.6
ENST00000471301.3
CDS-3UTR GCA 90 bp CATTGCCCCACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAATGCTGGTAGAATGCATTCAGTaGTACCATGAAACCATTCTG +
Preference number: 4 (lower is better)
Translates to: HCPTPRTLHSIRQPERMLVECIQ*YHETIL
Trigger: CAGAATGGTTTCATGGTAGCACTGAATGCATTCTAC...CAGCATTCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTGGGGCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468187.6
ENST00000471301.3
CDS-3UTR GCA 90 bp CTTCCTCATTGCCCCACACCCAGGACACTGCACAGTATAAGGCAGCCGGAAAGAGTAGAATGCATTCAGTaGTACCATGAAACCATTCTG +
Preference number: 4 (lower is better)
Translates to: LPHCPTPRTLHSIRQPERVECIQ*YHETIL
Trigger: CAGAATGGTTTCATGGTAGCACTGAATGCATTCTAC...TCTTTCCGGCTGCCTTATACTGTGCAGTGTCCTGGGTGTGGGGCAATGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468187.6
ENST00000471301.3
CDS-3UTR CCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGCAACGGATGGCCTGTTaGGACATTCTGAATAAGAGG +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLQRMAC*DILNKR
Trigger: CCTCTTATTCAGAATGTCCCAACAGGCCATCCGTTG...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCGCTCCACAATGGATTTaGTTTCTCCAAACCGCAGAA +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESAPQWI*FLQTAE
Trigger: TTCTGCGGTTTGGAGAAACCAAATCCATTGTGGAGC...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGGCAGCTGAACCAAAGTTTGCACAGGAAAGCAAATGCACCATATACTAGAAATTATGTGGAGGTGGGGTaGGCCCAAGGTGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: GQLNQSLHRKANAPYTRNYVEVG*AQGVPS
Trigger: AGATGGCACACCTTGGGCCCACCCCACCTCCACATA...ATTTCTAGTATATGGTGCATTTGCTTTCCTGTGCAAACTTTGGTTCAGCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp TACATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCGTAATTAAGGCTATGTaGAGGTGGGGTGGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: YINAHTHTHTHTPQVHKRVIKAM*RWGGPK
Trigger: CTTGGGCCCACCCCACCTCCACATAGCCTTAATTAC...GCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000484726.5
CDS-3UTR CCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCGACCTTGAAATATGCTaGCCAGTCTTGCTCACTAAG +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESDLEIC*PVLLTK
Trigger: CTTAGTGAGCAAGACTGGCCAGCATATTTCAAGGTC...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000484726.5
CDS-3UTR CCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACAGGGCAGAATTCTGAATaGGAGAGACACAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTGQNSE*ERHRLA
Trigger: AGCCAGCCTGTGTCTCTCCCATTCAGAATTCTGCCC...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCAATGATGGGACTGGTTaGGAGGGAGGTTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: TLRVPLLLYILWQMLHMINDGTG*EGGWRT
Trigger: AGTCCTCCAACCTCCCTCCCAACCAGTCCCATCATT...GATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTATGGTACCACTGGTTaGAATGATGGGACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHYGTTG*NDGTGW
Trigger: CCAACCAGTCCCATCATTCCAACCAGTGGTACCATA...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGTATGGTACCACTGGTTaGAATGATGGGACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LLPDKLLNIRDPETSAPRYGTTG*NDGTGW
Trigger: CCAACCAGTCCCATCATTCCAACCAGTGGTACCATA...CCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCCTTCACAGACATGCCTaGGCTCATCTCCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: TLRVPLLLYILWQMLHMILHRHA*AHLLLG
Trigger: TCCCAAGAGGAGATGAGCCCAGGCATGTCTGTGAAG...GATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGTCCCGCTCAGGTTCTTaGTCTTCAGAAGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSESRSGS*SSEVML
Trigger: CAGCATGACTTCTGAAGACCAAGAACCTGAGCGGGA...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ATGTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATATTCCTCGCCCAGTTTaGGCTCCGAAGACTCAGACT +
Preference number: 4 (lower is better)
Translates to: MLHMIPPLLPDKLLNIRDIPRPV*APKTQT
Trigger: AGTCTGAGTCTTCGGAGCCCAAACTGGGCGAGGAAT...ATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTTGTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTAGCCCCATGGGGTGCTaGGCACCATATATCTTCACC +
Preference number: 4 (lower is better)
Translates to: FVVHSQGPLVAVHFVANVSPMGC*APYIFT
Trigger: GGTGAAGATATATGGTGCCCAGCACCCCATGGGGCT...AACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TCTTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCACCAAACATCATATTGCAACCTaGGACTTTGCACTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: SSLTSSPMGCWAPYIFTKHHIAT*DFALVH
Trigger: ATGCACAAGTGCAAAGTCCCAGGTTGCAATATGATG...TTTGGTGAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGAAAGCGGTTTTCTGGTaGCCAACAAATTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRKAVFW*PTNWPV
Trigger: CACAGGCCAATTTGTTGGCCACCAGAAAACCGCTTT...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp GCTACAGTGGCAAGCATGAGTAATGATCAAGAAAGGAACGATCCATGCTGGTGCTGTCCACTTAATAGCTaGAGAGGGCATCGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: ATVASMSNDQERNDPCWCCPLNS*RGHREA
Trigger: TGCCTCTCGATGCCCTCTCCAGCTATTAAGTGGACA...GCACCAGCATGGATCGTTCCTTTCTTGATCATTACTCATGCTTGCCACTGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATGTCCTTAAGCATCCCTaGTATTTTAGAGTTAAGGGG +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHVLKHP*YFRVKG
Trigger: CCCCTTAACTCTAAAATACCAGGGATGCTTAAGGAC...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp GCTACAGTGGCAAGCATGAGTAATGATCAAGAAAGGAACGATCCATGCTGGTGCGCACCGATTCACAGATaGGGTAGAGGATGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: ATVASMSNDQERNDPCWCAPIHR*GRGCFV
Trigger: GACAAAGCATCCTCTACCCCATCTGTGAATCGGTGC...GCACCAGCATGGATCGTTCCTTTCTTGATCATTACTCATGCTTGCCACTGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp ACTCCAGCTACAGGAAATATGCGACTCGTCTGGGACAGATCAAACATGACCTTAGCAGCAAGGACTTCATaGAAGAAGCCAGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: TPATGNMRLVWDRSNMTLAARTS*KKPGKV
Trigger: CACCTTGCCTGGCTTCTTCCATGAAGTCCTTGCTGC...TAAGGTCATGTTTGATCTGTCCCAGACGAGTCGCATATTTCCTGTAGCTGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp TTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCCCTAGGGATGTAGGTTTATGTTaGCAGGAGATGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LLPDKLLNIRDPETSAPRDVGLC*QEMQAV
Trigger: GACAGCCTGCATCTCCTGCCAACATAAACCTACATC...CCTAGGGGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418777.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ATGTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATTGTCTTGCATCCAGCTaGGCCAGCAGGAGGTCATTA +
Preference number: 4 (lower is better)
Translates to: MLHMIPPLLPDKLLNIRDCLASS*ASRRSL
Trigger: TAATGACCTCCTGCTGGCCCAGCTGGATGCAAGACA...ATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484726.5
3UTR CAA 72 bp TGTCAACTAATTGCCTTTGCTCGAACCCAAGAGTCCTaGCTCAAAGTGCTTTTCTTCCCAGTCCCCACACTG +
Preference number: 4 (lower is better)
Translates to: CQLIAFARTQES*LKVLFFPVPTL
Trigger: CAGTGTGGGGACTGGGAAGAAAAGCACTTTGAGCAAGGACTCTTGGGTTCGAGCAAAGGCAATTAGTTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp GGGCAGCTGAACCAAAGTTTGCACAGGAAAGCAAATGCACCATATACTAGAAATACAGGTGCTGCGTGCTaGGCTTATCCAAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: GQLNQSLHRKANAPYTRNTGAAC*AYPRHV
Trigger: CACATGCCTTGGATAAGCTCAGCACGCAGCACCTGT...ATTTCTAGTATATGGTGCATTTGCTTTCCTGTGCAAACTTTGGTTCAGCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp AAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGACTAACCGCAGAAACTGCTaGAGGGTGATGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KHVGHLVRAGICSVHSETNRRNC*RVMISS
Trigger: AGAGGAAATCATCACCCTTCAGCAGTTTCTGCGGTT...AGTCTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGTCATTATATTCATTCTaGGTTGAAAGGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWSLYSF*VERLGS
Trigger: GGAACCCAGCCTTTCAACTCAGAATGAATATAATGA...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp ACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTCCGATGAATCCGGAATaGGCTTTTTGGGTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: THTPQVHKRTLTMAVQTRPMNPE*AFWVFS
Trigger: ACTGAACACCCAAAAAGCTCATTCCGGATTCATCGG...ACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCTGGTGCATCGATGTTTaGTCTTCAGGTGAACAGCAT +
Preference number: 4 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVWCIDV*SSGEQH
Trigger: ATGCTGTTCACCTGAAGATCAAACATCGATGCACCA...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGTGTGAGTGCCAGATTTaGTTTTGTACTTGCTATGAC +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWCECQI*FCTCYD
Trigger: GTCATAGCAAGTACAAAATCAAATCTGGCACTCACA...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCCCACCTTATTTCAGTCCTTaGAATGCACCGGGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LRVPLLLYILWQMLHMIPPYFSP*NAPGPV
Trigger: AACAGGACCCGGTGCATTTCAAGGACTGAAATAAGG...TGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GGGCAGCTGAACCAAAGTTTGCACAGGAAAGCAAATGCACCATATACTAGAAATTTGATGACGTCCTGGTaGGAGGGCTCACTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GQLNQSLHRKANAPYTRNLMTSW*EGSLWF
Trigger: GAACCACAGTGAGCCCTCTCACCAGGACGTCATCAA...ATTTCTAGTATATGGTGCATTTGCTTTCCTGTGCAAACTTTGGTTCAGCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp TACATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCTGGAGATTAGGGTTCTaGCTGTGCCGATTTCGGCTT +
Preference number: 4 (lower is better)
Translates to: YINAHTHTHTHTPQVHKRWRLGF*LCRFRL
Trigger: AAGCCGAAATCGGCACAGTCAGAACCCTAATCTCCA...GCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTGAAACTTCAGCCTACATAAGCGCACACTaGCTATGGCAGTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: PPLLPDKLLNIRDPETSAYISAH*LWQFKH
Trigger: GTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTA...GGCTGAAGTTTCAGGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTACATAAGCGCACACTaGCTATGGCAGTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLYISAH*LWQFKH
Trigger: GTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTA...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATGGCCTGTGGTTATGTTaGGTGACTAATTGTATTTTC +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHGLWLC*VTNCIF
Trigger: GAAAATACAATTAGTCACTCAACATAACCACAGGCC...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTAATGACCATTTATGGTaGGCAACACTCCAGCTACAG +
Preference number: 4 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTNDHLW*ATLQLQ
Trigger: CTGTAGCTGGAGTGTTGCTCACCATAAATGGTCATT...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGGAGCATCATACCTCATaGATCATGCTTCTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSEEHHTS*IMLLAV
Trigger: CACTGCGAGAAGCATGATTCATGAGGTATGATGCTC...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATCTACCAACGTCACAATaGTTAGATCAGGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHLPTSQ*LDQGDA
Trigger: TGCATCACCCTGATCTAATCATTGTGACGTTGGTAG...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp GGGCTGCGACGAGTCCAGGCCCATGTCATCGAGTTCTTTGGTCAACAGTTTACGGATGGGCTACAAAAATaGGCATCTCAAATAAATGGT +
Preference number: 4 (lower is better)
Translates to: GLRRVQAHVIEFFGQQFTDGLQK*ASQING
Trigger: ACCATTTATTTGAGATGCTCATTTTTGTAGCCCATC...CGTAAACTGTTGACCAAAGAACTCGATGACATGGGCCTGGACTCGTCGCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR GCA 90 bp ACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTCTTATCCAAGGCATGTaGCACCCAGCCATGTTTACA +
Preference number: 4 (lower is better)
Translates to: THTPQVHKRTLTMAVQTRLIQGM*HPAMFT
Trigger: TGTAAACATGGCTGGGTGGCACATGCCTTGGATAAG...ACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACATGCAGTACCTCCTCTTaGTTCAGGACGCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTCSTSS*FRTLKR
Trigger: TCTCTTCAGCGTCCTGAAGCAAGAGGAGGTACTGCA...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCTGCAGTACCTCCTCTTaGTTCAGGACGCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TLRVPLLLYILWQMLHMICSTSS*FRTLKR
Trigger: TCTCTTCAGCGTCCTGAAGCAAGAGGAGGTACTGCA...GATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCGAATGCTGGAAGGATTaGTGTTCTCTAAGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESECWKD*CSLSEQ
Trigger: TTGCTCACTTAGAGAACAGCAATCCTTCCAGCATTC...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCACCAAAAAGAATGCTGGAAGGATTaGTGTTCTCTAAGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: FPDIEPHGVLGTIYLHQKECWKD*CSLSEQ
Trigger: TTGCTCACTTAGAGAACAGCAATCCTTCCAGCATTC...TTTTTGGTGAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CATCGAGTTCTTTGGTCAACAGTTTACGATGTAGGTTTATGTTGGCACTGTGTCTGTGCCATCTCGGCATaGTGGTTGTCAAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HRVLWSTVYDVGLCWHCVCAISA*WLSSAA
Trigger: GGCTGCACTTGACAACCAGCATGCCGAGATGGCACA...GACACAGTGCCAACATAAACCTACATCGTAAACTGTTGACCAAAGAACTCGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR GCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACATATGCTGGCCAGTCTTaGTCACTAAGCCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTYAGQS*SLSLSS
Trigger: AGAGGACAGGCTTAGTGAGCAAGACTGGCCAGCATA...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000484726.5
CDS-3UTR GCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACACTAGGGAGAGGATTTTaGAAGACAGGGTCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTLGRGF*KTGSRG
Trigger: CCCTCTAGACCCTGTCTTGCAAAATCCTCTCCCTAG...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGTTTCAGTCCTTGAAATaGACCGGGTCCTGTTATGCT +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRFQSLK*TGSCYA
Trigger: AGCATAACAGGACCCGGTGCATTTCAAGGACTGAAA...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCACCAAAAAAGAACTTTTGAGGGCTaGCATAATTCAGAGACGATG +
Preference number: 4 (lower is better)
Translates to: FPDIEPHGVLGTIYLHQKRTFEG*HNSETM
Trigger: CATCGTCTCTGAATTATGGCAGCCCTCAAAAGTTCT...TTTTTGGTGAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACATGCAACCAGCCACTGTaGAGACGTGCATCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTCNQPL*RRASLS
Trigger: TGAAAGAGATGCACGTCTGCACAGTGGCTGGTTGCA...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GTGTGTGTGTATGTGCATGTGTGTGTGTGTGTGTTTAAAGGGGTACTCTGTTTTGGAGGCTGGAGGTGGTaGTCAAGTCAAGGACCATGT +
Preference number: 4 (lower is better)
Translates to: VCVYVHVCVCVFKGVLCFGGWRW*SSQGPC
Trigger: ACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCC...AAAACAGAGTACCCCTTTAAACACACACACACACACATGCACATACACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACAGAGGAAAACATCATATTGCAACCTGGGACTTTGCACTTGTGCATTTCTCTCGGAGGCTGGAGGTGGTaGTCAAGTCAAGGACCATGT +
Preference number: 4 (lower is better)
Translates to: TEENIILQPGTLHLCISLGGWRW*SSQGPC
Trigger: ACATGGTCCTTGACTTGAGCACCACCTCCAGCCTCC...GAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCAATATGATGTTTTCCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCAGGGTCCCCTTGTTaGTGTACATTTTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHSGSPC*CTFCGK
Trigger: TTTGCCACAAAATGTACAGCAACAAGGGGACCCTGA...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGTCAGGGTCCCCTTGTTaGTGTACATTTTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRSGSPC*CTFCGK
Trigger: TTTGCCACAAAATGTACAGCAACAAGGGGACCCTGA...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTCAGGGTCCCCTTGTTaGTGTACATTTTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLSGSPC*CTFCGK
Trigger: TTTGCCACAAAATGTACAGCAACAAGGGGACCCTGA...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGGGGTGCTGGGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCGGGACTTTGCACTTGTaGATTTCTCTCAAATGCACA +
Preference number: 4 (lower is better)
Translates to: WGAGHHISSPKIHRGGPCGTLHL*ISLKCT
Trigger: TGTGCATTTGAGAGAAATGCACAAGTGCAAAGTCCC...GCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCCCAGCACCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTTCATGCAGCTGTACTTaGTTTCCTAACCCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: THTPQVHKRTLTMAVQTRSCSCT*FPNPFL
Trigger: GAGGAAGGGGTTAGGAAAGCAAGTACAGCTGCATGA...ACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACAGCTACAGGAAATATaGGACTCGTCTGGGACAGAT +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTQLQEI*DSSGTD
Trigger: ATCTGTCCCAGACGAGTCGCATATTTCCTGTAGCTG...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGAATGGTGAGATTCTCTaGAGGGCAGCTGAACCAAAG +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSENGEIL*RAAEPK
Trigger: CTTTGGTTCAGCTGCCCTGCAGAGAATCTCACCATT...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACTGCGGCAGGCTTATTaGAAGAGACTGGTTTTATGC +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTLRQAY*KRLVLC
Trigger: GCATAAAACCAGTCTCTTGCAATAAGCCTGCCGCAG...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCAGGTTAATCTTCCCTaGCTGAAAACATTCACATGT +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWQVNLP*LKTFTC
Trigger: ACATGTGAATGTTTTCAGCCAGGGAAGATTAACCTG...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGCAACAGTCATGGGTACAACAAATTGTCTCTTTGGGGAAGACCAAGAATTATTCAATCTCCACTTGGGTaGGGTGGTACAGGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: GNSHGYNKLSLWGRPRIIQSPLG*GGTGAA
Trigger: CGCAGCACCTGTACCACCCCACCCAAGTGGAGATTG...AATAATTCTTGGTCTTCCCCAAAGAGACAATTTGTTGTACCCATGACTGTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATAAATGCAAGGCTGTTTaGGATGTTTTCGAAGTGATG +
Preference number: 4 (lower is better)
Translates to: RTLTMAVQTRRPSGESWHKCKAV*DVFEVM
Trigger: CATCACTTCGAAAACATCCCAAACAGCCTTGCATTT...ATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp AGTCATGGGTACAACAAATTGTCTCTTTGGGGAAGACCAAGAATTATTCTGTCAAAGGCTATGTGGAGGTaGGGTGGGCCCAAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SHGYNKLSLWGRPRIILSKAMWR*GGPKVC
Trigger: GCACACCTTGGGCCCACCCCACCTCCACATAGCCTT...TGACAGAATAATTCTTGGTCTTCCCCAAAGAGACAATTTGTTGTACCCATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380672.9
ENST00000484726.5
CDS-3UTR CCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGATCAACCCCACAACATaGGACCTTGAAATATGCTGG +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLINPTT*DLEICW
Trigger: CCAGCATATTTCAAGGTCCCATGTTGTGGGGTTGAT...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000484726.5
CDS-3UTR CCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCTGGCAGCTCCTGAGGTaGCCCGAATTAAATCTTTAT +
Preference number: 4 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVWQLLR*PELNLY
Trigger: ATAAAGATTTAATTCGGGCCACCTCAGGAGCTGCCA...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGAAGGATGAGGATGATGAAACTACACAAGGAAGGACGGGTATGTGGGCAACAGCCAGAAAATACTAGCTaGCTAGGGAGAGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: GRMRMMKLHKEGRVCGQQPENTS*LGRGFC
Trigger: GCAAAATCCTCTCCCTAGCCAGCTAGTATTTTCTGG...CTGTTGCCCACATACCCGTCCTTCCTTGTGTAGTTTCATCATCCTCATCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGTATGGTACCACTGGTTaGAATGATGGGACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSEYGTTG*NDGTGW
Trigger: CCAACCAGTCCCATCATTCCAACCAGTGGTACCATA...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ACATCATATTGCAACCTGGGACTTTGCACTTGTGCATTTCTCTCAAATGCACAGTCAGCACTGGGCTCATaGGTGGCCATCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: TSYCNLGLCTCAFLSNAQSALGS*VAIITA
Trigger: AGCAGTGATGATGGCCACCCATGAGCCCAGTGCTGA...CTGTGCATTTGAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCAATATGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp CCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCCCACCATTGCTTCCCGCTCAGGTTCTTaGTCTTCAGAAGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: PLVAVHFVANVAHDPTIASRSGS*SSEVML
Trigger: CAGCATGACTTCTGAAGACCAAGAACCTGAGCGGGA...AGCAATGGTGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TCCTCTTTCTCACTCTCAATTGCTTGGTTTCAGGCTTGCTTTCATTTCTCTCTGACTGGAGGCTGGAGGTaGTGCTCAAGTCAAGGACCA +
Preference number: 4 (lower is better)
Translates to: SSFSLSIAWFQACFHFSLTGGWR*CSSQGP
Trigger: TGGTCCTTGACTTGAGCACCACCTCCAGCCTCCAGT...CAGAGAGAAATGAAAGCAAGCCTGAAACCAAGCAATTGAGAGTGAGAAAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp ATCATATTGCAACCTGGGACTTTGCACTTGTGCATTTCTCTCAAATGCACAGTTATACTGCTGCTGGACTaGAGGCTGGAGGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: IILQPGTLHLCISLKCTVILLLD*RLEVVL
Trigger: GAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGTAT...AACTGTGCATTTGAGAGAAATGCACAAGTGCAAAGTCCCAGGTTGCAATATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACAGATTCTCTGGAGGAATaGATACTGCTGCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTDSLEE*ILLLDW
Trigger: CCAGTCCAGCAGCAGTATCCATTCCTCCAGAGAATC...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTTGTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTCTGCGTCGGATTCTCTaGAGGAATGGATACTGCTGC +
Preference number: 4 (lower is better)
Translates to: FVVHSQGPLVAVHFVANVLRRIL*RNGYCC
Trigger: GCAGCAGTATCCATTCCTCCAGAGAATCCGACGCAG...AACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp TTCCCTGACATCGAGCCCCATGGGGTGCTGGGCACCATATATCTTCACCAAAAACATCATATTGCAACCTaGGACTTTGCACTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: FPDIEPHGVLGTIYLHQKHHIAT*DFALVH
Trigger: ATGCACAAGTGCAAAGTCCCAGGTTGCAATATGATG...TTTTTGGTGAAGATATATGGTGCCCAGCACCCCATGGGGCTCGATGTCAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTTGGTGGCCAACAAATTaGCCTGTGGTTATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTWWPTN*PVVMLS
Trigger: ACTCAACATAACCACAGGCCAATTTGTTGGCCACCA...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp TCCTCTTTCTCACTCTCAATTGCTTGGTTTCAGGCTTGCTTTCATTTCTCTCTGCTGAGGCTGCCGATGTaGTTAACCAGCTCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: SSFSLSIAWFQACFHFSLLRLPM*LTSSGN
Trigger: GTTGCCTGAGCTGGTTAACCACATCGGCAGCCTCAG...CAGAGAGAAATGAAAGCAAGCCTGAAACCAAGCAATTGAGAGTGAGAAAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCCAAGACTACCACGTGTaGTTTATCTCTGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESQDYHV*FISEGK
Trigger: TTTTCCCTCAGAGATAAACCACACGTGGTAGTCTTG...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTACACACCAATGGGTCTaGAGTAAGAAAGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTTHQWV*SKKGVC
Trigger: ACACACACCTTTCTTACTCCAGACCCATTGGTGTGT...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR CCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCGATGTCCTGGACCTATaGTTCTTTCCATCCGTAAAT +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESDVLDL*FFPSVN
Trigger: ATTTACGGATGGAAAGAACCATAGGTCCAGGACATC...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000545497.5
CDS-3UTR CCA 90 bp GGCACCATATATCTTCACCAAAAATTCATCGCGGAGGTCCTTGCTAAGGGAGGGGCTTTGTGGTCTATTTaGTGCACAGTTCTGAAGACG +
Preference number: 4 (lower is better)
Translates to: GTIYLHQKFIAEVLAKGGALWSI*CTVLKT
Trigger: CGTCTTCAGAACTGTGCACCAAATAGACCACAAAGC...CCCTCCCTTAGCAAGGACCTCCGCGATGAATTTTTGGTGAAGATATATGGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484726.5
CDS-3UTR TCA 90 bp TGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTTAATCTTCCCTGGCTaGAAACATTCACATGTGCAG +
Preference number: 4 (lower is better)
Translates to: WQFKHVGHLVRAGICSVHLIFPG*KHSHVQ
Trigger: CTGCACATGTGAATGTTTTCAGCCAGGGAAGATTAA...ATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp GGAAGCATGGCATCCCCTAGTCCCAGAAAGAAGACGCTTGATAGATCTTGCACTTTAATCTTCCCTGGCTaGAAACATTCACATGTGCAG +
Preference number: 4 (lower is better)
Translates to: GSMASPSPRKKTLDRSCTLIFPG*KHSHVQ
Trigger: CTGCACATGTGAATGTTTTCAGCCAGGGAAGATTAA...AGTGCAAGATCTATCAAGCGTCTTCTTTCTGGGACTAGGGGATGCCATGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp GGCAACAGTCATGGGTACAACAAATTGTCTCTTTGGGGAAGACCAAGAATTATTACAGGTGCTGCGTGCTaGGCTTATCCAAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: GNSHGYNKLSLWGRPRIITGAAC*AYPRHV
Trigger: CACATGCCTTGGATAAGCTCAGCACGCAGCACCTGT...AATAATTCTTGGTCTTCCCCAAAGAGACAATTTGTTGTACCCATGACTGTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CACTTAAGTTTTCAAAGAAGCAAAGGATGCCGTCACAGACAGCATCTCTCTACTTTGCCAGCAGCATCCTaGAGGATGTATCCTCGGACA +
Preference number: 4 (lower is better)
Translates to: HLSFQRSKGCRHRQHLSTLPAAS*RMYPRT
Trigger: TGTCCGAGGATACATCCTTCAGGATGCTGCTGGCAA...AGTAGAGAGATGCTGTCTGTGACGGCATCCTTTGCTTCTTTGAAAACTTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACACACAACATGGGACCTTaGAATATGCTGGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTHNMGP*NMLASL
Trigger: AAGACTGGCCAGCATATTTCAAGGTCCCATGTTGTG...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000484726.5
CDS-3UTR TCA 90 bp GTTGCACATGATCCCACCATTGCTCCCAGACAAGCTGCTGAACATAAGAGATCCTTTTGGTTAGATCACTaGCTGGGGCAGAATTCTGAA +
Preference number: 4 (lower is better)
Translates to: VAHDPTIAPRQAAEHKRSFWLDH*LGQNSE
Trigger: TTCAGAATTCTGCCCCAGTCAGTGATCTAACCAAAA...GGATCTCTTATGTTCAGCAGCTTGTCTGGGAGCAATGGTGGGATCATGTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGTTTTGGTTAGATCACTaGCTGGGGCAGAATTCTGAA +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRFWLDH*LGQNSE
Trigger: TTCAGAATTCTGCCCCAGTCAGTGATCTAACCAAAA...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCATCCTTCTCATCCGATaGATCCGGAATGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVILLIR*IRNELF
Trigger: AAAAAGCTCATTCCGGATTCATCGGATGAGAAGGAT...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGATCCTTCTCATCCGATaGATCCGGAATGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLILLIR*IRNELF
Trigger: AAAAAGCTCATTCCGGATTCATCGGATGAGAAGGAT...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTGCACATGATCCCATGGTGCATCGATGTTTaGTCTTCAGGTGAACAGCAT +
Preference number: 4 (lower is better)
Translates to: LRVPLLLYILWQMLHMIPWCIDV*SSGEQH
Trigger: ATGCTGTTCACCTGAAGATCAAACATCGATGCACCA...TGGGATCATGTGCAACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp AAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGACTAATCTACTGAAGTaGAGGGAATGTTTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: KRTLTMAVQTRRPSGESWTNLLK*RECFCG
Trigger: TCCACAAAAACATTCCCTTCACTTCAGTAGATTAGT...CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp ACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTTACATAAGCGCACACTaGCTATGGCAGTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: THTPQVHKRTLTMAVQTRYISAH*LWQFKH
Trigger: GTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTA...ACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGACTCTGTTTTCACCCTaGAATCAAAGATCCCACTCC +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSETLFSP*NQRSHS
Trigger: GGAGTGGGATCTTTGATTTCAGGGTGAAAACAGAGT...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR TCA 90 bp CAAGACTACCACGTGTGGTTTATCTCTGAGGGAAAATGTGAAGAGAAGTTACTTGCCTGGTGCATTTGCTaGTGTGACTGCCGACAGCTA +
Preference number: 4 (lower is better)
Translates to: QDYHVWFISEGKCEEKLLAWCIC*CDCRQL
Trigger: TAGCTGTCGGCAGTCACATCAGCAAATGCACCAGGC...AAGTAACTTCTCTTCACATTTTCCCTCAGAGATAAACCACACGTGGTAGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp ACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTTATTGCCACTTCTCTaGCAAAACACAGGTGAACAC +
Preference number: 4 (lower is better)
Translates to: TLTMAVQTRRPSGESWHLLLPLL*QNTGEH
Trigger: GTGTTCACCTGTGTTTTGTCAGAGAAGTGGCAATAA...CAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR TCA 90 bp TACATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCCAATTAAAACCAAGATaGGGGAGGGCGTGTTCTACC +
Preference number: 4 (lower is better)
Translates to: YINAHTHTHTHTPQVHKRQLKPR*GRACST
Trigger: GGTAGAACACGCCCTCCCTCATCTTGGTTTTAATTG...GCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp ACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTTTAGTATCAGCGTTTTaGCATGTCCCCATGAACCCT +
Preference number: 4 (lower is better)
Translates to: THTPQVHKRTLTMAVQTRLVSAF*HVPMNP
Trigger: AGGGTTCATGGGGACATGGCAAAACGCTGATACTAA...ACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TACATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCCTTATCCAAGGCATGTaGCACCCAGCCATGTTTACA +
Preference number: 4 (lower is better)
Translates to: YINAHTHTHTHTPQVHKRLIQGM*HPAMFT
Trigger: TGTAAACATGGCTGGGTGGCACATGCCTTGGATAAG...GCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TACATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCAGCCTCAACCCTGGTTaGTCTAACAGTAGCCCATTT +
Preference number: 4 (lower is better)
Translates to: YINAHTHTHTHTPQVHKRSLNPG*SNSSPF
Trigger: AAATGGGCTACTGTTAGAGCAACCAGGGTTGAGGCT...GCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTTTAAAGGGGTACTCTGTTTTCACCCTGAAATCAAAGATCGGTGGCCATCATCACTaGTGGCACTACTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: CVCVCLKGYSVFTLKSKIGGHHH*WHYWLR
Trigger: TCTGAGCCAGTAGTGCCAGCAGTGATGATGGCCACC...GATCTTTGATTTCAGGGTGAAAACAGAGTACCCCTTTAAACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGCAATCTTCACAGGCATaGTTGACTTCCTGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSEQSSQA*LTSWAF
Trigger: AAAAGCCCAGGAAGTCAAGCATGCCTGTGAAGATTG...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TTTGTAGTGCACTCTCAGGGTCCCCTTGTTGCTGTACATTTTGTGGCAAATGTTAGTCCTTCACAGACATaGCTGGGCTCATCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FVVHSQGPLVAVHFVANVSPSQT*LGSSPL
Trigger: AAGAGGAGATGAGCCCAGGCATGTCTGTGAAGGACT...AACATTTGCCACAAAATGTACAGCAACAAGGGGACCCTGAGAGTGCACTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp TTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCATTCTGAGCACCGGGTCCTGTTATaGTTAGAAAAGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: FKHVGHLVRAGICSVHSEHRVLL*LEKSFT
Trigger: TGTGAAGGACTTTTCTAAGCATAACAGGACCCGGTG...CTCAGAATGGACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CACACACACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACATTTCAGTCCTTGAAATaGACCGGGTCCTGTTATGCT +
Preference number: 4 (lower is better)
Translates to: HTHTPQVHKRTLTMAVQTFQSLK*TGSCYA
Trigger: AGCATAACAGGACCCGGTGCATTTCAAGGACTGAAA...TGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp GGCAACAGTCATGGGTACAACAAATTGTCTCTTTGGGGAAGACCAAGAATTATTGACCATGTAGTCCTCTaGCATGCCTCTCCCATACCC +
Preference number: 4 (lower is better)
Translates to: GNSHGYNKLSLWGRPRIIDHVVL*HASPIP
Trigger: GGGTATGGGAGAGGCATGGCAGAGGACTACATGGTC...AATAATTCTTGGTCTTCCCCAAAGAGACAATTTGTTGTACCCATGACTGTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ACACAGAGAACGCTGAGAGGACCAAAATGTTTGCAAACAAACTTTCATTATTCTCCCCTCATCGCTGCCTaGGTCGGATTCTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TQRTLRGPKCLQTNFHYSPLIAA*VGFSGG
Trigger: TCCTCCAGAGAATCCGACGCAGGCAGCGATGAGGGG...AGAATAATGAAAGTTTGTTTGCAAACATTTTGGTCCTCTCAGCGTTCTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380672.9
CDS-3UTR GCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCGGGACTTTGCACTTGTaGATTTCTCTCAAATGCACA +
Preference number: 4 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVGTLHL*ISLKCT
Trigger: TGTGCATTTGAGAGAAATGCACAAGTGCAAAGTCCC...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCAGGAAAACATCATATTaGAACCTGGGACTTTGCACT +
Preference number: 4 (lower is better)
Translates to: HKRTLTMAVQTRRPSGESRKTSY*NLGLCT
Trigger: AGTGCAAAGTCCCAGGTTGCAATATGATGTTTTCCT...GCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CACACACCCCAAGTACATAAGCGCACACTGACTATGGCAGTTCAAACACGTAGGCAGAGCATACATAAATaGACACACACACACACACAC +
Preference number: 4 (lower is better)
Translates to: HTPQVHKRTLTMAVQTRRQSIHK*THTHTH
Trigger: GTGTGTGTGTGTGTGTGTGCATTTATGTATGCTCTG...CCTACGTGTTTGAACTGCCATAGTCAGTGTGCGCTTATGTACTTGGGGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp CTATGGCAGTTCAAACACGTAGGCCATCTGGTGAGAGCTGGCATTTGTAGTGTCCAGAGCATACATAAATaGACACACACACACACACAC +
Preference number: 4 (lower is better)
Translates to: LWQFKHVGHLVRAGICSVQSIHK*THTHTH
Trigger: GTGTGTGTGTGTGTGTGTGCATTTATGTATGCTCTG...GACACTACAAATGCCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380667.6
ENST00000380672.9
ENST00000411752.5
ENST00000418777.5
ENST00000484726.5
ENST00000545497.5
CDS-3UTR GCA 90 bp ATAAATGCACACACACACACACACACACACACACCCCAAGTACATAAGCGCACAAAAACTGGGGCTAGTTaGACACTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: INAHTHTHTHTPQVHKRTKTGAS*TLCVCV
Trigger: CACACACACACACAGTGTGCAACTAGCCCCAGTTTT...TGTGCGCTTATGTACTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380672.9
ENST00000411752.5
ENST000004